Citrus Sinensis ID: 015031
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
|---|
Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
ID ![]() | Alignment graph ![]() | Length ![]() |
Definition ![]() |
RBH(Q2H) ![]() |
RBH(H2Q) ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 414 | 2.2.26 [Sep-21-2011] | |||||||
| Q56YU0 | 501 | Aldehyde dehydrogenase fa | yes | no | 0.995 | 0.822 | 0.736 | 0.0 | |
| P27463 | 509 | Retinal dehydrogenase 1 O | yes | no | 0.980 | 0.797 | 0.561 | 1e-136 | |
| Q9SU63 | 538 | Aldehyde dehydrogenase fa | no | no | 1.0 | 0.769 | 0.548 | 1e-136 | |
| P86886 | 500 | Retinal dehydrogenase 1 O | N/A | no | 0.985 | 0.816 | 0.546 | 1e-135 | |
| P24549 | 501 | Retinal dehydrogenase 1 O | yes | no | 0.980 | 0.810 | 0.546 | 1e-135 | |
| P51977 | 501 | Retinal dehydrogenase 1 O | N/A | no | 0.980 | 0.810 | 0.549 | 1e-134 | |
| P00352 | 501 | Retinal dehydrogenase 1 O | yes | no | 0.985 | 0.814 | 0.539 | 1e-134 | |
| P48644 | 501 | Retinal dehydrogenase 1 O | yes | no | 0.980 | 0.810 | 0.549 | 1e-134 | |
| Q8MI17 | 496 | Retinal dehydrogenase 1 O | yes | no | 0.985 | 0.822 | 0.553 | 1e-134 | |
| Q8HYE4 | 501 | Retinal dehydrogenase 1 O | N/A | no | 0.985 | 0.814 | 0.534 | 1e-133 |
| >sp|Q56YU0|AL2C4_ARATH Aldehyde dehydrogenase family 2 member C4 OS=Arabidopsis thaliana GN=ALDH2C4 PE=1 SV=2 | Back alignment and function desciption |
|---|
Score = 643 bits (1658), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 304/413 (73%), Positives = 355/413 (85%), Gaps = 1/413 (0%)
Query: 3 KFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMSR- 61
KFADLIEE+ E LA L+A+D GKL K DIP A RY AGAADKIHGE LKM+R
Sbjct: 89 KFADLIEENIEELAKLDAVDGGKLFQLGKYADIPATAGHFRYNAGAADKIHGETLKMTRQ 148
Query: 62 ALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLA 121
+L GYTL+EPIGVVG+IIPWNFP+ MF KV+PA+AAGCTM+VKPAEQT L AL++AHL+
Sbjct: 149 SLFGYTLKEPIGVVGNIIPWNFPSIMFATKVAPAMAAGCTMVVKPAEQTSLSALFYAHLS 208
Query: 122 KLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLE 181
K AG+PDGVLN+V GFG TAGAAIASHMD+DKVSFTGSTDVGR++MQAAA SNLK VSLE
Sbjct: 209 KEAGIPDGVLNIVTGFGSTAGAAIASHMDVDKVSFTGSTDVGRKIMQAAAASNLKKVSLE 268
Query: 182 LGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKA 241
LGGKSPLLIF+D D++ AAD+ALLG +NKGEICVASSRV+VQEGIYD+ +KLVEKAK
Sbjct: 269 LGGKSPLLIFNDADIDKAADLALLGCFYNKGEICVASSRVFVQEGIYDKVVEKLVEKAKD 328
Query: 242 WVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIGKKGYYIEPTIFTN 301
W VGDPFD RQGPQVDK+QF++ILSYIEHGK EGATLLTGGK IG KGY+I+PTIF +
Sbjct: 329 WTVGDPFDSTARQGPQVDKRQFEKILSYIEHGKNEGATLLTGGKAIGDKGYFIQPTIFAD 388
Query: 302 VTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSIRA 361
VTEDM I ++EIFGPVM+LMKFKTVEE IK ANNT+YGLAAGI+++D+++ NTVSRSI+A
Sbjct: 389 VTEDMKIYQDEIFGPVMSLMKFKTVEEGIKCANNTKYGLAAGILSQDIDLINTVSRSIKA 448
Query: 362 GIIWINCYFAFDSDCPYGGYKMSGFGRDCGLESLHNYLQVKSVVTPIFNSPWL 414
GIIW+NCYF FD DCPYGGYKMSG R+ G+++L NYLQ KSVV P+ NSPW+
Sbjct: 449 GIIWVNCYFGFDLDCPYGGYKMSGNCRESGMDALDNYLQTKSVVMPLHNSPWM 501
|
Involved in ferulic acid and sinapic acid biosynthesis by oxidation of conyferylaldehyde and sinapaldehyde, respectively. Can oxidize L-lactaldehyde. Possesses activity on acetaldehyde and glycolaldehyde in vitro. Arabidopsis thaliana (taxid: 3702) EC: 1EC: .EC: 2EC: .EC: 1EC: .EC: 3 |
| >sp|P27463|AL1A1_CHICK Retinal dehydrogenase 1 OS=Gallus gallus GN=ALDH1A1 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 486 bits (1252), Expect = e-136, Method: Compositional matrix adjust.
Identities = 228/406 (56%), Positives = 298/406 (73%)
Query: 3 KFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMSRA 62
K ADL+E LA +EA+D GKL S A + D+ T+RY AG ADKIHG + M
Sbjct: 99 KLADLVERDRLTLATMEAIDGGKLFSTAYLMDLGACIKTIRYCAGWADKIHGRTVPMDGN 158
Query: 63 LQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAK 122
+T EP+GV G IIPWNFP MF K++PAL G T++VKPAEQTPL ALY L K
Sbjct: 159 FFTFTRHEPVGVCGQIIPWNFPLVMFIWKIAPALCCGNTVVVKPAEQTPLSALYMGSLIK 218
Query: 123 LAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLEL 182
AG P GV+N+VPGFGPTAGAAI+ HMDIDKVSFTGST+VG+ + +AA +NLK V+LEL
Sbjct: 219 EAGFPPGVVNIVPGFGPTAGAAISHHMDIDKVSFTGSTEVGKLIKEAAGKTNLKRVTLEL 278
Query: 183 GGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAW 242
GGKSP +IF D D++ AA+ A +G+ +++G+ C+A SR++V+E IYDEF ++ +E+AK +
Sbjct: 279 GGKSPNIIFADADLDEAAEFAHIGLFYHQGQCCIAGSRIFVEEPIYDEFVRRSIERAKKY 338
Query: 243 VVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIGKKGYYIEPTIFTNV 302
+GDP P V+QGPQ+DK+QF +IL IE GK+EGA L GG P G KGY+I+PT+F+NV
Sbjct: 339 TLGDPLLPGVQQGPQIDKEQFQKILDLIESGKKEGAKLECGGGPWGNKGYFIQPTVFSNV 398
Query: 303 TEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSIRAG 362
T+DM IAK EIFGPV +MKFKT++E IK ANNT YGLAA + TKD++ A T + +++AG
Sbjct: 399 TDDMRIAKEEIFGPVQQIMKFKTIDEVIKRANNTTYGLAAAVFTKDIDKALTFASALQAG 458
Query: 363 IIWINCYFAFDSDCPYGGYKMSGFGRDCGLESLHNYLQVKSVVTPI 408
+W+NCY AF + CP+GG+KMSG GR+ G L Y +VK+V I
Sbjct: 459 TVWVNCYSAFSAQCPFGGFKMSGNGRELGEYGLQEYTEVKTVTIKI 504
|
Binds free retinal and cellular retinol-binding protein-bound retinal. Can convert/oxidize retinaldehyde to retinoic acid. Gallus gallus (taxid: 9031) EC: 1 EC: . EC: 2 EC: . EC: 1 EC: . EC: 3 EC: 6 |
| >sp|Q9SU63|AL2B4_ARATH Aldehyde dehydrogenase family 2 member B4, mitochondrial OS=Arabidopsis thaliana GN=ALDH2B4 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 485 bits (1249), Expect = e-136, Method: Compositional matrix adjust.
Identities = 227/414 (54%), Positives = 301/414 (72%)
Query: 1 MLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMS 60
+L+FADL+E+H+E LA LE D GK + + +IP A RYYAG ADKIHG +
Sbjct: 125 LLRFADLVEKHSEELASLETWDNGKPYQQSLTAEIPMFARLFRYYAGWADKIHGLTIPAD 184
Query: 61 RALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHL 120
Q +TL EPIGV G IIPWNFP MF KV PALA G T+++K AEQTPL A Y L
Sbjct: 185 GNYQVHTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLTAFYAGKL 244
Query: 121 AKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSL 180
AG+P GVLN+V GFG TAGAA+ASHMD+DK++FTGSTD G+ ++ AA SNLKPV+L
Sbjct: 245 FLEAGLPPGVLNIVSGFGATAGAALASHMDVDKLAFTGSTDTGKVILGLAANSNLKPVTL 304
Query: 181 ELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAK 240
ELGGKSP ++F+D D++ A ++A + FN+G+ C A SR +V E +YDEF +K +A
Sbjct: 305 ELGGKSPFIVFEDADIDKAVELAHFALFFNQGQCCCAGSRTFVHEKVYDEFVEKSKARAL 364
Query: 241 AWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIGKKGYYIEPTIFT 300
VVGDPF + QGPQ+D KQF++++ YI+ G ATL GG IG KGY+I+PT+F+
Sbjct: 365 KRVVGDPFRKGIEQGPQIDLKQFEKVMKYIKSGIESNATLECGGDQIGDKGYFIQPTVFS 424
Query: 301 NVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSIR 360
NV +DMLIA++EIFGPV +++KF V+E IK AN T+YGLAAG+ TK+L+ AN VSR+++
Sbjct: 425 NVKDDMLIAQDEIFGPVQSILKFSDVDEVIKRANETKYGLAAGVFTKNLDTANRVSRALK 484
Query: 361 AGIIWINCYFAFDSDCPYGGYKMSGFGRDCGLESLHNYLQVKSVVTPIFNSPWL 414
AG +W+NC+ FD+ P+GGYKMSG GR+ G+ SL+NYLQ+K+VVT + W+
Sbjct: 485 AGTVWVNCFDVFDAAIPFGGYKMSGNGREKGIYSLNNYLQIKAVVTALNKPAWI 538
|
Possesses activity on acetaldehyde and glycolaldehyde in vitro. Arabidopsis thaliana (taxid: 3702) EC: 1 EC: . EC: 2 EC: . EC: 1 EC: . EC: 3 |
| >sp|P86886|AL1A1_MESAU Retinal dehydrogenase 1 OS=Mesocricetus auratus GN=ALDH1A1 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 480 bits (1236), Expect = e-135, Method: Compositional matrix adjust.
Identities = 223/408 (54%), Positives = 302/408 (74%)
Query: 1 MLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMS 60
+ K ADL+E +LA LEA + GK+ + + + D+ G L+Y AG ADK+HG+ +
Sbjct: 88 LYKLADLMERDRLLLATLEATNGGKVFASSYLFDLGGCIKALKYCAGWADKVHGQTIPSD 147
Query: 61 RALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHL 120
+ YT REPIGV G IIPWNFP MF K+ PAL G T+IVKPAEQTPL ALY A L
Sbjct: 148 GDIFTYTRREPIGVCGQIIPWNFPLLMFIWKIGPALGCGNTVIVKPAEQTPLTALYMASL 207
Query: 121 AKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSL 180
K AG P GV+N+VPG+GPTAGAAI+SHMDIDKV+FTGST VG+ + +AA SNLK V+L
Sbjct: 208 IKEAGFPPGVVNIVPGYGPTAGAAISSHMDIDKVAFTGSTQVGKLIKEAAGKSNLKRVTL 267
Query: 181 ELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAK 240
ELGGKSP ++F D D++TA + A G+ +++G+ CVA+SR++V+E IYDEF ++ VE+AK
Sbjct: 268 ELGGKSPCIVFADADLDTAVEFAHYGVFYHQGQCCVAASRLFVEESIYDEFVRRSVERAK 327
Query: 241 AWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIGKKGYYIEPTIFT 300
+V+G+P + + QGPQ+DK+Q D+IL IE GK+EGA L GG G KGY+++PT+F+
Sbjct: 328 KYVLGNPLNSGINQGPQIDKEQHDKILDLIESGKKEGAKLECGGGRWGNKGYFVQPTVFS 387
Query: 301 NVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSIR 360
NVT+DM IAK EIFGPV +MKFK++++ IK ANNT YGLAAG+ TKDL+ A TVS +++
Sbjct: 388 NVTDDMRIAKEEIFGPVQQIMKFKSLDDVIKRANNTSYGLAAGVFTKDLDKAITVSSALQ 447
Query: 361 AGIIWINCYFAFDSDCPYGGYKMSGFGRDCGLESLHNYLQVKSVVTPI 408
AG++W+NCY + CP+GG+KMSG GR+ G ++ Y ++K+V I
Sbjct: 448 AGVVWVNCYMMLSAQCPFGGFKMSGNGRELGEHGIYEYTELKTVAIKI 495
|
Binds free retinal and cellular retinol-binding protein-bound retinal. Can convert/oxidize retinaldehyde to retinoic acid. Mesocricetus auratus (taxid: 10036) EC: 1 EC: . EC: 2 EC: . EC: 1 EC: . EC: 3 EC: 6 |
| >sp|P24549|AL1A1_MOUSE Retinal dehydrogenase 1 OS=Mus musculus GN=Aldh1a1 PE=1 SV=5 | Back alignment and function description |
|---|
Score = 480 bits (1235), Expect = e-135, Method: Compositional matrix adjust.
Identities = 222/406 (54%), Positives = 302/406 (74%)
Query: 3 KFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMSRA 62
K ADL+E +LA +EAL+ GK+ + A + D+ G L+Y AG ADKIHG+ +
Sbjct: 91 KLADLMERDRLLLATMEALNGGKVFANAYLSDLGGCIKALKYCAGWADKIHGQTIPSDGD 150
Query: 63 LQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAK 122
+ YT REPIGV G IIPWNFP MF K+ PAL+ G T++VKPAEQTPL AL+ A L K
Sbjct: 151 IFTYTRREPIGVCGQIIPWNFPMLMFIWKIGPALSCGNTVVVKPAEQTPLTALHLASLIK 210
Query: 123 LAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLEL 182
AG P GV+N+VPG+GPTAGAAI+SHMD+DKV+FTGST VG+ + +AA SNLK V+LEL
Sbjct: 211 EAGFPPGVVNIVPGYGPTAGAAISSHMDVDKVAFTGSTQVGKLIKEAAGKSNLKRVTLEL 270
Query: 183 GGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAW 242
GGKSP ++F D D++ A + A G+ +++G+ CVA+SR++V+E +YDEF K+ VE+AK +
Sbjct: 271 GGKSPCIVFADADLDIAVEFAHHGVFYHQGQCCVAASRIFVEESVYDEFVKRSVERAKKY 330
Query: 243 VVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIGKKGYYIEPTIFTNV 302
V+G+P P + QGPQ+DK+Q D+IL IE GK+EGA L GG G KG++++PT+F+NV
Sbjct: 331 VLGNPLTPGINQGPQIDKEQHDKILDLIESGKKEGAKLECGGGRWGNKGFFVQPTVFSNV 390
Query: 303 TEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSIRAG 362
T++M IAK EIFGPV +MKFK+V++ IK ANNT YGLAAG+ TKDL+ A TVS +++AG
Sbjct: 391 TDEMRIAKEEIFGPVQQIMKFKSVDDVIKRANNTTYGLAAGLFTKDLDKAITVSSALQAG 450
Query: 363 IIWINCYFAFDSDCPYGGYKMSGFGRDCGLESLHNYLQVKSVVTPI 408
++W+NCY + CP+GG+KMSG GR+ G L+ Y ++K+V I
Sbjct: 451 VVWVNCYMMLSAQCPFGGFKMSGNGRELGEHGLYEYTELKTVAMKI 496
|
In addition to the activity on acetaldehyde and related substrates, is also involved in the oxidation of aldehydes derived from biogenic amines such as epinephrine and norepinephrine, as well as the aldehydes generated via lipid peroxidation. Binds free retinal and cellular retinol-binding protein-bound retinal. Can convert/oxidize retinaldehyde to retinoic acid. Mus musculus (taxid: 10090) EC: 1 EC: . EC: 2 EC: . EC: 1 EC: . EC: 3 EC: 6 |
| >sp|P51977|AL1A1_SHEEP Retinal dehydrogenase 1 OS=Ovis aries GN=ALDH1A1 PE=1 SV=2 | Back alignment and function description |
|---|
Score = 479 bits (1233), Expect = e-134, Method: Compositional matrix adjust.
Identities = 223/406 (54%), Positives = 299/406 (73%)
Query: 3 KFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMSRA 62
K ADLIE +LA +EA++ GKL S A + D+ G TLRY AG ADKI G + M
Sbjct: 91 KLADLIERDRLLLATMEAMNGGKLFSNAYLMDLGGCIKTLRYCAGWADKIQGRTIPMDGN 150
Query: 63 LQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAK 122
YT EP+GV G IIPWNFP MF K+ PAL+ G T++VKPAEQTPL AL+ L K
Sbjct: 151 FFTYTRSEPVGVCGQIIPWNFPLLMFLWKIGPALSCGNTVVVKPAEQTPLTALHMGSLIK 210
Query: 123 LAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLEL 182
AG P GV+N+VPG+GPTAGAAI+SHMD+DKV+FTGST+VG+ + +AA SNLK VSLEL
Sbjct: 211 EAGFPPGVVNIVPGYGPTAGAAISSHMDVDKVAFTGSTEVGKLIKEAAGKSNLKRVSLEL 270
Query: 183 GGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAW 242
GGKSP ++F D D++ A + A G+ +++G+ C+A+SR++V+E IYDEF ++ VE+AK +
Sbjct: 271 GGKSPCIVFADADLDNAVEFAHQGVFYHQGQCCIAASRLFVEESIYDEFVRRSVERAKKY 330
Query: 243 VVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIGKKGYYIEPTIFTNV 302
V+G+P P V QGPQ+DK+Q+++IL IE GK+EGA L GG P G KGY+I+PT+F++V
Sbjct: 331 VLGNPLTPGVSQGPQIDKEQYEKILDLIESGKKEGAKLECGGGPWGNKGYFIQPTVFSDV 390
Query: 303 TEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSIRAG 362
T+DM IAK EIFGPV +MKFK++++ IK ANNT YGL+AGI T D++ A TVS ++++G
Sbjct: 391 TDDMRIAKEEIFGPVQQIMKFKSLDDVIKRANNTFYGLSAGIFTNDIDKAITVSSALQSG 450
Query: 363 IIWINCYFAFDSDCPYGGYKMSGFGRDCGLESLHNYLQVKSVVTPI 408
+W+NCY + CP+GG+KMSG GR+ G H Y +VK+V I
Sbjct: 451 TVWVNCYSVVSAQCPFGGFKMSGNGRELGEYGFHEYTEVKTVTIKI 496
|
Binds free retinal and cellular retinol-binding protein-bound retinal. Can convert/oxidize retinaldehyde to retinoic acid. Ovis aries (taxid: 9940) EC: 1 EC: . EC: 2 EC: . EC: 1 EC: . EC: 3 EC: 6 |
| >sp|P00352|AL1A1_HUMAN Retinal dehydrogenase 1 OS=Homo sapiens GN=ALDH1A1 PE=1 SV=2 | Back alignment and function description |
|---|
Score = 479 bits (1233), Expect = e-134, Method: Compositional matrix adjust.
Identities = 220/408 (53%), Positives = 301/408 (73%)
Query: 1 MLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMS 60
+ K ADLIE +LA +E+++ GKL+S A + D+ G TLRY AG ADKI G + +
Sbjct: 89 LYKLADLIERDRLLLATMESMNGGKLYSNAYLNDLAGCIKTLRYCAGWADKIQGRTIPID 148
Query: 61 RALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHL 120
YT EPIGV G IIPWNFP M K+ PAL+ G T++VKPAEQTPL AL+ A L
Sbjct: 149 GNFFTYTRHEPIGVCGQIIPWNFPLVMLIWKIGPALSCGNTVVVKPAEQTPLTALHVASL 208
Query: 121 AKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSL 180
K AG P GV+N+VPG+GPTAGAAI+SHMDIDKV+FTGST+VG+ + +AA SNLK V+L
Sbjct: 209 IKEAGFPPGVVNIVPGYGPTAGAAISSHMDIDKVAFTGSTEVGKLIKEAAGKSNLKRVTL 268
Query: 181 ELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAK 240
ELGGKSP ++ D D++ A + A G+ +++G+ C+A+SR++V+E IYDEF ++ VE+AK
Sbjct: 269 ELGGKSPCIVLADADLDNAVEFAHHGVFYHQGQCCIAASRIFVEESIYDEFVRRSVERAK 328
Query: 241 AWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIGKKGYYIEPTIFT 300
+++G+P P V QGPQ+DK+Q+D+IL IE GK+EGA L GG P G KGY+++PT+F+
Sbjct: 329 KYILGNPLTPGVTQGPQIDKEQYDKILDLIESGKKEGAKLECGGGPWGNKGYFVQPTVFS 388
Query: 301 NVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSIR 360
NVT++M IAK EIFGPV +MKFK++++ IK ANNT YGL+AG+ TKD++ A T+S +++
Sbjct: 389 NVTDEMRIAKEEIFGPVQQIMKFKSLDDVIKRANNTFYGLSAGVFTKDIDKAITISSALQ 448
Query: 361 AGIIWINCYFAFDSDCPYGGYKMSGFGRDCGLESLHNYLQVKSVVTPI 408
AG +W+NCY + CP+GG+KMSG GR+ G H Y +VK+V I
Sbjct: 449 AGTVWVNCYGVVSAQCPFGGFKMSGNGRELGEYGFHEYTEVKTVTVKI 496
|
Binds free retinal and cellular retinol-binding protein-bound retinal. Can convert/oxidize retinaldehyde to retinoic acid. Homo sapiens (taxid: 9606) EC: 1 EC: . EC: 2 EC: . EC: 1 EC: . EC: 3 EC: 6 |
| >sp|P48644|AL1A1_BOVIN Retinal dehydrogenase 1 OS=Bos taurus GN=ALDH1A1 PE=2 SV=3 | Back alignment and function description |
|---|
Score = 479 bits (1233), Expect = e-134, Method: Compositional matrix adjust.
Identities = 223/406 (54%), Positives = 299/406 (73%)
Query: 3 KFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMSRA 62
K ADLIE +LA +EA++ GKL S A + D+ G TLRY AG ADKI G + M
Sbjct: 91 KLADLIERDHLLLATMEAMNGGKLFSNAYLMDLGGCIKTLRYCAGWADKIQGRTIPMDGN 150
Query: 63 LQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAK 122
YT EP+GV G IIPWNFP MF K+ PAL+ G T++VKPAEQTPL AL+ L K
Sbjct: 151 FFTYTRSEPVGVCGQIIPWNFPLLMFLWKIGPALSCGNTVVVKPAEQTPLTALHMGSLIK 210
Query: 123 LAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLEL 182
AG P GV+N+VPG+GPTAGAAI+SHMD+DKV+FTGST+VG+ + +AA SNLK VSLEL
Sbjct: 211 EAGFPPGVVNIVPGYGPTAGAAISSHMDVDKVAFTGSTEVGKLIKEAAGKSNLKRVSLEL 270
Query: 183 GGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAW 242
GGKSP ++F D D++ A + A G+ +++G+ C+A+SR++V+E IYDEF ++ VE+AK +
Sbjct: 271 GGKSPCIVFADADLDNAVEFAHQGVFYHQGQCCIAASRLFVEESIYDEFVRRSVERAKKY 330
Query: 243 VVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIGKKGYYIEPTIFTNV 302
V+G+P P V QGPQ+DK+Q+++IL IE GK+EGA L GG P G KGY+I+PT+F++V
Sbjct: 331 VLGNPLTPGVSQGPQIDKEQYEKILDLIESGKKEGAKLECGGGPWGNKGYFIQPTVFSDV 390
Query: 303 TEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSIRAG 362
T+DM IAK EIFGPV +MKFK++++ IK ANNT YGL+AGI T D++ A TVS ++++G
Sbjct: 391 TDDMRIAKEEIFGPVQQIMKFKSLDDVIKRANNTFYGLSAGIFTNDIDKAITVSSALQSG 450
Query: 363 IIWINCYFAFDSDCPYGGYKMSGFGRDCGLESLHNYLQVKSVVTPI 408
+W+NCY + CP+GG+KMSG GR+ G H Y +VK+V I
Sbjct: 451 TVWVNCYSVVSAQCPFGGFKMSGNGRELGEYGFHEYTEVKTVTIKI 496
|
Binds free retinal and cellular retinol-binding protein-bound retinal. Can convert/oxidize retinaldehyde to retinoic acid. Bos taurus (taxid: 9913) EC: 1 EC: . EC: 2 EC: . EC: 1 EC: . EC: 3 EC: 6 |
| >sp|Q8MI17|AL1A1_RABIT Retinal dehydrogenase 1 OS=Oryctolagus cuniculus GN=ALDH1A1 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 478 bits (1229), Expect = e-134, Method: Compositional matrix adjust.
Identities = 226/408 (55%), Positives = 300/408 (73%)
Query: 1 MLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMS 60
+ K ADLIE +LA +E+L+AGKL A + D+ G TLRY AG ADKI G + M
Sbjct: 84 LYKLADLIERDRLLLATMESLNAGKLFPNAYLMDLGGCIKTLRYCAGWADKIQGRTMPMD 143
Query: 61 RALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHL 120
YT EP+GV G IIPWNFP M K+ PAL+ G T+IVKPAEQTPL AL+ A L
Sbjct: 144 GDFFCYTRHEPVGVCGQIIPWNFPLVMLIWKIGPALSCGNTVIVKPAEQTPLTALHVASL 203
Query: 121 AKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSL 180
K AG P GV+N+VPG+GPTAGAAI+SHMDIDKV+FTGST+VG+ + +AA SNLK V+L
Sbjct: 204 IKEAGFPPGVVNIVPGYGPTAGAAISSHMDIDKVAFTGSTEVGKLIKEAAGKSNLKRVTL 263
Query: 181 ELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAK 240
ELGGKSP ++F D D++ A + A G+ +++G+ C+A+SR++V+E IYDEF ++ VE+AK
Sbjct: 264 ELGGKSPCIVFADADLDNAVEFAHQGVFYHQGQCCIAASRLFVEESIYDEFVRRSVERAK 323
Query: 241 AWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIGKKGYYIEPTIFT 300
+V+G+P P V QGPQ+DK+Q+++IL IE GK+EGA L GG P G KGY+I+PT+F+
Sbjct: 324 KYVLGNPLAPEVNQGPQIDKEQYNKILDLIESGKKEGAKLECGGGPWGNKGYFIQPTVFS 383
Query: 301 NVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSIR 360
NVT++M IAK EIFGPV +MKFK++++ IK ANNT YGL+AGI TKDL+ A TVS +++
Sbjct: 384 NVTDEMRIAKEEIFGPVQQIMKFKSLDDVIKRANNTTYGLSAGIFTKDLDKAVTVSSALQ 443
Query: 361 AGIIWINCYFAFDSDCPYGGYKMSGFGRDCGLESLHNYLQVKSVVTPI 408
AG +W+NCY + P+GG+KMSG GR+ G L Y +VK+V I
Sbjct: 444 AGTVWVNCYSVVSAQVPFGGFKMSGNGRELGEYGLQQYTEVKTVTVKI 491
|
Can convert/oxidize retinaldehyde to retinoic acid. Oryctolagus cuniculus (taxid: 9986) EC: 1 EC: . EC: 2 EC: . EC: 1 EC: . EC: 3 EC: 6 |
| >sp|Q8HYE4|AL1A1_MACFA Retinal dehydrogenase 1 OS=Macaca fascicularis GN=ALDH1A1 PE=2 SV=3 | Back alignment and function description |
|---|
Score = 476 bits (1224), Expect = e-133, Method: Compositional matrix adjust.
Identities = 218/408 (53%), Positives = 299/408 (73%)
Query: 1 MLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMS 60
+ K ADLIE +LA +E+++ GKL+S A + D+ G TLRY AG ADKI G + +
Sbjct: 89 LYKLADLIERDRLLLATMESMNGGKLYSNAYLNDLAGCIKTLRYCAGWADKIQGRTIPID 148
Query: 61 RALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHL 120
YT EPIGV G IIPWNFP M K+ PAL+ G T++VKPAEQTPL AL+ A L
Sbjct: 149 GNFFTYTRHEPIGVCGQIIPWNFPLVMLIWKIGPALSCGNTVVVKPAEQTPLTALHVASL 208
Query: 121 AKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSL 180
K AG P GV+N+VPG+GPTAGAAI+SHMDIDKV+FTGST+VG+ + +AA SNLK V+L
Sbjct: 209 IKEAGFPPGVVNIVPGYGPTAGAAISSHMDIDKVAFTGSTEVGKLIKEAAGKSNLKRVTL 268
Query: 181 ELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAK 240
ELGGKSP ++ D D++ A + A G+ +++G+ C+A+SR++V+E IYDEF ++ VE+AK
Sbjct: 269 ELGGKSPCIVLADADLDNAVEFAHHGVFYHQGQCCIAASRIFVEESIYDEFVRRSVERAK 328
Query: 241 AWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIGKKGYYIEPTIFT 300
+++G+P P QGPQ+DK+Q+D+IL IE GK+EGA L GG P G KGY+++PT+F+
Sbjct: 329 KYILGNPLTPGATQGPQIDKEQYDKILDLIESGKKEGAKLECGGGPWGNKGYFVQPTVFS 388
Query: 301 NVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSIR 360
NVT++M IAK EIFGPV +MKFK++++ IK ANNT YGL+AG+ T D++ A T+S +++
Sbjct: 389 NVTDEMRIAKEEIFGPVQQIMKFKSLDDVIKRANNTFYGLSAGVFTNDIDKAVTISSALQ 448
Query: 361 AGIIWINCYFAFDSDCPYGGYKMSGFGRDCGLESLHNYLQVKSVVTPI 408
AG +W+NCY + CP+GG+KMSG GR+ G H Y +VK+V I
Sbjct: 449 AGTVWVNCYGVVTAQCPFGGFKMSGNGRELGEYGFHEYTEVKTVTVKI 496
|
Binds free retinal and cellular retinol-binding protein-bound retinal. Can convert/oxidize retinaldehyde to retinoic acid. Macaca fascicularis (taxid: 9541) EC: 1 EC: . EC: 2 EC: . EC: 1 EC: . EC: 3 EC: 6 |
Close Homologs in the Non-Redundant Database Detected by BLAST 
Original result of BLAST against Nonredundant Database
GI ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 414 | ||||||
| 255546541 | 501 | aldehyde dehydrogenase, putative [Ricinu | 1.0 | 0.826 | 0.823 | 0.0 | |
| 255546535 | 501 | aldehyde dehydrogenase, putative [Ricinu | 1.0 | 0.826 | 0.801 | 0.0 | |
| 356520525 | 501 | PREDICTED: aldehyde dehydrogenase family | 1.0 | 0.826 | 0.801 | 0.0 | |
| 356531249 | 501 | PREDICTED: aldehyde dehydrogenase family | 1.0 | 0.826 | 0.794 | 0.0 | |
| 388495142 | 497 | unknown [Lotus japonicus] | 1.0 | 0.832 | 0.794 | 0.0 | |
| 356513129 | 502 | PREDICTED: aldehyde dehydrogenase family | 1.0 | 0.824 | 0.782 | 0.0 | |
| 357500461 | 502 | Aldehyde dehydrogenase [Medicago truncat | 1.0 | 0.824 | 0.814 | 0.0 | |
| 357518719 | 503 | Aldehyde dehydrogenase [Medicago truncat | 1.0 | 0.823 | 0.775 | 0.0 | |
| 356531251 | 499 | PREDICTED: aldehyde dehydrogenase family | 1.0 | 0.829 | 0.763 | 0.0 | |
| 356523743 | 501 | PREDICTED: aldehyde dehydrogenase family | 1.0 | 0.826 | 0.777 | 0.0 |
| >gi|255546541|ref|XP_002514330.1| aldehyde dehydrogenase, putative [Ricinus communis] gi|223546786|gb|EEF48284.1| aldehyde dehydrogenase, putative [Ricinus communis] | Back alignment and taxonomy information |
|---|
Score = 721 bits (1862), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 341/414 (82%), Positives = 379/414 (91%)
Query: 1 MLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMS 60
M++FADLI+E+ E LA L+ +D GKL S K DIP AANTLRYYAGAADKIHGEVLKMS
Sbjct: 88 MMRFADLIDENKEELAALDTIDGGKLFSGGKTVDIPSAANTLRYYAGAADKIHGEVLKMS 147
Query: 61 RALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHL 120
RALQGYTLREPIGVVGHIIPWNFP+ MFFMKV+PALAAGCT IVKPAEQTPL AL++AHL
Sbjct: 148 RALQGYTLREPIGVVGHIIPWNFPSLMFFMKVAPALAAGCTTIVKPAEQTPLSALFYAHL 207
Query: 121 AKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSL 180
AKLAG+PDGVLNVV G+GPTAGAAIASHMDID VSFTGST+VGR+VMQAAATSNLK VSL
Sbjct: 208 AKLAGLPDGVLNVVTGYGPTAGAAIASHMDIDMVSFTGSTEVGRKVMQAAATSNLKQVSL 267
Query: 181 ELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAK 240
ELGGKSPLLIFDD D+NTA+D+AL GIL+NKGE+CVASSRVYVQEGIYDE KKLVEKAK
Sbjct: 268 ELGGKSPLLIFDDADINTASDLALFGILYNKGEVCVASSRVYVQEGIYDEIVKKLVEKAK 327
Query: 241 AWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIGKKGYYIEPTIFT 300
AWVVGDPFDP V QGPQVDK+Q+++ILSYIEH K EGATLLTGGK + +KGYYIEPTIF
Sbjct: 328 AWVVGDPFDPKVHQGPQVDKQQYEKILSYIEHAKGEGATLLTGGKSLFEKGYYIEPTIFA 387
Query: 301 NVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSIR 360
++ EDMLI K+EIFGPVM+LMKFKT+EEAIK AN+TRYGLAAGI+TKDLN+ANTV+RSIR
Sbjct: 388 DLQEDMLIVKDEIFGPVMSLMKFKTIEEAIKRANDTRYGLAAGIVTKDLNIANTVARSIR 447
Query: 361 AGIIWINCYFAFDSDCPYGGYKMSGFGRDCGLESLHNYLQVKSVVTPIFNSPWL 414
AG+IW+NCYFAFD DCPYGGYK SGFGRD GLE+LH YLQVKSVVTPI+NSPWL
Sbjct: 448 AGVIWVNCYFAFDQDCPYGGYKTSGFGRDFGLEALHKYLQVKSVVTPIYNSPWL 501
|
Source: Ricinus communis Species: Ricinus communis Genus: Ricinus Family: Euphorbiaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|255546535|ref|XP_002514327.1| aldehyde dehydrogenase, putative [Ricinus communis] gi|223546783|gb|EEF48281.1| aldehyde dehydrogenase, putative [Ricinus communis] | Back alignment and taxonomy information |
|---|
Score = 710 bits (1833), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 332/414 (80%), Positives = 377/414 (91%)
Query: 1 MLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMS 60
+++FAD+IEEH E LA ++ +DAGKL + K DIP A N LRYYAGAADKIHG+VLKMS
Sbjct: 88 LMEFADIIEEHIEELAAIDTIDAGKLFTMGKAADIPMAINLLRYYAGAADKIHGQVLKMS 147
Query: 61 RALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHL 120
R LQGYTL EP+GVVGHIIPWNFPT MFFMKV+PALAAGCTM+VKPAEQTPL ALY+AHL
Sbjct: 148 RELQGYTLHEPVGVVGHIIPWNFPTNMFFMKVAPALAAGCTMVVKPAEQTPLSALYYAHL 207
Query: 121 AKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSL 180
AK AG+PDGV+NV+ GFGPTAGAAIASHMDIDKVSFTGST+VGR++MQAAATSNLK VSL
Sbjct: 208 AKQAGIPDGVINVITGFGPTAGAAIASHMDIDKVSFTGSTEVGRKIMQAAATSNLKQVSL 267
Query: 181 ELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAK 240
ELGGKSPLLIFDD D++TA D+ALLGIL+NKGE+CVASSRVYVQEGIYDE KKL +KAK
Sbjct: 268 ELGGKSPLLIFDDADIDTAVDLALLGILYNKGEVCVASSRVYVQEGIYDELVKKLEKKAK 327
Query: 241 AWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIGKKGYYIEPTIFT 300
WVVGDPFDP R GPQVDK+QFD+IL YIEHGK+EGATLLTGGKP G KGYY+ PTIFT
Sbjct: 328 DWVVGDPFDPISRLGPQVDKQQFDKILYYIEHGKKEGATLLTGGKPSGNKGYYLHPTIFT 387
Query: 301 NVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSIR 360
+V EDM+IAK+EIFGPVM+LMKFKT++EAI+ ANNT+YGLAAGI+TK+L+VANTVSRSIR
Sbjct: 388 DVKEDMMIAKDEIFGPVMSLMKFKTIDEAIERANNTKYGLAAGIVTKNLDVANTVSRSIR 447
Query: 361 AGIIWINCYFAFDSDCPYGGYKMSGFGRDCGLESLHNYLQVKSVVTPIFNSPWL 414
AGIIWINCYF FD+DCP+GGYKMSGFGRD GL++LH YLQVKSVVTPI+NSPWL
Sbjct: 448 AGIIWINCYFVFDNDCPFGGYKMSGFGRDLGLDALHKYLQVKSVVTPIYNSPWL 501
|
Source: Ricinus communis Species: Ricinus communis Genus: Ricinus Family: Euphorbiaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|356520525|ref|XP_003528912.1| PREDICTED: aldehyde dehydrogenase family 2 member C4-like [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 706 bits (1821), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 332/414 (80%), Positives = 376/414 (90%)
Query: 1 MLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMS 60
M+K+ADLI+++ E +A L+A+DAGKL+ W K DIP AANT+RYYAGAADKIHGEVLK S
Sbjct: 88 MMKWADLIDQNIEEIAALDAIDAGKLYHWCKAVDIPAAANTIRYYAGAADKIHGEVLKAS 147
Query: 61 RALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHL 120
R YTL EPIGVVGHIIPWNFP+TMF KVSP+LAAGCTM++KPAEQTPL AL++AHL
Sbjct: 148 REFHAYTLLEPIGVVGHIIPWNFPSTMFVAKVSPSLAAGCTMVLKPAEQTPLSALFYAHL 207
Query: 121 AKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSL 180
AKLAG+PDGVLNVVPGFG TAGAAI+SHMDIDKVSFTGST+VGR+VM+AAA SNLKPVSL
Sbjct: 208 AKLAGIPDGVLNVVPGFGQTAGAAISSHMDIDKVSFTGSTEVGREVMRAAANSNLKPVSL 267
Query: 181 ELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAK 240
ELGGKSP+++FDD DV+ AA +AL+GILFNKGEICVA SRV VQEGIYDEFEKKLVEKA
Sbjct: 268 ELGGKSPVIVFDDADVDKAAGLALMGILFNKGEICVAGSRVLVQEGIYDEFEKKLVEKAN 327
Query: 241 AWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIGKKGYYIEPTIFT 300
AWVVGDPFDP V+QGPQVDKKQF++ILSYIEHGK+EGATLLTGGK +G KGYYIEPTIF+
Sbjct: 328 AWVVGDPFDPKVQQGPQVDKKQFEKILSYIEHGKKEGATLLTGGKRVGNKGYYIEPTIFS 387
Query: 301 NVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSIR 360
NV EDMLI ++EIFGPVMALMKFKT+E+AIK ANNTRYGLA+GI+TK L+ ANTVSRSIR
Sbjct: 388 NVKEDMLIVQDEIFGPVMALMKFKTIEDAIKIANNTRYGLASGIVTKSLDTANTVSRSIR 447
Query: 361 AGIIWINCYFAFDSDCPYGGYKMSGFGRDCGLESLHNYLQVKSVVTPIFNSPWL 414
AGI+WINCYFAF D PYGGYKMSGFGRD G+E+LH YLQVKSVVTPI+NSPWL
Sbjct: 448 AGIVWINCYFAFGDDIPYGGYKMSGFGRDFGMEALHKYLQVKSVVTPIYNSPWL 501
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|356531249|ref|XP_003534190.1| PREDICTED: aldehyde dehydrogenase family 2 member C4-like [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 701 bits (1808), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 329/414 (79%), Positives = 376/414 (90%)
Query: 1 MLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMS 60
M+K+ADL++++ E +A L+A+DAGKL+ W K DIP AA+T+RYYAGAADKIHGEVLK S
Sbjct: 88 MMKWADLVDQNIEEIAALDAIDAGKLYHWCKAVDIPAAASTIRYYAGAADKIHGEVLKAS 147
Query: 61 RALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHL 120
R YTL EPIGVVGHIIPWNFP+TMF KVSP+LAAGCTM++KPAEQTPL AL++AHL
Sbjct: 148 REFHAYTLLEPIGVVGHIIPWNFPSTMFVAKVSPSLAAGCTMVLKPAEQTPLSALFYAHL 207
Query: 121 AKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSL 180
AKLAG+PDGVLNVVPGFG TAG AI+ HMDIDKVSFTGST+VGR+VM+AAA SNLKPVSL
Sbjct: 208 AKLAGIPDGVLNVVPGFGQTAGVAISLHMDIDKVSFTGSTEVGREVMRAAANSNLKPVSL 267
Query: 181 ELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAK 240
ELGGKSP+++FDD DV+ AA++ALLGILFNKGEICVA SRV VQEGIYDEFEKKLVEKAK
Sbjct: 268 ELGGKSPVIVFDDADVDKAAELALLGILFNKGEICVAGSRVLVQEGIYDEFEKKLVEKAK 327
Query: 241 AWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIGKKGYYIEPTIFT 300
AWVVGDPFDP V+QGPQVDKKQF++ILSYIE GK+EGATLLTGGK +G KGYYIEPTIF+
Sbjct: 328 AWVVGDPFDPKVQQGPQVDKKQFEKILSYIEQGKKEGATLLTGGKRVGNKGYYIEPTIFS 387
Query: 301 NVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSIR 360
NV EDMLI ++EIFGPVMALMKFKT+E+AIK ANNTRYGLA+GI+TK L+ ANTVSRSIR
Sbjct: 388 NVKEDMLIVQDEIFGPVMALMKFKTIEDAIKIANNTRYGLASGIVTKSLDTANTVSRSIR 447
Query: 361 AGIIWINCYFAFDSDCPYGGYKMSGFGRDCGLESLHNYLQVKSVVTPIFNSPWL 414
AGI+WINCYFAF +D PYGGYKMSGFGRD G+E+LH YLQVKSVVTPI+NSPWL
Sbjct: 448 AGIVWINCYFAFGNDIPYGGYKMSGFGRDFGMEALHKYLQVKSVVTPIYNSPWL 501
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|388495142|gb|AFK35637.1| unknown [Lotus japonicus] | Back alignment and taxonomy information |
|---|
Score = 699 bits (1803), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 329/414 (79%), Positives = 373/414 (90%)
Query: 1 MLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMS 60
M+K ADLI+E+ E LA L+A+DAGKL+ K DIPGAA TLRY+AGAADKIHGEVLK+S
Sbjct: 84 MMKLADLIDENTEELAALDAIDAGKLYHMCKAMDIPGAAKTLRYFAGAADKIHGEVLKVS 143
Query: 61 RALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHL 120
R L YTL EP+GVVGHIIPWNFP + FF KVSPALAAGCTM++KPAEQTPL AL+ AHL
Sbjct: 144 RELHAYTLMEPVGVVGHIIPWNFPASFFFTKVSPALAAGCTMVLKPAEQTPLSALFCAHL 203
Query: 121 AKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSL 180
AKLAG+PDGVLNVVPGFG TAGAA++SHMDID VSFTGST GR+VM+AAA+SNLK VSL
Sbjct: 204 AKLAGIPDGVLNVVPGFGSTAGAAVSSHMDIDAVSFTGSTQTGREVMKAAASSNLKRVSL 263
Query: 181 ELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAK 240
ELGGKSPL+IF+D D++ AA++AL GIL NKGE+CVASSRV+VQEGIYDEFEKKLVEKAK
Sbjct: 264 ELGGKSPLIIFNDADIDKAAELALYGILLNKGEVCVASSRVFVQEGIYDEFEKKLVEKAK 323
Query: 241 AWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIGKKGYYIEPTIFT 300
AWVVGDPFDP V+QGPQVDKKQF++ILSYIEHGKREGATLLTGGK +G KGYYIEPTIF+
Sbjct: 324 AWVVGDPFDPKVQQGPQVDKKQFEKILSYIEHGKREGATLLTGGKSVGNKGYYIEPTIFS 383
Query: 301 NVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSIR 360
NV EDMLI ++EIFGPVMAL KFKTVEEAIKSANNTRYGLAAGIMTK+L++ANTVSRSIR
Sbjct: 384 NVKEDMLIVQDEIFGPVMALKKFKTVEEAIKSANNTRYGLAAGIMTKNLDIANTVSRSIR 443
Query: 361 AGIIWINCYFAFDSDCPYGGYKMSGFGRDCGLESLHNYLQVKSVVTPIFNSPWL 414
AG +WINCYFA D+D P+GGYK SGFG+D GLE++H YLQV SVVTPI+NSPWL
Sbjct: 444 AGSVWINCYFAIDNDIPFGGYKASGFGKDYGLEAIHKYLQVNSVVTPIYNSPWL 497
|
Source: Lotus japonicus Species: Lotus japonicus Genus: Lotus Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|356513129|ref|XP_003525266.1| PREDICTED: aldehyde dehydrogenase family 2 member C4-like [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 697 bits (1798), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 324/414 (78%), Positives = 378/414 (91%)
Query: 1 MLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMS 60
+LK+A+LIEE+AE LA L+A+DAGKL+ + ++P AANTLRYYAGAADKIHGEVLKMS
Sbjct: 89 LLKWAELIEENAEELAALDAIDAGKLYHMCRNLEVPAAANTLRYYAGAADKIHGEVLKMS 148
Query: 61 RALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHL 120
R YTL EP+GVVGHI PWNFP TMF++KV+P+LAAGCTM++KPAEQTPL AL+ AHL
Sbjct: 149 RDFHAYTLLEPLGVVGHITPWNFPNTMFYIKVAPSLAAGCTMVLKPAEQTPLSALFNAHL 208
Query: 121 AKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSL 180
AKLAG+PDGV+NVVPGFGPTAGAA++SHMD+DKVSFTGST GR++MQAAA SNLK VSL
Sbjct: 209 AKLAGIPDGVINVVPGFGPTAGAALSSHMDVDKVSFTGSTQTGREIMQAAAKSNLKQVSL 268
Query: 181 ELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAK 240
ELGGKSPL+IFDD D++ AA++ALLGIL+NKGE+CVASSRV VQEGIYDEFEKKLVEKAK
Sbjct: 269 ELGGKSPLIIFDDADIDKAAELALLGILYNKGEVCVASSRVLVQEGIYDEFEKKLVEKAK 328
Query: 241 AWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIGKKGYYIEPTIFT 300
AWVVGDPFDP V+QGPQVDK+QF+++LSYIEHGK+EGATLLTGGK +G KGY+IEPTIF+
Sbjct: 329 AWVVGDPFDPKVQQGPQVDKEQFEKVLSYIEHGKKEGATLLTGGKTVGNKGYFIEPTIFS 388
Query: 301 NVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSIR 360
N+ EDMLIA++EIFGPVMAL KFKT+EEAIKSANNT+YGLAAGI+TK+L+ ANTVSRSIR
Sbjct: 389 NIREDMLIAQDEIFGPVMALKKFKTIEEAIKSANNTKYGLAAGIVTKNLDTANTVSRSIR 448
Query: 361 AGIIWINCYFAFDSDCPYGGYKMSGFGRDCGLESLHNYLQVKSVVTPIFNSPWL 414
AG IWINCYFAF D P+GGYKMSGFG+D GLE+LH YLQVKSVVTP++NSPWL
Sbjct: 449 AGTIWINCYFAFGDDVPFGGYKMSGFGKDHGLEALHKYLQVKSVVTPLYNSPWL 502
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|357500461|ref|XP_003620519.1| Aldehyde dehydrogenase [Medicago truncatula] gi|355495534|gb|AES76737.1| Aldehyde dehydrogenase [Medicago truncatula] | Back alignment and taxonomy information |
|---|
Score = 693 bits (1788), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 337/414 (81%), Positives = 380/414 (91%)
Query: 1 MLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMS 60
MLK+ADLI+++ E +A L+ +DAGKL+++ K DIPG AN +RYYAGAADKIHG+VLK +
Sbjct: 89 MLKWADLIDQNIEEIAALDTIDAGKLYTFCKAVDIPGVANIIRYYAGAADKIHGKVLKPA 148
Query: 61 RALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHL 120
R L YTL EPIGVVGHIIPWNFP+TMF KV+PALAAGCTM++KPAEQTPL AL++AHL
Sbjct: 149 RELHAYTLMEPIGVVGHIIPWNFPSTMFAAKVAPALAAGCTMVLKPAEQTPLSALFYAHL 208
Query: 121 AKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSL 180
AK AG+PDGVLNVVPGFG TAGAAI+SHMDIDKVSFTGST+VGR++M +AA SNLKPVSL
Sbjct: 209 AKEAGIPDGVLNVVPGFGATAGAAISSHMDIDKVSFTGSTEVGREIMVSAARSNLKPVSL 268
Query: 181 ELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAK 240
ELGGKSPLLIFDD DVN AA++ALLGILFNKGEICVA SRV+VQEGIYDEFEKKLVEKAK
Sbjct: 269 ELGGKSPLLIFDDADVNKAAELALLGILFNKGEICVAGSRVFVQEGIYDEFEKKLVEKAK 328
Query: 241 AWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIGKKGYYIEPTIFT 300
AWVVGDPFDP V+QGPQVDKKQF++ILSYIEHGK +GATLLTGGK IG KGYYIEPTIF+
Sbjct: 329 AWVVGDPFDPKVQQGPQVDKKQFEKILSYIEHGKNDGATLLTGGKKIGDKGYYIEPTIFS 388
Query: 301 NVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSIR 360
NV EDM IA++EIFGPVMALMKFKT+EEAIKSANNT+YGLAAGI+TK+L++ANTVSRSIR
Sbjct: 389 NVKEDMRIAQDEIFGPVMALMKFKTIEEAIKSANNTKYGLAAGIVTKNLDIANTVSRSIR 448
Query: 361 AGIIWINCYFAFDSDCPYGGYKMSGFGRDCGLESLHNYLQVKSVVTPIFNSPWL 414
AGIIWINCYFAF +D PYGGYKMSGFGRD GLESLH YLQVKSVVTPI+NSPWL
Sbjct: 449 AGIIWINCYFAFGNDIPYGGYKMSGFGRDFGLESLHKYLQVKSVVTPIYNSPWL 502
|
Source: Medicago truncatula Species: Medicago truncatula Genus: Medicago Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|357518719|ref|XP_003629648.1| Aldehyde dehydrogenase [Medicago truncatula] gi|357521043|ref|XP_003630810.1| Aldehyde dehydrogenase [Medicago truncatula] gi|355523670|gb|AET04124.1| Aldehyde dehydrogenase [Medicago truncatula] gi|355524832|gb|AET05286.1| Aldehyde dehydrogenase [Medicago truncatula] | Back alignment and taxonomy information |
|---|
Score = 682 bits (1759), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 321/414 (77%), Positives = 370/414 (89%)
Query: 1 MLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMS 60
M+KFA+LI+E+ E LA L+A+DAGK++ K +IP AANTLRYYAGAADKIHGEVLK S
Sbjct: 90 MMKFAELIDENIEELATLDAIDAGKVYFINKAFEIPSAANTLRYYAGAADKIHGEVLKSS 149
Query: 61 RALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHL 120
YTL EPIGVVGHIIPWN PT +FF KVSP+LAAGCTM++KPAEQTPL AL++AHL
Sbjct: 150 GQFHAYTLMEPIGVVGHIIPWNAPTMVFFTKVSPSLAAGCTMVLKPAEQTPLSALFYAHL 209
Query: 121 AKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSL 180
AKLAG+P+GVLNVVPGFGPTAGAAI+SHMDID VSFTGS +VGR++MQAAA SNLK VSL
Sbjct: 210 AKLAGIPNGVLNVVPGFGPTAGAAISSHMDIDVVSFTGSVEVGREIMQAAAKSNLKHVSL 269
Query: 181 ELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAK 240
ELGGKSPL+IFDD D++ A ++ALLGIL NKGEICVA SRV+VQEGIYD+ EKKLVEKAK
Sbjct: 270 ELGGKSPLIIFDDADIDKAVELALLGILANKGEICVACSRVFVQEGIYDQVEKKLVEKAK 329
Query: 241 AWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIGKKGYYIEPTIFT 300
AWV+GDPFDP +QGPQ D+ QF++I+SYIEHGKREGATLLTGG+ +G +GYYIEPTIF+
Sbjct: 330 AWVIGDPFDPKTQQGPQADRNQFEKIISYIEHGKREGATLLTGGRRVGSQGYYIEPTIFS 389
Query: 301 NVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSIR 360
NV EDMLIA++EIFGPVMALMKFKT+EEAIKSANNTRYGLAAGI+TK+L++ANTVSRSIR
Sbjct: 390 NVKEDMLIAQDEIFGPVMALMKFKTIEEAIKSANNTRYGLAAGIVTKNLDIANTVSRSIR 449
Query: 361 AGIIWINCYFAFDSDCPYGGYKMSGFGRDCGLESLHNYLQVKSVVTPIFNSPWL 414
AGIIWIN Y A SD P+GGYKMSGFGRD GLE+LH YLQVKS+VTPI+NSPWL
Sbjct: 450 AGIIWINSYLAVGSDIPFGGYKMSGFGRDQGLEALHKYLQVKSIVTPIYNSPWL 503
|
Source: Medicago truncatula Species: Medicago truncatula Genus: Medicago Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|356531251|ref|XP_003534191.1| PREDICTED: aldehyde dehydrogenase family 2 member C4-like [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 681 bits (1757), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 316/414 (76%), Positives = 370/414 (89%)
Query: 1 MLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMS 60
M+K+ADLI++H E +A L+A+DAGKL+ K +IP ANT+RYYAGAADKIHGEVLK +
Sbjct: 86 MMKWADLIDQHVEEIAALDAIDAGKLYHMLKAIEIPATANTIRYYAGAADKIHGEVLKPA 145
Query: 61 RALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHL 120
R YTL EP+GVVGHIIPWNFP+ MF KVSP LAAGCTM++KPAEQTPL AL++AHL
Sbjct: 146 REFHAYTLLEPVGVVGHIIPWNFPSIMFVSKVSPCLAAGCTMVLKPAEQTPLSALFYAHL 205
Query: 121 AKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSL 180
AKLAG+PDGVLNVVPGFG TAGAAI S MDIDKVSFTGST+VGR+VM+AAA SNLKPVSL
Sbjct: 206 AKLAGIPDGVLNVVPGFGATAGAAICSDMDIDKVSFTGSTEVGREVMRAAANSNLKPVSL 265
Query: 181 ELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAK 240
ELGGKSP +IFDD D++ A ++AL+ +++NKGE+C A SRV+VQEGIYDEFEK+LVEKAK
Sbjct: 266 ELGGKSPFIIFDDADLDKAVELALMAVVYNKGEVCAAGSRVFVQEGIYDEFEKRLVEKAK 325
Query: 241 AWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIGKKGYYIEPTIFT 300
AWVVGDPFDP V+QGPQVDKKQF++ILSYIEHGKREGATLLTGGK +G KGYYIEPTIF+
Sbjct: 326 AWVVGDPFDPNVQQGPQVDKKQFEKILSYIEHGKREGATLLTGGKRVGNKGYYIEPTIFS 385
Query: 301 NVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSIR 360
NV EDMLIA++EIFGPV+ALMKFKT+EEAIKSANN+RYGL AG++TK L+ ANT+SRSIR
Sbjct: 386 NVKEDMLIAQDEIFGPVIALMKFKTIEEAIKSANNSRYGLVAGVVTKSLDTANTMSRSIR 445
Query: 361 AGIIWINCYFAFDSDCPYGGYKMSGFGRDCGLESLHNYLQVKSVVTPIFNSPWL 414
AG++WINCYFAF++D PYGG KMSGFG+D GLE+LH YL VKSVVTPI+NSPWL
Sbjct: 446 AGVVWINCYFAFENDIPYGGCKMSGFGKDSGLEALHKYLHVKSVVTPIYNSPWL 499
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|356523743|ref|XP_003530494.1| PREDICTED: aldehyde dehydrogenase family 2 member C4-like [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 678 bits (1750), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 322/414 (77%), Positives = 376/414 (90%)
Query: 1 MLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMS 60
+LK+A++IEE+AE LA L+A+DAGKL+ + ++P AANTLRYYAGAADKIHGEVLKMS
Sbjct: 88 LLKWAEIIEENAEELAALDAIDAGKLYHMCRNVEVPAAANTLRYYAGAADKIHGEVLKMS 147
Query: 61 RALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHL 120
R YTL EP+GVVGHI PWNFP TMF++KV+P+LAAGCTM++KPAEQTPL AL+ AHL
Sbjct: 148 REFHAYTLLEPLGVVGHITPWNFPNTMFYIKVAPSLAAGCTMVLKPAEQTPLSALFSAHL 207
Query: 121 AKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSL 180
AKLAG+PDGV+NVVPGFGPTAGAA++SHMD+DKVSFTGST GR +MQAAA SNLK VSL
Sbjct: 208 AKLAGIPDGVINVVPGFGPTAGAALSSHMDVDKVSFTGSTQTGRVIMQAAAKSNLKQVSL 267
Query: 181 ELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAK 240
ELGGKSPL+IFDD D++ A ++ALLGIL+NKGE+CVASSRV+VQEGIYDEFEKKLVEKAK
Sbjct: 268 ELGGKSPLIIFDDADIDKATELALLGILYNKGEVCVASSRVFVQEGIYDEFEKKLVEKAK 327
Query: 241 AWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIGKKGYYIEPTIFT 300
AWVVGDPFDP V+QGPQVDK+QF+++LSYIEHGK+EGATLLTGGK +G KGY+IEPTIF+
Sbjct: 328 AWVVGDPFDPKVQQGPQVDKEQFEKVLSYIEHGKKEGATLLTGGKTVGNKGYFIEPTIFS 387
Query: 301 NVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSIR 360
N+ EDMLIA++EIFGPVMAL KFKT EEAIKSANNT+YGLAAGI+TK+L+ ANTVSRSIR
Sbjct: 388 NIREDMLIAQDEIFGPVMALKKFKTTEEAIKSANNTKYGLAAGIVTKNLDTANTVSRSIR 447
Query: 361 AGIIWINCYFAFDSDCPYGGYKMSGFGRDCGLESLHNYLQVKSVVTPIFNSPWL 414
AG IWINCYFAF D P+GGYKMSGFG+D GLE+LH YLQVKSVVTP++NSPWL
Sbjct: 448 AGTIWINCYFAFGDDVPFGGYKMSGFGKDHGLEALHKYLQVKSVVTPLYNSPWL 501
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST 
Original result of BLAST against Gene Ontology (AMIGO)
ID ![]() |
Alignment graph ![]() |
Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 414 | ||||||
| TAIR|locus:505006369 | 501 | ALDH2C4 "AT3G24503" [Arabidops | 0.995 | 0.822 | 0.690 | 7.4e-153 | |
| MGI|MGI:1353450 | 501 | Aldh1a1 "aldehyde dehydrogenas | 0.980 | 0.810 | 0.517 | 2.2e-114 | |
| UNIPROTKB|P27463 | 509 | ALDH1A1 "Retinal dehydrogenase | 0.980 | 0.797 | 0.524 | 3.5e-114 | |
| RGD|2087 | 501 | Aldh1a1 "aldehyde dehydrogenas | 0.980 | 0.810 | 0.509 | 4.1e-113 | |
| UNIPROTKB|E2RMX7 | 496 | ALDH1A1 "Uncharacterized prote | 0.980 | 0.818 | 0.522 | 1.4e-112 | |
| UNIPROTKB|J9NS92 | 501 | ALDH1A1 "Uncharacterized prote | 0.980 | 0.810 | 0.522 | 1.4e-112 | |
| TAIR|locus:2097845 | 538 | ALDH2B4 "AT3G48000" [Arabidops | 1.0 | 0.769 | 0.507 | 1.4e-112 | |
| UNIPROTKB|P00352 | 501 | ALDH1A1 "Retinal dehydrogenase | 0.985 | 0.814 | 0.507 | 1.8e-112 | |
| UNIPROTKB|P48644 | 501 | ALDH1A1 "Retinal dehydrogenase | 0.980 | 0.810 | 0.512 | 9.7e-112 | |
| MGI|MGI:1347050 | 501 | Aldh1a7 "aldehyde dehydrogenas | 0.980 | 0.810 | 0.509 | 2e-111 |
| TAIR|locus:505006369 ALDH2C4 "AT3G24503" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1491 (529.9 bits), Expect = 7.4e-153, P = 7.4e-153
Identities = 285/413 (69%), Positives = 332/413 (80%)
Query: 3 KFADXXXXXXXXXXXXXXXXXGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMSR- 61
KFAD GKL K DIP A RY AGAADKIHGE LKM+R
Sbjct: 89 KFADLIEENIEELAKLDAVDGGKLFQLGKYADIPATAGHFRYNAGAADKIHGETLKMTRQ 148
Query: 62 ALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLA 121
+L GYTL+EPIGVVG+IIPWNFP+ MF KV+PA+AAGCTM+VKPAEQT L AL++AHL+
Sbjct: 149 SLFGYTLKEPIGVVGNIIPWNFPSIMFATKVAPAMAAGCTMVVKPAEQTSLSALFYAHLS 208
Query: 122 KLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLE 181
K AG+PDGVLN+V GFG TAGAAIASHMD+DKVSFTGSTDVGR++MQAAA SNLK VSLE
Sbjct: 209 KEAGIPDGVLNIVTGFGSTAGAAIASHMDVDKVSFTGSTDVGRKIMQAAAASNLKKVSLE 268
Query: 182 LGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKA 241
LGGKSPLLIF+D D++ AAD+ALLG +NKGEICVASSRV+VQEGIYD+ +KLVEKAK
Sbjct: 269 LGGKSPLLIFNDADIDKAADLALLGCFYNKGEICVASSRVFVQEGIYDKVVEKLVEKAKD 328
Query: 242 WVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTXXXXXXXXXXXXEPTIFTN 301
W VGDPFD RQGPQVDK+QF++ILSYIEHGK EGATLLT +PTIF +
Sbjct: 329 WTVGDPFDSTARQGPQVDKRQFEKILSYIEHGKNEGATLLTGGKAIGDKGYFIQPTIFAD 388
Query: 302 VTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSIRA 361
VTEDM I ++EIFGPVM+LMKFKTVEE IK ANNT+YGLAAGI+++D+++ NTVSRSI+A
Sbjct: 389 VTEDMKIYQDEIFGPVMSLMKFKTVEEGIKCANNTKYGLAAGILSQDIDLINTVSRSIKA 448
Query: 362 GIIWINCYFAFDSDCPYGGYKMSGFGRDCGLESLHNYLQVKSVVTPIFNSPWL 414
GIIW+NCYF FD DCPYGGYKMSG R+ G+++L NYLQ KSVV P+ NSPW+
Sbjct: 449 GIIWVNCYFGFDLDCPYGGYKMSGNCRESGMDALDNYLQTKSVVMPLHNSPWM 501
|
|
| MGI|MGI:1353450 Aldh1a1 "aldehyde dehydrogenase family 1, subfamily A1" [Mus musculus (taxid:10090)] | Back alignment and assigned GO terms |
|---|
Score = 1128 (402.1 bits), Expect = 2.2e-114, P = 2.2e-114
Identities = 210/406 (51%), Positives = 283/406 (69%)
Query: 3 KFADXXXXXXXXXXXXXXXXXGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMSRA 62
K AD GK+ + A + D+ G L+Y AG ADKIHG+ +
Sbjct: 91 KLADLMERDRLLLATMEALNGGKVFANAYLSDLGGCIKALKYCAGWADKIHGQTIPSDGD 150
Query: 63 LQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAK 122
+ YT REPIGV G IIPWNFP MF K+ PAL+ G T++VKPAEQTPL AL+ A L K
Sbjct: 151 IFTYTRREPIGVCGQIIPWNFPMLMFIWKIGPALSCGNTVVVKPAEQTPLTALHLASLIK 210
Query: 123 LAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLEL 182
AG P GV+N+VPG+GPTAGAAI+SHMD+DKV+FTGST VG+ + +AA SNLK V+LEL
Sbjct: 211 EAGFPPGVVNIVPGYGPTAGAAISSHMDVDKVAFTGSTQVGKLIKEAAGKSNLKRVTLEL 270
Query: 183 GGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAW 242
GGKSP ++F D D++ A + A G+ +++G+ CVA+SR++V+E +YDEF K+ VE+AK +
Sbjct: 271 GGKSPCIVFADADLDIAVEFAHHGVFYHQGQCCVAASRIFVEESVYDEFVKRSVERAKKY 330
Query: 243 VVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTXXXXXXXXXXXXEPTIFTNV 302
V+G+P P + QGPQ+DK+Q D+IL IE GK+EGA L +PT+F+NV
Sbjct: 331 VLGNPLTPGINQGPQIDKEQHDKILDLIESGKKEGAKLECGGGRWGNKGFFVQPTVFSNV 390
Query: 303 TEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSIRAG 362
T++M IAK EIFGPV +MKFK+V++ IK ANNT YGLAAG+ TKDL+ A TVS +++AG
Sbjct: 391 TDEMRIAKEEIFGPVQQIMKFKSVDDVIKRANNTTYGLAAGLFTKDLDKAITVSSALQAG 450
Query: 363 IIWINCYFAFDSDCPYGGYKMSGFGRDCGLESLHNYLQVKSVVTPI 408
++W+NCY + CP+GG+KMSG GR+ G L+ Y ++K+V I
Sbjct: 451 VVWVNCYMMLSAQCPFGGFKMSGNGRELGEHGLYEYTELKTVAMKI 496
|
|
| UNIPROTKB|P27463 ALDH1A1 "Retinal dehydrogenase 1" [Gallus gallus (taxid:9031)] | Back alignment and assigned GO terms |
|---|
Score = 1126 (401.4 bits), Expect = 3.5e-114, P = 3.5e-114
Identities = 213/406 (52%), Positives = 279/406 (68%)
Query: 3 KFADXXXXXXXXXXXXXXXXXGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMSRA 62
K AD GKL S A + D+ T+RY AG ADKIHG + M
Sbjct: 99 KLADLVERDRLTLATMEAIDGGKLFSTAYLMDLGACIKTIRYCAGWADKIHGRTVPMDGN 158
Query: 63 LQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAK 122
+T EP+GV G IIPWNFP MF K++PAL G T++VKPAEQTPL ALY L K
Sbjct: 159 FFTFTRHEPVGVCGQIIPWNFPLVMFIWKIAPALCCGNTVVVKPAEQTPLSALYMGSLIK 218
Query: 123 LAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLEL 182
AG P GV+N+VPGFGPTAGAAI+ HMDIDKVSFTGST+VG+ + +AA +NLK V+LEL
Sbjct: 219 EAGFPPGVVNIVPGFGPTAGAAISHHMDIDKVSFTGSTEVGKLIKEAAGKTNLKRVTLEL 278
Query: 183 GGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAW 242
GGKSP +IF D D++ AA+ A +G+ +++G+ C+A SR++V+E IYDEF ++ +E+AK +
Sbjct: 279 GGKSPNIIFADADLDEAAEFAHIGLFYHQGQCCIAGSRIFVEEPIYDEFVRRSIERAKKY 338
Query: 243 VVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTXXXXXXXXXXXXEPTIFTNV 302
+GDP P V+QGPQ+DK+QF +IL IE GK+EGA L +PT+F+NV
Sbjct: 339 TLGDPLLPGVQQGPQIDKEQFQKILDLIESGKKEGAKLECGGGPWGNKGYFIQPTVFSNV 398
Query: 303 TEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSIRAG 362
T+DM IAK EIFGPV +MKFKT++E IK ANNT YGLAA + TKD++ A T + +++AG
Sbjct: 399 TDDMRIAKEEIFGPVQQIMKFKTIDEVIKRANNTTYGLAAAVFTKDIDKALTFASALQAG 458
Query: 363 IIWINCYFAFDSDCPYGGYKMSGFGRDCGLESLHNYLQVKSVVTPI 408
+W+NCY AF + CP+GG+KMSG GR+ G L Y +VK+V I
Sbjct: 459 TVWVNCYSAFSAQCPFGGFKMSGNGRELGEYGLQEYTEVKTVTIKI 504
|
|
| RGD|2087 Aldh1a1 "aldehyde dehydrogenase 1 family, member A1" [Rattus norvegicus (taxid:10116)] | Back alignment and assigned GO terms |
|---|
Score = 1116 (397.9 bits), Expect = 4.1e-113, P = 4.1e-113
Identities = 207/406 (50%), Positives = 283/406 (69%)
Query: 3 KFADXXXXXXXXXXXXXXXXXGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMSRA 62
K AD GK+ + A + D+ G+ L+Y AG ADKIHG+ +
Sbjct: 91 KLADLMERDRLLLATIEAINGGKVFANAYLSDLGGSIKALKYCAGWADKIHGQTIPSDGD 150
Query: 63 LQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAK 122
+ +T REPIGV G IIPWNFP MF K+ PAL+ G T++VKPAEQTPL AL+ A L K
Sbjct: 151 IFTFTRREPIGVCGQIIPWNFPLLMFIWKIGPALSCGNTVVVKPAEQTPLTALHMASLIK 210
Query: 123 LAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLEL 182
AG P GV+N+VPG+GPTAGAAI+SHMD+DKV+FTGST VG+ + +AA SNLK V+LEL
Sbjct: 211 EAGFPPGVVNIVPGYGPTAGAAISSHMDVDKVAFTGSTQVGKLIKEAAGKSNLKRVTLEL 270
Query: 183 GGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAW 242
GGKSP ++F D D++ A + A G+ +++G+ CVA+SR++V+E +YDEF +K VE+AK +
Sbjct: 271 GGKSPCIVFADADLDIAVEFAHHGVFYHQGQCCVAASRIFVEESVYDEFVRKSVERAKKY 330
Query: 243 VVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTXXXXXXXXXXXXEPTIFTNV 302
V+G+P + QGPQ+DK+Q D+IL IE GK+EGA L +PT+F+NV
Sbjct: 331 VLGNPLTQGINQGPQIDKEQHDKILDLIESGKKEGAKLECGGGRWGNKGFFVQPTVFSNV 390
Query: 303 TEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSIRAG 362
T++M IAK EIFGPV +MKFK++++ IK ANNT YGLAAG+ TKDL+ A TVS +++AG
Sbjct: 391 TDEMRIAKEEIFGPVQQIMKFKSIDDVIKRANNTTYGLAAGVFTKDLDRAITVSSALQAG 450
Query: 363 IIWINCYFAFDSDCPYGGYKMSGFGRDCGLESLHNYLQVKSVVTPI 408
++W+NCY + CP+GG+KMSG GR+ G L+ Y ++K+V I
Sbjct: 451 VVWVNCYMILSAQCPFGGFKMSGNGRELGEHGLYEYTELKTVAMKI 496
|
|
| UNIPROTKB|E2RMX7 ALDH1A1 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] | Back alignment and assigned GO terms |
|---|
Score = 1111 (396.2 bits), Expect = 1.4e-112, P = 1.4e-112
Identities = 212/406 (52%), Positives = 280/406 (68%)
Query: 3 KFADXXXXXXXXXXXXXXXXXGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMSRA 62
K AD GKL S + D+ G TLRY AG ADKIHG + +
Sbjct: 86 KLADLIERDRLLLATMESINGGKLFSNSYTLDLGGCVATLRYCAGWADKIHGRTIPVDGN 145
Query: 63 LQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAK 122
GYT EPIGV G IIPWNFP MF K+ PAL G T++VKPAEQTPL AL+ A L +
Sbjct: 146 FFGYTRHEPIGVCGQIIPWNFPLFMFIWKIGPALCCGNTVVVKPAEQTPLTALHVASLIQ 205
Query: 123 LAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLEL 182
AG P GV+N+VPG+GPTAGAAI+SHMDIDKV+FTGST+VG+ + +AA SNLK V+LEL
Sbjct: 206 EAGFPPGVVNIVPGYGPTAGAAISSHMDIDKVAFTGSTEVGKMIKEAAGKSNLKRVTLEL 265
Query: 183 GGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAW 242
GGKSP ++F D D+++A ++A + +++G+ C+A+SR++V+E IYDEF ++ VE+AK +
Sbjct: 266 GGKSPFIVFADSDLDSAVEVAHQALFYHQGQCCIAASRLFVEESIYDEFVRRSVERAKKY 325
Query: 243 VVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTXXXXXXXXXXXXEPTIFTNV 302
V+G+P P V QGPQ+DKKQ+++IL IE GK+EGA L +PT+F+NV
Sbjct: 326 VLGNPLTPGVSQGPQIDKKQYEKILDLIESGKKEGAKLECGGGPWGNKGFFIQPTVFSNV 385
Query: 303 TEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSIRAG 362
T++M IAK EIFGPV +MKFK++++ IK ANNT YGLAAGI TKD++ A TVS +++AG
Sbjct: 386 TDEMRIAKEEIFGPVQQIMKFKSLDDVIKRANNTHYGLAAGIFTKDIDKAITVSSALQAG 445
Query: 363 IIWINCYFAFDSDCPYGGYKMSGFGRDCGLESLHNYLQVKSVVTPI 408
+W+NCY CP+GG+KMSG GR+ G L Y +VK V I
Sbjct: 446 TVWVNCYSVVSPQCPFGGFKMSGNGRELGEYGLQEYTEVKMVTMKI 491
|
|
| UNIPROTKB|J9NS92 ALDH1A1 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] | Back alignment and assigned GO terms |
|---|
Score = 1111 (396.2 bits), Expect = 1.4e-112, P = 1.4e-112
Identities = 212/406 (52%), Positives = 280/406 (68%)
Query: 3 KFADXXXXXXXXXXXXXXXXXGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMSRA 62
K AD GKL S + D+ G TLRY AG ADKIHG + +
Sbjct: 91 KLADLIERDRLLLATMESINGGKLFSNSYTLDLGGCVATLRYCAGWADKIHGRTIPVDGN 150
Query: 63 LQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAK 122
GYT EPIGV G IIPWNFP MF K+ PAL G T++VKPAEQTPL AL+ A L +
Sbjct: 151 FFGYTRHEPIGVCGQIIPWNFPLFMFIWKIGPALCCGNTVVVKPAEQTPLTALHVASLIQ 210
Query: 123 LAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLEL 182
AG P GV+N+VPG+GPTAGAAI+SHMDIDKV+FTGST+VG+ + +AA SNLK V+LEL
Sbjct: 211 EAGFPPGVVNIVPGYGPTAGAAISSHMDIDKVAFTGSTEVGKMIKEAAGKSNLKRVTLEL 270
Query: 183 GGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAW 242
GGKSP ++F D D+++A ++A + +++G+ C+A+SR++V+E IYDEF ++ VE+AK +
Sbjct: 271 GGKSPFIVFADSDLDSAVEVAHQALFYHQGQCCIAASRLFVEESIYDEFVRRSVERAKKY 330
Query: 243 VVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTXXXXXXXXXXXXEPTIFTNV 302
V+G+P P V QGPQ+DKKQ+++IL IE GK+EGA L +PT+F+NV
Sbjct: 331 VLGNPLTPGVSQGPQIDKKQYEKILDLIESGKKEGAKLECGGGPWGNKGFFIQPTVFSNV 390
Query: 303 TEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSIRAG 362
T++M IAK EIFGPV +MKFK++++ IK ANNT YGLAAGI TKD++ A TVS +++AG
Sbjct: 391 TDEMRIAKEEIFGPVQQIMKFKSLDDVIKRANNTHYGLAAGIFTKDIDKAITVSSALQAG 450
Query: 363 IIWINCYFAFDSDCPYGGYKMSGFGRDCGLESLHNYLQVKSVVTPI 408
+W+NCY CP+GG+KMSG GR+ G L Y +VK V I
Sbjct: 451 TVWVNCYSVVSPQCPFGGFKMSGNGRELGEYGLQEYTEVKMVTMKI 496
|
|
| TAIR|locus:2097845 ALDH2B4 "AT3G48000" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1111 (396.2 bits), Expect = 1.4e-112, P = 1.4e-112
Identities = 210/414 (50%), Positives = 280/414 (67%)
Query: 1 MLKFADXXXXXXXXXXXXXXXXXGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMS 60
+L+FAD GK + + +IP A RYYAG ADKIHG +
Sbjct: 125 LLRFADLVEKHSEELASLETWDNGKPYQQSLTAEIPMFARLFRYYAGWADKIHGLTIPAD 184
Query: 61 RALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHL 120
Q +TL EPIGV G IIPWNFP MF KV PALA G T+++K AEQTPL A Y L
Sbjct: 185 GNYQVHTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLTAFYAGKL 244
Query: 121 AKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSL 180
AG+P GVLN+V GFG TAGAA+ASHMD+DK++FTGSTD G+ ++ AA SNLKPV+L
Sbjct: 245 FLEAGLPPGVLNIVSGFGATAGAALASHMDVDKLAFTGSTDTGKVILGLAANSNLKPVTL 304
Query: 181 ELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAK 240
ELGGKSP ++F+D D++ A ++A + FN+G+ C A SR +V E +YDEF +K +A
Sbjct: 305 ELGGKSPFIVFEDADIDKAVELAHFALFFNQGQCCCAGSRTFVHEKVYDEFVEKSKARAL 364
Query: 241 AWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTXXXXXXXXXXXXEPTIFT 300
VVGDPF + QGPQ+D KQF++++ YI+ G ATL +PT+F+
Sbjct: 365 KRVVGDPFRKGIEQGPQIDLKQFEKVMKYIKSGIESNATLECGGDQIGDKGYFIQPTVFS 424
Query: 301 NVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSIR 360
NV +DMLIA++EIFGPV +++KF V+E IK AN T+YGLAAG+ TK+L+ AN VSR+++
Sbjct: 425 NVKDDMLIAQDEIFGPVQSILKFSDVDEVIKRANETKYGLAAGVFTKNLDTANRVSRALK 484
Query: 361 AGIIWINCYFAFDSDCPYGGYKMSGFGRDCGLESLHNYLQVKSVVTPIFNSPWL 414
AG +W+NC+ FD+ P+GGYKMSG GR+ G+ SL+NYLQ+K+VVT + W+
Sbjct: 485 AGTVWVNCFDVFDAAIPFGGYKMSGNGREKGIYSLNNYLQIKAVVTALNKPAWI 538
|
|
| UNIPROTKB|P00352 ALDH1A1 "Retinal dehydrogenase 1" [Homo sapiens (taxid:9606)] | Back alignment and assigned GO terms |
|---|
Score = 1110 (395.8 bits), Expect = 1.8e-112, P = 1.8e-112
Identities = 207/408 (50%), Positives = 281/408 (68%)
Query: 1 MLKFADXXXXXXXXXXXXXXXXXGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMS 60
+ K AD GKL+S A + D+ G TLRY AG ADKI G + +
Sbjct: 89 LYKLADLIERDRLLLATMESMNGGKLYSNAYLNDLAGCIKTLRYCAGWADKIQGRTIPID 148
Query: 61 RALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHL 120
YT EPIGV G IIPWNFP M K+ PAL+ G T++VKPAEQTPL AL+ A L
Sbjct: 149 GNFFTYTRHEPIGVCGQIIPWNFPLVMLIWKIGPALSCGNTVVVKPAEQTPLTALHVASL 208
Query: 121 AKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSL 180
K AG P GV+N+VPG+GPTAGAAI+SHMDIDKV+FTGST+VG+ + +AA SNLK V+L
Sbjct: 209 IKEAGFPPGVVNIVPGYGPTAGAAISSHMDIDKVAFTGSTEVGKLIKEAAGKSNLKRVTL 268
Query: 181 ELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAK 240
ELGGKSP ++ D D++ A + A G+ +++G+ C+A+SR++V+E IYDEF ++ VE+AK
Sbjct: 269 ELGGKSPCIVLADADLDNAVEFAHHGVFYHQGQCCIAASRIFVEESIYDEFVRRSVERAK 328
Query: 241 AWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTXXXXXXXXXXXXEPTIFT 300
+++G+P P V QGPQ+DK+Q+D+IL IE GK+EGA L +PT+F+
Sbjct: 329 KYILGNPLTPGVTQGPQIDKEQYDKILDLIESGKKEGAKLECGGGPWGNKGYFVQPTVFS 388
Query: 301 NVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSIR 360
NVT++M IAK EIFGPV +MKFK++++ IK ANNT YGL+AG+ TKD++ A T+S +++
Sbjct: 389 NVTDEMRIAKEEIFGPVQQIMKFKSLDDVIKRANNTFYGLSAGVFTKDIDKAITISSALQ 448
Query: 361 AGIIWINCYFAFDSDCPYGGYKMSGFGRDCGLESLHNYLQVKSVVTPI 408
AG +W+NCY + CP+GG+KMSG GR+ G H Y +VK+V I
Sbjct: 449 AGTVWVNCYGVVSAQCPFGGFKMSGNGRELGEYGFHEYTEVKTVTVKI 496
|
|
| UNIPROTKB|P48644 ALDH1A1 "Retinal dehydrogenase 1" [Bos taurus (taxid:9913)] | Back alignment and assigned GO terms |
|---|
Score = 1103 (393.3 bits), Expect = 9.7e-112, P = 9.7e-112
Identities = 208/406 (51%), Positives = 279/406 (68%)
Query: 3 KFADXXXXXXXXXXXXXXXXXGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMSRA 62
K AD GKL S A + D+ G TLRY AG ADKI G + M
Sbjct: 91 KLADLIERDHLLLATMEAMNGGKLFSNAYLMDLGGCIKTLRYCAGWADKIQGRTIPMDGN 150
Query: 63 LQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAK 122
YT EP+GV G IIPWNFP MF K+ PAL+ G T++VKPAEQTPL AL+ L K
Sbjct: 151 FFTYTRSEPVGVCGQIIPWNFPLLMFLWKIGPALSCGNTVVVKPAEQTPLTALHMGSLIK 210
Query: 123 LAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLEL 182
AG P GV+N+VPG+GPTAGAAI+SHMD+DKV+FTGST+VG+ + +AA SNLK VSLEL
Sbjct: 211 EAGFPPGVVNIVPGYGPTAGAAISSHMDVDKVAFTGSTEVGKLIKEAAGKSNLKRVSLEL 270
Query: 183 GGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAW 242
GGKSP ++F D D++ A + A G+ +++G+ C+A+SR++V+E IYDEF ++ VE+AK +
Sbjct: 271 GGKSPCIVFADADLDNAVEFAHQGVFYHQGQCCIAASRLFVEESIYDEFVRRSVERAKKY 330
Query: 243 VVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTXXXXXXXXXXXXEPTIFTNV 302
V+G+P P V QGPQ+DK+Q+++IL IE GK+EGA L +PT+F++V
Sbjct: 331 VLGNPLTPGVSQGPQIDKEQYEKILDLIESGKKEGAKLECGGGPWGNKGYFIQPTVFSDV 390
Query: 303 TEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSIRAG 362
T+DM IAK EIFGPV +MKFK++++ IK ANNT YGL+AGI T D++ A TVS ++++G
Sbjct: 391 TDDMRIAKEEIFGPVQQIMKFKSLDDVIKRANNTFYGLSAGIFTNDIDKAITVSSALQSG 450
Query: 363 IIWINCYFAFDSDCPYGGYKMSGFGRDCGLESLHNYLQVKSVVTPI 408
+W+NCY + CP+GG+KMSG GR+ G H Y +VK+V I
Sbjct: 451 TVWVNCYSVVSAQCPFGGFKMSGNGRELGEYGFHEYTEVKTVTIKI 496
|
|
| MGI|MGI:1347050 Aldh1a7 "aldehyde dehydrogenase family 1, subfamily A7" [Mus musculus (taxid:10090)] | Back alignment and assigned GO terms |
|---|
Score = 1100 (392.3 bits), Expect = 2.0e-111, P = 2.0e-111
Identities = 207/406 (50%), Positives = 285/406 (70%)
Query: 3 KFADXXXXXXXXXXXXXXXXXGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMSRA 62
K AD GK+ + A + D+ + L+Y+AG ADKIHG+ +
Sbjct: 91 KLADLMERDRLLLATMESMNAGKVFAHAYLLDVEISIKALQYFAGWADKIHGQTIPSDGN 150
Query: 63 LQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAK 122
+ YT REPIGV G IIPWN P +F K+ PAL+ G T++VKPAEQTPL AL+ A L K
Sbjct: 151 IFTYTRREPIGVCGQIIPWNGPLIIFTWKLGPALSCGNTVVVKPAEQTPLTALHMASLIK 210
Query: 123 LAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLEL 182
AG P GV+N+VPG+GPTAG AI+SHMDIDKVSFTGST+VG+ + +AA SNLK V+LEL
Sbjct: 211 EAGFPPGVVNIVPGYGPTAGGAISSHMDIDKVSFTGSTEVGKLIKEAAGKSNLKRVTLEL 270
Query: 183 GGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAW 242
GGKSP ++F D D+++A + A G+ F++G+ICVA+SR++V+E IYDEF ++ VE+AK +
Sbjct: 271 GGKSPCIVFADADLDSAVEFAHQGVFFHQGQICVAASRLFVEESIYDEFVRRSVERAKKY 330
Query: 243 VVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTXXXXXXXXXXXXEPTIFTNV 302
++G+P + + QGPQ+DK+Q ++IL IE GK+EGA L +PT+F+NV
Sbjct: 331 ILGNPLNSGINQGPQIDKEQHNKILGLIESGKKEGAKLECGGGRWGNKGFFVQPTVFSNV 390
Query: 303 TEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSIRAG 362
T++M IAK EIFGPV +MKFK++++ IK ANNT YGLAAG+ TKDL+ A TVS +++AG
Sbjct: 391 TDEMRIAKEEIFGPVQQIMKFKSMDDVIKRANNTTYGLAAGVFTKDLDKAITVSSALQAG 450
Query: 363 IIWINCYFAFDSDCPYGGYKMSGFGRDCGLESLHNYLQVKSVVTPI 408
++W+NCY A CP+GG+KMSG GR+ G L+ Y ++K+V I
Sbjct: 451 MVWVNCYLAVPVQCPFGGFKMSGNGRELGEHGLYEYTELKTVAMQI 496
|
|
Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries 
Original result of BLAST against SWISS-PROT
ID ![]() | Name ![]() | Annotated EC number ![]() | Identity ![]() | Query coverage ![]() | Hit coverage ![]() | RBH(Q2H) ![]() | RBH(H2Q) ![]() |
| P51647 | AL1A1_RAT | 1, ., 2, ., 1, ., 3, 6 | 0.5369 | 0.9806 | 0.8103 | yes | no |
| P42041 | ALDH_ALTAL | 1, ., 2, ., 1, ., 3 | 0.5422 | 0.9710 | 0.8088 | N/A | no |
| Q25417 | ALDH2_LEITA | 1, ., 2, ., 1, ., 3 | 0.5049 | 0.9758 | 0.8112 | N/A | no |
| P41751 | ALDH_ASPNG | 1, ., 2, ., 1, ., 3 | 0.5544 | 0.9734 | 0.8108 | yes | no |
| P40108 | ALDH_DAVTA | 1, ., 2, ., 1, ., 3 | 0.5561 | 0.9661 | 0.8064 | N/A | no |
| O34660 | ALDH4_BACSU | 1, ., 2, ., 1, ., 3 | 0.4826 | 0.9734 | 0.8141 | yes | no |
| Q27640 | ALDH_ENCBU | 1, ., 2, ., 1, ., 3 | 0.5247 | 0.9758 | 0.8128 | N/A | no |
| P00352 | AL1A1_HUMAN | 1, ., 2, ., 1, ., 3, 6 | 0.5392 | 0.9855 | 0.8143 | yes | no |
| P15437 | AL1A1_HORSE | 1, ., 2, ., 1, ., 3, 6 | 0.5441 | 0.9855 | 0.816 | yes | no |
| Q56YU0 | AL2C4_ARATH | 1, ., 2, ., 1, ., 3 | 0.7360 | 0.9951 | 0.8223 | yes | no |
| P48644 | AL1A1_BOVIN | 1, ., 2, ., 1, ., 3, 6 | 0.5492 | 0.9806 | 0.8103 | yes | no |
| Q28399 | ALDH1_ELEED | 1, ., 2, ., 1, ., 3 | 0.5318 | 0.9855 | 0.8143 | N/A | no |
| P51977 | AL1A1_SHEEP | 1, ., 2, ., 1, ., 3, 6 | 0.5492 | 0.9806 | 0.8103 | N/A | no |
| P81178 | ALDH2_MESAU | 1, ., 2, ., 1, ., 3 | 0.5344 | 0.9806 | 0.812 | N/A | no |
| Q29490 | ALDH1_MACPR | 1, ., 2, ., 1, ., 3 | 0.5343 | 0.9855 | 0.8143 | N/A | no |
| P08157 | ALDH_EMENI | 1, ., 2, ., 1, ., 3 | 0.5522 | 0.9685 | 0.8068 | yes | no |
| O14293 | YF19_SCHPO | 1, ., 2, ., 1, ., - | 0.5321 | 0.9734 | 0.8011 | yes | no |
| Q8HYE4 | AL1A1_MACFA | 1, ., 2, ., 1, ., 3, 6 | 0.5343 | 0.9855 | 0.8143 | N/A | no |
| O74187 | ALDH_AGABI | 1, ., 2, ., 1, ., 3 | 0.5148 | 0.9758 | 0.808 | N/A | no |
| P24549 | AL1A1_MOUSE | 1, ., 2, ., 1, ., 3, 6 | 0.5467 | 0.9806 | 0.8103 | yes | no |
| Q2XQV4 | ALDH2_PIG | 1, ., 2, ., 1, ., 3 | 0.5270 | 0.9806 | 0.7792 | yes | no |
| Q8MI17 | AL1A1_RABIT | 1, ., 2, ., 1, ., 3, 6 | 0.5539 | 0.9855 | 0.8225 | yes | no |
| P86886 | AL1A1_MESAU | 1, ., 2, ., 1, ., 3, 6 | 0.5465 | 0.9855 | 0.816 | N/A | no |
| P27463 | AL1A1_CHICK | 1, ., 2, ., 1, ., 3, 6 | 0.5615 | 0.9806 | 0.7976 | yes | no |
EC Number Prediction by Ezypred Server 
Original result from Ezypred Server
Fail to connect to Ezypred Server
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING 
Original result from the STRING server
Fail to connect to STRING server
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against CDD database part I
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 414 | |||
| PLN02766 | 501 | PLN02766, PLN02766, coniferyl-aldehyde dehydrogena | 0.0 | |
| cd07091 | 476 | cd07091, ALDH_F1-2_Ald2-like, ALDH subfamily: ALDH | 0.0 | |
| cd07142 | 476 | cd07142, ALDH_F2BC, Arabidosis aldehyde dehydrogen | 0.0 | |
| cd07141 | 481 | cd07141, ALDH_F1AB_F2_RALDH1, NAD+-dependent retin | 0.0 | |
| pfam00171 | 459 | pfam00171, Aldedh, Aldehyde dehydrogenase family | 0.0 | |
| PLN02466 | 538 | PLN02466, PLN02466, aldehyde dehydrogenase family | 0.0 | |
| cd07112 | 462 | cd07112, ALDH_GABALDH-PuuC, Escherichia coli NADP+ | 0.0 | |
| cd07078 | 432 | cd07078, ALDH, NAD(P)+ dependent aldehyde dehydrog | 0.0 | |
| cd07143 | 481 | cd07143, ALDH_AldA_AN0554, Aspergillus nidulans al | 0.0 | |
| cd07144 | 484 | cd07144, ALDH_ALD2-YMR170C, Saccharomyces cerevisi | 0.0 | |
| cd07115 | 453 | cd07115, ALDH_HMSADH_HapE, Pseudomonas fluorescens | 0.0 | |
| cd07114 | 457 | cd07114, ALDH_DhaS, Uncharacterized Candidatus pel | 0.0 | |
| COG1012 | 472 | COG1012, PutA, NAD-dependent aldehyde dehydrogenas | 1e-176 | |
| cd07093 | 455 | cd07093, ALDH_F8_HMSADH, Human aldehyde dehydrogen | 1e-176 | |
| cd07119 | 482 | cd07119, ALDH_BADH-GbsA, Bacillus subtilis NAD+-de | 1e-167 | |
| cd07103 | 451 | cd07103, ALDH_F5_SSADH_GabD, Mitochondrial succina | 1e-163 | |
| cd07110 | 456 | cd07110, ALDH_F10_BADH, Arabidopsis betaine aldehy | 1e-163 | |
| PRK13252 | 488 | PRK13252, PRK13252, betaine aldehyde dehydrogenase | 1e-162 | |
| cd07109 | 454 | cd07109, ALDH_AAS00426, Uncharacterized Saccharopo | 1e-161 | |
| cd07559 | 480 | cd07559, ALDH_ACDHII_AcoD-like, Ralstonia eutrophu | 1e-158 | |
| cd07090 | 457 | cd07090, ALDH_F9_TMBADH, NAD+-dependent 4-trimethy | 1e-156 | |
| cd07140 | 486 | cd07140, ALDH_F1L_FTFDH, 10-formyltetrahydrofolate | 1e-156 | |
| cd07118 | 454 | cd07118, ALDH_SNDH, Gluconobacter oxydans L-sorbos | 1e-155 | |
| cd07138 | 466 | cd07138, ALDH_CddD_SSP0762, Rhodococcus ruber 6-ox | 1e-153 | |
| cd07092 | 450 | cd07092, ALDH_ABALDH-YdcW, Escherichia coli NAD+-d | 1e-150 | |
| PLN02467 | 503 | PLN02467, PLN02467, betaine aldehyde dehydrogenase | 1e-149 | |
| cd07117 | 475 | cd07117, ALDH_StaphAldA1, Uncharacterized Staphylo | 1e-148 | |
| PRK13473 | 475 | PRK13473, PRK13473, gamma-aminobutyraldehyde dehyd | 1e-147 | |
| TIGR01804 | 467 | TIGR01804, BADH, glycine betaine aldehyde dehydrog | 1e-147 | |
| cd07089 | 459 | cd07089, ALDH_CddD-AldA-like, Rhodococcus ruber 6- | 1e-146 | |
| cd07139 | 471 | cd07139, ALDH_AldA-Rv0768, Mycobacterium tuberculo | 1e-146 | |
| cd07097 | 473 | cd07097, ALDH_KGSADH-YcbD, Bacillus subtilis NADP+ | 1e-136 | |
| cd07088 | 468 | cd07088, ALDH_LactADH-AldA, Escherichia coli lacta | 1e-135 | |
| cd07106 | 446 | cd07106, ALDH_AldA-AAD23400, Streptomyces aureofac | 1e-134 | |
| cd07107 | 456 | cd07107, ALDH_PhdK-like, Nocardioides 2-carboxyben | 1e-133 | |
| cd07111 | 480 | cd07111, ALDH_F16, Aldehyde dehydrogenase family 1 | 1e-133 | |
| PRK09847 | 494 | PRK09847, PRK09847, gamma-glutamyl-gamma-aminobuty | 1e-133 | |
| cd07104 | 431 | cd07104, ALDH_BenzADH-like, ALDH subfamily: NAD(P) | 1e-132 | |
| cd07108 | 457 | cd07108, ALDH_MGR_2402, Magnetospirillum NAD(P)+-d | 1e-129 | |
| TIGR02299 | 488 | TIGR02299, HpaE, 5-carboxymethyl-2-hydroxymuconate | 1e-129 | |
| cd07116 | 479 | cd07116, ALDH_ACDHII-AcoD, Ralstonia eutrophus NAD | 1e-128 | |
| cd07113 | 477 | cd07113, ALDH_PADH_NahF, Escherichia coli NAD+-dep | 1e-125 | |
| TIGR01780 | 448 | TIGR01780, SSADH, succinate-semialdehyde dehydroge | 1e-125 | |
| cd07149 | 453 | cd07149, ALDH_y4uC, Uncharacterized ALDH (y4uC) wi | 1e-124 | |
| PLN02278 | 498 | PLN02278, PLN02278, succinic semialdehyde dehydrog | 1e-123 | |
| cd07120 | 455 | cd07120, ALDH_PsfA-ACA09737, Pseudomonas putida al | 1e-123 | |
| cd07150 | 451 | cd07150, ALDH_VaniDH_like, Pseudomonas putida vani | 1e-121 | |
| cd07131 | 478 | cd07131, ALDH_AldH-CAJ73105, Uncharacterized Candi | 1e-121 | |
| cd07099 | 453 | cd07099, ALDH_DDALDH, Methylomonas sp | 1e-115 | |
| TIGR03216 | 481 | TIGR03216, OH_muco_semi_DH, 2-hydroxymuconic semia | 1e-115 | |
| cd07100 | 429 | cd07100, ALDH_SSADH1_GabD1, Mycobacterium tubercul | 1e-111 | |
| cd07124 | 512 | cd07124, ALDH_PutA-P5CDH-RocA, Delta(1)-pyrroline- | 1e-110 | |
| cd07145 | 456 | cd07145, ALDH_LactADH_F420-Bios, Methanocaldococcu | 1e-109 | |
| cd07105 | 432 | cd07105, ALDH_SaliADH, Salicylaldehyde dehydrogena | 1e-106 | |
| cd07151 | 465 | cd07151, ALDH_HBenzADH, NADP+-dependent p-hydroxyb | 1e-106 | |
| cd07086 | 478 | cd07086, ALDH_F7_AASADH-like, NAD+-dependent alpha | 1e-104 | |
| PRK09407 | 524 | PRK09407, gabD2, succinic semialdehyde dehydrogena | 1e-103 | |
| cd07101 | 454 | cd07101, ALDH_SSADH2_GabD2, Mycobacterium tubercul | 1e-102 | |
| cd06534 | 367 | cd06534, ALDH-SF, NAD(P)+-dependent aldehyde dehyd | 1e-102 | |
| cd07094 | 453 | cd07094, ALDH_F21_LactADH-like, ALDH subfamily: NA | 1e-102 | |
| PRK11241 | 482 | PRK11241, gabD, succinate-semialdehyde dehydrogena | 1e-101 | |
| cd07152 | 443 | cd07152, ALDH_BenzADH, NAD-dependent benzaldehyde | 1e-101 | |
| cd07147 | 452 | cd07147, ALDH_F21_RNP123, Aldehyde dehydrogenase f | 1e-100 | |
| TIGR03374 | 472 | TIGR03374, ABALDH, 1-pyrroline dehydrogenase | 2e-99 | |
| PRK10090 | 409 | PRK10090, PRK10090, aldehyde dehydrogenase A; Prov | 2e-98 | |
| cd07146 | 451 | cd07146, ALDH_PhpJ, Streptomyces putative phosphon | 1e-95 | |
| cd07102 | 452 | cd07102, ALDH_EDX86601, Uncharacterized aldehyde d | 5e-95 | |
| cd07082 | 473 | cd07082, ALDH_F11_NP-GAPDH, NADP+-dependent non-ph | 1e-94 | |
| cd07085 | 478 | cd07085, ALDH_F6_MMSDH, Methylmalonate semialdehyd | 2e-93 | |
| cd07098 | 465 | cd07098, ALDH_F15-22, Aldehyde dehydrogenase famil | 2e-90 | |
| PRK03137 | 514 | PRK03137, PRK03137, 1-pyrroline-5-carboxylate dehy | 2e-88 | |
| TIGR04284 | 480 | TIGR04284, aldehy_Rv0768, aldehyde dehydrogenase, | 4e-88 | |
| TIGR01237 | 511 | TIGR01237, D1pyr5carbox2, delta-1-pyrroline-5-carb | 7e-83 | |
| TIGR03250 | 472 | TIGR03250, PhnAcAld_DH, putative phosphonoacetalde | 2e-72 | |
| PRK09406 | 457 | PRK09406, gabD1, succinic semialdehyde dehydrogena | 4e-69 | |
| cd07083 | 500 | cd07083, ALDH_P5CDH, ALDH subfamily NAD+-dependent | 7e-69 | |
| cd07148 | 455 | cd07148, ALDH_RL0313, Uncharacterized ALDH ( RL031 | 9e-69 | |
| cd07125 | 518 | cd07125, ALDH_PutA-P5CDH, Delta(1)-pyrroline-5-car | 2e-65 | |
| cd07130 | 474 | cd07130, ALDH_F7_AASADH, NAD+-dependent alpha-amin | 6e-65 | |
| cd07087 | 426 | cd07087, ALDH_F3-13-14_CALDH-like, ALDH subfamily: | 9e-65 | |
| cd07133 | 434 | cd07133, ALDH_CALDH_CalB, Coniferyl aldehyde dehyd | 2e-63 | |
| cd07134 | 433 | cd07134, ALDH_AlkH-like, Pseudomonas putida Aldehy | 4e-62 | |
| TIGR01722 | 477 | TIGR01722, MMSDH, methylmalonic acid semialdehyde | 6e-62 | |
| cd07095 | 431 | cd07095, ALDH_SGSD_AstD, N-succinylglutamate 5-sem | 3e-60 | |
| cd07135 | 436 | cd07135, ALDH_F14-YMR110C, Saccharomyces cerevisia | 7e-60 | |
| cd07136 | 449 | cd07136, ALDH_YwdH-P39616, Bacillus subtilis aldeh | 1e-57 | |
| PRK13968 | 462 | PRK13968, PRK13968, putative succinate semialdehyd | 3e-57 | |
| PRK11904 | 1038 | PRK11904, PRK11904, bifunctional proline dehydroge | 4e-55 | |
| PLN02419 | 604 | PLN02419, PLN02419, methylmalonate-semialdehyde de | 2e-53 | |
| PRK09457 | 487 | PRK09457, astD, succinylglutamic semialdehyde dehy | 4e-53 | |
| TIGR01238 | 500 | TIGR01238, D1pyr5carbox3, delta-1-pyrroline-5-carb | 6e-52 | |
| PRK11905 | 1208 | PRK11905, PRK11905, bifunctional proline dehydroge | 4e-51 | |
| PLN00412 | 496 | PLN00412, PLN00412, NADP-dependent glyceraldehyde- | 6e-51 | |
| COG4230 | 769 | COG4230, COG4230, Delta 1-pyrroline-5-carboxylate | 1e-50 | |
| PTZ00381 | 493 | PTZ00381, PTZ00381, aldehyde dehydrogenase family | 8e-49 | |
| TIGR03240 | 484 | TIGR03240, arg_catab_astD, succinylglutamic semial | 5e-47 | |
| cd07137 | 432 | cd07137, ALDH_F3FHI, Plant aldehyde dehydrogenase | 9e-45 | |
| cd07132 | 443 | cd07132, ALDH_F3AB, Aldehyde dehydrogenase family | 9e-44 | |
| PLN02315 | 508 | PLN02315, PLN02315, aldehyde dehydrogenase family | 2e-43 | |
| cd07123 | 522 | cd07123, ALDH_F4-17_P5CDH, Delta(1)-pyrroline-5-ca | 2e-42 | |
| TIGR01236 | 532 | TIGR01236, D1pyr5carbox1, delta-1-pyrroline-5-carb | 5e-39 | |
| cd06534 | 367 | cd06534, ALDH-SF, NAD(P)+-dependent aldehyde dehyd | 3e-38 | |
| PRK11809 | 1318 | PRK11809, putA, trifunctional transcriptional regu | 2e-37 | |
| PLN02203 | 484 | PLN02203, PLN02203, aldehyde dehydrogenase | 5e-37 | |
| PRK11903 | 521 | PRK11903, PRK11903, aldehyde dehydrogenase; Provis | 3e-30 | |
| PLN02174 | 484 | PLN02174, PLN02174, aldehyde dehydrogenase family | 1e-26 | |
| cd07128 | 513 | cd07128, ALDH_MaoC-N, N-terminal domain of the mon | 4e-25 | |
| cd07084 | 442 | cd07084, ALDH_KGSADH-like, ALDH subfamily: NAD(P)+ | 6e-24 | |
| TIGR02278 | 663 | TIGR02278, PaaN-DH, phenylacetic acid degradation | 9e-21 | |
| PRK11563 | 675 | PRK11563, PRK11563, bifunctional aldehyde dehydrog | 1e-19 | |
| cd07129 | 454 | cd07129, ALDH_KGSADH, Alpha-Ketoglutaric Semialdeh | 1e-15 | |
| cd07077 | 397 | cd07077, ALDH-like, NAD(P)+-dependent aldehyde deh | 1e-09 | |
| cd07126 | 489 | cd07126, ALDH_F12_P5CDH, Delta(1)-pyrroline-5-carb | 6e-08 | |
| cd07081 | 439 | cd07081, ALDH_F20_ACDH_EutE-like, Coenzyme A acyla | 1e-07 | |
| cd07122 | 436 | cd07122, ALDH_F20_ACDH, Coenzyme A acylating aldeh | 1e-06 | |
| cd07121 | 429 | cd07121, ALDH_EutE, Ethanolamine utilization prote | 8e-05 | |
| PRK13805 | 862 | PRK13805, PRK13805, bifunctional acetaldehyde-CoA/ | 7e-04 | |
| TIGR02518 | 488 | TIGR02518, EutH_ACDH, acetaldehyde dehydrogenase ( | 0.001 |
| >gnl|CDD|215410 PLN02766, PLN02766, coniferyl-aldehyde dehydrogenase | Back alignment and domain information |
|---|
Score = 829 bits (2144), Expect = 0.0
Identities = 345/414 (83%), Positives = 380/414 (91%)
Query: 1 MLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMS 60
M+KFADLIEEH E LA L+ +DAGKL + K DIP AA LRYYAGAADKIHGE LKMS
Sbjct: 88 MMKFADLIEEHIEELAALDTIDAGKLFALGKAVDIPAAAGLLRYYAGAADKIHGETLKMS 147
Query: 61 RALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHL 120
R LQGYTL+EPIGVVGHIIPWNFP+TMFFMKV+PALAAGCTM+VKPAEQTPL AL++AHL
Sbjct: 148 RQLQGYTLKEPIGVVGHIIPWNFPSTMFFMKVAPALAAGCTMVVKPAEQTPLSALFYAHL 207
Query: 121 AKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSL 180
AKLAGVPDGV+NVV GFGPTAGAAIASHMD+DKVSFTGST+VGR++MQAAATSNLK VSL
Sbjct: 208 AKLAGVPDGVINVVTGFGPTAGAAIASHMDVDKVSFTGSTEVGRKIMQAAATSNLKQVSL 267
Query: 181 ELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAK 240
ELGGKSPLLIFDD DV+ A D+ALLGI +NKGEICVASSRVYVQEGIYDEF KKLVEKAK
Sbjct: 268 ELGGKSPLLIFDDADVDMAVDLALLGIFYNKGEICVASSRVYVQEGIYDEFVKKLVEKAK 327
Query: 241 AWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIGKKGYYIEPTIFT 300
WVVGDPFDP RQGPQVDK+QF++ILSYIEHGKREGATLLTGGKP G KGYYIEPTIFT
Sbjct: 328 DWVVGDPFDPRARQGPQVDKQQFEKILSYIEHGKREGATLLTGGKPCGDKGYYIEPTIFT 387
Query: 301 NVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSIR 360
+VTEDM IA++EIFGPVM+LMKFKTVEEAIK ANNT+YGLAAGI+TKDL+VANTVSRSIR
Sbjct: 388 DVTEDMKIAQDEIFGPVMSLMKFKTVEEAIKKANNTKYGLAAGIVTKDLDVANTVSRSIR 447
Query: 361 AGIIWINCYFAFDSDCPYGGYKMSGFGRDCGLESLHNYLQVKSVVTPIFNSPWL 414
AG IW+NCYFAFD DCP+GGYKMSGFGRD G+++L YLQVKSVVTP++NSPWL
Sbjct: 448 AGTIWVNCYFAFDPDCPFGGYKMSGFGRDQGMDALDKYLQVKSVVTPLYNSPWL 501
|
Length = 501 |
| >gnl|CDD|143410 cd07091, ALDH_F1-2_Ald2-like, ALDH subfamily: ALDH families 1and 2, including 10-formyltetrahydrofolate dehydrogenase, NAD+-dependent retinal dehydrogenase 1 and related proteins | Back alignment and domain information |
|---|
Score = 667 bits (1724), Expect = 0.0
Identities = 242/405 (59%), Positives = 303/405 (74%)
Query: 1 MLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMS 60
+ K ADLIE + LA LE+LD GK + GD+ + LRYYAG ADKI G+ + +
Sbjct: 71 LNKLADLIERDRDELAALESLDNGKPLEESAKGDVALSIKCLRYYAGWADKIQGKTIPID 130
Query: 61 RALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHL 120
YT REPIGV G IIPWNFP M K++PALAAG T+++KPAEQTPL ALY A L
Sbjct: 131 GNFLAYTRREPIGVCGQIIPWNFPLLMLAWKLAPALAAGNTVVLKPAEQTPLSALYLAEL 190
Query: 121 AKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSL 180
K AG P GV+N+VPGFGPTAGAAI+SHMD+DK++FTGST VGR +M+AAA SNLK V+L
Sbjct: 191 IKEAGFPPGVVNIVPGFGPTAGAAISSHMDVDKIAFTGSTAVGRTIMEAAAKSNLKKVTL 250
Query: 181 ELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAK 240
ELGGKSP ++FDD D++ A + A GI FN+G+ C A SR++VQE IYDEF +K +A+
Sbjct: 251 ELGGKSPNIVFDDADLDKAVEWAAFGIFFNQGQCCCAGSRIFVQESIYDEFVEKFKARAE 310
Query: 241 AWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIGKKGYYIEPTIFT 300
VVGDPFDP QGPQV K QFD+ILSYIE GK+EGATLLTGG+ G KGY+I+PT+FT
Sbjct: 311 KRVVGDPFDPDTFQGPQVSKAQFDKILSYIESGKKEGATLLTGGERHGSKGYFIQPTVFT 370
Query: 301 NVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSIR 360
+V +DM IAK EIFGPV+ ++KFKT +E I+ AN+T YGLAAG+ TKD+N A VSR+++
Sbjct: 371 DVKDDMKIAKEEIFGPVVTILKFKTEDEVIERANDTEYGLAAGVFTKDINKALRVSRALK 430
Query: 361 AGIIWINCYFAFDSDCPYGGYKMSGFGRDCGLESLHNYLQVKSVV 405
AG +W+N Y FD+ P+GG+K SGFGR+ G E L Y QVK+V
Sbjct: 431 AGTVWVNTYNVFDAAVPFGGFKQSGFGRELGEEGLEEYTQVKAVT 475
|
ALDH subfamily which includes the NAD+-dependent retinal dehydrogenase 1 (RALDH 1, ALDH1, EC=1.2.1.36), also known as aldehyde dehydrogenase family 1 member A1 (ALDH1A1), in humans, a homotetrameric, cytosolic enzyme that catalyzes the oxidation of retinaldehyde to retinoic acid. Human ALDH1B1 and ALDH2 are also in this cluster; both are mitochrondrial homotetramers which play important roles in acetaldehyde oxidation; ALDH1B1 in response to UV light exposure and ALDH2 during ethanol metabolism. 10-formyltetrahydrofolate dehydrogenase (FTHFDH, EC=1.5.1.6), also known as aldehyde dehydrogenase family 1 member L1 (ALDH1L1), in humans, a multi-domain homotetramer with an N-terminal formyl transferase domain and a C-terminal ALDH domain. FTHFDH catalyzes an NADP+-dependent dehydrogenase reaction resulting in the conversion of 10-formyltetrahydrofolate to tetrahydrofolate and CO2. Also included in this subfamily is the Arabidosis aldehyde dehydrogenase family 2 members B4 and B7 (EC=1.2.1.3), which are mitochondrial, homotetramers that oxidize acetaldehyde and glycolaldehyde, as well as, the Arabidosis cytosolic, homotetramer ALDH2C4 (EC=1.2.1.3), an enzyme involved in the oxidation of sinapalehyde and coniferaldehyde. Also included is the AldA aldehyde dehydrogenase of Aspergillus nidulans (locus AN0554), the aldehyde dehydrogenase 2 (YMR170c, ALD5, EC=1.2.1.5) of Saccharomyces cerevisiae, and other similar sequences. Length = 476 |
| >gnl|CDD|143460 cd07142, ALDH_F2BC, Arabidosis aldehyde dehydrogenase family 2 B4, B7, C4-like | Back alignment and domain information |
|---|
Score = 661 bits (1708), Expect = 0.0
Identities = 250/406 (61%), Positives = 316/406 (77%)
Query: 1 MLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMS 60
+L+FADL+E+HA+ LA LE D GK + A+ ++P AA RYYAG ADKIHG L
Sbjct: 71 LLRFADLLEKHADELAALETWDNGKPYEQARYAEVPLAARLFRYYAGWADKIHGMTLPAD 130
Query: 61 RALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHL 120
YTL EPIGVVG IIPWNFP MF KV PALA G T+++KPAEQTPL AL A L
Sbjct: 131 GPHHVYTLHEPIGVVGQIIPWNFPLLMFAWKVGPALACGNTIVLKPAEQTPLSALLAAKL 190
Query: 121 AKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSL 180
A AG+PDGVLN+V GFGPTAGAAIASHMD+DKV+FTGST+VG+ +MQ AA SNLKPV+L
Sbjct: 191 AAEAGLPDGVLNIVTGFGPTAGAAIASHMDVDKVAFTGSTEVGKIIMQLAAKSNLKPVTL 250
Query: 181 ELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAK 240
ELGGKSP ++ +D DV+ A ++A + FN+G+ C A SR +V E IYDEF +K +A
Sbjct: 251 ELGGKSPFIVCEDADVDKAVELAHFALFFNQGQCCCAGSRTFVHESIYDEFVEKAKARAL 310
Query: 241 AWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIGKKGYYIEPTIFT 300
VVGDPF V QGPQVDK+QF++ILSYIEHGK EGATL+TGG IG KGYYI+PTIF+
Sbjct: 311 KRVVGDPFRKGVEQGPQVDKEQFEKILSYIEHGKEEGATLITGGDRIGSKGYYIQPTIFS 370
Query: 301 NVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSIR 360
+V +DM IA++EIFGPV +++KFKTV+E IK ANN++YGLAAG+ +K+++ ANT+SR+++
Sbjct: 371 DVKDDMKIARDEIFGPVQSILKFKTVDEVIKRANNSKYGLAAGVFSKNIDTANTLSRALK 430
Query: 361 AGIIWINCYFAFDSDCPYGGYKMSGFGRDCGLESLHNYLQVKSVVT 406
AG +W+NCY FD+ P+GGYKMSG GR+ G+ +L+NYLQVK+VV
Sbjct: 431 AGTVWVNCYDVFDASIPFGGYKMSGIGREKGIYALNNYLQVKAVVM 476
|
Included in this CD is the Arabidosis aldehyde dehydrogenase family 2 members B4 and B7 (EC=1.2.1.3), which are mitochondrial homotetramers that oxidize acetaldehyde and glycolaldehyde, but not L-lactaldehyde. Also in this group, is the Arabidosis cytosolic, homotetramer ALDH2C4 (EC=1.2.1.3), an enzyme involved in the oxidation of sinapalehyde and coniferaldehyde. Length = 476 |
| >gnl|CDD|143459 cd07141, ALDH_F1AB_F2_RALDH1, NAD+-dependent retinal dehydrogenase 1, ALDH families 1A, 1B, and 2-like | Back alignment and domain information |
|---|
Score = 615 bits (1589), Expect = 0.0
Identities = 233/405 (57%), Positives = 290/405 (71%)
Query: 1 MLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMS 60
+ K ADLIE LA LE LD GK S + + D+PGA LRYYAG ADKIHG+ + M
Sbjct: 75 LNKLADLIERDRAYLASLETLDNGKPFSKSYLVDLPGAIKVLRYYAGWADKIHGKTIPMD 134
Query: 61 RALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHL 120
YT EP+GV G IIPWNFP M K++PALA G T+++KPAEQTPL ALY A L
Sbjct: 135 GDFFTYTRHEPVGVCGQIIPWNFPLLMAAWKLAPALACGNTVVLKPAEQTPLTALYLASL 194
Query: 121 AKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSL 180
K AG P GV+NVVPG+GPTAGAAI+SH DIDKV+FTGST+VG+ + QAA SNLK V+L
Sbjct: 195 IKEAGFPPGVVNVVPGYGPTAGAAISSHPDIDKVAFTGSTEVGKLIQQAAGKSNLKRVTL 254
Query: 181 ELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAK 240
ELGGKSP ++F D D++ A + A + FN G+ C A SR +VQE IYDEF K+ VE+AK
Sbjct: 255 ELGGKSPNIVFADADLDYAVEQAHEALFFNMGQCCCAGSRTFVQESIYDEFVKRSVERAK 314
Query: 241 AWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIGKKGYYIEPTIFT 300
VVG+PFDP QGPQ+D++QF +IL IE GK+EGA L GGK G KGY+I+PT+F+
Sbjct: 315 KRVVGNPFDPKTEQGPQIDEEQFKKILELIESGKKEGAKLECGGKRHGDKGYFIQPTVFS 374
Query: 301 NVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSIR 360
+VT+DM IAK EIFGPV + KFKT++E I+ ANNT YGLAA + TKD++ A T S ++R
Sbjct: 375 DVTDDMRIAKEEIFGPVQQIFKFKTIDEVIERANNTTYGLAAAVFTKDIDKAITFSNALR 434
Query: 361 AGIIWINCYFAFDSDCPYGGYKMSGFGRDCGLESLHNYLQVKSVV 405
AG +W+NCY P+GGYKMSG GR+ G L Y +VK+V
Sbjct: 435 AGTVWVNCYNVVSPQAPFGGYKMSGNGRELGEYGLQEYTEVKTVT 479
|
NAD+-dependent retinal dehydrogenase 1 (RALDH 1, ALDH1, EC=1.2.1.36) also known as aldehyde dehydrogenase family 1 member A1 (ALDH1A1) in humans, is a homotetrameric, cytosolic enzyme that catalyzes the oxidation of retinaldehyde to retinoic acid. Human ALDH1B1 and ALDH2 are also in this cluster; both are mitochrondrial homotetramers which play important roles in acetaldehyde oxidation; ALDH1B1 in response to UV light exposure and ALDH2 during ethanol metabolism. Length = 481 |
| >gnl|CDD|215767 pfam00171, Aldedh, Aldehyde dehydrogenase family | Back alignment and domain information |
|---|
Score = 582 bits (1502), Expect = 0.0
Identities = 215/405 (53%), Positives = 284/405 (70%), Gaps = 3/405 (0%)
Query: 1 MLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMS 60
+LK ADL+EE + LA LE L+ GK + A+ G++P A +TLRYYAG A K+ GE L
Sbjct: 57 LLKAADLLEERRDELAELETLETGKPLAEAR-GEVPRAIDTLRYYAGLARKLEGETLPSD 115
Query: 61 RALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHL 120
+ YT REP+GVVG I PWNFP + K++PALAAG T+++KP+E TPL AL A L
Sbjct: 116 PGVLAYTRREPLGVVGAITPWNFPLLLAAWKIAPALAAGNTVVLKPSELTPLTALLLAEL 175
Query: 121 AKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSL 180
+ AG+P GVLNVV G G G A+ H D+DKVSFTGST+VGR++ +AAA NLK V+L
Sbjct: 176 FEEAGLPPGVLNVVTGSGSEVGDALVEHPDVDKVSFTGSTEVGRRIAKAAA-KNLKRVTL 234
Query: 181 ELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAK 240
ELGGK+PL++FDD D++ A + A+ G N G++C A SR+ V E IYDEF ++LVE AK
Sbjct: 235 ELGGKNPLIVFDDADLDAAVEGAVFGAFGNAGQVCTAGSRLLVHESIYDEFVERLVEAAK 294
Query: 241 AWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIGKKGYYIEPTIFT 300
+ VGDP DP GP + KKQ +R+LSYIE K EGA LL GG+ +KGY++EPT+
Sbjct: 295 SLKVGDPLDPDTDIGPLISKKQRERVLSYIEDAKEEGAKLLCGGEAGLEKGYFVEPTVLA 354
Query: 301 NVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSIR 360
+VT DM IA+ EIFGPV++++ FK +EAI+ AN+T YGLAAG+ T DL A V+R +
Sbjct: 355 DVTPDMRIAQEEIFGPVLSVIPFKDEDEAIELANDTEYGLAAGVFTNDLERALRVARRLE 414
Query: 361 AGIIWINCYFAFDSD-CPYGGYKMSGFGRDCGLESLHNYLQVKSV 404
AG++WIN Y D + P+GG+K SGFGR+ G E L Y + K+V
Sbjct: 415 AGMVWINDYTTGDPEALPFGGFKQSGFGREGGKEGLEEYTETKTV 459
|
This family of dehydrogenases act on aldehyde substrates. Members use NADP as a cofactor. The family includes the following members: The prototypical members are the aldehyde dehydrogenases EC:1.2.1.3. Succinate-semialdehyde dehydrogenase EC:1.2.1.16. Lactaldehyde dehydrogenase EC:1.2.1.22. Benzaldehyde dehydrogenase EC:1.2.1.28. Methylmalonate-semialdehyde dehydrogenase EC:1.2.1.27. Glyceraldehyde-3-phosphate dehydrogenase EC:1.2.1.9. Delta-1-pyrroline-5-carboxylate dehydrogenase EC: 1.5.1.12. Acetaldehyde dehydrogenase EC:1.2.1.10. Glutamate-5-semialdehyde dehydrogenase EC:1.2.1.41. This family also includes omega crystallin, an eye lens protein from squid and octopus that has little aldehyde dehydrogenase activity. Length = 459 |
| >gnl|CDD|215259 PLN02466, PLN02466, aldehyde dehydrogenase family 2 member | Back alignment and domain information |
|---|
Score = 570 bits (1470), Expect = 0.0
Identities = 240/418 (57%), Positives = 307/418 (73%), Gaps = 8/418 (1%)
Query: 1 MLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMS 60
+L+FADL+E+H + LA LE D GK + + ++P A RYYAG ADKIHG +
Sbjct: 125 LLRFADLLEKHNDELAALETWDNGKPYEQSAKAELPMFARLFRYYAGWADKIHGLTVPAD 184
Query: 61 RALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHL 120
TL EPIGV G IIPWNFP MF KV PALA G T+++K AEQTPL ALY A L
Sbjct: 185 GPHHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYAAKL 244
Query: 121 AKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSL 180
AG+P GVLNVV GFGPTAGAA+ASHMD+DK++FTGSTD G+ V++ AA SNLKPV+L
Sbjct: 245 LHEAGLPPGVLNVVSGFGPTAGAALASHMDVDKLAFTGSTDTGKIVLELAAKSNLKPVTL 304
Query: 181 ELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAK 240
ELGGKSP ++ +D DV+ A ++A + FN+G+ C A SR +V E +YDEF VEKAK
Sbjct: 305 ELGGKSPFIVCEDADVDKAVELAHFALFFNQGQCCCAGSRTFVHERVYDEF----VEKAK 360
Query: 241 A----WVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIGKKGYYIEP 296
A VVGDPF V QGPQ+D +QF++IL YI+ G GATL GG G KGYYI+P
Sbjct: 361 ARALKRVVGDPFKKGVEQGPQIDSEQFEKILRYIKSGVESGATLECGGDRFGSKGYYIQP 420
Query: 297 TIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVS 356
T+F+NV +DMLIA++EIFGPV +++KFK ++E I+ ANNTRYGLAAG+ T++L+ ANT+S
Sbjct: 421 TVFSNVQDDMLIAQDEIFGPVQSILKFKDLDEVIRRANNTRYGLAAGVFTQNLDTANTLS 480
Query: 357 RSIRAGIIWINCYFAFDSDCPYGGYKMSGFGRDCGLESLHNYLQVKSVVTPIFNSPWL 414
R++R G +W+NC+ FD+ P+GGYKMSG GR+ G+ SL+NYLQVK+VVTP+ N WL
Sbjct: 481 RALRVGTVWVNCFDVFDAAIPFGGYKMSGIGREKGIYSLNNYLQVKAVVTPLKNPAWL 538
|
Length = 538 |
| >gnl|CDD|143430 cd07112, ALDH_GABALDH-PuuC, Escherichia coli NADP+-dependent gamma-glutamyl-gamma-aminobutyraldehyde dehydrogenase PuuC-like | Back alignment and domain information |
|---|
Score = 562 bits (1451), Expect = 0.0
Identities = 208/407 (51%), Positives = 280/407 (68%), Gaps = 3/407 (0%)
Query: 1 MLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMS 60
+L+ ADLIE H + LA+LE LD GK S A D+P AANT R+YA A DK++GEV
Sbjct: 54 LLRLADLIEAHRDELALLETLDMGKPISDALAVDVPSAANTFRWYAEAIDKVYGEVAPTG 113
Query: 61 RALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHL 120
REP+GVVG ++PWNFP M K++PALAAG ++++KPAEQ+PL AL A L
Sbjct: 114 PDALALITREPLGVVGAVVPWNFPLLMAAWKIAPALAAGNSVVLKPAEQSPLTALRLAEL 173
Query: 121 AKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSL 180
A AG+P GVLNVVPGFG TAG A+ HMD+D ++FTGST+VGR+ ++ + SNLK V L
Sbjct: 174 ALEAGLPAGVLNVVPGFGHTAGEALGLHMDVDALAFTGSTEVGRRFLEYSGQSNLKRVWL 233
Query: 181 ELGGKSPLLIFDDV-DVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKA 239
E GGKSP ++F D D++ AA+ A GI +N+GE+C A SR+ V E I DEF +K+V A
Sbjct: 234 ECGGKSPNIVFADAPDLDAAAEAAAAGIFWNQGEVCSAGSRLLVHESIKDEFLEKVVAAA 293
Query: 240 KAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIGK--KGYYIEPT 297
+ W GDP DPA R G V + FD++L YIE GK EGA L+ GGK + G+++EPT
Sbjct: 294 REWKPGDPLDPATRMGALVSEAHFDKVLGYIESGKAEGARLVAGGKRVLTETGGFFVEPT 353
Query: 298 IFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVSR 357
+F VT DM IA+ EIFGPV++++ F + EEA+ AN++ YGLAA + T DL+ A+ V+R
Sbjct: 354 VFDGVTPDMRIAREEIFGPVLSVITFDSEEEAVALANDSVYGLAASVWTSDLSRAHRVAR 413
Query: 358 SIRAGIIWINCYFAFDSDCPYGGYKMSGFGRDCGLESLHNYLQVKSV 404
+RAG +W+NC+ D P+GG+K SG GRD L +L Y ++K+
Sbjct: 414 RLRAGTVWVNCFDEGDITTPFGGFKQSGNGRDKSLHALDKYTELKTT 460
|
NADP+-dependent, gamma-glutamyl-gamma-aminobutyraldehyde dehydrogenase (GABALDH) PuuC of Escherichia coli which catalyzes the conversion of putrescine to 4-aminobutanoate and other similar sequences are present in this CD. Length = 462 |
| >gnl|CDD|143397 cd07078, ALDH, NAD(P)+ dependent aldehyde dehydrogenase family | Back alignment and domain information |
|---|
Score = 543 bits (1401), Expect = 0.0
Identities = 209/409 (51%), Positives = 270/409 (66%), Gaps = 5/409 (1%)
Query: 1 MLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLK-M 59
+ K ADL+EE E LA LE L+ GK A G++ AA+T RYYAG A ++HGEV+
Sbjct: 26 LRKLADLLEERREELAALETLETGKPIEEAL-GEVARAADTFRYYAGLARRLHGEVIPSP 84
Query: 60 SRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAH 119
REP+GVVG I PWNFP + K++PALAAG T+++KP+E TPL AL A
Sbjct: 85 DPGELAIVRREPLGVVGAITPWNFPLLLAAWKLAPALAAGNTVVLKPSELTPLTALLLAE 144
Query: 120 LAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVS 179
L AG+P GVLNVV G G GAA+ASH +DK+SFTGST VG+ +M+AAA NLK V+
Sbjct: 145 LLAEAGLPPGVLNVVTGDGDEVGAALASHPRVDKISFTGSTAVGKAIMRAAA-ENLKRVT 203
Query: 180 LELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKA 239
LELGGKSPL++FDD D++ A A+ G N G++C A+SR+ V E IYDEF ++LVE+
Sbjct: 204 LELGGKSPLIVFDDADLDAAVKGAVFGAFGNAGQVCTAASRLLVHESIYDEFVERLVERV 263
Query: 240 KAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPI-GKKGYYIEPTI 298
KA VG+P DP GP + Q DR+L+YIE K EGA LL GGK + G KGY++ PT+
Sbjct: 264 KALKVGNPLDPDTDMGPLISAAQLDRVLAYIEDAKAEGAKLLCGGKRLEGGKGYFVPPTV 323
Query: 299 FTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRS 358
T+V DM IA+ EIFGPV+ ++ FK EEAI+ AN+T YGLAAG+ T+DL A V+
Sbjct: 324 LTDVDPDMPIAQEEIFGPVLPVIPFKDEEEAIELANDTEYGLAAGVFTRDLERALRVAER 383
Query: 359 IRAGIIWINCYFAFDSD-CPYGGYKMSGFGRDCGLESLHNYLQVKSVVT 406
+ AG +WIN Y P+GG K SG GR+ G L Y + K+V
Sbjct: 384 LEAGTVWINDYSVGAEPSAPFGGVKQSGIGREGGPYGLEEYTEPKTVTI 432
|
The aldehyde dehydrogenase family (ALDH) of NAD(P)+ dependent enzymes, in general, oxidize a wide range of endogenous and exogenous aliphatic and aromatic aldehydes to their corresponding carboxylic acids and play an important role in detoxification. Besides aldehyde detoxification, many ALDH isozymes possess multiple additional catalytic and non-catalytic functions such as participating in metabolic pathways, or as binding proteins, or as osmoregulants, to mention a few. The enzyme has three domains, a NAD(P)+ cofactor-binding domain, a catalytic domain, and a bridging domain; and the active enzyme is generally either homodimeric or homotetrameric. The catalytic mechanism is proposed to involve cofactor binding, resulting in a conformational change and activation of an invariant catalytic cysteine nucleophile. The cysteine and aldehyde substrate form an oxyanion thiohemiacetal intermediate resulting in hydride transfer to the cofactor and formation of a thioacylenzyme intermediate. Hydrolysis of the thioacylenzyme and release of the carboxylic acid product occurs, and in most cases, the reduced cofactor dissociates from the enzyme. The evolutionary phylogenetic tree of ALDHs appears to have an initial bifurcation between what has been characterized as the classical aldehyde dehydrogenases, the ALDH family (ALDH) and extended family members or aldehyde dehydrogenase-like (ALDH-like) proteins. The ALDH proteins are represented by enzymes which share a number of highly conserved residues necessary for catalysis and cofactor binding and they include such proteins as retinal dehydrogenase, 10-formyltetrahydrofolate dehydrogenase, non-phosphorylating glyceraldehyde 3-phosphate dehydrogenase, delta(1)-pyrroline-5-carboxylate dehydrogenases, alpha-ketoglutaric semialdehyde dehydrogenase, alpha-aminoadipic semialdehyde dehydrogenase, coniferyl aldehyde dehydrogenase and succinate-semialdehyde dehydrogenase. Included in this larger group are all human, Arabidopsis, Tortula, fungal, protozoan, and Drosophila ALDHs identified in families ALDH1 through ALDH22 with the exception of families ALDH18, ALDH19, and ALDH20 which are present in the ALDH-like group. Length = 432 |
| >gnl|CDD|143461 cd07143, ALDH_AldA_AN0554, Aspergillus nidulans aldehyde dehydrogenase, AldA (AN0554)-like | Back alignment and domain information |
|---|
Score = 538 bits (1388), Expect = 0.0
Identities = 232/404 (57%), Positives = 292/404 (72%)
Query: 1 MLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMS 60
+ K ADL+E + + LA +EALD GK AK D+ +A+T RYY G ADKIHG+V++
Sbjct: 74 LSKLADLMERNLDYLASIEALDNGKTFGTAKRVDVQASADTFRYYGGWADKIHGQVIETD 133
Query: 61 RALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHL 120
YT EPIGV G IIPWNFP M K++PALAAG T+++KP+E TPL ALY L
Sbjct: 134 IKKLTYTRHEPIGVCGQIIPWNFPLLMCAWKIAPALAAGNTIVLKPSELTPLSALYMTKL 193
Query: 121 AKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSL 180
AG P GV+NVV G+G T G AI+SHMDIDKV+FTGST VGR+VM+AAA SNLK V+L
Sbjct: 194 IPEAGFPPGVINVVSGYGRTCGNAISSHMDIDKVAFTGSTLVGRKVMEAAAKSNLKKVTL 253
Query: 181 ELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAK 240
ELGGKSP ++FDD D+ +A GI FN G++C A SR+YVQEGIYD+F K+ EKAK
Sbjct: 254 ELGGKSPNIVFDDADLESAVVWTAYGIFFNHGQVCCAGSRIYVQEGIYDKFVKRFKEKAK 313
Query: 241 AWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIGKKGYYIEPTIFT 300
VGDPF QGPQV + Q++RI+SYIE GK EGAT+ TGGK G +GY+IEPTIFT
Sbjct: 314 KLKVGDPFAEDTFQGPQVSQIQYERIMSYIESGKAEGATVETGGKRHGNEGYFIEPTIFT 373
Query: 301 NVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSIR 360
+VTEDM I K EIFGPV+A++KFKT EEAIK AN++ YGLAA + T ++N A V+ +++
Sbjct: 374 DVTEDMKIVKEEIFGPVVAVIKFKTEEEAIKRANDSTYGLAAAVFTNNINNAIRVANALK 433
Query: 361 AGIIWINCYFAFDSDCPYGGYKMSGFGRDCGLESLHNYLQVKSV 404
AG +W+NCY P+GGYK SG GR+ G +L NY Q+K+V
Sbjct: 434 AGTVWVNCYNLLHHQVPFGGYKQSGIGRELGEYALENYTQIKAV 477
|
NAD(P)+-dependent aldehyde dehydrogenase (AldA) of Aspergillus nidulans (locus AN0554), and other similar sequences, are present in this CD. Length = 481 |
| >gnl|CDD|143462 cd07144, ALDH_ALD2-YMR170C, Saccharomyces cerevisiae aldehyde dehydrogenase 2 (YMR170c)-like | Back alignment and domain information |
|---|
Score = 531 bits (1370), Expect = 0.0
Identities = 220/410 (53%), Positives = 286/410 (69%), Gaps = 9/410 (2%)
Query: 1 MLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMS 60
+ K ADL+E++ ++LA +EALD+GK + +GD+ +RYYAG ADKI G+ + S
Sbjct: 74 LDKLADLVEKNRDLLAAIEALDSGKPYHSNALGDLDEIIAVIRYYAGWADKIQGKTIPTS 133
Query: 61 RALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHL 120
YTL EP GV G IIPWN+P M K++PALAAG T+++KPAE TPL LYFA+L
Sbjct: 134 PNKLAYTLHEPYGVCGQIIPWNYPLAMAAWKLAPALAAGNTVVIKPAENTPLSLLYFANL 193
Query: 121 AKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSL 180
K AG P GV+N++PG+G AG+A+A H D+DK++FTGST GR VM+AAA NLK V+L
Sbjct: 194 VKEAGFPPGVVNIIPGYGAVAGSALAEHPDVDKIAFTGSTATGRLVMKAAA-QNLKAVTL 252
Query: 181 ELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAK 240
E GGKSP L+F+D D++ A A GI++N G+ C A+SR+YVQE IYD+F +K VE K
Sbjct: 253 ECGGKSPALVFEDADLDQAVKWAAAGIMYNSGQNCTATSRIYVQESIYDKFVEKFVEHVK 312
Query: 241 -AWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGG---KPIGKKGYYIEP 296
+ VG PFD GPQV K Q+DR+LSYIE GK+EGA L+ GG KGY+I P
Sbjct: 313 QNYKVGSPFDDDTVVGPQVSKTQYDRVLSYIEKGKKEGAKLVYGGEKAPEGLGKGYFIPP 372
Query: 297 TIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVS 356
TIFT+V +DM I K EIFGPV+ + KFKT EEAIK AN+T YGLAA + TKD+ A+ V+
Sbjct: 373 TIFTDVPQDMRIVKEEIFGPVVVISKFKTYEEAIKKANDTTYGLAAAVFTKDIRRAHRVA 432
Query: 357 RSIRAGIIWINCYFAFDSD--CPYGGYKMSGFGRDCGLESLHNYLQVKSV 404
R + AG++WIN + DSD P+GG+KMSG GR+ G L Y Q K+V
Sbjct: 433 RELEAGMVWINS--SNDSDVGVPFGGFKMSGIGRELGEYGLETYTQTKAV 480
|
NAD(P)+-dependent Saccharomyces cerevisiae aldehyde dehydrogenase 2 (YMR170c, ALD5, EC=1.2.1.5) and other similar sequences, are present in this CD. Length = 484 |
| >gnl|CDD|143433 cd07115, ALDH_HMSADH_HapE, Pseudomonas fluorescens 4-hydroxymuconic semialdehyde dehydrogenase-like | Back alignment and domain information |
|---|
Score = 517 bits (1333), Expect = 0.0
Identities = 216/404 (53%), Positives = 284/404 (70%), Gaps = 1/404 (0%)
Query: 1 MLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMS 60
+ + A+LI +A+ LA LE+LD GK A+ D+P AA+T RYYAG ADKI GEV+ +
Sbjct: 47 LWRLAELILANADELARLESLDTGKPIRAARRLDVPRAADTFRYYAGWADKIEGEVIPVR 106
Query: 61 RALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHL 120
YT+REP+GVVG I+PWNFP KV+PALAAG T+++KPAE TPL AL A L
Sbjct: 107 GPFLNYTVREPVGVVGAIVPWNFPLMFAAWKVAPALAAGNTVVLKPAELTPLSALRIAEL 166
Query: 121 AKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSL 180
AG P GVLNVV GFG AGAA+ H D+DK++FTGST VGR++MQ AA NLK VSL
Sbjct: 167 MAEAGFPAGVLNVVTGFGEVAGAALVEHPDVDKITFTGSTAVGRKIMQGAA-GNLKRVSL 225
Query: 181 ELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAK 240
ELGGKS ++F D D++ A A GI +N+G++C A SR+ V E IYDEF ++ A+
Sbjct: 226 ELGGKSANIVFADADLDAAVRAAATGIFYNQGQMCTAGSRLLVHESIYDEFLERFTSLAR 285
Query: 241 AWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIGKKGYYIEPTIFT 300
+ GDP DP + GP V + QFDR+L Y++ G+ EGA LLTGGK G +G+++EPTIF
Sbjct: 286 SLRPGDPLDPKTQMGPLVSQAQFDRVLDYVDVGREEGARLLTGGKRPGARGFFVEPTIFA 345
Query: 301 NVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSIR 360
V +M IA+ EIFGPV+++M+F+ EEA++ AN T YGLAAG+ T+DL A+ V+ +++
Sbjct: 346 AVPPEMRIAQEEIFGPVVSVMRFRDEEEALRIANGTEYGLAAGVWTRDLGRAHRVAAALK 405
Query: 361 AGIIWINCYFAFDSDCPYGGYKMSGFGRDCGLESLHNYLQVKSV 404
AG +WIN Y FD P+GGYK SGFGR+ G E+L Y +VKSV
Sbjct: 406 AGTVWINTYNRFDPGSPFGGYKQSGFGREMGREALDEYTEVKSV 449
|
4-hydroxymuconic semialdehyde dehydrogenase (HapE, EC=1.2.1.61) of Pseudomonas fluorescens ACB involved in 4-hydroxyacetophenone degradation, and putative hydroxycaproate semialdehyde dehydrogenase (ChnE) of Brachymonas petroleovorans involved in cyclohexane metabolism, and other similar sequences, are present in this CD. Length = 453 |
| >gnl|CDD|143432 cd07114, ALDH_DhaS, Uncharacterized Candidatus pelagibacter aldehyde dehydrogenase, DhaS-like | Back alignment and domain information |
|---|
Score = 516 bits (1331), Expect = 0.0
Identities = 193/411 (46%), Positives = 264/411 (64%), Gaps = 9/411 (2%)
Query: 1 MLKFADLIEEHAEVLAVLEALDAGKLHSWAKM-GDIPGAANTLRYYAGAADKIHGEVLKM 59
+ + ADLIE +AE LA LE D GKL + + A RYYAG ADKI G V+ +
Sbjct: 49 LRRLADLIEANAEELAELETRDNGKL--IRETRAQVRYLAEWYRYYAGLADKIEGAVIPV 106
Query: 60 SRA-LQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFA 118
+ +T REP+GVV I PWN P + K++PALAAG T+++KP+E TP L A
Sbjct: 107 DKGDYLNFTRREPLGVVAAITPWNSPLLLLAKKLAPALAAGNTVVLKPSEHTPASTLELA 166
Query: 119 HLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPV 178
LA+ AG P GV+NVV GFGP G A+ H + K++FTG T+ GR + +AAA NL PV
Sbjct: 167 KLAEEAGFPPGVVNVVTGFGPETGEALVEHPLVAKIAFTGGTETGRHIARAAA-ENLAPV 225
Query: 179 SLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEK 238
+LELGGKSP ++FDD D++ A + + GI G+ CVA SR+ VQ IYDEF ++LV +
Sbjct: 226 TLELGGKSPNIVFDDADLDAAVNGVVAGIFAAAGQTCVAGSRLLVQRSIYDEFVERLVAR 285
Query: 239 AKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIG----KKGYYI 294
A+A VGDP DP + GP ++Q +++ Y+ + EGA +LTGG+ GY+
Sbjct: 286 ARAIRVGDPLDPETQMGPLATERQLEKVERYVARAREEGARVLTGGERPSGADLGAGYFF 345
Query: 295 EPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANT 354
EPTI +VT DM IA+ E+FGPV++++ F EEAI AN++ YGLAAGI T+DL A+
Sbjct: 346 EPTILADVTNDMRIAQEEVFGPVLSVIPFDDEEEAIALANDSEYGLAAGIWTRDLARAHR 405
Query: 355 VSRSIRAGIIWINCYFAFDSDCPYGGYKMSGFGRDCGLESLHNYLQVKSVV 405
V+R+I AG +W+N Y A P+GG+K SG GR+ G+E++ Y Q KSV
Sbjct: 406 VARAIEAGTVWVNTYRALSPSSPFGGFKDSGIGRENGIEAIREYTQTKSVW 456
|
Uncharacterized aldehyde dehydrogenase from Candidatus pelagibacter (DhaS) and other related sequences are present in this CD. Length = 457 |
| >gnl|CDD|223944 COG1012, PutA, NAD-dependent aldehyde dehydrogenases [Energy production and conversion] | Back alignment and domain information |
|---|
Score = 500 bits (1289), Expect = e-176
Identities = 202/406 (49%), Positives = 270/406 (66%), Gaps = 6/406 (1%)
Query: 1 MLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMS 60
+ + ADL+E AE LA L L+ GK S A+ G+I AA+ +RYYA A ++ GE +
Sbjct: 64 LRRIADLLEARAEELAALITLETGKPISEAR-GEIARAADFIRYYAEEARRLEGETIPTD 122
Query: 61 RALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHL 120
+ + REP+GVVG I PWNFP + K++PALAAG T+++KP+EQTPL AL A L
Sbjct: 123 KGSKALVRREPLGVVGAITPWNFPLALAAWKLAPALAAGNTVVLKPSEQTPLSALALAEL 182
Query: 121 AKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSL 180
A AG+P GVLNVV G G G A+ +H D+D +SFTGST VGR + AAA +NLKPV+L
Sbjct: 183 AAEAGLPAGVLNVVTGGGAEVGDALVAHPDVDAISFTGSTAVGRAIAAAAA-ANLKPVTL 241
Query: 181 ELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAK 240
ELGGKSP ++ +D D++ A D A+ G FN G+ C A+SR+ V E +YDEF ++LV +A
Sbjct: 242 ELGGKSPAIVLEDADLDAAVDAAVFGAFFNAGQRCTAASRLIVHESVYDEFVERLVARAA 301
Query: 241 AWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIGKKGYYIEPTIFT 300
+ VGDP DP+ GP + ++Q DR+ YIE EGA LL GGK G GY++EPTI
Sbjct: 302 SLKVGDPLDPSTDLGPLISEEQLDRVEGYIEDAVAEGARLLAGGKRPG--GYFVEPTILE 359
Query: 301 NVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSIR 360
VT DM IA+ EIFGPV+ +++FK EEAI+ AN+T YGLAA I T+DL A V+R +
Sbjct: 360 GVTPDMRIAREEIFGPVLPVIRFKDEEEAIELANDTEYGLAAAIFTRDLARAFRVARRLE 419
Query: 361 AGIIWINCY--FAFDSDCPYGGYKMSGFGRDCGLESLHNYLQVKSV 404
AG++ IN Y A + P+GG K SG GR+ G L + +VK+V
Sbjct: 420 AGMVGINDYTGGADIAYLPFGGVKQSGLGREGGKYGLEEFTEVKTV 465
|
Length = 472 |
| >gnl|CDD|143412 cd07093, ALDH_F8_HMSADH, Human aldehyde dehydrogenase family 8 member A1-like | Back alignment and domain information |
|---|
Score = 499 bits (1286), Expect = e-176
Identities = 195/408 (47%), Positives = 267/408 (65%), Gaps = 5/408 (1%)
Query: 1 MLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMS 60
+ K ADLIE A+ LA+LE+LD GK + A+ DIP AA R++A ++ GE
Sbjct: 47 LHKVADLIEARADELALLESLDTGKPITLARTRDIPRAAANFRFFADYILQLDGESYPQD 106
Query: 61 RALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHL 120
Y LR+P+GV G I PWN P + K++PALA G T+++KP+E TPL A A L
Sbjct: 107 GGALNYVLRQPVGVAGLITPWNLPLMLLTWKIAPALAFGNTVVLKPSEWTPLTAWLLAEL 166
Query: 121 AKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSL 180
A AG+P GV+NVV GFGP AGAA+ +H D+D +SFTG T GR +M+AAA NLKPVSL
Sbjct: 167 ANEAGLPPGVVNVVHGFGPEAGAALVAHPDVDLISFTGETATGRTIMRAAA-PNLKPVSL 225
Query: 181 ELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAK 240
ELGGK+P ++F D D++ A D A+ N GE+C+A SR+ VQ IYDEF ++ VE+AK
Sbjct: 226 ELGGKNPNIVFADADLDRAVDAAVRSSFSNNGEVCLAGSRILVQRSIYDEFLERFVERAK 285
Query: 241 AWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIG----KKGYYIEP 296
A VGDP DP GP + K+ +++L Y+E + EGAT+LTGG + GY++EP
Sbjct: 286 ALKVGDPLDPDTEVGPLISKEHLEKVLGYVELARAEGATILTGGGRPELPDLEGGYFVEP 345
Query: 297 TIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVS 356
T+ T + D +A+ EIFGPV+ ++ F EEAI+ AN+T YGLAA + T+DL A+ V+
Sbjct: 346 TVITGLDNDSRVAQEEIFGPVVTVIPFDDEEEAIELANDTPYGLAAYVWTRDLGRAHRVA 405
Query: 357 RSIRAGIIWINCYFAFDSDCPYGGYKMSGFGRDCGLESLHNYLQVKSV 404
R + AG +W+NC+ D P+GG K SG GR+ G SL Y ++K+V
Sbjct: 406 RRLEAGTVWVNCWLVRDLRTPFGGVKASGIGREGGDYSLEFYTELKNV 453
|
In humans, the aldehyde dehydrogenase family 8 member A1 (ALDH8A1) protein functions to convert 9-cis-retinal to 9-cis-retinoic acid and has a preference for NAD+. Also included in this CD is the 2-hydroxymuconic semialdehyde dehydrogenase (HMSADH) which catalyzes the conversion of 2-hydroxymuconic semialdehyde to 4-oxalocrotonate, a step in the meta cleavage pathway of aromatic hydrocarbons in bacteria. Such HMSADHs seen here are: XylG of the TOL plasmid pWW0 of Pseudomonas putida, TomC of Burkholderia cepacia G4, and AphC of Comamonas testosterone. Length = 455 |
| >gnl|CDD|143437 cd07119, ALDH_BADH-GbsA, Bacillus subtilis NAD+-dependent betaine aldehyde dehydrogenase-like | Back alignment and domain information |
|---|
Score = 477 bits (1231), Expect = e-167
Identities = 193/408 (47%), Positives = 260/408 (63%), Gaps = 6/408 (1%)
Query: 1 MLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMS 60
+ + AD I E AE LA LE L+ GK ++ DI AN RYYAG A K GEV +
Sbjct: 65 LFRIADKIREDAEELARLETLNTGKTLRESE-IDIDDVANCFRYYAGLATKETGEVYDVP 123
Query: 61 RALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHL 120
+ T+REP+GV G I PWN+P K++PALAAG T+++KP+E TPL + L
Sbjct: 124 PHVISRTVREPVGVCGLITPWNYPLLQAAWKLAPALAAGNTVVIKPSEVTPLTTIALFEL 183
Query: 121 AKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSL 180
+ AG+P GV+N+V G G T GA +A D+D VSFTG T GR +M+AAA N+K V+L
Sbjct: 184 IEEAGLPAGVVNLVTGSGATVGAELAESPDVDLVSFTGGTATGRSIMRAAA-GNVKKVAL 242
Query: 181 ELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAK 240
ELGGK+P ++F D D TA D AL G+ FN G++C A SR+ V+E I+D+F L E+AK
Sbjct: 243 ELGGKNPNIVFADADFETAVDQALNGVFFNAGQVCSAGSRLLVEESIHDKFVAALAERAK 302
Query: 241 AWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGK-PIGK---KGYYIEP 296
+G+ D GP V + +++LSYI+ GK EGA L+ GGK P G KGY++EP
Sbjct: 303 KIKLGNGLDADTEMGPLVSAEHREKVLSYIQLGKEEGARLVCGGKRPTGDELAKGYFVEP 362
Query: 297 TIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVS 356
TIF +V M I + EIFGPV+ + +F T EEAI+ AN+T YGLA + TKD+ AN V+
Sbjct: 363 TIFDDVDRTMRIVQEEIFGPVLTVERFDTEEEAIRLANDTPYGLAGAVWTKDIARANRVA 422
Query: 357 RSIRAGIIWINCYFAFDSDCPYGGYKMSGFGRDCGLESLHNYLQVKSV 404
R +RAG +WIN Y + ++ P+GGYK SG GR+ G L Y + K +
Sbjct: 423 RRLRAGTVWINDYHPYFAEAPWGGYKQSGIGRELGPTGLEEYQETKHI 470
|
Included in this CD is the NAD+-dependent, betaine aldehyde dehydrogenase (BADH, GbsA, EC=1.2.1.8) of Bacillus subtilis involved in the synthesis of the osmoprotectant glycine betaine from choline or glycine betaine aldehyde. Length = 482 |
| >gnl|CDD|143421 cd07103, ALDH_F5_SSADH_GabD, Mitochondrial succinate-semialdehyde dehydrogenase and ALDH family members 5A1 and 5F1-like | Back alignment and domain information |
|---|
Score = 466 bits (1202), Expect = e-163
Identities = 180/405 (44%), Positives = 259/405 (63%), Gaps = 3/405 (0%)
Query: 1 MLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMS 60
+ ++ADLI E AE LA L L+ GK + A+ G++ AA+ L ++A A +I+G +
Sbjct: 47 LRRWADLIRERAEDLARLLTLEQGKPLAEAR-GEVDYAASFLEWFAEEARRIYGRTIPSP 105
Query: 61 RA-LQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAH 119
+ +++P+GVV I PWNFP M K++PALAAGCT+++KPAE+TPL AL A
Sbjct: 106 APGKRILVIKQPVGVVAAITPWNFPAAMITRKIAPALAAGCTVVLKPAEETPLSALALAE 165
Query: 120 LAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVS 179
LA+ AG+P GVLNVV G G A+ + + K+SFTGST VG+ +M AA +K VS
Sbjct: 166 LAEEAGLPAGVLNVVTGSPAEIGEALCASPRVRKISFTGSTAVGKLLMAQAA-DTVKRVS 224
Query: 180 LELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKA 239
LELGG +P ++FDD D++ A D A+ N G+ CV ++R+YV E IYDEF +KLVE+
Sbjct: 225 LELGGNAPFIVFDDADLDKAVDGAIASKFRNAGQTCVCANRIYVHESIYDEFVEKLVERV 284
Query: 240 KAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIGKKGYYIEPTIF 299
K VG+ D GP ++++ +++ + +E +GA +LTGGK +G GY+ EPT+
Sbjct: 285 KKLKVGNGLDEGTDMGPLINERAVEKVEALVEDAVAKGAKVLTGGKRLGLGGYFYEPTVL 344
Query: 300 TNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSI 359
T+VT+DMLI E FGPV ++ F T +E I AN+T YGLAA + T+DL A V+ ++
Sbjct: 345 TDVTDDMLIMNEETFGPVAPIIPFDTEDEVIARANDTPYGLAAYVFTRDLARAWRVAEAL 404
Query: 360 RAGIIWINCYFAFDSDCPYGGYKMSGFGRDCGLESLHNYLQVKSV 404
AG++ IN D++ P+GG K SG GR+ G E L YL+ K V
Sbjct: 405 EAGMVGINTGLISDAEAPFGGVKESGLGREGGKEGLEEYLETKYV 449
|
Succinate-semialdehyde dehydrogenase, mitochondrial (SSADH, GabD, EC=1.2.1.24) catalyzes the NAD+-dependent oxidation of succinate semialdehyde (SSA) to succinate. This group includes the human aldehyde dehydrogenase family 5 member A1 (ALDH5A1) which is a mitochondrial homotetramer that converts SSA to succinate in the last step of 4-aminobutyric acid (GABA) catabolism. This CD also includes the Arabidopsis SSADH gene product ALDH5F1. Mutations in this gene result in the accumulation of H2O2, suggesting a role in plant defense against the environmental stress of elevated reactive oxygen species. Length = 451 |
| >gnl|CDD|143428 cd07110, ALDH_F10_BADH, Arabidopsis betaine aldehyde dehydrogenase 1 and 2, ALDH family 10A8 and 10A9-like | Back alignment and domain information |
|---|
Score = 466 bits (1200), Expect = e-163
Identities = 193/409 (47%), Positives = 259/409 (63%), Gaps = 8/409 (1%)
Query: 4 FADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIH---GEVLKM- 59
A+ + E E LA LEA D GK A D+ A YYA A+++ + +
Sbjct: 50 IAEGVRERREELAELEARDNGKPLDEA-AWDVDDVAGCFEYYADLAEQLDAKAERAVPLP 108
Query: 60 SRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAH 119
S + REP+GVVG I PWNFP M KV+PALAAGCT+++KP+E T L L A
Sbjct: 109 SEDFKARVRREPVGVVGLITPWNFPLLMAAWKVAPALAAGCTVVLKPSELTSLTELELAE 168
Query: 120 LAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVS 179
+A AG+P GVLNVV G G AGA +A+H IDK+SFTGST G QVMQAAA ++KPVS
Sbjct: 169 IAAEAGLPPGVLNVVTGTGDEAGAPLAAHPGIDKISFTGSTATGSQVMQAAA-QDIKPVS 227
Query: 180 LELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKA 239
LELGGKSP+++FDD D+ A + A+ G +N G+IC A+SR+ V E I D F ++L A
Sbjct: 228 LELGGKSPIIVFDDADLEKAVEWAMFGCFWNNGQICSATSRLLVHESIADAFLERLATAA 287
Query: 240 KAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGK--PIGKKGYYIEPT 297
+A VGDP + VR GP V + Q++++LS+I GK EGA LL GG+ +KGY+I PT
Sbjct: 288 EAIRVGDPLEEGVRLGPLVSQAQYEKVLSFIARGKEEGARLLCGGRRPAHLEKGYFIAPT 347
Query: 298 IFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVSR 357
+F +V D I + EIFGPV+ + F T +EAI AN++ YGLAA ++++D + V+
Sbjct: 348 VFADVPTDSRIWREEIFGPVLCVRSFATEDEAIALANDSEYGLAAAVISRDAERCDRVAE 407
Query: 358 SIRAGIIWINCYFAFDSDCPYGGYKMSGFGRDCGLESLHNYLQVKSVVT 406
++ AGI+WINC P+GGYK SG GR+ G L NYL+VK +
Sbjct: 408 ALEAGIVWINCSQPCFPQAPWGGYKRSGIGRELGEWGLDNYLEVKQITR 456
|
Present in this CD are the Arabidopsis betaine aldehyde dehydrogenase (BADH) 1 (chloroplast) and 2 (mitochondria), also known as, aldehyde dehydrogenase family 10 member A8 and aldehyde dehydrogenase family 10 member A9, respectively, and are putative dehydration- and salt-inducible BADHs (EC 1.2.1.8) that catalyze the oxidation of betaine aldehyde to the compatible solute glycine betaine. Length = 456 |
| >gnl|CDD|183918 PRK13252, PRK13252, betaine aldehyde dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 465 bits (1199), Expect = e-162
Identities = 188/408 (46%), Positives = 255/408 (62%), Gaps = 6/408 (1%)
Query: 1 MLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMS 60
+ + D++ E + LA LE LD GK + DI A+ L YYAG A + GE + +
Sbjct: 72 LRRAVDILRERNDELAALETLDTGKPIQETSVVDIVTGADVLEYYAGLAPALEGEQIPLR 131
Query: 61 RALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHL 120
YT REP+GV I WN+P + K +PALAAG MI KP+E TPL AL A +
Sbjct: 132 GGSFVYTRREPLGVCAGIGAWNYPIQIACWKSAPALAAGNAMIFKPSEVTPLTALKLAEI 191
Query: 121 AKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSL 180
AG+PDGV NVV G G GA + H DI KVSFTG G++VM AAA S LK V++
Sbjct: 192 YTEAGLPDGVFNVVQGDGRV-GAWLTEHPDIAKVSFTGGVPTGKKVMAAAAAS-LKEVTM 249
Query: 181 ELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAK 240
ELGGKSPL++FDD D++ AAD+A+L ++ G++C +RV+VQ+ I FE +L+E+ +
Sbjct: 250 ELGGKSPLIVFDDADLDRAADIAMLANFYSSGQVCTNGTRVFVQKSIKAAFEARLLERVE 309
Query: 241 AWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPI----GKKGYYIEP 296
+GDP DPA GP V D++L YIE GK EGA LL GG+ + G ++ P
Sbjct: 310 RIRIGDPMDPATNFGPLVSFAHRDKVLGYIEKGKAEGARLLCGGERLTEGGFANGAFVAP 369
Query: 297 TIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVS 356
T+FT+ T+DM I + EIFGPVM+++ F +E I AN+T YGLAAG+ T DL+ A+ V
Sbjct: 370 TVFTDCTDDMTIVREEIFGPVMSVLTFDDEDEVIARANDTEYGLAAGVFTADLSRAHRVI 429
Query: 357 RSIRAGIIWINCYFAFDSDCPYGGYKMSGFGRDCGLESLHNYLQVKSV 404
+ AGI WIN + ++ P GGYK SG GR+ G+ +L +Y Q+KSV
Sbjct: 430 HQLEAGICWINTWGESPAEMPVGGYKQSGIGRENGIATLEHYTQIKSV 477
|
Length = 488 |
| >gnl|CDD|143427 cd07109, ALDH_AAS00426, Uncharacterized Saccharopolyspora spinosa aldehyde dehydrogenase (AAS00426)-like | Back alignment and domain information |
|---|
Score = 460 bits (1187), Expect = e-161
Identities = 190/410 (46%), Positives = 259/410 (63%), Gaps = 9/410 (2%)
Query: 1 MLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMS 60
+L+ A LI EHA+ LA LE+LD GK + A+ D+ AA YY GAADK+HGE + +
Sbjct: 48 LLRIARLIREHADELARLESLDTGKPLTQAR-ADVEAAARYFEYYGGAADKLHGETIPLG 106
Query: 61 RALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHL 120
YT+REP GV GHIIPWN+P + V+PALAAG ++VKPAE PL AL A L
Sbjct: 107 PGYFVYTVREPHGVTGHIIPWNYPLQITGRSVAPALAAGNAVVVKPAEDAPLTALRLAEL 166
Query: 121 AKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSL 180
A+ AG+P G LNVV G G AGAA+ +H +D +SFTGS + G VM+AAA N+ PV+L
Sbjct: 167 AEEAGLPAGALNVVTGLGAEAGAALVAHPGVDHISFTGSVETGIAVMRAAA-ENVVPVTL 225
Query: 181 ELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAK 240
ELGGKSP ++F D D+ A + + I+ N G+ C A SR+ V IYDE ++LVE+ +
Sbjct: 226 ELGGKSPQIVFADADLEAALPVVVNAIIQNAGQTCSAGSRLLVHRSIYDEVLERLVERFR 285
Query: 241 AWVVGDPF-DPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPI---GKKGYYIEP 296
A VG DP + GP + KQ DR+ ++ + GA ++ GG+ GY++ P
Sbjct: 286 ALRVGPGLEDPDL--GPLISAKQLDRVEGFVARARARGARIVAGGRIAEGAPAGGYFVAP 343
Query: 297 TIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVS 356
T+ +V D +A+ EIFGPV+A+M F EAI AN T YGL AG+ T+D + A V+
Sbjct: 344 TLLDDVPPDSRLAQEEIFGPVLAVMPFDDEAEAIALANGTDYGLVAGVWTRDGDRALRVA 403
Query: 357 RSIRAGIIWINCYFAFDS-DCPYGGYKMSGFGRDCGLESLHNYLQVKSVV 405
R +RAG +++N Y A + P+GG K SG GR+ GLE+L+NY Q K+V
Sbjct: 404 RRLRAGQVFVNNYGAGGGIELPFGGVKKSGHGREKGLEALYNYTQTKTVA 453
|
Uncharacterized aldehyde dehydrogenase of Saccharopolyspora spinosa (AAS00426) and other similar sequences, are present in this CD. Length = 454 |
| >gnl|CDD|143471 cd07559, ALDH_ACDHII_AcoD-like, Ralstonia eutrophus NAD+-dependent acetaldehyde dehydrogenase II and Staphylococcus aureus AldA1 (SACOL0154)-like | Back alignment and domain information |
|---|
Score = 454 bits (1171), Expect = e-158
Identities = 200/415 (48%), Positives = 259/415 (62%), Gaps = 15/415 (3%)
Query: 1 MLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMS 60
+ K AD IEE+ E+LAV E LD GK DIP A + RY+AG G + ++
Sbjct: 66 LNKIADRIEENLELLAVAETLDNGKPIRETLAADIPLAIDHFRYFAGVIRAQEGSLSEID 125
Query: 61 RALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHL 120
Y EP+GVVG IIPWNFP M K++PALAAG T+++KPA QTPL L L
Sbjct: 126 EDTLSYHFHEPLGVVGQIIPWNFPLLMAAWKLAPALAAGNTVVLKPASQTPLSILV---L 182
Query: 121 AKLAG--VPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPV 178
+L G +P GV+NVV GFG AG +ASH I K++FTGST VGR +MQ AA NL PV
Sbjct: 183 MELIGDLLPKGVVNVVTGFGSEAGKPLASHPRIAKLAFTGSTTVGRLIMQYAA-ENLIPV 241
Query: 179 SLELGGKSPLLIFDDV-----DVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEK 233
+LELGGKSP + FDD D + A+ LG FN+GE+C SR VQE IYDEF +
Sbjct: 242 TLELGGKSPNIFFDDAMDADDDFDDKAEEGQLGFAFNQGEVCTCPSRALVQESIYDEFIE 301
Query: 234 KLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGK----PIGK 289
+ VE+ +A VG+P DP G QV K Q ++ILSY++ GK EGA +LTGG+
Sbjct: 302 RAVERFEAIKVGNPLDPETMMGAQVSKDQLEKILSYVDIGKEEGAEVLTGGERLTLGGLD 361
Query: 290 KGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDL 349
KGY+ EPT+ DM I + EIFGPV+A++ FK EEAI AN+T YGL G+ T+D+
Sbjct: 362 KGYFYEPTLIKGGNNDMRIFQEEIFGPVLAVITFKDEEEAIAIANDTEYGLGGGVWTRDI 421
Query: 350 NVANTVSRSIRAGIIWINCYFAFDSDCPYGGYKMSGFGRDCGLESLHNYLQVKSV 404
N A V+R I+ G +W+NCY + + P+GGYK SG GR+ L +Y Q K++
Sbjct: 422 NRALRVARGIQTGRVWVNCYHQYPAHAPFGGYKKSGIGRETHKMMLDHYQQTKNI 476
|
Included in this CD is the NAD+-dependent, acetaldehyde dehydrogenase II (AcDHII, AcoD, EC=1.2.1.3) from Ralstonia (Alcaligenes) eutrophus H16 involved in the catabolism of acetoin and ethanol, and similar proteins, such as, the dimeric dihydrolipoamide dehydrogenase of the acetoin dehydrogenase enzyme system of Klebsiella pneumonia. Also included are sequences similar to the NAD+-dependent chloroacetaldehyde dehydrogenases (AldA and AldB) of Xanthobacter autotrophicus GJ10 which are involved in the degradation of 1,2-dichloroethane, as well as, the uncharacterized aldehyde dehydrogenase from Staphylococcus aureus (AldA1, locus SACOL0154) and other similar sequences. Length = 480 |
| >gnl|CDD|143409 cd07090, ALDH_F9_TMBADH, NAD+-dependent 4-trimethylaminobutyraldehyde dehydrogenase, ALDH family 9A1 | Back alignment and domain information |
|---|
Score = 449 bits (1156), Expect = e-156
Identities = 181/409 (44%), Positives = 257/409 (62%), Gaps = 8/409 (1%)
Query: 1 MLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMS 60
+ K ADL+ E + +A LE +D GK A++ DI +A+ L YYAG A + GE + +
Sbjct: 47 LRKAADLLRERNDEIARLETIDNGKPIEEARV-DIDSSADCLEYYAGLAPTLSGEHVPLP 105
Query: 61 RALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHL 120
YT REP+GV I WN+P + K +PALA G M+ KP+ TPL AL A +
Sbjct: 106 GGSFAYTRREPLGVCAGIGAWNYPIQIASWKSAPALACGNAMVYKPSPFTPLTALLLAEI 165
Query: 121 AKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSL 180
AG+PDGV NVV G G T G + H D+ KVSFTGS G++VM AAA +K V+L
Sbjct: 166 LTEAGLPDGVFNVVQGGGET-GQLLCEHPDVAKVSFTGSVPTGKKVMSAAA-KGIKHVTL 223
Query: 181 ELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAK 240
ELGGKSPL+IFDD D+ A + A++ ++G++C +RV+VQ I DEF ++LVE+ K
Sbjct: 224 ELGGKSPLIIFDDADLENAVNGAMMANFLSQGQVCSNGTRVFVQRSIKDEFTERLVERTK 283
Query: 241 AWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIG-----KKGYYIE 295
+GDP D + G + ++ +++L YIE K+EGA +L GG+ + + G+Y+
Sbjct: 284 KIRIGDPLDEDTQMGALISEEHLEKVLGYIESAKQEGAKVLCGGERVVPEDGLENGFYVS 343
Query: 296 PTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTV 355
P + T+ T+DM I + EIFGPVM+++ F T EE I+ AN+T YGLAAG+ T+DL A+ V
Sbjct: 344 PCVLTDCTDDMTIVREEIFGPVMSILPFDTEEEVIRRANDTTYGLAAGVFTRDLQRAHRV 403
Query: 356 SRSIRAGIIWINCYFAFDSDCPYGGYKMSGFGRDCGLESLHNYLQVKSV 404
++AG WIN Y + P+GGYK SGFGR+ G +L +Y Q+K+V
Sbjct: 404 IAQLQAGTCWINTYNISPVEVPFGGYKQSGFGRENGTAALEHYTQLKTV 452
|
NAD+-dependent, 4-trimethylaminobutyraldehyde dehydrogenase (TMABADH, EC=1.2.1.47), also known as aldehyde dehydrogenase family 9 member A1 (ALDH9A1) in humans, is a cytosolic tetramer which catalyzes the oxidation of gamma-aminobutyraldehyde involved in 4-aminobutyric acid (GABA) biosynthesis and also oxidizes betaine aldehyde (gamma-trimethylaminobutyraldehyde) which is involved in carnitine biosynthesis. Length = 457 |
| >gnl|CDD|143458 cd07140, ALDH_F1L_FTFDH, 10-formyltetrahydrofolate dehydrogenase, ALDH family 1L | Back alignment and domain information |
|---|
Score = 449 bits (1156), Expect = e-156
Identities = 190/410 (46%), Positives = 275/410 (67%), Gaps = 6/410 (1%)
Query: 1 MLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMS 60
M + ADL+EEH E LA +E+LD+G +++ A + + T RY+AG DKI G+ + ++
Sbjct: 73 MYRLADLMEEHQEELATIESLDSGAVYTLALKTHVGMSIQTFRYFAGWCDKIQGKTIPIN 132
Query: 61 RALQG----YTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALY 116
+A T REPIGV G +IPWN+P M K++ LAAG T+++KPA+ TPL AL
Sbjct: 133 QARPNRNLTLTKREPIGVCGIVIPWNYPLMMLAWKMAACLAAGNTVVLKPAQVTPLTALK 192
Query: 117 FAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLK 176
FA L AG P GV+N++PG G G ++ H D+ K+ FTGST +G+ +M++ A SNLK
Sbjct: 193 FAELTVKAGFPKGVINILPGSGSLVGQRLSDHPDVRKLGFTGSTPIGKHIMKSCAVSNLK 252
Query: 177 PVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLV 236
VSLELGGKSPL+IF D D++ A M + + FNKGE C+A+ R++V+E I+DEF +++V
Sbjct: 253 KVSLELGGKSPLIIFADCDMDKAVRMGMSSVFFNKGENCIAAGRLFVEESIHDEFVRRVV 312
Query: 237 EKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIGKKGYYIEP 296
E+ K +GDP D + GPQ K D+++ Y E G +EGATL+ GGK + + G++ EP
Sbjct: 313 EEVKKMKIGDPLDRSTDHGPQNHKAHLDKLVEYCERGVKEGATLVYGGKQVDRPGFFFEP 372
Query: 297 TIFTNVTEDMLIAKNEIFGPVMALMKFKT--VEEAIKSANNTRYGLAAGIMTKDLNVANT 354
T+FT+V + M IAK E FGP+M + KF V+ ++ AN+T YGLA+G+ TKD+N A
Sbjct: 373 TVFTDVEDHMFIAKEESFGPIMIISKFDDGDVDGVLQRANDTEYGLASGVFTKDINKALY 432
Query: 355 VSRSIRAGIIWINCYFAFDSDCPYGGYKMSGFGRDCGLESLHNYLQVKSV 404
VS + AG +++N Y D P+GG+K SGFG+D G E+L+ YL+ K+V
Sbjct: 433 VSDKLEAGTVFVNTYNKTDVAAPFGGFKQSGFGKDLGEEALNEYLKTKTV 482
|
10-formyltetrahydrofolate dehydrogenase (FTHFDH, EC=1.5.1.6), also known as aldehyde dehydrogenase family 1 member L1 (ALDH1L1) in humans, is a multi-domain homotetramer with an N-terminal formyl transferase domain and a C-terminal ALDH domain. FTHFDH catalyzes an NADP+-dependent dehydrogenase reaction resulting in the conversion of 10-formyltetrahydrofolate to tetrahydrofolate and CO2. The ALDH domain is also capable of the oxidation of short chain aldehydes to their corresponding acids. Length = 486 |
| >gnl|CDD|143436 cd07118, ALDH_SNDH, Gluconobacter oxydans L-sorbosone dehydrogenase-like | Back alignment and domain information |
|---|
Score = 446 bits (1149), Expect = e-155
Identities = 192/406 (47%), Positives = 266/406 (65%), Gaps = 4/406 (0%)
Query: 1 MLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLK-M 59
+LK ADLI E LA++E L++GK S A G+I GAA+ RY A A +HG+ +
Sbjct: 49 LLKVADLIRARRERLALIETLESGKPISQA-RGEIEGAADLWRYAASLARTLHGDSYNNL 107
Query: 60 SRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAH 119
+ G LREPIGVVG I PWNFP + K+ ALAAGCT++VKP+E T L A
Sbjct: 108 GDDMLGLVLREPIGVVGIITPWNFPFLILSQKLPFALAAGCTVVVKPSEFTSGTTLMLAE 167
Query: 120 LAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVS 179
L AG+P GV+N+V G+G T G A+ H D+D VSFTGST VG+ + AAA NLK VS
Sbjct: 168 LLIEAGLPAGVVNIVTGYGATVGQAMTEHPDVDMVSFTGSTRVGKAIAAAAA-RNLKKVS 226
Query: 180 LELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKA 239
LELGGK+P ++F D D++ AAD + G+ FN GE C + SR+ V E I D F +V ++
Sbjct: 227 LELGGKNPQIVFADADLDAAADAVVFGVYFNAGECCNSGSRLLVHESIADAFVAAVVARS 286
Query: 240 KAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIGK-KGYYIEPTI 298
+ VGDP DP + G +++ Q +I Y++ G+ EGATLL GG+ + G + +PTI
Sbjct: 287 RKVRVGDPLDPETKVGAIINEAQLAKITDYVDAGRAEGATLLLGGERLASAAGLFYQPTI 346
Query: 299 FTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRS 358
FT+VT DM IA+ EIFGPV++++ F TV+EAI AN+T YGL+AG+ +KD++ A TV+R
Sbjct: 347 FTDVTPDMAIAREEIFGPVLSVLTFDTVDEAIALANDTVYGLSAGVWSKDIDTALTVARR 406
Query: 359 IRAGIIWINCYFAFDSDCPYGGYKMSGFGRDCGLESLHNYLQVKSV 404
IRAG +W+N + + P+GG+K SG GR+ G + Y ++K+V
Sbjct: 407 IRAGTVWVNTFLDGSPELPFGGFKQSGIGRELGRYGVEEYTELKTV 452
|
Included in this CD is the L-sorbosone dehydrogenase (SNDH) from Gluconobacter oxydans UV10. In G. oxydans, D-sorbitol is converted to 2-keto-L-gulonate (a precursor of L-ascorbic acid) in sequential oxidation steps catalyzed by a FAD-dependent, L-sorbose dehydrogenase and an NAD(P)+-dependent, L-sorbosone dehydrogenase. Length = 454 |
| >gnl|CDD|143456 cd07138, ALDH_CddD_SSP0762, Rhodococcus ruber 6-oxolauric acid dehydrogenase-like | Back alignment and domain information |
|---|
Score = 440 bits (1133), Expect = e-153
Identities = 171/407 (42%), Positives = 240/407 (58%), Gaps = 11/407 (2%)
Query: 3 KFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMSRA 62
+ A+ E A+ LA L+ G + A+ + LR A A +
Sbjct: 66 RIAEAYEARADELAQAITLEMGAPITLARAAQVGLGIGHLRAAADALKDF-----EFEER 120
Query: 63 LQGYTL-REPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLA 121
+ REPIGV G I PWN+P +KV+PALAAGCT+++KP+E PL A+ A +
Sbjct: 121 RGNSLVVREPIGVCGLITPWNWPLNQIVLKVAPALAAGCTVVLKPSEVAPLSAIILAEIL 180
Query: 122 KLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLE 181
AG+P GV N+V G GP G A+++H D+D VSFTGST G++V +AAA + +K V+LE
Sbjct: 181 DEAGLPAGVFNLVNGDGPVVGEALSAHPDVDMVSFTGSTRAGKRVAEAAADT-VKRVALE 239
Query: 182 LGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKA 241
LGGKS +I DD D+ A + N G+ C A +R+ V Y E E+ A+A
Sbjct: 240 LGGKSANIILDDADLEKAVPRGVAACFANSGQSCNAPTRMLVPRSRYAEAEEIAAAAAEA 299
Query: 242 WVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGG--KPIG-KKGYYIEPTI 298
+VVGDP DPA GP QFDR+ YI+ G EGA L+ GG +P G ++GY+++PT+
Sbjct: 300 YVVGDPRDPATTLGPLASAAQFDRVQGYIQKGIEEGARLVAGGPGRPEGLERGYFVKPTV 359
Query: 299 FTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRS 358
F +VT DM IA+ EIFGPV++++ + +EAI AN+T YGLA + + D A V+R
Sbjct: 360 FADVTPDMTIAREEIFGPVLSIIPYDDEDEAIAIANDTPYGLAGYVWSADPERARAVARR 419
Query: 359 IRAGIIWINCYFAFDSDCPYGGYKMSGFGRDCGLESLHNYLQVKSVV 405
+RAG + IN AF+ P+GGYK SG GR+ G L +L+VKS+
Sbjct: 420 LRAGQVHIN-GAAFNPGAPFGGYKQSGNGREWGRYGLEEFLEVKSIQ 465
|
The 6-oxolauric acid dehydrogenase (CddD) from Rhodococcus ruber SC1 which converts 6-oxolauric acid to dodecanedioic acid, and the aldehyde dehydrogenase (locus SSP0762) from Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 and other similar sequences, are included in this CD. Length = 466 |
| >gnl|CDD|143411 cd07092, ALDH_ABALDH-YdcW, Escherichia coli NAD+-dependent gamma-aminobutyraldehyde dehydrogenase YdcW-like | Back alignment and domain information |
|---|
Score = 434 bits (1117), Expect = e-150
Identities = 170/409 (41%), Positives = 244/409 (59%), Gaps = 8/409 (1%)
Query: 1 MLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMS 60
+LK AD IEE+AE LA LE+ + GK + ++PGA + R++AGAA + G
Sbjct: 47 LLKLADAIEENAEELAALESRNTGKPLHLVRDDELPGAVDNFRFFAGAARTLEGPA--AG 104
Query: 61 RALQGYT---LREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYF 117
L G+T REPIGVV I PWN+P M K++PALAAG T+++KP+E TPL L
Sbjct: 105 EYLPGHTSMIRREPIGVVAQIAPWNYPLMMAAWKIAPALAAGNTVVLKPSETTPLTTLLL 164
Query: 118 AHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKP 177
A LA +P GV+NVV G G +AG A+ +H + VS TGS G++V +AAA LK
Sbjct: 165 AELAA-EVLPPGVVNVVCGGGASAGDALVAHPRVRMVSLTGSVRTGKKVARAAA-DTLKR 222
Query: 178 VSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVE 237
V LELGGK+P+++FDD D++ A +N G+ C A+ RVYV E +YDEF LVE
Sbjct: 223 VHLELGGKAPVIVFDDADLDAAVAGIATAGYYNAGQDCTAACRVYVHESVYDEFVAALVE 282
Query: 238 KAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIGKKGYYIEPT 297
A VGDP D GP Q +R+ ++E A +LTGG+ GY+ EPT
Sbjct: 283 AVSAIRVGDPDDEDTEMGPLNSAAQRERVAGFVE-RAPAHARVLTGGRRAEGPGYFYEPT 341
Query: 298 IFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVSR 357
+ V +D I + EIFGPV+ + F +EAI+ AN+ YGLA+ + T+D+ A +S
Sbjct: 342 VVAGVAQDDEIVQEEIFGPVVTVQPFDDEDEAIELANDVEYGLASSVWTRDVGRAMRLSA 401
Query: 358 SIRAGIIWINCYFAFDSDCPYGGYKMSGFGRDCGLESLHNYLQVKSVVT 406
+ G +W+N + ++ P+GG+K SG+G+D + +L +Y ++K V+
Sbjct: 402 RLDFGTVWVNTHIPLAAEMPHGGFKQSGYGKDLSIYALEDYTRIKHVMV 450
|
NAD+-dependent, tetrameric, gamma-aminobutyraldehyde dehydrogenase (ABALDH), YdcW of Escherichia coli K12, catalyzes the oxidation of gamma-aminobutyraldehyde to gamma-aminobutyric acid. ABALDH can also oxidize n-alkyl medium-chain aldehydes, but with a lower catalytic efficiency. Length = 450 |
| >gnl|CDD|215260 PLN02467, PLN02467, betaine aldehyde dehydrogenase | Back alignment and domain information |
|---|
Score = 432 bits (1113), Expect = e-149
Identities = 193/416 (46%), Positives = 258/416 (62%), Gaps = 10/416 (2%)
Query: 5 ADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEV-----LKM 59
A I E LA LE LD GK A D+ A YYA A+ + + L M
Sbjct: 82 AAKITERKSELAKLETLDCGKPLDEAA-WDMDDVAGCFEYYADLAEALDAKQKAPVSLPM 140
Query: 60 SRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAH 119
+GY L+EP+GVVG I PWN+P M KV+PALAAGCT ++KP+E + L A
Sbjct: 141 E-TFKGYVLKEPLGVVGLITPWNYPLLMATWKVAPALAAGCTAVLKPSELASVTCLELAD 199
Query: 120 LAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVS 179
+ + G+P GVLNVV G G AGA +ASH +DK++FTGST GR++M AAA +KPVS
Sbjct: 200 ICREVGLPPGVLNVVTGLGTEAGAPLASHPGVDKIAFTGSTATGRKIMTAAA-QMVKPVS 258
Query: 180 LELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKA 239
LELGGKSP+++FDDVD++ A + A+ G + G+IC A+SR+ V E I EF +KLV+ A
Sbjct: 259 LELGGKSPIIVFDDVDLDKAVEWAMFGCFWTNGQICSATSRLLVHERIASEFLEKLVKWA 318
Query: 240 KAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGK--PIGKKGYYIEPT 297
K + DP + R GP V + Q++++L +I K EGAT+L GGK KKG++IEPT
Sbjct: 319 KNIKISDPLEEGCRLGPVVSEGQYEKVLKFISTAKSEGATILCGGKRPEHLKKGFFIEPT 378
Query: 298 IFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVSR 357
I T+VT M I + E+FGPV+ + F T +EAI+ AN++ YGLA +++ DL VS
Sbjct: 379 IITDVTTSMQIWREEVFGPVLCVKTFSTEDEAIELANDSHYGLAGAVISNDLERCERVSE 438
Query: 358 SIRAGIIWINCYFAFDSDCPYGGYKMSGFGRDCGLESLHNYLQVKSVVTPIFNSPW 413
+ +AGI+WINC P+GG K SGFGR+ G L NYL VK V I + PW
Sbjct: 439 AFQAGIVWINCSQPCFCQAPWGGIKRSGFGRELGEWGLENYLSVKQVTKYISDEPW 494
|
Length = 503 |
| >gnl|CDD|143435 cd07117, ALDH_StaphAldA1, Uncharacterized Staphylococcus aureus AldA1 (SACOL0154) aldehyde dehydrogenase-like | Back alignment and domain information |
|---|
Score = 428 bits (1103), Expect = e-148
Identities = 193/408 (47%), Positives = 265/408 (64%), Gaps = 6/408 (1%)
Query: 1 MLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMS 60
+ K AD+I+E+ E+LA++E LD GK + DIP AA+ RY+AG G +
Sbjct: 66 LNKIADIIDENKELLAMVETLDNGKPIRETRAVDIPLAADHFRYFAGVIRAEEGSANMID 125
Query: 61 RALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHL 120
LREPIGVVG IIPWNFP M K++PALAAG T+++KP+ T L L A +
Sbjct: 126 EDTLSIVLREPIGVVGQIIPWNFPFLMAAWKLAPALAAGNTVVIKPSSTTSLSLLELAKI 185
Query: 121 AKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSL 180
+ +P GV+N+V G G +G + +H +DK++FTGST+VGR V AAA L P +L
Sbjct: 186 IQDV-LPKGVVNIVTGKGSKSGEYLLNHPGLDKLAFTGSTEVGRDVAIAAA-KKLIPATL 243
Query: 181 ELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAK 240
ELGGKS +IFDD + + A + A LGILFN+G++C A SR++VQEGIYDEF KL EK +
Sbjct: 244 ELGGKSANIIFDDANWDKALEGAQLGILFNQGQVCCAGSRIFVQEGIYDEFVAKLKEKFE 303
Query: 241 AWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIGK----KGYYIEP 296
VG+P DP + G QV+K Q D+ILSY++ K EGA +LTGG + + KG++IEP
Sbjct: 304 NVKVGNPLDPDTQMGAQVNKDQLDKILSYVDIAKEEGAKILTGGHRLTENGLDKGFFIEP 363
Query: 297 TIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVS 356
T+ NVT DM +A+ EIFGPV ++KFKT +E I AN++ YGL G+ TKD+N A V+
Sbjct: 364 TLIVNVTNDMRVAQEEIFGPVATVIKFKTEDEVIDMANDSEYGLGGGVFTKDINRALRVA 423
Query: 357 RSIRAGIIWINCYFAFDSDCPYGGYKMSGFGRDCGLESLHNYLQVKSV 404
R++ G +W+N Y + P+GGYK SG GR+ L Y Q+K++
Sbjct: 424 RAVETGRVWVNTYNQIPAGAPFGGYKKSGIGRETHKSMLDAYTQMKNI 471
|
Uncharacterized aldehyde dehydrogenase from Staphylococcus aureus (AldA1, locus SACOL0154) and other similar sequences are present in this CD. Length = 475 |
| >gnl|CDD|237391 PRK13473, PRK13473, gamma-aminobutyraldehyde dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 427 bits (1100), Expect = e-147
Identities = 165/411 (40%), Positives = 240/411 (58%), Gaps = 14/411 (3%)
Query: 1 MLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMS 60
+LK AD IEE+A+ A LE+L+ GK A +IP + R++AGAA + G
Sbjct: 67 LLKLADAIEENADEFARLESLNCGKPLHLALNDEIPAIVDVFRFFAGAARCLEG-----K 121
Query: 61 RA---LQGYT---LREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIA 114
A L+G+T R+P+GVV I PWN+P M K++PALAAG T+++KP+E TPL A
Sbjct: 122 AAGEYLEGHTSMIRRDPVGVVASIAPWNYPLMMAAWKLAPALAAGNTVVLKPSEITPLTA 181
Query: 115 LYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSN 174
L A LA +P GVLNVV G G T G A+ H + VS TGS G+ V+ AAA +
Sbjct: 182 LKLAELAADI-LPPGVLNVVTGRGATVGDALVGHPKVRMVSLTGSIATGKHVLSAAA-DS 239
Query: 175 LKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKK 234
+K LELGGK+P+++FDD D++ + +N G+ C A+ R+Y Q GIYD+ K
Sbjct: 240 VKRTHLELGGKAPVIVFDDADLDAVVEGIRTFGYYNAGQDCTAACRIYAQRGIYDDLVAK 299
Query: 235 LVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREG-ATLLTGGKPIGKKGYY 293
L VGDP D GP + DR+ ++E K G ++TGG+ KGYY
Sbjct: 300 LAAAVATLKVGDPDDEDTELGPLISAAHRDRVAGFVERAKALGHIRVVTGGEAPDGKGYY 359
Query: 294 IEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVAN 353
EPT+ +D I + E+FGPV+++ F ++A++ AN++ YGLA+ + T+D+ A+
Sbjct: 360 YEPTLLAGARQDDEIVQREVFGPVVSVTPFDDEDQAVRWANDSDYGLASSVWTRDVGRAH 419
Query: 354 TVSRSIRAGIIWINCYFAFDSDCPYGGYKMSGFGRDCGLESLHNYLQVKSV 404
VS ++ G W+N +F S+ P+GG K SG+G+D L L +Y V+ V
Sbjct: 420 RVSARLQYGCTWVNTHFMLVSEMPHGGQKQSGYGKDMSLYGLEDYTVVRHV 470
|
Length = 475 |
| >gnl|CDD|200131 TIGR01804, BADH, glycine betaine aldehyde dehydrogenase | Back alignment and domain information |
|---|
Score = 426 bits (1096), Expect = e-147
Identities = 180/406 (44%), Positives = 256/406 (63%), Gaps = 5/406 (1%)
Query: 1 MLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMS 60
+ + ADLI E E LA LE LD GK + D+ A+ ++AG A ++GE++ +
Sbjct: 63 LRRAADLIRERNEELAKLETLDTGKTLQETIVADMDSGADVFEFFAGLAPALNGEIIPLG 122
Query: 61 RALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHL 120
YT+REP+GV I WN+P + K++PALAAG M+ KP+E TPL AL A +
Sbjct: 123 GPSFAYTIREPLGVCVGIGAWNYPLQIASWKIAPALAAGNAMVFKPSENTPLTALKVAEI 182
Query: 121 AKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSL 180
+ AG+P GV NVV G G G + +H D+ KVSFTG G+++M AAA +LK V++
Sbjct: 183 MEEAGLPKGVFNVVQGDGAEVGPLLVNHPDVAKVSFTGGVPTGKKIMAAAA-GHLKHVTM 241
Query: 181 ELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAK 240
ELGGKSPL++FDD D+ +A D A+LG F+ G++C +RV+V + I + F +LVE+ +
Sbjct: 242 ELGGKSPLIVFDDADLESAVDGAMLGNFFSAGQVCSNGTRVFVHKKIKERFLARLVERTE 301
Query: 241 AWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGK----PIGKKGYYIEP 296
+GDPFD A GP + D++LSYIE GK EGATL TGG + G+++EP
Sbjct: 302 RIKLGDPFDEATEMGPLISAAHRDKVLSYIEKGKAEGATLATGGGRPENVGLQNGFFVEP 361
Query: 297 TIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVS 356
T+F + T+DM I + EIFGPVM ++ F +E I AN+T YGLA G+ T DL A+ V+
Sbjct: 362 TVFADCTDDMTIVREEIFGPVMTVLTFSDEDEVIARANDTEYGLAGGVFTADLGRAHRVA 421
Query: 357 RSIRAGIIWINCYFAFDSDCPYGGYKMSGFGRDCGLESLHNYLQVK 402
+ AG +WIN Y + ++ P+GGYK SG GR+ G +L +Y +VK
Sbjct: 422 DQLEAGTVWINTYNLYPAEAPFGGYKQSGIGRENGKAALAHYTEVK 467
|
Under osmotic stress, betaine aldehyde dehydrogenase oxidizes glycine betaine aldehyde into the osmoprotectant glycine betaine, via the second of two oxidation steps from exogenously supplied choline or betaine aldehyde. This choline-glycine betaine synthesis pathway can be found in gram-positive and gram-negative bacteria. In Escherichia coli, betaine aldehyde dehydrogenase (betB) is osmotically co-induced with choline dehydrogenase (betA) in the presence of choline. These dehydrogenases are located in a betaine gene cluster with the upstream choline transporter (betT) and transcriptional regulator (betI). Similar to E.coli, betaine synthesis in Staphylococcus xylosus is also influenced by osmotic stress and the presence of choline with genes localized in a functionally equivalent gene cluster. Organization of the betaine gene cluster in Sinorhizobium meliloti and Bacillus subtilis differs from that of E.coli by the absence of upstream choline transporter and transcriptional regulator homologues. Additionally, B.subtilis co-expresses a type II alcohol dehydrogenase with betaine aldehyde dehydrogenase instead of choline dehydrogenase as in E.coli, St.xylosus, and Si.meliloti. Betaine aldehyde dehydrogenase is a member of the aldehyde dehydrogenase family (pfam00171) [Cellular processes, Adaptations to atypical conditions]. Length = 467 |
| >gnl|CDD|143408 cd07089, ALDH_CddD-AldA-like, Rhodococcus ruber 6-oxolauric acid dehydrogenase-like and related proteins | Back alignment and domain information |
|---|
Score = 423 bits (1090), Expect = e-146
Identities = 167/412 (40%), Positives = 236/412 (57%), Gaps = 8/412 (1%)
Query: 1 MLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEV---L 57
+ + + +E E L L + G A+ + G LRY+A AD E +
Sbjct: 48 LRQLHEALEARKEELRALLVAEVGAPVMTARAMQVDGPIGHLRYFADLADSFPWEFDLPV 107
Query: 58 KMSRALQGYTL--REPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIAL 115
R G + REP+GVV I PWNFP + K++PALAAG T+++KPA TPL AL
Sbjct: 108 PALRGGPGRRVVRREPVGVVAAITPWNFPFFLNLAKLAPALAAGNTVVLKPAPDTPLSAL 167
Query: 116 YFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNL 175
+ +P GV+NVV G G A+ + +D VSFTGST VGR++M AA + L
Sbjct: 168 LLGEIIAETDLPAGVVNVVTGSDNAVGEALTTDPRVDMVSFTGSTAVGRRIMAQAA-ATL 226
Query: 176 KPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKL 235
K V LELGGKS ++ DD D+ AA A+ + N G+ C ++R+ V YDE + L
Sbjct: 227 KRVLLELGGKSANIVLDDADLAAAAPAAVGVCMHNAGQGCALTTRLLVPRSRYDEVVEAL 286
Query: 236 VEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGK-PIG-KKGYY 293
+A VGDP DP GP + Q DR+ YI G+ EGA L+TGG P G KG+Y
Sbjct: 287 AAAFEALPVGDPADPGTVMGPLISAAQRDRVEGYIARGRDEGARLVTGGGRPAGLDKGFY 346
Query: 294 IEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVAN 353
+EPT+F +V DM IA+ EIFGPV+ ++ + +EA++ AN++ YGL+ G+ + D++ A
Sbjct: 347 VEPTLFADVDNDMRIAQEEIFGPVLVVIPYDDDDEAVRIANDSDYGLSGGVWSADVDRAY 406
Query: 354 TVSRSIRAGIIWINCYFAFDSDCPYGGYKMSGFGRDCGLESLHNYLQVKSVV 405
V+R IR G + IN + D P+GGYK SG GR+ G+E L +L+ KS+
Sbjct: 407 RVARRIRTGSVGINGGGGYGPDAPFGGYKQSGLGRENGIEGLEEFLETKSIA 458
|
The 6-oxolauric acid dehydrogenase (CddD) from Rhodococcus ruber SC1 which converts 6-oxolauric acid to dodecanedioic acid; and the aldehyde dehydrogenase (locus SSP0762) from Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 and also, the Mycobacterium tuberculosis H37Rv ALDH AldA (locus Rv0768) sequence; and other similar sequences, are included in this CD. Length = 459 |
| >gnl|CDD|143457 cd07139, ALDH_AldA-Rv0768, Mycobacterium tuberculosis aldehyde dehydrogenase AldA-like | Back alignment and domain information |
|---|
Score = 422 bits (1087), Expect = e-146
Identities = 166/406 (40%), Positives = 237/406 (58%), Gaps = 6/406 (1%)
Query: 3 KFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMSRA 62
+ AD +E A+ LA L + G SW++ PG A LRYYA A E +
Sbjct: 68 RLADALEARADELARLWTAENGMPISWSRRAQGPGPAALLRYYAALARDFPFEERRPGSG 127
Query: 63 L-QGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLA 121
REP+GVV I+PWN P + +K++PALAAGCT+++KP+ +TPL A A A
Sbjct: 128 GGHVLVRREPVGVVAAIVPWNAPLFLAALKIAPALAAGCTVVLKPSPETPLDAYLLAEAA 187
Query: 122 KLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLE 181
+ AG+P GV+NVVP G + H +DKVSFTGST GR++ L V+LE
Sbjct: 188 EEAGLPPGVVNVVPA-DREVGEYLVRHPGVDKVSFTGSTAAGRRIAAVCG-ERLARVTLE 245
Query: 182 LGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKA 241
LGGKS ++ DD D++ A + L N G++CVA +R+ V YDE + L A
Sbjct: 246 LGGKSAAIVLDDADLDAAVPGLVPASLMNNGQVCVALTRILVPRSRYDEVVEALAAAVAA 305
Query: 242 WVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGK-PIG-KKGYYIEPTIF 299
VGDP DPA + GP +Q +R+ YI G+ EGA L+TGG P G +G+++EPT+F
Sbjct: 306 LKVGDPLDPATQIGPLASARQRERVEGYIAKGRAEGARLVTGGGRPAGLDRGWFVEPTLF 365
Query: 300 TNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSI 359
+V DM IA+ EIFGPV++++ + ++A++ AN++ YGL+ + T D+ V+R I
Sbjct: 366 ADVDNDMRIAQEEIFGPVLSVIPYDDEDDAVRIANDSDYGLSGSVWTADVERGLAVARRI 425
Query: 360 RAGIIWINCYFAFDSDCPYGGYKMSGFGRDCGLESLHNYLQVKSVV 405
R G + +N F D P+GG+K SG GR+ G E L YL+ KS+
Sbjct: 426 RTGTVGVN-GFRLDFGAPFGGFKQSGIGREGGPEGLDAYLETKSIY 470
|
The Mycobacterium tuberculosis NAD+-dependent, aldehyde dehydrogenase PDB structure, 3B4W, and the Mycobacterium tuberculosis H37Rv aldehyde dehydrogenase AldA (locus Rv0768) sequence, as well as the Rhodococcus rhodochrous ALDH involved in haloalkane catabolism, and other similar sequences, are included in this CD. Length = 471 |
| >gnl|CDD|143415 cd07097, ALDH_KGSADH-YcbD, Bacillus subtilis NADP+-dependent alpha-ketoglutaric semialdehyde dehydrogenase ycbD-like | Back alignment and domain information |
|---|
Score = 399 bits (1027), Expect = e-136
Identities = 177/409 (43%), Positives = 248/409 (60%), Gaps = 7/409 (1%)
Query: 1 MLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMS 60
+ K D +E E LA L + GK A G++ A RYYAG A ++ GE L +
Sbjct: 65 LDKAGDELEARKEELARLLTREEGKTLPEA-RGEVTRAGQIFRYYAGEALRLSGETLPST 123
Query: 61 RA-LQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAH 119
R ++ T REP+GVVG I PWNFP + K++PALA G T++ KPAE TP A
Sbjct: 124 RPGVEVETTREPLGVVGLITPWNFPIAIPAWKIAPALAYGNTVVFKPAELTPASAWALVE 183
Query: 120 LAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVS 179
+ + AG+P GV N+V G G G A+ H D+D VSFTGST VGR++ AAA + V
Sbjct: 184 ILEEAGLPAGVFNLVMGSGSEVGQALVEHPDVDAVSFTGSTAVGRRI-AAAAAARGARVQ 242
Query: 180 LELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKA 239
LE+GGK+PL++ DD D++ A + A+ G F+ G+ C ASSR+ V EGI+D F + LVE+
Sbjct: 243 LEMGGKNPLVVLDDADLDLAVECAVQGAFFSTGQRCTASSRLIVTEGIHDRFVEALVERT 302
Query: 240 KAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPI--GKKGYYIEPT 297
KA VGD D V GP V ++Q ++ L YIE + EGA L+ GG+ + +GYY+ P
Sbjct: 303 KALKVGDALDEGVDIGPVVSERQLEKDLRYIEIARSEGAKLVYGGERLKRPDEGYYLAPA 362
Query: 298 IFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVSR 357
+F VT DM IA+ EIFGPV A+++ + +EA+ AN+T +GL+AGI+T L A R
Sbjct: 363 LFAGVTNDMRIAREEIFGPVAAVIRVRDYDEALAIANDTEFGLSAGIVTTSLKHATHFKR 422
Query: 358 SIRAGIIWINCYFA-FDSDCPYGGYKMSGFG-RDCGLESLHNYLQVKSV 404
+ AG++ +N A D P+GG K S +G R+ G +L Y +K+V
Sbjct: 423 RVEAGVVMVNLPTAGVDYHVPFGGRKGSSYGPREQGEAALEFYTTIKTV 471
|
Kinetic studies of the Bacillus subtilis ALDH-like ycbD protein, which is involved in d-glucarate/d-galactarate utilization, reveal that it is a NADP+-dependent, alpha-ketoglutaric semialdehyde dehydrogenase (KGSADH). KGSADHs (EC 1.2.1.26) catalyze the NAD(P)+-dependent conversion of KGSA to alpha-ketoglutarate. Interestingly, the NADP+-dependent, tetrameric, 2,5-dioxopentanoate dehydrogenase (EC=1.2.1.26), an enzyme involved in the catabolic pathway for D-arabinose in Sulfolobus solfataricus, also clusters in this group. This CD shows a distant phylogenetic relationship to the Azospirillum brasilense KGSADH-II (-III) group. Length = 473 |
| >gnl|CDD|143407 cd07088, ALDH_LactADH-AldA, Escherichia coli lactaldehyde dehydrogenase AldA-like | Back alignment and domain information |
|---|
Score = 395 bits (1018), Expect = e-135
Identities = 178/406 (43%), Positives = 254/406 (62%), Gaps = 6/406 (1%)
Query: 3 KFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMSRA 62
K ADLI E+A+ LA L + GK S A++ ++ A+ + Y A A +I GE++ R
Sbjct: 65 KLADLIRENADELAKLIVEEQGKTLSLARV-EVEFTADYIDYMAEWARRIEGEIIPSDRP 123
Query: 63 LQG-YTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLA 121
+ + + PIGVV I+PWNFP + K++PAL G T+++KP+E+TPL AL FA L
Sbjct: 124 NENIFIFKVPIGVVAGILPWNFPFFLIARKLAPALVTGNTIVIKPSEETPLNALEFAELV 183
Query: 122 KLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLE 181
AG+P GVLN+V G G G A+ +H + +S TGST+ G+++M+AAA N+ VSLE
Sbjct: 184 DEAGLPAGVLNIVTGRGSVVGDALVAHPKVGMISLTGSTEAGQKIMEAAA-ENITKVSLE 242
Query: 182 LGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKA 241
LGGK+P ++ D D++ A + + N G++C + RVYV E IYDEF +KLVEK KA
Sbjct: 243 LGGKAPAIVMKDADLDLAVKAIVDSRIINCGQVCTCAERVYVHEDIYDEFMEKLVEKMKA 302
Query: 242 WVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGK-PIGKKGYYIEPTIFT 300
VGDPFD A GP V++ D++ +E GATLLTGGK P G+KGY+ EPT+ T
Sbjct: 303 VKVGDPFDAATDMGPLVNEAALDKVEEMVERAVEAGATLLTGGKRPEGEKGYFYEPTVLT 362
Query: 301 NVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSIR 360
NV +DM I + EIFGPV+ ++KF +++EAI+ AN++ YGL + I T++LN A + +
Sbjct: 363 NVRQDMEIVQEEIFGPVLPVVKFSSLDEAIELANDSEYGLTSYIYTENLNTAMRATNELE 422
Query: 361 AGIIWINCYFAFDSDCPY-GGYKMSGFGRDCGLESLHNYLQVKSVV 405
G +IN F++ + G+K SG G G L YLQ K V
Sbjct: 423 FGETYINR-ENFEAMQGFHAGWKKSGLGGADGKHGLEEYLQTKVVY 467
|
Lactaldehyde dehydrogenase from Escherichia coli (AldA, LactADH, EC=1.2.1.22), an NAD(+)-dependent enzyme involved in the metabolism of L-fucose and L-rhamnose, and other similar sequences are present in this CD. Length = 468 |
| >gnl|CDD|143424 cd07106, ALDH_AldA-AAD23400, Streptomyces aureofaciens putative aldehyde dehydrogenase AldA (AAD23400)-like | Back alignment and domain information |
|---|
Score = 392 bits (1010), Expect = e-134
Identities = 172/404 (42%), Positives = 237/404 (58%), Gaps = 6/404 (1%)
Query: 1 MLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMS 60
+L AD IE +AE LA L L+ GK + A ++ GA LRY A EV++
Sbjct: 47 LLAIADAIEANAEELARLLTLEQGKPLAEA-QFEVGGAVAWLRYTASLDLPD--EVIEDD 103
Query: 61 RALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHL 120
+ R+P+GVV I+PWNFP + K++PAL AG T+++KP+ TPL L L
Sbjct: 104 DTRRVELRRKPLGVVAAIVPWNFPLLLAAWKIAPALLAGNTVVLKPSPFTPLCTLKLGEL 163
Query: 121 AKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSL 180
A+ +P GVLNVV G G G A+ SH DI K+SFTGST G++VM +AA LK V+L
Sbjct: 164 AQEV-LPPGVLNVVSG-GDELGPALTSHPDIRKISFTGSTATGKKVMASAA-KTLKRVTL 220
Query: 181 ELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAK 240
ELGG ++ DVD++ A G N G++C A R+YV E IYDEF + LV AK
Sbjct: 221 ELGGNDAAIVLPDVDIDAVAPKLFWGAFINSGQVCAAIKRLYVHESIYDEFCEALVALAK 280
Query: 241 AWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIGKKGYYIEPTIFT 300
A VVGD DP GP +K Q+D++ +E K +GA +L GG+P+ GY+I PTI
Sbjct: 281 AAVVGDGLDPGTTLGPVQNKMQYDKVKELVEDAKAKGAKVLAGGEPLDGPGYFIPPTIVD 340
Query: 301 NVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSIR 360
+ E I E FGPV+ ++K+ +E I AN++ YGL A + + DL A V+R +
Sbjct: 341 DPPEGSRIVDEEQFGPVLPVLKYSDEDEVIARANDSEYGLGASVWSSDLERAEAVARRLE 400
Query: 361 AGIIWINCYFAFDSDCPYGGYKMSGFGRDCGLESLHNYLQVKSV 404
AG +WIN + A D D P+GG+K SG G + G+E L Y Q + +
Sbjct: 401 AGTVWINTHGALDPDAPFGGHKQSGIGVEFGIEGLKEYTQTQVI 444
|
Putative aldehyde dehydrogenase, AldA, from Streptomyces aureofaciens (locus AAD23400) and other similar sequences are present in this CD. Length = 446 |
| >gnl|CDD|143425 cd07107, ALDH_PhdK-like, Nocardioides 2-carboxybenzaldehyde dehydrogenase, PhdK-like | Back alignment and domain information |
|---|
Score = 390 bits (1003), Expect = e-133
Identities = 184/411 (44%), Positives = 259/411 (63%), Gaps = 11/411 (2%)
Query: 1 MLK-FADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKM 59
ML+ A + EHAE LA+++ALD G S A +GD+ AA L Y+AG ++ GE + +
Sbjct: 46 MLRELATRLREHAEELALIDALDCGNPVS-AMLGDVMVAAALLDYFAGLVTELKGETIPV 104
Query: 60 SRALQGYTLREPIGVVGHIIPWNFPTTMFFM-KVSPALAAGCTMIVKPAEQTPLIALYFA 118
YTLREP GVV I+ +N P MF K++ LAAG T++VKP EQ PL AL A
Sbjct: 105 GGRNLHYTLREPYGVVARIVAFNHPL-MFAAAKIAAPLAAGNTVVVKPPEQAPLSALRLA 163
Query: 119 HLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPV 178
LA+ +P GV N++PG G TAGAA+ H D+ +++ GS GR +M+AAA +K V
Sbjct: 164 ELAR-EVLPPGVFNILPGDGATAGAALVRHPDVKRIALIGSVPTGRAIMRAAAEG-IKHV 221
Query: 179 SLELGGKSPLLIFDDVDVNTAADMALLGILFN-KGEICVASSRVYVQEGIYDEFEKKLVE 237
+LELGGK+ L++F D D AAD A+ G+ F G+ C ++SR++V E IYDE ++VE
Sbjct: 222 TLELGGKNALIVFPDADPEAAADAAVAGMNFTWCGQSCGSTSRLFVHESIYDEVLARVVE 281
Query: 238 KAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGK----PIGKKGYY 293
+ A VGDP DPA GP V ++Q+DR++ YI+ KREGA L+TGG P + G+Y
Sbjct: 282 RVAAIKVGDPTDPATTMGPLVSRQQYDRVMHYIDSAKREGARLVTGGGRPEGPALEGGFY 341
Query: 294 IEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVAN 353
+EPT+F +VT M IA+ EIFGPV+++++++ E + AN YGL A I T D++ A+
Sbjct: 342 VEPTVFADVTPGMRIAREEIFGPVLSVLRWRDEAEMVAQANGVEYGLTAAIWTNDISQAH 401
Query: 354 TVSRSIRAGIIWINCYFAFDSDCPYGGYKMSGFGRDCGLESLHNYLQVKSV 404
+R + AG +WIN P+GG K SG GR+ LE L +Y Q K+V
Sbjct: 402 RTARRVEAGYVWINGSSRHFLGAPFGGVKNSGIGREECLEELLSYTQEKNV 452
|
Nocardioides sp. strain KP72-carboxybenzaldehyde dehydrogenase (PhdK), an enzyme involved in phenanthrene degradation, and other similar sequences, are present in this CD. Length = 456 |
| >gnl|CDD|143429 cd07111, ALDH_F16, Aldehyde dehydrogenase family 16A1-like | Back alignment and domain information |
|---|
Score = 390 bits (1005), Expect = e-133
Identities = 177/395 (44%), Positives = 254/395 (64%), Gaps = 12/395 (3%)
Query: 5 ADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMSRALQ 64
A I++H + AVLE+LD GK ++ DIP A ++AG A + L
Sbjct: 91 ARHIQKHQRLFAVLESLDNGKPIRESRDCDIPLVARHFYHHAGWAQL-------LDTELA 143
Query: 65 GYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLA 124
G+ +P+GVVG I+PWNFP M K+ PALA G T+++KPAE TPL AL FA + A
Sbjct: 144 GW---KPVGVVGQIVPWNFPLLMLAWKICPALAMGNTVVLKPAEYTPLTALLFAEICAEA 200
Query: 125 GVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGG 184
G+P GVLN+V G + G+A+A+H +DKV+FTGST+VGR + +A A + K +SLELGG
Sbjct: 201 GLPPGVLNIVTG-NGSFGSALANHPGVDKVAFTGSTEVGRALRRATAGTG-KKLSLELGG 258
Query: 185 KSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVV 244
KSP ++FDD D+++A + + I FN+G++C A SR+ VQE + +E +KL E+ V
Sbjct: 259 KSPFIVFDDADLDSAVEGIVDAIWFNQGQVCCAGSRLLVQESVAEELIRKLKERMSHLRV 318
Query: 245 GDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIGKKGYYIEPTIFTNVTE 304
GDP D A+ G VD Q RI +E G+ EGA + G + KG + PT+FTNV
Sbjct: 319 GDPLDKAIDMGAIVDPAQLKRIRELVEEGRAEGADVFQPGADLPSKGPFYPPTLFTNVPP 378
Query: 305 DMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSIRAGII 364
IA+ EIFGPV+ ++ F+T +EA+ ANNT YGLAA + +++L++A V+ S++AG++
Sbjct: 379 ASRIAQEEIFGPVLVVLTFRTAKEAVALANNTPYGLAASVWSENLSLALEVALSLKAGVV 438
Query: 365 WINCYFAFDSDCPYGGYKMSGFGRDCGLESLHNYL 399
WIN + FD+ +GGY+ SGFGR+ G E L+ YL
Sbjct: 439 WINGHNLFDAAAGFGGYRESGFGREGGKEGLYEYL 473
|
Uncharacterized aldehyde dehydrogenase family 16 member A1 (ALDH16A1) and other related sequences are present in this CD. The active site cysteine and glutamate residues are not conserved in the human ALDH16A1 protein sequence. Length = 480 |
| >gnl|CDD|182108 PRK09847, PRK09847, gamma-glutamyl-gamma-aminobutyraldehyde dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 391 bits (1005), Expect = e-133
Identities = 180/405 (44%), Positives = 264/405 (65%), Gaps = 3/405 (0%)
Query: 1 MLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMS 60
+ K ADL+E HAE LA+LE LD GK + DIPGAA +R+YA A DK++GEV S
Sbjct: 87 LNKLADLMEAHAEELALLETLDTGKPIRHSLRDDIPGAARAIRWYAEAIDKVYGEVATTS 146
Query: 61 RALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHL 120
+REP+GV+ I+PWNFP + K+ PALAAG ++I+KP+E++PL A+ A L
Sbjct: 147 SHELAMIVREPVGVIAAIVPWNFPLLLTCWKLGPALAAGNSVILKPSEKSPLSAIRLAGL 206
Query: 121 AKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSL 180
AK AG+PDGVLNVV GFG AG A++ H DID ++FTGST G+Q+++ A SN+K V L
Sbjct: 207 AKEAGLPDGVLNVVTGFGHEAGQALSRHNDIDAIAFTGSTRTGKQLLKDAGDSNMKRVWL 266
Query: 181 ELGGKSPLLIFDDV-DVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKA 239
E GGKS ++F D D+ AA GI +N+G++C+A +R+ ++E I DEF L ++A
Sbjct: 267 EAGGKSANIVFADCPDLQQAASATAAGIFYNQGQVCIAGTRLLLEESIADEFLALLKQQA 326
Query: 240 KAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIGKKGYYIEPTIF 299
+ W G P DPA G +D D + S+I G+ +G LL G+ G I PTIF
Sbjct: 327 QNWQPGHPLDPATTMGTLIDCAHADSVHSFIREGESKG-QLLLDGRNAGLAA-AIGPTIF 384
Query: 300 TNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSI 359
+V + +++ EIFGPV+ + +F + E+A++ AN+++YGL A + T+DL+ A+ +SR +
Sbjct: 385 VDVDPNASLSREEIFGPVLVVTRFTSEEQALQLANDSQYGLGAAVWTRDLSRAHRMSRRL 444
Query: 360 RAGIIWINCYFAFDSDCPYGGYKMSGFGRDCGLESLHNYLQVKSV 404
+AG +++N Y D P+GGYK SG GRD L +L + ++K++
Sbjct: 445 KAGSVFVNNYNDGDMTVPFGGYKQSGNGRDKSLHALEKFTELKTI 489
|
Length = 494 |
| >gnl|CDD|143422 cd07104, ALDH_BenzADH-like, ALDH subfamily: NAD(P)+-dependent benzaldehyde dehydrogenase II, vanillin dehydrogenase, p-hydroxybenzaldehyde dehydrogenase and related proteins | Back alignment and domain information |
|---|
Score = 386 bits (993), Expect = e-132
Identities = 162/410 (39%), Positives = 236/410 (57%), Gaps = 18/410 (4%)
Query: 1 MLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVL--- 57
+ K A+++EE + +A ++G A ++ A LR AG + GE+L
Sbjct: 28 LRKAAEILEERRDEIADWLIRESGSTRPKA-AFEVGAAIAILREAAGLPRRPEGEILPSD 86
Query: 58 ---KMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPL-I 113
K S R P+GVVG I P+NFP + V+PALA G +++KP +TP+
Sbjct: 87 VPGKESMVR-----RVPLGVVGVISPFNFPLILAMRSVAPALALGNAVVLKPDSRTPVTG 141
Query: 114 ALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATS 173
L A + + AG+P GVLNVVPG G G A+ H + +SFTGST VGR + + A
Sbjct: 142 GLLIAEIFEEAGLPKGVLNVVPGGGSEIGDALVEHPRVRMISFTGSTAVGRHIGELAGR- 200
Query: 174 NLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEK 233
+LK V+LELGG +PL++ DD D++ A A G ++G+IC+A+ R+ V E +YDEF +
Sbjct: 201 HLKKVALELGGNNPLIVLDDADLDLAVSAAAFGAFLHQGQICMAAGRILVHESVYDEFVE 260
Query: 234 KLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIGKKGYY 293
KLV KAKA VGDP DP GP ++++Q DR+ + +E GA LLTGG +G +
Sbjct: 261 KLVAKAKALPVGDPRDPDTVIGPLINERQVDRVHAIVEDAVAAGARLLTGGTY---EGLF 317
Query: 294 IEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVAN 353
+PT+ ++VT DM I + EIFGPV ++ F EEA++ AN+T YGL+A + T+DL A
Sbjct: 318 YQPTVLSDVTPDMPIFREEIFGPVAPVIPFDDDEEAVELANDTEYGLSAAVFTRDLERAM 377
Query: 354 TVSRSIRAGIIWINCYFAFD-SDCPYGGYKMSGFGRDCGLESLHNYLQVK 402
+ + G++ IN D P+GG K SG GR G SL + + +
Sbjct: 378 AFAERLETGMVHINDQTVNDEPHVPFGGVKASGGGRFGGPASLEEFTEWQ 427
|
ALDH subfamily which includes the NAD(P)+-dependent, benzaldehyde dehydrogenase II (XylC, BenzADH, EC=1.2.1.28) involved in the oxidation of benzyl alcohol to benzoate; p-hydroxybenzaldehyde dehydrogenase (PchA, HBenzADH) which catalyzes the oxidation of p-hydroxybenzaldehyde to p-hydroxybenzoic acid; vanillin dehydrogenase (Vdh, VaniDH) involved in the metabolism of ferulic acid as seen in Pseudomonas putida KT2440; and other related sequences. Length = 431 |
| >gnl|CDD|143426 cd07108, ALDH_MGR_2402, Magnetospirillum NAD(P)+-dependent aldehyde dehydrogenase MSR-1-like | Back alignment and domain information |
|---|
Score = 379 bits (974), Expect = e-129
Identities = 169/412 (41%), Positives = 246/412 (59%), Gaps = 9/412 (2%)
Query: 1 MLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMS 60
+ + AD +E +E LA L AL+ G + A+ RY+ G A ++ GE L
Sbjct: 47 LARIADALEARSEELARLLALETGNALRTQARPEAAVLADLFRYFGGLAGELKGETLPFG 106
Query: 61 RALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHL 120
+ YT+REP+GVVG I+PWN P + +K++PAL AG T+++K AE PL L A +
Sbjct: 107 PDVLTYTVREPLGVVGAILPWNAPLMLAALKIAPALVAGNTVVLKAAEDAPLAVLLLAEI 166
Query: 121 AKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSL 180
+P GVLNV+ G+G GAA+ H D+DKV+FTGST+VG+ + +AAA L PVSL
Sbjct: 167 LA-QVLPAGVLNVITGYGEECGAALVDHPDVDKVTFTGSTEVGKIIYRAAA-DRLIPVSL 224
Query: 181 ELGGKSPLLIFDDVDVNTAADMALLGILFNK-GEICVASSRVYVQEGIYDEFEKKLVEKA 239
ELGGKSP+++F D D++ A D A+ G+ F + G+ C A SR++V E IYD F +KLV K
Sbjct: 225 ELGGKSPMIVFPDADLDDAVDGAIAGMRFTRQGQSCTAGSRLFVHEDIYDAFLEKLVAKL 284
Query: 240 KAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKRE-GATLLTGGKP----IGKKGYYI 294
+GDP D A G + +KQF ++ YI+ G GAT+L GG G+++
Sbjct: 285 SKLKIGDPLDEATDIGAIISEKQFAKVCGYIDLGLSTSGATVLRGGPLPGEGPLADGFFV 344
Query: 295 EPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANT 354
+PTIF+ V + +A+ EIFGPV+ + +K +E I AN++ YGLAA + T+DL A
Sbjct: 345 QPTIFSGVDNEWRLAREEIFGPVLCAIPWKDEDEVIAMANDSHYGLAAYVWTRDLGRALR 404
Query: 355 VSRSIRAGIIWINCYFAFDSDCPYGGYKMSGFGRDCGLES-LHNYLQVKSVV 405
+ ++ AG + +N YGG+K SG GR+ LE L ++ Q K+V
Sbjct: 405 AAHALEAGWVQVNQGGGQQPGQSYGGFKQSGLGREASLEGMLEHFTQKKTVN 456
|
NAD(P)+-dependent aldehyde dehydrogenase of Magnetospirillum gryphiswaldense MSR-1 (MGR_2402) , and other similar sequences, are present in this CD. Length = 457 |
| >gnl|CDD|131352 TIGR02299, HpaE, 5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase | Back alignment and domain information |
|---|
Score = 379 bits (975), Expect = e-129
Identities = 178/416 (42%), Positives = 251/416 (60%), Gaps = 11/416 (2%)
Query: 1 MLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAG-AADKIHGEVLKM 59
+ K ADLIE+HA+ +AVLE LD G+ + + AA R++A + + G +
Sbjct: 66 LHKIADLIEQHADEIAVLECLDCGQPLRQTRQQ-VIRAAENFRFFADKCEEAMDGRTYPV 124
Query: 60 SRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAH 119
L YT+R P+G VG I PWN P + K++PALA G T+++KPAE +PL A A
Sbjct: 125 DTHLN-YTVRVPVGPVGLITPWNAPFMLSTWKIAPALAFGNTVVLKPAEWSPLTAARLAE 183
Query: 120 LAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVS 179
+AK AG+PDGV N+V GFG AG A+ +H D+ VSFTG T G +M+ A + LK S
Sbjct: 184 IAKEAGLPDGVFNLVHGFGEEAGKALVAHPDVKAVSFTGETATGSIIMRNGADT-LKRFS 242
Query: 180 LELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKA 239
+ELGGKSP+++FDD D+ A D + I GE C ASSR+ VQE I ++F +KLVE+
Sbjct: 243 MELGGKSPVIVFDDADLERALDAVVFMIFSFNGERCTASSRLLVQESIAEDFVEKLVERV 302
Query: 240 KAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGK----PIGKK---GY 292
+A VG P DP GP + + ++L Y+E ++EGAT+L GG+ G+ G
Sbjct: 303 RAIRVGHPLDPETEVGPLIHPEHLAKVLGYVEAAEKEGATILVGGERAPTFRGEDLGRGN 362
Query: 293 YIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVA 352
Y+ PT+FT M IA+ EIFGPV+ ++ FK EEAI+ AN+TRYGLA + T D+ A
Sbjct: 363 YVLPTVFTGADNHMRIAQEEIFGPVLTVIPFKDEEEAIEKANDTRYGLAGYVWTNDVGRA 422
Query: 353 NTVSRSIRAGIIWINCYFAFDSDCPYGGYKMSGFGRDCGLESLHNYLQVKSVVTPI 408
+ V+ ++ AG+IW+N P+GG K SG GR+ G S Y + K+V +
Sbjct: 423 HRVALALEAGMIWVNSQNVRHLPTPFGGVKASGIGREGGTYSFDFYTETKNVALAL 478
|
This model represents the dehydrogenase responsible for the conversion of 5-carboxymethyl-2-hydroxymuconate semialdehyde to 5-carboxymethyl-2-hydroxymuconate (a tricarboxylic acid). This is the step in the degradation of 4-hydroxyphenylacetic acid via homoprotocatechuate following the oxidative opening of the aromatic ring. Length = 488 |
| >gnl|CDD|143434 cd07116, ALDH_ACDHII-AcoD, Ralstonia eutrophus NAD+-dependent acetaldehyde dehydrogenase II-like | Back alignment and domain information |
|---|
Score = 379 bits (974), Expect = e-128
Identities = 184/417 (44%), Positives = 243/417 (58%), Gaps = 16/417 (3%)
Query: 1 MLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMS 60
+ K AD +E + E+LAV E D GK DIP A + RY+AG G + ++
Sbjct: 66 LNKIADRMEANLEMLAVAETWDNGKPVRETLAADIPLAIDHFRYFAGCIRAQEGSISEID 125
Query: 61 RALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHL 120
Y EP+GVVG IIPWNFP M K++PALAAG +++KPAEQTP L L
Sbjct: 126 ENTVAYHFHEPLGVVGQIIPWNFPLLMATWKLAPALAAGNCVVLKPAEQTPASILV---L 182
Query: 121 AKLAG--VPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPV 178
+L G +P GV+NVV GFG AG +AS I KV+FTG T GR +MQ A + N+ PV
Sbjct: 183 MELIGDLLPPGVVNVVNGFGLEAGKPLASSKRIAKVAFTGETTTGRLIMQYA-SENIIPV 241
Query: 179 SLELGGKSPLLIFDDVDVNTAA--DMALLGIL---FNKGEICVASSRVYVQEGIYDEFEK 233
+LELGGKSP + F DV A D AL G + N+GE+C SR +QE IYD F +
Sbjct: 242 TLELGGKSPNIFFADVMDADDAFFDKALEGFVMFALNQGEVCTCPSRALIQESIYDRFME 301
Query: 234 KLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGK----PIGK 289
+ +E+ KA G+P D G Q +Q ++ILSYI+ GK EGA +LTGG+
Sbjct: 302 RALERVKAIKQGNPLDTETMIGAQASLEQLEKILSYIDIGKEEGAEVLTGGERNELGGLL 361
Query: 290 KGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDL 349
G Y PT F M I + EIFGPV+A+ FK EEA++ AN+T YGL AG+ T+D
Sbjct: 362 GGGYYVPTTFKG-GNKMRIFQEEIFGPVLAVTTFKDEEEALEIANDTLYGLGAGVWTRDG 420
Query: 350 NVANTVSRSIRAGIIWINCYFAFDSDCPYGGYKMSGFGRDCGLESLHNYLQVKSVVT 406
N A + R I+AG +W NCY + + +GGYK SG GR+ L +Y Q K+++
Sbjct: 421 NTAYRMGRGIQAGRVWTNCYHLYPAHAAFGGYKQSGIGRENHKMMLDHYQQTKNLLV 477
|
Included in this CD is the NAD+-dependent, acetaldehyde dehydrogenase II (AcDHII, AcoD, EC=1.2.1.3) from Ralstonia (Alcaligenes) eutrophus H16 involved in the catabolism of acetoin and ethanol, and similar proteins, such as, the dimeric dihydrolipoamide dehydrogenase of the acetoin dehydrogenase enzyme system of Klebsiella pneumonia. Also included are sequences similar to the NAD+-dependent chloroacetaldehyde dehydrogenases (AldA and AldB) of Xanthobacter autotrophicus GJ10 which are involved in the degradation of 1,2-dichloroethane. These proteins apparently require RpoN factors for expression. Length = 479 |
| >gnl|CDD|143431 cd07113, ALDH_PADH_NahF, Escherichia coli NAD+-dependent phenylacetaldehyde dehydrogenase PadA-like | Back alignment and domain information |
|---|
Score = 369 bits (950), Expect = e-125
Identities = 162/410 (39%), Positives = 242/410 (59%), Gaps = 8/410 (1%)
Query: 1 MLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMS 60
+L+ ADLIE+H E LA LE L +GK ++ ++ +AN LRY+AG A KI+GE L S
Sbjct: 66 LLRLADLIEQHGEELAQLETLCSGKSIHLSRAFEVGQSANFLRYFAGWATKINGETLAPS 125
Query: 61 RAL------QGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIA 114
+T REP+GVV I+PWNF + K+ ALA GCT+++KP+E TPL
Sbjct: 126 IPSMQGERYTAFTRREPVGVVAGIVPWNFSVMIAVWKIGAALATGCTIVIKPSEFTPLTL 185
Query: 115 LYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSN 174
L A LAK AG+PDGVLNVV G G GA + SH D+ KVSFTGS G+++ A S+
Sbjct: 186 LRVAELAKEAGIPDGVLNVVNGKGAV-GAQLISHPDVAKVSFTGSVATGKKI-GRQAASD 243
Query: 175 LKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKK 234
L V+LELGGK+ D D++ + L ++G++C A R YV +DE K
Sbjct: 244 LTRVTLELGGKNAAAFLKDADIDWVVEGLLTAGFLHQGQVCAAPERFYVHRSKFDELVTK 303
Query: 235 LVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIGKKGYYI 294
L + ++ VG P D +V GP ++ FD++ SY++ + EG ++ GG+ + +GY++
Sbjct: 304 LKQALSSFQVGSPMDESVMFGPLANQPHFDKVCSYLDDARAEGDEIVRGGEALAGEGYFV 363
Query: 295 EPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANT 354
+PT+ + D + + E FGPV++ + ++ EE I+ N+T +GL A + T +L+ A
Sbjct: 364 QPTLVLARSADSRLMREETFGPVVSFVPYEDEEELIQLINDTPFGLTASVWTNNLSKALR 423
Query: 355 VSRSIRAGIIWINCYFAFDSDCPYGGYKMSGFGRDCGLESLHNYLQVKSV 404
I AG +W+N + D P+GG K SG GR+ G + +Y ++KSV
Sbjct: 424 YIPRIEAGTVWVNMHTFLDPAVPFGGMKQSGIGREFGSAFIDDYTELKSV 473
|
NAD+-dependent, homodimeric, phenylacetaldehyde dehydrogenase (PADH, EC=1.2.1.39) PadA of Escherichia coli involved in the catabolism of 2-phenylethylamine, and other related sequences, are present in this CD. Also included is the Pseudomonas fluorescens ST StyD PADH involved in styrene catabolism, the Sphingomonas sp. LB126 FldD protein involved in fluorene degradation, and the Novosphingobium aromaticivorans NahF salicylaldehyde dehydrogenase involved in the NAD+-dependent conversion of salicylaldehyde to salicylate. Length = 477 |
| >gnl|CDD|188167 TIGR01780, SSADH, succinate-semialdehyde dehydrogenase | Back alignment and domain information |
|---|
Score = 368 bits (946), Expect = e-125
Identities = 164/402 (40%), Positives = 246/402 (61%), Gaps = 4/402 (0%)
Query: 3 KFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMSRA 62
K+ +L+ E+ + LA L L+ GK AK G+I AA+ L ++A A +++G+ + ++
Sbjct: 49 KWYNLMMENKDDLARLITLENGKPLKEAK-GEILYAASFLEWFAEEAKRVYGDTIPSPQS 107
Query: 63 LQ-GYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLA 121
+ +++P+GV I PWNFP M K ALAAGCT++VKPAEQTPL AL A LA
Sbjct: 108 DKRLIVIKQPVGVCAAITPWNFPAAMITRKAGAALAAGCTVVVKPAEQTPLSALALARLA 167
Query: 122 KLAGVPDGVLNVVPG-FGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSL 180
+ AG+P GVLNV+ G G + + + K+SFTGST+VG+ +M+ +A S +K VS+
Sbjct: 168 EQAGIPKGVLNVITGSRAKEVGNVLTTSPLVRKISFTGSTNVGKILMKQSA-STVKKVSM 226
Query: 181 ELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAK 240
ELGG +P ++FDD D++ A + A+ N G+ CV ++R+YV +GIYDEF KKL E K
Sbjct: 227 ELGGNAPFIVFDDADLDQAVEGAMASKFRNAGQTCVCANRLYVHDGIYDEFAKKLAEAVK 286
Query: 241 AWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIGKKGYYIEPTIFT 300
VG+ D V QGP +++K +++ +I +GA ++TGGK G + EPT+ +
Sbjct: 287 KLKVGNGLDEGVTQGPLINEKAVEKVEKHIADAVEKGAKVVTGGKRHELGGNFFEPTVLS 346
Query: 301 NVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSIR 360
NVT DML++K E FGP+ + KF EE I AN+T GLAA ++DL+ V+ ++
Sbjct: 347 NVTADMLVSKEETFGPLAPVFKFDDEEEVIAIANDTEVGLAAYFFSRDLSRIWRVAEALE 406
Query: 361 AGIIWINCYFAFDSDCPYGGYKMSGFGRDCGLESLHNYLQVK 402
G++ IN + P+GG K SG GR+ + YL+ K
Sbjct: 407 YGMVGINTGLISNVVAPFGGVKQSGLGREGSKYGIEEYLETK 448
|
Succinic semialdehyde dehydrogenase is one of three enzymes constituting 4-aminobutyrate (GABA) degradation in both prokaryotes and eukaryotes, catalyzing the (NAD(P)+)-dependent catabolism reaction of succinic semialdehyde to succinate for metabolism by the citric acid cycle. The EC number depends on the cofactor: 1.2.1.24 for NAD only, 1.2.1.79 for NADP only, and 1.2.1.16 if both can be used. In Escherichia coli, succinic semialdehyde dehydrogenase is located in an unidirectionally transcribed gene cluster encoding enzymes for GABA degradation and is suggested to be cotranscribed with succinic semialdehyde transaminase from a common promoter upstream of SSADH. Similar gene arrangements can be found in characterized Ralstonia eutropha and the genome analysis of Bacillus subtilis. Prokaryotic succinic semialdehyde dehydrogenases (1.2.1.16) share high sequence homology to characterized succinic semialdehyde dehydrogenases from rat and human (1.2.1.24), exhibiting conservation of proposed cofactor binding residues, and putative active sites (G-237 & G-242, C-293 & G-259 respectively of rat SSADH). Eukaryotic SSADH enzymes exclusively utilize NAD+ as a cofactor, exhibiting little to no NADP+ activity. While a NADP+ preference has been detected in prokaryotes in addition to both NADP+- and NAD+-dependencies as in E.coli, Pseudomonas, and Klebsiella pneumoniae. The function of this alternative SSADH currently is unknown, but has been suggested to play a possible role in 4-hydroxyphenylacetic degradation. Just outside the scope of this model, are several sequences belonging to clades scoring between trusted and noise. These sequences may be actual SSADH enzymes, but lack sufficiently close characterized homologs to make a definitive assignment at this time. SSADH enzyme belongs to the aldehyde dehydrogenase family (pfam00171), sharing a common evolutionary origin and enzymatic mechanism with lactaldehyde dehydrogenase. Like in lactaldehyde dehydrogenase and succinate semialdehyde dehydrogenase, the mammalian catalytic glutamic acid and cysteine residues are conserved in all the enzymes of this family (PS00687, PS00070) [Central intermediary metabolism, Other]. Length = 448 |
| >gnl|CDD|143467 cd07149, ALDH_y4uC, Uncharacterized ALDH (y4uC) with similarity to Tortula ruralis aldehyde dehydrogenase ALDH21A1 | Back alignment and domain information |
|---|
Score = 368 bits (946), Expect = e-124
Identities = 160/393 (40%), Positives = 221/393 (56%), Gaps = 15/393 (3%)
Query: 3 KFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKM--- 59
+ A L+EE E A AL+AGK A+ ++ A TLR A A ++ GE +
Sbjct: 51 RAAQLLEERREEFARTIALEAGKPIKDAR-KEVDRAIETLRLSAEEAKRLAGETIPFDAS 109
Query: 60 --SRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYF 117
G+T+REPIGVV I P+NFP + KV PA+AAG +++KPA QTPL AL
Sbjct: 110 PGGEGRIGFTIREPIGVVAAITPFNFPLNLVAHKVGPAIAAGNAVVLKPASQTPLSALKL 169
Query: 118 AHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKP 177
A L AG+P G LNVV G G T G A+ + + +SFTGS VG + + A LK
Sbjct: 170 AELLLEAGLPKGALNVVTGSGETVGDALVTDPRVRMISFTGSPAVGEAIARKAG---LKK 226
Query: 178 VSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVE 237
V+LELG + +++ D D+ A + + G N G++C++ R++V E IYDEF ++ V
Sbjct: 227 VTLELGSNAAVIVDADADLEKAVERCVSGAFANAGQVCISVQRIFVHEDIYDEFLERFVA 286
Query: 238 KAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIGKKGYYIEPT 297
K VVGDP D GP + + + +RI ++E GA LLTGGK G +EPT
Sbjct: 287 ATKKLVVGDPLDEDTDVGPMISEAEAERIEEWVEEAVEGGARLLTGGKRDGA---ILEPT 343
Query: 298 IFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVSR 357
+ T+V DM + E+F PV++L F T++EAI AN++ YGL AG+ T DL A +R
Sbjct: 344 VLTDVPPDMKVVCEEVFAPVVSLNPFDTLDEAIAMANDSPYGLQAGVFTNDLQKALKAAR 403
Query: 358 SIRAGIIWIN--CYFAFDSDCPYGGYKMSGFGR 388
+ G + IN F D PYGG K SG GR
Sbjct: 404 ELEVGGVMINDSSTFRVDH-MPYGGVKESGTGR 435
|
Uncharacterized aldehyde dehydrogenase (ORF name y4uC) with sequence similarity to the moss Tortula ruralis aldehyde dehydrogenase ALDH21A1 (RNP123) believed to play an important role in the detoxification of aldehydes generated in response to desiccation- and salinity-stress, and similar sequences are included in this CD. Length = 453 |
| >gnl|CDD|215157 PLN02278, PLN02278, succinic semialdehyde dehydrogenase | Back alignment and domain information |
|---|
Score = 366 bits (941), Expect = e-123
Identities = 174/404 (43%), Positives = 249/404 (61%), Gaps = 5/404 (1%)
Query: 3 KFADLIEEHAEVLAVLEALDAGKLHSWAK-MGDIPGAANTLRYYAGAADKIHGEVLKMSR 61
++ DLI + E LA L L+ GK + +G++ A+ L Y+A A +++G+++
Sbjct: 92 RWYDLIIANKEDLAQLMTLEQGK--PLKEAIGEVAYGASFLEYFAEEAKRVYGDIIPSPF 149
Query: 62 A-LQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHL 120
+ L++P+GVVG I PWNFP M KV PALAAGCT++VKP+E TPL AL A L
Sbjct: 150 PDRRLLVLKQPVGVVGAITPWNFPLAMITRKVGPALAAGCTVVVKPSELTPLTALAAAEL 209
Query: 121 AKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSL 180
A AG+P GVLNVV G P G A+ + + K++FTGST VG+++M A A + +K VSL
Sbjct: 210 ALQAGIPPGVLNVVMGDAPEIGDALLASPKVRKITFTGSTAVGKKLM-AGAAATVKRVSL 268
Query: 181 ELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAK 240
ELGG +P ++FDD D++ A AL N G+ CV ++R+ VQEGIYD+F + + +
Sbjct: 269 ELGGNAPFIVFDDADLDVAVKGALASKFRNSGQTCVCANRILVQEGIYDKFAEAFSKAVQ 328
Query: 241 AWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIGKKGYYIEPTIFT 300
VVGD F+ V QGP +++ ++ S+++ +GA +L GGK G + EPT+
Sbjct: 329 KLVVGDGFEEGVTQGPLINEAAVQKVESHVQDAVSKGAKVLLGGKRHSLGGTFYEPTVLG 388
Query: 301 NVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSIR 360
+VTEDMLI + E+FGPV L +FKT EEAI AN+T GLAA I T+DL A VS ++
Sbjct: 389 DVTEDMLIFREEVFGPVAPLTRFKTEEEAIAIANDTEAGLAAYIFTRDLQRAWRVSEALE 448
Query: 361 AGIIWINCYFAFDSDCPYGGYKMSGFGRDCGLESLHNYLQVKSV 404
GI+ +N P+GG K SG GR+ + YL++K V
Sbjct: 449 YGIVGVNEGLISTEVAPFGGVKQSGLGREGSKYGIDEYLEIKYV 492
|
Length = 498 |
| >gnl|CDD|143438 cd07120, ALDH_PsfA-ACA09737, Pseudomonas putida aldehyde dehydrogenase PsfA (ACA09737)-like | Back alignment and domain information |
|---|
Score = 363 bits (933), Expect = e-123
Identities = 165/409 (40%), Positives = 231/409 (56%), Gaps = 6/409 (1%)
Query: 1 MLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMS 60
+L+ AD E +AE LA L AL+ GK+ A +I GA + LRYYAG A G +++
Sbjct: 48 LLELADAFEANAERLARLLALENGKILGEA-RFEISGAISELRYYAGLARTEAGRMIEPE 106
Query: 61 RALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLI-ALYFAH 119
LREP+GV G I+PWN P + ++PALAAGCT++VKPA QT I A
Sbjct: 107 PGSFSLVLREPMGVAGIIVPWNSPVVLLVRSLAPALAAGCTVVVKPAGQTAQINAAIIRI 166
Query: 120 LAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVS 179
LA++ +P GV+N+ G A + + D+D +SFTGST GR +M AAA LK +
Sbjct: 167 LAEIPSLPAGVVNLFTESGSEGAAHLVASPDVDVISFTGSTATGRAIMAAAA-PTLKRLG 225
Query: 180 LELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKA 239
LELGGK+P ++FDD D++ A + G+ C+A SRV VQ I DE +L +
Sbjct: 226 LELGGKTPCIVFDDADLDAALPKLERALTIFAGQFCMAGSRVLVQRSIADEVRDRLAARL 285
Query: 240 KAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGAT-LLTGGKPIGK--KGYYIEP 296
A VG DPA GP +D+ DR+ +E GA +L GG KG ++ P
Sbjct: 286 AAVKVGPGLDPASDMGPLIDRANVDRVDRMVERAIAAGAEVVLRGGPVTEGLAKGAFLRP 345
Query: 297 TIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVS 356
T+ D I + EIFGPV+ L F EA+ AN+T YGLAA + T+DL A V+
Sbjct: 346 TLLEVDDPDADIVQEEIFGPVLTLETFDDEAEAVALANDTDYGLAASVWTRDLARAMRVA 405
Query: 357 RSIRAGIIWINCYFAFDSDCPYGGYKMSGFGRDCGLESLHNYLQVKSVV 405
R+IRAG +WIN + ++ GGY+ SG GR G+ +L ++++ K +
Sbjct: 406 RAIRAGTVWINDWNKLFAEAEEGGYRQSGLGRLHGVAALEDFIEYKHIY 454
|
Included in this CD is the aldehyde dehydrogenase (PsfA, locus ACA09737) of Pseudomonas putida involved in furoic acid metabolism. Transcription of psfA was induced in response to 2-furoic acid, furfuryl alcohol, and furfural. Length = 455 |
| >gnl|CDD|143468 cd07150, ALDH_VaniDH_like, Pseudomonas putida vanillin dehydrogenase-like | Back alignment and domain information |
|---|
Score = 359 bits (924), Expect = e-121
Identities = 158/406 (38%), Positives = 240/406 (59%), Gaps = 7/406 (1%)
Query: 1 MLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMS 60
+LK A+++E A+ L L + G + A + LR AG ++ GE L
Sbjct: 49 LLKAAEIMERRADDLIDLLIDEGGSTYGKA-WFETTFTPELLRAAAGECRRVRGETLPSD 107
Query: 61 RA-LQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAH 119
++R P+GVV I P+N+P + KV+ ALAAG T+++KP+E+TP+I L A
Sbjct: 108 SPGTVSMSVRRPLGVVAGITPFNYPLILATKKVAFALAAGNTVVLKPSEETPVIGLKIAE 167
Query: 120 LAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVS 179
+ + AG+P GV NVV G G G + + V+FTGST VGR++ + A +LK ++
Sbjct: 168 IMEEAGLPKGVFNVVTGGGAEVGDELVDDPRVRMVTFTGSTAVGREIAEKAG-RHLKKIT 226
Query: 180 LELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKA 239
LELGGK+PL++ D D++ A A G ++G+IC+++SR+ V+E +YDEF KK V +A
Sbjct: 227 LELGGKNPLIVLADADLDYAVRAAAFGAFMHQGQICMSASRIIVEEPVYDEFVKKFVARA 286
Query: 240 KAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIGKKGYYIEPTIF 299
VGDP DP GP + +Q +RI +E +GA LLTGGK G + +PT+
Sbjct: 287 SKLKVGDPRDPDTVIGPLISPRQVERIKRQVEDAVAKGAKLLTGGK---YDGNFYQPTVL 343
Query: 300 TNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSI 359
T+VT DM I + E FGPV +++ K EEA++ AN+T YGL+A I+T DL A ++ +
Sbjct: 344 TDVTPDMRIFREETFGPVTSVIPAKDAEEALELANDTEYGLSAAILTNDLQRAFKLAERL 403
Query: 360 RAGIIWINCYFAFD-SDCPYGGYKMSGFGRDCGLESLHNYLQVKSV 404
+G++ IN D + P+GG K SGFGR+ G S+ + ++K +
Sbjct: 404 ESGMVHINDPTILDEAHVPFGGVKASGFGREGGEWSMEEFTELKWI 449
|
Vanillin dehydrogenase (Vdh, VaniDH) involved in the metabolism of ferulic acid and other related sequences are included in this CD. The E. coli vanillin dehydrogenase (LigV) preferred NAD+ to NADP+ and exhibited a broad substrate preference, including vanillin, benzaldehyde, protocatechualdehyde, m-anisaldehyde, and p-hydroxybenzaldehyde. Length = 451 |
| >gnl|CDD|143449 cd07131, ALDH_AldH-CAJ73105, Uncharacterized Candidatus kuenenia aldehyde dehydrogenase AldH (CAJ73105)-like | Back alignment and domain information |
|---|
Score = 359 bits (923), Expect = e-121
Identities = 176/417 (42%), Positives = 256/417 (61%), Gaps = 21/417 (5%)
Query: 1 MLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVL--- 57
+ + A+L+++ E LA L + GK + + GD+ A + +Y AG ++ GE +
Sbjct: 65 LFRAAELLKKRKEELARLVTREMGKPLAEGR-GDVQEAIDMAQYAAGEGRRLFGETVPSE 123
Query: 58 ---KMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIA 114
K + T R+PIGVV I PWNFP + K+ PAL G T++ KPAE TP A
Sbjct: 124 LPNKDA-----MTRRQPIGVVALITPWNFPVAIPSWKIFPALVCGNTVVFKPAEDTPACA 178
Query: 115 LYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSN 174
L L AG+P GV+NVV G G G A+ H D+D VSFTGST+VG ++ + A N
Sbjct: 179 LKLVELFAEAGLPPGVVNVVHGRGEEVGEALVEHPDVDVVSFTGSTEVGERIGETCARPN 238
Query: 175 LKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKK 234
K V+LE+GGK+P+++ DD D++ A + AL G+ C A+SR+ V E +YDEF K+
Sbjct: 239 -KRVALEMGGKNPIIVMDDADLDLALEGALWSAFGTTGQRCTATSRLIVHESVYDEFLKR 297
Query: 235 LVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPI----GKK 290
VE+AK VGD D GP +++ Q +++L+Y E GK EGATLL GG+ + +K
Sbjct: 298 FVERAKRLRVGDGLDEETDMGPLINEAQLEKVLNYNEIGKEEGATLLLGGERLTGGGYEK 357
Query: 291 GYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLN 350
GY++EPT+FT+VT DM IA+ EIFGPV+AL++ ++EEAI+ AN+T YGL++ I T+D+N
Sbjct: 358 GYFVEPTVFTDVTPDMRIAQEEIFGPVVALIEVSSLEEAIEIANDTEYGLSSAIYTEDVN 417
Query: 351 VANTVSRSIRAGIIWIN--CYFAFDSDCPYGGYKMSGFG-RDCGLESLHNYLQVKSV 404
A R + AGI ++N A + P+GG K SG G R+ G +L + + K+V
Sbjct: 418 KAFRARRDLEAGITYVNAPTIGA-EVHLPFGGVKKSGNGHREAGTTALDAFTEWKAV 473
|
Uncharacterized aldehyde dehydrogenase of Candidatus kuenenia AldH (locus CAJ73105) and similar sequences with similarity to alpha-aminoadipic semialdehyde dehydrogenase (AASADH, human ALDH7A1, EC=1.2.1.31), Arabidopsis ALDH7B4, and Streptomyces clavuligerus delta-1-piperideine-6-carboxylate dehydrogenase (P6CDH) are included in this CD. Length = 478 |
| >gnl|CDD|143417 cd07099, ALDH_DDALDH, Methylomonas sp | Back alignment and domain information |
|---|
Score = 344 bits (886), Expect = e-115
Identities = 155/415 (37%), Positives = 222/415 (53%), Gaps = 18/415 (4%)
Query: 2 LKFADLIEEHAEVLAVLEALDAGKLHSWAKMG-DIPGAANTLRYYAGAADKI-------H 53
L++ + +HA+ LA L + GK A G ++ A + + A A ++
Sbjct: 47 LRWKRALADHADELAELLHAETGK--PRADAGLEVLLALEAIDWAARNAPRVLAPRKVPT 104
Query: 54 GEVLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLI 113
G ++ +A Y P GVVG I PWN+P + PALAAG +++KP+E TPL+
Sbjct: 105 GLLMPNKKATVEY---RPYGVVGVISPWNYPLLTPMGDIIPALAAGNAVVLKPSEVTPLV 161
Query: 114 ALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATS 173
A AG P GVL VV G G T A I + +DKV+FTGS GR+VM AAA
Sbjct: 162 GELLAEAWAAAGPPQGVLQVVTGDGATGAALIDA--GVDKVAFTGSVATGRKVMAAAA-E 218
Query: 174 NLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEK 233
L PV LELGGK P+++ D D+ AA A+ G + N G+ C++ RVYV E +YDEF
Sbjct: 219 RLIPVVLELGGKDPMIVLADADLERAAAAAVWGAMVNAGQTCISVERVYVHESVYDEFVA 278
Query: 234 KLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIGKKGYY 293
+LV KA+A G GP +Q D + +++ +GA LTGG G +
Sbjct: 279 RLVAKARALRPGADDIGDADIGPMTTARQLDIVRRHVDDAVAKGAKALTGGARSNGGGPF 338
Query: 294 IEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVAN 353
EPT+ T+V DM + + E FGPV+ +M +EAI AN++RYGL+A + ++DL A
Sbjct: 339 YEPTVLTDVPHDMDVMREETFGPVLPVMPVADEDEAIALANDSRYGLSASVFSRDLARAE 398
Query: 354 TVSRSIRAGIIWINC--YFAFDSDCPYGGYKMSGFGRDCGLESLHNYLQVKSVVT 406
++R + AG + IN A P+GG K SG GR G E L + + K++
Sbjct: 399 AIARRLEAGAVSINDVLLTAGIPALPFGGVKDSGGGRRHGAEGLREFCRPKAIAR 453
|
4,4'-diapolycopene-dialdehyde dehydrogenase-like. The 4,4'-diapolycopene-dialdehyde dehydrogenase (DDALDH) involved in C30 carotenoid synthesis in Methylomonas sp. strain 16a and other similar sequences are present in this CD. DDALDH converts 4,4'-diapolycopene-dialdehyde into 4,4'-diapolycopene-diacid. Length = 453 |
| >gnl|CDD|132260 TIGR03216, OH_muco_semi_DH, 2-hydroxymuconic semialdehyde dehydrogenase | Back alignment and domain information |
|---|
Score = 345 bits (887), Expect = e-115
Identities = 163/413 (39%), Positives = 229/413 (55%), Gaps = 13/413 (3%)
Query: 3 KFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKM--- 59
AD IE + E D GK S A DIP A R +A E +M
Sbjct: 67 AVADEIERRFDDFLAAEVADTGKPRSLASHLDIPRGAANFRVFADVVKNAPTECFEMATP 126
Query: 60 --SRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYF 117
AL Y +R+P+GVVG I PWN P + KV PALA G T++VKP+E+TP A
Sbjct: 127 DGKGALN-YAVRKPLGVVGVISPWNLPLLLMTWKVGPALACGNTVVVKPSEETPGTATLL 185
Query: 118 AHLAKLAGVPDGVLNVVPGFGP-TAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLK 176
+ GVP GV NVV GFGP +AG + H +D ++FTG T G +M+AAA +K
Sbjct: 186 GEVMNAVGVPKGVYNVVHGFGPDSAGEFLTRHPGVDAITFTGETRTGSAIMKAAADG-VK 244
Query: 177 PVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLV 236
PVS ELGGK+ ++F D D + A L N G++C+ + RVYV+ I+D F L
Sbjct: 245 PVSFELGGKNAAIVFADCDFDAAVAGILRSAFLNTGQVCLGTERVYVERPIFDRFVAALK 304
Query: 237 EKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGG-----KPIGKKG 291
+A++ +G P DPA GP + + D++LSY EGAT++TGG G
Sbjct: 305 ARAESLKIGVPDDPATNMGPLISAEHRDKVLSYYALAVEEGATVVTGGGVPDFGDALAGG 364
Query: 292 YYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNV 351
+++PTI+T + + + EIFGP + F + EE I AN+T YGLAA + T+DL+
Sbjct: 365 AWVQPTIWTGLPDSARVVTEEIFGPCCHIAPFDSEEEVIALANDTPYGLAASVWTEDLSR 424
Query: 352 ANTVSRSIRAGIIWINCYFAFDSDCPYGGYKMSGFGRDCGLESLHNYLQVKSV 404
A+ V+R + GI+W+N +F D P+GG K+SG GR+ G+ SL Y ++ +V
Sbjct: 425 AHRVARQMEVGIVWVNSWFLRDLRTPFGGSKLSGIGREGGVHSLEFYTELTNV 477
|
Members of this protein family are 2-hydroxymuconic semialdehyde dehydrogenase. Many aromatic compounds are catabolized by way of the catechol, via the meta-cleavage pathway, to pyruvate and acetyl-CoA. This enzyme performs the second of seven steps in that pathway for catechol degradation [Energy metabolism, Other]. Length = 481 |
| >gnl|CDD|143418 cd07100, ALDH_SSADH1_GabD1, Mycobacterium tuberculosis succinate-semialdehyde dehydrogenase 1-like | Back alignment and domain information |
|---|
Score = 332 bits (854), Expect = e-111
Identities = 154/407 (37%), Positives = 213/407 (52%), Gaps = 5/407 (1%)
Query: 1 MLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYA-GAADKIHGEVLKM 59
+ K ADL+ E + LA L L+ GK + A+ ++ A RYYA A + E ++
Sbjct: 27 LRKLADLLRERKDELARLITLEMGKPIAEAR-AEVEKCAWICRYYAENAEAFLADEPIE- 84
Query: 60 SRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAH 119
+ A + Y EP+GVV I+PWNFP F +P L AG T+++K A P AL
Sbjct: 85 TDAGKAYVRYEPLGVVLGIMPWNFPFWQVFRFAAPNLMAGNTVLLKHASNVPGCALAIEE 144
Query: 120 LAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVS 179
L + AG P+GV + A IA + V+ TGS GR V A NLK
Sbjct: 145 LFREAGFPEGVFQNLLIDSDQVEAIIADPR-VRGVTLTGSERAGRAVAAEAG-KNLKKSV 202
Query: 180 LELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKA 239
LELGG P ++ DD D++ A A+ G L N G+ C+A+ R V E +YDEF +K VE
Sbjct: 203 LELGGSDPFIVLDDADLDKAVKTAVKGRLQNAGQSCIAAKRFIVHEDVYDEFLEKFVEAM 262
Query: 240 KAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIGKKGYYIEPTIF 299
A VGDP D GP K D + +E GATLL GGK G + PT+
Sbjct: 263 AALKVGDPMDEDTDLGPLARKDLRDELHEQVEEAVAAGATLLLGGKRPDGPGAFYPPTVL 322
Query: 300 TNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSI 359
T+VT M E+FGPV A++K K EEAI AN++ +GL + T DL A V+R +
Sbjct: 323 TDVTPGMPAYDEELFGPVAAVIKVKDEEEAIALANDSPFGLGGSVFTTDLERAERVARRL 382
Query: 360 RAGIIWINCYFAFDSDCPYGGYKMSGFGRDCGLESLHNYLQVKSVVT 406
AG+++IN D P+GG K SG+GR+ G + ++ +K+V
Sbjct: 383 EAGMVFINGMVKSDPRLPFGGVKRSGYGRELGRFGIREFVNIKTVWV 429
|
Succinate-semialdehyde dehydrogenase 1 (SSADH1, GabD1, EC=1.2.1.16) catalyzes the NADP(+)-dependent oxidation of succinate semialdehyde (SSA) to succinate. SSADH activity in Mycobacterium tuberculosis (Mtb) is encoded by both gabD1 (Rv0234c) and gabD2 (Rv1731). The Mtb GabD1 SSADH1 reportedly is an enzyme of the gamma-aminobutyrate shunt, which forms a functional link between two TCA half-cycles by converting alpha-ketoglutarate to succinate. Length = 429 |
| >gnl|CDD|143442 cd07124, ALDH_PutA-P5CDH-RocA, Delta(1)-pyrroline-5-carboxylate dehydrogenase, RocA | Back alignment and domain information |
|---|
Score = 334 bits (858), Expect = e-110
Identities = 159/419 (37%), Positives = 235/419 (56%), Gaps = 22/419 (5%)
Query: 1 MLKFADLIEEHAEVLAVLEALDAGKLHSWAK-MGDIPGAANTLRYYAGAADKIHGEVLKM 59
+L+ A L+ LA L+ GK +WA+ D+ A + L YYA ++ G ++M
Sbjct: 97 LLRAAALLRRRRFELAAWMVLEVGK--NWAEADADVAEAIDFLEYYAREMLRLRGFPVEM 154
Query: 60 SRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAH 119
+ P+GV I PWNFP + + AL G T+++KPAE TP+IA
Sbjct: 155 VPGEDNRYVYRPLGVGAVISPWNFPLAILAGMTTAALVTGNTVVLKPAEDTPVIAAKLVE 214
Query: 120 LAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAAT-----SN 174
+ + AG+P GV+N +PG G G + H D+ ++FTGS +VG ++ + AA
Sbjct: 215 ILEEAGLPPGVVNFLPGPGEEVGDYLVEHPDVRFIAFTGSREVGLRIYERAAKVQPGQKW 274
Query: 175 LKPVSLELGGKSPLLIFDDVDVNTAADMALLGIL---FN-KGEICVASSRVYVQEGIYDE 230
LK V E+GGK+ +++ +D D+ D A GI+ F +G+ C A SRV V E +YDE
Sbjct: 275 LKRVIAEMGGKNAIIVDEDADL----DEAAEGIVRSAFGFQGQKCSACSRVIVHESVYDE 330
Query: 231 FEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIG-- 288
F ++LVE+ KA VGDP DP V GP +DK DRI YIE GK EG LL GG+ +
Sbjct: 331 FLERLVERTKALKVGDPEDPEVYMGPVIDKGARDRIRRYIEIGKSEG-RLLLGGEVLELA 389
Query: 289 KKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKD 348
+GY+++PTIF +V D +A+ EIFGPV+A++K K +EA++ AN+T YGL G+ ++
Sbjct: 390 AEGYFVQPTIFADVPPDHRLAQEEIFGPVLAVIKAKDFDEALEIANDTEYGLTGGVFSRS 449
Query: 349 LNVANTVSRSIRAGIIWIN--CYFAFDSDCPYGGYKMSGFG-RDCGLESLHNYLQVKSV 404
R G ++ N A P+GG+KMSG G + G + L ++Q K+V
Sbjct: 450 PEHLERARREFEVGNLYANRKITGALVGRQPFGGFKMSGTGSKAGGPDYLLQFMQPKTV 508
|
Delta(1)-pyrroline-5-carboxylate dehydrogenase (EC=1.5.1.12 ), RocA: a proline catabolic enzyme of the aldehyde dehydrogenase (ALDH) protein superfamily. The proline catabolic enzymes, proline dehydrogenase and Delta(1)-pyrroline-5-carboxylate dehydrogenase (P5CDH), catalyze the two-step oxidation of proline to glutamate; P5CDH catalyzes the oxidation of glutamate semialdehyde, utilizing NAD+ as the electron acceptor. In some bacteria, the two enzymes are fused into the bifunctional flavoenzyme, proline utilization A (PutA). In this CD, monofunctional enzyme sequences such as seen in the Bacillus subtilis RocA P5CDH are also present. These enzymes play important roles in cellular redox control, superoxide generation, and apoptosis. Length = 512 |
| >gnl|CDD|143463 cd07145, ALDH_LactADH_F420-Bios, Methanocaldococcus jannaschii NAD+-dependent lactaldehyde dehydrogenase-like | Back alignment and domain information |
|---|
Score = 328 bits (842), Expect = e-109
Identities = 151/396 (38%), Positives = 231/396 (58%), Gaps = 12/396 (3%)
Query: 1 MLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMS 60
++K A+LIE E LA L ++ GK ++ ++ + A A + GE + +
Sbjct: 49 LMKVAELIERRKEELAKLLTIEVGKPIKQSR-VEVERTIRLFKLAAEEAKVLRGETIPVD 107
Query: 61 RALQG-----YTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIAL 115
+T+REPIGVVG I P+NFP +F K++PA+A G +++VKP+ TPL A+
Sbjct: 108 AYEYNERRIAFTVREPIGVVGAITPFNFPANLFAHKIAPAIAVGNSVVVKPSSNTPLTAI 167
Query: 116 YFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNL 175
A + + AG+P GV+NVV G+G G I ++ ++ +SFTGST VG + A +
Sbjct: 168 ELAKILEEAGLPPGVINVVTGYGSEVGDEIVTNPKVNMISFTGSTAVGLLIASKAGGT-G 226
Query: 176 KPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKL 235
K V+LELGG P+++ D D+ A +A+ G N G++C A R+ V+E +YD+F K L
Sbjct: 227 KKVALELGGSDPMIVLKDADLERAVSIAVRGRFENAGQVCNAVKRILVEEEVYDKFLKLL 286
Query: 236 VEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIGKKGYYIE 295
VEK K VGDP D + GP + + +R+ + + +G +L GGK +G +
Sbjct: 287 VEKVKKLKVGDPLDESTDLGPLISPEAVERMENLVNDAVEKGGKILYGGK--RDEGSFFP 344
Query: 296 PTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTV 355
PT+ N T DM++ K E+FGPV+ + K K EEA++ AN+T YGL A + T D+N A V
Sbjct: 345 PTVLENDTPDMIVMKEEVFGPVLPIAKVKDDEEAVEIANSTEYGLQASVFTNDINRALKV 404
Query: 356 SRSIRAGIIWIN--CYFAFDSDCPYGGYKMSGFGRD 389
+R + AG + IN F +D+ P+GG+K SG GR+
Sbjct: 405 ARELEAGGVVINDSTRFRWDN-LPFGGFKKSGIGRE 439
|
NAD+-dependent, lactaldehyde dehydrogenase (EC=1.2.1.22) involved the biosynthesis of coenzyme F(420) in Methanocaldococcus jannaschii through the oxidation of lactaldehyde to lactate and generation of NAPH, and similar sequences are included in this CD. Length = 456 |
| >gnl|CDD|143423 cd07105, ALDH_SaliADH, Salicylaldehyde dehydrogenase, DoxF-like | Back alignment and domain information |
|---|
Score = 320 bits (822), Expect = e-106
Identities = 147/410 (35%), Positives = 219/410 (53%), Gaps = 13/410 (3%)
Query: 1 MLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMS 60
+LK ADL+E + + G +WA ++ AA LR A +I G +
Sbjct: 28 LLKAADLLESRRDEFIEAMMEETGATAAWAGF-NVDLAAGMLREAASLITQIIGGSIPSD 86
Query: 61 RALQ-GYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAH 119
+ ++EP+GVV I PWN P + ++ LAAG T+++K +E +P
Sbjct: 87 KPGTLAMVVKEPVGVVLGIAPWNAPVILGTRAIAYPLAAGNTVVLKASELSPRTHWLIGR 146
Query: 120 LAKLAGVPDGVLNVV---PGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLK 176
+ AG+P GVLNVV P P A+ +H + KV+FTGST VGR + + AA +LK
Sbjct: 147 VFHEAGLPKGVLNVVTHSPEDAPEVVEALIAHPAVRKVNFTGSTRVGRIIAETAA-KHLK 205
Query: 177 PVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLV 236
PV LELGGK+P ++ +D D++ AA+ AL G N G+IC+++ R+ V E I DEF +KL
Sbjct: 206 PVLLELGGKAPAIVLEDADLDAAANAALFGAFLNSGQICMSTERIIVHESIADEFVEKLK 265
Query: 237 EKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKP-IGKKGYYIE 295
A+ G V G V DR+ ++ +GA L+ GG G +
Sbjct: 266 AAAEKLFAGP-----VVLGSLVSAAAADRVKELVDDALSKGAKLVVGGLADESPSGTSMP 320
Query: 296 PTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTV 355
PTI NVT DM I E FGPV+++++ K EEA++ AN++ YGL+A + T+DL A V
Sbjct: 321 PTILDNVTPDMDIYSEESFGPVVSIIRVKDEEEAVRIANDSEYGLSAAVFTRDLARALAV 380
Query: 356 SRSIRAGIIWINCYFAFDSDC-PYGGYKMSGFGRDCGLESLHNYLQVKSV 404
++ I +G + IN D P+GG K SG+GR G + + + K +
Sbjct: 381 AKRIESGAVHINGMTVHDEPTLPHGGVKSSGYGRFNGKWGIDEFTETKWI 430
|
Salicylaldehyde dehydrogenase (DoxF, SaliADH, EC=1.2.1.65) involved in the upper naphthalene catabolic pathway of Pseudomonas strain C18 and other similar sequences are present in this CD. Length = 432 |
| >gnl|CDD|143469 cd07151, ALDH_HBenzADH, NADP+-dependent p-hydroxybenzaldehyde dehydrogenase-like | Back alignment and domain information |
|---|
Score = 320 bits (822), Expect = e-106
Identities = 157/396 (39%), Positives = 222/396 (56%), Gaps = 18/396 (4%)
Query: 1 MLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVL--- 57
+ K A ++EE + + ++G A + A R A ++ G +L
Sbjct: 60 LEKAAQILEERRDEIVEWLIRESGSTRIKA-NIEWGAAMAITREAATFPLRMEGRILPSD 118
Query: 58 ---KMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIA 114
K +R REP+GVVG I PWNFP + V+PALA G +++KPA TP+
Sbjct: 119 VPGKENR-----VYREPLGVVGVISPWNFPLHLSMRSVAPALALGNAVVLKPASDTPITG 173
Query: 115 -LYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATS 173
L A + + AG+P GVLNVV G G G A H +SFTGST VGR + + A
Sbjct: 174 GLLLAKIFEEAGLPKGVLNVVVGAGSEIGDAFVEHPVPRLISFTGSTPVGRHIGELAGR- 232
Query: 174 NLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEK 233
+LK V+LELGG +P ++ +D D++ A + A+ G ++G+IC+A +R+ V E +YDEF +
Sbjct: 233 HLKKVALELGGNNPFVVLEDADIDAAVNAAVFGKFLHQGQICMAINRIIVHEDVYDEFVE 292
Query: 234 KLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIGKKGYY 293
K VE+ KA GDP DP GP +++ Q D +L IE EGATLL GG+ +G
Sbjct: 293 KFVERVKALPYGDPSDPDTVVGPLINESQVDGLLDKIEQAVEEGATLLVGGEA---EGNV 349
Query: 294 IEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVAN 353
+EPT+ ++VT DM IA+ EIFGPV ++K EEA++ AN+T YGL+ + T DL
Sbjct: 350 LEPTVLSDVTNDMEIAREEIFGPVAPIIKADDEEEALELANDTEYGLSGAVFTSDLERGV 409
Query: 354 TVSRSIRAGIIWINCYFAFDS-DCPYGGYKMSGFGR 388
+R I AG+ IN D P+GG K SG GR
Sbjct: 410 QFARRIDAGMTHINDQPVNDEPHVPFGGEKNSGLGR 445
|
NADP+-dependent, p-hydroxybenzaldehyde dehydrogenase (PchA, HBenzADH) which catalyzes oxidation of p-hydroxybenzaldehyde to p-hydroxybenzoic acid and other related sequences are included in this CD. Length = 465 |
| >gnl|CDD|143405 cd07086, ALDH_F7_AASADH-like, NAD+-dependent alpha-aminoadipic semialdehyde dehydrogenase and related proteins | Back alignment and domain information |
|---|
Score = 317 bits (815), Expect = e-104
Identities = 135/418 (32%), Positives = 210/418 (50%), Gaps = 39/418 (9%)
Query: 4 FADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMSRA- 62
+ + + E L L +L+ GK+ G++ + Y G + ++G + R
Sbjct: 66 IGEALRKKKEALGRLVSLEMGKILPEGL-GEVQEMIDICDYAVGLSRMLYGLTIPSERPG 124
Query: 63 LQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIAL----YFA 118
+ P+GVVG I +NFP + + AL G T++ KP+E TPL A+ A
Sbjct: 125 HRLMEQWNPLGVVGVITAFNFPVAVPGWNAAIALVCGNTVVWKPSETTPLTAIAVTKILA 184
Query: 119 HLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPV 178
+ + G+P GV+N+V G G G + + VSFTGST+VGR+V + A V
Sbjct: 185 EVLEKNGLPPGVVNLVTGGGD-GGELLVHDPRVPLVSFTGSTEVGRRVGETVARRF-GRV 242
Query: 179 SLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEK 238
LELGG + +++ DD D++ A L + G+ C + R+ V E +YDEF ++LV+
Sbjct: 243 LLELGGNNAIIVMDDADLDLAVRAVLFAAVGTAGQRCTTTRRLIVHESVYDEFLERLVKA 302
Query: 239 AKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPI--GKKGYYIEP 296
K +GDP D GP +++ ++ L+ IE K +G T+LTGGK I G+ G Y+EP
Sbjct: 303 YKQVRIGDPLDEGTLVGPLINQAAVEKYLNAIEIAKSQGGTVLTGGKRIDGGEPGNYVEP 362
Query: 297 TIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVS 356
TI T VT+D I + E F P++ ++KF ++EEAI N+ GL++ I T+DL A
Sbjct: 363 TIVTGVTDDARIVQEETFAPILYVIKFDSLEEAIAINNDVPQGLSSSIFTEDLREAFR-- 420
Query: 357 RSIRAGIIWINCYFAFDSDC----------------PYGGYKMSGFGRDCGLESLHNY 398
W+ SDC +GG K +G GR+ G ++ Y
Sbjct: 421 --------WLG---PKGSDCGIVNVNIPTSGAEIGGAFGGEKETGGGRESGSDAWKQY 467
|
ALDH subfamily which includes the NAD+-dependent, alpha-aminoadipic semialdehyde dehydrogenase (AASADH, EC=1.2.1.31), also known as Antiquitin-1, ALDH7A1, ALDH7B or delta-1-piperideine-6-carboxylate dehydrogenase (P6CDH), and other similar sequences, such as the uncharacterized aldehyde dehydrogenase of Candidatus kuenenia AldH (locus CAJ73105). Length = 478 |
| >gnl|CDD|236501 PRK09407, gabD2, succinic semialdehyde dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Score = 316 bits (813), Expect = e-103
Identities = 160/421 (38%), Positives = 234/421 (55%), Gaps = 27/421 (6%)
Query: 1 MLKFADLIEEHAEVLAVLEALDAGK--LHSWAKMGDIPGAANTLRYYAGAADKIHGEVLK 58
+L+F DL+ E+ E L L L+ GK H++ ++ D+ A T RYYA A K+ L
Sbjct: 82 LLRFHDLVLENREELLDLVQLETGKARRHAFEEVLDV---ALTARYYARRAPKL----LA 134
Query: 59 MSR---ALQGYT----LREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTP 111
R AL T LR+P GVVG I PWN+P T+ PAL AG +++KP QTP
Sbjct: 135 PRRRAGALPVLTKTTELRQPKGVVGVISPWNYPLTLAVSDAIPALLAGNAVVLKPDSQTP 194
Query: 112 LIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAA 171
L AL L AG+P + VV G GP G A+ + D + FTGST GR + + A
Sbjct: 195 LTALAAVELLYEAGLPRDLWQVVTGPGPVVGTALVDN--ADYLMFTGSTATGRVLAEQAG 252
Query: 172 TSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEF 231
L SLELGGK+P+++ DD D++ AA A+ N G++C++ R+YV E IYDEF
Sbjct: 253 -RRLIGFSLELGGKNPMIVLDDADLDKAAAGAVRACFSNAGQLCISIERIYVHESIYDEF 311
Query: 232 EKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKP---IG 288
+ V +A +G +D + G + + Q + + ++++ +GAT+L GGK +G
Sbjct: 312 VRAFVAAVRAMRLGAGYDYSADMGSLISEAQLETVSAHVDDAVAKGATVLAGGKARPDLG 371
Query: 289 KKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKD 348
+ EPT+ T VT DM +A+ E FGPV+++ V+EA++ AN+T YGL A + T D
Sbjct: 372 P--LFYEPTVLTGVTPDMELAREETFGPVVSVYPVADVDEAVERANDTPYGLNASVWTGD 429
Query: 349 LNVANTVSRSIRAGIIWINCYF--AFDS-DCPYGGYKMSGFGRDCGLESLHNYLQVKSVV 405
++ IRAG + +N + A+ S D P GG K SG GR G E L Y + +++
Sbjct: 430 TARGRAIAARIRAGTVNVNEGYAAAWGSVDAPMGGMKDSGLGRRHGAEGLLKYTESQTIA 489
Query: 406 T 406
T
Sbjct: 490 T 490
|
Length = 524 |
| >gnl|CDD|143419 cd07101, ALDH_SSADH2_GabD2, Mycobacterium tuberculosis succinate-semialdehyde dehydrogenase 2-like | Back alignment and domain information |
|---|
Score = 311 bits (798), Expect = e-102
Identities = 156/418 (37%), Positives = 227/418 (54%), Gaps = 23/418 (5%)
Query: 2 LKFADLIEEHAEVLAVLEALDAGK--LHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKM 59
L+F DL+ E + L L L+ GK H++ ++ D A RYYA A++ +LK
Sbjct: 47 LRFHDLVLERRDELLDLIQLETGKARRHAFEEVLD---VAIVARYYARRAER----LLKP 99
Query: 60 SR---ALQGYT----LREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPL 112
R A+ T R P GVVG I PWN+P T+ PAL AG +++KP QT L
Sbjct: 100 RRRRGAIPVLTRTTVNRRPKGVVGVISPWNYPLTLAVSDAIPALLAGNAVVLKPDSQTAL 159
Query: 113 IALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAAT 172
AL+ L AG+P + VV G G G AI + D V FTGST GR V + A
Sbjct: 160 TALWAVELLIEAGLPRDLWQVVTGPGSEVGGAIVDNADY--VMFTGSTATGRVVAERAG- 216
Query: 173 SNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFE 232
L SLELGGK+P+++ +D D++ AA A+ N G++CV+ R+YV E +YDEF
Sbjct: 217 RRLIGCSLELGGKNPMIVLEDADLDKAAAGAVRACFSNAGQLCVSIERIYVHESVYDEFV 276
Query: 233 KKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIGKKG- 291
++ V + +A +G D G + + Q DR+ ++++ +GAT+L GG+ G
Sbjct: 277 RRFVARTRALRLGAALDYGPDMGSLISQAQLDRVTAHVDDAVAKGATVLAGGRARPDLGP 336
Query: 292 YYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNV 351
Y+ EPT+ T VTEDM + E FGPV+++ + +EAI+ AN+T YGL A + T+D
Sbjct: 337 YFYEPTVLTGVTEDMELFAEETFGPVVSIYRVADDDEAIELANDTDYGLNASVWTRDGAR 396
Query: 352 ANTVSRSIRAGIIWINCYFAF---DSDCPYGGYKMSGFGRDCGLESLHNYLQVKSVVT 406
++ +RAG + +N +A D P GG K SG GR G E L Y + ++V
Sbjct: 397 GRRIAARLRAGTVNVNEGYAAAWASIDAPMGGMKDSGLGRRHGAEGLLKYTETQTVAV 454
|
Succinate-semialdehyde dehydrogenase 2 (SSADH2) and similar proteins are in this CD. SSADH1 (GabD1, EC=1.2.1.16) catalyzes the NADP(+)-dependent oxidation of succinate semialdehyde to succinate. SSADH activity in Mycobacterium tuberculosis is encoded by both gabD1 (Rv0234c) and gabD2 (Rv1731), however ,the Vmax of GabD1 was shown to be much higher than that of GabD2, and GabD2 (SSADH2) is likely to serve physiologically as a dehydrogenase for a different aldehyde(s). Length = 454 |
| >gnl|CDD|143395 cd06534, ALDH-SF, NAD(P)+-dependent aldehyde dehydrogenase superfamily | Back alignment and domain information |
|---|
Score = 307 bits (788), Expect = e-102
Identities = 125/237 (52%), Positives = 163/237 (68%), Gaps = 3/237 (1%)
Query: 1 MLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLK-M 59
+ K ADL+EE E LA LE L+ GK A G++ A +T RY AG ADK+ G L
Sbjct: 22 LRKIADLLEERREELAALETLETGKPIEEAL-GEVARAIDTFRYAAGLADKLGGPELPSP 80
Query: 60 SRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAH 119
+ Y REP+GVVG I PWNFP + K++PALAAG T+++KP+E TPL AL A
Sbjct: 81 DPGGEAYVRREPLGVVGVITPWNFPLLLAAWKLAPALAAGNTVVLKPSELTPLTALALAE 140
Query: 120 LAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVS 179
L + AG+P GV+NVVPG G GAA+ SH +DK+SFTGST VG+ +M+AAA NLKPV+
Sbjct: 141 LLQEAGLPPGVVNVVPGGGDEVGAALLSHPRVDKISFTGSTAVGKAIMKAAA-ENLKPVT 199
Query: 180 LELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLV 236
LELGGKSP+++ +D D++ A + A+ G FN G+IC A+SR+ V E IYDEF +KLV
Sbjct: 200 LELGGKSPVIVDEDADLDAAVEGAVFGAFFNAGQICTAASRLLVHESIYDEFVEKLV 256
|
The aldehyde dehydrogenase superfamily (ALDH-SF) of NAD(P)+-dependent enzymes, in general, oxidize a wide range of endogenous and exogenous aliphatic and aromatic aldehydes to their corresponding carboxylic acids and play an important role in detoxification. Besides aldehyde detoxification, many ALDH isozymes possess multiple additional catalytic and non-catalytic functions such as participating in metabolic pathways, or as binding proteins, or osmoregulants, to mention a few. The enzyme has three domains, a NAD(P)+ cofactor-binding domain, a catalytic domain, and a bridging domain; and the active enzyme is generally either homodimeric or homotetrameric. The catalytic mechanism is proposed to involve cofactor binding, resulting in a conformational change and activation of an invariant catalytic cysteine nucleophile. The cysteine and aldehyde substrate form an oxyanion thiohemiacetal intermediate resulting in hydride transfer to the cofactor and formation of a thioacylenzyme intermediate. Hydrolysis of the thioacylenzyme and release of the carboxylic acid product occurs, and in most cases, the reduced cofactor dissociates from the enzyme. The evolutionary phylogenetic tree of ALDHs appears to have an initial bifurcation between what has been characterized as the classical aldehyde dehydrogenases, the ALDH family (ALDH) and extended family members or aldehyde dehydrogenase-like (ALDH-L) proteins. The ALDH proteins are represented by enzymes which share a number of highly conserved residues necessary for catalysis and cofactor binding and they include such proteins as retinal dehydrogenase, 10-formyltetrahydrofolate dehydrogenase, non-phosphorylating glyceraldehyde 3-phosphate dehydrogenase, delta(1)-pyrroline-5-carboxylate dehydrogenases, alpha-ketoglutaric semialdehyde dehydrogenase, alpha-aminoadipic semialdehyde dehydrogenase, coniferyl aldehyde dehydrogenase and succinate-semialdehyde dehydrogenase. Included in this larger group are all human, Arabidopsis, Tortula, fungal, protozoan, and Drosophila ALDHs identified in families ALDH1 through ALDH22 with the exception of families ALDH18, ALDH19, and ALDH20 which are present in the ALDH-like group. The ALDH-like group is represented by such proteins as gamma-glutamyl phosphate reductase, LuxC-like acyl-CoA reductase, and coenzyme A acylating aldehyde dehydrogenase. All of these proteins have a conserved cysteine that aligns with the catalytic cysteine of the ALDH group. Length = 367 |
| >gnl|CDD|143413 cd07094, ALDH_F21_LactADH-like, ALDH subfamily: NAD+-dependent, lactaldehyde dehydrogenase, ALDH family 21 A1, and related proteins | Back alignment and domain information |
|---|
Score = 309 bits (794), Expect = e-102
Identities = 151/409 (36%), Positives = 233/409 (56%), Gaps = 13/409 (3%)
Query: 3 KFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKM--- 59
+ ADL+++ AE A + A + GK A+ ++ A +TLR A A++I GE + +
Sbjct: 51 RAADLLKKRAEEFAKIIACEGGKPIKDAR-VEVDRAIDTLRLAAEEAERIRGEEIPLDAT 109
Query: 60 --SRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYF 117
S +T+REP+GVV I P+NFP + K++PA+A GC +++KPA +TPL AL
Sbjct: 110 QGSDNRLAWTIREPVGVVLAITPFNFPLNLVAHKLAPAIATGCPVVLKPASKTPLSALEL 169
Query: 118 AHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKP 177
A + AGVP+GVL VV G G A A+ + +SFTGS VG + A K
Sbjct: 170 AKILVEAGVPEGVLQVVTGEREVLGDAFAADERVAMLSFTGSAAVGEALRANAG---GKR 226
Query: 178 VSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVE 237
++LELGG +P+++ D D++ A + G ++ G++C++ R+YV E +YDEF + V
Sbjct: 227 IALELGGNAPVIVDRDADLDAAIEALAKGGFYHAGQVCISVQRIYVHEELYDEFIEAFVA 286
Query: 238 KAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIGKKGYYIEPT 297
K VGDP D GP + ++ +R+ ++E GA LL GG+ G +PT
Sbjct: 287 AVKKLKVGDPLDEDTDVGPLISEEAAERVERWVEEAVEAGARLLCGGER---DGALFKPT 343
Query: 298 IFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVSR 357
+ +V D ++ E FGPV+ ++++ EEAI+ AN+T YGL AGI T+DLNVA +
Sbjct: 344 VLEDVPRDTKLSTEETFGPVVPIIRYDDFEEAIRIANSTDYGLQAGIFTRDLNVAFKAAE 403
Query: 358 SIRAGIIWINCYFAFDSD-CPYGGYKMSGFGRDCGLESLHNYLQVKSVV 405
+ G + +N AF +D P+GG K SG GR+ ++ + K+VV
Sbjct: 404 KLEVGGVMVNDSSAFRTDWMPFGGVKESGVGREGVPYAMEEMTEEKTVV 452
|
ALDH subfamily which includes Tortula ruralis aldehyde dehydrogenase ALDH21A1 (RNP123), and NAD+-dependent, lactaldehyde dehydrogenase (EC=1.2.1.22) and like sequences. Length = 453 |
| >gnl|CDD|183050 PRK11241, gabD, succinate-semialdehyde dehydrogenase I; Provisional | Back alignment and domain information |
|---|
Score = 309 bits (794), Expect = e-101
Identities = 157/398 (39%), Positives = 235/398 (59%), Gaps = 3/398 (0%)
Query: 6 DLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMSRALQG 65
+L+ EH + LA L L+ GK + AK G+I AA+ + ++A +I+G+ + +A +
Sbjct: 81 NLMMEHQDDLARLMTLEQGKPLAEAK-GEISYAASFIEWFAEEGKRIYGDTIPGHQADKR 139
Query: 66 Y-TLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLA 124
+++PIGV I PWNFP M K PALAAGCTM++KPA QTP AL A LA A
Sbjct: 140 LIVIKQPIGVTAAITPWNFPAAMITRKAGPALAAGCTMVLKPASQTPFSALALAELAIRA 199
Query: 125 GVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGG 184
G+P GV NVV G G + S+ + K+SFTGST++GRQ+M+ A ++K VSLELGG
Sbjct: 200 GIPAGVFNVVTGSAGAVGGELTSNPLVRKLSFTGSTEIGRQLMEQCA-KDIKKVSLELGG 258
Query: 185 KSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVV 244
+P ++FDD D++ A + AL N G+ CV ++R+YVQ+G+YD F +KL + +
Sbjct: 259 NAPFIVFDDADLDKAVEGALASKFRNAGQTCVCANRLYVQDGVYDRFAEKLQQAVSKLHI 318
Query: 245 GDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIGKKGYYIEPTIFTNVTE 304
GD + V GP +D+K ++ +I +GA ++ GGK G + +PTI +V
Sbjct: 319 GDGLEKGVTIGPLIDEKAVAKVEEHIADALEKGARVVCGGKAHELGGNFFQPTILVDVPA 378
Query: 305 DMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSIRAGII 364
+ +AK E FGP+ L +FK + I AN+T +GLAA +DL+ V ++ GI+
Sbjct: 379 NAKVAKEETFGPLAPLFRFKDEADVIAQANDTEFGLAAYFYARDLSRVFRVGEALEYGIV 438
Query: 365 WINCYFAFDSDCPYGGYKMSGFGRDCGLESLHNYLQVK 402
IN + P+GG K SG GR+ + +YL++K
Sbjct: 439 GINTGIISNEVAPFGGIKASGLGREGSKYGIEDYLEIK 476
|
Length = 482 |
| >gnl|CDD|143470 cd07152, ALDH_BenzADH, NAD-dependent benzaldehyde dehydrogenase II-like | Back alignment and domain information |
|---|
Score = 307 bits (789), Expect = e-101
Identities = 151/408 (37%), Positives = 223/408 (54%), Gaps = 19/408 (4%)
Query: 1 MLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMS 60
+ + ADL+EEHA+ +A ++G + A ++ A L AG + GE+L +
Sbjct: 41 LRRAADLLEEHADEIADWIVRESGSIRPKAG-FEVGAAIGELHEAAGLPTQPQGEILPSA 99
Query: 61 RALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTP-----LIAL 115
R P+GVVG I P+NFP + V+PALA G +++KP +TP +IA
Sbjct: 100 PGRLSLARRVPLGVVGVISPFNFPLILAMRSVAPALALGNAVVLKPDPRTPVSGGVVIAR 159
Query: 116 YFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNL 175
F AG+P GVL+V+PG G AG A+ ++ +SFTGST VGR+V +AA +L
Sbjct: 160 LFE----EAGLPAGVLHVLPG-GADAGEALVEDPNVAMISFTGSTAVGRKVGEAAG-RHL 213
Query: 176 KPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKL 235
K VSLELGGK+ L++ DD D++ AA G ++G+IC+A+ R V E + D + KL
Sbjct: 214 KKVSLELGGKNALIVLDDADLDLAASNGAWGAFLHQGQICMAAGRHLVHESVADAYTAKL 273
Query: 236 VEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIGKKGYYIE 295
KAK VGDP V GP ++ +Q DR+ + ++ GA L GG G +
Sbjct: 274 AAKAKHLPVGDPATGQVALGPLINARQLDRVHAIVDDSVAAGARLEAGGT---YDGLFYR 330
Query: 296 PTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTV 355
PT+ + V M EIFGPV + F + EEA+ AN+T YGL+AGI+++D+ A +
Sbjct: 331 PTVLSGVKPGMPAFDEEIFGPVAPVTVFDSDEEAVALANDTEYGLSAGIISRDVGRAMAL 390
Query: 356 SRSIRAGIIWINCYFAFDSDC--PYGGYKMSGFG-RDCGLESLHNYLQ 400
+ +R G++ IN D + P+GG SG G R G + + Q
Sbjct: 391 ADRLRTGMLHINDQTVND-EPHNPFGGMGASGNGSRFGGPANWEEFTQ 437
|
NAD-dependent, benzaldehyde dehydrogenase II (XylC, BenzADH, EC=1.2.1.28) is involved in the oxidation of benzyl alcohol to benzoate. In Acinetobacter calcoaceticus, this process is carried out by the chromosomally encoded, benzyl alcohol dehydrogenase (xylB) and benzaldehyde dehydrogenase II (xylC) enzymes; whereas in Pseudomonas putida they are encoded by TOL plasmids. Length = 443 |
| >gnl|CDD|143465 cd07147, ALDH_F21_RNP123, Aldehyde dehydrogenase family 21A1-like | Back alignment and domain information |
|---|
Score = 305 bits (784), Expect = e-100
Identities = 144/395 (36%), Positives = 210/395 (53%), Gaps = 16/395 (4%)
Query: 1 MLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKM- 59
+L +EE E LA L+AGK A+ G++ A +T R A A +I+GEVL +
Sbjct: 49 LLHCVARLEERFEELAETIVLEAGKPIKDAR-GEVARAIDTFRIAAEEATRIYGEVLPLD 107
Query: 60 ----SRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIAL 115
QG R PIG V I P+NFP + KV+PA+AAGC ++KPA +TPL AL
Sbjct: 108 ISARGEGRQGLVRRFPIGPVSAITPFNFPLNLVAHKVAPAIAAGCPFVLKPASRTPLSAL 167
Query: 116 YFAHLAKLAGVPDGVLNVVPGFGPTAGAAI-ASHMDIDKVSFTGSTDVGRQVMQAAATSN 174
+ G+P G +V+P A + + I +SFTGS VG + A
Sbjct: 168 ILGEVLAETGLPKGAFSVLPC--SRDDADLLVTDERIKLLSFTGSPAVGWDLKARAGK-- 223
Query: 175 LKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKK 234
K V LELGG + +++ D D++ AA + G + G+ C++ RV V +YDEF+ +
Sbjct: 224 -KKVVLELGGNAAVIVDSDADLDFAAQRIIFGAFYQAGQSCISVQRVLVHRSVYDEFKSR 282
Query: 235 LVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIGKKGYYI 294
LV + KA GDP D A GP + + + +R+ ++ GA LLTGGK + G +
Sbjct: 283 LVARVKALKTGDPKDDATDVGPMISESEAERVEGWVNEAVDAGAKLLTGGK---RDGALL 339
Query: 295 EPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANT 354
EPTI +V DM + E+FGPV+ + + +EA+ + N++++GL AG+ T+DL A
Sbjct: 340 EPTILEDVPPDMEVNCEEVFGPVVTVEPYDDFDEALAAVNDSKFGLQAGVFTRDLEKALR 399
Query: 355 VSRSIRAGIIWINCYFAFDSD-CPYGGYKMSGFGR 388
+ G + IN F D PYGG K SG GR
Sbjct: 400 AWDELEVGGVVINDVPTFRVDHMPYGGVKDSGIGR 434
|
Aldehyde dehydrogenase ALDH21A1 (gene name RNP123) was first described in the moss Tortula ruralis and is believed to play an important role in the detoxification of aldehydes generated in response to desiccation- and salinity-stress, and ALDH21A1 expression represents a unique stress tolerance mechanism. So far, of plants, only the bryophyte sequence has been observed, but similar protein sequences from bacteria and archaea are also present in this CD. Length = 452 |
| >gnl|CDD|132417 TIGR03374, ABALDH, 1-pyrroline dehydrogenase | Back alignment and domain information |
|---|
Score = 304 bits (779), Expect = 2e-99
Identities = 151/409 (36%), Positives = 232/409 (56%), Gaps = 8/409 (1%)
Query: 1 MLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMS 60
+LK AD+IEE+A+V A LE+ + GK +IP + R++AGAA + G L
Sbjct: 66 LLKLADVIEENAQVFAELESRNCGKPLHSVFNDEIPAIVDVFRFFAGAARCLSG--LAAG 123
Query: 61 RALQGYT---LREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYF 117
L+G+T R+P+GVV I PWN+P M K++PALAAG +++KP+E TPL AL
Sbjct: 124 EYLEGHTSMIRRDPLGVVASIAPWNYPLMMAAWKLAPALAAGNCVVLKPSEITPLTALKL 183
Query: 118 AHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKP 177
A LAK P GV+N++ G G T G + H + VS TGS G ++ A S +K
Sbjct: 184 AELAKDI-FPAGVVNILFGRGKTVGDPLTGHEKVRMVSLTGSIATGEHILSHTAPS-IKR 241
Query: 178 VSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVE 237
+ELGGK+P+++FDD D++ + +N G+ C A+ R+Y Q GIYD +KL
Sbjct: 242 THMELGGKAPVIVFDDADIDAVVEGVRTFGFYNAGQDCTAACRIYAQRGIYDTLVEKLGA 301
Query: 238 KAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREG-ATLLTGGKPIGKKGYYIEP 296
G P D + GP +R++ +E K G ++TGG+ GYY P
Sbjct: 302 AVATLKSGAPDDESTELGPLSSLAHLERVMKAVEEAKALGHIKVITGGEKRKGNGYYFAP 361
Query: 297 TIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVS 356
T+ +D I + E+FGPV+++ F E+ + AN+++YGLA+ + TKD+ A+ +S
Sbjct: 362 TLLAGAKQDDAIVQKEVFGPVVSITSFDDEEQVVNWANDSQYGLASSVWTKDVGRAHRLS 421
Query: 357 RSIRAGIIWINCYFAFDSDCPYGGYKMSGFGRDCGLESLHNYLQVKSVV 405
++ G W+N +F S+ P+GG K+SG+G+D L L +Y V+ ++
Sbjct: 422 ARLQYGCTWVNTHFMLVSEMPHGGQKLSGYGKDMSLYGLEDYTVVRHIM 470
|
Members of this protein family are 1-pyrroline dehydrogenase (1.5.1.35), also called gamma-aminobutyraldehyde dehydrogenase. This enzyme can follow putrescine transaminase (EC 2.6.1.82) for a two-step conversion of putrescine to gamma-aminobutyric acid (GABA). The member from Escherichia coli is characterized as a homotetramer that binds one NADH per momomer. This enzyme belongs to the medium-chain aldehyde dehydrogenases, and is quite similar in sequence to the betaine aldehyde dehydrogenase (EC 1.2.1.8) family. Length = 472 |
| >gnl|CDD|182233 PRK10090, PRK10090, aldehyde dehydrogenase A; Provisional | Back alignment and domain information |
|---|
Score = 299 bits (767), Expect = 2e-98
Identities = 145/411 (35%), Positives = 226/411 (54%), Gaps = 14/411 (3%)
Query: 1 MLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMS 60
+ K A I E A ++ L + GK+ A++ ++ A+ + Y A A + GE+++
Sbjct: 1 LRKIAAGIRERASEISALIVEEGGKIQQLAEV-EVAFTADYIDYMAEWARRYEGEIIQSD 59
Query: 61 RALQG-YTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAH 119
R + + +GV I+PWNFP + K++PAL G T+++KP+E TP A+ FA
Sbjct: 60 RPGENILLFKRALGVTTGILPWNFPFFLIARKMAPALLTGNTIVIKPSEFTPNNAIAFAK 119
Query: 120 LAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVS 179
+ G+P GV N+V G G T G +A + + VS TGS G ++M AAA N+ V
Sbjct: 120 IVDEIGLPKGVFNLVLGRGETVGQELAGNPKVAMVSMTGSVSAGEKIMAAAA-KNITKVC 178
Query: 180 LELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKA 239
LELGGK+P ++ DD D++ A + + N G++C + RVYVQ+GIYD+F +L E
Sbjct: 179 LELGGKAPAIVMDDADLDLAVKAIVDSRVINSGQVCNCAERVYVQKGIYDQFVNRLGEAM 238
Query: 240 KAWVVGDPFD-PAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIGKKGYYIEPTI 298
+A G+P + + GP ++ +R+ + EGA + GGK + KGYY PT+
Sbjct: 239 QAVQFGNPAERNDIAMGPLINAAALERVEQKVARAVEEGARVALGGKAVEGKGYYYPPTL 298
Query: 299 FTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRS 358
+V ++M I E FGPV+ ++ F T+EEAI AN++ YGL + I T++LNVA +
Sbjct: 299 LLDVRQEMSIMHEETFGPVLPVVAFDTLEEAIAMANDSDYGLTSSIYTQNLNVAMKAIKG 358
Query: 359 IRAGIIWIN-----CYFAFDSDCPYGGYKMSGFGRDCGLESLHNYLQVKSV 404
++ G +IN F + G++ SG G G LH YLQ + V
Sbjct: 359 LKFGETYINRENFEAMQGF-----HAGWRKSGIGGADGKHGLHEYLQTQVV 404
|
Length = 409 |
| >gnl|CDD|143464 cd07146, ALDH_PhpJ, Streptomyces putative phosphonoformaldehyde dehydrogenase PhpJ-like | Back alignment and domain information |
|---|
Score = 293 bits (752), Expect = 1e-95
Identities = 148/412 (35%), Positives = 225/412 (54%), Gaps = 14/412 (3%)
Query: 1 MLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKM- 59
+ K A L+E E A L L++G ++ AA+ LR+ A A + GE
Sbjct: 46 LNKAAALLEARREEFARLITLESGLCLKDT-RYEVGRAADVLRFAAAEALRDDGESFSCD 104
Query: 60 ----SRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIAL 115
+A + +TLREP+GVV I P+N P K++PA+AA +++KP+E+TPL A+
Sbjct: 105 LTANGKARKIFTLREPLGVVLAITPFNHPLNQVAHKIAPAIAANNRIVLKPSEKTPLSAI 164
Query: 116 YFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNL 175
Y A L AG+P +L+VV G G + +H D+D V+FTG VG+ + AAT+
Sbjct: 165 YLADLLYEAGLPPDMLSVVTGEPGEIGDELITHPDVDLVTFTGGVAVGKAI---AATAGY 221
Query: 176 KPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKL 235
K LELGG PL++ DD D+ AA +A+ G N G+ C A R+ V E + DEF L
Sbjct: 222 KRQLLELGGNDPLIVMDDADLERAATLAVAGSYANSGQRCTAVKRILVHESVADEFVDLL 281
Query: 236 VEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIGKKGYYIE 295
VEK+ A VVGDP DPA G +D++ +I + +E +GA +L G ++G
Sbjct: 282 VEKSAALVVGDPMDPATDMGTVIDEEAAIQIENRVEEAIAQGARVLLGN---QRQGALYA 338
Query: 296 PTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTV 355
PT+ +V D + E FGPV +++ K ++EAI +N+T YGL++G+ T DL+ +
Sbjct: 339 PTVLDHVPPDAELVTEETFGPVAPVIRVKDLDEAIAISNSTAYGLSSGVCTNDLDTIKRL 398
Query: 356 SRSIRAGIIWINCYFAFDSD-CPYGGYKMSGFG-RDCGLESLHNYLQVKSVV 405
+ G + +N F S+ P+GG K SG G ++ E++ VK+
Sbjct: 399 VERLDVGTVNVNEVPGFRSELSPFGGVKDSGLGGKEGVREAMKEMTNVKTYS 450
|
Putative phosphonoformaldehyde dehydrogenase (PhpJ), an aldehyde dehydrogenase homolog reportedly involved in the biosynthesis of phosphinothricin tripeptides in Streptomyces viridochromogenes DSM 40736, and similar sequences are included in this CD. Length = 451 |
| >gnl|CDD|143420 cd07102, ALDH_EDX86601, Uncharacterized aldehyde dehydrogenase of Synechococcus sp | Back alignment and domain information |
|---|
Score = 291 bits (748), Expect = 5e-95
Identities = 143/415 (34%), Positives = 202/415 (48%), Gaps = 21/415 (5%)
Query: 1 MLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMS 60
+ + +L+ + + +A G+ + A G+I G RY A+ E L
Sbjct: 46 VTRAVELLAANTDEIAEELTWQMGRPIAQAG-GEIRGMLERARYMISIAE----EALADI 100
Query: 61 RA-----LQGYTLREPIGVVGHIIPWNFPTTMFFMKVS---PALAAGCTMIVKPAEQTPL 112
R + Y REP+GVV I PWN+P + V+ PAL AG +I+K + QTPL
Sbjct: 101 RVPEKDGFERYIRREPLGVVLIIAPWNYP---YLTAVNAVIPALLAGNAVILKHSPQTPL 157
Query: 113 IALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAAT 172
FA AG+P+GV V+ T+ A IA ID VSFTGS GR + +AAA
Sbjct: 158 CGERFAAAFAEAGLPEGVFQVLHLSHETSAALIADP-RIDHVSFTGSVAGGRAIQRAAA- 215
Query: 173 SNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFE 232
V LELGGK P + D D++ AA+ + G FN G+ C + R+YV E IYD F
Sbjct: 216 GRFIKVGLELGGKDPAYVRPDADLDAAAESLVDGAFFNSGQSCCSIERIYVHESIYDAFV 275
Query: 233 KKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGK--PIGK- 289
+ V K + +GDP DP+ GP V + D + + I +GA L G P K
Sbjct: 276 EAFVAVVKGYKLGDPLDPSTTLGPVVSARAADFVRAQIADAIAKGARALIDGALFPEDKA 335
Query: 290 KGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDL 349
G Y+ PT+ TNV M + + E FGPV+ +MK K+ EAI N++ YGL A + TKD+
Sbjct: 336 GGAYLAPTVLTNVDHSMRVMREETFGPVVGIMKVKSDAEAIALMNDSEYGLTASVWTKDI 395
Query: 350 NVANTVSRSIRAGIIWINCYFAFDSDCPYGGYKMSGFGRDCGLESLHNYLQVKSV 404
A + + G +++N D + G K SG G + KS
Sbjct: 396 ARAEALGEQLETGTVFMNRCDYLDPALAWTGVKDSGRGVTLSRLGYDQLTRPKSY 450
|
PCC 7335 (EDX86601). Uncharacterized aldehyde dehydrogenase of Synechococcus sp. PCC 7335 (locus EDX86601) and other similar sequences, are present in this CD. Length = 452 |
| >gnl|CDD|143401 cd07082, ALDH_F11_NP-GAPDH, NADP+-dependent non-phosphorylating glyceraldehyde 3-phosphate dehydrogenase and ALDH family 11 | Back alignment and domain information |
|---|
Score = 291 bits (748), Expect = 1e-94
Identities = 142/414 (34%), Positives = 213/414 (51%), Gaps = 16/414 (3%)
Query: 1 MLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKM- 59
+ KFADL++E+ E +A L + GK A + ++ + +R ++ G+ L
Sbjct: 67 LHKFADLLKENKEEVANLLMWEIGKTLKDA-LKEVDRTIDYIRDTIEELKRLDGDSLPGD 125
Query: 60 ----SRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIAL 115
++ REP+GVV I P+N+P + K+ PAL G T++ KPA Q L+ +
Sbjct: 126 WFPGTKGKIAQVRREPLGVVLAIGPFNYPLNLTVSKLIPALIMGNTVVFKPATQGVLLGI 185
Query: 116 YFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNL 175
A AG P GV+NVV G G G + +H ID +SFTGST+VG ++ + +
Sbjct: 186 PLAEAFHDAGFPKGVVNVVTGRGREIGDPLVTHGRIDVISFTGSTEVGNRLKKQHP---M 242
Query: 176 KPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKL 235
K + LELGGK P ++ D D+ AA + G L G+ C A RV V E + DE + L
Sbjct: 243 KRLVLELGGKDPAIVLPDADLELAAKEIVKGALSYSGQRCTAIKRVLVHESVADELVELL 302
Query: 236 VEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIGKKGYYIE 295
E+ VG P+D V P +D K D + I+ +GAT+L GG + G I
Sbjct: 303 KEEVAKLKVGMPWDNGVDITPLIDPKSADFVEGLIDDAVAKGATVLNGGG--REGGNLIY 360
Query: 296 PTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTV 355
PT+ VT DM +A E FGPV+ +++ +EEAI+ AN + YGL A I TKD+N A +
Sbjct: 361 PTLLDPVTPDMRLAWEEPFGPVLPIIRVNDIEEAIELANKSNYGLQASIFTKDINKARKL 420
Query: 356 SRSIRAGIIWINCYFAFDSDC-PYGGYKMSGFGRDCGLESLHNYLQVKSVVTPI 408
+ ++ G + IN D P+ G K SG G + + + L+ + I
Sbjct: 421 ADALEVGTVNINSKCQRGPDHFPFLGRKDSGIGT----QGIGDALRSMTRRKGI 470
|
NADP+-dependent non-phosphorylating glyceraldehyde 3-phosphate dehydrogenase (NP-GAPDH, EC=1.2.1.9) catalyzes the irreversible oxidation of glyceraldehyde 3-phosphate to 3-phosphoglycerate generating NADPH for biosynthetic reactions. This CD also includes the Arabidopsis thaliana osmotic-stress-inducible ALDH family 11, ALDH11A3 and similar sequences. In autotrophic eukaryotes, NP-GAPDH generates NADPH for biosynthetic processes from photosynthetic glyceraldehyde-3-phosphate exported from the chloroplast and catalyzes one of the classic glycolytic bypass reactions unique to plants. Length = 473 |
| >gnl|CDD|143404 cd07085, ALDH_F6_MMSDH, Methylmalonate semialdehyde dehydrogenase and ALDH family members 6A1 and 6B2 | Back alignment and domain information |
|---|
Score = 289 bits (741), Expect = 2e-93
Identities = 155/422 (36%), Positives = 220/422 (52%), Gaps = 27/422 (6%)
Query: 1 MLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLK-M 59
M KF L+EE+ + LA L L+ GK + A+ GD+ + + + GE L+ +
Sbjct: 66 MFKFRQLLEENLDELARLITLEHGKTLADAR-GDVLRGLEVVEFACSIPHLLKGEYLENV 124
Query: 60 SRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAH 119
+R + Y+ R+P+GVV I P+NFP + A+A G T ++KP+E+ P A+ A
Sbjct: 125 ARGIDTYSYRQPLGVVAGITPFNFPAMIPLWMFPMAIACGNTFVLKPSERVPGAAMRLAE 184
Query: 120 LAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVS 179
L + AG+PDGVLNVV G G A A+ H DI VSF GST VG + A +N K V
Sbjct: 185 LLQEAGLPDGVLNVVHG-GKEAVNALLDHPDIKAVSFVGSTPVGEYI-YERAAANGKRVQ 242
Query: 180 LELGGKSPLLIFDDVDVNTAADMALLGILF-NKGEICVASSRVYVQEGIYDEFEKKLVEK 238
G K+ ++ D D+ A+ AL+G F G+ C+A S DE+ KLVE+
Sbjct: 243 ALGGAKNHAVVMPDADLEQTAN-ALVGAAFGAAGQRCMALSVAVAVGDEADEWIPKLVER 301
Query: 239 AKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGK----PIGKKGYYI 294
AK VG DP GP + +RI IE G EGA L+ G+ P + G ++
Sbjct: 302 AKKLKVGAGDDPGADMGPVISPAAKERIEGLIESGVEEGAKLVLDGRGVKVPGYENGNFV 361
Query: 295 EPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANT 354
PTI NVT DM I K EIFGPV+++++ T++EAI N YG A I T+ A
Sbjct: 362 GPTILDNVTPDMKIYKEEIFGPVLSIVRVDTLDEAIAIINANPYGNGAAIFTRSGAAARK 421
Query: 355 VSRSIRAGIIWINC-------YFAFDSDCPYGGYKMSGFGRDC---GLESLHNYLQVKSV 404
R + AG++ IN +F+F GG+K S FG D G + + Y Q K+V
Sbjct: 422 FQREVDAGMVGINVPIPVPLAFFSF------GGWKGSFFG-DLHFYGKDGVRFYTQTKTV 474
Query: 405 VT 406
+
Sbjct: 475 TS 476
|
Methylmalonate semialdehyde dehydrogenase (MMSDH, EC=1.2.1.27) [acylating] from Bacillus subtilis is involved in valine metabolism and catalyses the NAD+- and CoA-dependent oxidation of methylmalonate semialdehyde into propionyl-CoA. Mitochondrial human MMSDH ALDH6A1 and Arabidopsis MMSDH ALDH6B2 are also present in this CD. Length = 478 |
| >gnl|CDD|143416 cd07098, ALDH_F15-22, Aldehyde dehydrogenase family 15A1 and 22A1-like | Back alignment and domain information |
|---|
Score = 280 bits (719), Expect = 2e-90
Identities = 144/425 (33%), Positives = 211/425 (49%), Gaps = 36/425 (8%)
Query: 6 DLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMSRALQ- 64
I E+ E + + D GK A +G+I +R+ HGE +AL+
Sbjct: 51 KYILENQEEICRVACRDTGKTMVDASLGEILVTCEKIRWTLK-----HGE-----KALRP 100
Query: 65 -------------GYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTP 111
EP+GVVG I+ WN+P + AL AG ++VK +EQ
Sbjct: 101 ESRPGGLLMFYKRARVEYEPLGVVGAIVSWNYPFHNLLGPIIAALFAGNAIVVKVSEQVA 160
Query: 112 LIALYFAHLAKLA----GVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVM 167
+ +F + + G ++ +V T A+ SH ID ++F GS VG++VM
Sbjct: 161 WSSGFFLSIIRECLAACGHDPDLVQLVTCLPET-AEALTSHPVIDHITFIGSPPVGKKVM 219
Query: 168 QAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGI 227
AAA S L PV LELGGK P ++ DD D++ A + + G + G+ C+ RV V E I
Sbjct: 220 AAAAES-LTPVVLELGGKDPAIVLDDADLDQIASIIMRGTFQSSGQNCIGIERVIVHEKI 278
Query: 228 YDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGK-- 285
YD+ + L ++ +A G P D V G + +FDR+ + +GA LL GGK
Sbjct: 279 YDKLLEILTDRVQALRQGPPLDGDVDVGAMISPARFDRLEELVADAVEKGARLLAGGKRY 338
Query: 286 --PIGKKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAG 343
P +G+Y PT+ +VT DM IA+ E+FGPVM +MK EEA++ AN+T YGL A
Sbjct: 339 PHPEYPQGHYFPPTLLVDVTPDMKIAQEEVFGPVMVVMKASDDEEAVEIANSTEYGLGAS 398
Query: 344 IMTKDLNVANTVSRSIRAGIIWINCY--FAFDSDCPYGGYKMSGFGRDCGLESLHNYLQV 401
+ KD+ A ++ + G++ IN + + P+GG K SGFGR G E L
Sbjct: 399 VFGKDIKRARRIASQLETGMVAINDFGVNYYVQQLPFGGVKGSGFGRFAGEEGLRGLCNP 458
Query: 402 KSVVT 406
KSV
Sbjct: 459 KSVTE 463
|
Aldehyde dehydrogenase family members ALDH15A1 (Saccharomyces cerevisiae YHR039C) and ALDH22A1 (Arabidopsis thaliana, EC=1.2.1.3), and similar sequences, are in this CD. Significant improvement of stress tolerance in tobacco plants was observed by overexpressing the ALDH22A1 gene from maize (Zea mays) and was accompanied by a reduction of malondialdehyde derived from cellular lipid peroxidation. Length = 465 |
| >gnl|CDD|179543 PRK03137, PRK03137, 1-pyrroline-5-carboxylate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 276 bits (709), Expect = 2e-88
Identities = 150/416 (36%), Positives = 220/416 (52%), Gaps = 18/416 (4%)
Query: 1 MLKFADLIEEHAEVLAVLEALDAGKLHSWAKM-GDIPGAANTLRYYAGAADKI-HGE-VL 57
+L+ A +I + +AGK WA+ D A + L YYA K+ G+ V
Sbjct: 101 LLRAAAIIRRRKHEFSAWLVKEAGK--PWAEADADTAEAIDFLEYYARQMLKLADGKPVE 158
Query: 58 KMSRALQGYTLREPIGVVGHIIPWNFPTT-MFFMKVSPALAAGCTMIVKPAEQTPLIALY 116
Y P+GV I PWNFP M M ++ + AG T+++KPA TP+IA
Sbjct: 159 SRPGEHNRY-FYIPLGVGVVISPWNFPFAIMAGMTLAA-IVAGNTVLLKPASDTPVIAAK 216
Query: 117 FAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSN-- 174
F + + AG+P GV+N VPG G G + H ++FTGS +VG ++ + AA
Sbjct: 217 FVEVLEEAGLPAGVVNFVPGSGSEVGDYLVDHPKTRFITFTGSREVGLRIYERAAKVQPG 276
Query: 175 ---LKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEF 231
LK V E+GGK +++ +D D++ AA+ + G+ C A SR V E +YDE
Sbjct: 277 QIWLKRVIAEMGGKDAIVVDEDADLDLAAESIVASAFGFSGQKCSACSRAIVHEDVYDEV 336
Query: 232 EKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIGKKG 291
+K+VE K VG+P D A GP +++ FD+I+SYIE GK EG L+ GG+ KG
Sbjct: 337 LEKVVELTKELTVGNPEDNAY-MGPVINQASFDKIMSYIEIGKEEG-RLVLGGEGDDSKG 394
Query: 292 YYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNV 351
Y+I+PTIF +V I + EIFGPV+A +K K + A++ ANNT YGL +++ +
Sbjct: 395 YFIQPTIFADVDPKARIMQEEIFGPVVAFIKAKDFDHALEIANNTEYGLTGAVISNNREH 454
Query: 352 ANTVSRSIRAGIIWIN--CYFAFDSDCPYGGYKMSGF-GRDCGLESLHNYLQVKSV 404
R G ++ N C A P+GG+ MSG + G + L +LQ K+V
Sbjct: 455 LEKARREFHVGNLYFNRGCTGAIVGYHPFGGFNMSGTDSKAGGPDYLLLFLQAKTV 510
|
Length = 514 |
| >gnl|CDD|212007 TIGR04284, aldehy_Rv0768, aldehyde dehydrogenase, Rv0768 family | Back alignment and domain information |
|---|
Score = 275 bits (705), Expect = 4e-88
Identities = 141/413 (34%), Positives = 208/413 (50%), Gaps = 15/413 (3%)
Query: 6 DLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIH-----GEVLKMS 60
D + H E L L + G + G + L + A A+ G M
Sbjct: 71 DALRAHVEELRELTIAEVGAPRMLTAGAQLEGPVDDLGFAADLAESYAWTTDLGVASPMG 130
Query: 61 RALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHL 120
+ RE +GVVG I PWNFP + K+ PALAAG T+++KPA TP A A L
Sbjct: 131 IPTRRTLRREAVGVVGAITPWNFPHQINLAKLGPALAAGNTVVLKPAPDTPWCA---AVL 187
Query: 121 AKLAG----VPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLK 176
+L P GV+N+V GA +A +D VSFTGST GR VM AA + LK
Sbjct: 188 GELIAEHTDFPPGVVNIVTSSDHRLGALLAKDPRVDMVSFTGSTATGRAVMADAAAT-LK 246
Query: 177 PVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLV 236
V LELGGKS ++ DD D+ A MA + + G+ C ++R+ V YDE
Sbjct: 247 KVFLELGGKSAFIVLDDADLAAACSMAAFTVCMHAGQGCAITTRLVVPRARYDEAVAAAA 306
Query: 237 EKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGG-KPIGK-KGYYI 294
+ GDP DP GP + +Q DR+ SY++ EG GG +P + +G+++
Sbjct: 307 ATMGSIKPGDPADPGTVCGPVISARQRDRVQSYLDLAVAEGGRFACGGGRPADRDRGFFV 366
Query: 295 EPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANT 354
EPT+ + + +A+ EIFGPV+ ++ ++A++ AN++ YGL+ + D A
Sbjct: 367 EPTVIAGLDNNARVAREEIFGPVLTVIAHDGDDDAVRIANDSPYGLSGTVFGADPERAAA 426
Query: 355 VSRSIRAGIIWINCYFAFDSDCPYGGYKMSGFGRDCGLESLHNYLQVKSVVTP 407
V+ +R G + +N + +D P+GGYK SG GR+ G+ YL+ K + T
Sbjct: 427 VAARVRTGTVNVNGGVWYSADAPFGGYKQSGIGREMGVAGFEEYLETKLIATA 479
|
This family describes a branch of the aldehyde dehydrogenase (NAD) family (see pfam00171) that includes Rv0768 from Mycobacterium tuberculosis. All members of this family belong to species predicted to synthesize mycofactocin, suggesting that this enzyme or another upstream or downstream in the same pathway might be mycofactocin-dependent. However, the taxonomic range of this family is not nearly broad enough to make that relationship conclusive [Unknown function, Enzymes of unknown specificity]. Length = 480 |
| >gnl|CDD|200087 TIGR01237, D1pyr5carbox2, delta-1-pyrroline-5-carboxylate dehydrogenase, group 2, putative | Back alignment and domain information |
|---|
Score = 262 bits (671), Expect = 7e-83
Identities = 136/414 (32%), Positives = 209/414 (50%), Gaps = 13/414 (3%)
Query: 1 MLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKI--HGEVLK 58
+ K A ++ + L + GK + A ++ A + + YYA ++ V
Sbjct: 97 LFKAAAIVRRRRHEFSALLVKEVGKPWNEADA-EVAEAIDFMEYYARQMIELAKGKPVNS 155
Query: 59 MSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFA 118
Y + P GV I PWNFP + + G +++KPAE P+IA F
Sbjct: 156 REGETNQY-VYTPTGVTVVISPWNFPFAIMVGMTVAPIVTGNCVVLKPAEAAPVIAAKFV 214
Query: 119 HLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAA-----TS 173
+ + AG+P GV+ VPG G G + H ++FTGS +VG ++ + AA
Sbjct: 215 EILEEAGLPKGVVQFVPGSGSEVGDYLVDHPKTSLITFTGSREVGTRIFERAAKVQPGQK 274
Query: 174 NLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEK 233
+LK V E+GGK +++ +D D+ AA A G+ C A SR V E +YDE +
Sbjct: 275 HLKRVIAEMGGKDTVIVDEDADIELAAQSAFTSAFGFAGQKCSAGSRAVVHEKVYDEVVE 334
Query: 234 KLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIGKKGYY 293
+ VE ++ VG P V GP +D+K F++I+ YIE GK EG L++GG KGY+
Sbjct: 335 RFVEITESLKVGPPDSADVYVGPVIDQKSFNKIMEYIEIGKAEG-RLVSGGCGDDSKGYF 393
Query: 294 IEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVAN 353
I PTIF +V +A+ EIFGPV+A ++ +EA++ ANNT YGL G+++ + + N
Sbjct: 394 IGPTIFADVDRKARLAQEEIFGPVVAFIRASDFDEALEIANNTEYGLTGGVISNNRDHIN 453
Query: 354 TVSRSIRAGIIWIN--CYFAFDSDCPYGGYKMSGFGRDC-GLESLHNYLQVKSV 404
G ++ N A P+GG+KMSG G + L ++Q K+V
Sbjct: 454 RAKAEFEVGNLYFNRNITGAIVGYQPFGGFKMSGTDSKAGGPDYLALFMQAKTV 507
|
This enzyme is the second of two in the degradation of proline to glutamate. This model represents one of several related branches of delta-1-pyrroline-5-carboxylate dehydrogenase. Members of this branch may be associated with proline dehydrogenase (the other enzyme of the pathway from proline to glutamate) but have not been demonstrated experimentally. The branches are not as closely related to each other as some distinct aldehyde dehydrogenases are to some; separate models were built to let each model describe a set of equivalogs [Energy metabolism, Amino acids and amines]. Length = 511 |
| >gnl|CDD|132294 TIGR03250, PhnAcAld_DH, putative phosphonoacetaldehyde dehydrogenase | Back alignment and domain information |
|---|
Score = 233 bits (597), Expect = 2e-72
Identities = 132/422 (31%), Positives = 219/422 (51%), Gaps = 22/422 (5%)
Query: 1 MLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMS 60
+ + A L+ E ++ L L++G L + ++ A+ L + A A + G++
Sbjct: 64 LDRAAALLAARKEEISDLITLESG-LSKKDSLYEVGRVADVLTFAAAEALRDDGQIFSCD 122
Query: 61 RALQG-----YTLREPI-GVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIA 114
G +T REP+ GV+ I P+N P K++PA+A M+VKP+E+TPL A
Sbjct: 123 LTPHGKARKVFTQREPLLGVISAITPFNHPMNQVAHKIAPAIATNNRMVVKPSEKTPLSA 182
Query: 115 LYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSN 174
LY A + AG+P +L VV G + ++ +D V+FTG +G+ + AA +
Sbjct: 183 LYLADILYEAGLPPQMLQVVTGDPREIADELITNPHVDLVTFTGGVAIGKYI---AARAG 239
Query: 175 LKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKK 234
+ LELGG PL++ +D D++ AAD+A+ G N G+ C A R+ VQE + D F +
Sbjct: 240 YRRQVLELGGNDPLIVMEDADLDRAADLAVKGSYKNSGQRCTAVKRMLVQESVADRFTEL 299
Query: 235 LVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIGKKGYYI 294
LVEK +AW GDP DP+V G +D+ + + +GA LL G + G
Sbjct: 300 LVEKTRAWRYGDPMDPSVDMGTVIDEAAAILFEARVNEAIAQGARLLLGN---VRDGALY 356
Query: 295 EPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANT 354
PT+ V M + + E FGPV +++F +++AI+ +N+T YGL++G+ T L+
Sbjct: 357 APTVLDRVDPSMTLVREETFGPVSPVIRFCDIDDAIRISNSTAYGLSSGVCTNRLDYITR 416
Query: 355 VSRSIRAGI--IWINCYFAFDSDCPYGGYKMSGFGRDCG-LESLHNYLQVKSVVTPIFNS 411
++ G +W + + P+GG K SG G G E++ ++ +K+ ++
Sbjct: 417 FIAELQVGTVNVWEVPGYRLELT-PFGGIKDSGLGYKEGVQEAMKSFTNLKT-----YSL 470
Query: 412 PW 413
PW
Sbjct: 471 PW 472
|
This family of genes are members of the pfam00171 NAD-dependent aldehyde dehydrogenase family. These genes are observed in Ralstonia eutropha JMP134, Sinorhizobium meliloti 1021, Burkholderia mallei ATCC 23344, Burkholderia thailandensis E264, Burkholderia cenocepacia AU 1054, Burkholderia pseudomallei K96243 and 1710b, Burkholderia xenovorans LB400, Burkholderia sp. 383 and Polaromonas sp. JS666 in close proximity to the PhnW gene (TIGR02326) encoding 2-aminoethyl phosphonate aminotransferase (which generates phosphonoacetaldehyde) and PhnA (TIGR02335) encoding phosphonoacetate hydrolase (not to be confused with the alkylphosphonate utilization operon protein PhnA modeled by TIGR00686). Additionally, transporters believed to be specific for 2-aminoethyl phosphonate are often present. PhnW is, in other organisms, coupled with PhnX (TIGR01422) for the degradation of phosphonoacetaldehyde (GenProp0238), but PhnX is apparently absent in each of the organisms containing this aldehyde reductase. PhnA, characterized in a strain of Pseudomonas fluorescens that has not het been genome sequenced, is only rarely found outside of the PhnW and aldehyde dehydrogenase context. For instance in Rhodopseudomonas and Bordetella bronchiseptica, where it is adjacent to transporters presumably specific for the import of phosphonoacetate. It seems reasonably certain then, that this enzyme catalyzes the NAD-dependent oxidation of phosphonoacetaldehyde to phosphonoacetate, bridging the metabolic gap between PhnW and PhnA. We propose the name phosphonoacetaldehyde dehydrogenase and the gene symbol PhnY for this enzyme. Length = 472 |
| >gnl|CDD|181826 PRK09406, gabD1, succinic semialdehyde dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Score = 225 bits (575), Expect = 4e-69
Identities = 136/412 (33%), Positives = 200/412 (48%), Gaps = 16/412 (3%)
Query: 1 MLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVL--- 57
ADL+E A+ +A L L+ GK + AK + A RYYA H E L
Sbjct: 51 ANAAADLLEAEADQVAALMTLEMGKTLASAK-AEALKCAKGFRYYAE-----HAEALLAD 104
Query: 58 -----KMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPL 112
A + Y +P+GVV ++PWNFP +PAL AG ++K A P
Sbjct: 105 EPADAAAVGASRAYVRYQPLGVVLAVMPWNFPLWQVVRFAAPALMAGNVGLLKHASNVPQ 164
Query: 113 IALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAAT 172
ALY A L + AG PDG + G A AI + + TGS GR V A
Sbjct: 165 TALYLADLFRRAGFPDGCFQTLL-VGSGAVEAILRDPRVAAATLTGSEPAGRAVAAIAG- 222
Query: 173 SNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFE 232
+K LELGG P ++ D++ AA+ A+ + N G+ C+A+ R V +YD F
Sbjct: 223 DEIKKTVLELGGSDPFIVMPSADLDRAAETAVTARVQNNGQSCIAAKRFIVHADVYDAFA 282
Query: 233 KKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIGKKGY 292
+K V + A VGDP DP GP ++ D + ++ GAT+L GGK G+
Sbjct: 283 EKFVARMAALRVGDPTDPDTDVGPLATEQGRDEVEKQVDDAVAAGATILCGGKRPDGPGW 342
Query: 293 YIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVA 352
+ PT+ T++T DM + E+FGPV +L + ++EAI+ AN T +GL + T+D
Sbjct: 343 FYPPTVITDITPDMRLYTEEVFGPVASLYRVADIDEAIEIANATTFGLGSNAWTRDEAEQ 402
Query: 353 NTVSRSIRAGIIWINCYFAFDSDCPYGGYKMSGFGRDCGLESLHNYLQVKSV 404
+ AG ++IN + P+GG K SG+GR+ + + +K+V
Sbjct: 403 ERFIDDLEAGQVFINGMTVSYPELPFGGVKRSGYGRELSAHGIREFCNIKTV 454
|
Length = 457 |
| >gnl|CDD|143402 cd07083, ALDH_P5CDH, ALDH subfamily NAD+-dependent delta(1)-pyrroline-5-carboxylate dehydrogenase-like | Back alignment and domain information |
|---|
Score = 225 bits (576), Expect = 7e-69
Identities = 124/403 (30%), Positives = 209/403 (51%), Gaps = 15/403 (3%)
Query: 1 MLKFADLIEEHAEVLAVLEALDAGKLHSWAK-MGDIPGAANTLRYYAGAADKIHG--EVL 57
+LK ADL+ L + GK +W + + D+ A + +RYYA AA ++ +
Sbjct: 83 LLKAADLLRRRRRELIATLTYEVGK--NWVEAIDDVAEAIDFIRYYARAALRLRYPAVEV 140
Query: 58 KMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYF 117
+ +G I PWNFP +F + +A G T+I KPAE ++
Sbjct: 141 VPYPGEDNESFYVGLGAGVVISPWNFPVAIFTGMIVAPVAVGNTVIAKPAEDAVVVGYKV 200
Query: 118 AHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAA-----T 172
+ AG P GV+ +PG G GA + H I ++FTGS + G+++ +AAA
Sbjct: 201 FEIFHEAGFPPGVVQFLPGVGEEVGAYLTEHERIRGINFTGSLETGKKIYEAAARLAPGQ 260
Query: 173 SNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFE 232
+ K + +E GGK+ +++ + D + ++ +G+ C A+SR+ + +G Y+
Sbjct: 261 TWFKRLYVETGGKNAIIVDETADFELVVEGVVVSAFGFQGQKCSAASRLILTQGAYEPVL 320
Query: 233 KKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIGKKGY 292
++L+++A+ VG P + GP +D +Q ++LSYIEHGK EG L+ GGK + +GY
Sbjct: 321 ERLLKRAERLSVGPPEENGTDLGPVIDAEQEAKVLSYIEHGKNEG-QLVLGGKRLEGEGY 379
Query: 293 YIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVE--EAIKSANNTRYGLAAGIMTKDLN 350
++ PT+ V IA+ EIFGPV++++++K + EA++ AN+T YGL G+ ++
Sbjct: 380 FVAPTVVEEVPPKARIAQEEIFGPVLSVIRYKDDDFAEALEVANSTPYGLTGGVYSRKRE 439
Query: 351 VANTVSRSIRAGIIWIN--CYFAFDSDCPYGGYKMSGFGRDCG 391
R G ++IN A P+GG+K+SG G
Sbjct: 440 HLEEARREFHVGNLYINRKITGALVGVQPFGGFKLSGTNAKTG 482
|
ALDH subfamily of the NAD+-dependent, delta(1)-pyrroline-5-carboxylate dehydrogenases (P5CDH, EC=1.5.1.12). The proline catabolic enzymes, proline dehydrogenase and P5CDH catalyze the two-step oxidation of proline to glutamate. P5CDH catalyzes the oxidation of glutamate semialdehyde, utilizing NAD+ as the electron acceptor. In some bacteria, the two enzymes are fused into the bifunctional flavoenzyme, proline utilization A (PutA). These enzymes play important roles in cellular redox control, superoxide generation, and apoptosis. In certain prokaryotes such as Escherichia coli, PutA is also a transcriptional repressor of the proline utilization genes. Monofunctional enzyme sequences such as those seen in the Bacillus RocA P5CDH are also present in this subfamily as well as the human ALDH4A1 P5CDH and the Drosophila Aldh17 P5CDH. Length = 500 |
| >gnl|CDD|143466 cd07148, ALDH_RL0313, Uncharacterized ALDH ( RL0313) with similarity to Tortula ruralis aldehyde dehydrogenase ALDH21A1 | Back alignment and domain information |
|---|
Score = 224 bits (572), Expect = 9e-69
Identities = 135/398 (33%), Positives = 204/398 (51%), Gaps = 26/398 (6%)
Query: 3 KFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKM--- 59
+ ADL+EE A+ LA+L A + GK AK+ ++ A + + A ++ G + M
Sbjct: 52 RLADLMEERADELALLIAREGGKPLVDAKV-EVTRAIDGVELAADELGQLGGREIPMGLT 110
Query: 60 --SRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYF 117
S +T REPIGVV I +N P + +V+PA+AAGC +IVKPA TPL L F
Sbjct: 111 PASAGRIAFTTREPIGVVVAISAFNHPLNLIVHQVAPAIAAGCPVIVKPALATPLSCLAF 170
Query: 118 AHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDK----VSFTGSTDVGRQVMQAAATS 173
L AG+P+G VP A+A + D SF GS VG + S
Sbjct: 171 VDLLHEAGLPEGWCQAVP-----CENAVAEKLVTDPRVAFFSFIGSARVGWML-----RS 220
Query: 174 NLKP---VSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDE 230
L P +LE GG +P+++ D++ + G ++ G++CV+ RV+V I D+
Sbjct: 221 KLAPGTRCALEHGGAAPVIVDRSADLDAMIPPLVKGGFYHAGQVCVSVQRVFVPAEIADD 280
Query: 231 FEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIGKK 290
F ++L A+ VVGDP DP GP + ++ DR+ ++ GA LL GGK +
Sbjct: 281 FAQRLAAAAEKLVVGDPTDPDTEVGPLIRPREVDRVEEWVNEAVAAGARLLCGGKRLSDT 340
Query: 291 GYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLN 350
Y PT+ + D ++ EIFGPV+ + + ++EAI AN+ A + TKDL+
Sbjct: 341 TY--APTVLLDPPRDAKVSTQEIFGPVVCVYSYDDLDEAIAQANSLPVAFQAAVFTKDLD 398
Query: 351 VANTVSRSIRAGIIWINCYFAFDSD-CPYGGYKMSGFG 387
VA R + A + +N + AF D P+ G + SG+G
Sbjct: 399 VALKAVRRLDATAVMVNDHTAFRVDWMPFAGRRQSGYG 436
|
Uncharacterized aldehyde dehydrogenase (locus RL0313) with sequence similarity to the moss Tortula ruralis aldehyde dehydrogenase ALDH21A1 (RNP123) believed to play an important role in the detoxification of aldehydes generated in response to desiccation- and salinity-stress, and similar sequences are included in this CD. Length = 455 |
| >gnl|CDD|143443 cd07125, ALDH_PutA-P5CDH, Delta(1)-pyrroline-5-carboxylate dehydrogenase, PutA | Back alignment and domain information |
|---|
Score = 217 bits (555), Expect = 2e-65
Identities = 131/402 (32%), Positives = 194/402 (48%), Gaps = 31/402 (7%)
Query: 3 KFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMSR- 61
K ADL+E + L L A +AGK + A ++ A + RYYA A ++ +
Sbjct: 99 KAADLLEANRGELIALAAAEAGKTLADA-DAEVREAIDFCRYYAAQARELFSDPELPGPT 157
Query: 62 -ALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHL 120
L G L GV I PWNFP +F +++ ALAAG T+I KPAEQTPLIA L
Sbjct: 158 GELNGLEL-HGRGVFVCISPWNFPLAIFTGQIAAALAAGNTVIAKPAEQTPLIAARAVEL 216
Query: 121 AKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQ--AAATSNLKPV 178
AGVP VL +VPG G G A+ +H ID V FTGST+ + + + A + P+
Sbjct: 217 LHEAGVPRDVLQLVPGDGEEIGEALVAHPRIDGVIFTGSTETAKLINRALAERDGPILPL 276
Query: 179 SLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEK 238
E GGK+ +++ A + + G+ C A +Y+QE I + F + L
Sbjct: 277 IAETGGKNAMIVDSTALPEQAVKDVVQSAFGSAGQRCSALRLLYLQEEIAERFIEMLKGA 336
Query: 239 AKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIGKKGYYIEPTI 298
+ VGDP+D + GP +DK + ++ E + E A L+ GY++ P I
Sbjct: 337 MASLKVGDPWDLSTDVGPLIDKPAGKLLRAHTELMRGE-AWLIAPAPLDDGNGYFVAPGI 395
Query: 299 FTNVTEDMLIAKNEIFGPVMALMKFK--TVEEAIKSANNTRYGLAAGIMTKDLNVANTVS 356
V L E+FGP++ +++FK ++EAI+ N T YGL GI ++D
Sbjct: 396 IEIVGIFDL--TTEVFGPILHVIRFKAEDLDEAIEDINATGYGLTLGIHSRDEREIEYWR 453
Query: 357 RSIRAGIIWIN-----------CYFAFDSDCPYGGYKMSGFG 387
+ AG ++IN P+GG+ +SG G
Sbjct: 454 ERVEAGNLYINRNITGAIVGRQ---------PFGGWGLSGTG 486
|
The proline catabolic enzymes of the aldehyde dehydrogenase (ALDH) protein superfamily, proline dehydrogenase and Delta(1)-pyrroline-5-carboxylate dehydrogenase (P5CDH, (EC=1.5.1.12 )), catalyze the two-step oxidation of proline to glutamate; P5CDH catalyzes the oxidation of glutamate semialdehyde, utilizing NAD+ as the electron acceptor. In some bacteria, the two enzymes are fused into the bifunctional flavoenzyme, proline utilization A (PutA) These enzymes play important roles in cellular redox control, superoxide generation, and apoptosis. In certain prokaryotes such as Escherichia coli, PutA is also a transcriptional repressor of the proline utilization genes. Length = 518 |
| >gnl|CDD|143448 cd07130, ALDH_F7_AASADH, NAD+-dependent alpha-aminoadipic semialdehyde dehydrogenase, ALDH family members 7A1 and 7B | Back alignment and domain information |
|---|
Score = 214 bits (548), Expect = 6e-65
Identities = 136/427 (31%), Positives = 200/427 (46%), Gaps = 60/427 (14%)
Query: 4 FADLIEEHAEVLAVLEALDAGKLHSWAK-----MGDIPGAANTLRYYAGAADKIHGEVLK 58
D + + E L L +L+ GK+ M DI + G + +++G +
Sbjct: 65 IGDALRKKKEALGKLVSLEMGKILPEGLGEVQEMIDI------CDFAVGLSRQLYGLTIP 118
Query: 59 MSRALQGYTLRE---PIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIAL 115
R G+ + E P+GVVG I +NFP ++ + AL G ++ KP+ TPL A+
Sbjct: 119 SERP--GHRMMEQWNPLGVVGVITAFNFPVAVWGWNAAIALVCGNVVVWKPSPTTPLTAI 176
Query: 116 ----YFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAA 171
A + + G+P + ++V G G G A+ + VSFTGST VGRQV QA A
Sbjct: 177 AVTKIVARVLEKNGLPGAIASLVCG-GADVGEALVKDPRVPLVSFTGSTAVGRQVGQAVA 235
Query: 172 TSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILF----NKGEICVASSRVYVQEGI 227
+ LELGG + +++ +D D+ D+A+ +LF G+ C + R+ V E I
Sbjct: 236 -ARFGRSLLELGGNNAIIVMEDADL----DLAVRAVLFAAVGTAGQRCTTTRRLIVHESI 290
Query: 228 YDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPI 287
YDE ++L + K +GDP D GP K D L+ IE K +G T+L GGK I
Sbjct: 291 YDEVLERLKKAYKQVRIGDPLDDGTLVGPLHTKAAVDNYLAAIEEAKSQGGTVLFGGKVI 350
Query: 288 GKKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTK 347
G Y+EPTI D I K E F P++ ++KF T+EEAI N GL++ I T
Sbjct: 351 DGPGNYVEPTIVE-GLSDAPIVKEETFAPILYVLKFDTLEEAIAWNNEVPQGLSSSIFTT 409
Query: 348 DLNVANTVSRSIRAGIIWINCYFAFDSDC----------------PYGGYKMSGFGRDCG 391
DL R W+ SDC +GG K +G GR+ G
Sbjct: 410 DL----------RNAFRWLG---PKGSDCGIVNVNIGTSGAEIGGAFGGEKETGGGRESG 456
Query: 392 LESLHNY 398
++ Y
Sbjct: 457 SDAWKQY 463
|
Alpha-aminoadipic semialdehyde dehydrogenase (AASADH, EC=1.2.1.31), also known as ALDH7A1, Antiquitin-1, ALDH7B, or delta-1-piperideine-6-carboxylate dehydrogenase (P6CDH), is a NAD+-dependent ALDH. Human ALDH7A1 is involved in the pipecolic acid pathway of lysine catabolism, catalyzing the oxidation of alpha-aminoadipic semialdehyde to alpha-aminoadipate. Arabidopsis thaliana ALDH7B4 appears to be an osmotic-stress-inducible ALDH gene encoding a turgor-responsive or stress-inducible ALDH. The Streptomyces clavuligerus P6CDH appears to be involved in cephamycin biosynthesis, catalyzing the second stage of the two-step conversion of lysine to alpha-aminoadipic acid. The ALDH7A1 enzyme and others in this group have been observed as tetramers, yet the bacterial P6CDH enzyme has been reported as a monomer. Length = 474 |
| >gnl|CDD|143406 cd07087, ALDH_F3-13-14_CALDH-like, ALDH subfamily: Coniferyl aldehyde dehydrogenase, ALDH families 3, 13, and 14, and other related proteins | Back alignment and domain information |
|---|
Score = 212 bits (543), Expect = 9e-65
Identities = 112/333 (33%), Positives = 176/333 (52%), Gaps = 25/333 (7%)
Query: 64 QGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKL 123
+ Y + EP+GVV I PWN+P + + A+AAG T+++KP+E P + A LAKL
Sbjct: 93 KAYVIPEPLGVVLIIGPWNYPLQLALAPLIGAIAAGNTVVLKPSELAPATS---ALLAKL 149
Query: 124 AG--VPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLE 181
+ VV G A A +A D + FTGS VG+ VM+AAA +L PV+LE
Sbjct: 150 IPKYFDPEAVAVVEGGVEVATALLAEPFD--HIFFTGSPAVGKIVMEAAA-KHLTPVTLE 206
Query: 182 LGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKA 241
LGGKSP ++ D ++ AA G N G+ C+A V V E I DE ++L + K
Sbjct: 207 LGGKSPCIVDKDANLEVAARRIAWGKFLNAGQTCIAPDYVLVHESIKDELIEELKKAIKE 266
Query: 242 WVVGDPFDPAVRQGPQ----VDKKQFDRILSYIEHGKREGATLLTGGKPIGKKGYYIEPT 297
+ DP ++ P ++++ FDR+ S ++ GK ++ GG+ + K+ YI PT
Sbjct: 267 FYGEDP-----KESPDYGRIINERHFDRLASLLDDGK-----VVIGGQ-VDKEERYIAPT 315
Query: 298 IFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVSR 357
I +V+ D + + EIFGP++ ++ + ++EAI+ N+ LA + ++D V V
Sbjct: 316 ILDDVSPDSPLMQEEIFGPILPILTYDDLDEAIEFINSRPKPLALYLFSEDKAVQERVLA 375
Query: 358 SIRAGIIWIN--CYFAFDSDCPYGGYKMSGFGR 388
+G + +N A + P+GG SG G
Sbjct: 376 ETSSGGVCVNDVLLHAAIPNLPFGGVGNSGMGA 408
|
ALDH subfamily which includes NAD(P)+-dependent, aldehyde dehydrogenase, family 3 member A1 and B1 (ALDH3A1, ALDH3B1, EC=1.2.1.5) and fatty aldehyde dehydrogenase, family 3 member A2 (ALDH3A2, EC=1.2.1.3), and also plant ALDH family members ALDH3F1, ALDH3H1, and ALDH3I1, fungal ALDH14 (YMR110C) and the protozoan family 13 member (ALDH13), as well as coniferyl aldehyde dehydrogenases (CALDH, EC=1.2.1.68), and other similar sequences, such as the Pseudomonas putida benzaldehyde dehydrogenase I that is involved in the metabolism of mandelate. Length = 426 |
| >gnl|CDD|143451 cd07133, ALDH_CALDH_CalB, Coniferyl aldehyde dehydrogenase-like | Back alignment and domain information |
|---|
Score = 209 bits (535), Expect = 2e-63
Identities = 119/340 (35%), Positives = 170/340 (50%), Gaps = 44/340 (12%)
Query: 70 EPIGVVGHIIPWNFPTTMFFMKVSP---ALAAGCTMIVKPAEQTP--------LIALYFA 118
+P+GVVG I+PWN+P ++ + P ALAAG +++KP+E TP L+A YF
Sbjct: 100 QPLGVVGIIVPWNYP---LYLALGPLIAALAAGNRVMIKPSEFTPRTSALLAELLAEYFD 156
Query: 119 --HLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLK 176
+A VV G G AA S + D + FTGST VGR VM+AAA NL
Sbjct: 157 EDEVA-----------VVTG-GADVAAAF-SSLPFDHLLFTGSTAVGRHVMRAAA-ENLT 202
Query: 177 PVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLV 236
PV+LELGGKSP +I D D+ AA+ G L N G+ CVA V V E +EF V
Sbjct: 203 PVTLELGGKSPAIIAPDADLAKAAERIAFGKLLNAGQTCVAPDYVLVPEDKLEEF----V 258
Query: 237 EKAKAWVVGDPFDPAVRQGPQ----VDKKQFDRILSYIEHGKREGATL--LTGGKPIGKK 290
AKA V P + P ++++ + R+ +E + +GA + L
Sbjct: 259 AAAKAAVAK--MYPTLADNPDYTSIINERHYARLQGLLEDARAKGARVIELNPAGEDFAA 316
Query: 291 GYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLN 350
+ PT+ NVT+DM + + EIFGP++ ++ + +++EAI N LA +D
Sbjct: 317 TRKLPPTLVLNVTDDMRVMQEEIFGPILPILTYDSLDEAIDYINARPRPLALYYFGEDKA 376
Query: 351 VANTVSRSIRAGIIWIN-CYF-AFDSDCPYGGYKMSGFGR 388
+ V R +G + IN D P+GG SG G
Sbjct: 377 EQDRVLRRTHSGGVTINDTLLHVAQDDLPFGGVGASGMGA 416
|
Coniferyl aldehyde dehydrogenase (CALDH, EC=1.2.1.68) of Pseudomonas sp. strain HR199 (CalB) which catalyzes the NAD+-dependent oxidation of coniferyl aldehyde to ferulic acid, and similar sequences, are present in this CD. Length = 434 |
| >gnl|CDD|143452 cd07134, ALDH_AlkH-like, Pseudomonas putida Aldehyde dehydrogenase AlkH-like | Back alignment and domain information |
|---|
Score = 206 bits (526), Expect = 4e-62
Identities = 126/391 (32%), Positives = 180/391 (46%), Gaps = 47/391 (12%)
Query: 12 AEVLAVLEALD--AGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMSRALQGYTLR 69
E+L VL ++ L W K P T G KI
Sbjct: 58 TEILPVLSEINHAIKHLKKWMK----PKRVRTPLLLFGTKSKIR---------------Y 98
Query: 70 EPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDG 129
EP GV I PWN+P + F + A+AAG T I+KP+E TP + A + + A D
Sbjct: 99 EPKGVCLIISPWNYPFNLAFGPLVSAIAAGNTAILKPSELTPHTSAVIAKIIREAFDEDE 158
Query: 130 VLNVVPGFGPTAGAAIASH---MDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKS 186
V V G A +A + D + FTGS VG+ VM AAA +L V+LELGGKS
Sbjct: 159 V-AVFEG-----DAEVAQALLELPFDHIFFTGSPAVGKIVMAAAA-KHLASVTLELGGKS 211
Query: 187 PLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVV-- 244
P ++ + D+ AA G N G+ C+A V+V E + D F VE KA +
Sbjct: 212 PTIVDETADLKKAAKKIAWGKFLNAGQTCIAPDYVFVHESVKDAF----VEHLKAEIEKF 267
Query: 245 -GDPFDPAVRQGPQ----VDKKQFDRILSYIEHGKREGATLLTGGKPIGKKGYYIEPTIF 299
G D A + P V+ + FDR+ ++ +GA + GG+ YI PT+
Sbjct: 268 YGK--DAARKASPDLARIVNDRHFDRLKGLLDDAVAKGAKVEFGGQ-FDAAQRYIAPTVL 324
Query: 300 TNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSI 359
TNVT DM I + EIFGPV+ ++ ++ ++E I+ N LA + +KD N V
Sbjct: 325 TNVTPDMKIMQEEIFGPVLPIITYEDLDEVIEYINAKPKPLALYVFSKDKANVNKVLART 384
Query: 360 RAGIIWINCYFA--FDSDCPYGGYKMSGFGR 388
+G + +N + + P+GG SG G
Sbjct: 385 SSGGVVVNDVVLHFLNPNLPFGGVNNSGIGS 415
|
Aldehyde dehydrogenase AlkH (locus name P12693, EC=1.2.1.3) of the alkBFGHJKL operon that allows Pseudomonas putida to metabolize alkanes and the aldehyde dehydrogenase AldX of Bacillus subtilis (locus P46329, EC=1.2.1.3), and similar sequences, are present in this CD. Length = 433 |
| >gnl|CDD|130783 TIGR01722, MMSDH, methylmalonic acid semialdehyde dehydrogenase | Back alignment and domain information |
|---|
Score = 207 bits (527), Expect = 6e-62
Identities = 134/420 (31%), Positives = 206/420 (49%), Gaps = 24/420 (5%)
Query: 1 MLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVL-KM 59
+L++ L++EH + +A L + GK HS A GD+ + + G + GE ++
Sbjct: 66 LLRYQALLKEHRDEIAELITAEHGKTHSDAL-GDVARGLEVVEHACGVNSLLKGETSTQV 124
Query: 60 SRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAH 119
+ + Y++R+P+GV I P+NFP + A+A G T ++KP+E+ P A+ A
Sbjct: 125 ATRVDVYSIRQPLGVCAGITPFNFPAMIPLWMFPIAIACGNTFVLKPSEKVPSAAVKLAE 184
Query: 120 LAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVS 179
L AG PDGVLNVV G A + H D+ VSF GST +GR + +++ K V
Sbjct: 185 LFSEAGAPDGVLNVVHG-DKEAVDRLLEHPDVKAVSFVGSTPIGRYIHT-TGSAHGKRVQ 242
Query: 180 LELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKA 239
G K+ +++ D D + AAD + G+ C+A S V G DE+ ++ E+A
Sbjct: 243 ALGGAKNHMVVMPDADKDAAADALVGAAYGAAGQRCMAISAA-VLVGAADEWVPEIRERA 301
Query: 240 KAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIGKKGY----YIE 295
+ +G DP GP + + DR+ S I G EGA +L G+ GY ++
Sbjct: 302 EKIRIGPGDDPGAEMGPLITPQAKDRVASLIAGGAAEGAEVLLDGRGYKVDGYEEGNWVG 361
Query: 296 PTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTV 355
PT+ V M + EIFGPV+ +++ T+EEAI N + YG I T+D A
Sbjct: 362 PTLLERVPPTMKAYQEEIFGPVLCVLEADTLEEAIALINASPYGNGTAIFTRDGAAARRF 421
Query: 356 SRSIRAGIIWINC-------YFAFDSDCPYGGYKMSGFG--RDCGLESLHNYLQVKSVVT 406
I G + +N YF+F G+K S FG G + H Y + K+V T
Sbjct: 422 QHEIEVGQVGVNVPIPVPLPYFSF------TGWKDSFFGDHHIYGKQGTHFYTRGKTVTT 475
|
Involved in valine catabolism, methylmalonate-semialdehyde dehydrogenase catalyzes the irreversible NAD+- and CoA-dependent oxidative decarboxylation of methylmalonate semialdehyde to propionyl-CoA. Methylmalonate-semialdehyde dehydrogenase has been characterized in both prokaryotes and eukaryotes, functioning as a mammalian tetramer and a bacterial homodimer. Although similar in monomeric molecular mass and enzymatic activity, the N-terminal sequence in P.aeruginosa does not correspond with the N-terminal sequence predicted for rat liver. Sequence homology to a variety of prokaryotic and eukaryotic aldehyde dehydrogenases places MMSDH in the aldehyde dehydrogenase (NAD+) superfamily (pfam00171), making MMSDH's CoA requirement unique among known ALDHs. Methylmalonate semialdehyde dehydrogenase is closely related to betaine aldehyde dehydrogenase, 2-hydroxymuconic semialdehyde dehydrogenase, and class 1 and 2 aldehyde dehydrogenase. In Bacillus, a highly homologous protein to methylmalonic acid semialdehyde dehydrogenase, groups out from the main MMSDH clade with Listeria and Sulfolobus. This Bacillus protein has been suggested to be located in an iol operon and/or involved in myo-inositol catabolism, converting malonic semialdehyde to acetyl CoA ad CO2. The preceeding enzymes responsible for valine catabolism are present in Bacillus, Listeria, and Sulfolobus [Energy metabolism, Amino acids and amines]. Length = 477 |
| >gnl|CDD|143414 cd07095, ALDH_SGSD_AstD, N-succinylglutamate 5-semialdehyde dehydrogenase, AstD-like | Back alignment and domain information |
|---|
Score = 201 bits (513), Expect = 3e-60
Identities = 121/388 (31%), Positives = 191/388 (49%), Gaps = 5/388 (1%)
Query: 3 KFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMSRA 62
+FA+L++ + E LA L + + GK W ++ A + A + GE
Sbjct: 30 RFAELLKANKEELARLISRETGK-PLWEAQTEVAAMAGKIDISIKAYHERTGERATPMAQ 88
Query: 63 LQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAK 122
+ P GV+ P+NFP + + PAL AG T++ KP+E TP +A L +
Sbjct: 89 GRAVLRHRPHGVMAVFGPFNFPGHLPNGHIVPALLAGNTVVFKPSELTPAVAELMVELWE 148
Query: 123 LAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLEL 182
AG+P GVLN+V G G G A+A+H ID + FTGS G + + A K ++LE+
Sbjct: 149 EAGLPPGVLNLVQG-GRETGEALAAHEGIDGLLFTGSAATGLLLHRQFAGRPGKILALEM 207
Query: 183 GGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIY-DEFEKKLVEKAKA 241
GG +PL+++D D++ AA + + G+ C + R+ V +G D F ++LVE AK
Sbjct: 208 GGNNPLVVWDVADIDAAAYLIVQSAFLTAGQRCTCARRLIVPDGAVGDAFLERLVEAAKR 267
Query: 242 WVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIGKKGYYIEPTIFTN 301
+G P GP + R L + G L + + ++ P I +
Sbjct: 268 LRIGAPDAEPPFMGPLIIAAAAARYLLAQQDLLALGGEPLLAMERLVAGTAFLSPGII-D 326
Query: 302 VTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSIRA 361
VT+ + EIFGP++ + ++ +EAI AN TR+GL+AG+++ D + IRA
Sbjct: 327 VTDAADVPDEEIFGPLLQVYRYDDFDEAIALANATRFGLSAGLLSDDEALFERFLARIRA 386
Query: 362 GIIWINCYFAF-DSDCPYGGYKMSGFGR 388
GI+ N S P+GG +SG R
Sbjct: 387 GIVNWNRPTTGASSTAPFGGVGLSGNHR 414
|
N-succinylglutamate 5-semialdehyde dehydrogenase or succinylglutamic semialdehyde dehydrogenase (SGSD, E. coli AstD, EC=1.2.1.71) involved in L-arginine degradation via the arginine succinyltransferase (AST) pathway and catalyzes the NAD+-dependent reduction of succinylglutamate semialdehyde into succinylglutamate. Length = 431 |
| >gnl|CDD|143453 cd07135, ALDH_F14-YMR110C, Saccharomyces cerevisiae aldehyde dehydrogenase family 14 and related proteins | Back alignment and domain information |
|---|
Score = 200 bits (511), Expect = 7e-60
Identities = 114/327 (34%), Positives = 170/327 (51%), Gaps = 21/327 (6%)
Query: 69 REPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPD 128
+EP+GVV I PWN+P + + A+AAGCT+++KP+E TP A A L +
Sbjct: 106 KEPLGVVLIIGPWNYPVLLALSPLVGAIAAGCTVVLKPSELTPHTAALLAELVP-KYLDP 164
Query: 129 GVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPL 188
VV G P A + D K+ +TGS VGR + +AAA +L PV+LELGGKSP+
Sbjct: 165 DAFQVVQGGVPETTALLEQKFD--KIFYTGSGRVGRIIAEAAA-KHLTPVTLELGGKSPV 221
Query: 189 LIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPF 248
++ + D+ AA L G N G+ICVA V V +YDEF VE+ K + D F
Sbjct: 222 IVTKNADLELAAKRILWGKFGNAGQICVAPDYVLVDPSVYDEF----VEELKKVL--DEF 275
Query: 249 DPAVRQGPQ-----VDKKQFDRILSYIEHGKREGATLLTGGKPIGKKGYYIEPTIFTNVT 303
P V+ + F+R+ S ++ K + ++ GG+ +I PTI ++V+
Sbjct: 276 YPGGANASPDYTRIVNPRHFNRLKSLLDTTKGK---VVIGGEMDEAT-RFIPPTIVSDVS 331
Query: 304 EDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSIRAGI 363
D + E+FGPV+ ++K ++EAIK N+ LA I T D + + + R+G
Sbjct: 332 WDDSLMSEELFGPVLPIIKVDDLDEAIKVINSRDTPLALYIFTDDKSEIDHILTRTRSGG 391
Query: 364 IWIN-CYFAFDSD-CPYGGYKMSGFGR 388
+ IN D P+GG SG+G
Sbjct: 392 VVINDTLIHVGVDNAPFGGVGDSGYGA 418
|
Aldehyde dehydrogenase family 14 (ALDH14), isolated mainly from the mitochondrial outer membrane of Saccharomyces cerevisiae (YMR110C) and most closely related to the plant and animal ALDHs and fatty ALDHs family 3 members, and similar fungal sequences, are present in this CD. Length = 436 |
| >gnl|CDD|143454 cd07136, ALDH_YwdH-P39616, Bacillus subtilis aldehyde dehydrogenase ywdH-like | Back alignment and domain information |
|---|
Score = 195 bits (497), Expect = 1e-57
Identities = 117/359 (32%), Positives = 181/359 (50%), Gaps = 45/359 (12%)
Query: 65 GYTLREPIGVVGHIIPWNFPTTMFFMKVSP---ALAAGCTMIVKPAEQTP--------LI 113
Y EP GVV I PWN+P F + ++P A+AAG T ++KP+E TP +I
Sbjct: 94 SYIYYEPYGVVLIIAPWNYP---FQLALAPLIGAIAAGNTAVLKPSELTPNTSKVIAKII 150
Query: 114 ALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATS 173
F + + VV G + D + FTGS VG+ VM+AAA
Sbjct: 151 EETF---------DEEYVAVVEGGVEENQELLDQKFD--YIFFTGSVRVGKIVMEAAAK- 198
Query: 174 NLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEK 233
+L PV+LELGGKSP ++ +D ++ AA + G N G+ CVA V V E + ++F K
Sbjct: 199 HLTPVTLELGGKSPCIVDEDANLKLAAKRIVWGKFLNAGQTCVAPDYVLVHESVKEKFIK 258
Query: 234 KLVEKAKAWVVGDPFDPAVRQGPQ----VDKKQFDRILSYIEHGKREGATLLTGGKPIGK 289
+L E+ K + DP + P +++K FDR+ +++GK ++ GG +
Sbjct: 259 ELKEEIKKFYGEDP-----LESPDYGRIINEKHFDRLAGLLDNGK-----IVFGGN-TDR 307
Query: 290 KGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDL 349
+ YIEPTI NVT D + + EIFGP++ ++ + T++EAI+ + LA + ++D
Sbjct: 308 ETLYIEPTILDNVTWDDPVMQEEIFGPILPVLTYDTLDEAIEIIKSRPKPLALYLFSEDK 367
Query: 350 NVANTVSRSIRAGIIWIN---CYFAFDSDCPYGGYKMSGFGRDCGLESLHNYLQVKSVV 405
V V ++ G IN + A + P+GG SG G G S + KS++
Sbjct: 368 KVEKKVLENLSFGGGCINDTIMHLA-NPYLPFGGVGNSGMGSYHGKYSFDTFSHKKSIL 425
|
Uncharacterized Bacillus subtilis ywdH aldehyde dehydrogenase (locus P39616) most closely related to the ALDHs and fatty ALDHs of families 3 and 14, and similar sequences, are included in this CD. Length = 449 |
| >gnl|CDD|184426 PRK13968, PRK13968, putative succinate semialdehyde dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 194 bits (494), Expect = 3e-57
Identities = 130/402 (32%), Positives = 193/402 (48%), Gaps = 13/402 (3%)
Query: 8 IEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHG-EVLKMSRAL--- 63
+ +E +A + + GK + A+ ++ +AN +YA HG +LK L
Sbjct: 64 LRARSEEMAQMITREMGKPINQAR-AEVAKSANLCDWYAE-----HGPAMLKAEPTLVEN 117
Query: 64 -QGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAK 122
Q P+G + I+PWNFP P L AG ++K A A A + K
Sbjct: 118 QQAVIEYRPLGTILAIMPWNFPLWQVMRGAVPILLAGNGYLLKHAPNVMGCAQLIAQVFK 177
Query: 123 LAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLEL 182
AG+P GV + I + I V+ TGS G + A A + LK LEL
Sbjct: 178 DAGIPQGVYGWLNADNDGVSQMI-NDSRIAAVTVTGSVRAGAAI-GAQAGAALKKCVLEL 235
Query: 183 GGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAW 242
GG P ++ +D D+ A A+ G N G++C A+ R ++EGI F ++ V A A
Sbjct: 236 GGSDPFIVLNDADLELAVKAAVAGRYQNTGQVCAAAKRFIIEEGIASAFTERFVAAAAAL 295
Query: 243 VVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIGKKGYYIEPTIFTNV 302
+GDP D GP D + +E EGA LL GG+ I G Y PT+ NV
Sbjct: 296 KMGDPRDEENALGPMARFDLRDELHHQVEATLAEGARLLLGGEKIAGAGNYYAPTVLANV 355
Query: 303 TEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSIRAG 362
T +M + E+FGPV A+ K E A++ AN++ +GL+A I T D A ++ + G
Sbjct: 356 TPEMTAFREELFGPVAAITVAKDAEHALELANDSEFGLSATIFTTDETQARQMAARLECG 415
Query: 363 IIWINCYFAFDSDCPYGGYKMSGFGRDCGLESLHNYLQVKSV 404
++IN Y A D+ +GG K SGFGR+ LH + +++V
Sbjct: 416 GVFINGYCASDARVAFGGVKKSGFGRELSHFGLHEFCNIQTV 457
|
Length = 462 |
| >gnl|CDD|237017 PRK11904, PRK11904, bifunctional proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Score = 195 bits (499), Expect = 4e-55
Identities = 129/386 (33%), Positives = 195/386 (50%), Gaps = 38/386 (9%)
Query: 3 KFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMSRA 62
+ ADL+E + L L +AGK A + ++ A + RYYA A ++ G
Sbjct: 615 RAADLLEANRAELIALCVREAGKTLQDA-IAEVREAVDFCRYYAAQARRLFGA----PEK 669
Query: 63 LQGYT-----LR-EPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALY 116
L G T LR GV I PWNFP +F +V+ ALAAG T+I KPAEQTPLIA
Sbjct: 670 LPGPTGESNELRLHGRGVFVCISPWNFPLAIFLGQVAAALAAGNTVIAKPAEQTPLIAAE 729
Query: 117 FAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLK 176
L AG+P VL ++PG G T GAA+ + I V+FTGST+ R + + A +
Sbjct: 730 AVKLLHEAGIPKDVLQLLPGDGATVGAALTADPRIAGVAFTGSTETARIINRTLAARDGP 789
Query: 177 PVSL--ELGGKSPLL---------IFDDVDVNTAADMALLGILFNKGEICVASSRV-YVQ 224
V L E GG++ ++ + DDV V +A A G+ C A RV +VQ
Sbjct: 790 IVPLIAETGGQNAMIVDSTALPEQVVDDV-VTSAFRSA--------GQRCSA-LRVLFVQ 839
Query: 225 EGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGG 284
E I D + L VGDP + GP +D + + ++IE KRE L
Sbjct: 840 EDIADRVIEMLKGAMAELKVGDPRLLSTDVGPVIDAEAKANLDAHIERMKREARLLAQLP 899
Query: 285 KPIG-KKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKT--VEEAIKSANNTRYGLA 341
P G + G+++ PT F + + + E+FGP++ ++++K +++ I + N T YGL
Sbjct: 900 LPAGTENGHFVAPTAFE--IDSISQLEREVFGPILHVIRYKASDLDKVIDAINATGYGLT 957
Query: 342 AGIMTKDLNVANTVSRSIRAGIIWIN 367
GI ++ A+ ++ +R G +++N
Sbjct: 958 LGIHSRIEETADRIADRVRVGNVYVN 983
|
Length = 1038 |
| >gnl|CDD|166060 PLN02419, PLN02419, methylmalonate-semialdehyde dehydrogenase [acylating] | Back alignment and domain information |
|---|
Score = 187 bits (475), Expect = 2e-53
Identities = 134/372 (36%), Positives = 185/372 (49%), Gaps = 9/372 (2%)
Query: 1 MLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVL-KM 59
MLKF +LI ++ + LA+ + GK GDI + + G A GE L +
Sbjct: 179 MLKFQELIRKNMDKLAMNITTEQGKTLK-DSHGDIFRGLEVVEHACGMATLQMGEYLPNV 237
Query: 60 SRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAH 119
S + Y++REP+GV I P+NFP + A+ G T I+KP+E+ P ++ A
Sbjct: 238 SNGVDTYSIREPLGVCAGICPFNFPAMIPLWMFPVAVTCGNTFILKPSEKDPGASVILAE 297
Query: 120 LAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVS 179
LA AG+PDGVLN+V G T AI DI VSF GS G + AA K +
Sbjct: 298 LAMEAGLPDGVLNIVHGTNDTVN-AICDDEDIRAVSFVGSNTAGMHIYARAAAKG-KRIQ 355
Query: 180 LELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKA 239
+G K+ L+ D +++ + L G+ C+A S V V G +E KLVE+A
Sbjct: 356 SNMGAKNHGLVLPDANIDATLNALLAAGFGAAGQRCMALSTV-VFVGDAKSWEDKLVERA 414
Query: 240 KAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGK----PIGKKGYYIE 295
KA V +P GP + K+ +RI I+ G +GA LL G+ P +KG +I
Sbjct: 415 KALKVTCGSEPDADLGPVISKQAKERICRLIQSGVDDGAKLLLDGRDIVVPGYEKGNFIG 474
Query: 296 PTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTV 355
PTI + VT DM K EIFGPV+ M+ + +EAI N +YG A I T A
Sbjct: 475 PTILSGVTPDMECYKEEIFGPVLVCMQANSFDEAISIINKNKYGNGAAIFTSSGAAARKF 534
Query: 356 SRSIRAGIIWIN 367
I AG I IN
Sbjct: 535 QMDIEAGQIGIN 546
|
Length = 604 |
| >gnl|CDD|181873 PRK09457, astD, succinylglutamic semialdehyde dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Score = 183 bits (467), Expect = 4e-53
Identities = 125/392 (31%), Positives = 194/392 (49%), Gaps = 18/392 (4%)
Query: 3 KFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMSRA 62
+FA L+EE+ E LA + A + GK W ++ N + A + GE
Sbjct: 67 RFAALLEENKEELAEVIARETGKPL-WEAATEVTAMINKIAISIQAYHERTGEK---RSE 122
Query: 63 LQGYT--LR-EPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAH 119
+ LR P GVV P+NFP + + PAL AG T++ KP+E TP +A
Sbjct: 123 MADGAAVLRHRPHGVVAVFGPYNFPGHLPNGHIVPALLAGNTVVFKPSELTPWVAELTVK 182
Query: 120 LAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVS 179
L + AG+P GVLN+V G G G A+A+H DID + FTGS + G + + A K ++
Sbjct: 183 LWQQAGLPAGVLNLVQG-GRETGKALAAHPDIDGLLFTGSANTGYLLHRQFAGQPEKILA 241
Query: 180 LELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIY-DEFEKKLVEK 238
LE+GG +PL+I + D++ A + + + G+ C + R+ V +G D F +LV
Sbjct: 242 LEMGGNNPLVIDEVADIDAAVHLIIQSAFISAGQRCTCARRLLVPQGAQGDAFLARLVAV 301
Query: 239 AKAWVVGDPF-DPAVRQGPQVDKKQFDRILSYIEHGKREGA-TLLTGGKPIGKKGYYIEP 296
AK VG +P G + ++ +++ G +LL + G + P
Sbjct: 302 AKRLTVGRWDAEPQPFMGAVISEQAAQGLVAAQAQLLALGGKSLLEMTQLQAGTGL-LTP 360
Query: 297 TIF--TNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANT 354
I T V E + E FGP++ ++++ +EAI+ ANNTR+GL+AG+++ D +
Sbjct: 361 GIIDVTGVAE---LPDEEYFGPLLQVVRYDDFDEAIRLANNTRFGLSAGLLSDDREDYDQ 417
Query: 355 VSRSIRAGII-WINCYFAFDSDCPYGGYKMSG 385
IRAGI+ W S P+GG SG
Sbjct: 418 FLLEIRAGIVNWNKPLTGASSAAPFGGVGASG 449
|
Length = 487 |
| >gnl|CDD|233325 TIGR01238, D1pyr5carbox3, delta-1-pyrroline-5-carboxylate dehydrogenase (PutA C-terminal domain) | Back alignment and domain information |
|---|
Score = 180 bits (459), Expect = 6e-52
Identities = 124/402 (30%), Positives = 187/402 (46%), Gaps = 31/402 (7%)
Query: 3 KFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMSRA 62
+ ADL+E H L L +AGK A + ++ A + RYYA + GE
Sbjct: 104 RLADLLELHMPELMALCVREAGKTIHNA-IAEVREAVDFCRYYAKQVRDVLGE------- 155
Query: 63 LQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAK 122
E GV I PWNFP +F ++S ALAAG T+I KPAEQT LIA L +
Sbjct: 156 ----FSVESRGVFVCISPWNFPLAIFTGQISAALAAGNTVIAKPAEQTSLIAYRAVELMQ 211
Query: 123 LAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSL-- 180
AG P G + ++PG G GAA+ S I V+FTGST+V + + Q A PV L
Sbjct: 212 EAGFPAGTIQLLPGRGADVGAALTSDPRIAGVAFTGSTEVAQLINQTLAQREDAPVPLIA 271
Query: 181 ELGGKSPLLIFDDVDVNTAADMALLGIL---FNK-GEICVASSRVYVQEGIYDEFEKKLV 236
E GG++ ++ VD + + +L F+ G+ C A + VQE + D +
Sbjct: 272 ETGGQNAMI----VDSTALPEQVVRDVLRSAFDSAGQRCSALRVLCVQEDVADRVLTMIQ 327
Query: 237 EKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGAT---LLTGGKPIGKKGYY 293
+ VG P GP +D + +L++IEH + L + G +
Sbjct: 328 GAMQELKVGVPHLLTTDVGPVIDAEAKQNLLAHIEHMSQTQKKIAQLTLDDSRACQHGTF 387
Query: 294 IEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVE--EAIKSANNTRYGLAAGIMTKDLNV 351
+ PT+F +D+ E+FGPV+ ++++K E + + N T YGL G+ ++
Sbjct: 388 VAPTLFE--LDDIAELSEEVFGPVLHVVRYKARELDQIVDQINQTGYGLTMGVHSRIETT 445
Query: 352 ANTVSRSIRAGIIWIN--CYFAFDSDCPYGGYKMSGFGRDCG 391
+ + R G ++N A P+GG +SG G G
Sbjct: 446 YRWIEKHARVGNCYVNRNQVGAVVGVQPFGGQGLSGTGPKAG 487
|
This model represents one of several related branches of delta-1-pyrroline-5-carboxylate dehydrogenase. Members of this branch are the C-terminal domain of the PutA bifunctional proline dehydrogenase / delta-1-pyrroline-5-carboxylate dehydrogenase [Energy metabolism, Amino acids and amines]. Length = 500 |
| >gnl|CDD|237018 PRK11905, PRK11905, bifunctional proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Score = 184 bits (470), Expect = 4e-51
Identities = 127/382 (33%), Positives = 191/382 (50%), Gaps = 43/382 (11%)
Query: 3 KFADLIEEHAEVLAVLEALDAGKLHSWAK-MGDIPGAANTLRYYAGAADKIHGEVLKMSR 61
+ ADL+E H L L +AGK + A + ++ A + LRYYA A R
Sbjct: 620 RAADLMEAHMPELFALAVREAGK--TLANAIAEVREAVDFLRYYAAQA-----------R 666
Query: 62 ALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLA 121
L +P+G V I PWNFP +F +++ AL AG T++ KPAEQTPLIA L
Sbjct: 667 RLLNGPGHKPLGPVVCISPWNFPLAIFTGQIAAALVAGNTVLAKPAEQTPLIAARAVRLL 726
Query: 122 KLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSL- 180
AGVP L ++PG G T GAA+ + I V FTGST+V R + + A + PV L
Sbjct: 727 HEAGVPKDALQLLPGDGRTVGAALVADPRIAGVMFTGSTEVARLIQRTLAKRSGPPVPLI 786
Query: 181 -ELGGKSPLLI---------FDDVDVNTAADMALLGILFNKGEICVASSRV-YVQEGIYD 229
E GG++ +++ DV + +A D A G+ C A RV +QE + D
Sbjct: 787 AETGGQNAMIVDSSALPEQVVADV-IASAFDSA--------GQRCSA-LRVLCLQEDVAD 836
Query: 230 EFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIG- 288
L +GDP+ + GP +D + I ++IE + G + P
Sbjct: 837 RVLTMLKGAMDELRIGDPWRLSTDVGPVIDAEAQANIEAHIEAMRAAGRLVHQLPLPAET 896
Query: 289 KKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKT--VEEAIKSANNTRYGLAAGIMT 346
+KG ++ PT+ + + + E+FGPV+ +++FK ++ I N T YGL G+ +
Sbjct: 897 EKGTFVAPTLIE--IDSISDLEREVFGPVLHVVRFKADELDRVIDDINATGYGLTFGLHS 954
Query: 347 K-DLNVANTVSRSIRAGIIWIN 367
+ D +A+ SR IRAG I++N
Sbjct: 955 RIDETIAHVTSR-IRAGNIYVN 975
|
Length = 1208 |
| >gnl|CDD|215110 PLN00412, PLN00412, NADP-dependent glyceraldehyde-3-phosphate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 178 bits (453), Expect = 6e-51
Identities = 111/336 (33%), Positives = 169/336 (50%), Gaps = 9/336 (2%)
Query: 71 PIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGV 130
P+GVV I P+N+P + K++PAL AG +++KP Q + AL+ H LAG P G+
Sbjct: 158 PLGVVLAIPPFNYPVNLAVSKIAPALIAGNAVVLKPPTQGAVAALHMVHCFHLAGFPKGL 217
Query: 131 LNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLI 190
++ V G G G + H ++ +SFTG D G + + A + P+ +ELGGK ++
Sbjct: 218 ISCVTGKGSEIGDFLTMHPGVNCISFTGG-DTGIAISKKAG---MVPLQMELGGKDACIV 273
Query: 191 FDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDP 250
+D D++ AA + G G+ C A V V E + D +K+ K VG P D
Sbjct: 274 LEDADLDLAAANIIKGGFSYSGQRCTAVKVVLVMESVADALVEKVNAKVAKLTVGPPEDD 333
Query: 251 AVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIGKKGYYIEPTIFTNVTEDMLIAK 310
P V + + I + K +GAT K ++G I P + NV DM IA
Sbjct: 334 C-DITPVVSESSANFIEGLVMDAKEKGATFCQEWK---REGNLIWPLLLDNVRPDMRIAW 389
Query: 311 NEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSIRAGIIWINCYF 370
E FGPV+ +++ +VEE I N + +GL + T+D+N A +S ++ G + IN
Sbjct: 390 EEPFGPVLPVIRINSVEEGIHHCNASNFGLQGCVFTRDINKAILISDAMETGTVQINSAP 449
Query: 371 AFDSD-CPYGGYKMSGFGRDCGLESLHNYLQVKSVV 405
A D P+ G K SG G S++ +VKS V
Sbjct: 450 ARGPDHFPFQGLKDSGIGSQGITNSINMMTKVKSTV 485
|
Length = 496 |
| >gnl|CDD|226683 COG4230, COG4230, Delta 1-pyrroline-5-carboxylate dehydrogenase [Energy production and conversion] | Back alignment and domain information |
|---|
Score = 182 bits (463), Expect = 1e-50
Identities = 129/401 (32%), Positives = 194/401 (48%), Gaps = 39/401 (9%)
Query: 3 KFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMSRA 62
+ ADL+E L L +AGK S A + ++ A + LRYYAG A R
Sbjct: 180 RAADLMEAQMPQLMGLLVREAGKTLSNA-IAEVREAVDFLRYYAGQA-----------RD 227
Query: 63 LQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAK 122
G P+G V I PWNFP +F +++ ALAAG +++ KPAEQTPLIA L
Sbjct: 228 TFGNLTHRPLGPVVCISPWNFPLAIFTGQIAAALAAGNSVLAKPAEQTPLIAAQAVRLLH 287
Query: 123 LAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSL-- 180
AGVP GVL ++PG G T GAA+ + + V FTGST+V R + + A +P+ L
Sbjct: 288 EAGVPPGVLQLLPGRGETVGAALTADARVAGVMFTGSTEVARLIQRQLAKRQGRPIPLIA 347
Query: 181 ELGGKSPLLI---------FDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEF 231
E GG++ +++ DV + +A D A G+ C A + +QE + D
Sbjct: 348 ETGGQNAMIVDSSALAEQVVADV-LASAFDSA--------GQRCSALRVLCLQEDVADRI 398
Query: 232 EKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIG-KK 290
L VG+P GP +D + I +I+ + +G + P +K
Sbjct: 399 LTMLKGAMAELRVGNPDRLTTDVGPVIDAEAKANIEKHIQTMRSKGRLVHQAAAPNSLQK 458
Query: 291 GYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKT--VEEAIKSANNTRYGLAAGIMTKD 348
G ++ PT+ D L + E+FGPV+ ++++K ++E I N T YGL G+ T+
Sbjct: 459 GTFVAPTLIELENLDEL--QREVFGPVLHVVRYKRDELDEVIDQINATGYGLTLGVHTRI 516
Query: 349 LNVANTVSRSIRAGIIWIN--CYFAFDSDCPYGGYKMSGFG 387
V+ AG +++N A P+GG +SG G
Sbjct: 517 DETIAHVTERAHAGNLYVNRNIVGAVVGVQPFGGEGLSGTG 557
|
Length = 769 |
| >gnl|CDD|240392 PTZ00381, PTZ00381, aldehyde dehydrogenase family protein; Provisional | Back alignment and domain information |
|---|
Score = 172 bits (438), Expect = 8e-49
Identities = 103/343 (30%), Positives = 166/343 (48%), Gaps = 11/343 (3%)
Query: 65 GYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLA 124
Y + EP+GVV I WN+P + + ++ A+AAG T+++KP+E +P + A L
Sbjct: 103 SYIIPEPLGVVLVIGAWNYPLNLTLIPLAGAIAAGNTVVLKPSELSPHTSKLMAKLL-TK 161
Query: 125 GVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGG 184
+ + V+ G G + D + FTGS VG+ VMQAAA NL P +LELGG
Sbjct: 162 YLDPSYVRVIEG-GVEVTTELLKE-PFDHIFFTGSPRVGKLVMQAAA-ENLTPCTLELGG 218
Query: 185 KSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVV 244
KSP+++ ++ AA G N G+ CVA V V I D+F + L E K +
Sbjct: 219 KSPVIVDKSCNLKVAARRIAWGKFLNAGQTCVAPDYVLVHRSIKDKFIEALKEAIKEF-F 277
Query: 245 GDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIGKKGYYIEPTIFTNVTE 304
G+ + V++ R+ I K G ++ GG+ + + Y+ PTI N
Sbjct: 278 GEDPKKSEDYSRIVNEFHTKRLAELI---KDHGGKVVYGGE-VDIENKYVAPTIIVNPDL 333
Query: 305 DMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSIRAGII 364
D + + EIFGP++ ++ ++ ++E ++ N+ LA +D V + +G +
Sbjct: 334 DSPLMQEEIFGPILPILTYENIDEVLEFINSRPKPLALYYFGEDKRHKELVLENTSSGAV 393
Query: 365 WIN-CYFAF-DSDCPYGGYKMSGFGRDCGLESLHNYLQVKSVV 405
IN C F + + P+GG SG G G + K V+
Sbjct: 394 VINDCVFHLLNPNLPFGGVGNSGMGAYHGKYGFDTFSHPKPVL 436
|
Length = 493 |
| >gnl|CDD|132284 TIGR03240, arg_catab_astD, succinylglutamic semialdehyde dehydrogenase | Back alignment and domain information |
|---|
Score = 167 bits (425), Expect = 5e-47
Identities = 123/390 (31%), Positives = 194/390 (49%), Gaps = 14/390 (3%)
Query: 3 KFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEV---LKM 59
+FA L+EE E LA + A + GK W ++ + A + GE +
Sbjct: 65 RFAALLEERKEALARVIARETGK-PLWETRTEVASMIGKVAISIKAYHERTGESENPMPD 123
Query: 60 SRALQGYTLR-EPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFA 118
RA+ LR P GVV P+NFP + + PAL AG T++ KP+E TP +A
Sbjct: 124 GRAV----LRHRPHGVVAVFGPYNFPGHLPNGHIVPALLAGNTVVFKPSELTPWVAEETV 179
Query: 119 HLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPV 178
L + AG+P GVLN+V G G A+A+H DID + FTGS++ G + + A K +
Sbjct: 180 KLWEKAGLPAGVLNLVQG-ARETGVALAAHPDIDGLLFTGSSNTGHLLHRQFAGRPEKIL 238
Query: 179 SLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIY-DEFEKKLVE 237
+LE+GG +PL++ + D++ A + + + G+ C + R+ V +G D F +LVE
Sbjct: 239 ALEMGGNNPLIVDEVADIDAAVHLIIQSAFISAGQRCTCARRLLVPDGAQGDAFLARLVE 298
Query: 238 KAKAWVVGD-PFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIGKKGYYIEP 296
A+ VG +P G + + R+L+ G L + + + P
Sbjct: 299 VAERLTVGAWDAEPQPFMGAVISLQAAQRLLAAQAKLLALGGKSLLAMRQLDPGAALLTP 358
Query: 297 TIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVS 356
I +VT + E FGP++ ++++ +EAI ANNTR+GL+AG+++ D + +
Sbjct: 359 GII-DVTGVAELPDEEHFGPLLQVIRYDDFDEAIAIANNTRFGLSAGLLSDDRELYDRFL 417
Query: 357 RSIRAGII-WINCYFAFDSDCPYGGYKMSG 385
IRAGI+ W S P+GG SG
Sbjct: 418 LEIRAGIVNWNKPLTGASSAAPFGGIGASG 447
|
Members of this protein family are succinylglutamic semialdehyde dehydrogenase (EC 1.2.1.71), the fourth enzyme in the arginine succinyltransferase (AST) pathway for arginine catabolism [Energy metabolism, Amino acids and amines]. Length = 484 |
| >gnl|CDD|143455 cd07137, ALDH_F3FHI, Plant aldehyde dehydrogenase family 3 members F1, H1, and I1 and related proteins | Back alignment and domain information |
|---|
Score = 160 bits (406), Expect = 9e-45
Identities = 108/330 (32%), Positives = 158/330 (47%), Gaps = 26/330 (7%)
Query: 70 EPIGVVGHIIPWNFPTTMFFMKVSP---ALAAGCTMIVKPAEQTPLIALYFAHLAKLAG- 125
EP+GVV I WNFP F + + P A+AAG +++KP+E P + A LAKL
Sbjct: 100 EPLGVVLVISAWNFP---FLLSLEPVIGAIAAGNAVVLKPSELAPATS---ALLAKLIPE 153
Query: 126 -VPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGG 184
+ + V+ G G A+ DK+ FTGS VGR +M AAA +L PV+LELGG
Sbjct: 154 YLDTKAIKVIEG-GVPETTALLEQ-KWDKIFFTGSPRVGRIIM-AAAAKHLTPVTLELGG 210
Query: 185 KSPLLIFDDVDVNTAADMALLGIL-FNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWV 243
K P+++ VD+ A G N G+ C+A V V+E L + +
Sbjct: 211 KCPVIVDSTVDLKVAVRRIAGGKWGCNNGQACIAPDYVLVEESFAPTLIDALKNTLEKFF 270
Query: 244 VGDPF--DPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIGKKGYYIEPTIFTN 301
+P R V+ F R LS + ++ GG+ +K YIEPTI +
Sbjct: 271 GENPKESKDLSRI---VNSHHFQR-LSRLLDDPSVADKIVHGGE-RDEKNLYIEPTILLD 325
Query: 302 VTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSIRA 361
D I EIFGP++ ++ K +EE+I+ N+ LAA + TK+ + + +
Sbjct: 326 PPLDSSIMTEEIFGPLLPIITVKKIEESIEIINSRPKPLAAYVFTKNKELKRRIVAETSS 385
Query: 362 GIIWIN---CYFAFDSDCPYGGYKMSGFGR 388
G + N +A D P+GG SGFG
Sbjct: 386 GGVTFNDTVVQYAID-TLPFGGVGESGFGA 414
|
Aldehyde dehydrogenase family members 3F1, 3H1, and 3I1 (ALDH3F1, ALDH3H1, and ALDH3I1), and similar plant sequences, are in this CD. In Arabidopsis thaliana, stress-regulated expression of ALDH3I1 was observed in leaves and osmotic stress expression of ALDH3H1 was observed in root tissue, whereas, ALDH3F1 expression was not stress responsive. Functional analysis of ALDH3I1 suggest it may be involved in a detoxification pathway in plants that limits aldehyde accumulation and oxidative stress. Length = 432 |
| >gnl|CDD|143450 cd07132, ALDH_F3AB, Aldehyde dehydrogenase family 3 members A1, A2, and B1 and related proteins | Back alignment and domain information |
|---|
Score = 157 bits (400), Expect = 9e-44
Identities = 102/337 (30%), Positives = 166/337 (49%), Gaps = 37/337 (10%)
Query: 66 YTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTP----LIA-LYFAHL 120
Y +EP+GVV I WN+P + + + A+AAG +++KP+E +P L+A L +L
Sbjct: 95 YIYKEPLGVVLIIGAWNYPLQLTLVPLVGAIAAGNCVVIKPSEVSPATAKLLAELIPKYL 154
Query: 121 AK------LAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSN 174
K L GV + + F D + +TGST VG+ VMQAAA +
Sbjct: 155 DKECYPVVLGGVEETTELLKQRF--------------DYIFYTGSTSVGKIVMQAAA-KH 199
Query: 175 LKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKK 234
L PV+LELGGKSP + D++ AA G N G+ C+A V + ++F +
Sbjct: 200 LTPVTLELGGKSPCYVDKSCDIDVAARRIAWGKFINAGQTCIAPDYVLCTPEVQEKFVEA 259
Query: 235 LVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIGKKGYYI 294
L + K + DP + G ++ + F R+ + GK + GG+ +K YI
Sbjct: 260 LKKTLKEFYGEDPKESP-DYGRIINDRHFQRLKKLLSGGK-----VAIGGQ-TDEKERYI 312
Query: 295 EPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANT 354
PT+ T+V + + EIFGP++ ++ ++EAI+ N+ LA + + + V N
Sbjct: 313 APTVLTDVKPSDPVMQEEIFGPILPIVTVNNLDEAIEFINSREKPLALYVFSNNKKVINK 372
Query: 355 VSRSIRAGIIWIN---CYFAFDSDCPYGGYKMSGFGR 388
+ + +G + +N ++ DS P+GG SG G
Sbjct: 373 ILSNTSSGGVCVNDTIMHYTLDS-LPFGGVGNSGMGA 408
|
NAD(P)+-dependent, aldehyde dehydrogenase, family 3 members A1 and B1 (ALDH3A1, ALDH3B1, EC=1.2.1.5) and fatty aldehyde dehydrogenase, family 3 member A2 (ALDH3A2, EC=1.2.1.3), and similar sequences are included in this CD. Human ALDH3A1 is a homodimer with a critical role in cellular defense against oxidative stress; it catalyzes the oxidation of various cellular membrane lipid-derived aldehydes. Corneal crystalline ALDH3A1 protects the cornea and underlying lens against UV-induced oxidative stress. Human ALDH3A2, a microsomal homodimer, catalyzes the oxidation of long-chain aliphatic aldehydes to fatty acids. Human ALDH3B1 is highly expressed in the kidney and liver and catalyzes the oxidation of various medium- and long-chain saturated and unsaturated aliphatic aldehydes. Length = 443 |
| >gnl|CDD|177949 PLN02315, PLN02315, aldehyde dehydrogenase family 7 member | Back alignment and domain information |
|---|
Score = 158 bits (401), Expect = 2e-43
Identities = 120/422 (28%), Positives = 192/422 (45%), Gaps = 50/422 (11%)
Query: 6 DLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMSRALQG 65
D + + L L +L+ GK+ + +G++ + + G + +++G ++ R
Sbjct: 89 DALRAKLDYLGRLVSLEMGKILA-EGIGEVQEIIDMCDFAVGLSRQLNGSIIPSERP--N 145
Query: 66 YTLRE---PIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAK 122
+ + E P+G+VG I +NFP + AL G ++ K A TPLI + L
Sbjct: 146 HMMMEVWNPLGIVGVITAFNFPCAVLGWNACIALVCGNCVVWKGAPTTPLITIAMTKL-- 203
Query: 123 LAGV------PDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLK 176
+A V P + G G G AIA I VSFTGS+ VG ++Q +
Sbjct: 204 VAEVLEKNNLPGAIFTSFCG-GAEIGEAIAKDTRIPLVSFTGSSKVG-LMVQQTVNARFG 261
Query: 177 PVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLV 236
LEL G + +++ DD D+ A L + G+ C R+ + E IYD+ ++L+
Sbjct: 262 KCLLELSGNNAIIVMDDADIQLAVRSVLFAAVGTAGQRCTTCRRLLLHESIYDDVLEQLL 321
Query: 237 EKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIGKKGYYIEP 296
K +GDP + GP + IE K +G +LTGG I +G +++P
Sbjct: 322 TVYKQVKIGDPLEKGTLLGPLHTPESKKNFEKGIEIIKSQGGKILTGGSAIESEGNFVQP 381
Query: 297 TIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVS 356
TI ++ D + K E+FGPV+ +MKFKT+EEAI+ N+ GL++ I T+
Sbjct: 382 TI-VEISPDADVVKEELFGPVLYVMKFKTLEEAIEINNSVPQGLSSSIFTR--------- 431
Query: 357 RSIRAGII--WINCYFAFDSDC----------------PYGGYKMSGFGRDCGLESLHNY 398
I WI SDC +GG K +G GR+ G +S Y
Sbjct: 432 ---NPETIFKWIG---PLGSDCGIVNVNIPTNGAEIGGAFGGEKATGGGREAGSDSWKQY 485
Query: 399 LQ 400
++
Sbjct: 486 MR 487
|
Length = 508 |
| >gnl|CDD|143441 cd07123, ALDH_F4-17_P5CDH, Delta(1)-pyrroline-5-carboxylate dehydrogenase, ALDH families 4 and 17 | Back alignment and domain information |
|---|
Score = 155 bits (395), Expect = 2e-42
Identities = 97/337 (28%), Positives = 158/337 (46%), Gaps = 36/337 (10%)
Query: 73 GVVGHIIPWNF-------PTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAG 125
G V + P+NF PAL G ++ KP++ L + + AG
Sbjct: 172 GFVYAVSPFNFTAIGGNLAGA-------PALM-GNVVLWKPSDTAVLSNYLVYKILEEAG 223
Query: 126 VPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATS-----NLKPVSL 180
+P GV+N VPG GP G + + + + FTGST + + + + +
Sbjct: 224 LPPGVINFVPGDGPVVGDTVLASPHLAGLHFTGSTPTFKSLWKQIGENLDRYRTYPRIVG 283
Query: 181 ELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAK 240
E GGK+ L+ DV++ + G +G+ C A+SR YV E ++ E +++L+E+ K
Sbjct: 284 ETGGKNFHLVHPSADVDSLVTATVRGAFEYQGQKCSAASRAYVPESLWPEVKERLLEELK 343
Query: 241 AWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKRE-GATLLTGGKPIGKKGYYIEPTIF 299
+GDP D + G +D+K FDRI YI+H K + A ++ GGK GY++EPT+
Sbjct: 344 EIKMGDPDDFSNFMGAVIDEKAFDRIKGYIDHAKSDPEAEIIAGGKCDDSVGYFVEPTVI 403
Query: 300 --TNVTEDMLIAKNEIFGPVMALM-----KFKTVEEAIKSANNTRYGLAAGIMTKDLNVA 352
T+ ++ EIFGPV+ + F+ E + + + Y L I +D
Sbjct: 404 ETTDPKHKLM--TEEIFGPVLTVYVYPDSDFEETLELVDTT--SPYALTGAIFAQDRKAI 459
Query: 353 NTVSRSIR--AGIIWIN--CYFAFDSDCPYGGYKMSG 385
+ ++R AG +IN A P+GG + SG
Sbjct: 460 REATDALRNAAGNFYINDKPTGAVVGQQPFGGARASG 496
|
Delta(1)-pyrroline-5-carboxylate dehydrogenase (EC=1.5.1.12 ), families 4 and 17: a proline catabolic enzyme of the aldehyde dehydrogenase (ALDH) protein superfamily. Delta(1)-pyrroline-5-carboxylate dehydrogenase (P5CDH), also known as ALDH4A1 in humans, is a mitochondrial homodimer involved in proline degradation and catalyzes the NAD + -dependent conversion of P5C to glutamate. This is a necessary step in the pathway interconnecting the urea and tricarboxylic acid cycles. The preferred substrate is glutamic gamma-semialdehyde, other substrates include succinic, glutaric and adipic semialdehydes. Also included in this CD is the Aldh17 Drosophila melanogaster (Q9VUC0) P5CDH and similar sequences. Length = 522 |
| >gnl|CDD|233324 TIGR01236, D1pyr5carbox1, delta-1-pyrroline-5-carboxylate dehydrogenase, group 1 | Back alignment and domain information |
|---|
Score = 146 bits (370), Expect = 5e-39
Identities = 119/403 (29%), Positives = 186/403 (46%), Gaps = 23/403 (5%)
Query: 2 LKFADLI--EEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKM 59
LK ADL+ AE+LA L K A++ + + R+ A A +++ +
Sbjct: 98 LKAADLLSGPYRAEILAAT-MLGQSKTVYQAEIDAVAELIDFFRFNAKYARELYEQQPIS 156
Query: 60 SRALQGYTLREPI-GVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFA 118
+ T P+ G V I P+NF + +PAL G T+I KP++ L
Sbjct: 157 APGEWNRTEYRPLEGFVYAISPFNFTAIAGNLAGAPALM-GNTVIWKPSDTAMLSNYLVM 215
Query: 119 HLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATS----- 173
+ + AG+P GV+N VPG GP + + D+ + FTGST + + + A +
Sbjct: 216 RILEEAGLPPGVINFVPGDGPLVSDTVLADPDLAGIHFTGSTPTFKHLWKQVAQNLDRYH 275
Query: 174 NLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEK 233
N + E GGK ++ DV + G +G+ C A SR+YV ++ F+
Sbjct: 276 NFPRIVGETGGKDFHVVHPSADVEHVVSGTIRGAFEYQGQKCSACSRLYVPHSLWPRFKG 335
Query: 234 KLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKR--EGATLLTGGKPIGKKG 291
+L+ + VGDP D G +D+K F +I+ YIEH K T+L GGK G
Sbjct: 336 RLLAELSRVKVGDPDDFGTFMGAVIDEKSFAKIVKYIEHAKSDPSALTILAGGKYDDSVG 395
Query: 292 YYIEPTIFTNVTEDMLIAKNEIFGPVMALM-----KFKTVEEAIKSANNTRYGLAAGIMT 346
Y++EPT+ + + K EIFGPV+ + K+K + + + S T YGL +
Sbjct: 396 YFVEPTVVESKDPQEPLMKEEIFGPVLTVYVYPDDKYKEILDLVDST--TSYGLTGAVFA 453
Query: 347 KDLNVANTVSRSIR--AGIIWIN--CYFAFDSDCPYGGYKMSG 385
KD + + +R AG +IN A P+GG + SG
Sbjct: 454 KDRDAILEADKVLRFAAGNFYINDKPTGAVVGQQPFGGARASG 496
|
This model represents one of two related branches of delta-1-pyrroline-5-carboxylate dehydrogenase. The two branches are not as closely related to each other as some aldehyde dehydrogenases are to this branch, and separate models are built for this reason. The enzyme is the second of two in the degradation of proline to glutamate [Energy metabolism, Amino acids and amines]. Length = 532 |
| >gnl|CDD|143395 cd06534, ALDH-SF, NAD(P)+-dependent aldehyde dehydrogenase superfamily | Back alignment and domain information |
|---|
Score = 141 bits (357), Expect = 3e-38
Identities = 51/110 (46%), Positives = 69/110 (62%), Gaps = 1/110 (0%)
Query: 297 TIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVS 356
T+ +V DM IA+ EIFGPV+ +++FK EEAI AN+T YGL AG+ T+DLN A V+
Sbjct: 257 TVLVDVDPDMPIAQEEIFGPVLPVIRFKDEEEAIALANDTEYGLTAGVFTRDLNRALRVA 316
Query: 357 RSIRAGIIWINCYFAFDSD-CPYGGYKMSGFGRDCGLESLHNYLQVKSVV 405
+RAG ++IN P+GG K SG GR+ G L Y + K+VV
Sbjct: 317 ERLRAGTVYINDSSIGVGPEAPFGGVKNSGIGREGGPYGLEEYTRTKTVV 366
|
The aldehyde dehydrogenase superfamily (ALDH-SF) of NAD(P)+-dependent enzymes, in general, oxidize a wide range of endogenous and exogenous aliphatic and aromatic aldehydes to their corresponding carboxylic acids and play an important role in detoxification. Besides aldehyde detoxification, many ALDH isozymes possess multiple additional catalytic and non-catalytic functions such as participating in metabolic pathways, or as binding proteins, or osmoregulants, to mention a few. The enzyme has three domains, a NAD(P)+ cofactor-binding domain, a catalytic domain, and a bridging domain; and the active enzyme is generally either homodimeric or homotetrameric. The catalytic mechanism is proposed to involve cofactor binding, resulting in a conformational change and activation of an invariant catalytic cysteine nucleophile. The cysteine and aldehyde substrate form an oxyanion thiohemiacetal intermediate resulting in hydride transfer to the cofactor and formation of a thioacylenzyme intermediate. Hydrolysis of the thioacylenzyme and release of the carboxylic acid product occurs, and in most cases, the reduced cofactor dissociates from the enzyme. The evolutionary phylogenetic tree of ALDHs appears to have an initial bifurcation between what has been characterized as the classical aldehyde dehydrogenases, the ALDH family (ALDH) and extended family members or aldehyde dehydrogenase-like (ALDH-L) proteins. The ALDH proteins are represented by enzymes which share a number of highly conserved residues necessary for catalysis and cofactor binding and they include such proteins as retinal dehydrogenase, 10-formyltetrahydrofolate dehydrogenase, non-phosphorylating glyceraldehyde 3-phosphate dehydrogenase, delta(1)-pyrroline-5-carboxylate dehydrogenases, alpha-ketoglutaric semialdehyde dehydrogenase, alpha-aminoadipic semialdehyde dehydrogenase, coniferyl aldehyde dehydrogenase and succinate-semialdehyde dehydrogenase. Included in this larger group are all human, Arabidopsis, Tortula, fungal, protozoan, and Drosophila ALDHs identified in families ALDH1 through ALDH22 with the exception of families ALDH18, ALDH19, and ALDH20 which are present in the ALDH-like group. The ALDH-like group is represented by such proteins as gamma-glutamyl phosphate reductase, LuxC-like acyl-CoA reductase, and coenzyme A acylating aldehyde dehydrogenase. All of these proteins have a conserved cysteine that aligns with the catalytic cysteine of the ALDH group. Length = 367 |
| >gnl|CDD|236989 PRK11809, putA, trifunctional transcriptional regulator/proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Score = 144 bits (366), Expect = 2e-37
Identities = 121/385 (31%), Positives = 191/385 (49%), Gaps = 48/385 (12%)
Query: 5 ADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAG-AADKIHGEVLKMSRAL 63
ADL+E + L L +AGK S A + ++ A + LRYYAG D +
Sbjct: 714 ADLMEAQMQTLMGLLVREAGKTFSNA-IAEVREAVDFLRYYAGQVRDDFDND-------- 764
Query: 64 QGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKL 123
T R P+G V I PWNFP +F +V+ ALAAG +++ KPAEQTPLIA +
Sbjct: 765 ---THR-PLGPVVCISPWNFPLAIFTGQVAAALAAGNSVLAKPAEQTPLIAAQAVRILLE 820
Query: 124 AGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAAT---SNLKPVSL 180
AGVP GV+ ++PG G T GAA+ + + V FTGST+V R + + A +P+ L
Sbjct: 821 AGVPAGVVQLLPGRGETVGAALVADARVRGVMFTGSTEVARLLQRNLAGRLDPQGRPIPL 880
Query: 181 --ELGGKSPLLIFD----------DVDVNTAADMALLGILFNKGEICVASSRVYVQEGIY 228
E GG++ +I D DV + +A D A G+ C A + +Q+ +
Sbjct: 881 IAETGGQNA-MIVDSSALTEQVVADV-LASAFDSA--------GQRCSALRVLCLQDDVA 930
Query: 229 DEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIG 288
D K L +G+P + GP +D + I +I+ + +G + +
Sbjct: 931 DRTLKMLRGAMAECRMGNPDRLSTDIGPVIDAEAKANIERHIQAMRAKGRPVFQAARENS 990
Query: 289 ---KKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFK--TVEEAIKSANNTRYGLAAG 343
+ G ++ PT+ + D L K E+FGPV+ ++++ ++E I+ N + YGL G
Sbjct: 991 EDWQSGTFVPPTLIELDSFDEL--KREVFGPVLHVVRYNRNQLDELIEQINASGYGLTLG 1048
Query: 344 IMTK-DLNVANTVSRSIRAGIIWIN 367
+ T+ D +A V+ S G +++N
Sbjct: 1049 VHTRIDETIAQ-VTGSAHVGNLYVN 1072
|
Length = 1318 |
| >gnl|CDD|165847 PLN02203, PLN02203, aldehyde dehydrogenase | Back alignment and domain information |
|---|
Score = 140 bits (354), Expect = 5e-37
Identities = 114/354 (32%), Positives = 171/354 (48%), Gaps = 35/354 (9%)
Query: 70 EPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVP-- 127
EP+GVV WNFP + + A+AAG +++KP+E P + + A A +P
Sbjct: 107 EPLGVVLIFSSWNFPIGLSLEPLIGAIAAGNAVVLKPSELAPATSAFLA-----ANIPKY 161
Query: 128 --DGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGK 185
+ V+ G GP G + H DK+ FTGS VGR +M AAA +L PV+LELGGK
Sbjct: 162 LDSKAVKVIEG-GPAVGEQLLQH-KWDKIFFTGSPRVGRIIMTAAA-KHLTPVALELGGK 218
Query: 186 SPLLIFDDVDVNTAADMALLGILFNK-----GEICVASSRVYVQEG---IYDEFEKKLVE 237
P I D + + +A+ I+ K G+ C+A V V+E I E K ++
Sbjct: 219 CP-CIVDSLSSSRDTKVAVNRIVGGKWGSCAGQACIAIDYVLVEERFAPILIELLKSTIK 277
Query: 238 KAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIGKKGYYIEPT 297
K + A ++KK F R+ + ++ R A+++ GG I +K +IEPT
Sbjct: 278 KFFGENPRESKSMA----RILNKKHFQRLSNLLKD-PRVAASIVHGGS-IDEKKLFIEPT 331
Query: 298 IFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLN-----VA 352
I N D I EIFGP++ ++ K +E++I N+ LA T + ++
Sbjct: 332 ILLNPPLDSDIMTEEIFGPLLPIITVKKIEDSIAFINSKPKPLAIYAFTNNEKLKRRILS 391
Query: 353 NTVSRSIRAGIIWINCYFAFDSDCPYGGYKMSGFGRDCGLESLHNYLQVKSVVT 406
T S S+ I +A DS P+GG SGFGR G S + K+V+
Sbjct: 392 ETSSGSVTFNDAIIQ--YACDS-LPFGGVGESGFGRYHGKYSFDTFSHEKAVLR 442
|
Length = 484 |
| >gnl|CDD|237016 PRK11903, PRK11903, aldehyde dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 121 bits (306), Expect = 3e-30
Identities = 97/347 (27%), Positives = 147/347 (42%), Gaps = 43/347 (12%)
Query: 34 DIPGAANTLRYYAGAADKI-------HGEVLKMSR--ALQGYTLREPI-GVVGHIIPWNF 83
DI G TL YYA + GE +++ + A QG + P GV I +NF
Sbjct: 101 DIDGGIFTLGYYAKLGAALGDARLLRDGEAVQLGKDPAFQGQHVLVPTRGVALFINAFNF 160
Query: 84 PTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGV-PDGVLNVVPGFGPTAG 142
P + K +PAL AG +IVKPA T + AG+ P G L+VV G +
Sbjct: 161 PAWGLWEKAAPALLAGVPVIVKPATATAWLTQRMVKDVVAAGILPAGALSVVCG----SS 216
Query: 143 AAIASHMD-IDKVSFTGSTDVGRQ------VMQAAATSNLKPVSLELGGKSPLLIFDDVD 195
A + H+ D VSFTGS + V+Q + N++ SL S LL D
Sbjct: 217 AGLLDHLQPFDVVSFTGSAETAAVLRSHPAVVQRSVRVNVEADSL----NSALLGPDAAP 272
Query: 196 VNTAADMALLGIL----FNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPA 251
+ A D+ + ++ G+ C A R++V E +YD + L + VG+P +
Sbjct: 273 GSEAFDLFVKEVVREMTVKSGQKCTAIRRIFVPEALYDAVAEALAARLAKTTVGNPRNDG 332
Query: 252 VRQGPQVDKKQFDRILSYIEHGKREGATLLTGG---KPIGK---KGYYIEPTIFTNVTED 305
VR GP V + Q + + + R A +L G + + PT+ D
Sbjct: 333 VRMGPLVSRAQLAAVRAGLAA-LRAQAEVLFDGGGFALVDADPAVAACVGPTLL--GASD 389
Query: 306 MLIAK----NEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKD 348
A E+FGPV L+ ++ A+ A + L A + + D
Sbjct: 390 PDAATAVHDVEVFGPVATLLPYRDAAHALALARRGQGSLVASVYSDD 436
|
Length = 521 |
| >gnl|CDD|177831 PLN02174, PLN02174, aldehyde dehydrogenase family 3 member H1 | Back alignment and domain information |
|---|
Score = 110 bits (277), Expect = 1e-26
Identities = 98/344 (28%), Positives = 163/344 (47%), Gaps = 20/344 (5%)
Query: 70 EPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDG 129
EP+GVV I WN+P + V A++AG +++KP+E P + A L +
Sbjct: 111 EPLGVVLVISAWNYPFLLSIDPVIGAISAGNAVVLKPSELAPASSALLAKLLEQYLDSS- 169
Query: 130 VLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLL 189
+ VV G A + D K+ +TGS+ +GR +M AAA +L PV LELGGKSP++
Sbjct: 170 AVRVVEGAVTETTALLEQKWD--KIFYTGSSKIGRVIM-AAAAKHLTPVVLELGGKSPVV 226
Query: 190 IFDDVDVNTAADMALLGIL-FNKGEICVASSRVYVQEGIYDEFEKKLVEKAK----AWVV 244
+ D D+ + G N G+ C++ + + E+ K+++ K +
Sbjct: 227 VDSDTDLKVTVRRIIAGKWGCNNGQACISPDYILTTK----EYAPKVIDAMKKELETFYG 282
Query: 245 GDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIGKKGYYIEPTIFTNVTE 304
+P + + V+ FDR LS + K ++ GG+ ++ I PTI +V
Sbjct: 283 KNPME-SKDMSRIVNSTHFDR-LSKLLDEKEVSDKIVYGGEK-DRENLKIAPTILLDVPL 339
Query: 305 DMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSIRAGII 364
D LI EIFGP++ ++ +EE+ + LAA + T + + + ++ AG I
Sbjct: 340 DSLIMSEEIFGPLLPILTLNNLEESFDVIRSRPKPLAAYLFTHNKKLKERFAATVSAGGI 399
Query: 365 WIN---CYFAFDSDCPYGGYKMSGFGRDCGLESLHNYLQVKSVV 405
+N + A + P+GG SG G G S + K+V+
Sbjct: 400 VVNDIAVHLALHT-LPFGGVGESGMGAYHGKFSFDAFSHKKAVL 442
|
Length = 484 |
| >gnl|CDD|143446 cd07128, ALDH_MaoC-N, N-terminal domain of the monoamine oxidase C dehydratase | Back alignment and domain information |
|---|
Score = 106 bits (267), Expect = 4e-25
Identities = 109/404 (26%), Positives = 160/404 (39%), Gaps = 76/404 (18%)
Query: 1 MLK-FADLIEEHAEVLAVLEALDAG-KLHSWAKMGDIPGAANTLRYYAGAADK------- 51
MLK A + E E L L A + SW DI G TL YA +
Sbjct: 64 MLKALAKYLMERKEDLYALSAATGATRRDSWI---DIDGGIGTLFAYASLGRRELPNAHF 120
Query: 52 -IHGEVLKMSR--ALQGYTLREPI-GVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPA 107
+ G+V +S+ G + P GV HI +NFP K +PAL AG +IVKPA
Sbjct: 121 LVEGDVEPLSKDGTFVGQHILTPRRGVAVHINAFNFPVWGMLEKFAPALLAGVPVIVKPA 180
Query: 108 EQTPLIALYFAHLAKLAGV-PDGVLNVVPGFGPTAGAAIASHMDI-DKVSFTGSTDVGRQ 165
T + +G+ P+G L ++ G + + H+ D V+FTGS +
Sbjct: 181 TATAYLTEAVVKDIVESGLLPEGALQLICG----SVGDLLDHLGEQDVVAFTGSAATAAK 236
Query: 166 VMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAAD---MALLGI----------LFNK- 211
+ P ++ + N AD A+LG LF K
Sbjct: 237 L-----------------RAHPNIVARSIRFNAEADSLNAAILGPDATPGTPEFDLFVKE 279
Query: 212 ---------GEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQ 262
G+ C A R +V E D + L + VVGDP VR GP V ++Q
Sbjct: 280 VAREMTVKAGQKCTAIRRAFVPEARVDAVIEALKARLAKVVVGDPRLEGVRMGPLVSREQ 339
Query: 263 FDRILSYIEHGKREGATLLTGGKPI-------GKKGYYIEPTIFTNVTEDMLIAKN---- 311
+ + + + A ++ GG +KG + PT+ + +D A
Sbjct: 340 REDVRAAVAT-LLAEAEVVFGGPDRFEVVGADAEKGAFFPPTLL--LCDDPDAATAVHDV 396
Query: 312 EIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTV 355
E FGPV LM + ++ EAI+ A R L A ++T D A +
Sbjct: 397 EAFGPVATLMPYDSLAEAIELAARGRGSLVASVVTNDPAFAREL 440
|
The N-terminal domain of the MaoC dehydratase, a monoamine oxidase regulatory protein. Orthologs of MaoC include PaaZ (Escherichia coli) and PaaN (Pseudomonas putida), which are putative ring-opening enzymes of the aerobic phenylacetic acid (PA) catabolic pathway. The C-terminal domain of MaoC has sequence similarity to enoyl-CoA hydratase. Also included in this CD is a novel Burkholderia xenovorans LB400 ALDH of the aerobic benzoate oxidation (box) pathway. This pathway involves first the synthesis of a CoA thio-esterified aromatic acid, with subsequent dihydroxylation and cleavage steps, yielding the CoA thio-esterified aliphatic aldehyde, 3,4-dehydroadipyl-CoA semialdehyde, which is further converted into its corresponding CoA acid by the Burkholderia LB400 ALDH. Length = 513 |
| >gnl|CDD|143403 cd07084, ALDH_KGSADH-like, ALDH subfamily: NAD(P)+-dependent alpha-ketoglutaric semialdehyde dehydrogenases and plant delta(1)-pyrroline-5-carboxylate dehydrogenase, ALDH family 12-like | Back alignment and domain information |
|---|
Score = 102 bits (256), Expect = 6e-24
Identities = 88/406 (21%), Positives = 148/406 (36%), Gaps = 46/406 (11%)
Query: 29 WAKMGDIPGAANTLRYYA--GAADKIH---GEVLKMSRALQGYTLREPIGVVGHIIPWNF 83
W +I G LR A + +I G L Q + R P G V I +NF
Sbjct: 53 WMFAENICGDQVQLRARAFVIYSYRIPHEPGNHLGQGLKQQSHGYRWPYGPVLVIGAFNF 112
Query: 84 PTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAG-VPDGVLNVVPGFGPTAG 142
P + ++++ ALA G +IVKP ++ L AG +P + ++ G G T
Sbjct: 113 PLWIPLLQLAGALAMGNPVIVKPHTAVSIVMQIMVRLLHYAGLLPPEDVTLINGDGKT-M 171
Query: 143 AAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDV------ 196
A+ H + V FTGS+ V ++ A + + LEL G + ++ D
Sbjct: 172 QALLLHPNPKMVLFTGSSRVAEKLALDAKQA---RIYLELAGFNWKVLGPDAQAVDYVAW 228
Query: 197 NTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGP 256
DM G+ C A S ++V E + + LVEK KA + + +
Sbjct: 229 QCVQDMTA-----CSGQKCTAQSMLFVPE---NWSKTPLVEKLKALLARRKLEDLL---- 276
Query: 257 QVDKKQFDRILSYIEHGKREGATLLTGGKPIGKK-------GYYIEPTIFTNVTEDMLIA 309
+ Q L+ I H + ++L K G + +F + E +
Sbjct: 277 -LGPVQTFTTLAMIAHMENLLGSVLLFSGKELKNHSIPSIYGACVASALFVPIDEILKTY 335
Query: 310 K---NEIFGPVMALMKFKTVEEAIKSANNTRY--GLAAGIM-TKDLNVANTVSRSIRAGI 363
+ EIFGP ++++K + A+ R L A I + + + AG
Sbjct: 336 ELVTEEIFGPFAIVVEYKKDQLALVLELLERMHGSLTAAIYSNDPIFLQELIGNLWVAGR 395
Query: 364 IWINCYF---AFDSDCPYGGYKMSGFGRD-CGLESLHNYLQVKSVV 405
+ + GG G G E++ + +
Sbjct: 396 TYAILRGRTGVAPNQNHGGGPAADPRGAGIGGPEAIKLVWRCHAEQ 441
|
ALDH subfamily which includes the NAD(P)+-dependent, alpha-ketoglutaric semialdehyde dehydrogenases (KGSADH, EC 1.2.1.26); plant delta(1)-pyrroline-5-carboxylate dehydrogenase (P5CDH, EC=1.5.1.12 ), ALDH family 12; the N-terminal domain of the MaoC (monoamine oxidase C) dehydratase regulatory protein; and orthologs of MaoC, PaaZ and PaaN, which are putative ring-opening enzymes of the aerobic phenylacetic acid catabolic pathway. Length = 442 |
| >gnl|CDD|131331 TIGR02278, PaaN-DH, phenylacetic acid degradation protein paaN | Back alignment and domain information |
|---|
Score = 94.1 bits (234), Expect = 9e-21
Identities = 93/375 (24%), Positives = 143/375 (38%), Gaps = 30/375 (8%)
Query: 1 MLK-FADLIEEHAEVLAVLEA-LDAGKLHSWAKMGDIPGAANTLRYYAGAADK------- 51
MLK A + E E L L A A + +W DI G TL Y+ +
Sbjct: 64 MLKALAQYLSERKEALYALAATTGATRRDNWV---DIDGGIGTLFTYSSLGRRELPDANL 120
Query: 52 -IHGEVLKMSR--ALQGYTLREPI-GVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPA 107
E +S+ + QG + P GV I +NFP K +PA AG + KPA
Sbjct: 121 IPEDEFEPLSKDGSFQGRHILTPKGGVAVQINAFNFPVWGLLEKFAPAFLAGVPTLAKPA 180
Query: 108 EQTPLIALYFAHLAKLAG-VPDGVLNVVPGFGPTAGAAIASHMDI-DKVSFTGSTDVGRQ 165
T +A +G +P+G L ++ G +AG + H+D D V+FTGS +
Sbjct: 181 TPTAYVAEALVRTMVESGLLPEGSLQLICG---SAGD-LLDHLDHRDVVAFTGSAATADR 236
Query: 166 V-MQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNK-----GEICVASS 219
+ + E + ++ +D + + + G+ C A
Sbjct: 237 LRAHPNVLERGIRFNAEADSLNAAILGEDATPDEPEFDLFAQEIVRELTIKAGQKCTAIR 296
Query: 220 RVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGAT 279
RV V + + + K L + V+GDP + V GP V +Q + + + GA
Sbjct: 297 RVIVPKALLEAVLKALQARLAKVVLGDPREEGVDMGPLVSLEQRADVEAAVAALLAAGAE 356
Query: 280 LLTGGKPIGKKGYYIEPTIFTNVTEDM-LIAKNEIFGPVMALMKFKTVEEAIKSANNTRY 338
+ GG P G + PT+ + E FGPV + EA + A
Sbjct: 357 VRLGG-PGRLDGAFFPPTLLLAEDPWAGAVHATEAFGPVATFFPYGDRAEAARLAARGGG 415
Query: 339 GLAAGIMTKDLNVAN 353
L A + T D A
Sbjct: 416 SLVATLATSDPEEAR 430
|
This enzyme is proposed to act in the ring-opening step of phenylacetic acid degradation which follows ligation of the acid with coenzyme A (by PaaF) and hydroxylation by a multicomponent non-heme iron hydroxylase complex (PaaGHIJK). Gene symbols have been standardized in. This enzyme is related to aldehyde dehydrogenases and has domains which are members of the pfam00171 and pfam01575 families. This family includes paaN genes from Pseudomonas, Sinorhizobium, Rhodopseudomonas, Escherichia, Deinococcus and Corynebacterium. Another homology family (TIGR02288) includes several other species. Length = 663 |
| >gnl|CDD|236931 PRK11563, PRK11563, bifunctional aldehyde dehydrogenase/enoyl-CoA hydratase; Provisional | Back alignment and domain information |
|---|
Score = 91.1 bits (227), Expect = 1e-19
Identities = 119/420 (28%), Positives = 166/420 (39%), Gaps = 100/420 (23%)
Query: 1 MLK-FADLIEEHAEVLAVLEALD-AGKLHSWAKMGDIPGAANTLRYYAGAA------DKI 52
MLK A + E E L L A A + SW DI G TL YA D +
Sbjct: 68 MLKALAKYLLERKEELYALSAQTGATRRDSWI---DIEGGIGTLFTYASKGRRELPNDTV 124
Query: 53 H--GEVLKMSRALQG-------YTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMI 103
GEV +S+ G T E GV HI +NFP K++PA AG I
Sbjct: 125 LVEGEVEPLSK--GGTFAGRHILTPLE--GVAVHINAFNFPVWGMLEKLAPAFLAGVPAI 180
Query: 104 VKPAEQTPLIALYFAHLAKLA--------GVPDGVLNVVPGFGPTAGAAIASHMDI-DKV 154
VKPA T A+L + +P+G L ++ G +AG + H+D D V
Sbjct: 181 VKPATAT-------AYLTEAVVRLIVESGLLPEGALQLICG---SAGD-LLDHLDGQDVV 229
Query: 155 SFTGSTDVGRQVMQAAATSN-LKPVSLELGGKSPLLIFDDVDVNTAAD---MALLGI--- 207
+FTGS AAT+ L+ P ++ + V AD A+LG
Sbjct: 230 TFTGS----------AATAQKLR--------AHPNVVANSVPFTAEADSLNAAILGPDAT 271
Query: 208 -------LFNK----------GEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDP 250
LF K G+ C A R V + D + L + VVGDP
Sbjct: 272 PGTPEFDLFVKEVVREMTVKAGQKCTAIRRAIVPRALVDAVIEALRARLAKVVVGDPRLE 331
Query: 251 AVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGK----PIG---KKGYYIEPTIFTNVT 303
VR G +Q + + + A ++ GG +G +KG + PT+
Sbjct: 332 GVRMGALASLEQREDVREKVAALLAA-AEIVFGGPDSFEVVGADAEKGAFFPPTLLYC-- 388
Query: 304 EDMLIAKN----EIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSI 359
+D L A E FGPV LM + ++EAI+ A + L A ++T D VA +
Sbjct: 389 DDPLEAPAVHDVEAFGPVSTLMPYDDLDEAIELAARGKGSLVASLVTADPEVARELVLGA 448
|
Length = 675 |
| >gnl|CDD|143447 cd07129, ALDH_KGSADH, Alpha-Ketoglutaric Semialdehyde Dehydrogenase | Back alignment and domain information |
|---|
Score = 78.0 bits (193), Expect = 1e-15
Identities = 67/253 (26%), Positives = 101/253 (39%), Gaps = 24/253 (9%)
Query: 95 ALAAGCTMIVK--PA--EQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMD 150
ALAAGC ++VK PA + L+A + G+P GV +++ G G G A+ H
Sbjct: 131 ALAAGCPVVVKAHPAHPGTSELVARAIRAALRATGLPAGVFSLLQGGGREVGVALVKHPA 190
Query: 151 IDKVSFTGSTDVGRQVMQAAATSNL-KPVSLELGGKSPLLIFDDVDVNTAADMA--LLG- 206
I V FTGS GR + AAA P ELG +P+ I +A +G
Sbjct: 191 IKAVGFTGSRRGGRALFDAAAARPEPIPFYAELGSVNPVFILPGALAERGEAIAQGFVGS 250
Query: 207 ILFNKGEICVASSRVYVQEGI-YDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDR 265
+ G+ C V V G D F L E A P + + + + +
Sbjct: 251 LTLGAGQFCTNPGLVLVPAGPAGDAFIAALAEALAAAPAQTMLTPGIAEAYR---QGVEA 307
Query: 266 ILSYIEHGKREGATLLTGGKPIGKKGYYIEPTIFTNVTEDMLIAK----NEIFGPVMALM 321
+ + G +L GG + G PT+F V +A E+FGP ++
Sbjct: 308 LAA------APGVRVLAGG-AAAEGGNQAAPTLFK-VDAAAFLADPALQEEVFGPASLVV 359
Query: 322 KFKTVEEAIKSAN 334
++ E + A
Sbjct: 360 RYDDAAELLAVAE 372
|
Alpha-Ketoglutaric Semialdehyde (KGSA) Dehydrogenase (KGSADH, EC 1.2.1.26) catalyzes the NAD(P)+-dependent conversion of KGSA to alpha-ketoglutarate. This CD contains such sequences as those seen in Azospirillum brasilense, KGSADH-II (D-glucarate/D-galactarate-inducible) and KGSADH-III (hydroxy-L-proline-inducible). Both show similar high substrate specificity for KGSA and different coenzyme specificity; KGSADH-II is NAD+-dependent and KGSADH-III is NADP+-dependent. Also included in this CD is the NADP(+)-dependent aldehyde dehydrogenase from Vibrio harveyi which catalyzes the oxidation of long-chain aliphatic aldehydes to acids. Length = 454 |
| >gnl|CDD|143396 cd07077, ALDH-like, NAD(P)+-dependent aldehyde dehydrogenase-like (ALDH-like) family | Back alignment and domain information |
|---|
Score = 59.2 bits (143), Expect = 1e-09
Identities = 51/232 (21%), Positives = 78/232 (33%), Gaps = 25/232 (10%)
Query: 39 ANTLRYYAGAADKIHGEVLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAA 98
+T R + I +L + + Y PIGV HI+P P + + +A
Sbjct: 70 IDTERGITASVGHIQDVLLPDN--GETYVRAFPIGVTMHILPSTNPLSGITSALR-GIAT 126
Query: 99 GCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIA----SHMDIDKV 154
I +P P L A ++ + P +A SH ID +
Sbjct: 127 RNQCIFRPHPSAPFTN-RALALLFQAADAAHGPKILVLYVPHPSDELAEELLSHPKIDLI 185
Query: 155 SFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEI 214
TG D V A S PV G SP+++ + D A+ F+
Sbjct: 186 VATGGRDA---VDAAVKHSPHIPVIGFGAGNSPVVVDETADEERASGSVHDSKFFD-QNA 241
Query: 215 CVASSRVYVQEGIYD----EFEKKLVE---------KAKAWVVGDPFDPAVR 253
C + +YV + + D EF+ KLV K + FD
Sbjct: 242 CASEQNLYVVDDVLDPLYEEFKLKLVVEGLKVPQETKPLSKETTPSFDDEAL 293
|
The aldehyde dehydrogenase-like (ALDH-like) group of the ALDH superfamily of NAD(P)+-dependent enzymes which, in general, oxidize a wide range of endogenous and exogenous aliphatic and aromatic aldehydes to their corresponding carboxylic acids and play an important role in detoxification. This group includes families ALDH18, ALDH19, and ALDH20 and represents such proteins as gamma-glutamyl phosphate reductase, LuxC-like acyl-CoA reductase, and coenzyme A acylating aldehyde dehydrogenase. All of these proteins have a conserved cysteine that aligns with the catalytic cysteine of the ALDH group. Length = 397 |
| >gnl|CDD|143444 cd07126, ALDH_F12_P5CDH, Delta(1)-pyrroline-5-carboxylate dehydrogenase, ALDH family 12 | Back alignment and domain information |
|---|
Score = 54.0 bits (130), Expect = 6e-08
Identities = 85/326 (26%), Positives = 139/326 (42%), Gaps = 42/326 (12%)
Query: 64 QGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKL 123
Q R P G V I P+NFP + +++ AL G ++K + ++ F L L
Sbjct: 135 QSSGYRWPYGPVAIITPFNFPLEIPALQLMGALFMGNKPLLKVDSKVSVVMEQFLRLLHL 194
Query: 124 AGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELG 183
G+P ++++ GPT I + FTGS+ V ++ A + K V LE
Sbjct: 195 CGMPATDVDLIHSDGPTMN-KILLEANPRMTLFTGSSKVAERL---ALELHGK-VKLEDA 249
Query: 184 GKSPLLIFDDV-DVNTAADMALLGILFNKGEICVASSRVY-----VQEGIYDEFEKKLVE 237
G ++ DV DV+ A G+ C A S ++ VQ GI D+ K L E
Sbjct: 250 GFDWKILGPDVSDVDYVAWQCDQDAYACSGQKCSAQSILFAHENWVQAGILDKL-KALAE 308
Query: 238 KAKA--WVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPI---GKKGY 292
+ K +G P + + D++L+ GA +L GGKP+
Sbjct: 309 QRKLEDLTIG----PVLTWTTERILDHVDKLLAI------PGAKVLFGGKPLTNHSIPSI 358
Query: 293 Y--IEPTIFTNVTEDMLIAKN------EIFGPVMALMKFKTVEE--AIKSANNTRYGLAA 342
Y EPT E++ I +N E+FGP + ++K + +++ L A
Sbjct: 359 YGAYEPTAVFVPLEEIAIEENFELVTTEVFGPFQVVTEYKDEQLPLVLEALERMHAHLTA 418
Query: 343 GIMTKDLN-----VANTVSRSIRAGI 363
+++ D+ +ANTV+ + AGI
Sbjct: 419 AVVSNDIRFLQEVLANTVNGTTYAGI 444
|
Delta(1)-pyrroline-5-carboxylate dehydrogenase (P5CDH, EC=1.5.1.12), family 12: a proline catabolic enzyme of the aldehyde dehydrogenase (ALDH) protein superfamily. P5CDH is a mitochondrial enzyme involved in proline degradation and catalyzes the NAD + -dependent conversion of P5C to glutamate. The P5CDH, ALDH12A1 gene, in Arabidopsis, has been identified as an osmotic-stress-inducible ALDH gene. This CD contains both Viridiplantae and Alveolata P5CDH sequences. Length = 489 |
| >gnl|CDD|143400 cd07081, ALDH_F20_ACDH_EutE-like, Coenzyme A acylating aldehyde dehydrogenase (ACDH), Ethanolamine utilization protein EutE, and related proteins | Back alignment and domain information |
|---|
Score = 53.0 bits (127), Expect = 1e-07
Identities = 63/325 (19%), Positives = 115/325 (35%), Gaps = 50/325 (15%)
Query: 67 TLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKP----AEQTPLIALYFAHLAK 122
+ EPIGVV I P PT+ K +L ++I P + T A A
Sbjct: 91 IIAEPIGVVASITPSTNPTSTVIFKSLISLKTRNSIIFSPHPRAKKVTQRAATLLLQAAV 150
Query: 123 LAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLEL 182
AG P+ ++ + + I + TG G V++AA +S KP
Sbjct: 151 AAGAPENLIGWIDNPSIELAQRLMKFPGIGLLLATG----GPAVVKAAYSSG-KPAIGVG 205
Query: 183 GGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAW 242
G +P++I + D+ A + F+ G IC + V V + +YDE +L E A+
Sbjct: 206 AGNTPVVIDETADIKRAVQSIVKSKTFDNGVICASEQSVIVVDSVYDEV-MRLFEGQGAY 264
Query: 243 VVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIGKKGYYIEPTIFTNV 302
+ ++ + Q IL + +G+ Y I V
Sbjct: 265 KL---------TAEELQQVQ-PVILKNGD----------VNRDIVGQDAYKIAAAAGLKV 304
Query: 303 TEDMLI-------------AKNEIFGPVMALMKFKTVEEAIKSA----NNTRYGLAAGIM 345
++ I +E PV+A+ + +A A G + +
Sbjct: 305 PQETRILIGEVTSLAEHEPFAHEKLSPVLAMYRAANFADADAKALALKLEGGCGHTSAMY 364
Query: 346 TKDLNVANTVSR---SIRAGIIWIN 367
+ ++ +++ +++ N
Sbjct: 365 SDNIKAIENMNQFANAMKTSRFVKN 389
|
Coenzyme A acylating aldehyde dehydrogenase (ACDH), an NAD+ and CoA-dependent acetaldehyde dehydrogenase, acetylating (EC=1.2.1.10), functions as a single enzyme (such as the Ethanolamine utilization protein, EutE, in Salmonella typhimurium) or as part of a multifunctional enzyme to convert acetaldehyde into acetyl-CoA. The E. coli aldehyde-alcohol dehydrogenase includes the functional domains, alcohol dehydrogenase (ADH), ACDH, and pyruvate-formate-lyase deactivase; and the Entamoeba histolytica aldehyde-alcohol dehydrogenase 2 (ALDH20A1) includes the functional domains ADH and ACDH, and may be critical enzymes in the fermentative pathway. Length = 439 |
| >gnl|CDD|143440 cd07122, ALDH_F20_ACDH, Coenzyme A acylating aldehyde dehydrogenase (ACDH), ALDH family 20-like | Back alignment and domain information |
|---|
Score = 50.2 bits (121), Expect = 1e-06
Identities = 81/325 (24%), Positives = 129/325 (39%), Gaps = 56/325 (17%)
Query: 70 EPIGVVGHIIPWNFP--TTMFFMKVSPALAAGCTMIVKP---AEQTPLIALYFAH-LAKL 123
EP+GV+ +IP P T +F K AL +I P A++ + A A
Sbjct: 94 EPVGVIAALIPSTNPTSTAIF--KALIALKTRNAIIFSPHPRAKKCSIEAAKIMREAAVA 151
Query: 124 AGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELG 183
AG P+G++ + + H D+D + TG M AA S+ KP +G
Sbjct: 152 AGAPEGLIQWIEEPSIELTQELMKHPDVDLILATGG-----PGMVKAAYSSGKPA---IG 203
Query: 184 ---GKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAK 240
G P I + D+ A +L F+ G IC + V V + IYDE +L ++
Sbjct: 204 VGPGNVPAYIDETADIKRAVKDIILSKTFDNGTICASEQSVIVDDEIYDEVRAEL-KRRG 262
Query: 241 AWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIGKKGYYIEPTIFT 300
A+ + + +K++ ++ L +G TL +GK I
Sbjct: 263 AYFLNEE-----------EKEKLEKALF------DDGGTL--NPDIVGKSAQKIAELAGI 303
Query: 301 NVTED--MLIAKNEIFG-----------PVMALMKFKTVEEAIKSAN-NTRYGLA---AG 343
V ED +L+A+ G PV+A + + EEA++ A YG A A
Sbjct: 304 EVPEDTKVLVAEETGVGPEEPLSREKLSPVLAFYRAEDFEEALEKARELLEYGGAGHTAV 363
Query: 344 IMTKDLNVANTVSRSIRAGIIWINC 368
I + D V + + I +N
Sbjct: 364 IHSNDEEVIEEFALRMPVSRILVNT 388
|
Coenzyme A acylating aldehyde dehydrogenase (ACDH, EC=1.2.1.10), an NAD+ and CoA-dependent acetaldehyde dehydrogenase, functions as a single enzyme (such as the Ethanolamine utilization protein, EutE, in Salmonella typhimurium) or as part of a multifunctional enzyme to convert acetaldehyde into acetyl-CoA . The E. coli aldehyde-alcohol dehydrogenase includes the functional domains, alcohol dehydrogenase (ADH), ACDH, and pyruvate-formate-lyase deactivase; and the Entamoeba histolytica aldehyde-alcohol dehydrogenase 2 (ALDH20A1) includes the functional domains ADH and ACDH and may be critical enzymes in the fermentative pathway. Length = 436 |
| >gnl|CDD|143439 cd07121, ALDH_EutE, Ethanolamine utilization protein EutE-like | Back alignment and domain information |
|---|
Score = 44.1 bits (105), Expect = 8e-05
Identities = 70/315 (22%), Positives = 122/315 (38%), Gaps = 44/315 (13%)
Query: 65 GYTLRE--PIGVVGHIIPWNFPT-TMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHL- 120
G TL E P GV+G I P PT T+ +S LAAG ++ P ++ Y L
Sbjct: 89 GLTLVEYAPFGVIGAITPSTNPTETIINNSIS-MLAAGNAVVFNPHPGAKKVSAYAVELI 147
Query: 121 ---AKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKP 177
AG PD ++ V + +H DI+ + TG V + + + K
Sbjct: 148 NKAIAEAGGPDNLVVTVEEPTIETTNELMAHPDINLLVVTGGPAVVKAALSSG-----KK 202
Query: 178 VSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVE 237
G P+++ + D+ AA + G F+ C+A V + + D + +
Sbjct: 203 AIGAGAGNPPVVVDETADIEKAARDIVQGASFDNNLPCIAEKEVIAVDSVADYLIAAM-Q 261
Query: 238 KAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIGKKGYYI--- 294
+ A+V+ D Q ++ +L +GAT K +GK I
Sbjct: 262 RNGAYVLNDE---------QAEQLLEVVLL------TNKGATPNK--KWVGKDASKILKA 304
Query: 295 --------EPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGL--AAGI 344
I +D E P++ +++ K +EAI+ A +G A I
Sbjct: 305 AGIEVPADIRLIIVETDKDHPFVVEEQMMPILPVVRVKNFDEAIELAVELEHGNRHTAII 364
Query: 345 MTKDLNVANTVSRSI 359
+K++ ++R++
Sbjct: 365 HSKNVENLTKMARAM 379
|
Coenzyme A acylating aldehyde dehydrogenase (ACDH), an NAD+ and CoA-dependent acetaldehyde dehydrogenase, acetylating (EC=1.2.1.10), converts acetaldehyde into acetyl-CoA. This CD is limited to such monofunctional enzymes as the Ethanolamine utilization protein, EutE, in Salmonella typhimurium. Mutations in eutE abolish the ability to utilize ethanolamine as a carbon source. Length = 429 |
| >gnl|CDD|237515 PRK13805, PRK13805, bifunctional acetaldehyde-CoA/alcohol dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 41.7 bits (99), Expect = 7e-04
Identities = 80/324 (24%), Positives = 130/324 (40%), Gaps = 55/324 (16%)
Query: 70 EPIGVVGHIIPWNFP--TTMFFMKVSPALAAGCTMIVKP---AEQTPLIA---LYFAHLA 121
EP+GV+ I P P T +F K AL +I A+++ + A + A A
Sbjct: 107 EPVGVIAGITPTTNPTSTAIF--KALIALKTRNPIIFSFHPRAQKSSIAAAKIVLDA--A 162
Query: 122 KLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLE 181
AG P ++ + A+ +H I + TG M AA S+ KP +L
Sbjct: 163 VAAGAPKDIIQWIEEPSVELTNALMNHPGIALILATGGPG-----MVKAAYSSGKP-ALG 216
Query: 182 LG-GKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAK 240
+G G P I D+ A + LL F+ G IC + V V + IYDE +++
Sbjct: 217 VGAGNVPAYIDKTADIKRAVNDILLSKTFDNGMICASEQAVIVDDEIYDEVKEEFASH-G 275
Query: 241 AWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIGKKGYYIEPTIFT 300
A+ + + + K+ ++ + E+G +G+ Y I
Sbjct: 276 AYFL-----------NKKELKKLEKFIFGKENGALNADI-------VGQSAYKIAEMAGF 317
Query: 301 NVTED--MLIA------KNEIFG-----PVMALMKFKTVEEAIKSANN-TRYGLA---AG 343
V ED +LIA ++E PV+A+ K K E+A++ A +G A
Sbjct: 318 KVPEDTKILIAEVKGVGESEPLSHEKLSPVLAMYKAKDFEDAVEKAEKLVEFGGLGHTAV 377
Query: 344 IMTKDLNVANTVSRSIRAGIIWIN 367
I T D + ++A I +N
Sbjct: 378 IYTNDDELIKEFGLRMKACRILVN 401
|
Length = 862 |
| >gnl|CDD|131570 TIGR02518, EutH_ACDH, acetaldehyde dehydrogenase (acetylating) | Back alignment and domain information |
|---|
Score = 40.2 bits (94), Expect = 0.001
Identities = 36/173 (20%), Positives = 64/173 (36%), Gaps = 13/173 (7%)
Query: 70 EPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKP----AEQTPLIALYFAHLAKLAG 125
P+GVV +IP PT+ K ++ A ++ P + A+ AG
Sbjct: 103 VPVGVVAGLIPSTNPTSTAIYKTLISIKARNAIVFSPHPNAKKCIIETVKLMRKAAEEAG 162
Query: 126 VPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGK 185
P+G + + + + D + TG + M AA S+ P G
Sbjct: 163 APEGAIGCITVPTIEGTNELMKNKDTSLILATGG-----EAMVKAAYSSGTPAIGVGPGN 217
Query: 186 SPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQ----EGIYDEFEKK 234
P I +V A + F+ G IC + + V+ + + +E +K+
Sbjct: 218 GPAYIERTANVKKAVRDIIDSKTFDNGTICASEQSIIVEECNKDAVVEELKKQ 270
|
Length = 488 |
Conserved Domains Detected by HHsearch 
Original result of HHsearch against CDD database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 414 | |||
| KOG2450 | 501 | consensus Aldehyde dehydrogenase [Energy productio | 100.0 | |
| PLN02766 | 501 | coniferyl-aldehyde dehydrogenase | 100.0 | |
| PRK11241 | 482 | gabD succinate-semialdehyde dehydrogenase I; Provi | 100.0 | |
| COG1012 | 472 | PutA NAD-dependent aldehyde dehydrogenases [Energy | 100.0 | |
| PLN02466 | 538 | aldehyde dehydrogenase family 2 member | 100.0 | |
| PRK10090 | 409 | aldehyde dehydrogenase A; Provisional | 100.0 | |
| PLN02419 | 604 | methylmalonate-semialdehyde dehydrogenase [acylati | 100.0 | |
| KOG2451 | 503 | consensus Aldehyde dehydrogenase [Energy productio | 100.0 | |
| cd07140 | 486 | ALDH_F1L_FTFDH 10-formyltetrahydrofolate dehydroge | 100.0 | |
| PLN02174 | 484 | aldehyde dehydrogenase family 3 member H1 | 100.0 | |
| TIGR03374 | 472 | ABALDH 1-pyrroline dehydrogenase. Members of this | 100.0 | |
| cd07113 | 477 | ALDH_PADH_NahF Escherichia coli NAD+-dependent phe | 100.0 | |
| cd07142 | 476 | ALDH_F2BC Arabidosis aldehyde dehydrogenase family | 100.0 | |
| PLN02278 | 498 | succinic semialdehyde dehydrogenase | 100.0 | |
| PRK13968 | 462 | putative succinate semialdehyde dehydrogenase; Pro | 100.0 | |
| cd07141 | 481 | ALDH_F1AB_F2_RALDH1 NAD+-dependent retinal dehydro | 100.0 | |
| cd07117 | 475 | ALDH_StaphAldA1 Uncharacterized Staphylococcus aur | 100.0 | |
| cd07143 | 481 | ALDH_AldA_AN0554 Aspergillus nidulans aldehyde deh | 100.0 | |
| PRK09406 | 457 | gabD1 succinic semialdehyde dehydrogenase; Reviewe | 100.0 | |
| PRK13252 | 488 | betaine aldehyde dehydrogenase; Provisional | 100.0 | |
| cd07559 | 480 | ALDH_ACDHII_AcoD-like Ralstonia eutrophus NAD+-dep | 100.0 | |
| TIGR03216 | 481 | OH_muco_semi_DH 2-hydroxymuconic semialdehyde dehy | 100.0 | |
| cd07120 | 455 | ALDH_PsfA-ACA09737 Pseudomonas putida aldehyde deh | 100.0 | |
| TIGR01780 | 448 | SSADH succinate-semialdehyde dehydrogenase. SSADH | 100.0 | |
| PLN02467 | 503 | betaine aldehyde dehydrogenase | 100.0 | |
| cd07115 | 453 | ALDH_HMSADH_HapE Pseudomonas fluorescens 4-hydroxy | 100.0 | |
| cd07091 | 476 | ALDH_F1-2_Ald2-like ALDH subfamily: ALDH families | 100.0 | |
| cd07119 | 482 | ALDH_BADH-GbsA Bacillus subtilis NAD+-dependent be | 100.0 | |
| cd07100 | 429 | ALDH_SSADH1_GabD1 Mycobacterium tuberculosis succi | 100.0 | |
| PLN02315 | 508 | aldehyde dehydrogenase family 7 member | 100.0 | |
| cd07144 | 484 | ALDH_ALD2-YMR170C Saccharomyces cerevisiae aldehyd | 100.0 | |
| PRK13473 | 475 | gamma-aminobutyraldehyde dehydrogenase; Provisiona | 100.0 | |
| TIGR02299 | 488 | HpaE 5-carboxymethyl-2-hydroxymuconate semialdehyd | 100.0 | |
| cd07107 | 456 | ALDH_PhdK-like Nocardioides 2-carboxybenzaldehyde | 100.0 | |
| cd07097 | 473 | ALDH_KGSADH-YcbD Bacillus subtilis NADP+-dependent | 100.0 | |
| cd07110 | 456 | ALDH_F10_BADH Arabidopsis betaine aldehyde dehydro | 100.0 | |
| cd07089 | 459 | ALDH_CddD-AldA-like Rhodococcus ruber 6-oxolauric | 100.0 | |
| cd07118 | 454 | ALDH_SNDH Gluconobacter oxydans L-sorbosone dehydr | 100.0 | |
| cd07151 | 465 | ALDH_HBenzADH NADP+-dependent p-hydroxybenzaldehyd | 100.0 | |
| cd07112 | 462 | ALDH_GABALDH-PuuC Escherichia coli NADP+-dependent | 100.0 | |
| cd07090 | 457 | ALDH_F9_TMBADH NAD+-dependent 4-trimethylaminobuty | 100.0 | |
| cd07085 | 478 | ALDH_F6_MMSDH Methylmalonate semialdehyde dehydrog | 100.0 | |
| cd07145 | 456 | ALDH_LactADH_F420-Bios Methanocaldococcus jannasch | 100.0 | |
| cd07116 | 479 | ALDH_ACDHII-AcoD Ralstonia eutrophus NAD+-dependen | 100.0 | |
| cd07086 | 478 | ALDH_F7_AASADH-like NAD+-dependent alpha-aminoadip | 100.0 | |
| cd07124 | 512 | ALDH_PutA-P5CDH-RocA Delta(1)-pyrroline-5-carboxyl | 100.0 | |
| cd07109 | 454 | ALDH_AAS00426 Uncharacterized Saccharopolyspora sp | 100.0 | |
| cd07130 | 474 | ALDH_F7_AASADH NAD+-dependent alpha-aminoadipic se | 100.0 | |
| TIGR01804 | 467 | BADH glycine betaine aldehyde dehydrogenase. Betai | 100.0 | |
| PRK09847 | 494 | gamma-glutamyl-gamma-aminobutyraldehyde dehydrogen | 100.0 | |
| TIGR03250 | 472 | PhnAcAld_DH putative phosphonoacetaldehyde dehydro | 100.0 | |
| cd07148 | 455 | ALDH_RL0313 Uncharacterized ALDH ( RL0313) with si | 100.0 | |
| cd07106 | 446 | ALDH_AldA-AAD23400 Streptomyces aureofaciens putat | 100.0 | |
| cd07152 | 443 | ALDH_BenzADH NAD-dependent benzaldehyde dehydrogen | 100.0 | |
| TIGR01237 | 511 | D1pyr5carbox2 delta-1-pyrroline-5-carboxylate dehy | 100.0 | |
| cd07101 | 454 | ALDH_SSADH2_GabD2 Mycobacterium tuberculosis succi | 100.0 | |
| cd07088 | 468 | ALDH_LactADH-AldA Escherichia coli lactaldehyde de | 100.0 | |
| cd07123 | 522 | ALDH_F4-17_P5CDH Delta(1)-pyrroline-5-carboxylate | 100.0 | |
| TIGR01236 | 533 | D1pyr5carbox1 delta-1-pyrroline-5-carboxylate dehy | 100.0 | |
| cd07150 | 451 | ALDH_VaniDH_like Pseudomonas putida vanillin dehyd | 100.0 | |
| cd07114 | 457 | ALDH_DhaS Uncharacterized Candidatus pelagibacter | 100.0 | |
| cd07131 | 478 | ALDH_AldH-CAJ73105 Uncharacterized Candidatus kuen | 100.0 | |
| cd07139 | 471 | ALDH_AldA-Rv0768 Mycobacterium tuberculosis aldehy | 100.0 | |
| cd07102 | 452 | ALDH_EDX86601 Uncharacterized aldehyde dehydrogena | 100.0 | |
| cd07095 | 431 | ALDH_SGSD_AstD N-succinylglutamate 5-semialdehyde | 100.0 | |
| cd07138 | 466 | ALDH_CddD_SSP0762 Rhodococcus ruber 6-oxolauric ac | 100.0 | |
| cd07092 | 450 | ALDH_ABALDH-YdcW Escherichia coli NAD+-dependent g | 100.0 | |
| PRK09457 | 487 | astD succinylglutamic semialdehyde dehydrogenase; | 100.0 | |
| cd07094 | 453 | ALDH_F21_LactADH-like ALDH subfamily: NAD+-depende | 100.0 | |
| cd07083 | 500 | ALDH_P5CDH ALDH subfamily NAD+-dependent delta(1)- | 100.0 | |
| PF00171 | 462 | Aldedh: Aldehyde dehydrogenase family; InterPro: I | 100.0 | |
| PRK09407 | 524 | gabD2 succinic semialdehyde dehydrogenase; Reviewe | 100.0 | |
| PRK03137 | 514 | 1-pyrroline-5-carboxylate dehydrogenase; Provision | 100.0 | |
| cd07099 | 453 | ALDH_DDALDH Methylomonas sp. 4,4'-diapolycopene-di | 100.0 | |
| cd07146 | 451 | ALDH_PhpJ Streptomyces putative phosphonoformaldeh | 100.0 | |
| cd07111 | 480 | ALDH_F16 Aldehyde dehydrogenase family 16A1-like. | 100.0 | |
| cd07108 | 457 | ALDH_MGR_2402 Magnetospirillum NAD(P)+-dependent a | 100.0 | |
| cd07104 | 431 | ALDH_BenzADH-like ALDH subfamily: NAD(P)+-dependen | 100.0 | |
| PTZ00381 | 493 | aldehyde dehydrogenase family protein; Provisional | 100.0 | |
| PLN02203 | 484 | aldehyde dehydrogenase | 100.0 | |
| cd07137 | 432 | ALDH_F3FHI Plant aldehyde dehydrogenase family 3 m | 100.0 | |
| cd07147 | 452 | ALDH_F21_RNP123 Aldehyde dehydrogenase family 21A1 | 100.0 | |
| cd07093 | 455 | ALDH_F8_HMSADH Human aldehyde dehydrogenase family | 100.0 | |
| cd07103 | 451 | ALDH_F5_SSADH_GabD Mitochondrial succinate-semiald | 100.0 | |
| cd07136 | 449 | ALDH_YwdH-P39616 Bacillus subtilis aldehyde dehydr | 100.0 | |
| cd07105 | 432 | ALDH_SaliADH Salicylaldehyde dehydrogenase, DoxF-l | 100.0 | |
| cd07135 | 436 | ALDH_F14-YMR110C Saccharomyces cerevisiae aldehyde | 100.0 | |
| PLN00412 | 496 | NADP-dependent glyceraldehyde-3-phosphate dehydrog | 100.0 | |
| cd07133 | 434 | ALDH_CALDH_CalB Coniferyl aldehyde dehydrogenase-l | 100.0 | |
| cd07098 | 465 | ALDH_F15-22 Aldehyde dehydrogenase family 15A1 and | 100.0 | |
| TIGR01722 | 477 | MMSDH methylmalonic acid semialdehyde dehydrogenas | 100.0 | |
| TIGR03240 | 484 | arg_catab_astD succinylglutamic semialdehyde dehyd | 100.0 | |
| cd07125 | 518 | ALDH_PutA-P5CDH Delta(1)-pyrroline-5-carboxylate d | 100.0 | |
| cd07128 | 513 | ALDH_MaoC-N N-terminal domain of the monoamine oxi | 100.0 | |
| cd07134 | 433 | ALDH_AlkH-like Pseudomonas putida Aldehyde dehydro | 100.0 | |
| cd07149 | 453 | ALDH_y4uC Uncharacterized ALDH (y4uC) with similar | 100.0 | |
| TIGR02278 | 663 | PaaN-DH phenylacetic acid degradation protein paaN | 100.0 | |
| cd07082 | 473 | ALDH_F11_NP-GAPDH NADP+-dependent non-phosphorylat | 100.0 | |
| cd07132 | 443 | ALDH_F3AB Aldehyde dehydrogenase family 3 members | 100.0 | |
| PRK11903 | 521 | aldehyde dehydrogenase; Provisional | 100.0 | |
| TIGR01238 | 500 | D1pyr5carbox3 delta-1-pyrroline-5-carboxylate dehy | 100.0 | |
| PRK11904 | 1038 | bifunctional proline dehydrogenase/pyrroline-5-car | 100.0 | |
| cd07087 | 426 | ALDH_F3-13-14_CALDH-like ALDH subfamily: Coniferyl | 100.0 | |
| PRK11563 | 675 | bifunctional aldehyde dehydrogenase/enoyl-CoA hydr | 100.0 | |
| KOG2456 | 477 | consensus Aldehyde dehydrogenase [Energy productio | 100.0 | |
| PRK11809 | 1318 | putA trifunctional transcriptional regulator/proli | 100.0 | |
| cd07126 | 489 | ALDH_F12_P5CDH Delta(1)-pyrroline-5-carboxylate de | 100.0 | |
| cd07078 | 432 | ALDH NAD(P)+ dependent aldehyde dehydrogenase fami | 100.0 | |
| PRK11905 | 1208 | bifunctional proline dehydrogenase/pyrroline-5-car | 100.0 | |
| cd07129 | 454 | ALDH_KGSADH Alpha-Ketoglutaric Semialdehyde Dehydr | 100.0 | |
| cd07084 | 442 | ALDH_KGSADH-like ALDH subfamily: NAD(P)+-dependent | 100.0 | |
| KOG2454 | 583 | consensus Betaine aldehyde dehydrogenase [Energy p | 100.0 | |
| cd07121 | 429 | ALDH_EutE Ethanolamine utilization protein EutE-li | 100.0 | |
| TIGR02288 | 551 | PaaN_2 phenylacetic acid degradation protein paaN. | 100.0 | |
| cd07081 | 439 | ALDH_F20_ACDH_EutE-like Coenzyme A acylating aldeh | 100.0 | |
| PRK15398 | 465 | aldehyde dehydrogenase EutE; Provisional | 100.0 | |
| cd07127 | 549 | ALDH_PAD-PaaZ Phenylacetic acid degradation protei | 100.0 | |
| cd07079 | 406 | ALDH_F18-19_ProA-GPR Gamma-glutamyl phosphate redu | 100.0 | |
| cd07122 | 436 | ALDH_F20_ACDH Coenzyme A acylating aldehyde dehydr | 100.0 | |
| PRK00197 | 417 | proA gamma-glutamyl phosphate reductase; Provision | 100.0 | |
| TIGR02518 | 488 | EutH_ACDH acetaldehyde dehydrogenase (acetylating) | 100.0 | |
| PLN02418 | 718 | delta-1-pyrroline-5-carboxylate synthase | 100.0 | |
| PRK13805 | 862 | bifunctional acetaldehyde-CoA/alcohol dehydrogenas | 100.0 | |
| cd06534 | 367 | ALDH-SF NAD(P)+-dependent aldehyde dehydrogenase s | 100.0 | |
| cd07077 | 397 | ALDH-like NAD(P)+-dependent aldehyde dehydrogenase | 100.0 | |
| COG4230 | 769 | Delta 1-pyrroline-5-carboxylate dehydrogenase [Ene | 100.0 | |
| TIGR00407 | 398 | proA gamma-glutamyl phosphate reductase. The prosi | 100.0 | |
| KOG2455 | 561 | consensus Delta-1-pyrroline-5-carboxylate dehydrog | 100.0 | |
| TIGR01092 | 715 | P5CS delta l-pyrroline-5-carboxylate synthetase. T | 100.0 | |
| KOG2452 | 881 | consensus Formyltetrahydrofolate dehydrogenase [Nu | 100.0 | |
| KOG2453 | 507 | consensus Aldehyde dehydrogenase [Energy productio | 100.0 | |
| cd07080 | 422 | ALDH_Acyl-CoA-Red_LuxC Acyl-CoA reductase LuxC. Ac | 100.0 | |
| COG0014 | 417 | ProA Gamma-glutamyl phosphate reductase [Amino aci | 99.97 | |
| KOG4165 | 433 | consensus Gamma-glutamyl phosphate reductase [Amin | 99.89 | |
| PF05893 | 399 | LuxC: Acyl-CoA reductase (LuxC); InterPro: IPR0086 | 99.81 | |
| KOG2449 | 157 | consensus Methylmalonate semialdehyde dehydrogenas | 99.53 | |
| PF07368 | 215 | DUF1487: Protein of unknown function (DUF1487); In | 99.31 | |
| PRK11905 | 1208 | bifunctional proline dehydrogenase/pyrroline-5-car | 98.72 | |
| PF00815 | 412 | Histidinol_dh: Histidinol dehydrogenase; InterPro: | 97.95 | |
| COG0141 | 425 | HisD Histidinol dehydrogenase [Amino acid transpor | 97.67 | |
| PLN02926 | 431 | histidinol dehydrogenase | 97.61 | |
| TIGR00069 | 393 | hisD histidinol dehydrogenase. This model describe | 97.52 | |
| cd06572 | 390 | Histidinol_dh Histidinol dehydrogenase, HisD, E.C | 97.51 | |
| PRK00877 | 425 | hisD bifunctional histidinal dehydrogenase/ histid | 97.44 | |
| PRK13769 | 368 | histidinol dehydrogenase; Provisional | 97.41 | |
| PRK12447 | 426 | histidinol dehydrogenase; Reviewed | 97.26 | |
| PRK13770 | 416 | histidinol dehydrogenase; Provisional | 97.21 | |
| PRK11809 | 1318 | putA trifunctional transcriptional regulator/proli | 97.21 | |
| COG4230 | 769 | Delta 1-pyrroline-5-carboxylate dehydrogenase [Ene | 93.11 |
| >KOG2450 consensus Aldehyde dehydrogenase [Energy production and conversion] | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.2e-95 Score=700.10 Aligned_cols=413 Identities=59% Similarity=0.970 Sum_probs=399.5
Q ss_pred CHHHHHHHHHhHHHHHHHHHHHcCCChHHHhhccHHHHHHHHHHHHHhhhhhcCceeccccCccccccccCCcEEEEEcC
Q 015031 1 MLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMSRALQGYTLREPIGVVGHIIP 80 (414)
Q Consensus 1 L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p 80 (414)
|++++++++++++.|+.+.+.+.|||..+++..|+..+++.++|++.|+++.++..++.+.....+.+++|+|||+.|.|
T Consensus 88 L~~~Adlie~~~~~lA~~E~~d~GKp~~~a~~~Dl~~~~~~~ry~ag~ad~~~~~~~~~~~~~~~yt~~eP~GV~G~I~p 167 (501)
T KOG2450|consen 88 LRKLADLIEQDADVLAALEVLDNGKPYPEALVSDLPPAIDCFRYYAGWADKIHGSTIPTDGEFFAYTRREPIGVCGQIIP 167 (501)
T ss_pred HHHHHHHHHhhhHHHhhhcccccCCcchhhhhcCchhhhhHHHhhccchhhcccccCCCCCceEEEecCCcceeeeEecc
Confidence 68999999999999999999999999998877999999999999999998887776666666789999999999999999
Q ss_pred CCcChHhhHHHHHHHHhcCCeEEEecCCCChhHHHHHHHHHHHcCCCCCeEEEEcCCchhHHHHHHhCCCcCeEEEeCCH
Q 015031 81 WNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGST 160 (414)
Q Consensus 81 ~n~P~~~~~~~~~~ALaaGN~vv~kps~~~~~~~~~l~~~~~~aglp~g~v~~~~~~~~~~~~~l~~~~~~~~v~~tGs~ 160 (414)
||||+....|+++|||++||+||+||++++|+|+..++.++.++|+|+|++|+++|.|.+.+..|.+|++++.|.||||+
T Consensus 168 WN~Pllm~awKlaPALa~GNtvV~Kpae~tplsal~~~~l~~eaG~P~GVvNii~G~G~~aG~al~sH~dv~kiaFTGSt 247 (501)
T KOG2450|consen 168 WNFPLLMQAWKLAPALAAGNTVVLKPAEQTPLTALYLASLCKEAGFPPGVVNIVPGSGTTAGAALASHPDVDKVAFTGST 247 (501)
T ss_pred CchHHHHHHHhhhhHHhhCcEEEecCCCCCCchHHHHHHHhHHhcCCcceEEEccCCCchHHHHHhhCCCCceEEecCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhhCCCCceeeeCCCCCceeecCCCCHHHHHHHHHHHHhcccCCccccCcEEEEeCccHHHHHHHHHHHHh
Q 015031 161 DVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAK 240 (414)
Q Consensus 161 ~~~~~i~~~~~~~~~~~~~~e~gG~~~~iV~~dadl~~a~~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f~~~l~~~~~ 240 (414)
.+|+.|.+.++..++||+++|+|||+|.||++|||++.|++.+..+.|+|+||.|.+.+|+|||+++||+|+++++++..
T Consensus 248 ~~G~~I~~aaa~~n~K~vtLElGGKsp~Ivf~Dadld~av~~~~~~iF~nqGq~C~a~sR~~Vqe~iydefv~~~v~~a~ 327 (501)
T KOG2450|consen 248 PVGKEIMEAAAESNLKPVTLELGGKSPIIVFDDADLDLAVENAAFGIFFNQGQCCTAGSRVFVQESIYDEFVEKFVAAAK 327 (501)
T ss_pred cchhHHhhhhhhcCCceeccccCCCCcceEecccchHHHHHHHHHHhhcccccccccCceeEEechHHHHHHHHHHHHHh
Confidence 99999999988666899999999999999999999999999999999999999999999999999999999999999996
Q ss_pred c-cccCCCCCCCCCccccCCHHHHHHHHHHHHHhhhcCCeEeeCCcccCCCCceeeeEEEEeCCCCCcccccccccceEE
Q 015031 241 A-WVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIGKKGYYIEPTIFTNVTEDMLIAKNEIFGPVMA 319 (414)
Q Consensus 241 ~-~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~ 319 (414)
+ +++|||.++.+.+||.+++.++++|.+||+.++++|+++++||.+..+.|+|+.|||+.++.++|.+++||+||||+.
T Consensus 328 ~~~kvGdP~~~~~~qG~~i~~~q~ekI~~yi~~~k~eGa~l~~gG~~~g~~Gyfi~Ptv~~~v~~~m~i~~EEIFGPVv~ 407 (501)
T KOG2450|consen 328 KKLKVGDPFDEGTEQGPQISKTQYEKILGYIESGKKEGATLLCGGVRLGDKGYFIKPTVFTNVTDDMRIAKEEIFGPVVV 407 (501)
T ss_pred cccccCCCCCcccccccccCHHHHHHHHHHHHHHHhcCCEEEecCcccCCCceEECCeeccCCChhhhhhHhhccCceEE
Confidence 6 999999999999999999999999999999999999999999988778999999999999999999999999999999
Q ss_pred EeeeCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHHhccceeEEEECCcCCCCCCCCccCCCCCCCCCcchHHHHHhhh
Q 015031 320 LMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSIRAGIIWINCYFAFDSDCPYGGYKMSGFGRDCGLESLHNYL 399 (414)
Q Consensus 320 v~~~~~~~eai~~~n~~~~gl~~sv~s~d~~~~~~~~~~l~~g~v~vN~~~~~~~~~pfgG~~~sG~g~~~g~~~~~~~~ 399 (414)
|.+|++.||+|+++|++.|||++.|||+|.+.++++++++++|+||||+.....+..||||+|+||+||+.|.+++.+||
T Consensus 408 v~~F~t~eE~i~~AN~t~yGLAa~V~t~dl~~a~~va~~l~aGtVwiN~y~~~~~~~PfgG~K~SG~GRE~g~~~l~~yt 487 (501)
T KOG2450|consen 408 VLKFKTEEEVIERANNTTYGLAAGVFTKDLDKAHRVANALQAGTVWINCYNVFDAQVPFGGFKMSGIGRELGEYGLEAYT 487 (501)
T ss_pred EEecCcHHHHHHHhcCCcccceeeEeccChHHHHHHHHHhcCceEEEeccccccccCCccccccccCCccccHHHHhhcc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccEEEEeCCCCCC
Q 015031 400 QVKSVVTPIFNSPW 413 (414)
Q Consensus 400 ~~k~i~~~~~~~~~ 413 (414)
+.|+++++.+++.|
T Consensus 488 evKtv~v~~~~~~~ 501 (501)
T KOG2450|consen 488 EVKTVTVKLPQKNS 501 (501)
T ss_pred eeeEEEEeCCCCCC
Confidence 99999998876654
|
|
| >PLN02766 coniferyl-aldehyde dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-92 Score=720.44 Aligned_cols=414 Identities=83% Similarity=1.330 Sum_probs=391.1
Q ss_pred CHHHHHHHHHhHHHHHHHHHHHcCCChHHHhhccHHHHHHHHHHHHHhhhhhcCceeccccCccccccccCCcEEEEEcC
Q 015031 1 MLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMSRALQGYTLREPIGVVGHIIP 80 (414)
Q Consensus 1 L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p 80 (414)
|+++++.|++|+++|++++++|+|||..++...|+..+++.+++++..+++..++..+...+...+..++|+|||++|+|
T Consensus 88 L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~a~~~~~~~g~~~~~~~~~~~~~~~~P~GVV~~I~P 167 (501)
T PLN02766 88 MMKFADLIEEHIEELAALDTIDAGKLFALGKAVDIPAAAGLLRYYAGAADKIHGETLKMSRQLQGYTLKEPIGVVGHIIP 167 (501)
T ss_pred HHHHHHHHHHhHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCceeccCCCceEEEEeccceEEEEECC
Confidence 57899999999999999999999999987655699999999999998887665543332233456788999999999999
Q ss_pred CCcChHhhHHHHHHHHhcCCeEEEecCCCChhHHHHHHHHHHHcCCCCCeEEEEcCCchhHHHHHHhCCCcCeEEEeCCH
Q 015031 81 WNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGST 160 (414)
Q Consensus 81 ~n~P~~~~~~~~~~ALaaGN~vv~kps~~~~~~~~~l~~~~~~aglp~g~v~~~~~~~~~~~~~l~~~~~~~~v~~tGs~ 160 (414)
||||+...++++++||++||+||+|||+.+|.++..+.+++.++|+|+|++|++++++.+.+..|+.||++|.|.||||+
T Consensus 168 wN~P~~~~~~~~~~ALaaGN~VVlKPs~~tp~~~~~l~~~~~~aGlP~gvv~~v~g~~~~~~~~L~~~p~v~~V~FTGS~ 247 (501)
T PLN02766 168 WNFPSTMFFMKVAPALAAGCTMVVKPAEQTPLSALFYAHLAKLAGVPDGVINVVTGFGPTAGAAIASHMDVDKVSFTGST 247 (501)
T ss_pred CCChHHHHHHHHHHHHHcCCEEEEeCCCCchHHHHHHHHHHHhcCCCcCcEEEEecCchHHHHHHhcCCCCCEEEEECcH
Confidence 99999999999999999999999999999999999999999999999999999999877889999999999999999999
Q ss_pred HHHHHHHHHHhhCCCCceeeeCCCCCceeecCCCCHHHHHHHHHHHHhcccCCccccCcEEEEeCccHHHHHHHHHHHHh
Q 015031 161 DVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAK 240 (414)
Q Consensus 161 ~~~~~i~~~~~~~~~~~~~~e~gG~~~~iV~~dadl~~a~~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f~~~l~~~~~ 240 (414)
.+|+.|.+.++.++++|+++|+|||||+||++|||++.|++.+++++|+|+||.|++++|||||+++||+|+++|+++++
T Consensus 248 ~~G~~i~~~aa~~~l~~~~lElGGknp~iV~~dADl~~Aa~~i~~g~f~n~GQ~C~a~~ri~V~~si~d~f~~~l~~~~~ 327 (501)
T PLN02766 248 EVGRKIMQAAATSNLKQVSLELGGKSPLLIFDDADVDMAVDLALLGIFYNKGEICVASSRVYVQEGIYDEFVKKLVEKAK 327 (501)
T ss_pred HHHHHHHHHhhhcCCCeEEEECCCCCeEEECCCCCHHHHHHHHHHHHHhhcCCCCCCCeEEEEcHHHHHHHHHHHHHHHH
Confidence 99999999887457899999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccCCCCCCCCCccccCCHHHHHHHHHHHHHhhhcCCeEeeCCcccCCCCceeeeEEEEeCCCCCcccccccccceEEE
Q 015031 241 AWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIGKKGYYIEPTIFTNVTEDMLIAKNEIFGPVMAL 320 (414)
Q Consensus 241 ~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v 320 (414)
++++|+|.++++++||++++.++++++++|++++.+|+++++||......|+|++|||+.+++++|++++||+||||++|
T Consensus 328 ~l~~G~p~~~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~v~~gG~~~~~~g~~~~PTvl~~v~~~~~i~~eE~FGPVl~v 407 (501)
T PLN02766 328 DWVVGDPFDPRARQGPQVDKQQFEKILSYIEHGKREGATLLTGGKPCGDKGYYIEPTIFTDVTEDMKIAQDEIFGPVMSL 407 (501)
T ss_pred hccCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHhCCCEEEeCCCcCCCCCeEEeeEEEecCCCCChhhhCCccCceEEE
Confidence 99999999999999999999999999999999999999999999765457899999999999999999999999999999
Q ss_pred eeeCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHHhccceeEEEECCcCCCCCCCCccCCCCCCCCCcchHHHHHhhhc
Q 015031 321 MKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSIRAGIIWINCYFAFDSDCPYGGYKMSGFGRDCGLESLHNYLQ 400 (414)
Q Consensus 321 ~~~~~~~eai~~~n~~~~gl~~sv~s~d~~~~~~~~~~l~~g~v~vN~~~~~~~~~pfgG~~~sG~g~~~g~~~~~~~~~ 400 (414)
++|+|+||||+++|+++|||++||||+|.+.++++++++++|+|+||+.....+.+||||+|.||+|+++|.+|+++||+
T Consensus 408 ~~~~~~deai~~aN~~~~GL~a~Vft~d~~~a~~~~~~l~~G~v~iN~~~~~~~~~PfGG~k~SG~G~~~G~~~l~~ft~ 487 (501)
T PLN02766 408 MKFKTVEEAIKKANNTKYGLAAGIVTKDLDVANTVSRSIRAGTIWVNCYFAFDPDCPFGGYKMSGFGRDQGMDALDKYLQ 487 (501)
T ss_pred EEeCCHHHHHHHHhCCCCCceEEEECCCHHHHHHHHHhCCcceEEECCCCCCCCCCCcCCcccCcCCccchHHHHHHHhc
Confidence 99999999999999999999999999999999999999999999999987777789999999999999999999999999
Q ss_pred ccEEEEeCCCCCCC
Q 015031 401 VKSVVTPIFNSPWL 414 (414)
Q Consensus 401 ~k~i~~~~~~~~~~ 414 (414)
+|+++++..+.||+
T Consensus 488 ~k~v~~~~~~~~~~ 501 (501)
T PLN02766 488 VKSVVTPLYNSPWL 501 (501)
T ss_pred eEEEEEeccccccC
Confidence 99999999999996
|
|
| >PRK11241 gabD succinate-semialdehyde dehydrogenase I; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.9e-92 Score=713.46 Aligned_cols=405 Identities=38% Similarity=0.664 Sum_probs=381.4
Q ss_pred CHHHHHHHHHhHHHHHHHHHHHcCCChHHHhhccHHHHHHHHHHHHHhhhhhcCceeccc-cCccccccccCCcEEEEEc
Q 015031 1 MLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMS-RALQGYTLREPIGVVGHII 79 (414)
Q Consensus 1 L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~-~~~~~~~~~~P~Gvv~~i~ 79 (414)
|+++++.|++++++|++++++|+|||..++ ..|+..+++.+++++.++++..+...+.. .+...+.+++|+|||++|+
T Consensus 76 L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a-~~ev~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~~P~GVv~~I~ 154 (482)
T PRK11241 76 LRRWFNLMMEHQDDLARLMTLEQGKPLAEA-KGEISYAASFIEWFAEEGKRIYGDTIPGHQADKRLIVIKQPIGVTAAIT 154 (482)
T ss_pred HHHHHHHHHHhHHHHHHHHHHhcCCCHHHH-HHHHHHHHHHHHHHHHHHHHhcCcccccCCCCceEEEEEeeceEEEEEC
Confidence 578999999999999999999999999975 57999999999999988876554433321 2344678899999999999
Q ss_pred CCCcChHhhHHHHHHHHhcCCeEEEecCCCChhHHHHHHHHHHHcCCCCCeEEEEcCCchhHHHHHHhCCCcCeEEEeCC
Q 015031 80 PWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGS 159 (414)
Q Consensus 80 p~n~P~~~~~~~~~~ALaaGN~vv~kps~~~~~~~~~l~~~~~~aglp~g~v~~~~~~~~~~~~~l~~~~~~~~v~~tGs 159 (414)
|||||+...++++++||++||+||+|||+.+|.++..+.+++.++|+|+|++|+++|++.+.++.|+.||++|.|.||||
T Consensus 155 PwN~P~~~~~~~~~~ALaaGN~VVlKPs~~tp~~~~~l~~~~~~aglP~gvv~vv~g~~~~~~~~l~~~~~v~~v~FTGS 234 (482)
T PRK11241 155 PWNFPAAMITRKAGPALAAGCTMVLKPASQTPFSALALAELAIRAGIPAGVFNVVTGSAGAVGGELTSNPLVRKLSFTGS 234 (482)
T ss_pred CCcChHHHHHHHHHHHHHhCCEEEEECCCCChHHHHHHHHHHHHcCCCcccEEEEecCCchhHHHHhcCCCCCEEEEECc
Confidence 99999999999999999999999999999999999999999999999999999999977788999999999999999999
Q ss_pred HHHHHHHHHHHhhCCCCceeeeCCCCCceeecCCCCHHHHHHHHHHHHhcccCCccccCcEEEEeCccHHHHHHHHHHHH
Q 015031 160 TDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKA 239 (414)
Q Consensus 160 ~~~~~~i~~~~~~~~~~~~~~e~gG~~~~iV~~dadl~~a~~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f~~~l~~~~ 239 (414)
+++|+.|.+.++ ++++|+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|++++
T Consensus 235 ~~~G~~i~~~aa-~~l~~~~lElGGknp~IV~~dADld~aa~~i~~~~f~~aGQ~C~a~~ri~V~~~i~d~f~~~l~~~~ 313 (482)
T PRK11241 235 TEIGRQLMEQCA-KDIKKVSLELGGNAPFIVFDDADLDKAVEGALASKFRNAGQTCVCANRLYVQDGVYDRFAEKLQQAV 313 (482)
T ss_pred HHHHHHHHHHHH-hcCCcEEEECCCCCeEEEcCCCCHHHHHHHHHHHHHhcCCCCCccCeEEEEeHHHHHHHHHHHHHHH
Confidence 999999999988 8899999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hccccCCCCCCCCCccccCCHHHHHHHHHHHHHhhhcCCeEeeCCcccCCCCceeeeEEEEeCCCCCcccccccccceEE
Q 015031 240 KAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIGKKGYYIEPTIFTNVTEDMLIAKNEIFGPVMA 319 (414)
Q Consensus 240 ~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~ 319 (414)
+++++|+|.++++++||++++.+++++++++++++++|+++++||.....+|+|++|||+.+++++|++++||+||||++
T Consensus 314 ~~l~~G~p~~~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~vl~GG~~~~~~g~f~~Ptvl~~v~~~~~i~~eE~FGPVl~ 393 (482)
T PRK11241 314 SKLHIGDGLEKGVTIGPLIDEKAVAKVEEHIADALEKGARVVCGGKAHELGGNFFQPTILVDVPANAKVAKEETFGPLAP 393 (482)
T ss_pred hhCCCCCCCCCCCCcCCCCCHHHHHHHHHHHHHHHhCCCEEEecCCCCCCCCeEEeeEEEECCCCCChhhhCcCcCCEEE
Confidence 99999999999999999999999999999999999999999999976434689999999999999999999999999999
Q ss_pred EeeeCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHHhccceeEEEECCcCCCCCCCCccCCCCCCCCCcchHHHHHhhh
Q 015031 320 LMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSIRAGIIWINCYFAFDSDCPYGGYKMSGFGRDCGLESLHNYL 399 (414)
Q Consensus 320 v~~~~~~~eai~~~n~~~~gl~~sv~s~d~~~~~~~~~~l~~g~v~vN~~~~~~~~~pfgG~~~sG~g~~~g~~~~~~~~ 399 (414)
|++|+|+||||+++|+++|||++||||+|.+.++++++++++|.|+||++....+.+||||+|.||+|+++|.+|+++||
T Consensus 394 v~~~~~~~eai~~aN~s~~GL~a~Vft~d~~~a~~~~~~l~~G~v~iN~~~~~~~~~PfGG~k~SG~G~~~g~~g~~~ft 473 (482)
T PRK11241 394 LFRFKDEADVIAQANDTEFGLAAYFYARDLSRVFRVGEALEYGIVGINTGIISNEVAPFGGIKASGLGREGSKYGIEDYL 473 (482)
T ss_pred EEEeCCHHHHHHHhhCCCCCceEEEEcCCHHHHHHHHHHcCccEEEECCCCCCCCCCCcCCccccccCcccHHHHHHHhh
Confidence 99999999999999999999999999999999999999999999999998766667899999999999999999999999
Q ss_pred cccEEEEe
Q 015031 400 QVKSVVTP 407 (414)
Q Consensus 400 ~~k~i~~~ 407 (414)
+.|++++.
T Consensus 474 ~~k~v~~~ 481 (482)
T PRK11241 474 EIKYMCIG 481 (482)
T ss_pred cceEEEEe
Confidence 99998764
|
|
| >COG1012 PutA NAD-dependent aldehyde dehydrogenases [Energy production and conversion] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.9e-91 Score=701.57 Aligned_cols=404 Identities=50% Similarity=0.807 Sum_probs=381.9
Q ss_pred CHHHHHHHHHhHHHHHHHHHHHcCCChHHHhhccHHHHHHHHHHHHHhhhhhcCceeccccCccccccccCCcEEEEEcC
Q 015031 1 MLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMSRALQGYTLREPIGVVGHIIP 80 (414)
Q Consensus 1 L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p 80 (414)
|++++++|++|+++|++++++|+|||+.++ ..|+..+++.+++++..+++..+...+...+...+++++|+|||++|+|
T Consensus 64 L~~~a~~l~~~~~ela~~~~~e~Gk~i~ea-~~ei~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~P 142 (472)
T COG1012 64 LRRIADLLEARAEELAALITLETGKPISEA-RGEIARAADFIRYYAEEARRLEGETIPTDKGSKALVRREPLGVVGAITP 142 (472)
T ss_pred HHHHHHHHHHhHHHHHHHHHHHcCCCHHHH-HHHHHHHHHHHHHHHHHHHHhcCCccCCCCCcceEEEeecceEEEEECC
Confidence 579999999999999999999999999975 5679999999999999998776655333336788999999999999999
Q ss_pred CCcChHhhHHHHHHHHhcCCeEEEecCCCChhHHHHHHHHHHHcCCCCCeEEEEcCCchhHHHHHHhCCCcCeEEEeCCH
Q 015031 81 WNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGST 160 (414)
Q Consensus 81 ~n~P~~~~~~~~~~ALaaGN~vv~kps~~~~~~~~~l~~~~~~aglp~g~v~~~~~~~~~~~~~l~~~~~~~~v~~tGs~ 160 (414)
||||+...++++++||++||+||+|||+.+|+++..+++++.++|+|+|++|+++|++.+.++.|+.||++++|.||||+
T Consensus 143 wNfP~~~~~~k~apALaaGntVV~KPse~tp~sa~~l~~~~~~aglP~Gv~nvv~g~~~~~g~~l~~~p~v~~i~FTGSt 222 (472)
T COG1012 143 WNFPLALAAWKLAPALAAGNTVVLKPSEQTPLSALALAELAAEAGLPAGVLNVVTGGGAEVGDALVAHPDVDAISFTGST 222 (472)
T ss_pred CCCHHHHHHhhHHHHHHcCCEEEEECcccCcHHHHHHHHHHHHhCCCCCeEEEEeCCCchHHHHHhcCCCCCEEEEECCh
Confidence 99999999999999999999999999999999999999999999999999999999877799999999999999999999
Q ss_pred HHHHHHHHHHhhCCCCceeeeCCCCCceeecCCCCHHHHHHHHHHHHhcccCCccccCcEEEEeCccHHHHHHHHHHHHh
Q 015031 161 DVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAK 240 (414)
Q Consensus 161 ~~~~~i~~~~~~~~~~~~~~e~gG~~~~iV~~dadl~~a~~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f~~~l~~~~~ 240 (414)
.+|+.|.+.++ +++||+++|+|||||+||++|||++.|++.+++++|+|+||.|++++|+|||+++||+|+++|.++ +
T Consensus 223 ~~G~~i~~~Aa-~~~k~~~lELGGk~p~IV~~dAdl~~Av~~~~~g~f~n~GQ~C~a~~R~~V~~~v~d~f~~~l~~~-~ 300 (472)
T COG1012 223 AVGRAIAAAAA-ANLKPVTLELGGKSPAIVLEDADLDAAVDAAVFGAFFNAGQRCTAASRLIVHESVYDEFVERLVAR-A 300 (472)
T ss_pred HHHHHHHHHHh-hcCCcEEEECCCCCCeEECCCCCHHHHHHHHHHHHHhCCCCCccCCeEEEEehhhHHHHHHHHHHH-H
Confidence 99999999998 899999999999999999999999999999999999999999999999999999999999999999 6
Q ss_pred c-cccCCCCCCCCCccccCCHHHHHHHHHHHHHhhhcCCeEeeCCcccCCCCceeeeEEEEeCCCCCcccccccccceEE
Q 015031 241 A-WVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIGKKGYYIEPTIFTNVTEDMLIAKNEIFGPVMA 319 (414)
Q Consensus 241 ~-~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~ 319 (414)
+ +++||+.|+.+++||+++..++++++++|++++++|++++.||+.. . |+|++|||+.+++++|++++||+||||++
T Consensus 301 ~~l~~Gd~~d~~t~~Gpli~~~~~~~v~~~i~~a~~~G~~~~~Gg~~~-~-g~~~~PTv~~~v~~~~~i~~eEiFGPVl~ 378 (472)
T COG1012 301 ASLKVGDPLDPSTDLGPLISEEQLDRVEGYIEDAVAEGARLLAGGKRP-G-GYFVEPTILEGVTPDMRIAREEIFGPVLP 378 (472)
T ss_pred hcCCCCCCCCCCCccCCCCCHHHHHHHHHHHHHHHHcCCEEEeCCcCC-C-CeEECCEEEecCCCCChhhhccccCCceE
Confidence 5 9999989999999999999999999999999999999999999833 3 99999999999999999999999999999
Q ss_pred EeeeCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHHhccceeEEEECCcCC--CCCCCCccCCCCCCCCCcchHHHHHh
Q 015031 320 LMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSIRAGIIWINCYFA--FDSDCPYGGYKMSGFGRDCGLESLHN 397 (414)
Q Consensus 320 v~~~~~~~eai~~~n~~~~gl~~sv~s~d~~~~~~~~~~l~~g~v~vN~~~~--~~~~~pfgG~~~sG~g~~~g~~~~~~ 397 (414)
|++|+|+||||+++|+++|||+++|||+|...+.++++++++|+|+||+... ..+.+||||+|.||+|+++|.+++++
T Consensus 379 v~~~~~~dEAi~lAN~t~yGL~a~v~t~d~~~~~~~~~~l~aG~v~iN~~~~~~~~~~~PFGG~k~SG~G~~~g~~~~~~ 458 (472)
T COG1012 379 VIRFKDEEEAIELANDTEYGLAAAIFTRDLARAFRVARRLEAGMVGINDYTGGADIAYLPFGGVKQSGLGREGGKYGLEE 458 (472)
T ss_pred EEEeCCHHHHHHHHhCCCCCceEEEEcCCHHHHHHHHhcCCeeEEEECCCCCCCCCCCCCCCCcccccCCccchHHHHHH
Confidence 9999999999999999999999999999999999999999999999998853 44678999999999999999999999
Q ss_pred hhcccEEEEeCC
Q 015031 398 YLQVKSVVTPIF 409 (414)
Q Consensus 398 ~~~~k~i~~~~~ 409 (414)
|++.|++..+..
T Consensus 459 ~~~~k~v~~~~~ 470 (472)
T COG1012 459 FTEVKTVTIKLG 470 (472)
T ss_pred HhcceEEEEecC
Confidence 999999987653
|
|
| >PLN02466 aldehyde dehydrogenase family 2 member | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.6e-91 Score=713.02 Aligned_cols=414 Identities=57% Similarity=0.980 Sum_probs=391.6
Q ss_pred CHHHHHHHHHhHHHHHHHHHHHcCCChHHHhhccHHHHHHHHHHHHHhhhhhcCceeccccCccccccccCCcEEEEEcC
Q 015031 1 MLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMSRALQGYTLREPIGVVGHIIP 80 (414)
Q Consensus 1 L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p 80 (414)
|+++++.|++|+++|++++++|+|||..++...|+..+++.+++++.++++..+..++...+...+..++|+|||++|+|
T Consensus 125 L~~~a~~l~~~~~ela~~~~~e~GK~~~~a~~~Ev~~~~~~l~~~a~~~~~~~g~~~~~~~~~~~~~~~~P~GVV~~I~P 204 (538)
T PLN02466 125 LLRFADLLEKHNDELAALETWDNGKPYEQSAKAELPMFARLFRYYAGWADKIHGLTVPADGPHHVQTLHEPIGVAGQIIP 204 (538)
T ss_pred HHHHHHHHHHhHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCcccccCCCceEEEEEecceEEEEECC
Confidence 57899999999999999999999999997656799999999999999887766554443233456789999999999999
Q ss_pred CCcChHhhHHHHHHHHhcCCeEEEecCCCChhHHHHHHHHHHHcCCCCCeEEEEcCCchhHHHHHHhCCCcCeEEEeCCH
Q 015031 81 WNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGST 160 (414)
Q Consensus 81 ~n~P~~~~~~~~~~ALaaGN~vv~kps~~~~~~~~~l~~~~~~aglp~g~v~~~~~~~~~~~~~l~~~~~~~~v~~tGs~ 160 (414)
||||+...++++++||++||+||+|||+.+|.++..+.+++.++|+|+|++|++++++.+.+..|..||++|.|.||||+
T Consensus 205 wN~P~~l~~~~i~pALaaGN~VVlKPs~~tp~~~~~l~~ll~eaGlP~gvv~vv~g~~~~~~~~L~~~~~vd~V~FTGS~ 284 (538)
T PLN02466 205 WNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYAAKLLHEAGLPPGVLNVVSGFGPTAGAALASHMDVDKLAFTGST 284 (538)
T ss_pred CchHHHHHHHHHhHHHHcCCEEEeECCCCCcHHHHHHHHHHHhcCCCcccEEEEecCchhHHHHHhcCCCcCEEEEECCH
Confidence 99999999999999999999999999999999999999999999999999999999777889999999999999999999
Q ss_pred HHHHHHHHHHhhCCCCceeeeCCCCCceeecCCCCHHHHHHHHHHHHhcccCCccccCcEEEEeCccHHHHHHHHHHHHh
Q 015031 161 DVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAK 240 (414)
Q Consensus 161 ~~~~~i~~~~~~~~~~~~~~e~gG~~~~iV~~dadl~~a~~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f~~~l~~~~~ 240 (414)
.+|+.|.+.+++.+++|+++|+|||||+||++|||++.|++.+++++|+|+||.|++++++|||++++|+|+++|++++.
T Consensus 285 ~~G~~v~~~aa~~~l~pv~lElGGknp~iV~~dADl~~Aa~~i~~~~f~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~ 364 (538)
T PLN02466 285 DTGKIVLELAAKSNLKPVTLELGGKSPFIVCEDADVDKAVELAHFALFFNQGQCCCAGSRTFVHERVYDEFVEKAKARAL 364 (538)
T ss_pred HHHHHHHHHHHhcCCCcEEEEcCCCCeEEEcCCCCHHHHHHHHHHHHHhhcCCCcCcCcEEEEcHHHHHHHHHHHHHHHH
Confidence 99999999887447899999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccCCCCCCCCCccccCCHHHHHHHHHHHHHhhhcCCeEeeCCcccCCCCceeeeEEEEeCCCCCcccccccccceEEE
Q 015031 241 AWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIGKKGYYIEPTIFTNVTEDMLIAKNEIFGPVMAL 320 (414)
Q Consensus 241 ~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v 320 (414)
++++|+|.++++++||+++..+++++++++++++++|+++++||...++.|+|++|||+.+++++|++++||+||||++|
T Consensus 365 ~~~vG~p~~~~~~~Gpli~~~~~~~v~~~v~~a~~~Ga~v~~gg~~~~~~g~~i~Ptvl~~v~~d~~i~~eE~FGPVl~v 444 (538)
T PLN02466 365 KRVVGDPFKKGVEQGPQIDSEQFEKILRYIKSGVESGATLECGGDRFGSKGYYIQPTVFSNVQDDMLIAQDEIFGPVQSI 444 (538)
T ss_pred hccCCCCccCCCCCccCCCHHHHHHHHHHHHHHHHCCCEEEecCCcCCCCceEEEEEEEecCCCCCchhcCCccCcEEEE
Confidence 99999999999999999999999999999999999999999999875557899999999999999999999999999999
Q ss_pred eeeCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHHhccceeEEEECCcCCCCCCCCccCCCCCCCCCcchHHHHHhhhc
Q 015031 321 MKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSIRAGIIWINCYFAFDSDCPYGGYKMSGFGRDCGLESLHNYLQ 400 (414)
Q Consensus 321 ~~~~~~~eai~~~n~~~~gl~~sv~s~d~~~~~~~~~~l~~g~v~vN~~~~~~~~~pfgG~~~sG~g~~~g~~~~~~~~~ 400 (414)
++|+|+||||+++|+++|||++||||+|.+.++++++++++|.|+||++....+.+||||+|.||+|+++|++|+++|++
T Consensus 445 ~~~~d~deAi~~aN~~~~GL~a~VfT~d~~~a~~~~~~l~aG~v~IN~~~~~~~~~PfGG~k~SG~G~~~G~~gl~~ft~ 524 (538)
T PLN02466 445 LKFKDLDEVIRRANNTRYGLAAGVFTQNLDTANTLSRALRVGTVWVNCFDVFDAAIPFGGYKMSGIGREKGIYSLNNYLQ 524 (538)
T ss_pred EEeCCHHHHHHHHhCCCCCceEEEEcCCHHHHHHHHHhCCeeeEEECCCCCCCCCCCcCCCCcCccCcccHHHHHHHhcc
Confidence 99999999999999999999999999999999999999999999999887777789999999999999999999999999
Q ss_pred ccEEEEeCCCCCCC
Q 015031 401 VKSVVTPIFNSPWL 414 (414)
Q Consensus 401 ~k~i~~~~~~~~~~ 414 (414)
+|+++.++.+..|+
T Consensus 525 ~k~v~~~~~~~~~~ 538 (538)
T PLN02466 525 VKAVVTPLKNPAWL 538 (538)
T ss_pred eEEEEEeCCCCCCC
Confidence 99999999999996
|
|
| >PRK10090 aldehyde dehydrogenase A; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-90 Score=689.79 Aligned_cols=406 Identities=35% Similarity=0.595 Sum_probs=383.3
Q ss_pred CHHHHHHHHHhHHHHHHHHHHHcCCChHHHhhccHHHHHHHHHHHHHhhhhhcCceeccc-cCccccccccCCcEEEEEc
Q 015031 1 MLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMS-RALQGYTLREPIGVVGHII 79 (414)
Q Consensus 1 L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~-~~~~~~~~~~P~Gvv~~i~ 79 (414)
|+++++.|++|+++|++++++|+|||..++ ..|+..+++.+++++.++++..+...+.. .+...+++++|+|||++|+
T Consensus 1 L~~~a~~l~~~~~el~~~~~~e~Gk~~~ea-~~Ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~ 79 (409)
T PRK10090 1 LRKIAAGIRERASEISALIVEEGGKIQQLA-EVEVAFTADYIDYMAEWARRYEGEIIQSDRPGENILLFKRALGVTTGIL 79 (409)
T ss_pred CHHHHHHHHHCHHHHHHHHHHhcCCCHHHH-HHHHHHHHHHHHHHHHHHHHhcCcccCCCCCCceeEEEEecccEEEEEC
Confidence 789999999999999999999999999976 47999999999999999877655433222 3446788999999999999
Q ss_pred CCCcChHhhHHHHHHHHhcCCeEEEecCCCChhHHHHHHHHHHHcCCCCCeEEEEcCCchhHHHHHHhCCCcCeEEEeCC
Q 015031 80 PWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGS 159 (414)
Q Consensus 80 p~n~P~~~~~~~~~~ALaaGN~vv~kps~~~~~~~~~l~~~~~~aglp~g~v~~~~~~~~~~~~~l~~~~~~~~v~~tGs 159 (414)
|||||+...++++++||++||+||+|||+.+|.++..+.+++.++|+|+|++|++++++.+.+..|+.|+++|.|.||||
T Consensus 80 p~N~P~~~~~~~~~~ALaaGN~VvlKps~~~p~~~~~l~~~~~~aglP~gv~~~v~g~~~~~~~~l~~~~~v~~V~ftGs 159 (409)
T PRK10090 80 PWNFPFFLIARKMAPALLTGNTIVIKPSEFTPNNAIAFAKIVDEIGLPKGVFNLVLGRGETVGQELAGNPKVAMVSMTGS 159 (409)
T ss_pred CCchHHHHHHHHHHHHHHcCCEEEEECCCcChHHHHHHHHHHHHcCCCcccEEEEeCCChhHHHHHhcCCCcCEEEEECC
Confidence 99999999999999999999999999999999999999999999999999999999977788999999999999999999
Q ss_pred HHHHHHHHHHHhhCCCCceeeeCCCCCceeecCCCCHHHHHHHHHHHHhcccCCccccCcEEEEeCccHHHHHHHHHHHH
Q 015031 160 TDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKA 239 (414)
Q Consensus 160 ~~~~~~i~~~~~~~~~~~~~~e~gG~~~~iV~~dadl~~a~~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f~~~l~~~~ 239 (414)
+.+|+.|.+.++ .+++|+++|+|||||+||++|||++.|++.+++++|.|+||.|++++++|||++++|+|+++|++++
T Consensus 160 ~~~g~~v~~~aa-~~~~~~~lElgGk~p~iV~~dADld~aa~~iv~~~f~~~GQ~C~a~~rv~V~~~i~~~f~~~l~~~~ 238 (409)
T PRK10090 160 VSAGEKIMAAAA-KNITKVCLELGGKAPAIVMDDADLDLAVKAIVDSRVINSGQVCNCAERVYVQKGIYDQFVNRLGEAM 238 (409)
T ss_pred HHHHHHHHHHHH-hcCCeEEEECCCCCeEEEcCCCCHHHHHHHHHHHHHHhcCCCCCCCeEEEEcHHHHHHHHHHHHHHH
Confidence 999999999887 8899999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hccccCCCCCC-CCCccccCCHHHHHHHHHHHHHhhhcCCeEeeCCcccCCCCceeeeEEEEeCCCCCcccccccccceE
Q 015031 240 KAWVVGDPFDP-AVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIGKKGYYIEPTIFTNVTEDMLIAKNEIFGPVM 318 (414)
Q Consensus 240 ~~~~~g~~~~~-~~~~gpl~~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl 318 (414)
+++++|+|.++ ++++||++++.+++++++++++++++|+++++||......|+|++|||+.+++++|++++||+||||+
T Consensus 239 ~~~~~G~p~~~~~~~~gpli~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~~~g~~~~Ptvl~~v~~~~~i~~eE~FgPvl 318 (409)
T PRK10090 239 QAVQFGNPAERNDIAMGPLINAAALERVEQKVARAVEEGARVALGGKAVEGKGYYYPPTLLLDVRQEMSIMHEETFGPVL 318 (409)
T ss_pred HhcCCCCCCCcccCccccccCHHHHHHHHHHHHHHHHCCCEEEeCCCcCCCCCeEEecEEEeCCCCCCHHHhCCCCCceE
Confidence 99999999998 89999999999999999999999999999999998765568999999999999999999999999999
Q ss_pred EEeeeCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHHhccceeEEEECCcCCCCCCCCccCCCCCCCCCcchHHHHHhh
Q 015031 319 ALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSIRAGIIWINCYFAFDSDCPYGGYKMSGFGRDCGLESLHNY 398 (414)
Q Consensus 319 ~v~~~~~~~eai~~~n~~~~gl~~sv~s~d~~~~~~~~~~l~~g~v~vN~~~~~~~~~pfgG~~~sG~g~~~g~~~~~~~ 398 (414)
+|++|+|+||||+++|++++||++||||+|.+.++++++++++|.|+||+........||||+|.||+|+++|.+|+++|
T Consensus 319 ~v~~~~~~~eai~~~n~~~~gL~~~vft~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~pfGG~k~SG~G~~~g~~gl~~f 398 (409)
T PRK10090 319 PVVAFDTLEEAIAMANDSDYGLTSSIYTQNLNVAMKAIKGLKFGETYINRENFEAMQGFHAGWRKSGIGGADGKHGLHEY 398 (409)
T ss_pred EEEEECCHHHHHHHHhCCCCCceEEEEcCCHHHHHHHHHhCCcceEEECCCCCCCCCCCcCCcccccCCccchHHHHHHh
Confidence 99999999999999999999999999999999999999999999999999877566679999999999999999999999
Q ss_pred hcccEEEEeC
Q 015031 399 LQVKSVVTPI 408 (414)
Q Consensus 399 ~~~k~i~~~~ 408 (414)
|+.|++++++
T Consensus 399 ~~~k~v~~~~ 408 (409)
T PRK10090 399 LQTQVVYLQS 408 (409)
T ss_pred cceEEEEEec
Confidence 9999998754
|
|
| >PLN02419 methylmalonate-semialdehyde dehydrogenase [acylating] | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.5e-90 Score=703.80 Aligned_cols=404 Identities=34% Similarity=0.479 Sum_probs=378.3
Q ss_pred CHHHHHHHHHhHHHHHHHHHHHcCCChHHHhhccHHHHHHHHHHHHHhhhhhcCceecc-ccCccccccccCCcEEEEEc
Q 015031 1 MLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKM-SRALQGYTLREPIGVVGHII 79 (414)
Q Consensus 1 L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~~~~~~~~~~~~-~~~~~~~~~~~P~Gvv~~i~ 79 (414)
|+++++.|++|+++|++++++|+|||..++ ..|+..+++.+++++.++....+...+. ..+...+++++|+|||++|+
T Consensus 179 L~k~a~~L~~~~~ela~~~~~E~GKp~~ea-~~EV~~~i~~~~~~a~~a~~~~g~~~~~~~~~~~~~~~reP~GVV~~I~ 257 (604)
T PLN02419 179 MLKFQELIRKNMDKLAMNITTEQGKTLKDS-HGDIFRGLEVVEHACGMATLQMGEYLPNVSNGVDTYSIREPLGVCAGIC 257 (604)
T ss_pred HHHHHHHHHHhHHHHHHHHHHHhCCCHHHH-HHHHHHHHHHHHHHHHHHHHhhCCcccccCCCccceEEecCccEEEEEC
Confidence 578999999999999999999999999976 4699999999999999887665543332 13445678999999999999
Q ss_pred CCCcChHhhHHHHHHHHhcCCeEEEecCCCChhHHHHHHHHHHHcCCCCCeEEEEcCCchhHHHHHHhCCCcCeEEEeCC
Q 015031 80 PWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGS 159 (414)
Q Consensus 80 p~n~P~~~~~~~~~~ALaaGN~vv~kps~~~~~~~~~l~~~~~~aglp~g~v~~~~~~~~~~~~~l~~~~~~~~v~~tGs 159 (414)
|||||+...++++++||++||+||+|||+.+|.++..+++++.++|+|+|++|+++|++ +.++.|+.|+++|.|.||||
T Consensus 258 PwNfPl~l~~~~iapALaAGNtVVlKPSe~tp~ta~~l~~l~~eAGlP~GvvnvV~G~~-~~~~~L~~~~~Vd~V~FTGS 336 (604)
T PLN02419 258 PFNFPAMIPLWMFPVAVTCGNTFILKPSEKDPGASVILAELAMEAGLPDGVLNIVHGTN-DTVNAICDDEDIRAVSFVGS 336 (604)
T ss_pred CCccHHHHHHHHHHHHHHcCCEEEEeCCCCCcHHHHHHHHHHHHhCcCcceEEEEeCCh-HHHHHHHhCCCCCEEEEeCC
Confidence 99999999999999999999999999999999999999999999999999999999954 67889999999999999999
Q ss_pred HHHHHHHHHHHhhCCCCceeeeCCCCCceeecCCCCHHHHHHHHHHHHhcccCCccccCcEEEEeCccHHHHHHHHHHHH
Q 015031 160 TDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKA 239 (414)
Q Consensus 160 ~~~~~~i~~~~~~~~~~~~~~e~gG~~~~iV~~dadl~~a~~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f~~~l~~~~ 239 (414)
+++|+.|.+.++ .+++|+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||++ +|+|+++|++++
T Consensus 337 t~vG~~I~~~Aa-~~lk~v~LELGGknp~IV~~DADld~Aa~~iv~g~f~naGQ~C~A~~Rv~V~~~-~d~f~e~l~~~~ 414 (604)
T PLN02419 337 NTAGMHIYARAA-AKGKRIQSNMGAKNHGLVLPDANIDATLNALLAAGFGAAGQRCMALSTVVFVGD-AKSWEDKLVERA 414 (604)
T ss_pred hHHHHHHHHHHh-ccCCcEEEecCCCCeEEEcCCCCHHHHHHHHHHHHHhhCCCCcCCCCEEEEeCc-HHHHHHHHHHHH
Confidence 999999999987 889999999999999999999999999999999999999999999999999999 899999999999
Q ss_pred hccccCCCCCCCCCccccCCHHHHHHHHHHHHHhhhcCCeEeeCCccc----CCCCceeeeEEEEeCCCCCccccccccc
Q 015031 240 KAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPI----GKKGYYIEPTIFTNVTEDMLIAKNEIFG 315 (414)
Q Consensus 240 ~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ga~v~~gg~~~----~~~g~~~~Ptvl~~~~~~~~~~~~E~fg 315 (414)
+++++|+|.|+++++||++++.+++++.+++++|+++|+++++||... .++|+|++|||+.+++++|.+++||+||
T Consensus 415 ~~l~vG~p~d~~t~~GPlis~~~~~~v~~~i~~A~~~GAkvl~GG~~~~~~~~~~G~f~~PTVL~~v~~d~~i~~eEiFG 494 (604)
T PLN02419 415 KALKVTCGSEPDADLGPVISKQAKERICRLIQSGVDDGAKLLLDGRDIVVPGYEKGNFIGPTILSGVTPDMECYKEEIFG 494 (604)
T ss_pred HHhccCCCCCCCCCccCCCCHHHHHHHHHHHHHHHhcCCEEEeCCccccCCCCCCCeEEeeEEEeCCCCCCHHHcCCCcC
Confidence 999999999999999999999999999999999999999999999752 1369999999999999999999999999
Q ss_pred ceEEEeeeCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHHhccceeEEEECCcCC-CCCCCCccCCCCCCCC--CcchH
Q 015031 316 PVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSIRAGIIWINCYFA-FDSDCPYGGYKMSGFG--RDCGL 392 (414)
Q Consensus 316 Pvl~v~~~~~~~eai~~~n~~~~gl~~sv~s~d~~~~~~~~~~l~~g~v~vN~~~~-~~~~~pfgG~~~sG~g--~~~g~ 392 (414)
||++|++|+|+||||+++|+++|||++||||+|.+.+.++++++++|.|+||+... ..+.+||||+|.||+| +++|.
T Consensus 495 PVl~V~~~~~~dEAI~laN~s~yGLaasVfT~d~~~a~~~a~~l~aG~V~IN~~~~~~~~~~PFGG~k~SG~G~~~~~G~ 574 (604)
T PLN02419 495 PVLVCMQANSFDEAISIINKNKYGNGAAIFTSSGAAARKFQMDIEAGQIGINVPIPVPLPFFSFTGNKASFAGDLNFYGK 574 (604)
T ss_pred CEEEEEecCCHHHHHHHHhCCCCCcEEEEECCCHHHHHHHHHhCCeeeEEEcCCCCCCCCCCCcCCcCcCCCCCCcccHH
Confidence 99999999999999999999999999999999999999999999999999998743 3467899999999999 79999
Q ss_pred HHHHhhhcccEEEEeC
Q 015031 393 ESLHNYLQVKSVVTPI 408 (414)
Q Consensus 393 ~~~~~~~~~k~i~~~~ 408 (414)
+|+++|+++|+|+.+.
T Consensus 575 ~gl~~ft~~K~v~~~~ 590 (604)
T PLN02419 575 AGVDFFTQIKLVTQKQ 590 (604)
T ss_pred HHHHHhhCeEEEEEcc
Confidence 9999999999998764
|
|
| >KOG2451 consensus Aldehyde dehydrogenase [Energy production and conversion] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-90 Score=639.70 Aligned_cols=405 Identities=39% Similarity=0.671 Sum_probs=387.5
Q ss_pred CHHHHHHHHHhHHHHHHHHHHHcCCChHHHhhccHHHHHHHHHHHHHhhhhhcCceeccc-cCccccccccCCcEEEEEc
Q 015031 1 MLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMS-RALQGYTLREPIGVVGHII 79 (414)
Q Consensus 1 L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~-~~~~~~~~~~P~Gvv~~i~ 79 (414)
|+++.++|.+|.++|++++++|.|||+.| +..||.-+..+++||+..+++..++.++.. ......+.++|+||+++|+
T Consensus 89 Lrkwy~Li~en~ddLa~iiTlE~GKpL~e-A~gEv~y~a~f~eWyAeEA~RvyGdii~s~~~~rr~i~ikQPvGV~alIt 167 (503)
T KOG2451|consen 89 LRKWYELIMENKDDLATIITLENGKPLGE-AKGEVAYSAAFFEWYAEEARRVYGDIIPSLNPNRRLIVIKQPVGVVALIT 167 (503)
T ss_pred HHHHHHHHHhchHHHHHHHhhhcCCchhh-ccceeehhHHHHHHHHHHhhhhhccccCCCCCCceEEEEeccceeEEEec
Confidence 68999999999999999999999999997 579999999999999999999998876543 5567788999999999999
Q ss_pred CCCcChHhhHHHHHHHHhcCCeEEEecCCCChhHHHHHHHHHHHcCCCCCeEEEEcCC---chhHHHHHHhCCCcCeEEE
Q 015031 80 PWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGF---GPTAGAAIASHMDIDKVSF 156 (414)
Q Consensus 80 p~n~P~~~~~~~~~~ALaaGN~vv~kps~~~~~~~~~l~~~~~~aglp~g~v~~~~~~---~~~~~~~l~~~~~~~~v~~ 156 (414)
|||||......+..+||++||+||+||++.+|++++.++++..+||+|+|++|+++++ ..+.++.|+.+|.++.|.|
T Consensus 168 PWNFP~AMItRK~gAALAaGCTvVvkPs~~TPlsaLala~lA~~AGiP~Gv~NVit~~~~~a~eig~~lctsp~VrkisF 247 (503)
T KOG2451|consen 168 PWNFPAAMITRKAGAALAAGCTVVVKPSEDTPLSALALAKLAEEAGIPAGVLNVITADASNAAEIGKELCTSPDVRKISF 247 (503)
T ss_pred CcCChHHHHHhHHHHHHhcCceEEEccCCCCchHHHHHHHHHHHcCCCCcceEEEecCCCChHHHHHHhhcCCceeeEEe
Confidence 9999999999999999999999999999999999999999999999999999999863 4578999999999999999
Q ss_pred eCCHHHHHHHHHHHhhCCCCceeeeCCCCCceeecCCCCHHHHHHHHHHHHhcccCCccccCcEEEEeCccHHHHHHHHH
Q 015031 157 TGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLV 236 (414)
Q Consensus 157 tGs~~~~~~i~~~~~~~~~~~~~~e~gG~~~~iV~~dadl~~a~~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f~~~l~ 236 (414)
|||+.+|+.++.+++ ...|++.+|+||+.|.||++|||+|.|++.....+|-++||.|.+.+|+|||+++||+|++.|.
T Consensus 248 TGST~VGKiL~~qsa-stvKkvslELGGNAPfIVFddadld~Av~g~mA~KFr~~GQtCVcaNR~yVh~~iyD~Fv~~l~ 326 (503)
T KOG2451|consen 248 TGSTNVGKILMAQSA-STVKKVSLELGGNAPFIVFDDADLDQAVEGAMACKFRNSGQTCVCANRVYVHDSIYDKFVSKLA 326 (503)
T ss_pred eccchHHHHHHHhhh-hhhhheehhhcCCCceEEecCcCHHHHHHHHHHhhhccCCceeEecceeEEehhhHHHHHHHHH
Confidence 999999999999988 8899999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhccccCCCCCCCCCccccCCHHHHHHHHHHHHHhhhcCCeEeeCCcccC-CCCceeeeEEEEeCCCCCccccccccc
Q 015031 237 EKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIG-KKGYYIEPTIFTNVTEDMLIAKNEIFG 315 (414)
Q Consensus 237 ~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~-~~g~~~~Ptvl~~~~~~~~~~~~E~fg 315 (414)
++++++++||.+|+++..||+|+..+.+++++.++||+.+|+++++||+... .+.+|++|||+.+++.+|-+..||+||
T Consensus 327 e~vkkl~vGdG~~~~tt~GpLIne~av~Kve~~v~DAvsKga~ii~GGk~~~~lg~~fyePTvl~~V~~~m~~s~eEtFG 406 (503)
T KOG2451|consen 327 EAVKKLKVGDGLDPGTTQGPLINEKAVEKVEKHVEDAVSKGAKIILGGKERSELGPTFYEPTVLSNVTQNMLVSSEETFG 406 (503)
T ss_pred HHHHheeccCCCCCCCccCCccCHHHHHHHHHHHHHHHhcCCeEEeCCeEccccCCccccceEeecCCccceeecccccc
Confidence 9999999999999999999999999999999999999999999999999544 456999999999999999999999999
Q ss_pred ceEEEeeeCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHHhccceeEEEECCcCCCCCCCCccCCCCCCCCCcchHHHH
Q 015031 316 PVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSIRAGIIWINCYFAFDSDCPYGGYKMSGFGRDCGLESL 395 (414)
Q Consensus 316 Pvl~v~~~~~~~eai~~~n~~~~gl~~sv~s~d~~~~~~~~~~l~~g~v~vN~~~~~~~~~pfgG~~~sG~g~~~g~~~~ 395 (414)
|+.+|++|+|.||+|+++|+++.||++|+||+|..+..+++++|++|+|-+|.........||||+|+||+|++++.+|+
T Consensus 407 Pla~v~kFdteeEvi~~ANdt~vGLAgYvfs~~~s~~~rVae~LEvGmVGvNeglis~~~~pFGGVKeSG~GREgskyGi 486 (503)
T KOG2451|consen 407 PLASVFKFDTEEEVIEWANDTRVGLAGYVFSNNLSRLFRVAEALEVGMVGVNEGLISDAEAPFGGVKESGFGREGSKYGI 486 (503)
T ss_pred ccceeeeeCCHHHHHHHhccCccceeeEEeccCHHHHHHHHHHHhcceeecccceecccccCcCCccccccCccccccch
Confidence 99999999999999999999999999999999999999999999999999999888889999999999999999999999
Q ss_pred HhhhcccEEEEe
Q 015031 396 HNYLQVKSVVTP 407 (414)
Q Consensus 396 ~~~~~~k~i~~~ 407 (414)
++|+..|.+.+.
T Consensus 487 dey~~ik~icig 498 (503)
T KOG2451|consen 487 DEYLVIKYICIG 498 (503)
T ss_pred hhhhhhheeeec
Confidence 999999988663
|
|
| >cd07140 ALDH_F1L_FTFDH 10-formyltetrahydrofolate dehydrogenase, ALDH family 1L | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-89 Score=696.45 Aligned_cols=407 Identities=46% Similarity=0.834 Sum_probs=382.3
Q ss_pred CHHHHHHHHHhHHHHHHHHHHHcCCChHHHhhccHHHHHHHHHHHHHhhhhhcCceeccc----cCccccccccCCcEEE
Q 015031 1 MLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMS----RALQGYTLREPIGVVG 76 (414)
Q Consensus 1 L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~----~~~~~~~~~~P~Gvv~ 76 (414)
|+++++.|++|+++|++++++|+|||..++...|+..+++.+++++.++++..+...+.. .+...+.+++|+|||+
T Consensus 73 L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~a~~~~~~~g~~~~~~~~~~~~~~~~~~r~P~GVv~ 152 (486)
T cd07140 73 MYRLADLMEEHQEELATIESLDSGAVYTLALKTHVGMSIQTFRYFAGWCDKIQGKTIPINQARPNRNLTLTKREPIGVCG 152 (486)
T ss_pred HHHHHHHHHHhHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHHHHHHhcCccccccccCCCCceEEEEeeccceEE
Confidence 578999999999999999999999999976557999999999999998877655433321 1223578899999999
Q ss_pred EEcCCCcChHhhHHHHHHHHhcCCeEEEecCCCChhHHHHHHHHHHHcCCCCCeEEEEcCCchhHHHHHHhCCCcCeEEE
Q 015031 77 HIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSF 156 (414)
Q Consensus 77 ~i~p~n~P~~~~~~~~~~ALaaGN~vv~kps~~~~~~~~~l~~~~~~aglp~g~v~~~~~~~~~~~~~l~~~~~~~~v~~ 156 (414)
+|+|||||+...++++++||++||+||+|||+.+|.++..+.+++.++|+|+|++|++++++.+.++.|..||+++.|.|
T Consensus 153 ~I~PwN~P~~~~~~~i~~ALaaGN~VVlKPs~~tp~~~~~l~~~~~~aglP~gv~~~v~g~~~~~~~~L~~~~~v~~v~f 232 (486)
T cd07140 153 IVIPWNYPLMMLAWKMAACLAAGNTVVLKPAQVTPLTALKFAELTVKAGFPKGVINILPGSGSLVGQRLSDHPDVRKLGF 232 (486)
T ss_pred EEcCCchHHHHHHHHHHHHHHhCCEEEEECCccCcHHHHHHHHHHHHcCcCCCcEEEEecCchHHHHHHhcCCCCCEEEE
Confidence 99999999999999999999999999999999999999999999999999999999999977788999999999999999
Q ss_pred eCCHHHHHHHHHHHhhCCCCceeeeCCCCCceeecCCCCHHHHHHHHHHHHhcccCCccccCcEEEEeCccHHHHHHHHH
Q 015031 157 TGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLV 236 (414)
Q Consensus 157 tGs~~~~~~i~~~~~~~~~~~~~~e~gG~~~~iV~~dadl~~a~~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f~~~l~ 236 (414)
|||+.+|+.|.+.++.++++|+++|+|||||+||++|||++.|++.+++++|.|+||.|+++++||||+++||+|+++|+
T Consensus 233 tGs~~~g~~i~~~aa~~~l~~v~lElGGk~~~iV~~dadl~~a~~~i~~~~~~~~GQ~C~a~~rl~V~~~i~~~f~~~l~ 312 (486)
T cd07140 233 TGSTPIGKHIMKSCAVSNLKKVSLELGGKSPLIIFADCDMDKAVRMGMSSVFFNKGENCIAAGRLFVEESIHDEFVRRVV 312 (486)
T ss_pred ECcHHHHHHHHHHHHhcCCCeEEEEcCCCCceEECCCCCHHHHHHHHHHHHHhccCCCCCCCcEEEEcHHHHHHHHHHHH
Confidence 99999999999998733789999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhccccCCCCCCCCCccccCCHHHHHHHHHHHHHhhhcCCeEeeCCcccCCCCceeeeEEEEeCCCCCcccccccccc
Q 015031 237 EKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIGKKGYYIEPTIFTNVTEDMLIAKNEIFGP 316 (414)
Q Consensus 237 ~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgP 316 (414)
++++++++|+|.++++++||++++.++++++++|++++++|+++++||...+.+|+|++|||+.+++++|++++||+|||
T Consensus 313 ~~~~~l~~g~p~~~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~vl~gg~~~~~~g~~~~Ptvl~~~~~~~~i~~eE~FGP 392 (486)
T cd07140 313 EEVKKMKIGDPLDRSTDHGPQNHKAHLDKLVEYCERGVKEGATLVYGGKQVDRPGFFFEPTVFTDVEDHMFIAKEESFGP 392 (486)
T ss_pred HHHHhCCccCCCCCCCcCCCCcCHHHHHHHHHHHHHHHHCCCEEEeCCCCCCCCCeeECCEEEeCCCCCChhhhCCCCCC
Confidence 99999999999999999999999999999999999999999999999976545789999999999999999999999999
Q ss_pred eEEEeeeC--CHHHHHHHHhcCCCCceEEEecCCHHHHHHHHhccceeEEEECCcCCCCCCCCccCCCCCCCCCcchHHH
Q 015031 317 VMALMKFK--TVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSIRAGIIWINCYFAFDSDCPYGGYKMSGFGRDCGLES 394 (414)
Q Consensus 317 vl~v~~~~--~~~eai~~~n~~~~gl~~sv~s~d~~~~~~~~~~l~~g~v~vN~~~~~~~~~pfgG~~~sG~g~~~g~~~ 394 (414)
|++|++|+ |++|||+++|+++|||++||||+|.+.++++++++++|.|+||++....+.+||||+|.||+|+++|.+|
T Consensus 393 vl~v~~~~~~~~~eai~~aN~~~~gL~a~vft~d~~~a~~~~~~l~~G~v~iN~~~~~~~~~PfGG~k~SG~G~~~G~~~ 472 (486)
T cd07140 393 IMIISKFDDGDVDGVLQRANDTEYGLASGVFTKDINKALYVSDKLEAGTVFVNTYNKTDVAAPFGGFKQSGFGKDLGEEA 472 (486)
T ss_pred eEEEEEcCCCCHHHHHHHHhCCCcCceEEEECCCHHHHHHHHHhCCcceEEECCCCCCCCCCCcCCcccCcCCCcchHHH
Confidence 99999998 6999999999999999999999999999999999999999999987767789999999999999999999
Q ss_pred HHhhhcccEEEEe
Q 015031 395 LHNYLQVKSVVTP 407 (414)
Q Consensus 395 ~~~~~~~k~i~~~ 407 (414)
+++||++|+++++
T Consensus 473 l~~ft~~k~v~~~ 485 (486)
T cd07140 473 LNEYLKTKTVTIE 485 (486)
T ss_pred HHHhhcEEEEEEe
Confidence 9999999999864
|
10-formyltetrahydrofolate dehydrogenase (FTHFDH, EC=1.5.1.6), also known as aldehyde dehydrogenase family 1 member L1 (ALDH1L1) in humans, is a multi-domain homotetramer with an N-terminal formyl transferase domain and a C-terminal ALDH domain. FTHFDH catalyzes an NADP+-dependent dehydrogenase reaction resulting in the conversion of 10-formyltetrahydrofolate to tetrahydrofolate and CO2. The ALDH domain is also capable of the oxidation of short chain aldehydes to their corresponding acids. |
| >PLN02174 aldehyde dehydrogenase family 3 member H1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-89 Score=690.18 Aligned_cols=400 Identities=25% Similarity=0.389 Sum_probs=369.9
Q ss_pred CHHHHHHHHHhHHHHHHHHHHHcCCChHHHhhccHHHHHHHHHHHHHhhhhhcCc----eeccccCccccccccCCcEEE
Q 015031 1 MLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGE----VLKMSRALQGYTLREPIGVVG 76 (414)
Q Consensus 1 L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~~~~~~~~----~~~~~~~~~~~~~~~P~Gvv~ 76 (414)
|+++++.|++|+++|+++++.|+|||..++...|+..+++.++++++.+++..+. ......+...++.++|+|||+
T Consensus 38 L~~~a~~l~~~~~ela~~l~~e~GKp~~~a~~~Ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~ 117 (484)
T PLN02174 38 LKKLMIICDNHEPEIVAALRDDLGKPELESSVYEVSLLRNSIKLALKQLKNWMAPEKAKTSLTTFPASAEIVSEPLGVVL 117 (484)
T ss_pred HHHHHHHHHHhHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccccccccCCcceEEEEecceEEE
Confidence 6799999999999999999999999998765569999999999999987765442 111112335678999999999
Q ss_pred EEcCCCcChHhhHHHHHHHHhcCCeEEEecCCCChhHHHHHHHHHHHcCCCCCeEEEEcCCchhHHHHHHhCCCcCeEEE
Q 015031 77 HIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSF 156 (414)
Q Consensus 77 ~i~p~n~P~~~~~~~~~~ALaaGN~vv~kps~~~~~~~~~l~~~~~~aglp~g~v~~~~~~~~~~~~~l~~~~~~~~v~~ 156 (414)
+|+|||||+...++++++||++||+||+|||+.+|+++..+.+++.+ ++|+|++|+++|.+ +.+..|+. +.+|.|.|
T Consensus 118 ~I~PwN~P~~~~~~~~~~ALaaGN~VVlKPse~tp~~~~~l~~l~~~-~lp~gvv~vv~G~~-~~~~~l~~-~~vd~V~F 194 (484)
T PLN02174 118 VISAWNYPFLLSIDPVIGAISAGNAVVLKPSELAPASSALLAKLLEQ-YLDSSAVRVVEGAV-TETTALLE-QKWDKIFY 194 (484)
T ss_pred EECCCccHHHHHHHHHHHHHHcCCEEEEECCCCCHHHHHHHHHHHHH-hCCCCEEEEEECCh-HHHHHHhc-ccCCEEEE
Confidence 99999999999999999999999999999999999999999999999 69999999999844 45677775 88999999
Q ss_pred eCCHHHHHHHHHHHhhCCCCceeeeCCCCCceeecCCCCHHHHHHHHHHHHh-cccCCccccCcEEEEeCccHHHHHHHH
Q 015031 157 TGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGIL-FNKGEICVASSRVYVQEGIYDEFEKKL 235 (414)
Q Consensus 157 tGs~~~~~~i~~~~~~~~~~~~~~e~gG~~~~iV~~dadl~~a~~~i~~~~~-~~~Gq~C~a~~~v~V~~~~~~~f~~~l 235 (414)
|||+.+|+.|.+.++ ++++|+++|+|||||+||++|||++.|++.+++++| .|+||.|++++|||||++++|+|+++|
T Consensus 195 TGS~~~G~~I~~~aa-~~l~~v~LELGGk~p~iV~~dADl~~Aa~~i~~g~f~~n~GQ~C~a~~rv~V~~~i~d~f~~~l 273 (484)
T PLN02174 195 TGSSKIGRVIMAAAA-KHLTPVVLELGGKSPVVVDSDTDLKVTVRRIIAGKWGCNNGQACISPDYILTTKEYAPKVIDAM 273 (484)
T ss_pred ECChHHHHHHHHHHH-hcCCcEEEecCCCCeEEEcCCCCHHHHHHHHHHHHhhCCCCCCCCcCcEEEEeHHHHHHHHHHH
Confidence 999999999999988 889999999999999999999999999999999999 699999999999999999999999999
Q ss_pred HHHHhccccCCCCCCCCCccccCCHHHHHHHHHHHHHhhhcCCeEeeCCcccCCCCceeeeEEEEeCCCCCccccccccc
Q 015031 236 VEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIGKKGYYIEPTIFTNVTEDMLIAKNEIFG 315 (414)
Q Consensus 236 ~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fg 315 (414)
+++++++++|+|.+ ++++||++++.++++++++|+++ .+|+++++||... .+|+|++|||+.+++++|++++||+||
T Consensus 274 ~~~~~~~~~G~p~~-~~~~Gpli~~~~~~~v~~~i~~a-~~ga~~~~GG~~~-~~g~~~~PTvl~~v~~~~~i~~eEiFG 350 (484)
T PLN02174 274 KKELETFYGKNPME-SKDMSRIVNSTHFDRLSKLLDEK-EVSDKIVYGGEKD-RENLKIAPTILLDVPLDSLIMSEEIFG 350 (484)
T ss_pred HHHHHhhcCCCCcc-cCCcCCCCCHHHHHHHHHHHHHH-HcCCEEEECCCcC-CCCCEEEEEEEecCCCCChhhcCCcCC
Confidence 99999999999987 78999999999999999999997 7789999999763 368999999999999999999999999
Q ss_pred ceEEEeeeCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHHhccceeEEEECCcCCCC--CCCCccCCCCCCCCCcchHH
Q 015031 316 PVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSIRAGIIWINCYFAFD--SDCPYGGYKMSGFGRDCGLE 393 (414)
Q Consensus 316 Pvl~v~~~~~~~eai~~~n~~~~gl~~sv~s~d~~~~~~~~~~l~~g~v~vN~~~~~~--~~~pfgG~~~sG~g~~~g~~ 393 (414)
||++|++|+|.||||+++|+++|||++||||+|.+.++++++++++|.|+||++.... +.+||||+|.||+|+++|.+
T Consensus 351 PVl~v~~~~~~~eai~~aN~~~~gLaa~vft~d~~~a~~~~~~l~aG~v~IN~~~~~~~~~~~PfGG~k~SG~Gr~~G~~ 430 (484)
T PLN02174 351 PLLPILTLNNLEESFDVIRSRPKPLAAYLFTHNKKLKERFAATVSAGGIVVNDIAVHLALHTLPFGGVGESGMGAYHGKF 430 (484)
T ss_pred CeEEEecCCCHHHHHHHHhCCCCCeEEEEEcCCHHHHHHHHHcCCcceEEECCCcCCCCCCCCCCCCcCccccCccchHH
Confidence 9999999999999999999999999999999999999999999999999999986533 67899999999999999999
Q ss_pred HHHhhhcccEEEEe
Q 015031 394 SLHNYLQVKSVVTP 407 (414)
Q Consensus 394 ~~~~~~~~k~i~~~ 407 (414)
|+++||+.|+|+++
T Consensus 431 gl~~ft~~K~v~~~ 444 (484)
T PLN02174 431 SFDAFSHKKAVLYR 444 (484)
T ss_pred HHHHhcceEEEEEC
Confidence 99999999999875
|
|
| >TIGR03374 ABALDH 1-pyrroline dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-89 Score=693.92 Aligned_cols=404 Identities=36% Similarity=0.648 Sum_probs=379.0
Q ss_pred CHHHHHHHHHhHHHHHHHHHHHcCCChHHHhhccHHHHHHHHHHHHHhhhhhcCceecc-ccCccccccccCCcEEEEEc
Q 015031 1 MLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKM-SRALQGYTLREPIGVVGHII 79 (414)
Q Consensus 1 L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~~~~~~~~~~~~-~~~~~~~~~~~P~Gvv~~i~ 79 (414)
|+++++.|++++++|++++++|+|||..++...|+..+++.+++++..++...+...+. ..+...++.++|+|||++|+
T Consensus 66 L~~~a~~l~~~~~ela~~~~~e~Gk~~~~~~~~ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVV~~I~ 145 (472)
T TIGR03374 66 LLKLADVIEENAQVFAELESRNCGKPLHSVFNDEIPAIVDVFRFFAGAARCLSGLAAGEYLEGHTSMIRRDPLGVVASIA 145 (472)
T ss_pred HHHHHHHHHHhHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCcccCccCCCceEEEEEecceEEEEEC
Confidence 57899999999999999999999999987655699999999999988776554432111 12345678999999999999
Q ss_pred CCCcChHhhHHHHHHHHhcCCeEEEecCCCChhHHHHHHHHHHHcCCCCCeEEEEcCCchhHHHHHHhCCCcCeEEEeCC
Q 015031 80 PWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGS 159 (414)
Q Consensus 80 p~n~P~~~~~~~~~~ALaaGN~vv~kps~~~~~~~~~l~~~~~~aglp~g~v~~~~~~~~~~~~~l~~~~~~~~v~~tGs 159 (414)
|||||+...++++++||++||+||+|||+.+|.++..+.+++.++ +|+|++|++++++.+.++.|+.||++|.|.||||
T Consensus 146 PwN~P~~~~~~~~~~ALaaGN~VV~KPs~~tp~~~~~l~~l~~~~-lP~gv~~~v~g~~~~~~~~L~~~~~v~~V~fTGS 224 (472)
T TIGR03374 146 PWNYPLMMAAWKLAPALAAGNCVVLKPSEITPLTALKLAELAKDI-FPAGVVNILFGRGKTVGDPLTGHEKVRMVSLTGS 224 (472)
T ss_pred CCCchHHHHHHHHHHHHhcCCEEEecCCCCCCHHHHHHHHHHHHh-CCcCeEEEEecCchhHHHHHhcCCCcCEEEEECC
Confidence 999999999999999999999999999999999999999999886 9999999999977788999999999999999999
Q ss_pred HHHHHHHHHHHhhCCCCceeeeCCCCCceeecCCCCHHHHHHHHHHHHhcccCCccccCcEEEEeCccHHHHHHHHHHHH
Q 015031 160 TDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKA 239 (414)
Q Consensus 160 ~~~~~~i~~~~~~~~~~~~~~e~gG~~~~iV~~dadl~~a~~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f~~~l~~~~ 239 (414)
+++|+.|.+.++ ++++|+++|+|||||+||++|||++.|++.+++++|+|+||.|++++|||||++++|+|+++|++++
T Consensus 225 ~~~G~~i~~~aa-~~~~~~~lElGGk~p~iV~~dadl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~~~f~~~l~~~~ 303 (472)
T TIGR03374 225 IATGEHILSHTA-PSIKRTHMELGGKAPVIVFDDADIDAVVEGVRTFGFYNAGQDCTAACRIYAQRGIYDTLVEKLGAAV 303 (472)
T ss_pred HHHHHHHHHHHh-hcccceEEecCCCCeeEECCCCCHHHHHHHHHHHHHhhcCCccccCCEEEEcHHHHHHHHHHHHHHH
Confidence 999999999887 8899999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hccccCCCCCCCCCccccCCHHHHHHHHHHHHHhhhcC-CeEeeCCcccCCCCceeeeEEEEeCCCCCcccccccccceE
Q 015031 240 KAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREG-ATLLTGGKPIGKKGYYIEPTIFTNVTEDMLIAKNEIFGPVM 318 (414)
Q Consensus 240 ~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~g-a~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl 318 (414)
+++++|+|.++++++||+++..++++++++|++++++| +++++||....+.|+|+.|||+.+++++|++++||+||||+
T Consensus 304 ~~l~~G~p~~~~~~~Gpli~~~~~~~v~~~i~~a~~~G~a~v~~gg~~~~~~g~~~~Ptvl~~v~~~~~i~~eE~FGPvl 383 (472)
T TIGR03374 304 ATLKSGAPDDESTELGPLSSLAHLERVMKAVEEAKALGHIKVITGGEKRKGNGYYFAPTLLAGAKQDDAIVQKEVFGPVV 383 (472)
T ss_pred hcCCCCCCCCCCCcCCCCCCHHHHHHHHHHHHHHHHcCCeEEEeCCccCCCCCeEEeeEEEeCCCCCChhhhCCccCceE
Confidence 99999999999999999999999999999999999999 79999997654468999999999999999999999999999
Q ss_pred EEeeeCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHHhccceeEEEECCcCCCCCCCCccCCCCCCCCCcchHHHHHhh
Q 015031 319 ALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSIRAGIIWINCYFAFDSDCPYGGYKMSGFGRDCGLESLHNY 398 (414)
Q Consensus 319 ~v~~~~~~~eai~~~n~~~~gl~~sv~s~d~~~~~~~~~~l~~g~v~vN~~~~~~~~~pfgG~~~sG~g~~~g~~~~~~~ 398 (414)
+|++|+|.||||+++|+++|||++||||+|.+.+.++++++++|.|+||+.....+.+||||+|.||+|+++|++|+++|
T Consensus 384 ~v~~~~~~~eai~~an~~~~gL~a~vft~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~PfGG~k~SG~G~~~g~~~l~~~ 463 (472)
T TIGR03374 384 SITSFDDEEQVVNWANDSQYGLASSVWTKDVGRAHRLSARLQYGCTWVNTHFMLVSEMPHGGQKLSGYGKDMSLYGLEDY 463 (472)
T ss_pred EEEEECCHHHHHHHHhCCCCCceEEEECCCHHHHHHHHHhCCcceEEECCCCCCCCCCCCCCCccCccCccchHHHHHHh
Confidence 99999999999999999999999999999999999999999999999999877777899999999999999999999999
Q ss_pred hcccEEEE
Q 015031 399 LQVKSVVT 406 (414)
Q Consensus 399 ~~~k~i~~ 406 (414)
|++|+++.
T Consensus 464 t~~k~i~~ 471 (472)
T TIGR03374 464 TVVRHIMV 471 (472)
T ss_pred hceEEEEE
Confidence 99999875
|
Members of this protein family are 1-pyrroline dehydrogenase (1.5.1.35), also called gamma-aminobutyraldehyde dehydrogenase. This enzyme can follow putrescine transaminase (EC 2.6.1.82) for a two-step conversion of putrescine to gamma-aminobutyric acid (GABA). The member from Escherichia coli is characterized as a homotetramer that binds one NADH per momomer. This enzyme belongs to the medium-chain aldehyde dehydrogenases, and is quite similar in sequence to the betaine aldehyde dehydrogenase (EC 1.2.1.8) family. |
| >cd07113 ALDH_PADH_NahF Escherichia coli NAD+-dependent phenylacetaldehyde dehydrogenase PadA-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.6e-89 Score=694.93 Aligned_cols=405 Identities=40% Similarity=0.713 Sum_probs=380.2
Q ss_pred CHHHHHHHHHhHHHHHHHHHHHcCCChHHHhhccHHHHHHHHHHHHHhhhhhcCceeccc------cCccccccccCCcE
Q 015031 1 MLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMS------RALQGYTLREPIGV 74 (414)
Q Consensus 1 L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~------~~~~~~~~~~P~Gv 74 (414)
|+++++.|++++++|++++++|+|||..++...|+..+++.+++++.++.+..+...+.. .+...+.+++|+||
T Consensus 66 L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GV 145 (477)
T cd07113 66 LLRLADLIEQHGEELAQLETLCSGKSIHLSRAFEVGQSANFLRYFAGWATKINGETLAPSIPSMQGERYTAFTRREPVGV 145 (477)
T ss_pred HHHHHHHHHHCHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCcccccccccccCCCceEEEEEeecce
Confidence 578999999999999999999999999976546999999999999988876554432111 12345789999999
Q ss_pred EEEEcCCCcChHhhHHHHHHHHhcCCeEEEecCCCChhHHHHHHHHHHHcCCCCCeEEEEcCCchhHHHHHHhCCCcCeE
Q 015031 75 VGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKV 154 (414)
Q Consensus 75 v~~i~p~n~P~~~~~~~~~~ALaaGN~vv~kps~~~~~~~~~l~~~~~~aglp~g~v~~~~~~~~~~~~~l~~~~~~~~v 154 (414)
|++|+|||||+...++++++||++||+||+|||+.+|.++..+.+++.++|+|+|++|++++++. .+..|+.||++|.|
T Consensus 146 v~~I~p~N~P~~~~~~~i~~ALaaGN~VvlKPs~~tp~~~~~l~~~~~~aglP~gvv~~v~g~~~-~~~~L~~~~~v~~V 224 (477)
T cd07113 146 VAGIVPWNFSVMIAVWKIGAALATGCTIVIKPSEFTPLTLLRVAELAKEAGIPDGVLNVVNGKGA-VGAQLISHPDVAKV 224 (477)
T ss_pred EEEEcCCChHHHHHHHHHHHHHHcCCEEEEECCCCCcHHHHHHHHHHHHcCcCCCcEEEEecCch-HHHHHhcCCCCCEE
Confidence 99999999999999999999999999999999999999999999999999999999999999765 88999999999999
Q ss_pred EEeCCHHHHHHHHHHHhhCCCCceeeeCCCCCceeecCCCCHHHHHHHHHHHHhcccCCccccCcEEEEeCccHHHHHHH
Q 015031 155 SFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKK 234 (414)
Q Consensus 155 ~~tGs~~~~~~i~~~~~~~~~~~~~~e~gG~~~~iV~~dadl~~a~~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f~~~ 234 (414)
.||||+.+|+.|.+.++ ++++|+++|+||+||+||++|||++.|++.+++++|.|+||.|+++++||||++++|+|+++
T Consensus 225 ~fTGS~~~G~~i~~~aa-~~~~~~~lElGGkn~~iV~~dAdl~~aa~~i~~~~f~~~GQ~C~a~~rv~V~~~i~d~f~~~ 303 (477)
T cd07113 225 SFTGSVATGKKIGRQAA-SDLTRVTLELGGKNAAAFLKDADIDWVVEGLLTAGFLHQGQVCAAPERFYVHRSKFDELVTK 303 (477)
T ss_pred EEECcHHHHHHHHHHHH-hhcCceEeecCCCCeeEECCCCCHHHHHHHHHHHHHhhCCCCCcCCcEEEECHHHHHHHHHH
Confidence 99999999999999987 78999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhccccCCCCCCCCCccccCCHHHHHHHHHHHHHhhhcCCeEeeCCcccCCCCceeeeEEEEeCCCCCcccccccc
Q 015031 235 LVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIGKKGYYIEPTIFTNVTEDMLIAKNEIF 314 (414)
Q Consensus 235 l~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~f 314 (414)
|+++++++++|+|.|+++++||++++.+++++.+++++++++|+++++||....+.|+|++|||+.+++++|+++++|+|
T Consensus 304 l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~~~~~i~~a~~~Ga~~l~gg~~~~~~g~~~~Ptvl~~v~~~~~~~~eE~F 383 (477)
T cd07113 304 LKQALSSFQVGSPMDESVMFGPLANQPHFDKVCSYLDDARAEGDEIVRGGEALAGEGYFVQPTLVLARSADSRLMREETF 383 (477)
T ss_pred HHHHHHhCCCCCCCCCCCCCCCCcCHHHHHHHHHHHHHHHHCCCEEEeCCCCCCCCCeeEeCEEEecCCCCChHHhCCCC
Confidence 99999999999999999999999999999999999999999999999999765446999999999999999999999999
Q ss_pred cceEEEeeeCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHHhccceeEEEECCcCCCCCCCCccCCCCCCCCCcchHHH
Q 015031 315 GPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSIRAGIIWINCYFAFDSDCPYGGYKMSGFGRDCGLES 394 (414)
Q Consensus 315 gPvl~v~~~~~~~eai~~~n~~~~gl~~sv~s~d~~~~~~~~~~l~~g~v~vN~~~~~~~~~pfgG~~~sG~g~~~g~~~ 394 (414)
|||++|++|+|.||||+++|+++|||++||||+|.+.++++++++++|+|+||++....+.+||||+|.||+|+++|.++
T Consensus 384 gPvl~v~~~~~~deai~~~n~~~~gL~a~v~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~PfGG~k~SG~G~~~g~~~ 463 (477)
T cd07113 384 GPVVSFVPYEDEEELIQLINDTPFGLTASVWTNNLSKALRYIPRIEAGTVWVNMHTFLDPAVPFGGMKQSGIGREFGSAF 463 (477)
T ss_pred CCeEEEEEeCCHHHHHHHHhCCCCCceEEEECCCHHHHHHHHHhCCcceEEECCCCCCCCCCCCCCCccccCCccchHHH
Confidence 99999999999999999999999999999999999999999999999999999877667789999999999999999999
Q ss_pred HHhhhcccEEEEe
Q 015031 395 LHNYLQVKSVVTP 407 (414)
Q Consensus 395 ~~~~~~~k~i~~~ 407 (414)
+++||++|+++.+
T Consensus 464 l~~~t~~k~v~~~ 476 (477)
T cd07113 464 IDDYTELKSVMIR 476 (477)
T ss_pred HHHhhceEEEEEe
Confidence 9999999999764
|
NAD+-dependent, homodimeric, phenylacetaldehyde dehydrogenase (PADH, EC=1.2.1.39) PadA of Escherichia coli involved in the catabolism of 2-phenylethylamine, and other related sequences, are present in this CD. Also included is the Pseudomonas fluorescens ST StyD PADH involved in styrene catabolism, the Sphingomonas sp. LB126 FldD protein involved in fluorene degradation, and the Novosphingobium aromaticivorans NahF salicylaldehyde dehydrogenase involved in the NAD+-dependent conversion of salicylaldehyde to salicylate. |
| >cd07142 ALDH_F2BC Arabidosis aldehyde dehydrogenase family 2 B4, B7, C4-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.8e-89 Score=694.57 Aligned_cols=405 Identities=62% Similarity=1.038 Sum_probs=382.1
Q ss_pred CHHHHHHHHHhHHHHHHHHHHHcCCChHHHhhccHHHHHHHHHHHHHhhhhhcCceeccccCccccccccCCcEEEEEcC
Q 015031 1 MLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMSRALQGYTLREPIGVVGHIIP 80 (414)
Q Consensus 1 L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p 80 (414)
|+++++.|++|+++|++++++|+|||..++...|+..+++.+++++.++++..+...+...+...+..++|+|||++|+|
T Consensus 71 L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~a~~~~~~~g~~~~~~~~~~~~~~~~P~GVv~~I~p 150 (476)
T cd07142 71 LLRFADLLEKHADELAALETWDNGKPYEQARYAEVPLAARLFRYYAGWADKIHGMTLPADGPHHVYTLHEPIGVVGQIIP 150 (476)
T ss_pred HHHHHHHHHHhHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCcccccCCCceEEEEEeceeeEEEECC
Confidence 57899999999999999999999999997655799999999999999887765554432223345788999999999999
Q ss_pred CCcChHhhHHHHHHHHhcCCeEEEecCCCChhHHHHHHHHHHHcCCCCCeEEEEcCCchhHHHHHHhCCCcCeEEEeCCH
Q 015031 81 WNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGST 160 (414)
Q Consensus 81 ~n~P~~~~~~~~~~ALaaGN~vv~kps~~~~~~~~~l~~~~~~aglp~g~v~~~~~~~~~~~~~l~~~~~~~~v~~tGs~ 160 (414)
||||+...++++++||++||+||+|||+.+|.++..+.+++.++|+|+|++|++++++.+.++.|..||++|.|.||||+
T Consensus 151 wN~P~~~~~~~i~~ALaaGN~VV~KPs~~tp~~~~~l~~~~~~aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~v~fTGs~ 230 (476)
T cd07142 151 WNFPLLMFAWKVGPALACGNTIVLKPAEQTPLSALLAAKLAAEAGLPDGVLNIVTGFGPTAGAAIASHMDVDKVAFTGST 230 (476)
T ss_pred CccHHHHHHHHHHHHHHcCCEEEEECCCcccHHHHHHHHHHHHcCcCcccEEEEeCCchhHHHHHhcCCCCCEEEEECcH
Confidence 99999999999999999999999999999999999999999999999999999999777789999999999999999999
Q ss_pred HHHHHHHHHHhhCCCCceeeeCCCCCceeecCCCCHHHHHHHHHHHHhcccCCccccCcEEEEeCccHHHHHHHHHHHHh
Q 015031 161 DVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAK 240 (414)
Q Consensus 161 ~~~~~i~~~~~~~~~~~~~~e~gG~~~~iV~~dadl~~a~~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f~~~l~~~~~ 240 (414)
.+|+.|.+.++.++++|+++|+|||||+||++|||++.|++.+++++|.|+||.|+++++||||++++|+|+++|+++++
T Consensus 231 ~~G~~v~~~aa~~~~~~v~lElgGk~p~iV~~dADl~~Aa~~i~~~~f~~aGQ~C~a~~rv~V~~~i~d~f~~~l~~~~~ 310 (476)
T cd07142 231 EVGKIIMQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAVELAHFALFFNQGQCCCAGSRTFVHESIYDEFVEKAKARAL 310 (476)
T ss_pred HHHHHHHHHHHHcCCCeEEEECCCCCeeEECCCCCHHHHHHHHHHHHhcCCCCCCCCCeeEEEeHHHHHHHHHHHHHHHH
Confidence 99999999987338899999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccCCCCCCCCCccccCCHHHHHHHHHHHHHhhhcCCeEeeCCcccCCCCceeeeEEEEeCCCCCcccccccccceEEE
Q 015031 241 AWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIGKKGYYIEPTIFTNVTEDMLIAKNEIFGPVMAL 320 (414)
Q Consensus 241 ~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v 320 (414)
++++|+|.++++++||+++..+++++++++++++++|+++++||.....+|+|+.|||+.+++++|++++||+||||++|
T Consensus 311 ~~~~G~p~~~~~~~Gpli~~~~~~~v~~~v~~a~~~Ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~i~~eE~FgPvl~v 390 (476)
T cd07142 311 KRVVGDPFRKGVEQGPQVDKEQFEKILSYIEHGKEEGATLITGGDRIGSKGYYIQPTIFSDVKDDMKIARDEIFGPVQSI 390 (476)
T ss_pred hcCCCCCCCCCCcCCcCcCHHHHHHHHHHHHHHHhCCCEEEecCCcCCCCCeeEccEEeecCCCCChhhhCCccCceEEE
Confidence 99999999999999999999999999999999999999999999875557899999999999999999999999999999
Q ss_pred eeeCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHHhccceeEEEECCcCCCCCCCCccCCCCCCCCCcchHHHHHhhhc
Q 015031 321 MKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSIRAGIIWINCYFAFDSDCPYGGYKMSGFGRDCGLESLHNYLQ 400 (414)
Q Consensus 321 ~~~~~~~eai~~~n~~~~gl~~sv~s~d~~~~~~~~~~l~~g~v~vN~~~~~~~~~pfgG~~~sG~g~~~g~~~~~~~~~ 400 (414)
++|+|++|||+++|++++||++||||+|.+.++++++++++|+|+||++....+.+||||+|.||+|+++|.+++++||+
T Consensus 391 ~~~~~~~eai~~~n~~~~gL~a~vft~d~~~a~~~~~~l~~G~v~iN~~~~~~~~~PfGG~k~SG~G~~~g~~~~~~ft~ 470 (476)
T cd07142 391 LKFKTVDEVIKRANNSKYGLAAGVFSKNIDTANTLSRALKAGTVWVNCYDVFDASIPFGGYKMSGIGREKGIYALNNYLQ 470 (476)
T ss_pred EeeCCHHHHHHHHhCCCCCceEEEECCCHHHHHHHHHhCCcceEEECCCCCCCCCCCCCCCccCcCCccchHHHHHHhhh
Confidence 99999999999999999999999999999999999999999999999987777889999999999999999999999999
Q ss_pred ccEEE
Q 015031 401 VKSVV 405 (414)
Q Consensus 401 ~k~i~ 405 (414)
+|+++
T Consensus 471 ~k~v~ 475 (476)
T cd07142 471 VKAVV 475 (476)
T ss_pred eeEEe
Confidence 99985
|
Included in this CD is the Arabidosis aldehyde dehydrogenase family 2 members B4 and B7 (EC=1.2.1.3), which are mitochondrial homotetramers that oxidize acetaldehyde and glycolaldehyde, but not L-lactaldehyde. Also in this group, is the Arabidosis cytosolic, homotetramer ALDH2C4 (EC=1.2.1.3), an enzyme involved in the oxidation of sinapalehyde and coniferaldehyde. |
| >PLN02278 succinic semialdehyde dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-88 Score=692.65 Aligned_cols=405 Identities=43% Similarity=0.698 Sum_probs=381.3
Q ss_pred CHHHHHHHHHhHHHHHHHHHHHcCCChHHHhhccHHHHHHHHHHHHHhhhhhcCceeccc-cCccccccccCCcEEEEEc
Q 015031 1 MLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMS-RALQGYTLREPIGVVGHII 79 (414)
Q Consensus 1 L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~-~~~~~~~~~~P~Gvv~~i~ 79 (414)
|+++++.|++|+++|++++++|+|||..++ ..|+..+++.+++++..+.+..+...+.. .+...+.+++|+|||++|+
T Consensus 90 L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a-~~Ev~~~i~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~P~GvV~~I~ 168 (498)
T PLN02278 90 LRRWYDLIIANKEDLAQLMTLEQGKPLKEA-IGEVAYGASFLEYFAEEAKRVYGDIIPSPFPDRRLLVLKQPVGVVGAIT 168 (498)
T ss_pred HHHHHHHHHHhHHHHHHHHHHHcCCCHHHH-HHHHHHHHHHHHHHHHHHHHhcCcccccCCCCceEEEEeecccEEEEEC
Confidence 578999999999999999999999999975 56999999999999988876655433322 2345677889999999999
Q ss_pred CCCcChHhhHHHHHHHHhcCCeEEEecCCCChhHHHHHHHHHHHcCCCCCeEEEEcCCchhHHHHHHhCCCcCeEEEeCC
Q 015031 80 PWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGS 159 (414)
Q Consensus 80 p~n~P~~~~~~~~~~ALaaGN~vv~kps~~~~~~~~~l~~~~~~aglp~g~v~~~~~~~~~~~~~l~~~~~~~~v~~tGs 159 (414)
|||||++..++++++||++||+||+|||+.+|.++..+.+++.++|+|+|++|++++++.+.++.|+.||++|.|.||||
T Consensus 169 PwN~P~~~~~~~i~~ALaaGN~VVlKps~~tp~~~~~l~~~l~eaglP~gvv~~v~g~~~~~~~~L~~~~~v~~V~fTGS 248 (498)
T PLN02278 169 PWNFPLAMITRKVGPALAAGCTVVVKPSELTPLTALAAAELALQAGIPPGVLNVVMGDAPEIGDALLASPKVRKITFTGS 248 (498)
T ss_pred CCccHHHHHHHHHHHHHHcCCEEEEECCCCChHHHHHHHHHHHHcCCCcccEEEEecCChhhHHHHhcCCCcCEEEEECc
Confidence 99999999999999999999999999999999999999999999999999999999977778899999999999999999
Q ss_pred HHHHHHHHHHHhhCCCCceeeeCCCCCceeecCCCCHHHHHHHHHHHHhcccCCccccCcEEEEeCccHHHHHHHHHHHH
Q 015031 160 TDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKA 239 (414)
Q Consensus 160 ~~~~~~i~~~~~~~~~~~~~~e~gG~~~~iV~~dadl~~a~~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f~~~l~~~~ 239 (414)
+++|+.|.+.++ ++++|+++|+|||||+||++|||++.|++.+++++|+|+||.|+++++||||++++|+|+++|++++
T Consensus 249 ~~~G~~i~~~aa-~~~~~~~lElGGk~~~iV~~dAdl~~aa~~i~~~~f~~~GQ~C~a~~rv~V~~~i~~~f~~~L~~~~ 327 (498)
T PLN02278 249 TAVGKKLMAGAA-ATVKRVSLELGGNAPFIVFDDADLDVAVKGALASKFRNSGQTCVCANRILVQEGIYDKFAEAFSKAV 327 (498)
T ss_pred HHHHHHHHHHHh-hcCCcEEEecCCCCeeEECCCCCHHHHHHHHHHHHhccCCCCCcCCcEEEEeHHHHHHHHHHHHHHH
Confidence 999999999987 7899999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hccccCCCCCCCCCccccCCHHHHHHHHHHHHHhhhcCCeEeeCCcccCCCCceeeeEEEEeCCCCCcccccccccceEE
Q 015031 240 KAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIGKKGYYIEPTIFTNVTEDMLIAKNEIFGPVMA 319 (414)
Q Consensus 240 ~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~ 319 (414)
+++++|+|.++++++||++++.+++++++++++++++|+++++||.....+|+|++|||+.+++++|+++++|+||||++
T Consensus 328 ~~l~~G~p~~~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~vl~gG~~~~~~g~~~~Ptvl~~v~~~~~~~~~E~FGPVl~ 407 (498)
T PLN02278 328 QKLVVGDGFEEGVTQGPLINEAAVQKVESHVQDAVSKGAKVLLGGKRHSLGGTFYEPTVLGDVTEDMLIFREEVFGPVAP 407 (498)
T ss_pred HhcCCCCCCCCCCcCCCccCHHHHHHHHHHHHHHHhCCCEEEeCCccCCCCCceEeeEEEecCCCCChhhhCCCcCCEEE
Confidence 99999999999999999999999999999999999999999999976544689999999999999999999999999999
Q ss_pred EeeeCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHHhccceeEEEECCcCCCCCCCCccCCCCCCCCCcchHHHHHhhh
Q 015031 320 LMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSIRAGIIWINCYFAFDSDCPYGGYKMSGFGRDCGLESLHNYL 399 (414)
Q Consensus 320 v~~~~~~~eai~~~n~~~~gl~~sv~s~d~~~~~~~~~~l~~g~v~vN~~~~~~~~~pfgG~~~sG~g~~~g~~~~~~~~ 399 (414)
|++|+|+||||+++|+++|||++||||+|.+.++++++++++|.|+||+.....+.+||||+|.||+|+++|++|+++||
T Consensus 408 v~~~~~~deai~~~N~~~~gL~a~vft~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~PfGG~k~SG~G~~~G~~~l~~ft 487 (498)
T PLN02278 408 LTRFKTEEEAIAIANDTEAGLAAYIFTRDLQRAWRVSEALEYGIVGVNEGLISTEVAPFGGVKQSGLGREGSKYGIDEYL 487 (498)
T ss_pred EEeeCCHHHHHHHHhCCCCCceEEEEcCCHHHHHHHHHhCCcCeEEECCCCCCCCCCCcCCcccCcCCccchHHHHHHhh
Confidence 99999999999999999999999999999999999999999999999997665567899999999999999999999999
Q ss_pred cccEEEEe
Q 015031 400 QVKSVVTP 407 (414)
Q Consensus 400 ~~k~i~~~ 407 (414)
+.|+++.+
T Consensus 488 ~~k~i~~~ 495 (498)
T PLN02278 488 EIKYVCLG 495 (498)
T ss_pred eeEEEEEe
Confidence 99999764
|
|
| >PRK13968 putative succinate semialdehyde dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-88 Score=686.70 Aligned_cols=404 Identities=30% Similarity=0.482 Sum_probs=377.0
Q ss_pred CHHHHHHHHHhHHHHHHHHHHHcCCChHHHhhccHHHHHHHHHHHHHhhhhhcCceeccccCccccccccCCcEEEEEcC
Q 015031 1 MLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMSRALQGYTLREPIGVVGHIIP 80 (414)
Q Consensus 1 L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p 80 (414)
|+++++.|++|+++|++++++|+|||..++ ..|+..+++.+++++...++..+.......+...+++++|+|||++|+|
T Consensus 57 L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a-~~ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GvV~~I~P 135 (462)
T PRK13968 57 LRDIGKALRARSEEMAQMITREMGKPINQA-RAEVAKSANLCDWYAEHGPAMLKAEPTLVENQQAVIEYRPLGTILAIMP 135 (462)
T ss_pred HHHHHHHHHhHHHHHHHHHHHHhCCCHHHH-HHHHHHHHHHHHHHHHHHHHhhCCccccCCCceEEEEEeccceEEEEcC
Confidence 578999999999999999999999999875 4799999999999998776553322111124456788999999999999
Q ss_pred CCcChHhhHHHHHHHHhcCCeEEEecCCCChhHHHHHHHHHHHcCCCCCeEEEEcCCchhHHHHHHhCCCcCeEEEeCCH
Q 015031 81 WNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGST 160 (414)
Q Consensus 81 ~n~P~~~~~~~~~~ALaaGN~vv~kps~~~~~~~~~l~~~~~~aglp~g~v~~~~~~~~~~~~~l~~~~~~~~v~~tGs~ 160 (414)
||||++..++++++||++||+||+|||+.+|.++..+.+++.++|+|+|++|++++++.+ ...++.||++|.|.||||+
T Consensus 136 wN~P~~~~~~~~~~ALaaGN~vv~KPs~~tp~~~~~l~~~~~~aGlP~gv~~~v~g~~~~-~~~l~~~~~v~~V~fTGs~ 214 (462)
T PRK13968 136 WNFPLWQVMRGAVPILLAGNGYLLKHAPNVMGCAQLIAQVFKDAGIPQGVYGWLNADNDG-VSQMINDSRIAAVTVTGSV 214 (462)
T ss_pred CchHHHHHHHHHHHHHHcCCEEEEECCCcChHHHHHHHHHHHHcCcCcCcEEEEecCchh-hHHHhcCCCCCEEEEECCH
Confidence 999999999999999999999999999999999999999999999999999999986544 4558899999999999999
Q ss_pred HHHHHHHHHHhhCCCCceeeeCCCCCceeecCCCCHHHHHHHHHHHHhcccCCccccCcEEEEeCccHHHHHHHHHHHHh
Q 015031 161 DVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAK 240 (414)
Q Consensus 161 ~~~~~i~~~~~~~~~~~~~~e~gG~~~~iV~~dadl~~a~~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f~~~l~~~~~ 240 (414)
++|+.|.+.++ ++++|+++|+|||||+||++|||++.|++.+++++|+|+||.|++++++|||++++|+|+++|+++++
T Consensus 215 ~~G~~i~~~aa-~~l~~~~lElGGk~p~iV~~dAdl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~~~f~~~l~~~~~ 293 (462)
T PRK13968 215 RAGAAIGAQAG-AALKKCVLELGGSDPFIVLNDADLELAVKAAVAGRYQNTGQVCAAAKRFIIEEGIASAFTERFVAAAA 293 (462)
T ss_pred HHHHHHHHHHh-hcCCcEEEecCCCCceEECCCCCHHHHHHHHHHHHHhccCCCCcCCcEEEECHhHHHHHHHHHHHHHh
Confidence 99999999988 78999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccCCCCCCCCCccccCCHHHHHHHHHHHHHhhhcCCeEeeCCcccCCCCceeeeEEEEeCCCCCcccccccccceEEE
Q 015031 241 AWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIGKKGYYIEPTIFTNVTEDMLIAKNEIFGPVMAL 320 (414)
Q Consensus 241 ~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v 320 (414)
++++|+|.++++++||+++..+++++.+++++++.+|+++++||......|+|++|||+.+++++|++++||+||||++|
T Consensus 294 ~~~~g~p~~~~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~vl~gg~~~~~~g~~~~Ptvl~~v~~~~~~~~eE~FGPVl~v 373 (462)
T PRK13968 294 ALKMGDPRDEENALGPMARFDLRDELHHQVEATLAEGARLLLGGEKIAGAGNYYAPTVLANVTPEMTAFREELFGPVAAI 373 (462)
T ss_pred cCCcCCCCCCCCCcCCCCCHHHHHHHHHHHHHHHHCCCEEEeCCCcCCCCceEECCEEEeCCCCCChHHhCCCcCCEEEE
Confidence 99999999999999999999999999999999999999999999765445899999999999999999999999999999
Q ss_pred eeeCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHHhccceeEEEECCcCCCCCCCCccCCCCCCCCCcchHHHHHhhhc
Q 015031 321 MKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSIRAGIIWINCYFAFDSDCPYGGYKMSGFGRDCGLESLHNYLQ 400 (414)
Q Consensus 321 ~~~~~~~eai~~~n~~~~gl~~sv~s~d~~~~~~~~~~l~~g~v~vN~~~~~~~~~pfgG~~~sG~g~~~g~~~~~~~~~ 400 (414)
++|+|.||||+++|+++|||+++|||+|.+.++++++++++|+|+||+.....+.+||||+|.||+|+++|.+|+++||+
T Consensus 374 ~~~~d~~eai~~~n~~~~gLs~~v~t~d~~~a~~~~~~l~~G~v~iN~~~~~~~~~PfGG~k~SG~G~~~G~~~l~~ft~ 453 (462)
T PRK13968 374 TVAKDAEHALELANDSEFGLSATIFTTDETQARQMAARLECGGVFINGYCASDARVAFGGVKKSGFGRELSHFGLHEFCN 453 (462)
T ss_pred EEECCHHHHHHHHhCCCCcceEEEEcCCHHHHHHHHHhCCcceEEECCCCCCCCCCCCCCccccccCcCchHHHHHHhcc
Confidence 99999999999999999999999999999999999999999999999987767789999999999999999999999999
Q ss_pred ccEEEEe
Q 015031 401 VKSVVTP 407 (414)
Q Consensus 401 ~k~i~~~ 407 (414)
.|+|+.+
T Consensus 454 ~k~v~~~ 460 (462)
T PRK13968 454 IQTVWKD 460 (462)
T ss_pred eeEEEEe
Confidence 9999764
|
|
| >cd07141 ALDH_F1AB_F2_RALDH1 NAD+-dependent retinal dehydrogenase 1, ALDH families 1A, 1B, and 2-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-88 Score=691.21 Aligned_cols=406 Identities=57% Similarity=0.945 Sum_probs=383.2
Q ss_pred CHHHHHHHHHhHHHHHHHHHHHcCCChHHHhhccHHHHHHHHHHHHHhhhhhcCceeccccCccccccccCCcEEEEEcC
Q 015031 1 MLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMSRALQGYTLREPIGVVGHIIP 80 (414)
Q Consensus 1 L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p 80 (414)
|+++++.|+++.++|++++++|+|||..++...|+..+++.+++++.++++..+...+...+...+.+++|+|||++|+|
T Consensus 75 L~~~a~~l~~~~~~la~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~a~~~~~~~g~~~~~~~~~~~~~~~~P~GVv~~I~p 154 (481)
T cd07141 75 LNKLADLIERDRAYLASLETLDNGKPFSKSYLVDLPGAIKVLRYYAGWADKIHGKTIPMDGDFFTYTRHEPVGVCGQIIP 154 (481)
T ss_pred HHHHHHHHHHhHHHHHHHHHHHcCCchHHHHHHHHHHHHHHHHHHHHHHHHhcCceecCCCCceEEEEEeceeEEEEEcc
Confidence 57899999999999999999999999976666799999999999999887776654433233456789999999999999
Q ss_pred CCcChHhhHHHHHHHHhcCCeEEEecCCCChhHHHHHHHHHHHcCCCCCeEEEEcCCchhHHHHHHhCCCcCeEEEeCCH
Q 015031 81 WNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGST 160 (414)
Q Consensus 81 ~n~P~~~~~~~~~~ALaaGN~vv~kps~~~~~~~~~l~~~~~~aglp~g~v~~~~~~~~~~~~~l~~~~~~~~v~~tGs~ 160 (414)
||||+...++++++||++||+||+|||+.+|.++..+.+++.++|+|+|++|++++++.+.+..|+.|+++|.|.||||+
T Consensus 155 ~N~P~~~~~~~~~~ALaaGN~VVlKps~~~p~~~~~l~~~l~~aGlP~gvv~~v~g~~~~~~~~L~~~~~vd~V~ftGs~ 234 (481)
T cd07141 155 WNFPLLMAAWKLAPALACGNTVVLKPAEQTPLTALYLASLIKEAGFPPGVVNVVPGYGPTAGAAISSHPDIDKVAFTGST 234 (481)
T ss_pred ChhHHHHHHHHHHHHHHcCCEEEEeCCCCCcHHHHHHHHHHHHcCcCccceEEEecCchHHHHHHhcCCCCCEEEEECcH
Confidence 99999999999999999999999999999999999999999999999999999999777788999999999999999999
Q ss_pred HHHHHHHHHHhhCCCCceeeeCCCCCceeecCCCCHHHHHHHHHHHHhcccCCccccCcEEEEeCccHHHHHHHHHHHHh
Q 015031 161 DVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAK 240 (414)
Q Consensus 161 ~~~~~i~~~~~~~~~~~~~~e~gG~~~~iV~~dadl~~a~~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f~~~l~~~~~ 240 (414)
.+|+.|.+.++..+++|+++|+|||||+||++|||++.|++.+++++|.|+||.|+++++||||+++||+|+++|+++++
T Consensus 235 ~~g~~i~~~aa~~~~~~~~lElGG~~~~iV~~dADl~~A~~~i~~~~~~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~ 314 (481)
T cd07141 235 EVGKLIQQAAGKSNLKRVTLELGGKSPNIVFADADLDYAVEQAHEALFFNMGQCCCAGSRTFVQESIYDEFVKRSVERAK 314 (481)
T ss_pred HHHHHHHHHhhhhcCceEEEEcCCCCeEEECCCCCHHHHHHHHHHHHHhcCCCcccCCeEEEEcHHHHHHHHHHHHHHHH
Confidence 99999999887338899999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccCCCCCCCCCccccCCHHHHHHHHHHHHHhhhcCCeEeeCCcccCCCCceeeeEEEEeCCCCCcccccccccceEEE
Q 015031 241 AWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIGKKGYYIEPTIFTNVTEDMLIAKNEIFGPVMAL 320 (414)
Q Consensus 241 ~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v 320 (414)
++++|+|.|+++++||++++.+++++.+++++++.+|+++++||+...+.|+|++|||+.+++++|++++||+||||++|
T Consensus 315 ~~~~G~p~~~~~~~gpli~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v 394 (481)
T cd07141 315 KRVVGNPFDPKTEQGPQIDEEQFKKILELIESGKKEGAKLECGGKRHGDKGYFIQPTVFSDVTDDMRIAKEEIFGPVQQI 394 (481)
T ss_pred hCCCCCCCCCCCCCcCCCCHHHHHHHHHHHHHHHHCCCEEEeCCCcCCCCCeEEeeEEEecCCCCChhhhccccCCeEEE
Confidence 99999999999999999999999999999999999999999999876557899999999999999999999999999999
Q ss_pred eeeCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHHhccceeEEEECCcCCCCCCCCccCCCCCCCCCcchHHHHHhhhc
Q 015031 321 MKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSIRAGIIWINCYFAFDSDCPYGGYKMSGFGRDCGLESLHNYLQ 400 (414)
Q Consensus 321 ~~~~~~~eai~~~n~~~~gl~~sv~s~d~~~~~~~~~~l~~g~v~vN~~~~~~~~~pfgG~~~sG~g~~~g~~~~~~~~~ 400 (414)
++|+|+||||+++|+++|||++||||+|.+.+.++++++++|+|+||++....+.+||||+|.||+|+++|.+++++||+
T Consensus 395 ~~~~~~~eai~~~n~~~~gLs~~vft~d~~~a~~~~~~l~~G~v~iN~~~~~~~~~PfGG~k~SG~G~~~g~~~~~~ft~ 474 (481)
T cd07141 395 FKFKTIDEVIERANNTTYGLAAAVFTKDIDKAITFSNALRAGTVWVNCYNVVSPQAPFGGYKMSGNGRELGEYGLQEYTE 474 (481)
T ss_pred EeeCCHHHHHHHHhCCCccceEEEECCCHHHHHHHHHhcCcCeEEECCCCCCCCCCCCCCcccCcCCccchHHHHHHHhh
Confidence 99999999999999999999999999999999999999999999999987777889999999999999999999999999
Q ss_pred ccEEEE
Q 015031 401 VKSVVT 406 (414)
Q Consensus 401 ~k~i~~ 406 (414)
+|++++
T Consensus 475 ~k~v~~ 480 (481)
T cd07141 475 VKTVTI 480 (481)
T ss_pred eEEEEE
Confidence 999875
|
NAD+-dependent retinal dehydrogenase 1 (RALDH 1, ALDH1, EC=1.2.1.36) also known as aldehyde dehydrogenase family 1 member A1 (ALDH1A1) in humans, is a homotetrameric, cytosolic enzyme that catalyzes the oxidation of retinaldehyde to retinoic acid. Human ALDH1B1 and ALDH2 are also in this cluster; both are mitochrondrial homotetramers which play important roles in acetaldehyde oxidation; ALDH1B1 in response to UV light exposure and ALDH2 during ethanol metabolism. |
| >cd07117 ALDH_StaphAldA1 Uncharacterized Staphylococcus aureus AldA1 (SACOL0154) aldehyde dehydrogenase-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.3e-88 Score=687.14 Aligned_cols=405 Identities=48% Similarity=0.808 Sum_probs=381.1
Q ss_pred CHHHHHHHHHhHHHHHHHHHHHcCCChHHHhhccHHHHHHHHHHHHHhhhhhcCceeccccCccccccccCCcEEEEEcC
Q 015031 1 MLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMSRALQGYTLREPIGVVGHIIP 80 (414)
Q Consensus 1 L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p 80 (414)
|+++++.|++|+++|++++++|+|||..++...|+..+++.+++++.++++..+...+...+...+.+++|+|||++|+|
T Consensus 66 L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~~i~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~P~GVV~~I~P 145 (475)
T cd07117 66 LNKIADIIDENKELLAMVETLDNGKPIRETRAVDIPLAADHFRYFAGVIRAEEGSANMIDEDTLSIVLREPIGVVGQIIP 145 (475)
T ss_pred HHHHHHHHHHCHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCcccccCCCceeEEEEeecceEEEECC
Confidence 57899999999999999999999999998755699999999999998876655543332234456789999999999999
Q ss_pred CCcChHhhHHHHHHHHhcCCeEEEecCCCChhHHHHHHHHHHHcCCCCCeEEEEcCCchhHHHHHHhCCCcCeEEEeCCH
Q 015031 81 WNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGST 160 (414)
Q Consensus 81 ~n~P~~~~~~~~~~ALaaGN~vv~kps~~~~~~~~~l~~~~~~aglp~g~v~~~~~~~~~~~~~l~~~~~~~~v~~tGs~ 160 (414)
||||+...++++++||++||+||+|||+.+|.++..+.+++.++ +|+|++|++++++.+.+..|+.|+++|.|.||||+
T Consensus 146 wN~Pl~~~~~~i~~AL~aGN~VvlKPs~~~p~~~~~l~~~~~~~-lP~g~~~~v~g~~~~~~~~l~~~~~v~~v~fTGs~ 224 (475)
T cd07117 146 WNFPFLMAAWKLAPALAAGNTVVIKPSSTTSLSLLELAKIIQDV-LPKGVVNIVTGKGSKSGEYLLNHPGLDKLAFTGST 224 (475)
T ss_pred CccHHHHHHHHHHHHHHcCCEEEEECCccCcHHHHHHHHHHHHh-CCcCcEEEEecCcHHHHHHHhcCCCCCEEEEECcH
Confidence 99999999999999999999999999999999999999999986 99999999999777889999999999999999999
Q ss_pred HHHHHHHHHHhhCCCCceeeeCCCCCceeecCCCCHHHHHHHHHHHHhcccCCccccCcEEEEeCccHHHHHHHHHHHHh
Q 015031 161 DVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAK 240 (414)
Q Consensus 161 ~~~~~i~~~~~~~~~~~~~~e~gG~~~~iV~~dadl~~a~~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f~~~l~~~~~ 240 (414)
.+|+.|.+.++ ++++|+++|+|||||+||++|||++.|++.+++++|+|+||.|+++++||||++++|+|+++|++.++
T Consensus 225 ~~g~~i~~~aa-~~~~~~~lElgGk~p~iV~~dADl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~ 303 (475)
T cd07117 225 EVGRDVAIAAA-KKLIPATLELGGKSANIIFDDANWDKALEGAQLGILFNQGQVCCAGSRIFVQEGIYDEFVAKLKEKFE 303 (475)
T ss_pred HHHHHHHHHHh-ccCCcEEEeCCCCCeEEECCCCChHHHHHHHHHHHhhccCCCCCCCeEEEEeHHHHHHHHHHHHHHHH
Confidence 99999999887 88999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccCCCCCCCCCccccCCHHHHHHHHHHHHHhhhcCCeEeeCCcccC----CCCceeeeEEEEeCCCCCcccccccccc
Q 015031 241 AWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIG----KKGYYIEPTIFTNVTEDMLIAKNEIFGP 316 (414)
Q Consensus 241 ~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~----~~g~~~~Ptvl~~~~~~~~~~~~E~fgP 316 (414)
++++|+|.++++++||++++.+++++++++++++++|+++++||.... ++|+|++|||+.+++++|++++||+|||
T Consensus 304 ~l~~g~p~~~~~~~gpli~~~~~~~v~~~v~~a~~~Ga~v~~gg~~~~~~~~~~g~~~~Ptvl~~~~~~~~i~~eE~FgP 383 (475)
T cd07117 304 NVKVGNPLDPDTQMGAQVNKDQLDKILSYVDIAKEEGAKILTGGHRLTENGLDKGFFIEPTLIVNVTNDMRVAQEEIFGP 383 (475)
T ss_pred hccCCCCCCCCCcccCcCCHHHHHHHHHHHHHHHHCCCEEEeCCCcCccccCCCCeEEeeEEeecCCCCChhhhCCCcCC
Confidence 999999999999999999999999999999999999999999997642 3689999999999999999999999999
Q ss_pred eEEEeeeCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHHhccceeEEEECCcCCCCCCCCccCCCCCCCCCcchHHHHH
Q 015031 317 VMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSIRAGIIWINCYFAFDSDCPYGGYKMSGFGRDCGLESLH 396 (414)
Q Consensus 317 vl~v~~~~~~~eai~~~n~~~~gl~~sv~s~d~~~~~~~~~~l~~g~v~vN~~~~~~~~~pfgG~~~sG~g~~~g~~~~~ 396 (414)
|++|++|+|.||||+++|+++|||++||||+|.+.+.++++++++|+|+||+++...+.+||||+|.||+|+++|.+|++
T Consensus 384 vl~v~~~~~~~eai~~~n~~~~gL~~~v~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~PfGG~k~SG~G~~~g~~~~~ 463 (475)
T cd07117 384 VATVIKFKTEDEVIDMANDSEYGLGGGVFTKDINRALRVARAVETGRVWVNTYNQIPAGAPFGGYKKSGIGRETHKSMLD 463 (475)
T ss_pred eEEEEEECCHHHHHHHHhCCCcCceEEEECCCHHHHHHHHHhCCcceEEECCCCCCCCCCCCCCCccCcCCCCchHHHHH
Confidence 99999999999999999999999999999999999999999999999999998777778999999999999999999999
Q ss_pred hhhcccEEEEe
Q 015031 397 NYLQVKSVVTP 407 (414)
Q Consensus 397 ~~~~~k~i~~~ 407 (414)
+||++|+++++
T Consensus 464 ~ft~~k~v~~~ 474 (475)
T cd07117 464 AYTQMKNIYID 474 (475)
T ss_pred HHhCeEEEEEe
Confidence 99999999764
|
Uncharacterized aldehyde dehydrogenase from Staphylococcus aureus (AldA1, locus SACOL0154) and other similar sequences are present in this CD. |
| >cd07143 ALDH_AldA_AN0554 Aspergillus nidulans aldehyde dehydrogenase, AldA (AN0554)-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.3e-88 Score=687.08 Aligned_cols=407 Identities=57% Similarity=0.929 Sum_probs=383.6
Q ss_pred CHHHHHHHHHhHHHHHHHHHHHcCCChHHHhhccHHHHHHHHHHHHHhhhhhcCceeccccCccccccccCCcEEEEEcC
Q 015031 1 MLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMSRALQGYTLREPIGVVGHIIP 80 (414)
Q Consensus 1 L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p 80 (414)
|+++++.|++|+++|++++++|+|||..+....|+..+++.+++++.++++..+...+...+...+..++|+|||++|+|
T Consensus 74 L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~~~~~a~~a~~~~g~~~~~~~~~~~~~~~~P~GVv~~I~P 153 (481)
T cd07143 74 LSKLADLMERNLDYLASIEALDNGKTFGTAKRVDVQASADTFRYYGGWADKIHGQVIETDIKKLTYTRHEPIGVCGQIIP 153 (481)
T ss_pred HHHHHHHHHHhHHHHHHHHHHHcCCChHHHHHHHHHHHHHHHHHHHHHHHHhcCccccCCCCceEEEEEecceeEEEECC
Confidence 57899999999999999999999999976656799999999999999987765543332234456789999999999999
Q ss_pred CCcChHhhHHHHHHHHhcCCeEEEecCCCChhHHHHHHHHHHHcCCCCCeEEEEcCCchhHHHHHHhCCCcCeEEEeCCH
Q 015031 81 WNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGST 160 (414)
Q Consensus 81 ~n~P~~~~~~~~~~ALaaGN~vv~kps~~~~~~~~~l~~~~~~aglp~g~v~~~~~~~~~~~~~l~~~~~~~~v~~tGs~ 160 (414)
||||+...++++++||++||+||+|||+.+|.++..+.+++.++|+|+|++|++++++.+.++.|..||.+|.|.||||+
T Consensus 154 ~N~P~~~~~~~~~~ALaaGN~VvlKps~~~p~~~~~l~~~l~~aGlP~g~v~~v~g~~~~~~~~L~~~~~vd~V~fTGs~ 233 (481)
T cd07143 154 WNFPLLMCAWKIAPALAAGNTIVLKPSELTPLSALYMTKLIPEAGFPPGVINVVSGYGRTCGNAISSHMDIDKVAFTGST 233 (481)
T ss_pred CcChHHHHHHHHHHHHHcCCEEEEeCCCCCcHHHHHHHHHHHhcCcCcccEEEEeCCchhHHHHHhcCCCCCEEEEECch
Confidence 99999999999999999999999999999999999999999999999999999999777889999999999999999999
Q ss_pred HHHHHHHHHHhhCCCCceeeeCCCCCceeecCCCCHHHHHHHHHHHHhcccCCccccCcEEEEeCccHHHHHHHHHHHHh
Q 015031 161 DVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAK 240 (414)
Q Consensus 161 ~~~~~i~~~~~~~~~~~~~~e~gG~~~~iV~~dadl~~a~~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f~~~l~~~~~ 240 (414)
.+|+.|.+.++...++|+++|+||+||+||++|||++.|++.+++++|+|+||.|+++++||||++++|+|+++|+++++
T Consensus 234 ~~G~~i~~~aa~~~~~~~~lElGG~~p~iV~~dADl~~Aa~~i~~~~~~naGQ~C~a~~rv~V~~~i~d~f~~~l~~~~~ 313 (481)
T cd07143 234 LVGRKVMEAAAKSNLKKVTLELGGKSPNIVFDDADLESAVVWTAYGIFFNHGQVCCAGSRIYVQEGIYDKFVKRFKEKAK 313 (481)
T ss_pred HHHHHHHHHHHHhcCCEEEeecCCCCeeEECCCCCHHHHHHHHHHHHHhccCCCCCCCcEEEEeHhHHHHHHHHHHHHHH
Confidence 99999999887337899999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccCCCCCCCCCccccCCHHHHHHHHHHHHHhhhcCCeEeeCCcccCCCCceeeeEEEEeCCCCCcccccccccceEEE
Q 015031 241 AWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIGKKGYYIEPTIFTNVTEDMLIAKNEIFGPVMAL 320 (414)
Q Consensus 241 ~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v 320 (414)
++++|+|.++++++||++++.+++++++++++++.+|+++++||....+.|+|+.|||+.+++++|++++||+||||++|
T Consensus 314 ~~~~G~p~~~~~~~gpli~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v 393 (481)
T cd07143 314 KLKVGDPFAEDTFQGPQVSQIQYERIMSYIESGKAEGATVETGGKRHGNEGYFIEPTIFTDVTEDMKIVKEEIFGPVVAV 393 (481)
T ss_pred hcCCCCCCCCCCCCCCCcCHHHHHHHHHHHHHHHhCCCEEEeCCCCCCCCceEEeeEEEecCCCCChhhhcCCcCCeEEE
Confidence 99999999999999999999999999999999999999999999875557899999999999999999999999999999
Q ss_pred eeeCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHHhccceeEEEECCcCCCCCCCCccCCCCCCCCCcchHHHHHhhhc
Q 015031 321 MKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSIRAGIIWINCYFAFDSDCPYGGYKMSGFGRDCGLESLHNYLQ 400 (414)
Q Consensus 321 ~~~~~~~eai~~~n~~~~gl~~sv~s~d~~~~~~~~~~l~~g~v~vN~~~~~~~~~pfgG~~~sG~g~~~g~~~~~~~~~ 400 (414)
++|+|.+|||+++|++++||++||||+|.+.+.++++++++|+|+||+.....+.+||||+|.||+|+++|.+++++||+
T Consensus 394 ~~~~~~~eai~~~n~~~~gL~~~v~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~PfGG~k~SG~G~~~G~~~l~~~t~ 473 (481)
T cd07143 394 IKFKTEEEAIKRANDSTYGLAAAVFTNNINNAIRVANALKAGTVWVNCYNLLHHQVPFGGYKQSGIGRELGEYALENYTQ 473 (481)
T ss_pred EeeCCHHHHHHHHhCCCCCceEEEECCCHHHHHHHHHhcCcCeEEECCCCCCCCCCCCCCccccccCcccHHHHHHHHhC
Confidence 99999999999999999999999999999999999999999999999987777889999999999999999999999999
Q ss_pred ccEEEEe
Q 015031 401 VKSVVTP 407 (414)
Q Consensus 401 ~k~i~~~ 407 (414)
+|+++++
T Consensus 474 ~k~i~~~ 480 (481)
T cd07143 474 IKAVHIN 480 (481)
T ss_pred eEEEEEe
Confidence 9999765
|
NAD(P)+-dependent aldehyde dehydrogenase (AldA) of Aspergillus nidulans (locus AN0554), and other similar sequences, are present in this CD. |
| >PRK09406 gabD1 succinic semialdehyde dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.9e-88 Score=683.40 Aligned_cols=403 Identities=33% Similarity=0.554 Sum_probs=377.9
Q ss_pred CHHHHHHHHHhHHHHHHHHHHHcCCChHHHhhccHHHHHHHHHHHHHhhhhhcCceecc---ccCccccccccCCcEEEE
Q 015031 1 MLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKM---SRALQGYTLREPIGVVGH 77 (414)
Q Consensus 1 L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~~~~~~~~~~~~---~~~~~~~~~~~P~Gvv~~ 77 (414)
|++++++|++++++|++++++|+|||..++ ..|+..+++.+++++..+++........ ..+...+++++|+|||++
T Consensus 51 L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a-~~ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GvV~~ 129 (457)
T PRK09406 51 ANAAADLLEAEADQVAALMTLEMGKTLASA-KAEALKCAKGFRYYAEHAEALLADEPADAAAVGASRAYVRYQPLGVVLA 129 (457)
T ss_pred HHHHHHHHHHCHHHHHHHHHHhcCCCHHHH-HHHHHHHHHHHHHHHHHHHHHhCCccccccCCCCceEEEEEecceeEEE
Confidence 578999999999999999999999999975 5699999999999998887654432111 122356788999999999
Q ss_pred EcCCCcChHhhHHHHHHHHhcCCeEEEecCCCChhHHHHHHHHHHHcCCCCCeEEEEcCCchhHHHHHHhCCCcCeEEEe
Q 015031 78 IIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFT 157 (414)
Q Consensus 78 i~p~n~P~~~~~~~~~~ALaaGN~vv~kps~~~~~~~~~l~~~~~~aglp~g~v~~~~~~~~~~~~~l~~~~~~~~v~~t 157 (414)
|+|||||++..++++++||++||+||+|||+.+|.++..+.+++.++|+|+|++|++++ +.+.+..|+.|++++.|.||
T Consensus 130 I~PwN~Pl~~~~~~~~~ALaaGN~VV~Kps~~~p~~~~~l~~l~~~aGlP~gvv~~v~~-g~~~~~~l~~~~~i~~V~fT 208 (457)
T PRK09406 130 VMPWNFPLWQVVRFAAPALMAGNVGLLKHASNVPQTALYLADLFRRAGFPDGCFQTLLV-GSGAVEAILRDPRVAAATLT 208 (457)
T ss_pred ECCccchHHHHHHHHHHHHHcCCEEEEECCCcCcHHHHHHHHHHHHhCCCcCcEEEEcC-CchhHHHHhcCCCcCEEEEE
Confidence 99999999999999999999999999999999999999999999999999999999986 34567889999999999999
Q ss_pred CCHHHHHHHHHHHhhCCCCceeeeCCCCCceeecCCCCHHHHHHHHHHHHhcccCCccccCcEEEEeCccHHHHHHHHHH
Q 015031 158 GSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVE 237 (414)
Q Consensus 158 Gs~~~~~~i~~~~~~~~~~~~~~e~gG~~~~iV~~dadl~~a~~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f~~~l~~ 237 (414)
||+++|+.|.+.++ ++++|+++|+||+||+||++|||++.|++.+++++|.|+||.|+++++||||++++|+|+++|++
T Consensus 209 Gs~~~G~~i~~~a~-~~~~~~~lElGG~~~~iV~~dadl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~ 287 (457)
T PRK09406 209 GSEPAGRAVAAIAG-DEIKKTVLELGGSDPFIVMPSADLDRAAETAVTARVQNNGQSCIAAKRFIVHADVYDAFAEKFVA 287 (457)
T ss_pred CcHHHHHHHHHHHH-hcCCceeeecCCCCeeEECCCCCHHHHHHHHHHHHhhCCCCcccCCeEEEEcHHHHHHHHHHHHH
Confidence 99999999999887 78999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhccccCCCCCCCCCccccCCHHHHHHHHHHHHHhhhcCCeEeeCCcccCCCCceeeeEEEEeCCCCCcccccccccce
Q 015031 238 KAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIGKKGYYIEPTIFTNVTEDMLIAKNEIFGPV 317 (414)
Q Consensus 238 ~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPv 317 (414)
+++++++|+|.++++++||++++.+++++++++++++++|+++++||.....+|+|++|||+.+++++|.+++||+||||
T Consensus 288 ~~~~l~~g~p~~~~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~~l~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPv 367 (457)
T PRK09406 288 RMAALRVGDPTDPDTDVGPLATEQGRDEVEKQVDDAVAAGATILCGGKRPDGPGWFYPPTVITDITPDMRLYTEEVFGPV 367 (457)
T ss_pred HHhhCCCCCCCCCCCCCCCCcCHHHHHHHHHHHHHHHHCCCEEEeCCCcCCCCCceEccEEeecCCCCCHHhhCCCCCce
Confidence 99999999999999999999999999999999999999999999999875557999999999999999999999999999
Q ss_pred EEEeeeCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHHhccceeEEEECCcCCCCCCCCccCCCCCCCCCcchHHHHHh
Q 015031 318 MALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSIRAGIIWINCYFAFDSDCPYGGYKMSGFGRDCGLESLHN 397 (414)
Q Consensus 318 l~v~~~~~~~eai~~~n~~~~gl~~sv~s~d~~~~~~~~~~l~~g~v~vN~~~~~~~~~pfgG~~~sG~g~~~g~~~~~~ 397 (414)
++|++|+|.+|||+++|+++|||++||||+|.+.++++++++++|+|+||+.+...+.+||||+|.||+|+++|.+++++
T Consensus 368 l~v~~~~~~~eai~~~n~~~~gL~~~v~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~PfGG~k~SG~G~~~g~~~l~~ 447 (457)
T PRK09406 368 ASLYRVADIDEAIEIANATTFGLGSNAWTRDEAEQERFIDDLEAGQVFINGMTVSYPELPFGGVKRSGYGRELSAHGIRE 447 (457)
T ss_pred EEEEeeCCHHHHHHHHhCCCCCceEEEEcCCHHHHHHHHHhCCcceEEECCCCCCCCCCCCCCccccccCccchHHHHHH
Confidence 99999999999999999999999999999999999999999999999999988777889999999999999999999999
Q ss_pred hhcccEEEE
Q 015031 398 YLQVKSVVT 406 (414)
Q Consensus 398 ~~~~k~i~~ 406 (414)
||+.|++++
T Consensus 448 ~t~~k~v~~ 456 (457)
T PRK09406 448 FCNIKTVWI 456 (457)
T ss_pred hhceEEEEe
Confidence 999999864
|
|
| >PRK13252 betaine aldehyde dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.8e-88 Score=688.50 Aligned_cols=406 Identities=46% Similarity=0.782 Sum_probs=381.4
Q ss_pred CHHHHHHHHHhHHHHHHHHHHHcCCChHHHhhccHHHHHHHHHHHHHhhhhhcCceeccccCccccccccCCcEEEEEcC
Q 015031 1 MLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMSRALQGYTLREPIGVVGHIIP 80 (414)
Q Consensus 1 L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p 80 (414)
|++++++|++|+++|++++++|+|||..++...|+..+++.++++++.++...+...+...+...+.+++|+|||++|+|
T Consensus 72 L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~~~~~~~~~g~~~~~~~~~~~~~~~~PlGVv~~I~p 151 (488)
T PRK13252 72 LRRAVDILRERNDELAALETLDTGKPIQETSVVDIVTGADVLEYYAGLAPALEGEQIPLRGGSFVYTRREPLGVCAGIGA 151 (488)
T ss_pred HHHHHHHHHHhHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCceeccCCCceEEEEEeeeeEEEEECC
Confidence 57899999999999999999999999997655699999999999998887665544332234456789999999999999
Q ss_pred CCcChHhhHHHHHHHHhcCCeEEEecCCCChhHHHHHHHHHHHcCCCCCeEEEEcCCchhHHHHHHhCCCcCeEEEeCCH
Q 015031 81 WNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGST 160 (414)
Q Consensus 81 ~n~P~~~~~~~~~~ALaaGN~vv~kps~~~~~~~~~l~~~~~~aglp~g~v~~~~~~~~~~~~~l~~~~~~~~v~~tGs~ 160 (414)
||||+...++++++||++||+||+|||+.+|.++..+.+++.++|+|+|++|++++++. .++.|+.||++|.|.||||+
T Consensus 152 ~N~P~~~~~~~~~~ALaaGN~Vv~Kps~~~p~t~~~l~~~~~~aglP~g~v~~v~g~~~-~~~~L~~~~~vd~V~fTGS~ 230 (488)
T PRK13252 152 WNYPIQIACWKSAPALAAGNAMIFKPSEVTPLTALKLAEIYTEAGLPDGVFNVVQGDGR-VGAWLTEHPDIAKVSFTGGV 230 (488)
T ss_pred CchHHHHHHHHHHHHHhcCCeEEEeCCccCcHHHHHHHHHHHHcCcCcccEEEEecCcH-HHHHHhcCCCCCEEEEECcH
Confidence 99999999999999999999999999999999999999999999999999999998665 88999999999999999999
Q ss_pred HHHHHHHHHHhhCCCCceeeeCCCCCceeecCCCCHHHHHHHHHHHHhcccCCccccCcEEEEeCccHHHHHHHHHHHHh
Q 015031 161 DVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAK 240 (414)
Q Consensus 161 ~~~~~i~~~~~~~~~~~~~~e~gG~~~~iV~~dadl~~a~~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f~~~l~~~~~ 240 (414)
++|+.|.+.++ .+++|+++|+|||||+||++|||++.|++.+++++|.|+||.|+++++||||++++|+|+++|+++++
T Consensus 231 ~~g~~i~~~aa-~~l~~~~lElgG~~p~iV~~dAdl~~A~~~i~~~~~~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~ 309 (488)
T PRK13252 231 PTGKKVMAAAA-ASLKEVTMELGGKSPLIVFDDADLDRAADIAMLANFYSSGQVCTNGTRVFVQKSIKAAFEARLLERVE 309 (488)
T ss_pred HHHHHHHHHHh-hcCCcEEEEcCCCCeeEECCCCCHHHHHHHHHHHHHhhcCCCCCCCeEEEEcHHHHHHHHHHHHHHHH
Confidence 99999999887 77999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccCCCCCCCCCccccCCHHHHHHHHHHHHHhhhcCCeEeeCCcccC----CCCceeeeEEEEeCCCCCcccccccccc
Q 015031 241 AWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIG----KKGYYIEPTIFTNVTEDMLIAKNEIFGP 316 (414)
Q Consensus 241 ~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~----~~g~~~~Ptvl~~~~~~~~~~~~E~fgP 316 (414)
++++|+|.++++++||++++.+++++++++++++++|+++++||.... .+|+|++|||+.+++++|++++||+|||
T Consensus 310 ~~~~g~p~~~~~~~gpli~~~~~~~~~~~i~~a~~~Ga~vl~gg~~~~~~~~~~g~~~~Ptvl~~v~~~~~i~~eE~FgP 389 (488)
T PRK13252 310 RIRIGDPMDPATNFGPLVSFAHRDKVLGYIEKGKAEGARLLCGGERLTEGGFANGAFVAPTVFTDCTDDMTIVREEIFGP 389 (488)
T ss_pred hcCCCCCCCCCCcccccCCHHHHHHHHHHHHHHHHCCCEEEeCCcccccccCCCCeEEccEEeccCCCCChHhhCCCCCc
Confidence 999999999999999999999999999999999999999999996432 3589999999999999999999999999
Q ss_pred eEEEeeeCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHHhccceeEEEECCcCCCCCCCCccCCCCCCCCCcchHHHHH
Q 015031 317 VMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSIRAGIIWINCYFAFDSDCPYGGYKMSGFGRDCGLESLH 396 (414)
Q Consensus 317 vl~v~~~~~~~eai~~~n~~~~gl~~sv~s~d~~~~~~~~~~l~~g~v~vN~~~~~~~~~pfgG~~~sG~g~~~g~~~~~ 396 (414)
|++|++|+|.||||+++|+++|||++||||+|.+.++++++++++|.|+||++....+.+||||+|.||+|+++|.+|++
T Consensus 390 vl~v~~~~~~~eai~~~n~~~~gL~a~I~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~PfGG~k~SG~G~~~g~~~~~ 469 (488)
T PRK13252 390 VMSVLTFDDEDEVIARANDTEYGLAAGVFTADLSRAHRVIHQLEAGICWINTWGESPAEMPVGGYKQSGIGRENGIATLE 469 (488)
T ss_pred eEEEEeeCCHHHHHHHHhCCCCCCeEEEEeCCHHHHHHHHHhcCccEEEECCCCCCCCCCCCCCCccCcCCcCChHHHHH
Confidence 99999999999999999999999999999999999999999999999999997766678999999999999999999999
Q ss_pred hhhcccEEEEeC
Q 015031 397 NYLQVKSVVTPI 408 (414)
Q Consensus 397 ~~~~~k~i~~~~ 408 (414)
+||++|+|+.+.
T Consensus 470 ~ft~~k~i~~~~ 481 (488)
T PRK13252 470 HYTQIKSVQVEM 481 (488)
T ss_pred HhcceEEEEEeC
Confidence 999999998764
|
|
| >cd07559 ALDH_ACDHII_AcoD-like Ralstonia eutrophus NAD+-dependent acetaldehyde dehydrogenase II and Staphylococcus aureus AldA1 (SACOL0154)-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.3e-88 Score=686.57 Aligned_cols=405 Identities=49% Similarity=0.822 Sum_probs=382.2
Q ss_pred CHHHHHHHHHhHHHHHHHHHHHcCCChHHHhhccHHHHHHHHHHHHHhhhhhcCceeccccCccccccccCCcEEEEEcC
Q 015031 1 MLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMSRALQGYTLREPIGVVGHIIP 80 (414)
Q Consensus 1 L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p 80 (414)
|+++++.|++|+++|++++++|+||+..++...|+..+++.+++++.++++..+...+...+...+..++|+|||++|+|
T Consensus 66 L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~P~GVV~~I~P 145 (480)
T cd07559 66 LNKIADRIEENLELLAVAETLDNGKPIRETLAADIPLAIDHFRYFAGVIRAQEGSLSEIDEDTLSYHFHEPLGVVGQIIP 145 (480)
T ss_pred HHHHHHHHHHhHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCccccCCCCceeEEEEeccceEEEECC
Confidence 57899999999999999999999999998766799999999999998887655543333334557788999999999999
Q ss_pred CCcChHhhHHHHHHHHhcCCeEEEecCCCChhHHHHHHHHHHHcCCCCCeEEEEcCCchhHHHHHHhCCCcCeEEEeCCH
Q 015031 81 WNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGST 160 (414)
Q Consensus 81 ~n~P~~~~~~~~~~ALaaGN~vv~kps~~~~~~~~~l~~~~~~aglp~g~v~~~~~~~~~~~~~l~~~~~~~~v~~tGs~ 160 (414)
||||+...++++++||++||+||+|||+.+|.++..+++++.++ +|+|++|++++++.+.++.|+.||++|.|.||||+
T Consensus 146 wN~P~~~~~~~i~~ALaaGN~VV~KPs~~tp~~~~~l~~l~~~~-lP~gvv~~v~g~~~~~~~~L~~~~~v~~V~fTGs~ 224 (480)
T cd07559 146 WNFPLLMAAWKLAPALAAGNTVVLKPASQTPLSILVLMELIGDL-LPKGVVNVVTGFGSEAGKPLASHPRIAKLAFTGST 224 (480)
T ss_pred CchHHHHHHHHHHHHHHcCCEEEEECchhhhHHHHHHHHHHHHh-CCcCeEEEEecCchHHHHHHhcCCCCCEEEEECcH
Confidence 99999999999999999999999999999999999999999997 99999999999877889999999999999999999
Q ss_pred HHHHHHHHHHhhCCCCceeeeCCCCCceeecCCC-----CHHHHHHHHHHHHhcccCCccccCcEEEEeCccHHHHHHHH
Q 015031 161 DVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDV-----DVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKL 235 (414)
Q Consensus 161 ~~~~~i~~~~~~~~~~~~~~e~gG~~~~iV~~da-----dl~~a~~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f~~~l 235 (414)
.+|+.|.+.++ ++++|+++|+|||||+||++|| |++.|++.+++++|+|+||.|++++|||||++++|+|+++|
T Consensus 225 ~~g~~i~~~aa-~~~~p~~lElGGk~p~iV~~dA~~~~~Dl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~d~f~~~l 303 (480)
T cd07559 225 TVGRLIMQYAA-ENLIPVTLELGGKSPNIFFDDAMDADDDFDDKAEEGQLGFAFNQGEVCTCPSRALVQESIYDEFIERA 303 (480)
T ss_pred HHHHHHHHHHh-ccCCcEEeccCCCCeEEEcCCccccccCHHHHHHHHHHHHHhhCCCCCCCCeEEEEcHHHHHHHHHHH
Confidence 99999999987 8899999999999999999999 99999999999999999999999999999999999999999
Q ss_pred HHHHhccccCCCCCCCCCccccCCHHHHHHHHHHHHHhhhcCCeEeeCCcccC----CCCceeeeEEEEeCCCCCccccc
Q 015031 236 VEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIG----KKGYYIEPTIFTNVTEDMLIAKN 311 (414)
Q Consensus 236 ~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~----~~g~~~~Ptvl~~~~~~~~~~~~ 311 (414)
+++++++++|+|.|+++++||++++.+++++++++++++++|+++++||.... ..|+|++|||+.+++++|++++|
T Consensus 304 ~~~~~~l~~G~p~~~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~v~~gg~~~~~~~~~~g~~~~Ptvl~~~~~~~~~~~e 383 (480)
T cd07559 304 VERFEAIKVGNPLDPETMMGAQVSKDQLEKILSYVDIGKEEGAEVLTGGERLTLGGLDKGYFYEPTLIKGGNNDMRIFQE 383 (480)
T ss_pred HHHHHhCCCCCCCCCCCcCCCCcCHHHHHHHHHHHHHHHHCCCEEEeCCCcCccccCCCCcEECeEEEeCCCCCCcHHhc
Confidence 99999999999999999999999999999999999999999999999997643 36899999999999999999999
Q ss_pred ccccceEEEeeeCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHHhccceeEEEECCcCCCCCCCCccCCCCCCCCCcch
Q 015031 312 EIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSIRAGIIWINCYFAFDSDCPYGGYKMSGFGRDCG 391 (414)
Q Consensus 312 E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~sv~s~d~~~~~~~~~~l~~g~v~vN~~~~~~~~~pfgG~~~sG~g~~~g 391 (414)
|+||||++|++|+|.||||+++|+++|||+++|||+|.+.+.++++++++|+|+||++....+.+||||+|.||+|+++|
T Consensus 384 E~FgPvl~v~~~~~~~eai~~~n~~~~gL~~~v~t~d~~~a~~~a~~l~~G~v~iN~~~~~~~~~PfGG~k~SG~G~~~g 463 (480)
T cd07559 384 EIFGPVLAVITFKDEEEAIAIANDTEYGLGGGVWTRDINRALRVARGIQTGRVWVNCYHQYPAHAPFGGYKKSGIGRETH 463 (480)
T ss_pred CCcCceEEEEeeCCHHHHHHHHhCCCCCCeEEEECCCHHHHHHHHHhcCcceEEECCCCCCCCCCCcCCCccCcCCccCh
Confidence 99999999999999999999999999999999999999999999999999999999877777789999999999999999
Q ss_pred HHHHHhhhcccEEEEe
Q 015031 392 LESLHNYLQVKSVVTP 407 (414)
Q Consensus 392 ~~~~~~~~~~k~i~~~ 407 (414)
.+++++||++|+++++
T Consensus 464 ~~~~~~~~~~k~v~~~ 479 (480)
T cd07559 464 KMMLDHYQQTKNILVS 479 (480)
T ss_pred HHHHHHhhceEEEEEe
Confidence 9999999999999764
|
Included in this CD is the NAD+-dependent, acetaldehyde dehydrogenase II (AcDHII, AcoD, EC=1.2.1.3) from Ralstonia (Alcaligenes) eutrophus H16 involved in the catabolism of acetoin and ethanol, and similar proteins, such as, the dimeric dihydrolipoamide dehydrogenase of the acetoin dehydrogenase enzyme system of Klebsiella pneumonia. Also included are sequences similar to the NAD+-dependent chloroacetaldehyde dehydrogenases (AldA and AldB) of Xanthobacter autotrophicus GJ10 which are involved in the degradation of 1,2-dichloroethane, as well as, the uncharacterized aldehyde dehydrogenase from Staphylococcus aureus (AldA1, locus SACOL0154) and other similar sequences. |
| >TIGR03216 OH_muco_semi_DH 2-hydroxymuconic semialdehyde dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.7e-88 Score=686.80 Aligned_cols=406 Identities=40% Similarity=0.702 Sum_probs=379.3
Q ss_pred CHHHHHHHHHhHHHHHHHHHHHcCCChHHHhhccHHHHHHHHHHHHHhhhhhcCceecc--c--cCccccccccCCcEEE
Q 015031 1 MLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKM--S--RALQGYTLREPIGVVG 76 (414)
Q Consensus 1 L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~~~~~~~~~~~~--~--~~~~~~~~~~P~Gvv~ 76 (414)
|++++++|++|+++|++++++|+|||..++...|+..+++.++++++.+++..+...+. . .+...+.+++|+|||+
T Consensus 65 L~~~a~~l~~~~~ela~~~~~e~Gk~~~~~~~~ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~ 144 (481)
T TIGR03216 65 LYAVADEIERRFDDFLAAEVADTGKPRSLASHLDIPRGAANFRVFADVVKNAPTECFEMATPDGKGALNYAVRKPLGVVG 144 (481)
T ss_pred HHHHHHHHHHhHHHHHHHHHHHcCCcHHHHhHHHHHHHHHHHHHHHHHHHHhcCccccccCCCCCCceeEEEEeccceEE
Confidence 57899999999999999999999999987655699999999999998876654443221 1 1234568899999999
Q ss_pred EEcCCCcChHhhHHHHHHHHhcCCeEEEecCCCChhHHHHHHHHHHHcCCCCCeEEEEcCCch-hHHHHHHhCCCcCeEE
Q 015031 77 HIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGP-TAGAAIASHMDIDKVS 155 (414)
Q Consensus 77 ~i~p~n~P~~~~~~~~~~ALaaGN~vv~kps~~~~~~~~~l~~~~~~aglp~g~v~~~~~~~~-~~~~~l~~~~~~~~v~ 155 (414)
+|+|||||+...++++++||++||+||+|||+.+|.++..+.+++.++|+|+|++|+++|++. +.++.|..||++|.|.
T Consensus 145 ~I~p~N~Pl~~~~~~~~~ALaaGN~vvlKPs~~tp~t~~~l~~l~~~aglP~g~~~~v~g~~~~~~~~~l~~~~~vd~v~ 224 (481)
T TIGR03216 145 VISPWNLPLLLMTWKVGPALACGNTVVVKPSEETPGTATLLGEVMNAVGVPKGVYNVVHGFGPDSAGEFLTRHPGVDAIT 224 (481)
T ss_pred EECCCCcHHHHHHHHHHHHHHcCCEEEEECCccchHHHHHHHHHHHHcCCCcCceEEEecCChhHHHHHHhcCCCCCEEE
Confidence 999999999999999999999999999999999999999999999999999999999998654 4788899999999999
Q ss_pred EeCCHHHHHHHHHHHhhCCCCceeeeCCCCCceeecCCCCHHHHHHHHHHHHhcccCCccccCcEEEEeCccHHHHHHHH
Q 015031 156 FTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKL 235 (414)
Q Consensus 156 ~tGs~~~~~~i~~~~~~~~~~~~~~e~gG~~~~iV~~dadl~~a~~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f~~~l 235 (414)
||||+.+|+.|.+.++ ++++|+++|+||+||+||++|||++.|++.+++++|.|+||.|++++++|||++++|+|+++|
T Consensus 225 fTGS~~~G~~i~~~aa-~~~~~~~lElgG~n~~iV~~dadl~~aa~~i~~~~f~~~GQ~C~a~~rv~V~~~i~~~f~~~l 303 (481)
T TIGR03216 225 FTGETRTGSAIMKAAA-DGVKPVSFELGGKNAAIVFADCDFDAAVAGILRSAFLNTGQVCLGTERVYVERPIFDRFVAAL 303 (481)
T ss_pred EECCHHHHHHHHHHHh-cCCCeEEEECCCCCeEEECCCCCHHHHHHHHHHHHHhcCCCCCCCCeEEEEcHHHHHHHHHHH
Confidence 9999999999999987 788999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhccccCCCCCCCCCccccCCHHHHHHHHHHHHHhhhcCCeEeeCCcccC-----CCCceeeeEEEEeCCCCCcccc
Q 015031 236 VEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIG-----KKGYYIEPTIFTNVTEDMLIAK 310 (414)
Q Consensus 236 ~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~-----~~g~~~~Ptvl~~~~~~~~~~~ 310 (414)
+++++++++|+|.++++++||++++.+++++++++++++++|+++++||.... .+|+|++|||+.+++++|++++
T Consensus 304 ~~~~~~~~~g~p~~~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~v~~gg~~~~~~~~~~~g~~~~PTvl~~v~~~~~i~~ 383 (481)
T TIGR03216 304 KARAESLKIGVPDDPATNMGPLISAEHRDKVLSYYALAVEEGATVVTGGGVPDFGDALAGGAWVQPTIWTGLPDSARVVT 383 (481)
T ss_pred HHHHHhcCCCCCCCCCCcCCCCCCHHHHHHHHHHHHHHHHCCCEEEeCCCcccccccCCCCceEccEEEeCCCCCCHHHh
Confidence 99999999999999999999999999999999999999999999999997532 3699999999999999999999
Q ss_pred cccccceEEEeeeCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHHhccceeEEEECCcCCCCCCCCccCCCCCCCCCcc
Q 015031 311 NEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSIRAGIIWINCYFAFDSDCPYGGYKMSGFGRDC 390 (414)
Q Consensus 311 ~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~sv~s~d~~~~~~~~~~l~~g~v~vN~~~~~~~~~pfgG~~~sG~g~~~ 390 (414)
||+||||++|++|+|.||||+++|+++|||++||||+|.+.++++++++++|.|+||++....+.+||||+|.||+|+++
T Consensus 384 eE~FgPvl~V~~~~~~~eai~~~n~~~~gL~~~v~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~PfGG~k~SG~G~~~ 463 (481)
T TIGR03216 384 EEIFGPCCHIAPFDSEEEVIALANDTPYGLAASVWTEDLSRAHRVARQMEVGIVWVNSWFLRDLRTPFGGSKLSGIGREG 463 (481)
T ss_pred CCCCCceEEEEEeCCHHHHHHHHhCCCccceEEEECCCHHHHHHHHHhcCccEEEECCCCCCCCCCCcCCcccCcCCcCc
Confidence 99999999999999999999999999999999999999999999999999999999998777778999999999999999
Q ss_pred hHHHHHhhhcccEEEEe
Q 015031 391 GLESLHNYLQVKSVVTP 407 (414)
Q Consensus 391 g~~~~~~~~~~k~i~~~ 407 (414)
|.+|+++||++|+++++
T Consensus 464 g~~~l~~f~~~k~v~~~ 480 (481)
T TIGR03216 464 GVHSLEFYTELTNVCIK 480 (481)
T ss_pred hHHHHHHhhceEEEEEe
Confidence 99999999999999765
|
Members of this protein family are 2-hydroxymuconic semialdehyde dehydrogenase. Many aromatic compounds are catabolized by way of the catechol, via the meta-cleavage pathway, to pyruvate and acetyl-CoA. This enzyme performs the second of seven steps in that pathway for catechol degradation. |
| >cd07120 ALDH_PsfA-ACA09737 Pseudomonas putida aldehyde dehydrogenase PsfA (ACA09737)-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.4e-88 Score=681.00 Aligned_cols=403 Identities=40% Similarity=0.659 Sum_probs=380.6
Q ss_pred CHHHHHHHHHhHHHHHHHHHHHcCCChHHHhhccHHHHHHHHHHHHHhhhhhcCceeccccCccccccccCCcEEEEEcC
Q 015031 1 MLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMSRALQGYTLREPIGVVGHIIP 80 (414)
Q Consensus 1 L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p 80 (414)
|++++++|++|+++|++++++|+|||..++ ..|+..+++.++++++.+++..+...+...+...+.+++|+|||++|+|
T Consensus 48 L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a-~~Ev~~~i~~l~~~~~~~~~~~g~~~~~~~~~~~~~~~~P~Gvv~~I~P 126 (455)
T cd07120 48 LLELADAFEANAERLARLLALENGKILGEA-RFEISGAISELRYYAGLARTEAGRMIEPEPGSFSLVLREPMGVAGIIVP 126 (455)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHcCCCHHHH-HHHHHHHHHHHHHHHHHHHHhcCcccccCCCceEEEEEecceeEEEECC
Confidence 578999999999999999999999999976 4699999999999998887765544332234567899999999999999
Q ss_pred CCcChHhhHHHHHHHHhcCCeEEEecCCCChhHHHHHHHHHHH-cCCCCCeEEEEcCCchhHHHHHHhCCCcCeEEEeCC
Q 015031 81 WNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKL-AGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGS 159 (414)
Q Consensus 81 ~n~P~~~~~~~~~~ALaaGN~vv~kps~~~~~~~~~l~~~~~~-aglp~g~v~~~~~~~~~~~~~l~~~~~~~~v~~tGs 159 (414)
||||+...++++++||++||+||+|||+.+|.++..+.+++.+ +|+|+|++|++++++.+.++.|+.||+++.|.||||
T Consensus 127 ~N~P~~~~~~~~~~AL~aGN~vvlKps~~~~~~~~~l~~~~~~aag~P~g~~~~v~g~~~~~~~~l~~~~~v~~v~fTGs 206 (455)
T cd07120 127 WNSPVVLLVRSLAPALAAGCTVVVKPAGQTAQINAAIIRILAEIPSLPAGVVNLFTESGSEGAAHLVASPDVDVISFTGS 206 (455)
T ss_pred CchHHHHHHHHHHHHHHcCCEEEeECCCCChHHHHHHHHHHHHhcCCCccceEEEecCchhHHHHHhcCCCCCEEEEECC
Confidence 9999999999999999999999999999999999999999999 799999999999977788999999999999999999
Q ss_pred HHHHHHHHHHHhhCCCCceeeeCCCCCceeecCCCCHHHHHHHHHHHHhcccCCccccCcEEEEeCccHHHHHHHHHHHH
Q 015031 160 TDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKA 239 (414)
Q Consensus 160 ~~~~~~i~~~~~~~~~~~~~~e~gG~~~~iV~~dadl~~a~~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f~~~l~~~~ 239 (414)
+.+|+.|.+.++ ++++|+++|+||+||+||++|+|++.|++.+++++|.|+||.|+++++||||++++|+|+++|++++
T Consensus 207 ~~~g~~i~~~aa-~~~~~~~lElGG~~~~IV~~daDl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~~~f~~~l~~~~ 285 (455)
T cd07120 207 TATGRAIMAAAA-PTLKRLGLELGGKTPCIVFDDADLDAALPKLERALTIFAGQFCMAGSRVLVQRSIADEVRDRLAARL 285 (455)
T ss_pred HHHHHHHHHHHH-hcCCeEEEECCCCCeeEECCCCCHHHHHHHHHHHHHHhCCCCCCCCeEEEEcHHHHHHHHHHHHHHH
Confidence 999999999987 7889999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hccccCCCCCCCCCccccCCHHHHHHHHHHHHHhhhcCCeEeeCCcccCC---CCceeeeEEEEeCCCCCcccccccccc
Q 015031 240 KAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIGK---KGYYIEPTIFTNVTEDMLIAKNEIFGP 316 (414)
Q Consensus 240 ~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~~---~g~~~~Ptvl~~~~~~~~~~~~E~fgP 316 (414)
+++++|+|.++++++||++++.+++++++++++++++|+++++||..... +|+|++|||+.+++++|+++++|+|||
T Consensus 286 ~~l~~G~p~~~~~~~gpli~~~~~~~~~~~i~~a~~~ga~~~~~g~~~~~~~~~g~~~~Ptvl~~~~~d~~i~~~E~FgP 365 (455)
T cd07120 286 AAVKVGPGLDPASDMGPLIDRANVDRVDRMVERAIAAGAEVVLRGGPVTEGLAKGAFLRPTLLEVDDPDADIVQEEIFGP 365 (455)
T ss_pred HhcCcCCCCCCCCCcCCccCHHHHHHHHHHHHHHHHCCCEEEeCCccCcccCCCCceECCEEEecCCCCChhhhCcCcCc
Confidence 99999999999999999999999999999999999999999998764332 689999999999999999999999999
Q ss_pred eEEEeeeCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHHhccceeEEEECCcCCCCCCCCccCCCCCCCCCcchHHHHH
Q 015031 317 VMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSIRAGIIWINCYFAFDSDCPYGGYKMSGFGRDCGLESLH 396 (414)
Q Consensus 317 vl~v~~~~~~~eai~~~n~~~~gl~~sv~s~d~~~~~~~~~~l~~g~v~vN~~~~~~~~~pfgG~~~sG~g~~~g~~~~~ 396 (414)
|++|++|+|.||||+++|+++|||+++|||+|.+.++++++++++|.|+||++....+.+||||+|.||+|+++|+++++
T Consensus 366 vl~v~~~~~~deai~~~n~~~~gLs~~ift~d~~~a~~~~~~l~~G~v~iN~~~~~~~~~pfGG~k~SG~G~~~g~~~l~ 445 (455)
T cd07120 366 VLTLETFDDEAEAVALANDTDYGLAASVWTRDLARAMRVARAIRAGTVWINDWNKLFAEAEEGGYRQSGLGRLHGVAALE 445 (455)
T ss_pred eEEEeecCCHHHHHHHHhCCCCCceEEEEcCCHHHHHHHHHhcCcceEEECCCCCCCCCCCcCCccccccCccchHHHHH
Confidence 99999999999999999999999999999999999999999999999999998877778999999999999999999999
Q ss_pred hhhcccEEE
Q 015031 397 NYLQVKSVV 405 (414)
Q Consensus 397 ~~~~~k~i~ 405 (414)
+||++|+++
T Consensus 446 ~ft~~k~v~ 454 (455)
T cd07120 446 DFIEYKHIY 454 (455)
T ss_pred HHhceeEEe
Confidence 999999985
|
Included in this CD is the aldehyde dehydrogenase (PsfA, locus ACA09737) of Pseudomonas putida involved in furoic acid metabolism. Transcription of psfA was induced in response to 2-furoic acid, furfuryl alcohol, and furfural. |
| >TIGR01780 SSADH succinate-semialdehyde dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.5e-88 Score=682.19 Aligned_cols=400 Identities=41% Similarity=0.690 Sum_probs=376.7
Q ss_pred CHHHHHHHHHhHHHHHHHHHHHcCCChHHHhhccHHHHHHHHHHHHHhhhhhcCceeccc-cCccccccccCCcEEEEEc
Q 015031 1 MLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMS-RALQGYTLREPIGVVGHII 79 (414)
Q Consensus 1 L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~-~~~~~~~~~~P~Gvv~~i~ 79 (414)
|+++++.|++++++|++++++|+|||..++ ..|+..+++.+++++...++..+...+.. .+...+..++|+|||++|+
T Consensus 47 L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a-~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~I~ 125 (448)
T TIGR01780 47 LRKWYNLMMENKDDLARLITLENGKPLKEA-KGEILYAASFLEWFAEEAKRVYGDTIPSPQSDKRLLVIKQPVGVCAAIT 125 (448)
T ss_pred HHHHHHHHHHhHHHHHHHHHHHcCCCHHHH-HHHHHHHHHHHHHHHHHHHHhcCccccCCCCCceeEEEEeeeeEEEEEc
Confidence 578999999999999999999999999975 57999999999999987766655433322 3445567889999999999
Q ss_pred CCCcChHhhHHHHHHHHhcCCeEEEecCCCChhHHHHHHHHHHHcCCCCCeEEEEcCC-chhHHHHHHhCCCcCeEEEeC
Q 015031 80 PWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGF-GPTAGAAIASHMDIDKVSFTG 158 (414)
Q Consensus 80 p~n~P~~~~~~~~~~ALaaGN~vv~kps~~~~~~~~~l~~~~~~aglp~g~v~~~~~~-~~~~~~~l~~~~~~~~v~~tG 158 (414)
|||||+...++++++||++||+||+|||+.+|+++..+.+++.++|+|+|++|+++++ +.+.++.|+.||+++.|.|||
T Consensus 126 p~N~P~~~~~~~~~~ALaaGN~VvlKps~~~p~~~~~l~~~~~~aGlP~gvv~~v~g~~~~~~~~~l~~~~~i~~v~ftG 205 (448)
T TIGR01780 126 PWNFPAAMITRKAGAALAAGCTVVVKPAEQTPLSALALARLAEQAGIPKGVLNVITGSRAKEVGKVLCTSPLVRKISFTG 205 (448)
T ss_pred CCChHHHHHHHHHHHHHHcCCeEeeECCccchHHHHHHHHHHHHcCCCccceEEEeCCCchHHHHHHhcCCCCCEEEEEC
Confidence 9999999999999999999999999999999999999999999999999999999997 677889999999999999999
Q ss_pred CHHHHHHHHHHHhhCCCCceeeeCCCCCceeecCCCCHHHHHHHHHHHHhcccCCccccCcEEEEeCccHHHHHHHHHHH
Q 015031 159 STDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEK 238 (414)
Q Consensus 159 s~~~~~~i~~~~~~~~~~~~~~e~gG~~~~iV~~dadl~~a~~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f~~~l~~~ 238 (414)
|+.+|+.|.+.++ .+++|+++|+|||||+||++|||++.|++.+++++|.|+||.|+++++||||+++||+|+++|+++
T Consensus 206 s~~~g~~v~~~aa-~~~~~~~lElGGk~~~iV~~dadl~~aa~~iv~~~f~~sGQ~C~a~~rv~V~~~i~d~f~~~l~~~ 284 (448)
T TIGR01780 206 STNVGKILMKQSA-STVKKVSMELGGNAPFIVFDDADIDQAVEGAMASKFRNAGQTCVCANRLYVHDGIYDEFAKKLAEA 284 (448)
T ss_pred cHHHHHHHHHHHh-hcCCceEeecCCCCeeEECCCCCHHHHHHHHHHHHHHhcCCcccCCceeechHHHHHHHHHHHHHH
Confidence 9999999999987 788999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhccccCCCCCCCCCccccCCHHHHHHHHHHHHHhhhcCCeEeeCCcccCCCCceeeeEEEEeCCCCCcccccccccceE
Q 015031 239 AKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIGKKGYYIEPTIFTNVTEDMLIAKNEIFGPVM 318 (414)
Q Consensus 239 ~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl 318 (414)
++++++|+|.++++++||++++.+++++++++++++++|+++++||.....+|+|++|||+.+++++|++++||+||||+
T Consensus 285 ~~~l~~G~p~~~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~il~gg~~~~~~g~~~~Ptvl~~~~~~~~i~~eE~FGPvl 364 (448)
T TIGR01780 285 VKKLKVGNGLDEGVTQGPLINEKAVEKVEKHIADAVEKGAKVVTGGKRHELGGNFFEPTVLSNVTQDMLVAKEETFGPLA 364 (448)
T ss_pred HHhcCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCEEEeCCCcCCCCCeeEcCEEEecCCCCChHhhCCCCCceE
Confidence 99999999999999999999999999999999999999999999997654568999999999999999999999999999
Q ss_pred EEeeeCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHHhccceeEEEECCcCCCCCCCCccCCCCCCCCCcchHHHHHhh
Q 015031 319 ALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSIRAGIIWINCYFAFDSDCPYGGYKMSGFGRDCGLESLHNY 398 (414)
Q Consensus 319 ~v~~~~~~~eai~~~n~~~~gl~~sv~s~d~~~~~~~~~~l~~g~v~vN~~~~~~~~~pfgG~~~sG~g~~~g~~~~~~~ 398 (414)
+|++|+|.||||+++|+++|||++||||+|.+.++++++++++|.|+||+.....+.+||||+|.||+|+++|.+++++|
T Consensus 365 ~v~~~~~~~eai~~an~~~~gL~~~vfs~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~pfGG~k~SG~G~~~g~~~~~~~ 444 (448)
T TIGR01780 365 PVFKFDDEEEVIAIANDTEVGLAAYFFSRDLATIWRVAEALEYGMVGINTGLISNVVAPFGGVKQSGLGREGSKYGIEEY 444 (448)
T ss_pred EEEEECCHHHHHHHHhCCCcCceEEEECCCHHHHHHHHHhCCccEEEECCCCCCCCCCCCCCcccccCCccchHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999876667899999999999999999999999
Q ss_pred hccc
Q 015031 399 LQVK 402 (414)
Q Consensus 399 ~~~k 402 (414)
|+.|
T Consensus 445 ~~~k 448 (448)
T TIGR01780 445 LETK 448 (448)
T ss_pred hccC
Confidence 9875
|
SSADH enzyme belongs to the aldehyde dehydrogenase family (pfam00171), sharing a common evolutionary origin and enzymatic mechanism with lactaldehyde dehydrogenase. Like in lactaldehyde dehydrogenase and succinate semialdehyde dehydrogenase, the mammalian catalytic glutamic acid and cysteine residues are conserved in all the enzymes of this family (PS00687, PS00070). |
| >PLN02467 betaine aldehyde dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-87 Score=684.36 Aligned_cols=407 Identities=46% Similarity=0.792 Sum_probs=382.4
Q ss_pred CHHHHHHHHHhHHHHHHHHHHHcCCChHHHhhccHHHHHHHHHHHHHhhhhhcCcee---ccc-cCccccccccCCcEEE
Q 015031 1 MLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVL---KMS-RALQGYTLREPIGVVG 76 (414)
Q Consensus 1 L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~~~~~~~~~~---~~~-~~~~~~~~~~P~Gvv~ 76 (414)
|+++++.|++|+++|++++++|+|||..++. .|+..+++.+++++.+++++.+... ... .+...+++++|+|||+
T Consensus 78 L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a~-~ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~ 156 (503)
T PLN02467 78 LRAIAAKITERKSELAKLETLDCGKPLDEAA-WDMDDVAGCFEYYADLAEALDAKQKAPVSLPMETFKGYVLKEPLGVVG 156 (503)
T ss_pred HHHHHHHHHHhHHHHHHHHHHHcCCCHHHHH-HHHHHHHHHHHHHHHHHHHhcCccccccCCCCCCceeEEEEecCceEE
Confidence 5789999999999999999999999999764 6999999999999998877654421 111 1334678999999999
Q ss_pred EEcCCCcChHhhHHHHHHHHhcCCeEEEecCCCChhHHHHHHHHHHHcCCCCCeEEEEcCCchhHHHHHHhCCCcCeEEE
Q 015031 77 HIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSF 156 (414)
Q Consensus 77 ~i~p~n~P~~~~~~~~~~ALaaGN~vv~kps~~~~~~~~~l~~~~~~aglp~g~v~~~~~~~~~~~~~l~~~~~~~~v~~ 156 (414)
+|+|||||+...++++++||++||+||+|||+.+|.++..+.+++.++|+|+|++|++++++.+.++.|+.|+++|.|.|
T Consensus 157 ~I~PwN~P~~~~~~~i~~ALaaGN~Vv~Kps~~tp~~~~~l~~~~~eag~P~gvv~~v~g~~~~~~~~L~~~~~v~~v~f 236 (503)
T PLN02467 157 LITPWNYPLLMATWKVAPALAAGCTAVLKPSELASVTCLELADICREVGLPPGVLNVVTGLGTEAGAPLASHPGVDKIAF 236 (503)
T ss_pred EECCCChHHHHHHHHHHHHHHcCCEEEEECCCcCcHHHHHHHHHHHHcCcCcCeEEEEeCCchhHHHHHhcCCCCCEEEE
Confidence 99999999999999999999999999999999999999999999999999999999999977788999999999999999
Q ss_pred eCCHHHHHHHHHHHhhCCCCceeeeCCCCCceeecCCCCHHHHHHHHHHHHhcccCCccccCcEEEEeCccHHHHHHHHH
Q 015031 157 TGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLV 236 (414)
Q Consensus 157 tGs~~~~~~i~~~~~~~~~~~~~~e~gG~~~~iV~~dadl~~a~~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f~~~l~ 236 (414)
|||+.+|+.|.+.++ .+++|+++|+|||||+||++|||++.|++.+++++|.|+||.|+++++||||++++|+|+++|+
T Consensus 237 TGs~~~g~~v~~~aa-~~~~~~~lElGG~~~~iV~~dADl~~A~~~i~~~~f~~~GQ~C~a~~rv~V~~~i~d~f~~~l~ 315 (503)
T PLN02467 237 TGSTATGRKIMTAAA-QMVKPVSLELGGKSPIIVFDDVDLDKAVEWAMFGCFWTNGQICSATSRLLVHERIASEFLEKLV 315 (503)
T ss_pred ECCHHHHHHHHHHHh-ccCCcEEEECCCCCceEECCCCCHHHHHHHHHHHHHhhcCCCCCCCcEEEEcHHHHHHHHHHHH
Confidence 999999999999987 8899999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhccccCCCCCCCCCccccCCHHHHHHHHHHHHHhhhcCCeEeeCCcccC--CCCceeeeEEEEeCCCCCcccccccc
Q 015031 237 EKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIG--KKGYYIEPTIFTNVTEDMLIAKNEIF 314 (414)
Q Consensus 237 ~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~--~~g~~~~Ptvl~~~~~~~~~~~~E~f 314 (414)
++++++++|+|.++++++||++++.+++++.+++++++.+|+++++||.... ..|+|++|||+.+++++|++++||+|
T Consensus 316 ~~~~~l~~g~p~~~~~~~Gpli~~~~~~~v~~~v~~a~~~Ga~vl~gG~~~~~~~~g~~~~Ptvl~~v~~~~~i~~eE~F 395 (503)
T PLN02467 316 KWAKNIKISDPLEEGCRLGPVVSEGQYEKVLKFISTAKSEGATILCGGKRPEHLKKGFFIEPTIITDVTTSMQIWREEVF 395 (503)
T ss_pred HHHHhcCCCCCCCCCCCcCCCCCHHHHHHHHHHHHHHHHCCCEEEeCCCCCCCCCCCeEEeeEEEeCCCCCChHhhCCCC
Confidence 9999999999999999999999999999999999999999999999997642 36899999999999999999999999
Q ss_pred cceEEEeeeCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHHhccceeEEEECCcCCCCCCCCccCCCCCCCCCcchHHH
Q 015031 315 GPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSIRAGIIWINCYFAFDSDCPYGGYKMSGFGRDCGLES 394 (414)
Q Consensus 315 gPvl~v~~~~~~~eai~~~n~~~~gl~~sv~s~d~~~~~~~~~~l~~g~v~vN~~~~~~~~~pfgG~~~sG~g~~~g~~~ 394 (414)
|||++|++|+|.||||+++|+++|||+++|||+|.+.++++++++++|.|+||+.......+||||+|.||+|+++|.+|
T Consensus 396 gPvl~v~~~~~~~eAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~~G~v~iN~~~~~~~~~PfGG~k~SG~G~~~G~~~ 475 (503)
T PLN02467 396 GPVLCVKTFSTEDEAIELANDSHYGLAGAVISNDLERCERVSEAFQAGIVWINCSQPCFCQAPWGGIKRSGFGRELGEWG 475 (503)
T ss_pred CceEEEEeeCCHHHHHHHHhCCCCCceEEEECCCHHHHHHHHHhCCcceEEECCCCCCCCCCCcCCcccCcCCCcchHHH
Confidence 99999999999999999999999999999999999999999999999999999977666789999999999999999999
Q ss_pred HHhhhcccEEEEeCC
Q 015031 395 LHNYLQVKSVVTPIF 409 (414)
Q Consensus 395 ~~~~~~~k~i~~~~~ 409 (414)
+++||+.|+++....
T Consensus 476 l~~ft~~k~i~~~~~ 490 (503)
T PLN02467 476 LENYLSVKQVTKYIS 490 (503)
T ss_pred HHHhhCeEEEEEecC
Confidence 999999999988654
|
|
| >cd07115 ALDH_HMSADH_HapE Pseudomonas fluorescens 4-hydroxymuconic semialdehyde dehydrogenase-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-87 Score=679.74 Aligned_cols=406 Identities=53% Similarity=0.902 Sum_probs=384.6
Q ss_pred CHHHHHHHHHhHHHHHHHHHHHcCCChHHHhhccHHHHHHHHHHHHHhhhhhcCceeccccCccccccccCCcEEEEEcC
Q 015031 1 MLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMSRALQGYTLREPIGVVGHIIP 80 (414)
Q Consensus 1 L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p 80 (414)
|+++++.|++|+++|++++++|+|||..++...|+..+++.+++++.++++..+...+...+...+.+++|+|||++|+|
T Consensus 47 l~~~a~~l~~~~~~la~~~~~e~Gk~~~~~~~~ev~~~i~~l~~~~~~~~~~~g~~~~~~~~~~~~~~~~P~Gvv~~i~p 126 (453)
T cd07115 47 LWRLAELILANADELARLESLDTGKPIRAARRLDVPRAADTFRYYAGWADKIEGEVIPVRGPFLNYTVREPVGVVGAIVP 126 (453)
T ss_pred HHHHHHHHHHhHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCceecCCCCceEEEEecceeEEEEEcC
Confidence 57899999999999999999999999998655699999999999999887766554443345567899999999999999
Q ss_pred CCcChHhhHHHHHHHHhcCCeEEEecCCCChhHHHHHHHHHHHcCCCCCeEEEEcCCchhHHHHHHhCCCcCeEEEeCCH
Q 015031 81 WNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGST 160 (414)
Q Consensus 81 ~n~P~~~~~~~~~~ALaaGN~vv~kps~~~~~~~~~l~~~~~~aglp~g~v~~~~~~~~~~~~~l~~~~~~~~v~~tGs~ 160 (414)
||||+...++++++||++||+||+|||+.+|.++..+.+++.++|+|+++++++++++.+.++.|+.|+++|.|.||||+
T Consensus 127 ~N~P~~~~~~~~~~ALaaGN~Vi~Kps~~~p~~~~~l~~~~~~aGlP~~~~~~v~g~~~~~~~~l~~~~~id~v~fTGs~ 206 (453)
T cd07115 127 WNFPLMFAAWKVAPALAAGNTVVLKPAELTPLSALRIAELMAEAGFPAGVLNVVTGFGEVAGAALVEHPDVDKITFTGST 206 (453)
T ss_pred CCCHHHHHHHHHHHHHhcCCEEEEECCCCCcHHHHHHHHHHHhcCcCchheEEEecCchhHHHHHhcCCCCCEEEEECcH
Confidence 99999999999999999999999999999999999999999999999999999999777888999999999999999999
Q ss_pred HHHHHHHHHHhhCCCCceeeeCCCCCceeecCCCCHHHHHHHHHHHHhcccCCccccCcEEEEeCccHHHHHHHHHHHHh
Q 015031 161 DVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAK 240 (414)
Q Consensus 161 ~~~~~i~~~~~~~~~~~~~~e~gG~~~~iV~~dadl~~a~~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f~~~l~~~~~ 240 (414)
.+|+.|.+.++ .+++|+++|+||+||+||++|||++.|++.+++++|.|+||.|+++++||||++++|+|+++|+++++
T Consensus 207 ~~g~~v~~~aa-~~~~~~~lElgG~~p~iV~~dAdl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~l~~~~~ 285 (453)
T cd07115 207 AVGRKIMQGAA-GNLKRVSLELGGKSANIVFADADLDAAVRAAATGIFYNQGQMCTAGSRLLVHESIYDEFLERFTSLAR 285 (453)
T ss_pred HHHHHHHHHHh-hcCCeEEEecCCCCceEECCCCCHHHHHHHHHHHHHhccCCCCCCCeEEEEcHHHHHHHHHHHHHHHh
Confidence 99999999887 78899999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccCCCCCCCCCccccCCHHHHHHHHHHHHHhhhcCCeEeeCCcccCCCCceeeeEEEEeCCCCCcccccccccceEEE
Q 015031 241 AWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIGKKGYYIEPTIFTNVTEDMLIAKNEIFGPVMAL 320 (414)
Q Consensus 241 ~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v 320 (414)
++++|+|.++++++||++++.+++++++++++++++|+++++||......|+|++|||+.+++++|++++||+||||++|
T Consensus 286 ~~~~g~p~~~~~~~gpli~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v 365 (453)
T cd07115 286 SLRPGDPLDPKTQMGPLVSQAQFDRVLDYVDVGREEGARLLTGGKRPGARGFFVEPTIFAAVPPEMRIAQEEIFGPVVSV 365 (453)
T ss_pred cCCcCCCCCCCCCCCCCcCHHHHHHHHHHHHHHHHCCCEEEeCCCCCCCCCceECCEEEecCCCCChHhhCCCcCceEEE
Confidence 99999999999999999999999999999999999999999999765446899999999999999999999999999999
Q ss_pred eeeCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHHhccceeEEEECCcCCCCCCCCccCCCCCCCCCcchHHHHHhhhc
Q 015031 321 MKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSIRAGIIWINCYFAFDSDCPYGGYKMSGFGRDCGLESLHNYLQ 400 (414)
Q Consensus 321 ~~~~~~~eai~~~n~~~~gl~~sv~s~d~~~~~~~~~~l~~g~v~vN~~~~~~~~~pfgG~~~sG~g~~~g~~~~~~~~~ 400 (414)
++|+|.||||+++|++++||++||||+|.+.++++++++++|+|+||+++...+.+||||+|.||+|+++|.+|+++|++
T Consensus 366 ~~~~~~~eai~~~n~~~~gL~~~ifs~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~pfGG~~~SG~G~~~g~~~~~~f~~ 445 (453)
T cd07115 366 MRFRDEEEALRIANGTEYGLAAGVWTRDLGRAHRVAAALKAGTVWINTYNRFDPGSPFGGYKQSGFGREMGREALDEYTE 445 (453)
T ss_pred EeeCCHHHHHHHHhCCCCCCeEEEECCCHHHHHHHHHhcCccEEEECCCCCCCCCCCCCCcccccCCcCchHHHHHHhhc
Confidence 99999999999999999999999999999999999999999999999987777889999999999999999999999999
Q ss_pred ccEEEEe
Q 015031 401 VKSVVTP 407 (414)
Q Consensus 401 ~k~i~~~ 407 (414)
.|+++++
T Consensus 446 ~k~~~~~ 452 (453)
T cd07115 446 VKSVWVN 452 (453)
T ss_pred eEEEEEe
Confidence 9999764
|
4-hydroxymuconic semialdehyde dehydrogenase (HapE, EC=1.2.1.61) of Pseudomonas fluorescens ACB involved in 4-hydroxyacetophenone degradation, and putative hydroxycaproate semialdehyde dehydrogenase (ChnE) of Brachymonas petroleovorans involved in cyclohexane metabolism, and other similar sequences, are present in this CD. |
| >cd07091 ALDH_F1-2_Ald2-like ALDH subfamily: ALDH families 1and 2, including 10-formyltetrahydrofolate dehydrogenase, NAD+-dependent retinal dehydrogenase 1 and related proteins | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-87 Score=683.71 Aligned_cols=406 Identities=60% Similarity=0.993 Sum_probs=383.4
Q ss_pred CHHHHHHHHHhHHHHHHHHHHHcCCChHHHhhccHHHHHHHHHHHHHhhhhhcCceeccccCccccccccCCcEEEEEcC
Q 015031 1 MLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMSRALQGYTLREPIGVVGHIIP 80 (414)
Q Consensus 1 L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p 80 (414)
|+++++.|++++++|++++++|+|||..++...|+..+++.+++++.++++..+...+...+...+.+++|+|||++|+|
T Consensus 71 L~~~a~~l~~~~~~la~~~~~e~Gk~~~~~~~~ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p 150 (476)
T cd07091 71 LNKLADLIERDRDELAALESLDNGKPLEESAKGDVALSIKCLRYYAGWADKIQGKTIPIDGNFLAYTRREPIGVCGQIIP 150 (476)
T ss_pred HHHHHHHHHHhHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCccccCCCCceEEEEEeceeEEEEECC
Confidence 57899999999999999999999999876666799999999999998877665554433345567889999999999999
Q ss_pred CCcChHhhHHHHHHHHhcCCeEEEecCCCChhHHHHHHHHHHHcCCCCCeEEEEcCCchhHHHHHHhCCCcCeEEEeCCH
Q 015031 81 WNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGST 160 (414)
Q Consensus 81 ~n~P~~~~~~~~~~ALaaGN~vv~kps~~~~~~~~~l~~~~~~aglp~g~v~~~~~~~~~~~~~l~~~~~~~~v~~tGs~ 160 (414)
||||+...++++++||++||+||+|||+.+|.++..+.+++.++|+|+|+++++++++.+.++.|..|+++|.|.||||+
T Consensus 151 ~N~P~~~~~~~~~~AL~aGN~VvlKps~~~p~~~~~l~~~~~~aglP~g~~~~v~g~~~~~~~~L~~~~~vd~V~fTGs~ 230 (476)
T cd07091 151 WNFPLLMLAWKLAPALAAGNTVVLKPAEQTPLSALYLAELIKEAGFPPGVVNIVPGFGPTAGAAISSHMDVDKIAFTGST 230 (476)
T ss_pred CcCHHHHHHHHHHHHHHcCCEEEEeCCCCChHHHHHHHHHHHHcCcCCCcEEEEeCCChhHHHHHhcCCCcCEEEEECcH
Confidence 99999999999999999999999999999999999999999999999999999999777889999999999999999999
Q ss_pred HHHHHHHHHHhhCCCCceeeeCCCCCceeecCCCCHHHHHHHHHHHHhcccCCccccCcEEEEeCccHHHHHHHHHHHHh
Q 015031 161 DVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAK 240 (414)
Q Consensus 161 ~~~~~i~~~~~~~~~~~~~~e~gG~~~~iV~~dadl~~a~~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f~~~l~~~~~ 240 (414)
.+|+.|.+.++..+++|+++|+|||||+||++|||++.|++.+++++|.|+||.|+++++||||++++|+|+++|+++++
T Consensus 231 ~~g~~v~~~aa~~~~~~~~lElgG~~~~iV~~dADl~~Aa~~i~~~~~~~~GQ~C~a~~rv~V~~~v~~~f~~~L~~~~~ 310 (476)
T cd07091 231 AVGRTIMEAAAKSNLKKVTLELGGKSPNIVFDDADLDKAVEWAAFGIFFNQGQCCCAGSRIFVQESIYDEFVEKFKARAE 310 (476)
T ss_pred HHHHHHHHHHHhcCCceEEEecCCCCeEEECCCCCHHHHHHHHHHHHHhccCCCCcCCcEEEEeHHHHHHHHHHHHHHHh
Confidence 99999999887338899999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccCCCCCCCCCccccCCHHHHHHHHHHHHHhhhcCCeEeeCCcccCCCCceeeeEEEEeCCCCCcccccccccceEEE
Q 015031 241 AWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIGKKGYYIEPTIFTNVTEDMLIAKNEIFGPVMAL 320 (414)
Q Consensus 241 ~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v 320 (414)
++++|+|.++++++||++++.+++++.+++++++++|+++++||....+.|+|++|||+.+++++|++++||+||||++|
T Consensus 311 ~~~~g~p~~~~~~~gpli~~~~~~~v~~~i~~a~~~ga~vl~gg~~~~~~~~~~~Ptvl~~v~~~~~~~~eE~FgPvl~v 390 (476)
T cd07091 311 KRVVGDPFDPDTFQGPQVSKAQFDKILSYIESGKKEGATLLTGGERHGSKGYFIQPTVFTDVKDDMKIAKEEIFGPVVTI 390 (476)
T ss_pred hCCCCCCCCCCCcCCCCcCHHHHHHHHHHHHHHHHCCCEEEeCCCCCCCCCceECcEEecCCCCCChhhhCCCCCCeEEE
Confidence 99999999999999999999999999999999999999999999876557899999999999999999999999999999
Q ss_pred eeeCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHHhccceeEEEECCcCCCCCCCCccCCCCCCCCCcchHHHHHhhhc
Q 015031 321 MKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSIRAGIIWINCYFAFDSDCPYGGYKMSGFGRDCGLESLHNYLQ 400 (414)
Q Consensus 321 ~~~~~~~eai~~~n~~~~gl~~sv~s~d~~~~~~~~~~l~~g~v~vN~~~~~~~~~pfgG~~~sG~g~~~g~~~~~~~~~ 400 (414)
++|+|++||++++|++++||++||||+|.+.++++++++++|+|+||+.+...+.+||||+|.||+|+++|.+|+++||+
T Consensus 391 ~~~~~~~eai~~~n~~~~gLsa~v~t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~pfgG~k~SG~G~~~g~~~~~~f~~ 470 (476)
T cd07091 391 LKFKTEDEVIERANDTEYGLAAGVFTKDINKALRVSRALKAGTVWVNTYNVFDAAVPFGGFKQSGFGRELGEEGLEEYTQ 470 (476)
T ss_pred eecCCHHHHHHHHhCCCCCceEEEECCCHHHHHHHHHhcCcceEEECCCCCCCCCCCcCCcccCcCCccchHHHHHHhhc
Confidence 99999999999999999999999999999999999999999999999987777889999999999999999999999999
Q ss_pred ccEEEE
Q 015031 401 VKSVVT 406 (414)
Q Consensus 401 ~k~i~~ 406 (414)
+|++++
T Consensus 471 ~k~~~~ 476 (476)
T cd07091 471 VKAVTI 476 (476)
T ss_pred eeEEeC
Confidence 999853
|
ALDH subfamily which includes the NAD+-dependent retinal dehydrogenase 1 (RALDH 1, ALDH1, EC=1.2.1.36), also known as aldehyde dehydrogenase family 1 member A1 (ALDH1A1), in humans, a homotetrameric, cytosolic enzyme that catalyzes the oxidation of retinaldehyde to retinoic acid. Human ALDH1B1 and ALDH2 are also in this cluster; both are mitochrondrial homotetramers which play important roles in acetaldehyde oxidation; ALDH1B1 in response to UV light exposure and ALDH2 during ethanol metabolism. 10-formyltetrahydrofolate dehydrogenase (FTHFDH, EC=1.5.1.6), also known as aldehyde dehydrogenase family 1 member L1 (ALDH1L1), in humans, a multi-domain homotetramer with an N-terminal formyl transferase domain and a C-terminal ALDH domain. FTHFDH catalyzes an NADP+-dependent dehydrogenase reaction resulting in the co |
| >cd07119 ALDH_BADH-GbsA Bacillus subtilis NAD+-dependent betaine aldehyde dehydrogenase-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.6e-87 Score=682.94 Aligned_cols=407 Identities=47% Similarity=0.777 Sum_probs=383.5
Q ss_pred CHHHHHHHHHhHHHHHHHHHHHcCCChHHHhhccHHHHHHHHHHHHHhhhhhcCceeccccCccccccccCCcEEEEEcC
Q 015031 1 MLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMSRALQGYTLREPIGVVGHIIP 80 (414)
Q Consensus 1 L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p 80 (414)
|+++++.|++++++|++++++|+|||..++ ..|+..+++.+++++.+.++..+...+...+...+.+++|+|||++|+|
T Consensus 65 L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a-~~ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GvV~~I~p 143 (482)
T cd07119 65 LFRIADKIREDAEELARLETLNTGKTLRES-EIDIDDVANCFRYYAGLATKETGEVYDVPPHVISRTVREPVGVCGLITP 143 (482)
T ss_pred HHHHHHHHHHhHHHHHHHHHHHcCCCHHHH-HHHHHHHHHHHHHHHHHHHHhcCccccCCCCceEEEEEeeeeeEEEEcC
Confidence 578999999999999999999999999976 4699999999999998887655543333344567899999999999999
Q ss_pred CCcChHhhHHHHHHHHhcCCeEEEecCCCChhHHHHHHHHHHHcCCCCCeEEEEcCCchhHHHHHHhCCCcCeEEEeCCH
Q 015031 81 WNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGST 160 (414)
Q Consensus 81 ~n~P~~~~~~~~~~ALaaGN~vv~kps~~~~~~~~~l~~~~~~aglp~g~v~~~~~~~~~~~~~l~~~~~~~~v~~tGs~ 160 (414)
||||+...++++++||++||+||+|||+.+|.++..+.+++.++|+|+|++|++++++.+.++.|+.||.+|.|.||||+
T Consensus 144 ~N~P~~~~~~~~~~ALaaGN~VilKps~~~p~~~~~l~~~~~~aGlP~gv~~~v~g~~~~~~~~l~~~~~v~~V~fTGs~ 223 (482)
T cd07119 144 WNYPLLQAAWKLAPALAAGNTVVIKPSEVTPLTTIALFELIEEAGLPAGVVNLVTGSGATVGAELAESPDVDLVSFTGGT 223 (482)
T ss_pred CchHHHHHHHHHHHHHhcCCEEEEECCccccHHHHHHHHHHHHcCCCcCcEEEEecCcHHHHHHHhcCCCCCEEEEECcH
Confidence 99999999999999999999999999999999999999999999999999999999777789999999999999999999
Q ss_pred HHHHHHHHHHhhCCCCceeeeCCCCCceeecCCCCHHHHHHHHHHHHhcccCCccccCcEEEEeCccHHHHHHHHHHHHh
Q 015031 161 DVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAK 240 (414)
Q Consensus 161 ~~~~~i~~~~~~~~~~~~~~e~gG~~~~iV~~dadl~~a~~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f~~~l~~~~~ 240 (414)
.+|+.|.+.++ .+++|+++|+||+||+||++|||++.|++.+++++|.|+||.|+++++||||++++|+|+++|+++++
T Consensus 224 ~~g~~i~~~aa-~~~~~~~lElGGkn~~iV~~dADl~~Aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~ 302 (482)
T cd07119 224 ATGRSIMRAAA-GNVKKVALELGGKNPNIVFADADFETAVDQALNGVFFNAGQVCSAGSRLLVEESIHDKFVAALAERAK 302 (482)
T ss_pred HHHHHHHHHHH-hcCCcEEEECCCCCceEECCCCCHHHHHHHHHHHHHhcCCCCCCCCeEEEEcHHHHHHHHHHHHHHHH
Confidence 99999999987 78899999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccCCCCCCCCCccccCCHHHHHHHHHHHHHhhhcCCeEeeCCcccC----CCCceeeeEEEEeCCCCCcccccccccc
Q 015031 241 AWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIG----KKGYYIEPTIFTNVTEDMLIAKNEIFGP 316 (414)
Q Consensus 241 ~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~----~~g~~~~Ptvl~~~~~~~~~~~~E~fgP 316 (414)
++++|+|.++++++||++++.+++++++++++++++|+++++||.... ..|+|++|||+.+++++|++++||+|||
T Consensus 303 ~~~~G~~~~~~~~~gpli~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~~~~~g~~~~Ptvl~~~~~~~~i~~eE~FgP 382 (482)
T cd07119 303 KIKLGNGLDADTEMGPLVSAEHREKVLSYIQLGKEEGARLVCGGKRPTGDELAKGYFVEPTIFDDVDRTMRIVQEEIFGP 382 (482)
T ss_pred hcCCCCCCCCCCcCCCCCCHHHHHHHHHHHHHHHHCCCEEEeCCcccccccCCCCceECCEEEecCCCCChHhhCCCCCc
Confidence 999999999999999999999999999999999999999999997542 2589999999999999999999999999
Q ss_pred eEEEeeeCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHHhccceeEEEECCcCCCCCCCCccCCCCCCCCCcchHHHHH
Q 015031 317 VMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSIRAGIIWINCYFAFDSDCPYGGYKMSGFGRDCGLESLH 396 (414)
Q Consensus 317 vl~v~~~~~~~eai~~~n~~~~gl~~sv~s~d~~~~~~~~~~l~~g~v~vN~~~~~~~~~pfgG~~~sG~g~~~g~~~~~ 396 (414)
|++|++|+|+||||+++|+++|||++||||+|.+.++++++++++|+|+||+.....+.+||||+|.||+|+++|++|++
T Consensus 383 vl~v~~~~~~deai~~~n~~~~gL~~~v~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~PfGG~k~SG~G~~~G~~~l~ 462 (482)
T cd07119 383 VLTVERFDTEEEAIRLANDTPYGLAGAVWTKDIARANRVARRLRAGTVWINDYHPYFAEAPWGGYKQSGIGRELGPTGLE 462 (482)
T ss_pred eEEEeccCCHHHHHHHHhCCCCCceEEEECCCHHHHHHHHHhcCcceEEECCCCCCCCCCCcCCcccCcCCccchHHHHH
Confidence 99999999999999999999999999999999999999999999999999997766778999999999999999999999
Q ss_pred hhhcccEEEEeCC
Q 015031 397 NYLQVKSVVTPIF 409 (414)
Q Consensus 397 ~~~~~k~i~~~~~ 409 (414)
+||+.|+++.++.
T Consensus 463 ~~t~~k~v~~~~~ 475 (482)
T cd07119 463 EYQETKHININLS 475 (482)
T ss_pred HHhceEEEEEecC
Confidence 9999999988764
|
Included in this CD is the NAD+-dependent, betaine aldehyde dehydrogenase (BADH, GbsA, EC=1.2.1.8) of Bacillus subtilis involved in the synthesis of the osmoprotectant glycine betaine from choline or glycine betaine aldehyde. |
| >cd07100 ALDH_SSADH1_GabD1 Mycobacterium tuberculosis succinate-semialdehyde dehydrogenase 1-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-87 Score=674.10 Aligned_cols=401 Identities=38% Similarity=0.593 Sum_probs=378.0
Q ss_pred CHHHHHHHHHhHHHHHHHHHHHcCCChHHHhhccHHHHHHHHHHHHHhhhhhcCc-eeccccCccccccccCCcEEEEEc
Q 015031 1 MLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGE-VLKMSRALQGYTLREPIGVVGHII 79 (414)
Q Consensus 1 L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~~~~~~~~-~~~~~~~~~~~~~~~P~Gvv~~i~ 79 (414)
|+++++.|++++++|++++++|+|||..++ ..|+..+++.+++++..+++.... ..+. .+...+++++|+|||++|+
T Consensus 27 L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a-~~ev~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~P~GvV~~I~ 104 (429)
T cd07100 27 LRKLADLLRERKDELARLITLEMGKPIAEA-RAEVEKCAWICRYYAENAEAFLADEPIET-DAGKAYVRYEPLGVVLGIM 104 (429)
T ss_pred HHHHHHHHHhHHHHHHHHHHHHcCCCHHHH-HHHHHHHHHHHHHHHHHHHHhcCCeeccC-CCceEEEEEEeeeEEEEEc
Confidence 578999999999999999999999999976 579999999999999888766432 2322 2445678999999999999
Q ss_pred CCCcChHhhHHHHHHHHhcCCeEEEecCCCChhHHHHHHHHHHHcCCCCCeEEEEcCCchhHHHHHHhCCCcCeEEEeCC
Q 015031 80 PWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGS 159 (414)
Q Consensus 80 p~n~P~~~~~~~~~~ALaaGN~vv~kps~~~~~~~~~l~~~~~~aglp~g~v~~~~~~~~~~~~~l~~~~~~~~v~~tGs 159 (414)
|||||+...++++++||++||+||+|||+.+|.++..+.+++.++|+|+|++|++++++ +.+..|+.|++++.|.||||
T Consensus 105 P~N~Pl~~~~~~~~~ALaaGN~VV~Kps~~~p~~~~~l~~~l~~aglP~gvv~~v~g~~-~~~~~l~~~~~i~~v~fTGs 183 (429)
T cd07100 105 PWNFPFWQVFRFAAPNLMAGNTVLLKHASNVPGCALAIEELFREAGFPEGVFQNLLIDS-DQVEAIIADPRVRGVTLTGS 183 (429)
T ss_pred CCchHHHHHHHHHHHHHHcCCEEEEECCCcchHHHHHHHHHHHHcCCCcCcEEEEeCCc-hhHHHHhcCCCCCEEEEECc
Confidence 99999999999999999999999999999999999999999999999999999999855 56789999999999999999
Q ss_pred HHHHHHHHHHHhhCCCCceeeeCCCCCceeecCCCCHHHHHHHHHHHHhcccCCccccCcEEEEeCccHHHHHHHHHHHH
Q 015031 160 TDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKA 239 (414)
Q Consensus 160 ~~~~~~i~~~~~~~~~~~~~~e~gG~~~~iV~~dadl~~a~~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f~~~l~~~~ 239 (414)
+++|+.|.+.++ ++++|+++|+|||||+||++|||++.|++.+++++|.|+||.|+++++||||++++|+|+++|++++
T Consensus 184 ~~~g~~i~~~aa-~~~~~~~lelgG~~p~iV~~daDl~~aa~~i~~~~~~~~GQ~C~a~~rv~v~~~i~~~f~~~l~~~~ 262 (429)
T cd07100 184 ERAGRAVAAEAG-KNLKKSVLELGGSDPFIVLDDADLDKAVKTAVKGRLQNAGQSCIAAKRFIVHEDVYDEFLEKFVEAM 262 (429)
T ss_pred HHHHHHHHHHHh-hcCcceEEecCCCCeeEECCCCCHHHHHHHHHHHHHhccCCCCCCCeEEEEcHHHHHHHHHHHHHHH
Confidence 999999999987 8899999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hccccCCCCCCCCCccccCCHHHHHHHHHHHHHhhhcCCeEeeCCcccCCCCceeeeEEEEeCCCCCcccccccccceEE
Q 015031 240 KAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIGKKGYYIEPTIFTNVTEDMLIAKNEIFGPVMA 319 (414)
Q Consensus 240 ~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~ 319 (414)
+++++|+|+++++++||++++.+++++++++++++++|+++++||......|+|++|||+.+++++|++++||+||||++
T Consensus 263 ~~~~~g~p~~~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~~~~gg~~~~~~g~~~~Ptv~~~~~~~~~~~~eE~fgPvl~ 342 (429)
T cd07100 263 AALKVGDPMDEDTDLGPLARKDLRDELHEQVEEAVAAGATLLLGGKRPDGPGAFYPPTVLTDVTPGMPAYDEELFGPVAA 342 (429)
T ss_pred HhccCCCCccCCCCccCCCCHHHHHHHHHHHHHHHHCCCEEEeCCCcCCCCCeEEcCEEeecCCCCCHHHhCCCCCCeEE
Confidence 99999999999999999999999999999999999999999999976544689999999999999999999999999999
Q ss_pred EeeeCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHHhccceeEEEECCcCCCCCCCCccCCCCCCCCCcchHHHHHhhh
Q 015031 320 LMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSIRAGIIWINCYFAFDSDCPYGGYKMSGFGRDCGLESLHNYL 399 (414)
Q Consensus 320 v~~~~~~~eai~~~n~~~~gl~~sv~s~d~~~~~~~~~~l~~g~v~vN~~~~~~~~~pfgG~~~sG~g~~~g~~~~~~~~ 399 (414)
|++|+|.||||+++|+++|||++||||+|.+.++++++++++|.|+||++....+.+||||+|.||+|+++|++++++||
T Consensus 343 v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~pfGG~~~SG~G~~~g~~~l~~~~ 422 (429)
T cd07100 343 VIKVKDEEEAIALANDSPFGLGGSVFTTDLERAERVARRLEAGMVFINGMVKSDPRLPFGGVKRSGYGRELGRFGIREFV 422 (429)
T ss_pred EeeeCCHHHHHHHHhCCCcCceEEEECCCHHHHHHHHHhCCcCeEEECCCCCCCCCCCcCCccccccCCcchHHHHHHhc
Confidence 99999999999999999999999999999999999999999999999998877778999999999999999999999999
Q ss_pred cccEEE
Q 015031 400 QVKSVV 405 (414)
Q Consensus 400 ~~k~i~ 405 (414)
+.|+++
T Consensus 423 ~~k~v~ 428 (429)
T cd07100 423 NIKTVW 428 (429)
T ss_pred ceeEEe
Confidence 999875
|
Succinate-semialdehyde dehydrogenase 1 (SSADH1, GabD1, EC=1.2.1.16) catalyzes the NADP(+)-dependent oxidation of succinate semialdehyde (SSA) to succinate. SSADH activity in Mycobacterium tuberculosis (Mtb) is encoded by both gabD1 (Rv0234c) and gabD2 (Rv1731). The Mtb GabD1 SSADH1 reportedly is an enzyme of the gamma-aminobutyrate shunt, which forms a functional link between two TCA half-cycles by converting alpha-ketoglutarate to succinate. |
| >PLN02315 aldehyde dehydrogenase family 7 member | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.5e-87 Score=681.87 Aligned_cols=404 Identities=28% Similarity=0.483 Sum_probs=375.7
Q ss_pred CHHHHHHHHHhHHHHHHHHHHHcCCChHHHhhccHHHHHHHHHHHHHhhhhhcCceeccc-cCccccccccCCcEEEEEc
Q 015031 1 MLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMS-RALQGYTLREPIGVVGHII 79 (414)
Q Consensus 1 L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~-~~~~~~~~~~P~Gvv~~i~ 79 (414)
|+++++.|++|+++|++++++|+|||..++ ..|+..+++.+++++..++++.+...+.. .+...+..++|+|||++|+
T Consensus 84 L~~~a~~l~~~~~~la~~~~~e~GK~~~~a-~~ev~~~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~P~GVV~~I~ 162 (508)
T PLN02315 84 VRQIGDALRAKLDYLGRLVSLEMGKILAEG-IGEVQEIIDMCDFAVGLSRQLNGSIIPSERPNHMMMEVWNPLGIVGVIT 162 (508)
T ss_pred HHHHHHHHHhHHHHHHHHHHHHcCCCHHHH-HHHHHHHHHHHHHHHHHHHHhcCccccCCCCCceeEEEEecceEEEEEC
Confidence 578999999999999999999999999976 57999999999999988776655433321 2334567899999999999
Q ss_pred CCCcChHhhHHHHHHHHhcCCeEEEecCCCChhHHHH----HHHHHHHcCCCCCeEEEEcCCchhHHHHHHhCCCcCeEE
Q 015031 80 PWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALY----FAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVS 155 (414)
Q Consensus 80 p~n~P~~~~~~~~~~ALaaGN~vv~kps~~~~~~~~~----l~~~~~~aglp~g~v~~~~~~~~~~~~~l~~~~~~~~v~ 155 (414)
|||||+...++++++||++||+||+|||+.+|.++.. +.+++.++|+|+|++|++++ +.+.++.|..||++|.|.
T Consensus 163 PwN~P~~~~~~~~~~ALaaGN~VVlKPs~~tp~~~~~~~~l~~~~~~~aGlP~gvv~~v~g-~~~~~~~l~~~~~v~~v~ 241 (508)
T PLN02315 163 AFNFPCAVLGWNACIALVCGNCVVWKGAPTTPLITIAMTKLVAEVLEKNNLPGAIFTSFCG-GAEIGEAIAKDTRIPLVS 241 (508)
T ss_pred CCcchHHHHHHHHhHHHHcCCEEEeeCCCcChHHHHHHHHHHHHHHHHcCCCcccEEEecC-ChHHHHHHhcCCCCCEEE
Confidence 9999999999999999999999999999999999887 67888999999999999998 777899999999999999
Q ss_pred EeCCHHHHHHHHHHHhhCCCCceeeeCCCCCceeecCCCCHHHHHHHHHHHHhcccCCccccCcEEEEeCccHHHHHHHH
Q 015031 156 FTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKL 235 (414)
Q Consensus 156 ~tGs~~~~~~i~~~~~~~~~~~~~~e~gG~~~~iV~~dadl~~a~~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f~~~l 235 (414)
||||+++|+.|.+.++ ++.+|+++|+|||||+||++|||++.|++.+++++|.|+||.|++++++|||+++||+|+++|
T Consensus 242 fTGS~~~G~~v~~~aa-~~~~~~~lElgGknp~iV~~dADl~~Aa~~i~~~~f~~~GQ~C~a~~rv~V~~~i~d~f~~~l 320 (508)
T PLN02315 242 FTGSSKVGLMVQQTVN-ARFGKCLLELSGNNAIIVMDDADIQLAVRSVLFAAVGTAGQRCTTCRRLLLHESIYDDVLEQL 320 (508)
T ss_pred EECCHHHHHHHHHHHH-hcCCCEEEecCCCCeEEECCCCCHHHHHHHHHHHHHHhcCCCCCCCeEEEEeHHHHHHHHHHH
Confidence 9999999999999887 788999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhccccCCCCCCCCCccccCCHHHHHHHHHHHHHhhhcCCeEeeCCcccCCCCceeeeEEEEeCCCCCccccccccc
Q 015031 236 VEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIGKKGYYIEPTIFTNVTEDMLIAKNEIFG 315 (414)
Q Consensus 236 ~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fg 315 (414)
+++++++++|+|.++++++||+++..+++++.+++++++++|+++++||...+.+|+|++|||+ +++++|++++||+||
T Consensus 321 ~~~~~~l~vG~p~~~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~vl~gG~~~~~~g~~~~Ptvl-~v~~~~~i~~eE~FG 399 (508)
T PLN02315 321 LTVYKQVKIGDPLEKGTLLGPLHTPESKKNFEKGIEIIKSQGGKILTGGSAIESEGNFVQPTIV-EISPDADVVKEELFG 399 (508)
T ss_pred HHHHHhcCCCCCCCCCCCCCCCcCHHHHHHHHHHHHHHHHCCCEEEECCCcCCCCCeEEecEEE-ecCCCChHHhCCCcC
Confidence 9999999999999999999999999999999999999999999999999865457999999999 699999999999999
Q ss_pred ceEEEeeeCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHHh--ccceeEEEECCcCC-CCCCCCccCCCCCCCCCcchH
Q 015031 316 PVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVSR--SIRAGIIWINCYFA-FDSDCPYGGYKMSGFGRDCGL 392 (414)
Q Consensus 316 Pvl~v~~~~~~~eai~~~n~~~~gl~~sv~s~d~~~~~~~~~--~l~~g~v~vN~~~~-~~~~~pfgG~~~sG~g~~~g~ 392 (414)
||++|++|+|+||||+++|+++|||++||||+|.+.++++++ ++++|.|+||+... ..+.+||||+|.||+|+++|.
T Consensus 400 PVl~V~~~~~~deai~~aN~~~~gL~a~Vft~d~~~a~~~~~~~~l~~G~v~iN~~~~~~~~~~PfGG~k~SG~G~~~G~ 479 (508)
T PLN02315 400 PVLYVMKFKTLEEAIEINNSVPQGLSSSIFTRNPETIFKWIGPLGSDCGIVNVNIPTNGAEIGGAFGGEKATGGGREAGS 479 (508)
T ss_pred CEEEEEEeCCHHHHHHHHhCCCCCCeEEEEcCCHHHHHHHhhhcccceeEEEEcCCCCCCCCCCCCCccccccCCccchH
Confidence 999999999999999999999999999999999999999985 79999999998654 346789999999999999999
Q ss_pred HHHHhhhcccEEEEeC
Q 015031 393 ESLHNYLQVKSVVTPI 408 (414)
Q Consensus 393 ~~~~~~~~~k~i~~~~ 408 (414)
+++++||++|+|+.++
T Consensus 480 ~~l~~ft~~k~v~~~~ 495 (508)
T PLN02315 480 DSWKQYMRRSTCTINY 495 (508)
T ss_pred HHHHHHhhEEEEEEec
Confidence 9999999999998765
|
|
| >cd07144 ALDH_ALD2-YMR170C Saccharomyces cerevisiae aldehyde dehydrogenase 2 (YMR170c)-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.2e-87 Score=683.41 Aligned_cols=406 Identities=54% Similarity=0.900 Sum_probs=381.8
Q ss_pred CHHHHHHHHHhHHHHHHHHHHHcCCChHHHhhccHHHHHHHHHHHHHhhhhhcCceeccccCccccccccCCcEEEEEcC
Q 015031 1 MLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMSRALQGYTLREPIGVVGHIIP 80 (414)
Q Consensus 1 L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p 80 (414)
|+++++.|++++++|++++++|+|||..+....|+..+++.++++++++++..+...+...+...+..++|+|||++|+|
T Consensus 74 L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~~~~~~g~~~~~~~~~~~~~~~~P~GvV~~I~p 153 (484)
T cd07144 74 LDKLADLVEKNRDLLAAIEALDSGKPYHSNALGDLDEIIAVIRYYAGWADKIQGKTIPTSPNKLAYTLHEPYGVCGQIIP 153 (484)
T ss_pred HHHHHHHHHHhHHHHHHHHHHHcCCChHHHHHHHHHHHHHHHHHHHHHHHHhcCceecCCCCceEEEEEecceEEEEECc
Confidence 57899999999999999999999999876556799999999999999887775544433334456788999999999999
Q ss_pred CCcChHhhHHHHHHHHhcCCeEEEecCCCChhHHHHHHHHHHHcCCCCCeEEEEcCCchhHHHHHHhCCCcCeEEEeCCH
Q 015031 81 WNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGST 160 (414)
Q Consensus 81 ~n~P~~~~~~~~~~ALaaGN~vv~kps~~~~~~~~~l~~~~~~aglp~g~v~~~~~~~~~~~~~l~~~~~~~~v~~tGs~ 160 (414)
||||+...++++++||++||+||+|||+.+|.++..+.+++.++|+|+|++|++++++.+.++.|..||++|.|.||||+
T Consensus 154 ~N~P~~~~~~~~~~ALaaGN~VV~Kps~~~p~~~~~l~~~~~~aglP~gv~~~v~g~~~~~~~~L~~~~~vd~V~fTGS~ 233 (484)
T cd07144 154 WNYPLAMAAWKLAPALAAGNTVVIKPAENTPLSLLYFANLVKEAGFPPGVVNIIPGYGAVAGSALAEHPDVDKIAFTGST 233 (484)
T ss_pred CCCHHHHHHHHHHHHHHcCCEEEEECCccchHHHHHHHHHHHHhCcCCCcEEEEecCCchHHHHHhcCCCcCEEEEECcH
Confidence 99999999999999999999999999999999999999999999999999999999777889999999999999999999
Q ss_pred HHHHHHHHHHhhCCCCceeeeCCCCCceeecCCCCHHHHHHHHHHHHhcccCCccccCcEEEEeCccHHHHHHHHHHHHh
Q 015031 161 DVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAK 240 (414)
Q Consensus 161 ~~~~~i~~~~~~~~~~~~~~e~gG~~~~iV~~dadl~~a~~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f~~~l~~~~~ 240 (414)
.+|+.|.+.++ .+++|+++|+|||||+||++|||++.|++.+++++|+|+||.|+++++||||++++|+|+++|+++++
T Consensus 234 ~~g~~i~~~a~-~~~~~~~lElGGk~p~iV~~dADl~~Aa~~i~~~~f~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~ 312 (484)
T cd07144 234 ATGRLVMKAAA-QNLKAVTLECGGKSPALVFEDADLDQAVKWAAAGIMYNSGQNCTATSRIYVQESIYDKFVEKFVEHVK 312 (484)
T ss_pred HHHHHHHHHHH-hcCCeEEEEcCCCCeEEECCCCCHHHHHHHHHHHHHhcCCCCCCCCceEEEcHHHHHHHHHHHHHHHH
Confidence 99999999887 78899999999999999999999999999999999999999999999999999999999999999998
Q ss_pred c-cccCCCCCCCCCccccCCHHHHHHHHHHHHHhhhcCCeEeeCCcccC---CCCceeeeEEEEeCCCCCcccccccccc
Q 015031 241 A-WVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIG---KKGYYIEPTIFTNVTEDMLIAKNEIFGP 316 (414)
Q Consensus 241 ~-~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~---~~g~~~~Ptvl~~~~~~~~~~~~E~fgP 316 (414)
+ +++|+|.++++++||++++.+++++.+++++++++|+++++||.... ..|+|++|||+.+++++|++++||+|||
T Consensus 313 ~~~~~G~p~~~~~~~gpli~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~~~~~~g~~~~Ptvl~~v~~~~~~~~eE~FgP 392 (484)
T cd07144 313 QNYKVGSPFDDDTVVGPQVSKTQYDRVLSYIEKGKKEGAKLVYGGEKAPEGLGKGYFIPPTIFTDVPQDMRIVKEEIFGP 392 (484)
T ss_pred hhCCcCCCCCCCCcCCCCcCHHHHHHHHHHHHHHHHCCCEEEeCCCcCcccCCCCceECCEEEeCCCCCCchhhCCCCCc
Confidence 5 89999999999999999999999999999999999999999997643 3689999999999999999999999999
Q ss_pred eEEEeeeCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHHhccceeEEEECCcCCCCCCCCccCCCCCCCCCcchHHHHH
Q 015031 317 VMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSIRAGIIWINCYFAFDSDCPYGGYKMSGFGRDCGLESLH 396 (414)
Q Consensus 317 vl~v~~~~~~~eai~~~n~~~~gl~~sv~s~d~~~~~~~~~~l~~g~v~vN~~~~~~~~~pfgG~~~sG~g~~~g~~~~~ 396 (414)
|++|++|+|++|||+++|+++|||++||||+|.+.++++++++++|+|+||+.....+.+||||+|.||+|+++|.+|++
T Consensus 393 vl~v~~~~~~~eai~~~n~~~~gLsa~i~t~d~~~a~~~~~~l~~G~v~iN~~~~~~~~~PfGG~k~SG~G~~~g~~~l~ 472 (484)
T cd07144 393 VVVISKFKTYEEAIKKANDTTYGLAAAVFTKDIRRAHRVARELEAGMVWINSSNDSDVGVPFGGFKMSGIGRELGEYGLE 472 (484)
T ss_pred eEEEeccCCHHHHHHHHhCCCCCceEEEECCCHHHHHHHHHhcCcCEEEECCCCCCCCCCCcCCcccCcCCCCchHHHHH
Confidence 99999999999999999999999999999999999999999999999999998776778999999999999999999999
Q ss_pred hhhcccEEEEe
Q 015031 397 NYLQVKSVVTP 407 (414)
Q Consensus 397 ~~~~~k~i~~~ 407 (414)
+||++|+++.+
T Consensus 473 ~~t~~k~v~~~ 483 (484)
T cd07144 473 TYTQTKAVHIN 483 (484)
T ss_pred HhhceEEEEEe
Confidence 99999999764
|
NAD(P)+-dependent Saccharomyces cerevisiae aldehyde dehydrogenase 2 (YMR170c, ALD5, EC=1.2.1.5) and other similar sequences, are present in this CD. |
| >PRK13473 gamma-aminobutyraldehyde dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.8e-87 Score=681.59 Aligned_cols=406 Identities=40% Similarity=0.678 Sum_probs=381.7
Q ss_pred CHHHHHHHHHhHHHHHHHHHHHcCCChHHHhhccHHHHHHHHHHHHHhhhhhcCceecc-ccCccccccccCCcEEEEEc
Q 015031 1 MLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKM-SRALQGYTLREPIGVVGHII 79 (414)
Q Consensus 1 L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~~~~~~~~~~~~-~~~~~~~~~~~P~Gvv~~i~ 79 (414)
|+++++.|++++++|++++++|+|||..++...|+..+++.+++++..++.+.+...+. ..+...+.+++|+|||++|+
T Consensus 67 L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~r~P~GVv~~I~ 146 (475)
T PRK13473 67 LLKLADAIEENADEFARLESLNCGKPLHLALNDEIPAIVDVFRFFAGAARCLEGKAAGEYLEGHTSMIRRDPVGVVASIA 146 (475)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCcccccCCCCceeEEEEecceeEEEEc
Confidence 57899999999999999999999999987655699999999999998777665432211 12334678899999999999
Q ss_pred CCCcChHhhHHHHHHHHhcCCeEEEecCCCChhHHHHHHHHHHHcCCCCCeEEEEcCCchhHHHHHHhCCCcCeEEEeCC
Q 015031 80 PWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGS 159 (414)
Q Consensus 80 p~n~P~~~~~~~~~~ALaaGN~vv~kps~~~~~~~~~l~~~~~~aglp~g~v~~~~~~~~~~~~~l~~~~~~~~v~~tGs 159 (414)
|||||+...++++++||++||+||+|||+.+|.++..+.+++.++ +|+|++|++++++.+.+..|+.|+++|.|.||||
T Consensus 147 p~N~P~~~~~~~i~~ALaaGN~VIlKps~~~p~~~~~l~~~~~~a-lP~gv~~~v~g~~~~~~~~l~~~~~vd~V~fTGs 225 (475)
T PRK13473 147 PWNYPLMMAAWKLAPALAAGNTVVLKPSEITPLTALKLAELAADI-LPPGVLNVVTGRGATVGDALVGHPKVRMVSLTGS 225 (475)
T ss_pred cCChHHHHHHHHHHHHHhcCCEEEEECCCCChHHHHHHHHHHHHh-CCcCcEEEEecCchHHHHHHhcCCCCCEEEEECc
Confidence 999999999999999999999999999999999999999999999 9999999999977788999999999999999999
Q ss_pred HHHHHHHHHHHhhCCCCceeeeCCCCCceeecCCCCHHHHHHHHHHHHhcccCCccccCcEEEEeCccHHHHHHHHHHHH
Q 015031 160 TDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKA 239 (414)
Q Consensus 160 ~~~~~~i~~~~~~~~~~~~~~e~gG~~~~iV~~dadl~~a~~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f~~~l~~~~ 239 (414)
+++|+.|.+.++ .+++|+++|+|||||+||++|||++.|++.+++++|+|+||.|+++++||||++++|+|+++|++++
T Consensus 226 ~~~g~~i~~~aa-~~~~~~~lElgG~~p~iV~~dADld~Aa~~i~~~~f~n~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~ 304 (475)
T PRK13473 226 IATGKHVLSAAA-DSVKRTHLELGGKAPVIVFDDADLDAVVEGIRTFGYYNAGQDCTAACRIYAQRGIYDDLVAKLAAAV 304 (475)
T ss_pred HHHHHHHHHHHh-hcCCcEEEECCCCCeeEECCCCCHHHHHHHHHHHHHhcCCCCCCCCeEEEEcHHHHHHHHHHHHHHH
Confidence 999999999987 7889999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hccccCCCCCCCCCccccCCHHHHHHHHHHHHHhhhcC-CeEeeCCcccCCCCceeeeEEEEeCCCCCcccccccccceE
Q 015031 240 KAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREG-ATLLTGGKPIGKKGYYIEPTIFTNVTEDMLIAKNEIFGPVM 318 (414)
Q Consensus 240 ~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~g-a~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl 318 (414)
+++++|+|.++++++||++++.++++++++++++.++| +++++||....+.|+|++|||+.++++++.+++||+||||+
T Consensus 305 ~~l~~G~p~~~~~~~gpli~~~~~~~v~~~i~~a~~~G~a~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl 384 (475)
T PRK13473 305 ATLKVGDPDDEDTELGPLISAAHRDRVAGFVERAKALGHIRVVTGGEAPDGKGYYYEPTLLAGARQDDEIVQREVFGPVV 384 (475)
T ss_pred HhCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHcCCeEEEECCCcCCCCceeEcCEEEecCCCCChhhhCCccCCeE
Confidence 99999999999999999999999999999999999999 99999998754468999999999999999999999999999
Q ss_pred EEeeeCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHHhccceeEEEECCcCCCCCCCCccCCCCCCCCCcchHHHHHhh
Q 015031 319 ALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSIRAGIIWINCYFAFDSDCPYGGYKMSGFGRDCGLESLHNY 398 (414)
Q Consensus 319 ~v~~~~~~~eai~~~n~~~~gl~~sv~s~d~~~~~~~~~~l~~g~v~vN~~~~~~~~~pfgG~~~sG~g~~~g~~~~~~~ 398 (414)
+|++|+|.||||+++|+++|||++||||+|.+.+.++++++++|+|+||++....+.+||||+|.||+|+++|.+|+++|
T Consensus 385 ~v~~~~~~deai~~~N~~~~gL~a~v~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~PfGG~k~SG~G~~~g~~~~~~~ 464 (475)
T PRK13473 385 SVTPFDDEDQAVRWANDSDYGLASSVWTRDVGRAHRVSARLQYGCTWVNTHFMLVSEMPHGGQKQSGYGKDMSLYGLEDY 464 (475)
T ss_pred EEeccCCHHHHHHHHhCCCCCceEEEECCCHHHHHHHHHhCCcceEEECCCCCCCCCCCCCCccccccCccchHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999877777899999999999999999999999
Q ss_pred hcccEEEEeC
Q 015031 399 LQVKSVVTPI 408 (414)
Q Consensus 399 ~~~k~i~~~~ 408 (414)
|++|+++++|
T Consensus 465 t~~k~i~~~~ 474 (475)
T PRK13473 465 TVVRHVMVKH 474 (475)
T ss_pred hceEEEEEec
Confidence 9999998765
|
|
| >TIGR02299 HpaE 5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=4e-87 Score=682.18 Aligned_cols=405 Identities=43% Similarity=0.744 Sum_probs=379.9
Q ss_pred CHHHHHHHHHhHHHHHHHHHHHcCCChHHHhhccHHHHHHHHHHHHHhhhh-hcCceeccccCccccccccCCcEEEEEc
Q 015031 1 MLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADK-IHGEVLKMSRALQGYTLREPIGVVGHII 79 (414)
Q Consensus 1 L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~~~~-~~~~~~~~~~~~~~~~~~~P~Gvv~~i~ 79 (414)
|+++++.|++++++|++++++|+||+..++. .|+..+++.++++++.+.+ ..+...+.. ....+.+++|+|||++|+
T Consensus 66 L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~-~ev~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~P~Gvv~~I~ 143 (488)
T TIGR02299 66 LHKIADLIEQHADEIAVLECLDCGQPLRQTR-QQVIRAAENFRFFADKCEEAMDGRTYPVD-THLNYTVRVPVGPVGLIT 143 (488)
T ss_pred HHHHHHHHHHhHHHHHHHHHHHcCCcHHHHH-HHHHHHHHHHHHHHHhHHHhcCCccccCC-CceEEEEEEecceEEEEC
Confidence 5789999999999999999999999999764 7999999999999987763 333333222 344678899999999999
Q ss_pred CCCcChHhhHHHHHHHHhcCCeEEEecCCCChhHHHHHHHHHHHcCCCCCeEEEEcCCchhHHHHHHhCCCcCeEEEeCC
Q 015031 80 PWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGS 159 (414)
Q Consensus 80 p~n~P~~~~~~~~~~ALaaGN~vv~kps~~~~~~~~~l~~~~~~aglp~g~v~~~~~~~~~~~~~l~~~~~~~~v~~tGs 159 (414)
|||||+...++++++||++||+||+|||+.+|.++..+.+++.++|+|+|++|++++++++.++.|..|+.+|.|.||||
T Consensus 144 p~N~P~~~~~~~~~~ALaaGN~VIlKps~~~p~~~~~l~~~~~~aGlP~gvv~~v~g~~~~~~~~l~~~~~v~~V~fTGS 223 (488)
T TIGR02299 144 PWNAPFMLSTWKIAPALAFGNTVVLKPAEWSPLTAARLAEIAKEAGLPDGVFNLVHGFGEEAGKALVAHPDVKAVSFTGE 223 (488)
T ss_pred CCccHHHHHHHHHHHHHHcCCEEEEECchhchHHHHHHHHHHHHcCcChhheeEEeCCchHHHHHHhcCCCcCEEEEECc
Confidence 99999999999999999999999999999999999999999999999999999999877778899999999999999999
Q ss_pred HHHHHHHHHHHhhCCCCceeeeCCCCCceeecCCCCHHHHHHHHHHHHhcccCCccccCcEEEEeCccHHHHHHHHHHHH
Q 015031 160 TDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKA 239 (414)
Q Consensus 160 ~~~~~~i~~~~~~~~~~~~~~e~gG~~~~iV~~dadl~~a~~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f~~~l~~~~ 239 (414)
+.+|+.|.+.++ ++++|+++|+|||||+||++|||++.|++.+++++|.|+||.|+++++||||++++|+|+++|++++
T Consensus 224 ~~~G~~i~~~aa-~~l~~~~lElGGknp~iV~~dAdl~~A~~~i~~~~~~~~GQ~C~a~~rv~V~~~v~d~f~~~l~~~~ 302 (488)
T TIGR02299 224 TATGSIIMRNGA-DTLKRFSMELGGKSPVIVFDDADLERALDAVVFMIFSFNGERCTASSRLLVQESIAEDFVEKLVERV 302 (488)
T ss_pred HHHHHHHHHHHH-hcCCeEEEEcCCCCeEEECCCCCHHHHHHHHHHHHHhccCCCCCCCcEEEEcHHHHHHHHHHHHHHH
Confidence 999999999987 7899999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hccccCCCCCCCCCccccCCHHHHHHHHHHHHHhhhcCCeEeeCCcccC-------CCCceeeeEEEEeCCCCCcccccc
Q 015031 240 KAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIG-------KKGYYIEPTIFTNVTEDMLIAKNE 312 (414)
Q Consensus 240 ~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~-------~~g~~~~Ptvl~~~~~~~~~~~~E 312 (414)
+++++|+|.++++++||++++.+++++++++++++++|+++++||.... ++|+|++|||+.+++++|++++||
T Consensus 303 ~~l~~g~p~~~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~v~~gg~~~~~~~~~~~~~g~~~~Ptvl~~~~~~~~i~~eE 382 (488)
T TIGR02299 303 RAIRVGHPLDPETEVGPLIHPEHLAKVLGYVEAAEKEGATILVGGERAPTFRGEDLGRGNYVLPTVFTGADNHMRIAQEE 382 (488)
T ss_pred hhCCcCCCCCCCCCCCCCcCHHHHHHHHHHHHHHHhCCCEEEeCCccCcccccccCCCCeEEccEEEecCCCCCchhhCC
Confidence 9999999999999999999999999999999999999999999997532 258999999999999999999999
Q ss_pred cccceEEEeeeCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHHhccceeEEEECCcCCCCCCCCccCCCCCCCCCcchH
Q 015031 313 IFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSIRAGIIWINCYFAFDSDCPYGGYKMSGFGRDCGL 392 (414)
Q Consensus 313 ~fgPvl~v~~~~~~~eai~~~n~~~~gl~~sv~s~d~~~~~~~~~~l~~g~v~vN~~~~~~~~~pfgG~~~sG~g~~~g~ 392 (414)
+||||++|++|+|.||||+++|+++|||++||||+|.+.++++++++++|.|+||+.....+.+||||+|.||+|+++|.
T Consensus 383 ~FgPvl~v~~~~~~~eai~~~N~~~~gL~a~v~t~d~~~a~~~~~~l~~G~v~iN~~~~~~~~~PfGG~k~SG~G~~~g~ 462 (488)
T TIGR02299 383 IFGPVLTVIPFKDEEEAIEKANDTRYGLAGYVWTNDVGRAHRVALALEAGMIWVNSQNVRHLPTPFGGVKASGIGREGGT 462 (488)
T ss_pred CcCCeEEEEeeCCHHHHHHHHhCCCCCceEEEEcCCHHHHHHHHHhCCcCeEEECCCCCCCCCCCCCCCccCcCCccchH
Confidence 99999999999999999999999999999999999999999999999999999998877667899999999999999999
Q ss_pred HHHHhhhcccEEEEeC
Q 015031 393 ESLHNYLQVKSVVTPI 408 (414)
Q Consensus 393 ~~~~~~~~~k~i~~~~ 408 (414)
+|+++||++|+++++.
T Consensus 463 ~~~~~~~~~k~i~~~~ 478 (488)
T TIGR02299 463 YSFDFYTETKNVALAL 478 (488)
T ss_pred HHHHHHhceEEEEEec
Confidence 9999999999998865
|
This model represents the dehydrogenase responsible for the conversion of 5-carboxymethyl-2-hydroxymuconate semialdehyde to 5-carboxymethyl-2-hydroxymuconate (a tricarboxylic acid). This is the step in the degradation of 4-hydroxyphenylacetic acid via homoprotocatechuate following the oxidative opening of the aromatic ring. |
| >cd07107 ALDH_PhdK-like Nocardioides 2-carboxybenzaldehyde dehydrogenase, PhdK-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.2e-87 Score=676.97 Aligned_cols=404 Identities=44% Similarity=0.738 Sum_probs=380.1
Q ss_pred CHHHHHHHHHhHHHHHHHHHHHcCCChHHHhhccHHHHHHHHHHHHHhhhhhcCceeccccCccccccccCCcEEEEEcC
Q 015031 1 MLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMSRALQGYTLREPIGVVGHIIP 80 (414)
Q Consensus 1 L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p 80 (414)
|+++++.|++|+++|++++++|+|||..++ ..|+..+++.+++++...+...+...+...+...+.+++|+|||++|+|
T Consensus 47 L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a-~~ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p 125 (456)
T cd07107 47 LRELATRLREHAEELALIDALDCGNPVSAM-LGDVMVAAALLDYFAGLVTELKGETIPVGGRNLHYTLREPYGVVARIVA 125 (456)
T ss_pred HHHHHHHHHHhHHHHHHHHHHhcCCCHHHH-HHHHHHHHHHHHHHHHHHHHhCCccccCCCCceEEEEEecceEEEEECC
Confidence 578999999999999999999999999975 6799999999999998776665554443334566789999999999999
Q ss_pred CCcChHhhHHHHHHHHhcCCeEEEecCCCChhHHHHHHHHHHHcCCCCCeEEEEcCCchhHHHHHHhCCCcCeEEEeCCH
Q 015031 81 WNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGST 160 (414)
Q Consensus 81 ~n~P~~~~~~~~~~ALaaGN~vv~kps~~~~~~~~~l~~~~~~aglp~g~v~~~~~~~~~~~~~l~~~~~~~~v~~tGs~ 160 (414)
||||+...++++++||++||+||+|||+.+|.++..+.+++.++ +|+|++|++++++.+.++.|+.||+++.|.||||+
T Consensus 126 ~N~P~~~~~~~~~~ALaaGN~VV~Kps~~~p~~~~~l~~~~~~~-lP~gvv~~v~g~~~~~~~~l~~~~~i~~v~fTGs~ 204 (456)
T cd07107 126 FNHPLMFAAAKIAAPLAAGNTVVVKPPEQAPLSALRLAELAREV-LPPGVFNILPGDGATAGAALVRHPDVKRIALIGSV 204 (456)
T ss_pred cccHHHHHHHHHhHHHHcCCEEEEeCCCCChHHHHHHHHHHHHh-CCcCcEEEEeCCCchHHHHHhcCCCCCEEEEECcH
Confidence 99999999999999999999999999999999999999999996 99999999999777789999999999999999999
Q ss_pred HHHHHHHHHHhhCCCCceeeeCCCCCceeecCCCCHHHHHHHHHHHH-hcccCCccccCcEEEEeCccHHHHHHHHHHHH
Q 015031 161 DVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGI-LFNKGEICVASSRVYVQEGIYDEFEKKLVEKA 239 (414)
Q Consensus 161 ~~~~~i~~~~~~~~~~~~~~e~gG~~~~iV~~dadl~~a~~~i~~~~-~~~~Gq~C~a~~~v~V~~~~~~~f~~~l~~~~ 239 (414)
++|+.|.+.++ .+++|+++|+|||||+||++|||++.|++.+++++ |.|+||.|+++++||||++++|+|+++|++++
T Consensus 205 ~~g~~i~~~aa-~~~~~~~lElgG~~p~iV~~dadl~~Aa~~i~~~~~f~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~ 283 (456)
T cd07107 205 PTGRAIMRAAA-EGIKHVTLELGGKNALIVFPDADPEAAADAAVAGMNFTWCGQSCGSTSRLFVHESIYDEVLARVVERV 283 (456)
T ss_pred HHHHHHHHHHh-cCCCeEEEECCCCCeEEECCCCCHHHHHHHHHHhchhhcCCCCCcCCcEEEEcHHHHHHHHHHHHHHH
Confidence 99999999987 78999999999999999999999999999999995 89999999999999999999999999999999
Q ss_pred hccccCCCCCCCCCccccCCHHHHHHHHHHHHHhhhcCCeEeeCCcccC----CCCceeeeEEEEeCCCCCccccccccc
Q 015031 240 KAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIG----KKGYYIEPTIFTNVTEDMLIAKNEIFG 315 (414)
Q Consensus 240 ~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~----~~g~~~~Ptvl~~~~~~~~~~~~E~fg 315 (414)
+++++|+|.++++++||++++.++++++++++++.++|+++++||.... ..|+|++|||+.+++++|++++||+||
T Consensus 284 ~~l~~g~p~~~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~v~~gG~~~~~~~~~~g~~~~PTvl~~v~~~~~i~~eE~FG 363 (456)
T cd07107 284 AAIKVGDPTDPATTMGPLVSRQQYDRVMHYIDSAKREGARLVTGGGRPEGPALEGGFYVEPTVFADVTPGMRIAREEIFG 363 (456)
T ss_pred HhCCCCCCCCCCCCcCcccCHHHHHHHHHHHHHHHHCCCEEEeCCCccccccCCCCceECCEEEECCCCCChhhhCCCCC
Confidence 9999999999999999999999999999999999999999999997532 358999999999999999999999999
Q ss_pred ceEEEeeeCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHHhccceeEEEECCcCCCCCCCCccCCCCCCCCCcchHHHH
Q 015031 316 PVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSIRAGIIWINCYFAFDSDCPYGGYKMSGFGRDCGLESL 395 (414)
Q Consensus 316 Pvl~v~~~~~~~eai~~~n~~~~gl~~sv~s~d~~~~~~~~~~l~~g~v~vN~~~~~~~~~pfgG~~~sG~g~~~g~~~~ 395 (414)
||++|++|+|+||||+++|+++|||++||||+|.+.++++++++++|+|+||++....+.+||||+|.||+|+++|++|+
T Consensus 364 Pvl~i~~~~~~~eai~~~n~~~~gL~a~vft~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~pfgG~k~SG~G~~~g~~~~ 443 (456)
T cd07107 364 PVLSVLRWRDEAEMVAQANGVEYGLTAAIWTNDISQAHRTARRVEAGYVWINGSSRHFLGAPFGGVKNSGIGREECLEEL 443 (456)
T ss_pred ceEEEEeeCCHHHHHHHHhCCCCcceEEEECCCHHHHHHHHHhcCcCEEEECCCCCCCCCCCcCCcccccCCcCchHHHH
Confidence 99999999999999999999999999999999999999999999999999999887777899999999999999999999
Q ss_pred HhhhcccEEEEe
Q 015031 396 HNYLQVKSVVTP 407 (414)
Q Consensus 396 ~~~~~~k~i~~~ 407 (414)
++||++|+++++
T Consensus 444 ~~~~~~k~v~~~ 455 (456)
T cd07107 444 LSYTQEKNVNVR 455 (456)
T ss_pred HHhhceEEEEEe
Confidence 999999999875
|
Nocardioides sp. strain KP72-carboxybenzaldehyde dehydrogenase (PhdK), an enzyme involved in phenanthrene degradation, and other similar sequences, are present in this CD. |
| >cd07097 ALDH_KGSADH-YcbD Bacillus subtilis NADP+-dependent alpha-ketoglutaric semialdehyde dehydrogenase ycbD-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.4e-87 Score=679.37 Aligned_cols=403 Identities=44% Similarity=0.718 Sum_probs=378.9
Q ss_pred CHHHHHHHHHhHHHHHHHHHHHcCCChHHHhhccHHHHHHHHHHHHHhhhhhcCceecc-ccCccccccccCCcEEEEEc
Q 015031 1 MLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKM-SRALQGYTLREPIGVVGHII 79 (414)
Q Consensus 1 L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~~~~~~~~~~~~-~~~~~~~~~~~P~Gvv~~i~ 79 (414)
|+++++.|++|+++|++++++|+|||..++ ..|+..+++.+++++...++..+...+. ..+...+++++|+|||++|+
T Consensus 65 L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a-~~ev~~~~~~l~~~a~~~~~~~g~~~~~~~~~~~~~~~~~P~GVv~~I~ 143 (473)
T cd07097 65 LDKAGDELEARKEELARLLTREEGKTLPEA-RGEVTRAGQIFRYYAGEALRLSGETLPSTRPGVEVETTREPLGVVGLIT 143 (473)
T ss_pred HHHHHHHHHHhHHHHHHHHHHHcCCCHHHH-HHHHHHHHHHHHHHHHHHHHhcCcccccCCCCceEEEEEEeeeeEEEEc
Confidence 578999999999999999999999999976 4699999999999998877665543322 13455789999999999999
Q ss_pred CCCcChHhhHHHHHHHHhcCCeEEEecCCCChhHHHHHHHHHHHcCCCCCeEEEEcCCchhHHHHHHhCCCcCeEEEeCC
Q 015031 80 PWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGS 159 (414)
Q Consensus 80 p~n~P~~~~~~~~~~ALaaGN~vv~kps~~~~~~~~~l~~~~~~aglp~g~v~~~~~~~~~~~~~l~~~~~~~~v~~tGs 159 (414)
|||||+...++++++||++||+||+|||+.+|.++..+.+++.++|+|+|++|++++++.+++..|+.|+++|.|.||||
T Consensus 144 P~N~Pl~~~~~~i~~ALaaGN~VIlKps~~~p~~~~~l~~~~~~aGlP~gvv~vv~g~~~~~~~~l~~~~~v~~v~fTGs 223 (473)
T cd07097 144 PWNFPIAIPAWKIAPALAYGNTVVFKPAELTPASAWALVEILEEAGLPAGVFNLVMGSGSEVGQALVEHPDVDAVSFTGS 223 (473)
T ss_pred ccChHHHHHHHHHHHHHHcCCEEEEeCCCCCcHHHHHHHHHHHHcCCCCcceEEeccCchHHHHHHhcCCCCCEEEEECc
Confidence 99999999999999999999999999999999999999999999999999999999977778999999999999999999
Q ss_pred HHHHHHHHHHHhhCCCCceeeeCCCCCceeecCCCCHHHHHHHHHHHHhcccCCccccCcEEEEeCccHHHHHHHHHHHH
Q 015031 160 TDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKA 239 (414)
Q Consensus 160 ~~~~~~i~~~~~~~~~~~~~~e~gG~~~~iV~~dadl~~a~~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f~~~l~~~~ 239 (414)
+.+|+.|.+.++ ++++|+++|+|||||+||++|||++.|++.+++++|.|+||.|+++++||||++++|+|+++|++++
T Consensus 224 ~~~g~~i~~~aa-~~~~~~~lElGGk~~~iV~~dadl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~ 302 (473)
T cd07097 224 TAVGRRIAAAAA-ARGARVQLEMGGKNPLVVLDDADLDLAVECAVQGAFFSTGQRCTASSRLIVTEGIHDRFVEALVERT 302 (473)
T ss_pred HHHHHHHHHHHh-ccCCcEEEECCCCCeeEECCCCCHHHHHHHHHHHHHhccCCCCcCCeeEEEehhHHHHHHHHHHHHH
Confidence 999999999988 8899999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hccccCCCCCCCCCccccCCHHHHHHHHHHHHHhhhcCCeEeeCCcccC--CCCceeeeEEEEeCCCCCcccccccccce
Q 015031 240 KAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIG--KKGYYIEPTIFTNVTEDMLIAKNEIFGPV 317 (414)
Q Consensus 240 ~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~--~~g~~~~Ptvl~~~~~~~~~~~~E~fgPv 317 (414)
+++++|+|.++++++||++++.+++++++++++++++|+++++||.... +.|+|++|||+.+++++|++++||+||||
T Consensus 303 ~~~~~g~p~~~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~v~~gg~~~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPv 382 (473)
T cd07097 303 KALKVGDALDEGVDIGPVVSERQLEKDLRYIEIARSEGAKLVYGGERLKRPDEGYYLAPALFAGVTNDMRIAREEIFGPV 382 (473)
T ss_pred HhCCCCCCCCCCCcCCCCCCHHHHHHHHHHHHHHHHCCCEEEeCCccCCCCCCCeEEeeEEeccCCCCChhhhCCCcCce
Confidence 9999999999999999999999999999999999999999999997643 35899999999999999999999999999
Q ss_pred EEEeeeCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHHhccceeEEEECCcCC-CCCCCCccCCCCCCCC-CcchHHHH
Q 015031 318 MALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSIRAGIIWINCYFA-FDSDCPYGGYKMSGFG-RDCGLESL 395 (414)
Q Consensus 318 l~v~~~~~~~eai~~~n~~~~gl~~sv~s~d~~~~~~~~~~l~~g~v~vN~~~~-~~~~~pfgG~~~sG~g-~~~g~~~~ 395 (414)
++|++|+|.|||++++|+++|||+++|||+|.+.++++++++++|+|+||++.. ..+.+||||+|.||+| +++|.+|+
T Consensus 383 l~v~~~~~~~eai~~~n~~~~gL~~~v~t~d~~~a~~~~~~l~~g~v~iN~~~~~~~~~~PfGG~~~SG~G~~~~g~~~l 462 (473)
T cd07097 383 AAVIRVRDYDEALAIANDTEFGLSAGIVTTSLKHATHFKRRVEAGVVMVNLPTAGVDYHVPFGGRKGSSYGPREQGEAAL 462 (473)
T ss_pred EEEeccCCHHHHHHHHhCCCCCceEEEECCCHHHHHHHHHhCCcCeEEECCCCCCCCCCCCCCCcccccCcccCCcHHHH
Confidence 999999999999999999999999999999999999999999999999998764 3467899999999999 89999999
Q ss_pred HhhhcccEEE
Q 015031 396 HNYLQVKSVV 405 (414)
Q Consensus 396 ~~~~~~k~i~ 405 (414)
++||++|+|+
T Consensus 463 ~~f~~~k~v~ 472 (473)
T cd07097 463 EFYTTIKTVY 472 (473)
T ss_pred HHhhceeEEe
Confidence 9999999985
|
Kinetic studies of the Bacillus subtilis ALDH-like ycbD protein, which is involved in d-glucarate/d-galactarate utilization, reveal that it is a NADP+-dependent, alpha-ketoglutaric semialdehyde dehydrogenase (KGSADH). KGSADHs (EC 1.2.1.26) catalyze the NAD(P)+-dependent conversion of KGSA to alpha-ketoglutarate. Interestingly, the NADP+-dependent, tetrameric, 2,5-dioxopentanoate dehydrogenase (EC=1.2.1.26), an enzyme involved in the catabolic pathway for D-arabinose in Sulfolobus solfataricus, also clusters in this group. This CD shows a distant phylogenetic relationship to the Azospirillum brasilense KGSADH-II (-III) group. |
| >cd07110 ALDH_F10_BADH Arabidopsis betaine aldehyde dehydrogenase 1 and 2, ALDH family 10A8 and 10A9-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=9e-87 Score=674.91 Aligned_cols=403 Identities=48% Similarity=0.809 Sum_probs=379.3
Q ss_pred CHHHHHHHHHhHHHHHHHHHHHcCCChHHHhhccHHHHHHHHHHHHHhhhhhcC---ceeccc-cCccccccccCCcEEE
Q 015031 1 MLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHG---EVLKMS-RALQGYTLREPIGVVG 76 (414)
Q Consensus 1 L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~~~~~~~---~~~~~~-~~~~~~~~~~P~Gvv~ 76 (414)
|+++++.|++|+++|++++++|+||+..++ ..|+..+++.++++++.++++.. ...+.. .+...+++++|+|||+
T Consensus 47 L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a-~~ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVV~ 125 (456)
T cd07110 47 LRAIAEGVRERREELAELEARDNGKPLDEA-AWDVDDVAGCFEYYADLAEQLDAKAERAVPLPSEDFKARVRREPVGVVG 125 (456)
T ss_pred HHHHHHHHHHhHHHHHHHHHHHcCCCHHHH-HHHHHHHHHHHHHHHHHHHHhhccCCccccCCCCCceeEEEEecceeEE
Confidence 578999999999999999999999999975 46999999999999988876532 112211 3456788999999999
Q ss_pred EEcCCCcChHhhHHHHHHHHhcCCeEEEecCCCChhHHHHHHHHHHHcCCCCCeEEEEcCCchhHHHHHHhCCCcCeEEE
Q 015031 77 HIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSF 156 (414)
Q Consensus 77 ~i~p~n~P~~~~~~~~~~ALaaGN~vv~kps~~~~~~~~~l~~~~~~aglp~g~v~~~~~~~~~~~~~l~~~~~~~~v~~ 156 (414)
+|+|||||+...++++++||++||+||+|||+.+|.++..+.+++.++|+|+|++|++++++.+.++.|+.||++|.|.|
T Consensus 126 ~I~p~N~P~~~~~~~~~~ALaaGN~VV~Kps~~~p~~~~~l~~~~~~aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~V~f 205 (456)
T cd07110 126 LITPWNFPLLMAAWKVAPALAAGCTVVLKPSELTSLTELELAEIAAEAGLPPGVLNVVTGTGDEAGAPLAAHPGIDKISF 205 (456)
T ss_pred EECCCChHHHHHHHHHHHHHHcCCEEEEECcccchHHHHHHHHHHHHcCCCCCcEEEEecCchHHHHHHhcCCCCCEEEE
Confidence 99999999999999999999999999999999999999999999999999999999999977778999999999999999
Q ss_pred eCCHHHHHHHHHHHhhCCCCceeeeCCCCCceeecCCCCHHHHHHHHHHHHhcccCCccccCcEEEEeCccHHHHHHHHH
Q 015031 157 TGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLV 236 (414)
Q Consensus 157 tGs~~~~~~i~~~~~~~~~~~~~~e~gG~~~~iV~~dadl~~a~~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f~~~l~ 236 (414)
|||+.+|+.|.+.++ ++++|+++|+|||||+||++|||++.|++.+++++|+|+||.|+++++||||++++|+|+++|+
T Consensus 206 TGs~~~g~~v~~~aa-~~~~~~~lElgG~~~~iV~~dadl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~d~f~~~l~ 284 (456)
T cd07110 206 TGSTATGSQVMQAAA-QDIKPVSLELGGKSPIIVFDDADLEKAVEWAMFGCFWNNGQICSATSRLLVHESIADAFLERLA 284 (456)
T ss_pred ECCHHHHHHHHHHHh-hcCCeEEEEcCCCCeeEECCCCCHHHHHHHHHHHHHhcCCCCCCCCceEEEcHHHHHHHHHHHH
Confidence 999999999999987 7889999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhccccCCCCCCCCCccccCCHHHHHHHHHHHHHhhhcCCeEeeCCcccC--CCCceeeeEEEEeCCCCCcccccccc
Q 015031 237 EKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIG--KKGYYIEPTIFTNVTEDMLIAKNEIF 314 (414)
Q Consensus 237 ~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~--~~g~~~~Ptvl~~~~~~~~~~~~E~f 314 (414)
++++++++|+|.++++++||++++.+++++++++++++.+|+++++||.... +.|+|+.|||+.+++++|+++++|+|
T Consensus 285 ~~~~~~~~g~p~~~~~~~Gpli~~~~~~~~~~~v~~a~~~Ga~~~~gg~~~~~~~~~~~~~Ptvl~~v~~~~~i~~~E~f 364 (456)
T cd07110 285 TAAEAIRVGDPLEEGVRLGPLVSQAQYEKVLSFIARGKEEGARLLCGGRRPAHLEKGYFIAPTVFADVPTDSRIWREEIF 364 (456)
T ss_pred HHHHhcCCCCCCCCCCCcCCCCCHHHHHHHHHHHHHHHhCCCEEEeCCCcccccCCCCcCCCEEEecCCCCChHhhCCCc
Confidence 9999999999999999999999999999999999999999999999997643 46899999999999999999999999
Q ss_pred cceEEEeeeCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHHhccceeEEEECCcCCCCCCCCccCCCCCCCCCcchHHH
Q 015031 315 GPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSIRAGIIWINCYFAFDSDCPYGGYKMSGFGRDCGLES 394 (414)
Q Consensus 315 gPvl~v~~~~~~~eai~~~n~~~~gl~~sv~s~d~~~~~~~~~~l~~g~v~vN~~~~~~~~~pfgG~~~sG~g~~~g~~~ 394 (414)
|||++|++|+|.|||++++|+++|||+++|||+|.+.++++++++++|+|+||++....+.+||||+|.||+|+++|++|
T Consensus 365 gPvl~v~~~~~~~eai~~~n~~~~gL~~~v~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~PfGG~k~SG~G~~~g~~~ 444 (456)
T cd07110 365 GPVLCVRSFATEDEAIALANDSEYGLAAAVISRDAERCDRVAEALEAGIVWINCSQPCFPQAPWGGYKRSGIGRELGEWG 444 (456)
T ss_pred CCeEEEEecCCHHHHHHHHhCCCCCceEEEECCCHHHHHHHHHhCCcceEEECCCCCCCCCCCCCCcccccCCccchHHH
Confidence 99999999999999999999999999999999999999999999999999999987667789999999999999999999
Q ss_pred HHhhhcccEEE
Q 015031 395 LHNYLQVKSVV 405 (414)
Q Consensus 395 ~~~~~~~k~i~ 405 (414)
+++||+.|+++
T Consensus 445 l~~~~~~k~i~ 455 (456)
T cd07110 445 LDNYLEVKQIT 455 (456)
T ss_pred HHHhcceeEEe
Confidence 99999999985
|
Present in this CD are the Arabidopsis betaine aldehyde dehydrogenase (BADH) 1 (chloroplast) and 2 (mitochondria), also known as, aldehyde dehydrogenase family 10 member A8 and aldehyde dehydrogenase family 10 member A9, respectively, and are putative dehydration- and salt-inducible BADHs (EC 1.2.1.8) that catalyze the oxidation of betaine aldehyde to the compatible solute glycine betaine. |
| >cd07089 ALDH_CddD-AldA-like Rhodococcus ruber 6-oxolauric acid dehydrogenase-like and related proteins | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.5e-87 Score=674.09 Aligned_cols=404 Identities=41% Similarity=0.679 Sum_probs=380.8
Q ss_pred CHHHHHHHHHhHHHHHHHHHHHcCCChHHHhhccHHHHHHHHHHHHHhhhhhcCce-eccc----cCccccccccCCcEE
Q 015031 1 MLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEV-LKMS----RALQGYTLREPIGVV 75 (414)
Q Consensus 1 L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~~~~~~~~~-~~~~----~~~~~~~~~~P~Gvv 75 (414)
|+++++.|++|+++|++++++|+|||..++...|+..+++.+++++..+++..+.. .+.. .+...+++++|+|||
T Consensus 48 L~~~a~~l~~~~~~la~~~~~e~Gk~~~~~~~~ev~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVV 127 (459)
T cd07089 48 LRQLHEALEARKEELRALLVAEVGAPVMTARAMQVDGPIGHLRYFADLADSFPWEFDLPVPALRGGPGRRVVRREPVGVV 127 (459)
T ss_pred HHHHHHHHHHhHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCceecCcccccCCCceeEEEEeeccEE
Confidence 57899999999999999999999999976666799999999999998887654442 2211 245678999999999
Q ss_pred EEEcCCCcChHhhHHHHHHHHhcCCeEEEecCCCChhHHHHHHHHHHHcCCCCCeEEEEcCCchhHHHHHHhCCCcCeEE
Q 015031 76 GHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVS 155 (414)
Q Consensus 76 ~~i~p~n~P~~~~~~~~~~ALaaGN~vv~kps~~~~~~~~~l~~~~~~aglp~g~v~~~~~~~~~~~~~l~~~~~~~~v~ 155 (414)
++|+|||||+...++++++||++||+||+|||+.+|.++..+.+++.++|+|+|+++++++++.+.+..|..||+++.|.
T Consensus 128 ~~I~P~N~P~~~~~~~~~~AL~aGN~vvlKps~~~p~~~~~l~~~~~~aglP~g~~~~v~g~~~~~~~~l~~~~~~~~v~ 207 (459)
T cd07089 128 AAITPWNFPFFLNLAKLAPALAAGNTVVLKPAPDTPLSALLLGEIIAETDLPAGVVNVVTGSDNAVGEALTTDPRVDMVS 207 (459)
T ss_pred EEEcCCchHHHHHHHHHHHHHHcCCEEEEECCCCChHHHHHHHHHHHHcCCCccceEEEecCcHHHHHHHhcCCCCCEEE
Confidence 99999999999999999999999999999999999999999999999999999999999997777899999999999999
Q ss_pred EeCCHHHHHHHHHHHhhCCCCceeeeCCCCCceeecCCCCHHHHHHHHHHHHhcccCCccccCcEEEEeCccHHHHHHHH
Q 015031 156 FTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKL 235 (414)
Q Consensus 156 ~tGs~~~~~~i~~~~~~~~~~~~~~e~gG~~~~iV~~dadl~~a~~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f~~~l 235 (414)
||||+.+|+.|.+.++ ++++|+++|+||+||+||++|||++.|++.+++++|+|+||.|+++++||||++++|+|+++|
T Consensus 208 ftGs~~~g~~v~~~aa-~~~~~~~lelgG~n~~iV~~dadl~~aa~~i~~~~~~~sGQ~C~a~~~v~V~~~v~~~f~~~l 286 (459)
T cd07089 208 FTGSTAVGRRIMAQAA-ATLKRVLLELGGKSANIVLDDADLAAAAPAAVGVCMHNAGQGCALTTRLLVPRSRYDEVVEAL 286 (459)
T ss_pred EECcHHHHHHHHHHHH-hcCCcEEEECCCCCeeEECCCCCHHHHHHHHHHHHHHhcCCcccCCeEEEEcHHHHHHHHHHH
Confidence 9999999999999987 788999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhccccCCCCCCCCCccccCCHHHHHHHHHHHHHhhhcCCeEeeCCcccC--CCCceeeeEEEEeCCCCCccccccc
Q 015031 236 VEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIG--KKGYYIEPTIFTNVTEDMLIAKNEI 313 (414)
Q Consensus 236 ~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~--~~g~~~~Ptvl~~~~~~~~~~~~E~ 313 (414)
+++++++++|+|.++++++||++++.+++++++++++++++|+++++||.... ..|+|++|||+.+++++|++++||+
T Consensus 287 ~~~~~~~~~g~p~~~~~~~gp~i~~~~~~~v~~~i~~a~~~Ga~~l~gg~~~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~ 366 (459)
T cd07089 287 AAAFEALPVGDPADPGTVMGPLISAAQRDRVEGYIARGRDEGARLVTGGGRPAGLDKGFYVEPTLFADVDNDMRIAQEEI 366 (459)
T ss_pred HHHHHhCCCCCCCCCCCCCCCCcCHHHHHHHHHHHHHHHHCCCEEEeCCCcCCCCCCCeEECCEEEEcCCCCCHHHhCCC
Confidence 99999999999999999999999999999999999999999999999997643 3689999999999999999999999
Q ss_pred ccceEEEeeeCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHHhccceeEEEECCcCCCCCCCCccCCCCCCCCCcchHH
Q 015031 314 FGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSIRAGIIWINCYFAFDSDCPYGGYKMSGFGRDCGLE 393 (414)
Q Consensus 314 fgPvl~v~~~~~~~eai~~~n~~~~gl~~sv~s~d~~~~~~~~~~l~~g~v~vN~~~~~~~~~pfgG~~~sG~g~~~g~~ 393 (414)
||||++|++|+|+||||+++|+++|||++||||+|.+.++++++++++|+|+||+.....+.+||||+|.||+|+++|++
T Consensus 367 FgPvl~v~~~~~~deai~~~n~~~~gL~~~v~t~d~~~~~~~~~~~~~G~v~iN~~~~~~~~~PfgG~k~SG~G~~~g~~ 446 (459)
T cd07089 367 FGPVLVVIPYDDDDEAVRIANDSDYGLSGGVWSADVDRAYRVARRIRTGSVGINGGGGYGPDAPFGGYKQSGLGRENGIE 446 (459)
T ss_pred cCceEEEeccCCHHHHHHHHhCCCCCCeEEEEcCCHHHHHHHHHhcCcCeEEECCCCCCCCCCCcCCcccccCCCCchHH
Confidence 99999999999999999999999999999999999999999999999999999998877778899999999999999999
Q ss_pred HHHhhhcccEEE
Q 015031 394 SLHNYLQVKSVV 405 (414)
Q Consensus 394 ~~~~~~~~k~i~ 405 (414)
|+++||+.|+++
T Consensus 447 ~l~~ft~~k~v~ 458 (459)
T cd07089 447 GLEEFLETKSIA 458 (459)
T ss_pred HHHHhhceeEEe
Confidence 999999999985
|
The 6-oxolauric acid dehydrogenase (CddD) from Rhodococcus ruber SC1 which converts 6-oxolauric acid to dodecanedioic acid; and the aldehyde dehydrogenase (locus SSP0762) from Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 and also, the Mycobacterium tuberculosis H37Rv ALDH AldA (locus Rv0768) sequence; and other similar sequences, are included in this CD. |
| >cd07118 ALDH_SNDH Gluconobacter oxydans L-sorbosone dehydrogenase-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-86 Score=672.16 Aligned_cols=403 Identities=48% Similarity=0.820 Sum_probs=379.9
Q ss_pred CHHHHHHHHHhHHHHHHHHHHHcCCChHHHhhccHHHHHHHHHHHHHhhhhhcCceecc-ccCccccccccCCcEEEEEc
Q 015031 1 MLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKM-SRALQGYTLREPIGVVGHII 79 (414)
Q Consensus 1 L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~~~~~~~~~~~~-~~~~~~~~~~~P~Gvv~~i~ 79 (414)
|++++++|++|+++|++++++|+|||..++ ..|+..+++.+++++.+.+...+...+. ..+...+..++|+|||++|+
T Consensus 49 l~~~a~~l~~~~~~la~~~~~e~Gk~~~~a-~~ev~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GvV~~I~ 127 (454)
T cd07118 49 LLKVADLIRARRERLALIETLESGKPISQA-RGEIEGAADLWRYAASLARTLHGDSYNNLGDDMLGLVLREPIGVVGIIT 127 (454)
T ss_pred HHHHHHHHHHhHHHHHHHHHHHcCCCHHHH-HHHHHHHHHHHHHHHHHHHHhcCcccccCCCCceeeEEeecceEEEEEC
Confidence 578999999999999999999999999975 5799999999999998776655433321 22345678899999999999
Q ss_pred CCCcChHhhHHHHHHHHhcCCeEEEecCCCChhHHHHHHHHHHHcCCCCCeEEEEcCCchhHHHHHHhCCCcCeEEEeCC
Q 015031 80 PWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGS 159 (414)
Q Consensus 80 p~n~P~~~~~~~~~~ALaaGN~vv~kps~~~~~~~~~l~~~~~~aglp~g~v~~~~~~~~~~~~~l~~~~~~~~v~~tGs 159 (414)
|||||+...++++++||++||+||+|||+.+|.++..+.+++.++|+|+|+++++++++.+.++.|..|+++|.|.||||
T Consensus 128 p~N~P~~~~~~~i~~ALaaGN~Vi~Kps~~~p~~~~~l~~~~~~aG~P~g~~~~v~g~~~~~~~~L~~~~~v~~v~ftGs 207 (454)
T cd07118 128 PWNFPFLILSQKLPFALAAGCTVVVKPSEFTSGTTLMLAELLIEAGLPAGVVNIVTGYGATVGQAMTEHPDVDMVSFTGS 207 (454)
T ss_pred CCCcHHHHHHHHHHHHHhcCCEEEEECCCCCcHHHHHHHHHHHhcCCCccceEEEecCCchHHHHHhcCCCCCEEEEECc
Confidence 99999999999999999999999999999999999999999999999999999999977778999999999999999999
Q ss_pred HHHHHHHHHHHhhCCCCceeeeCCCCCceeecCCCCHHHHHHHHHHHHhcccCCccccCcEEEEeCccHHHHHHHHHHHH
Q 015031 160 TDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKA 239 (414)
Q Consensus 160 ~~~~~~i~~~~~~~~~~~~~~e~gG~~~~iV~~dadl~~a~~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f~~~l~~~~ 239 (414)
+++|+.|.+.++ ++++|+++|+||+||+||++|||++.|++.+++++|+|+||.|+++++||||++++|+|+++|++++
T Consensus 208 ~~~g~~i~~~aa-~~~~~~~lelgG~n~~iV~~dAdl~~aa~~i~~~~f~~~GQ~C~a~~rv~V~~~i~d~f~~~L~~~~ 286 (454)
T cd07118 208 TRVGKAIAAAAA-RNLKKVSLELGGKNPQIVFADADLDAAADAVVFGVYFNAGECCNSGSRLLVHESIADAFVAAVVARS 286 (454)
T ss_pred HHHHHHHHHHHH-hcCCcEEeccCCCCceEECCCCCHHHHHHHHHHHHHhccCCCCCCCceEEEcHHHHHHHHHHHHHHH
Confidence 999999999988 7889999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hccccCCCCCCCCCccccCCHHHHHHHHHHHHHhhhcCCeEeeCCcccC-CCCceeeeEEEEeCCCCCcccccccccceE
Q 015031 240 KAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIG-KKGYYIEPTIFTNVTEDMLIAKNEIFGPVM 318 (414)
Q Consensus 240 ~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~-~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl 318 (414)
+++++|+|.++++++||++++.+++++++++++++.+|+++++||.... ..|+|++|||+.+++++|++++||+||||+
T Consensus 287 ~~l~~g~p~~~~~~~gpli~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl 366 (454)
T cd07118 287 RKVRVGDPLDPETKVGAIINEAQLAKITDYVDAGRAEGATLLLGGERLASAAGLFYQPTIFTDVTPDMAIAREEIFGPVL 366 (454)
T ss_pred HhcCcCCCCCCCCcCCCCcCHHHHHHHHHHHHHHHhCCCEEEeCCCCCCCCCCeEEeCEEEeCCCCCCHHHhCCCCCceE
Confidence 9999999999999999999999999999999999999999999998754 368999999999999999999999999999
Q ss_pred EEeeeCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHHhccceeEEEECCcCCCCCCCCccCCCCCCCCCcchHHHHHhh
Q 015031 319 ALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSIRAGIIWINCYFAFDSDCPYGGYKMSGFGRDCGLESLHNY 398 (414)
Q Consensus 319 ~v~~~~~~~eai~~~n~~~~gl~~sv~s~d~~~~~~~~~~l~~g~v~vN~~~~~~~~~pfgG~~~sG~g~~~g~~~~~~~ 398 (414)
+|++|+|+||||+++|++++||++||||+|.+.++++++++++|.|+||++....+.+||||+|.||+|+++|++++++|
T Consensus 367 ~v~~~~~~~eai~~~n~~~~gL~~~vft~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~PfgG~~~SG~G~~~g~~~l~~~ 446 (454)
T cd07118 367 SVLTFDTVDEAIALANDTVYGLSAGVWSKDIDTALTVARRIRAGTVWVNTFLDGSPELPFGGFKQSGIGRELGRYGVEEY 446 (454)
T ss_pred EEEEECCHHHHHHHHhCCCccceEEEECCCHHHHHHHHHhcCcCEEEECCCCCCCCCCCcCCcccccCCcCchHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999877778899999999999999999999999
Q ss_pred hcccEEE
Q 015031 399 LQVKSVV 405 (414)
Q Consensus 399 ~~~k~i~ 405 (414)
|++|+++
T Consensus 447 t~~k~~~ 453 (454)
T cd07118 447 TELKTVH 453 (454)
T ss_pred hceeEEe
Confidence 9999875
|
Included in this CD is the L-sorbosone dehydrogenase (SNDH) from Gluconobacter oxydans UV10. In G. oxydans, D-sorbitol is converted to 2-keto-L-gulonate (a precursor of L-ascorbic acid) in sequential oxidation steps catalyzed by a FAD-dependent, L-sorbose dehydrogenase and an NAD(P)+-dependent, L-sorbosone dehydrogenase. |
| >cd07151 ALDH_HBenzADH NADP+-dependent p-hydroxybenzaldehyde dehydrogenase-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-86 Score=673.73 Aligned_cols=402 Identities=39% Similarity=0.634 Sum_probs=377.5
Q ss_pred CHHHHHHHHHhHHHHHHHHHHHcCCChHHHhhccHHHHHHHHHHHHHhhhhhcCceeccc-cCccccccccCCcEEEEEc
Q 015031 1 MLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMS-RALQGYTLREPIGVVGHII 79 (414)
Q Consensus 1 L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~-~~~~~~~~~~P~Gvv~~i~ 79 (414)
|+++++.|++|+++|++++++|+|||..++ ..|+..+++.+++++...++..+...+.. .+...+.+++|+|||++|+
T Consensus 60 L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a-~~Ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~I~ 138 (465)
T cd07151 60 LEKAAQILEERRDEIVEWLIRESGSTRIKA-NIEWGAAMAITREAATFPLRMEGRILPSDVPGKENRVYREPLGVVGVIS 138 (465)
T ss_pred HHHHHHHHHHhHHHHHHHHHHHcCCCHHHH-HHHHHHHHHHHHHHHHhHHHhcCccccCCCCCceeEEEEecceEEEEEC
Confidence 578999999999999999999999999975 46999999999999987766544433321 3555778899999999999
Q ss_pred CCCcChHhhHHHHHHHHhcCCeEEEecCCCChhHH-HHHHHHHHHcCCCCCeEEEEcCCchhHHHHHHhCCCcCeEEEeC
Q 015031 80 PWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIA-LYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTG 158 (414)
Q Consensus 80 p~n~P~~~~~~~~~~ALaaGN~vv~kps~~~~~~~-~~l~~~~~~aglp~g~v~~~~~~~~~~~~~l~~~~~~~~v~~tG 158 (414)
|||||++..++++++||++||+||+|||+.+|.++ ..+.+++.++|+|+|++|++++++.+.+..|+.||.++.|.|||
T Consensus 139 p~N~P~~~~~~~~~~ALaaGN~Vi~Kps~~~p~~~~~~l~~~l~~aG~P~gvv~~v~g~~~~~~~~l~~~~~v~~v~fTG 218 (465)
T cd07151 139 PWNFPLHLSMRSVAPALALGNAVVLKPASDTPITGGLLLAKIFEEAGLPKGVLNVVVGAGSEIGDAFVEHPVPRLISFTG 218 (465)
T ss_pred CCChHHHHHHHHHHHHHHcCCEEEEECCCCCcHhHHHHHHHHHHHcCcCccceEEEecCchhhHHHHhcCCCCCEEEEEC
Confidence 99999999999999999999999999999999996 78999999999999999999987778899999999999999999
Q ss_pred CHHHHHHHHHHHhhCCCCceeeeCCCCCceeecCCCCHHHHHHHHHHHHhcccCCccccCcEEEEeCccHHHHHHHHHHH
Q 015031 159 STDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEK 238 (414)
Q Consensus 159 s~~~~~~i~~~~~~~~~~~~~~e~gG~~~~iV~~dadl~~a~~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f~~~l~~~ 238 (414)
|+.+|+.|.+.++ ++++|+++|+|||||+||++|||++.|++.+++++|.|+||.|+++++||||+++||+|+++|+++
T Consensus 219 s~~~g~~i~~~aa-~~~~~~~lElGGk~p~iV~~daDl~~Aa~~i~~~~f~~~GQ~C~a~~rv~V~~~i~~~f~~~l~~~ 297 (465)
T cd07151 219 STPVGRHIGELAG-RHLKKVALELGGNNPFVVLEDADIDAAVNAAVFGKFLHQGQICMAINRIIVHEDVYDEFVEKFVER 297 (465)
T ss_pred CHHHHHHHHHHHH-hcCCcEEEECCCCCeEEECCCCCHHHHHHHHHHHHHhcCCCCCcCCcEEEEeHHHHHHHHHHHHHH
Confidence 9999999999988 789999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhccccCCCCCCCCCccccCCHHHHHHHHHHHHHhhhcCCeEeeCCcccCCCCceeeeEEEEeCCCCCcccccccccceE
Q 015031 239 AKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIGKKGYYIEPTIFTNVTEDMLIAKNEIFGPVM 318 (414)
Q Consensus 239 ~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl 318 (414)
++++++|+|.++++.+||++++.+++++++++++++++|+++++||.. +|+|++|||+.+++++|++++||+||||+
T Consensus 298 ~~~~~~g~p~~~~~~~gpli~~~~~~~v~~~v~~a~~~ga~vl~gg~~---~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl 374 (465)
T cd07151 298 VKALPYGDPSDPDTVVGPLINESQVDGLLDKIEQAVEEGATLLVGGEA---EGNVLEPTVLSDVTNDMEIAREEIFGPVA 374 (465)
T ss_pred HHhCCCCCCCCCCCCcCCCcCHHHHHHHHHHHHHHHhCCCEEEecCCc---CCEEEccEEEeCCCCCCchhhCcCcCCeE
Confidence 999999999999999999999999999999999999999999999964 68999999999999999999999999999
Q ss_pred EEeeeCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHHhccceeEEEECCcCCC-CCCCCccCCCCCCCCCcchHHHHHh
Q 015031 319 ALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSIRAGIIWINCYFAF-DSDCPYGGYKMSGFGRDCGLESLHN 397 (414)
Q Consensus 319 ~v~~~~~~~eai~~~n~~~~gl~~sv~s~d~~~~~~~~~~l~~g~v~vN~~~~~-~~~~pfgG~~~sG~g~~~g~~~~~~ 397 (414)
+|++|+|.||||+++|+++|||++||||+|.+.++++++++++|+|+||+.+.. .+.+||||+|.||+|+++|++++++
T Consensus 375 ~v~~~~~~~eai~~~n~~~~gL~a~v~t~d~~~a~~~~~~l~~G~v~iN~~~~~~~~~~PfGG~k~SG~G~~~g~~~l~~ 454 (465)
T cd07151 375 PIIKADDEEEALELANDTEYGLSGAVFTSDLERGVQFARRIDAGMTHINDQPVNDEPHVPFGGEKNSGLGRFNGEWALEE 454 (465)
T ss_pred EEEeeCCHHHHHHHHhCCCccceEEEECCCHHHHHHHHHhCCcCeEEECCCCCCCCCCCCCCCcccccCCcCChHHHHHH
Confidence 999999999999999999999999999999999999999999999999998754 3678999999999999999999999
Q ss_pred hhcccEEEEe
Q 015031 398 YLQVKSVVTP 407 (414)
Q Consensus 398 ~~~~k~i~~~ 407 (414)
|++.|+++++
T Consensus 455 ~t~~k~~~~~ 464 (465)
T cd07151 455 FTTDKWISVQ 464 (465)
T ss_pred hhceEEEEec
Confidence 9999998763
|
NADP+-dependent, p-hydroxybenzaldehyde dehydrogenase (PchA, HBenzADH) which catalyzes oxidation of p-hydroxybenzaldehyde to p-hydroxybenzoic acid and other related sequences are included in this CD. |
| >cd07112 ALDH_GABALDH-PuuC Escherichia coli NADP+-dependent gamma-glutamyl-gamma-aminobutyraldehyde dehydrogenase PuuC-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-86 Score=673.98 Aligned_cols=405 Identities=51% Similarity=0.866 Sum_probs=380.8
Q ss_pred CHHHHHHHHHhHHHHHHHHHHHcCCChHHHhhccHHHHHHHHHHHHHhhhhhcCceeccccCccccccccCCcEEEEEcC
Q 015031 1 MLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMSRALQGYTLREPIGVVGHIIP 80 (414)
Q Consensus 1 L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p 80 (414)
|+++++.|++|+++|++++++|+|||..++...|+..+++.+++++..+++..+...+...+...+.+++|+|||++|+|
T Consensus 54 L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GvV~~i~p 133 (462)
T cd07112 54 LLRLADLIEAHRDELALLETLDMGKPISDALAVDVPSAANTFRWYAEAIDKVYGEVAPTGPDALALITREPLGVVGAVVP 133 (462)
T ss_pred HHHHHHHHHHhHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHHHHHHHHHhcCceecCCCCeEEEEEEeeeeeEEEECC
Confidence 57899999999999999999999999997655699999999999999887665543332234456789999999999999
Q ss_pred CCcChHhhHHHHHHHHhcCCeEEEecCCCChhHHHHHHHHHHHcCCCCCeEEEEcCCchhHHHHHHhCCCcCeEEEeCCH
Q 015031 81 WNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGST 160 (414)
Q Consensus 81 ~n~P~~~~~~~~~~ALaaGN~vv~kps~~~~~~~~~l~~~~~~aglp~g~v~~~~~~~~~~~~~l~~~~~~~~v~~tGs~ 160 (414)
||||+...++++++||++||+||+|||+.+|.++..+.+++.++|+|+|+++++++++.+.++.|+.|+++|.|.||||+
T Consensus 134 ~N~P~~~~~~~~~~ALaaGN~Vv~Kps~~~p~~~~~l~~~~~~aGlP~g~v~~v~g~~~~~~~~l~~~~~v~~V~fTGs~ 213 (462)
T cd07112 134 WNFPLLMAAWKIAPALAAGNSVVLKPAEQSPLTALRLAELALEAGLPAGVLNVVPGFGHTAGEALGLHMDVDALAFTGST 213 (462)
T ss_pred CchHHHHHHHHHHHHHHcCCeeeeeCCCCCCHHHHHHHHHHHhcCCCCCcEEEEeCCCchHHHHHhcCCCcCEEEEECCH
Confidence 99999999999999999999999999999999999999999999999999999999777889999999999999999999
Q ss_pred HHHHHHHHHHhhCCCCceeeeCCCCCceeecCCC-CHHHHHHHHHHHHhcccCCccccCcEEEEeCccHHHHHHHHHHHH
Q 015031 161 DVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDV-DVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKA 239 (414)
Q Consensus 161 ~~~~~i~~~~~~~~~~~~~~e~gG~~~~iV~~da-dl~~a~~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f~~~l~~~~ 239 (414)
++|+.|.+.++.++++|+++|+||+||+||++|+ |++.|++.+++++|.|+||.|+++++||||++++|+|+++|++++
T Consensus 214 ~~g~~i~~~aa~~~~~~~~lelgG~n~~iV~~da~dl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~v~~~f~~~l~~~~ 293 (462)
T cd07112 214 EVGRRFLEYSGQSNLKRVWLECGGKSPNIVFADAPDLDAAAEAAAAGIFWNQGEVCSAGSRLLVHESIKDEFLEKVVAAA 293 (462)
T ss_pred HHHHHHHHHHHHhcCCEEEecCCCCCeEEECCCCcCHHHHHHHHHHHHHhccCCCCCCCeeEEEcHHHHHHHHHHHHHHH
Confidence 9999999988744789999999999999999999 999999999999999999999999999999999999999999999
Q ss_pred hccccCCCCCCCCCccccCCHHHHHHHHHHHHHhhhcCCeEeeCCcccC--CCCceeeeEEEEeCCCCCcccccccccce
Q 015031 240 KAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIG--KKGYYIEPTIFTNVTEDMLIAKNEIFGPV 317 (414)
Q Consensus 240 ~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~--~~g~~~~Ptvl~~~~~~~~~~~~E~fgPv 317 (414)
+++++|+|.++++++||++++.+++++++++++++++|+++++||.... ..|+|++|||+.+++++|++++||+||||
T Consensus 294 ~~~~~g~p~~~~~~~gpli~~~~~~~v~~~v~~a~~~Ga~v~~gg~~~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~fgPv 373 (462)
T cd07112 294 REWKPGDPLDPATRMGALVSEAHFDKVLGYIESGKAEGARLVAGGKRVLTETGGFFVEPTVFDGVTPDMRIAREEIFGPV 373 (462)
T ss_pred hcCCcCCCCCCCCCCCCCcCHHHHHHHHHHHHHHHHCCCEEEeCCccCCCCCCCeEEeeEEecCCCCCChHHhCCCCCce
Confidence 9999999999999999999999999999999999999999999997542 25889999999999999999999999999
Q ss_pred EEEeeeCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHHhccceeEEEECCcCCCCCCCCccCCCCCCCCCcchHHHHHh
Q 015031 318 MALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSIRAGIIWINCYFAFDSDCPYGGYKMSGFGRDCGLESLHN 397 (414)
Q Consensus 318 l~v~~~~~~~eai~~~n~~~~gl~~sv~s~d~~~~~~~~~~l~~g~v~vN~~~~~~~~~pfgG~~~sG~g~~~g~~~~~~ 397 (414)
++|++|+|.||||+++|+++|||++||||+|.+.+.++++++++|+|+||+++...+.+||||+|.||+|+++|.+++++
T Consensus 374 l~v~~~~~~~eai~~~n~~~~gL~~~i~t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~PfgG~k~SG~G~~~g~~~~~~ 453 (462)
T cd07112 374 LSVITFDSEEEAVALANDSVYGLAASVWTSDLSRAHRVARRLRAGTVWVNCFDEGDITTPFGGFKQSGNGRDKSLHALDK 453 (462)
T ss_pred EEEEEeCCHHHHHHHHhCCCccceEEEEcCCHHHHHHHHHhcCcceEEECCCCCCCCCCCCCCcccccCCccchHHHHHH
Confidence 99999999999999999999999999999999999999999999999999987777789999999999999999999999
Q ss_pred hhcccEEE
Q 015031 398 YLQVKSVV 405 (414)
Q Consensus 398 ~~~~k~i~ 405 (414)
|+++|+++
T Consensus 454 f~~~k~i~ 461 (462)
T cd07112 454 YTELKTTW 461 (462)
T ss_pred HhceeEEE
Confidence 99999885
|
NADP+-dependent, gamma-glutamyl-gamma-aminobutyraldehyde dehydrogenase (GABALDH) PuuC of Escherichia coli which catalyzes the conversion of putrescine to 4-aminobutanoate and other similar sequences are present in this CD. |
| >cd07090 ALDH_F9_TMBADH NAD+-dependent 4-trimethylaminobutyraldehyde dehydrogenase, ALDH family 9A1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-86 Score=672.80 Aligned_cols=405 Identities=44% Similarity=0.779 Sum_probs=381.7
Q ss_pred CHHHHHHHHHhHHHHHHHHHHHcCCChHHHhhccHHHHHHHHHHHHHhhhhhcCceeccccCccccccccCCcEEEEEcC
Q 015031 1 MLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMSRALQGYTLREPIGVVGHIIP 80 (414)
Q Consensus 1 L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p 80 (414)
|+++++.|++++++|++++++|+||+..++ ..|+..+++.+++++++.++..+...+...+...+.+++|+|||++|+|
T Consensus 47 L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a-~~ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVV~~I~p 125 (457)
T cd07090 47 LRKAADLLRERNDEIARLETIDNGKPIEEA-RVDIDSSADCLEYYAGLAPTLSGEHVPLPGGSFAYTRREPLGVCAGIGA 125 (457)
T ss_pred HHHHHHHHHHhHHHHHHHHHHHcCCCHHHH-HHHHHHHHHHHHHHHHHHHHhCCeeeccCCCceEEEEEeecceEEEECC
Confidence 578999999999999999999999999864 6799999999999998887765554443345667889999999999999
Q ss_pred CCcChHhhHHHHHHHHhcCCeEEEecCCCChhHHHHHHHHHHHcCCCCCeEEEEcCCchhHHHHHHhCCCcCeEEEeCCH
Q 015031 81 WNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGST 160 (414)
Q Consensus 81 ~n~P~~~~~~~~~~ALaaGN~vv~kps~~~~~~~~~l~~~~~~aglp~g~v~~~~~~~~~~~~~l~~~~~~~~v~~tGs~ 160 (414)
||||+...++++++||++||+||+|||+.+|.++..+.+++.++|+|+|++|++++++ +.++.|+.|+++|.|.||||+
T Consensus 126 ~N~P~~~~~~~~~~ALaaGN~Vv~Kps~~~~~~~~~l~~~~~~aGlP~g~~~~v~g~~-~~~~~l~~~~~v~~v~fTGs~ 204 (457)
T cd07090 126 WNYPIQIASWKSAPALACGNAMVYKPSPFTPLTALLLAEILTEAGLPDGVFNVVQGGG-ETGQLLCEHPDVAKVSFTGSV 204 (457)
T ss_pred CccHHHHHHHHHHHHHhcCCeeeecCCCcCcHHHHHHHHHHHHcCCCcccEEEEeCCh-hhHHHHhcCCCCCEEEEECcH
Confidence 9999999999999999999999999999999999999999999999999999999854 688999999999999999999
Q ss_pred HHHHHHHHHHhhCCCCceeeeCCCCCceeecCCCCHHHHHHHHHHHHhcccCCccccCcEEEEeCccHHHHHHHHHHHHh
Q 015031 161 DVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAK 240 (414)
Q Consensus 161 ~~~~~i~~~~~~~~~~~~~~e~gG~~~~iV~~dadl~~a~~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f~~~l~~~~~ 240 (414)
.+|+.|.+.++ +.++|+++|+|||||+||++|||++.|++.+++++|.|+||.|+++++||||++++|+|+++|+++++
T Consensus 205 ~~g~~i~~~aa-~~~~~~~lelgG~~p~iV~~dAdl~~Aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~ 283 (457)
T cd07090 205 PTGKKVMSAAA-KGIKHVTLELGGKSPLIIFDDADLENAVNGAMMANFLSQGQVCSNGTRVFVQRSIKDEFTERLVERTK 283 (457)
T ss_pred HHHHHHHHHHh-ccCCceEEecCCCCceEECCCCCHHHHHHHHHHHHHhcCCCCCCCCeEEEEcHHHHHHHHHHHHHHHH
Confidence 99999999987 78999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccCCCCCCCCCccccCCHHHHHHHHHHHHHhhhcCCeEeeCCcccC-----CCCceeeeEEEEeCCCCCccccccccc
Q 015031 241 AWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIG-----KKGYYIEPTIFTNVTEDMLIAKNEIFG 315 (414)
Q Consensus 241 ~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~-----~~g~~~~Ptvl~~~~~~~~~~~~E~fg 315 (414)
++++|+|.++++++||+++.++++++++++++++++|+++++||.... ++|+|++|||+.+++++|+++++|+||
T Consensus 284 ~~~~g~p~~~~~~~gpli~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~Fg 363 (457)
T cd07090 284 KIRIGDPLDEDTQMGALISEEHLEKVLGYIESAKQEGAKVLCGGERVVPEDGLENGFYVSPCVLTDCTDDMTIVREEIFG 363 (457)
T ss_pred hcCCCCCCCCCCCcccccCHHHHHHHHHHHHHHHHCCCEEEECCCcCcccccCCCCeeECCEEEecCCCCChHHhCCCCC
Confidence 999999999999999999999999999999999999999999997632 358999999999999999999999999
Q ss_pred ceEEEeeeCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHHhccceeEEEECCcCCCCCCCCccCCCCCCCCCcchHHHH
Q 015031 316 PVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSIRAGIIWINCYFAFDSDCPYGGYKMSGFGRDCGLESL 395 (414)
Q Consensus 316 Pvl~v~~~~~~~eai~~~n~~~~gl~~sv~s~d~~~~~~~~~~l~~g~v~vN~~~~~~~~~pfgG~~~sG~g~~~g~~~~ 395 (414)
||++|++|+|.||||+++|+++|||++||||+|.+.++++++++++|.|+||+.....+.+||||+|.||+|+++|.+++
T Consensus 364 Pvl~v~~~~~~deai~~~n~~~~gLsa~i~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~pfGG~k~SG~G~~~g~~~~ 443 (457)
T cd07090 364 PVMSILPFDTEEEVIRRANDTTYGLAAGVFTRDLQRAHRVIAQLQAGTCWINTYNISPVEVPFGGYKQSGFGRENGTAAL 443 (457)
T ss_pred CeEEEEEECCHHHHHHHHhCCCcCceEEEEcCCHHHHHHHHHhCCcCeEEECCCCCCCCCCCcCCCccCcCCccchHHHH
Confidence 99999999999999999999999999999999999999999999999999999877777899999999999999999999
Q ss_pred HhhhcccEEEEeC
Q 015031 396 HNYLQVKSVVTPI 408 (414)
Q Consensus 396 ~~~~~~k~i~~~~ 408 (414)
++||+.|+++++.
T Consensus 444 ~~f~~~k~~~~~~ 456 (457)
T cd07090 444 EHYTQLKTVYVEM 456 (457)
T ss_pred HHHhCeEEEEEeC
Confidence 9999999997754
|
NAD+-dependent, 4-trimethylaminobutyraldehyde dehydrogenase (TMABADH, EC=1.2.1.47), also known as aldehyde dehydrogenase family 9 member A1 (ALDH9A1) in humans, is a cytosolic tetramer which catalyzes the oxidation of gamma-aminobutyraldehyde involved in 4-aminobutyric acid (GABA) biosynthesis and also oxidizes betaine aldehyde (gamma-trimethylaminobutyraldehyde) which is involved in carnitine biosynthesis. |
| >cd07085 ALDH_F6_MMSDH Methylmalonate semialdehyde dehydrogenase and ALDH family members 6A1 and 6B2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.3e-86 Score=674.98 Aligned_cols=404 Identities=37% Similarity=0.549 Sum_probs=376.3
Q ss_pred CHHHHHHHHHhHHHHHHHHHHHcCCChHHHhhccHHHHHHHHHHHHHhhhhhcCceecc-ccCccccccccCCcEEEEEc
Q 015031 1 MLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKM-SRALQGYTLREPIGVVGHII 79 (414)
Q Consensus 1 L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~~~~~~~~~~~~-~~~~~~~~~~~P~Gvv~~i~ 79 (414)
|+++++.|++|+++|++++++|+|||..++ ..|+..+++.+++++...+...++..+. ..+...+.+++|+|||++|+
T Consensus 66 L~~~a~~l~~~~~el~~~~~~e~Gk~~~~a-~~ev~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~P~GVv~~I~ 144 (478)
T cd07085 66 MFKFRQLLEENLDELARLITLEHGKTLADA-RGDVLRGLEVVEFACSIPHLLKGEYLENVARGIDTYSYRQPLGVVAGIT 144 (478)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHcCCCHHHH-HHHHHHHHHHHHHHHHHHHHhCCeecccCCCCceeEEEEecceEEEEEC
Confidence 578999999999999999999999999975 5799999999999987766554443322 12445689999999999999
Q ss_pred CCCcChHhhHHHHHHHHhcCCeEEEecCCCChhHHHHHHHHHHHcCCCCCeEEEEcCCchhHHHHHHhCCCcCeEEEeCC
Q 015031 80 PWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGS 159 (414)
Q Consensus 80 p~n~P~~~~~~~~~~ALaaGN~vv~kps~~~~~~~~~l~~~~~~aglp~g~v~~~~~~~~~~~~~l~~~~~~~~v~~tGs 159 (414)
|||||+...++++++||++||+||+|||+.+|.++..+.+++.++|+|+|++|++++ +.+.+..|+.||++|.|.||||
T Consensus 145 p~N~P~~~~~~~i~~ALaaGN~VvlKps~~tp~~~~~l~~~l~~aGlP~gvv~~v~g-~~~~~~~L~~~~~v~~V~fTGs 223 (478)
T cd07085 145 PFNFPAMIPLWMFPMAIACGNTFVLKPSERVPGAAMRLAELLQEAGLPDGVLNVVHG-GKEAVNALLDHPDIKAVSFVGS 223 (478)
T ss_pred CCChHHHHHHHHHHHHHhcCCEEEEECCCcCcHHHHHHHHHHHHhCCCCCcEEEEec-CHHHHHHHhcCCCcCEEEEECC
Confidence 999999999999999999999999999999999999999999999999999999998 4567899999999999999999
Q ss_pred HHHHHHHHHHHhhCCCCceeeeCCCCCceeecCCCCHHHHHHHHHHHHhcccCCccccCcEEEEeCccHHHHHHHHHHHH
Q 015031 160 TDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKA 239 (414)
Q Consensus 160 ~~~~~~i~~~~~~~~~~~~~~e~gG~~~~iV~~dadl~~a~~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f~~~l~~~~ 239 (414)
+.+|+.|.+.++ ++++|+++|+|||||+||++|||++.|++.+++++|.|+||.|+++++||||++++|+|+++|++++
T Consensus 224 ~~~g~~i~~~aa-~~~~~~~lElgGk~p~iV~~dADl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~~~f~~~L~~~~ 302 (478)
T cd07085 224 TPVGEYIYERAA-ANGKRVQALGGAKNHAVVMPDADLEQTANALVGAAFGAAGQRCMALSVAVAVGDEADEWIPKLVERA 302 (478)
T ss_pred HHHHHHHHHHHh-hcCCcEEecCCCCCceEECCCCCHHHHHHHHHHHHHhcCCCCCCCCeEEEEeHHHHHHHHHHHHHHH
Confidence 999999999887 7899999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hccccCCCCCCCCCccccCCHHHHHHHHHHHHHhhhcCCeEeeCCcccC----CCCceeeeEEEEeCCCCCccccccccc
Q 015031 240 KAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIG----KKGYYIEPTIFTNVTEDMLIAKNEIFG 315 (414)
Q Consensus 240 ~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~----~~g~~~~Ptvl~~~~~~~~~~~~E~fg 315 (414)
+++++|+|.++++++||++++.+++++++++++++++|+++++||.... ++|+|++|||+.+++++|+++++|+||
T Consensus 303 ~~l~~G~p~~~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~~l~gg~~~~~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~Fg 382 (478)
T cd07085 303 KKLKVGAGDDPGADMGPVISPAAKERIEGLIESGVEEGAKLVLDGRGVKVPGYENGNFVGPTILDNVTPDMKIYKEEIFG 382 (478)
T ss_pred HhCCCCCCCCCCCCcCCCcCHHHHHHHHHHHHHHHHCCCEEEeCCCcCCCCcCCCCeEEcCEEEecCCCCChhhhCcCcC
Confidence 9999999999999999999999999999999999999999999997532 368999999999999999999999999
Q ss_pred ceEEEeeeCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHHhccceeEEEECCcCCC-CCCCCccCCCCCCCCC--cchH
Q 015031 316 PVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSIRAGIIWINCYFAF-DSDCPYGGYKMSGFGR--DCGL 392 (414)
Q Consensus 316 Pvl~v~~~~~~~eai~~~n~~~~gl~~sv~s~d~~~~~~~~~~l~~g~v~vN~~~~~-~~~~pfgG~~~sG~g~--~~g~ 392 (414)
||++|++|+|+||||+++|+++|||++||||+|.+.++++++++++|.|+||++... .+.+||||+|.||+|+ ++|.
T Consensus 383 Pvl~v~~~~~~deai~~~N~~~~gL~a~v~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~~PfgG~k~SG~G~~~~~g~ 462 (478)
T cd07085 383 PVLSIVRVDTLDEAIAIINANPYGNGAAIFTRSGAAARKFQREVDAGMVGINVPIPVPLAFFSFGGWKGSFFGDLHFYGK 462 (478)
T ss_pred CeEEEEEeCCHHHHHHHHhCCCCCceEEEECCCHHHHHHHHHhCCcceEEEcCCCCCCCCCCCCCCcccccCCCCcCChH
Confidence 999999999999999999999999999999999999999999999999999987543 3678999999999994 7899
Q ss_pred HHHHhhhcccEEEEe
Q 015031 393 ESLHNYLQVKSVVTP 407 (414)
Q Consensus 393 ~~~~~~~~~k~i~~~ 407 (414)
+++++||++|+++.+
T Consensus 463 ~~~~~~~~~k~v~~~ 477 (478)
T cd07085 463 DGVRFYTQTKTVTSR 477 (478)
T ss_pred HHHHHhcceEEEEEe
Confidence 999999999999765
|
Methylmalonate semialdehyde dehydrogenase (MMSDH, EC=1.2.1.27) [acylating] from Bacillus subtilis is involved in valine metabolism and catalyses the NAD+- and CoA-dependent oxidation of methylmalonate semialdehyde into propionyl-CoA. Mitochondrial human MMSDH ALDH6A1 and Arabidopsis MMSDH ALDH6B2 are also present in this CD. |
| >cd07145 ALDH_LactADH_F420-Bios Methanocaldococcus jannaschii NAD+-dependent lactaldehyde dehydrogenase-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-86 Score=673.23 Aligned_cols=401 Identities=38% Similarity=0.656 Sum_probs=376.4
Q ss_pred CHHHHHHHHHhHHHHHHHHHHHcCCChHHHhhccHHHHHHHHHHHHHhhhhhcCceecccc-----CccccccccCCcEE
Q 015031 1 MLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMSR-----ALQGYTLREPIGVV 75 (414)
Q Consensus 1 L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~P~Gvv 75 (414)
|+++++.|++|+++|++++++|+|||..++ ..|+..+++.++++++.++...+...+.+. +...+.+++|+|||
T Consensus 49 L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a-~~ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv 127 (456)
T cd07145 49 LMKVAELIERRKEELAKLLTIEVGKPIKQS-RVEVERTIRLFKLAAEEAKVLRGETIPVDAYEYNERRIAFTVREPIGVV 127 (456)
T ss_pred HHHHHHHHHHhHHHHHHHHHHhcCCCHHHH-HHHHHHHHHHHHHHHHHHHHhcCccccCccccccCCceeEEEEecceeE
Confidence 578999999999999999999999999976 469999999999999877655544322221 23456789999999
Q ss_pred EEEcCCCcChHhhHHHHHHHHhcCCeEEEecCCCChhHHHHHHHHHHHcCCCCCeEEEEcCCchhHHHHHHhCCCcCeEE
Q 015031 76 GHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVS 155 (414)
Q Consensus 76 ~~i~p~n~P~~~~~~~~~~ALaaGN~vv~kps~~~~~~~~~l~~~~~~aglp~g~v~~~~~~~~~~~~~l~~~~~~~~v~ 155 (414)
++|+|||||+...++++++||++||+||+|||+.+|.++..+.+++.++|+|+|+++++++++.+.++.|+.||+++.|.
T Consensus 128 ~~I~p~N~P~~~~~~~~~~ALaaGN~VV~Kps~~~p~~~~~l~~~~~~ag~p~g~~~~v~g~~~~~~~~l~~~~~v~~V~ 207 (456)
T cd07145 128 GAITPFNFPANLFAHKIAPAIAVGNSVVVKPSSNTPLTAIELAKILEEAGLPPGVINVVTGYGSEVGDEIVTNPKVNMIS 207 (456)
T ss_pred EEECCCChHHHHHHHHHHHHHHcCCEEEEECCccchHHHHHHHHHHHHcCCCcccEEEEeCCCchHHHHHhcCCCCCEEE
Confidence 99999999999999999999999999999999999999999999999999999999999997778899999999999999
Q ss_pred EeCCHHHHHHHHHHHhhCCCCceeeeCCCCCceeecCCCCHHHHHHHHHHHHhcccCCccccCcEEEEeCccHHHHHHHH
Q 015031 156 FTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKL 235 (414)
Q Consensus 156 ~tGs~~~~~~i~~~~~~~~~~~~~~e~gG~~~~iV~~dadl~~a~~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f~~~l 235 (414)
||||+.+|+.|.+.++ ++++|+++|+|||||+||++|||++.|++.+++++|.|+||.|+++++||||++++|+|+++|
T Consensus 208 fTGs~~~g~~i~~~aa-~~~~~v~lElgG~n~~iV~~dAdl~~aa~~i~~~~f~~~GQ~C~a~~rv~V~~~i~d~f~~~l 286 (456)
T cd07145 208 FTGSTAVGLLIASKAG-GTGKKVALELGGSDPMIVLKDADLERAVSIAVRGRFENAGQVCNAVKRILVEEEVYDKFLKLL 286 (456)
T ss_pred EECCHHHHHHHHHHHh-hcCCceEEecCCCCeeEECCCCCHHHHHHHHHHHHHhccCCCCccCeeEEEcHHHHHHHHHHH
Confidence 9999999999999988 889999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhccccCCCCCCCCCccccCCHHHHHHHHHHHHHhhhcCCeEeeCCcccCCCCceeeeEEEEeCCCCCccccccccc
Q 015031 236 VEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIGKKGYYIEPTIFTNVTEDMLIAKNEIFG 315 (414)
Q Consensus 236 ~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fg 315 (414)
+++++++++|+|.++++++||++++.+++++++++++++++|+++++||..+ .|+|++|||+.+++++|++++||+||
T Consensus 287 ~~~~~~~~~g~p~~~~~~~gpli~~~~~~~~~~~i~~a~~~ga~vl~gg~~~--~g~~~~Ptvl~~~~~~~~i~~~E~fg 364 (456)
T cd07145 287 VEKVKKLKVGDPLDESTDLGPLISPEAVERMENLVNDAVEKGGKILYGGKRD--EGSFFPPTVLENDTPDMIVMKEEVFG 364 (456)
T ss_pred HHHHhcCCcCCCCCCCCCcCCCcCHHHHHHHHHHHHHHHHCCCEEEeCCCCC--CCeEECCEeecCCCCCChHhhCCCCC
Confidence 9999999999999999999999999999999999999999999999999764 38999999999999999999999999
Q ss_pred ceEEEeeeCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHHhccceeEEEECCcCCC-CCCCCccCCCCCCCCCcchHHH
Q 015031 316 PVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSIRAGIIWINCYFAF-DSDCPYGGYKMSGFGRDCGLES 394 (414)
Q Consensus 316 Pvl~v~~~~~~~eai~~~n~~~~gl~~sv~s~d~~~~~~~~~~l~~g~v~vN~~~~~-~~~~pfgG~~~sG~g~~~g~~~ 394 (414)
||++|++|+|+||||+++|++++||++||||+|.+.++++++++++|+|+||+.... .+.+||||+|.||+|+++|++|
T Consensus 365 Pvl~v~~~~~~~eai~~~n~~~~gL~~~v~t~d~~~~~~~~~~~~~g~v~vN~~~~~~~~~~pfgG~~~SG~G~~~g~~~ 444 (456)
T cd07145 365 PVLPIAKVKDDEEAVEIANSTEYGLQASVFTNDINRALKVARELEAGGVVINDSTRFRWDNLPFGGFKKSGIGREGVRYT 444 (456)
T ss_pred ceEEEEEECCHHHHHHHHhCCCCCceEEEECCCHHHHHHHHHhCCcceEEECCCCCCCCCCCCCCCcccccCCcCchHHH
Confidence 999999999999999999999999999999999999999999999999999987653 3578999999999999999999
Q ss_pred HHhhhcccEEE
Q 015031 395 LHNYLQVKSVV 405 (414)
Q Consensus 395 ~~~~~~~k~i~ 405 (414)
+++|++.|+++
T Consensus 445 l~~f~~~k~v~ 455 (456)
T cd07145 445 MLEMTEEKTIV 455 (456)
T ss_pred HHHhhceeEEe
Confidence 99999999885
|
NAD+-dependent, lactaldehyde dehydrogenase (EC=1.2.1.22) involved the biosynthesis of coenzyme F(420) in Methanocaldococcus jannaschii through the oxidation of lactaldehyde to lactate and generation of NAPH, and similar sequences are included in this CD. |
| >cd07116 ALDH_ACDHII-AcoD Ralstonia eutrophus NAD+-dependent acetaldehyde dehydrogenase II-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.7e-86 Score=674.11 Aligned_cols=403 Identities=44% Similarity=0.715 Sum_probs=375.3
Q ss_pred CHHHHHHHHHhHHHHHHHHHHHcCCChHHHhhccHHHHHHHHHHHHHhhhhhcCceeccccCccccccccCCcEEEEEcC
Q 015031 1 MLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMSRALQGYTLREPIGVVGHIIP 80 (414)
Q Consensus 1 L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p 80 (414)
|+++++.|++|+++|++++++|+|||..++...|+..+++.++++++.+++..+...+...+...+.+++|+|||++|+|
T Consensus 66 L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~P 145 (479)
T cd07116 66 LNKIADRMEANLEMLAVAETWDNGKPVRETLAADIPLAIDHFRYFAGCIRAQEGSISEIDENTVAYHFHEPLGVVGQIIP 145 (479)
T ss_pred HHHHHHHHHHhHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHhHHHcCCeeecCCCCceEEEEEeccceEEEECC
Confidence 57899999999999999999999999987655699999999999998876654443333334456789999999999999
Q ss_pred CCcChHhhHHHHHHHHhcCCeEEEecCCCChhHHHHHHHHHHHcCCCCCeEEEEcCCchhHHHHHHhCCCcCeEEEeCCH
Q 015031 81 WNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGST 160 (414)
Q Consensus 81 ~n~P~~~~~~~~~~ALaaGN~vv~kps~~~~~~~~~l~~~~~~aglp~g~v~~~~~~~~~~~~~l~~~~~~~~v~~tGs~ 160 (414)
||||+...++++++||++||+||+|||+.+|.++..+.+++.++ +|+|++|+++|++.+.+..|+.||++|.|.||||+
T Consensus 146 wN~P~~~~~~~~~~ALaaGN~VV~KPs~~tp~~~~~l~~l~~~a-lP~gvv~~v~g~~~~~~~~L~~~~~v~~V~fTGS~ 224 (479)
T cd07116 146 WNFPLLMATWKLAPALAAGNCVVLKPAEQTPASILVLMELIGDL-LPPGVVNVVNGFGLEAGKPLASSKRIAKVAFTGET 224 (479)
T ss_pred CchHHHHHHHHHHHHHHcCCEEEEECCCCChHHHHHHHHHHHHH-CCcCcEEEEecCchhHHHHHhcCCCcCEEEEECCH
Confidence 99999999999999999999999999999999999999999998 99999999999777889999999999999999999
Q ss_pred HHHHHHHHHHhhCCCCceeeeCCCCCceeecCC------CCHHHHHHHHHHHHhcccCCccccCcEEEEeCccHHHHHHH
Q 015031 161 DVGRQVMQAAATSNLKPVSLELGGKSPLLIFDD------VDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKK 234 (414)
Q Consensus 161 ~~~~~i~~~~~~~~~~~~~~e~gG~~~~iV~~d------adl~~a~~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f~~~ 234 (414)
++|+.|.+.++ ++++|+++|+|||||+||++| ||++.|++.++++. +|+||.|++++|||||++++|+|+++
T Consensus 225 ~~G~~i~~~aa-~~~~p~~lElGGk~p~iV~~da~~~~~adl~~A~~~i~~~~-~~~GQ~C~a~~rv~V~~~i~d~f~~~ 302 (479)
T cd07116 225 TTGRLIMQYAS-ENIIPVTLELGGKSPNIFFADVMDADDAFFDKALEGFVMFA-LNQGEVCTCPSRALIQESIYDRFMER 302 (479)
T ss_pred HHHHHHHHHHH-cCCCeEEEECCCCCeEEEecCcccccccCHHHHHHHHHHHH-hcCCCCCCCCeEEEEcHHHHHHHHHH
Confidence 99999999988 789999999999999999987 79999999999864 69999999999999999999999999
Q ss_pred HHHHHhccccCCCCCCCCCccccCCHHHHHHHHHHHHHhhhcCCeEeeCCcccC----CCCceeeeEEEEeCCCCCcccc
Q 015031 235 LVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIG----KKGYYIEPTIFTNVTEDMLIAK 310 (414)
Q Consensus 235 l~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~----~~g~~~~Ptvl~~~~~~~~~~~ 310 (414)
|+++++++++|+|.++++.+||++++.+++++++++++++++|+++++||.... .+|+|+.|||+.+++ +|++++
T Consensus 303 l~~~~~~l~~G~p~~~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~~~~gg~~~~~~~~~~g~~~~Ptvl~~~~-~~~~~~ 381 (479)
T cd07116 303 ALERVKAIKQGNPLDTETMIGAQASLEQLEKILSYIDIGKEEGAEVLTGGERNELGGLLGGGYYVPTTFKGGN-KMRIFQ 381 (479)
T ss_pred HHHHHHhcCCCCCCCCCCcCCCCCCHHHHHHHHHHHHHHHHCCCEEEeCCCcCCCCCCCCCeeecCeEEccCC-CChhhh
Confidence 999999999999999999999999999999999999999999999999997642 268999999998874 999999
Q ss_pred cccccceEEEeeeCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHHhccceeEEEECCcCCCCCCCCccCCCCCCCCCcc
Q 015031 311 NEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSIRAGIIWINCYFAFDSDCPYGGYKMSGFGRDC 390 (414)
Q Consensus 311 ~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~sv~s~d~~~~~~~~~~l~~g~v~vN~~~~~~~~~pfgG~~~sG~g~~~ 390 (414)
||+||||++|++|+|+||||+++|+++|||+++|||+|.+.++++++++++|.|+||++....+.+||||+|.||+|+++
T Consensus 382 eE~FGPVl~v~~~~~~~eai~~aN~~~~gLsa~v~t~d~~~a~~~~~~l~~G~v~iN~~~~~~~~~PfGG~k~SG~G~~~ 461 (479)
T cd07116 382 EEIFGPVLAVTTFKDEEEALEIANDTLYGLGAGVWTRDGNTAYRMGRGIQAGRVWTNCYHLYPAHAAFGGYKQSGIGREN 461 (479)
T ss_pred cCCcCceEEEEEeCCHHHHHHHHhCCcccceEEEEcCCHHHHHHHHHhcCcCeEEECCCCCCCCCCCcCCCccCcCCccC
Confidence 99999999999999999999999999999999999999999999999999999999988777778999999999999999
Q ss_pred hHHHHHhhhcccEEEEe
Q 015031 391 GLESLHNYLQVKSVVTP 407 (414)
Q Consensus 391 g~~~~~~~~~~k~i~~~ 407 (414)
|.+++++||++|+++++
T Consensus 462 g~~~l~~~~~~k~~~~~ 478 (479)
T cd07116 462 HKMMLDHYQQTKNLLVS 478 (479)
T ss_pred hHHHHHHhhceEEEEEe
Confidence 99999999999999764
|
Included in this CD is the NAD+-dependent, acetaldehyde dehydrogenase II (AcDHII, AcoD, EC=1.2.1.3) from Ralstonia (Alcaligenes) eutrophus H16 involved in the catabolism of acetoin and ethanol, and similar proteins, such as, the dimeric dihydrolipoamide dehydrogenase of the acetoin dehydrogenase enzyme system of Klebsiella pneumonia. Also included are sequences similar to the NAD+-dependent chloroacetaldehyde dehydrogenases (AldA and AldB) of Xanthobacter autotrophicus GJ10 which are involved in the degradation of 1,2-dichloroethane. These proteins apparently require RpoN factors for expression. |
| >cd07086 ALDH_F7_AASADH-like NAD+-dependent alpha-aminoadipic semialdehyde dehydrogenase and related proteins | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.3e-86 Score=673.37 Aligned_cols=405 Identities=32% Similarity=0.543 Sum_probs=379.0
Q ss_pred CHHHHHHHHHhHHHHHHHHHHHcCCChHHHhhccHHHHHHHHHHHHHhhhhhcCceeccc-cCccccccccCCcEEEEEc
Q 015031 1 MLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMS-RALQGYTLREPIGVVGHII 79 (414)
Q Consensus 1 L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~-~~~~~~~~~~P~Gvv~~i~ 79 (414)
|+++++.|++++++|++++++|+|||..++ ..|+..+++.+++++...++..+...+.. .+...+.+++|+|||++|+
T Consensus 63 L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a-~~ev~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~~P~GVv~~I~ 141 (478)
T cd07086 63 VRQIGEALRKKKEALGRLVSLEMGKILPEG-LGEVQEMIDICDYAVGLSRMLYGLTIPSERPGHRLMEQWNPLGVVGVIT 141 (478)
T ss_pred HHHHHHHHHHhHHHHHHHHHHhcCCCHHHH-HHHHHHHHHHHHHHHHHHHHhcCcccccCCCCceEEEEEecceeEEEEC
Confidence 578999999999999999999999999975 46999999999999988877655433321 2345678899999999999
Q ss_pred CCCcChHhhHHHHHHHHhcCCeEEEecCCCChhHHHHHHHHHHHc----CCCCCeEEEEcCCchhHHHHHHhCCCcCeEE
Q 015031 80 PWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLA----GVPDGVLNVVPGFGPTAGAAIASHMDIDKVS 155 (414)
Q Consensus 80 p~n~P~~~~~~~~~~ALaaGN~vv~kps~~~~~~~~~l~~~~~~a----glp~g~v~~~~~~~~~~~~~l~~~~~~~~v~ 155 (414)
|||||+...++++++||++||+||+|||+.+|.++..+.+++.++ |+|+|+++++++++. .+..|..||++|.|.
T Consensus 142 pwN~P~~~~~~~~~~ALaaGN~VIlKps~~~p~~~~~l~~~~~~al~~~glP~gvv~~v~g~~~-~~~~L~~~~~vd~v~ 220 (478)
T cd07086 142 AFNFPVAVPGWNAAIALVCGNTVVWKPSETTPLTAIAVTKILAEVLEKNGLPPGVVNLVTGGGD-GGELLVHDPRVPLVS 220 (478)
T ss_pred CCCcHHHHHHHHHHHHHHcCCeEEEECCCcchHHHHHHHHHHHHhhhccCCCccceEEEecCch-hHHHHhcCCCCCEEE
Confidence 999999999999999999999999999999999999999999999 999999999998654 889999999999999
Q ss_pred EeCCHHHHHHHHHHHhhCCCCceeeeCCCCCceeecCCCCHHHHHHHHHHHHhcccCCccccCcEEEEeCccHHHHHHHH
Q 015031 156 FTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKL 235 (414)
Q Consensus 156 ~tGs~~~~~~i~~~~~~~~~~~~~~e~gG~~~~iV~~dadl~~a~~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f~~~l 235 (414)
||||+.+|+.|.+.++ ++.+|+++|+|||||+||++|||++.|++.|++++|+|+||.|+++++||||++++|+|+++|
T Consensus 221 fTGs~~~g~~i~~~aa-~~~~~~~lElGG~~p~iV~~dAdl~~Aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~d~f~~~l 299 (478)
T cd07086 221 FTGSTEVGRRVGETVA-RRFGRVLLELGGNNAIIVMDDADLDLAVRAVLFAAVGTAGQRCTTTRRLIVHESVYDEFLERL 299 (478)
T ss_pred EECcHHHHHHHHHHHh-ccCCcEEeecCCCCcEEEcCCCCHHHHHHHHHHHHHhccCCCCcCCeEEEEcHHHHHHHHHHH
Confidence 9999999999999887 788999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhccccCCCCCCCCCccccCCHHHHHHHHHHHHHhhhcCCeEeeCCcccCC--CCceeeeEEEEeCCCCCccccccc
Q 015031 236 VEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIGK--KGYYIEPTIFTNVTEDMLIAKNEI 313 (414)
Q Consensus 236 ~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~~--~g~~~~Ptvl~~~~~~~~~~~~E~ 313 (414)
+++++++++|+|.++++++||++++.+++++++++++++++|+++++||..... +|+|++|||+.+++++|++++||+
T Consensus 300 ~~~~~~~~~g~p~~~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~v~~gg~~~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~ 379 (478)
T cd07086 300 VKAYKQVRIGDPLDEGTLVGPLINQAAVEKYLNAIEIAKSQGGTVLTGGKRIDGGEPGNYVEPTIVTGVTDDARIVQEET 379 (478)
T ss_pred HHHHHhCCcCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCEEEeCCCcCCCCCCCeEEccEEecCCCCCChhhcCCC
Confidence 999999999999999999999999999999999999999999999999976543 589999999999999999999999
Q ss_pred ccceEEEeeeCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHHhc--cceeEEEECCcCC-CCCCCCccCCCCCCCCCcc
Q 015031 314 FGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRS--IRAGIIWINCYFA-FDSDCPYGGYKMSGFGRDC 390 (414)
Q Consensus 314 fgPvl~v~~~~~~~eai~~~n~~~~gl~~sv~s~d~~~~~~~~~~--l~~g~v~vN~~~~-~~~~~pfgG~~~sG~g~~~ 390 (414)
||||++|++|+|+||||+++|+++|||++||||+|.+.+++++++ +++|+|+||++.. ..+.+||||+|.||+|+++
T Consensus 380 FgPVl~v~~~~~~deai~~~n~~~~gL~a~v~t~d~~~a~~~~~~~~~~~G~v~iN~~~~~~~~~~PfgG~~~SG~G~~~ 459 (478)
T cd07086 380 FAPILYVIKFDSLEEAIAINNDVPQGLSSSIFTEDLREAFRWLGPKGSDCGIVNVNIPTSGAEIGGAFGGEKETGGGRES 459 (478)
T ss_pred cCCEEEEEEeCCHHHHHHHHhCCCCcceEEEEcCCHHHHHHHHhcCcccceeEEECCCCCCCCCCCCCCCcccccCCccc
Confidence 999999999999999999999999999999999999999999999 9999999998765 3467899999999999999
Q ss_pred hHHHHHhhhcccEEEEeC
Q 015031 391 GLESLHNYLQVKSVVTPI 408 (414)
Q Consensus 391 g~~~~~~~~~~k~i~~~~ 408 (414)
|.+++++|++.|+|+.++
T Consensus 460 g~~~~~~f~~~k~i~~~~ 477 (478)
T cd07086 460 GSDAWKQYMRRSTCTINY 477 (478)
T ss_pred hHHHHHHhhceEEEEEeC
Confidence 999999999999998763
|
ALDH subfamily which includes the NAD+-dependent, alpha-aminoadipic semialdehyde dehydrogenase (AASADH, EC=1.2.1.31), also known as Antiquitin-1, ALDH7A1, ALDH7B or delta-1-piperideine-6-carboxylate dehydrogenase (P6CDH), and other similar sequences, such as the uncharacterized aldehyde dehydrogenase of Candidatus kuenenia AldH (locus CAJ73105). |
| >cd07124 ALDH_PutA-P5CDH-RocA Delta(1)-pyrroline-5-carboxylate dehydrogenase, RocA | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.7e-86 Score=678.39 Aligned_cols=406 Identities=37% Similarity=0.626 Sum_probs=380.4
Q ss_pred CHHHHHHHHHhHHHHHHHHHHHcCCChHHHhhccHHHHHHHHHHHHHhhhhhcCceeccccCccccccccCCcEEEEEcC
Q 015031 1 MLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMSRALQGYTLREPIGVVGHIIP 80 (414)
Q Consensus 1 L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p 80 (414)
|+++++.|++++++|++++++|+|||..++ ..|+..+++.+++++.++++..+...+...+...+.+++|+|||++|+|
T Consensus 97 L~~~a~~l~~~~~~la~~~~~e~Gk~~~ea-~~ev~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p 175 (512)
T cd07124 97 LLRAAALLRRRRFELAAWMVLEVGKNWAEA-DADVAEAIDFLEYYAREMLRLRGFPVEMVPGEDNRYVYRPLGVGAVISP 175 (512)
T ss_pred HHHHHHHHHHCHHHHHHHHHHHcCcCHHHH-HHHHHHHHHHHHHHHHHHHHhcCccccCCCCceeEEEEecceEEEEECC
Confidence 578999999999999999999999999976 4699999999999999887765544333345567899999999999999
Q ss_pred CCcChHhhHHHHHHHHhcCCeEEEecCCCChhHHHHHHHHHHHcCCCCCeEEEEcCCchhHHHHHHhCCCcCeEEEeCCH
Q 015031 81 WNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGST 160 (414)
Q Consensus 81 ~n~P~~~~~~~~~~ALaaGN~vv~kps~~~~~~~~~l~~~~~~aglp~g~v~~~~~~~~~~~~~l~~~~~~~~v~~tGs~ 160 (414)
||||+...++++++||++||+||+|||+.+|+++..+.+++.++|+|+|++|++++++.+.++.|..||++|.|.||||+
T Consensus 176 wN~P~~~~~~~i~~ALaaGN~VVlKPs~~tp~~~~~l~~~~~~aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~V~fTGs~ 255 (512)
T cd07124 176 WNFPLAILAGMTTAALVTGNTVVLKPAEDTPVIAAKLVEILEEAGLPPGVVNFLPGPGEEVGDYLVEHPDVRFIAFTGSR 255 (512)
T ss_pred CChHHHHHHHHHHHHHHcCCEEEEECCccccHHHHHHHHHHHHhCcCCCceEEeccCchHHHHHHhcCCCCCEEEEeCch
Confidence 99999999999999999999999999999999999999999999999999999999877889999999999999999999
Q ss_pred HHHHHHHHHHhhC-----CCCceeeeCCCCCceeecCCCCHHHHHHHHHHHHhcccCCccccCcEEEEeCccHHHHHHHH
Q 015031 161 DVGRQVMQAAATS-----NLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKL 235 (414)
Q Consensus 161 ~~~~~i~~~~~~~-----~~~~~~~e~gG~~~~iV~~dadl~~a~~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f~~~l 235 (414)
.+|+.|.+.++.. +++|+++|+||+||+||++|||++.|++.+++++|.|+||.|+++++||||++++|+|+++|
T Consensus 256 ~~g~~i~~~aa~~~~~~~~l~~~~lElgGk~p~iV~~daDl~~Aa~~i~~~~f~~~GQ~C~a~~rv~V~~~i~~~f~~~l 335 (512)
T cd07124 256 EVGLRIYERAAKVQPGQKWLKRVIAEMGGKNAIIVDEDADLDEAAEGIVRSAFGFQGQKCSACSRVIVHESVYDEFLERL 335 (512)
T ss_pred HHHHHHHHHHhcccccccCCCcEEEECCCCCeEEECCCCCHHHHHHHHHHHHHhhCCCccccceEEEEcHHHHHHHHHHH
Confidence 9999999988732 68999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhccccCCCCCCCCCccccCCHHHHHHHHHHHHHhhhcCCeEeeCCcccCC--CCceeeeEEEEeCCCCCccccccc
Q 015031 236 VEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIGK--KGYYIEPTIFTNVTEDMLIAKNEI 313 (414)
Q Consensus 236 ~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~~--~g~~~~Ptvl~~~~~~~~~~~~E~ 313 (414)
+++++++++|+|.|+++++||++++.+++++.+++++++. |+++++||..... +|+|++|||+.+++++|++++||+
T Consensus 336 ~~~~~~~~~g~p~d~~~~~Gpli~~~~~~~v~~~i~~a~~-g~~vl~gG~~~~~~~~g~~~~Ptvl~~v~~~~~i~~eE~ 414 (512)
T cd07124 336 VERTKALKVGDPEDPEVYMGPVIDKGARDRIRRYIEIGKS-EGRLLLGGEVLELAAEGYFVQPTIFADVPPDHRLAQEEI 414 (512)
T ss_pred HHHHHhCCCCCCCCCCCcccCCcCHHHHHHHHHHHHHHHh-CCEEEecCccCCCCCCCceEcCEEEecCCCCChHHhCCC
Confidence 9999999999999999999999999999999999999988 8899999976542 689999999999999999999999
Q ss_pred ccceEEEeeeCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHHhccceeEEEECCcCC--CCCCCCccCCCCCCCC-Ccc
Q 015031 314 FGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSIRAGIIWINCYFA--FDSDCPYGGYKMSGFG-RDC 390 (414)
Q Consensus 314 fgPvl~v~~~~~~~eai~~~n~~~~gl~~sv~s~d~~~~~~~~~~l~~g~v~vN~~~~--~~~~~pfgG~~~sG~g-~~~ 390 (414)
||||++|++|+|+||||+++|++++||++||||+|.+.++++++++++|.|+||+... ..+.+||||+|.||+| +.+
T Consensus 415 FgPvl~v~~~~~~~eai~~~n~~~~gL~~~v~t~d~~~~~~~~~~l~~G~v~vN~~~~~~~~~~~PfGG~k~SG~G~~~~ 494 (512)
T cd07124 415 FGPVLAVIKAKDFDEALEIANDTEYGLTGGVFSRSPEHLERARREFEVGNLYANRKITGALVGRQPFGGFKMSGTGSKAG 494 (512)
T ss_pred cCCeEEEEecCCHHHHHHHHhCCCCCCeEEEEcCCHHHHHHHHHhCCcceEEECCCCCCCCCCCCCCCccccccCCCccC
Confidence 9999999999999999999999999999999999999999999999999999998764 3357899999999999 788
Q ss_pred hHHHHHhhhcccEEEEeC
Q 015031 391 GLESLHNYLQVKSVVTPI 408 (414)
Q Consensus 391 g~~~~~~~~~~k~i~~~~ 408 (414)
|.+|+++||++|+++.++
T Consensus 495 g~~~~~~~t~~k~v~~~~ 512 (512)
T cd07124 495 GPDYLLQFMQPKTVTENF 512 (512)
T ss_pred cHHHHHHhccEEEEEEeC
Confidence 999999999999998764
|
Delta(1)-pyrroline-5-carboxylate dehydrogenase (EC=1.5.1.12 ), RocA: a proline catabolic enzyme of the aldehyde dehydrogenase (ALDH) protein superfamily. The proline catabolic enzymes, proline dehydrogenase and Delta(1)-pyrroline-5-carboxylate dehydrogenase (P5CDH), catalyze the two-step oxidation of proline to glutamate; P5CDH catalyzes the oxidation of glutamate semialdehyde, utilizing NAD+ as the electron acceptor. In some bacteria, the two enzymes are fused into the bifunctional flavoenzyme, proline utilization A (PutA). In this CD, monofunctional enzyme sequences such as seen in the Bacillus subtilis RocA P5CDH are also present. These enzymes play important roles in cellular redox control, superoxide generation, and apoptosis. |
| >cd07109 ALDH_AAS00426 Uncharacterized Saccharopolyspora spinosa aldehyde dehydrogenase (AAS00426)-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.8e-86 Score=671.01 Aligned_cols=402 Identities=47% Similarity=0.772 Sum_probs=378.2
Q ss_pred CHHHHHHHHHhHHHHHHHHHHHcCCChHHHhhccHHHHHHHHHHHHHhhhhhcCceeccccCccccccccCCcEEEEEcC
Q 015031 1 MLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMSRALQGYTLREPIGVVGHIIP 80 (414)
Q Consensus 1 L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p 80 (414)
|+++++.|++|+++|++++++|+|||..++ ..|+..+++.+++++++.++..+...+...+...+.+++|+|||++|+|
T Consensus 48 L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a-~~ev~~~~~~l~~~~~~~~~~~g~~~~~~~~~~~~~~~~P~GVv~~I~P 126 (454)
T cd07109 48 LLRIARLIREHADELARLESLDTGKPLTQA-RADVEAAARYFEYYGGAADKLHGETIPLGPGYFVYTVREPHGVTGHIIP 126 (454)
T ss_pred HHHHHHHHHhHHHHHHHHHHHHcCCCHHHH-HHHHHHHHHHHHHHHHHHHHhcCcccccCCCceEEEEEeeeeEEEEECC
Confidence 578999999999999999999999999975 5699999999999998877665544443345567899999999999999
Q ss_pred CCcChHhhHHHHHHHHhcCCeEEEecCCCChhHHHHHHHHHHHcCCCCCeEEEEcCCchhHHHHHHhCCCcCeEEEeCCH
Q 015031 81 WNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGST 160 (414)
Q Consensus 81 ~n~P~~~~~~~~~~ALaaGN~vv~kps~~~~~~~~~l~~~~~~aglp~g~v~~~~~~~~~~~~~l~~~~~~~~v~~tGs~ 160 (414)
||||+...++++++||++||+||+|||+.+|.++..+.+++.++|+|+|++|++++++.+.++.|+.|+++|.|.||||+
T Consensus 127 ~N~P~~~~~~~~~~ALaaGN~VvlKps~~~p~~~~~l~~~~~~aGlP~gv~~~v~g~~~~~~~~L~~~~~v~~v~ftGs~ 206 (454)
T cd07109 127 WNYPLQITGRSVAPALAAGNAVVVKPAEDAPLTALRLAELAEEAGLPAGALNVVTGLGAEAGAALVAHPGVDHISFTGSV 206 (454)
T ss_pred CchHHHHHHHHHHHHHHcCCEEEEECCCCChHHHHHHHHHHHHcCcCccceEEEecCchHHHHHHhcCCCCCEEEEECCH
Confidence 99999999999999999999999999999999999999999999999999999999777889999999999999999999
Q ss_pred HHHHHHHHHHhhCCCCceeeeCCCCCceeecCCCCHHHHHHHHHHHHhcccCCccccCcEEEEeCccHHHHHHHHHHHHh
Q 015031 161 DVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAK 240 (414)
Q Consensus 161 ~~~~~i~~~~~~~~~~~~~~e~gG~~~~iV~~dadl~~a~~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f~~~l~~~~~ 240 (414)
.+|+.|.+.++ ++++|+++|+|||||+||++|||++.|++.+++++|.|+||.|+++++||||++++|+|+++|+++++
T Consensus 207 ~~g~~i~~~aa-~~~~p~~lElgG~~~~iV~~daDl~~Aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~~~f~~~l~~~~~ 285 (454)
T cd07109 207 ETGIAVMRAAA-ENVVPVTLELGGKSPQIVFADADLEAALPVVVNAIIQNAGQTCSAGSRLLVHRSIYDEVLERLVERFR 285 (454)
T ss_pred HHHHHHHHHHh-hcCCcEEEECCCCCceEECCCCCHHHHHHHHHHHHHhccCCCCccCcEEEEcHHHHHHHHHHHHHHHH
Confidence 99999999987 88999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccCCCCCCCCCccccCCHHHHHHHHHHHHHhhhcCCeEeeCCcccC---CCCceeeeEEEEeCCCCCcccccccccce
Q 015031 241 AWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIG---KKGYYIEPTIFTNVTEDMLIAKNEIFGPV 317 (414)
Q Consensus 241 ~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~---~~g~~~~Ptvl~~~~~~~~~~~~E~fgPv 317 (414)
++++|+|.+ .+++||++++.+++++++++++++++|+++++||.... +.|+|++|||+.+++++|++++||+||||
T Consensus 286 ~~~~G~p~~-~~~~gpli~~~~~~~~~~~i~~a~~~ga~~l~gg~~~~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~fgPv 364 (454)
T cd07109 286 ALRVGPGLE-DPDLGPLISAKQLDRVEGFVARARARGARIVAGGRIAEGAPAGGYFVAPTLLDDVPPDSRLAQEEIFGPV 364 (454)
T ss_pred hCCCCCCcc-cCcCCCccCHHHHHHHHHHHHHHHhCCCEEEeCCCcCcccCCCCcEECcEEEecCCCCChhhhCCCCCce
Confidence 999999986 68999999999999999999999999999999987543 36899999999999999999999999999
Q ss_pred EEEeeeCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHHhccceeEEEECCcC-CCCCCCCccCCCCCCCCCcchHHHHH
Q 015031 318 MALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSIRAGIIWINCYF-AFDSDCPYGGYKMSGFGRDCGLESLH 396 (414)
Q Consensus 318 l~v~~~~~~~eai~~~n~~~~gl~~sv~s~d~~~~~~~~~~l~~g~v~vN~~~-~~~~~~pfgG~~~sG~g~~~g~~~~~ 396 (414)
++|++|+|+||||+++|+++|||++||||+|.+.++++++++++|+|+||++. ...+.+||||+|.||+|+++|.++++
T Consensus 365 l~v~~~~~~deAi~~~n~~~~gL~~~i~t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~~pfgG~k~SG~G~~~g~~~~~ 444 (454)
T cd07109 365 LAVMPFDDEAEAIALANGTDYGLVAGVWTRDGDRALRVARRLRAGQVFVNNYGAGGGIELPFGGVKKSGHGREKGLEALY 444 (454)
T ss_pred EEEEecCCHHHHHHHhhCCCCCceEEEECCCHHHHHHHHHhcCcCeEEECCCCCCCCCCCCcCCcccCcCCccchHHHHH
Confidence 99999999999999999999999999999999999999999999999999987 45567899999999999999999999
Q ss_pred hhhcccEEE
Q 015031 397 NYLQVKSVV 405 (414)
Q Consensus 397 ~~~~~k~i~ 405 (414)
+|+++|+++
T Consensus 445 ~f~~~k~i~ 453 (454)
T cd07109 445 NYTQTKTVA 453 (454)
T ss_pred HHhceeEEe
Confidence 999999885
|
Uncharacterized aldehyde dehydrogenase of Saccharopolyspora spinosa (AAS00426) and other similar sequences, are present in this CD. |
| >cd07130 ALDH_F7_AASADH NAD+-dependent alpha-aminoadipic semialdehyde dehydrogenase, ALDH family members 7A1 and 7B | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.9e-86 Score=671.76 Aligned_cols=404 Identities=31% Similarity=0.506 Sum_probs=372.5
Q ss_pred CHHHHHHHHHhHHHHHHHHHHHcCCChHHHhhccHHHHHHHHHHHHHhhhhhcCceeccc-cCccccccccCCcEEEEEc
Q 015031 1 MLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMS-RALQGYTLREPIGVVGHII 79 (414)
Q Consensus 1 L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~-~~~~~~~~~~P~Gvv~~i~ 79 (414)
|+++++.|++|+++|++++++|+|||..++ ..|+..+++.+++++...+...+...+.. .+...+.+++|+|||++|+
T Consensus 62 L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a-~~ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~I~ 140 (474)
T cd07130 62 VRQIGDALRKKKEALGKLVSLEMGKILPEG-LGEVQEMIDICDFAVGLSRQLYGLTIPSERPGHRMMEQWNPLGVVGVIT 140 (474)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHcCCCHHHH-HHHHHHHHHHHHHHHHhHHHhcCccccCCCCCceEEEEEecceeEEEEc
Confidence 578999999999999999999999999975 47999999999999887665544333221 2344577899999999999
Q ss_pred CCCcChHhhHHHHHHHHhcCCeEEEecCCCChhHHHHHHHH----HHHcCCCCCeEEEEcCCchhHHHHHHhCCCcCeEE
Q 015031 80 PWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHL----AKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVS 155 (414)
Q Consensus 80 p~n~P~~~~~~~~~~ALaaGN~vv~kps~~~~~~~~~l~~~----~~~aglp~g~v~~~~~~~~~~~~~l~~~~~~~~v~ 155 (414)
|||||+...++++++||++||+||+|||+.+|.++..+.++ |.++|+|+|++|+++++ .+.++.|+.|+++|.|.
T Consensus 141 p~N~P~~~~~~~~~~ALaaGN~VvlKps~~~p~~~~~l~~l~~~~~~~aglP~gv~~~v~g~-~~~~~~L~~~~~vd~V~ 219 (474)
T cd07130 141 AFNFPVAVWGWNAAIALVCGNVVVWKPSPTTPLTAIAVTKIVARVLEKNGLPGAIASLVCGG-ADVGEALVKDPRVPLVS 219 (474)
T ss_pred cCCCHHHHHHHHhhHHHHcCCeEEeeCCccCHHHHHHHHHHHHHHHHhcCCCCCcEEEEeCC-hhHHHHHhcCCCCCEEE
Confidence 99999999999999999999999999999999999887766 57999999999999984 46789999999999999
Q ss_pred EeCCHHHHHHHHHHHhhCCCCceeeeCCCCCceeecCCCCHHHHHHHHHHHHhcccCCccccCcEEEEeCccHHHHHHHH
Q 015031 156 FTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKL 235 (414)
Q Consensus 156 ~tGs~~~~~~i~~~~~~~~~~~~~~e~gG~~~~iV~~dadl~~a~~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f~~~l 235 (414)
||||+++|+.|.+.++ ++.+|+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||++++|+|+++|
T Consensus 220 fTGs~~~g~~i~~~aa-~~~~~~~lElGGk~p~iV~~dadl~~Aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~d~f~~~l 298 (474)
T cd07130 220 FTGSTAVGRQVGQAVA-ARFGRSLLELGGNNAIIVMEDADLDLAVRAVLFAAVGTAGQRCTTTRRLIVHESIYDEVLERL 298 (474)
T ss_pred EECchHHHHHHHHHHH-hcCCCEEEEcCCCCeEEECCCCCHHHHHHHHHHHHHhcCCCCCcCCeEEEEcHhHHHHHHHHH
Confidence 9999999999999887 788999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhccccCCCCCCCCCccccCCHHHHHHHHHHHHHhhhcCCeEeeCCcccCCCCceeeeEEEEeCCCCCccccccccc
Q 015031 236 VEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIGKKGYYIEPTIFTNVTEDMLIAKNEIFG 315 (414)
Q Consensus 236 ~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fg 315 (414)
+++++++++|+|.++++++||+++..+++++++++++++++|+++++||.....+|+|++|||+.++++ |++++||+||
T Consensus 299 ~~~~~~l~~g~p~~~~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~g~~~~PTvl~~~~~-~~i~~eE~FG 377 (474)
T cd07130 299 KKAYKQVRIGDPLDDGTLVGPLHTKAAVDNYLAAIEEAKSQGGTVLFGGKVIDGPGNYVEPTIVEGLSD-APIVKEETFA 377 (474)
T ss_pred HHHHhcCCcCCCCCCCCCCCCCcCHHHHHHHHHHHHHHHHCCCEEEECCCcCCCCCeEEccEEEecCCC-CHHHhCCCcC
Confidence 999999999999999999999999999999999999999999999999986544689999999988766 9999999999
Q ss_pred ceEEEeeeCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHHhc--cceeEEEECCcCC-CCCCCCccCCCCCCCCCcchH
Q 015031 316 PVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRS--IRAGIIWINCYFA-FDSDCPYGGYKMSGFGRDCGL 392 (414)
Q Consensus 316 Pvl~v~~~~~~~eai~~~n~~~~gl~~sv~s~d~~~~~~~~~~--l~~g~v~vN~~~~-~~~~~pfgG~~~sG~g~~~g~ 392 (414)
||++|++|+|+||||+++|+++|||++||||+|.+.+++++++ +++|+|+||+.+. ..+.+||||+|.||+|+++|+
T Consensus 378 Pvl~v~~~~~~~eai~~aN~~~~gL~a~v~t~d~~~a~~~~~~~~~~~g~v~iN~~~~~~~~~~PfgG~k~SG~G~~~g~ 457 (474)
T cd07130 378 PILYVLKFDTLEEAIAWNNEVPQGLSSSIFTTDLRNAFRWLGPKGSDCGIVNVNIGTSGAEIGGAFGGEKETGGGRESGS 457 (474)
T ss_pred CeEEEEEeCCHHHHHHHHhCCCCCceEEEEcCCHHHHHHHHhhcCcceEEEEEcCCCCCCCCCCCcCccccccCCccchH
Confidence 9999999999999999999999999999999999999999987 8999999998654 456899999999999999999
Q ss_pred HHHHhhhcccEEEEeC
Q 015031 393 ESLHNYLQVKSVVTPI 408 (414)
Q Consensus 393 ~~~~~~~~~k~i~~~~ 408 (414)
+++++|+++|++++++
T Consensus 458 ~~~~~f~~~k~~~~~~ 473 (474)
T cd07130 458 DAWKQYMRRSTCTINY 473 (474)
T ss_pred HHHHHHhheEEEEEec
Confidence 9999999999988753
|
Alpha-aminoadipic semialdehyde dehydrogenase (AASADH, EC=1.2.1.31), also known as ALDH7A1, Antiquitin-1, ALDH7B, or delta-1-piperideine-6-carboxylate dehydrogenase (P6CDH), is a NAD+-dependent ALDH. Human ALDH7A1 is involved in the pipecolic acid pathway of lysine catabolism, catalyzing the oxidation of alpha-aminoadipic semialdehyde to alpha-aminoadipate. Arabidopsis thaliana ALDH7B4 appears to be an osmotic-stress-inducible ALDH gene encoding a turgor-responsive or stress-inducible ALDH. The Streptomyces clavuligerus P6CDH appears to be involved in cephamycin biosynthesis, catalyzing the second stage of the two-step conversion of lysine to alpha-aminoadipic acid. The ALDH7A1 enzyme and others in this group have been observed as tetramers, yet the bacterial P6CDH enzyme has been reported as a monomer. |
| >TIGR01804 BADH glycine betaine aldehyde dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.7e-86 Score=672.98 Aligned_cols=401 Identities=46% Similarity=0.803 Sum_probs=377.2
Q ss_pred CHHHHHHHHHhHHHHHHHHHHHcCCChHHHhhccHHHHHHHHHHHHHhhhhhcCceeccccCccccccccCCcEEEEEcC
Q 015031 1 MLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMSRALQGYTLREPIGVVGHIIP 80 (414)
Q Consensus 1 L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p 80 (414)
|+++++.|++++++|++++++|+|||..++...|+..+++.+++++..+++..+...+.......+..++|+|||++|+|
T Consensus 63 L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~I~p 142 (467)
T TIGR01804 63 LRRIAELIRERNEELAKLETLDTGKTLEETSVADMDDIADVFEFFAGLADKDGGEIIPLPIPSFSYTIREPLGVCVGIGA 142 (467)
T ss_pred HHHHHHHHHHhHHHHHHHHHHHcCCCHHHHhHHHHHHHHHHHHHHHHHHHHhCCccccCCCCceEEEEEeeeeEEEEECC
Confidence 57899999999999999999999999997646799999999999998887655443332222446788999999999999
Q ss_pred CCcChHhhHHHHHHHHhcCCeEEEecCCCChhHHHHHHHHHHHcCCCCCeEEEEcCCchhHHHHHHhCCCcCeEEEeCCH
Q 015031 81 WNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGST 160 (414)
Q Consensus 81 ~n~P~~~~~~~~~~ALaaGN~vv~kps~~~~~~~~~l~~~~~~aglp~g~v~~~~~~~~~~~~~l~~~~~~~~v~~tGs~ 160 (414)
||||+...++++++||++||+||+|||+.+|.++..+.++|.++|+|+|++|++++++.+.++.|+.|+.+|.|.||||+
T Consensus 143 ~N~P~~~~~~~~~~ALaaGN~VvlKps~~tp~~~~~l~~~~~~aglP~gv~~~v~g~~~~~~~~L~~~~~v~~V~fTGs~ 222 (467)
T TIGR01804 143 WNYPLQIASWKIAPALAAGNAMVFKPSEITPLTALKVAELMEEAGLPDGVFNVVLGKGAEVGEPLVNHKDVAKVSFTGGV 222 (467)
T ss_pred CchHHHHHHHHHHHHHhcCCEEEeeCCccCcHHHHHHHHHHHHcCcCcCcEEEEeCCcHHHHHHHhcCCCCCEEEEECcH
Confidence 99999999999999999999999999999999999999999999999999999998767889999999999999999999
Q ss_pred HHHHHHHHHHhhCCCCceeeeCCCCCceeecCCCCHHHHHHHHHHHHhcccCCccccCcEEEEeCccHHHHHHHHHHHHh
Q 015031 161 DVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAK 240 (414)
Q Consensus 161 ~~~~~i~~~~~~~~~~~~~~e~gG~~~~iV~~dadl~~a~~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f~~~l~~~~~ 240 (414)
.+|+.|.+.++ .+++|+++|+|||||+||++|||++.|++.+++++|.|+||.|+++++||||++++|+|+++|+++++
T Consensus 223 ~~g~~v~~~a~-~~l~~~~lElGG~~~~iV~~dADl~~Aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~ 301 (467)
T TIGR01804 223 PTGKKIMAAAA-DHLKHVTMELGGKSPLIVFDDADLELAVDQAMNGNFFSAGQVCSNGTRVFVHNKIKEKFEARLVERTK 301 (467)
T ss_pred HHHHHHHHHHH-hcCCcEEEecCCCCeeEECCCCCHHHHHHHHHHHHHHhcCCCCCCCCEEEEcHHHHHHHHHHHHHHHH
Confidence 99999999887 78899999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccCCCCCCCCCccccCCHHHHHHHHHHHHHhhhcCCeEeeCCcccC----CCCceeeeEEEEeCCCCCcccccccccc
Q 015031 241 AWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIG----KKGYYIEPTIFTNVTEDMLIAKNEIFGP 316 (414)
Q Consensus 241 ~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~----~~g~~~~Ptvl~~~~~~~~~~~~E~fgP 316 (414)
++++|+|.++++++||++++.+++++++++++++.+|+++++||.... .+|+|++|||+.+++++|++++||+|||
T Consensus 302 ~~~~g~p~~~~~~~gpli~~~~~~~~~~~i~~a~~~Ga~vl~gg~~~~~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~FgP 381 (467)
T TIGR01804 302 RIKLGDGFDEATEMGPLISAEHRDKVESYIEKGKEEGATLACGGKRPEREGLQNGFFIEPTVFTDCTDDMTIVREEIFGP 381 (467)
T ss_pred hCCCCCCCCCCCccCccCCHHHHHHHHHHHHHHHHCCCEEEeCCCccccccCCCCeEEeeEEEeCCCCCChHHhCCCCCc
Confidence 999999999999999999999999999999999999999999997543 2589999999999999999999999999
Q ss_pred eEEEeeeCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHHhccceeEEEECCcCCCCCCCCccCCCCCCCCCcchHHHHH
Q 015031 317 VMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSIRAGIIWINCYFAFDSDCPYGGYKMSGFGRDCGLESLH 396 (414)
Q Consensus 317 vl~v~~~~~~~eai~~~n~~~~gl~~sv~s~d~~~~~~~~~~l~~g~v~vN~~~~~~~~~pfgG~~~sG~g~~~g~~~~~ 396 (414)
|++|++|+|.||||+++|+++|||++||||+|.+.++++++++++|+|+||++....+.+||||+|.||+|+++|.++++
T Consensus 382 vl~v~~~~~~deai~~~n~~~~gLsa~i~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~pfGG~k~SG~G~~~g~~~~~ 461 (467)
T TIGR01804 382 VMTVLTFSSEDEVIARANDTIYGLAAGVFTADLGRAHRVANQLKAGTVWINDFHPYPAEAPWGGYKQSGIGRENGKAGLA 461 (467)
T ss_pred eEEEEecCCHHHHHHHHhCCCCCceEEEECCCHHHHHHHHHhCCcceEEECCCCCCCCCCCcCCcccCccCCCChHHHHH
Confidence 99999999999999999999999999999999999999999999999999998777778899999999999999999999
Q ss_pred hhhccc
Q 015031 397 NYLQVK 402 (414)
Q Consensus 397 ~~~~~k 402 (414)
+||+.|
T Consensus 462 ~~~~~~ 467 (467)
T TIGR01804 462 EYTEVK 467 (467)
T ss_pred HHhccC
Confidence 999875
|
Betaine aldehyde dehydrogenase is a member of the aldehyde dehydrogenase family (pfam00171). |
| >PRK09847 gamma-glutamyl-gamma-aminobutyraldehyde dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.5e-86 Score=672.32 Aligned_cols=405 Identities=44% Similarity=0.761 Sum_probs=380.3
Q ss_pred CHHHHHHHHHhHHHHHHHHHHHcCCChHHHhhccHHHHHHHHHHHHHhhhhhcCceeccccCccccccccCCcEEEEEcC
Q 015031 1 MLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMSRALQGYTLREPIGVVGHIIP 80 (414)
Q Consensus 1 L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p 80 (414)
|+++++.|++|+++|++++++|+|||..++...|+..+++.++++++.+++..+...+...+...+..++|+|||++|+|
T Consensus 87 L~~~a~~l~~~~~ela~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~a~~~~~~~g~~~~~~~~~~~~~~~~P~GVv~~I~P 166 (494)
T PRK09847 87 LNKLADLMEAHAEELALLETLDTGKPIRHSLRDDIPGAARAIRWYAEAIDKVYGEVATTSSHELAMIVREPVGVIAAIVP 166 (494)
T ss_pred HHHHHHHHHHhHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCccccCCCCceeEEEecceeEEEEECC
Confidence 57899999999999999999999999987655699999999999999887765554333334456789999999999999
Q ss_pred CCcChHhhHHHHHHHHhcCCeEEEecCCCChhHHHHHHHHHHHcCCCCCeEEEEcCCchhHHHHHHhCCCcCeEEEeCCH
Q 015031 81 WNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGST 160 (414)
Q Consensus 81 ~n~P~~~~~~~~~~ALaaGN~vv~kps~~~~~~~~~l~~~~~~aglp~g~v~~~~~~~~~~~~~l~~~~~~~~v~~tGs~ 160 (414)
||||+...++++++||++||+||+|||+.+|.++..+.+++.++|+|+|++|++++++.+.+..|+.|+.+|.|.||||+
T Consensus 167 wN~P~~~~~~~~~~ALaaGN~VvlKps~~~p~~~~~l~~~~~~aGlP~g~v~~v~g~~~~~~~~L~~~~~vd~v~fTGs~ 246 (494)
T PRK09847 167 WNFPLLLTCWKLGPALAAGNSVILKPSEKSPLSAIRLAGLAKEAGLPDGVLNVVTGFGHEAGQALSRHNDIDAIAFTGST 246 (494)
T ss_pred CccHHHHHHHHHHHHHHcCCEEEEeCCCCChHHHHHHHHHHHHcCcCcCcEEEEeCCChhHHHHHhcCCCCCEEEEECCH
Confidence 99999999999999999999999999999999999999999999999999999999777889999999999999999999
Q ss_pred HHHHHHHHHHhhCCCCceeeeCCCCCceeecCCC-CHHHHHHHHHHHHhcccCCccccCcEEEEeCccHHHHHHHHHHHH
Q 015031 161 DVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDV-DVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKA 239 (414)
Q Consensus 161 ~~~~~i~~~~~~~~~~~~~~e~gG~~~~iV~~da-dl~~a~~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f~~~l~~~~ 239 (414)
.+|+.|.+.++..+++|+++|+||+||+||.+|+ |++.|++.+++++|.|+||.|+++++||||++++|+|+++|++++
T Consensus 247 ~~g~~v~~~aa~~~~~~~~lElGGk~~~iV~~daaDl~~Aa~~i~~~~~~~aGQ~C~a~~rv~V~~~i~d~f~~~l~~~~ 326 (494)
T PRK09847 247 RTGKQLLKDAGDSNMKRVWLEAGGKSANIVFADCPDLQQAASATAAGIFYNQGQVCIAGTRLLLEESIADEFLALLKQQA 326 (494)
T ss_pred HHHHHHHHHhhhhCCCeEEEecCCCCeeEEcCCccCHHHHHHHHHHHHHhcCCCCCCCCcEEEEcHHHHHHHHHHHHHHH
Confidence 9999999987634789999999999999999997 999999999999999999999999999999999999999999999
Q ss_pred hccccCCCCCCCCCccccCCHHHHHHHHHHHHHhhhcCCeEeeCCcccCCCCceeeeEEEEeCCCCCcccccccccceEE
Q 015031 240 KAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIGKKGYYIEPTIFTNVTEDMLIAKNEIFGPVMA 319 (414)
Q Consensus 240 ~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~ 319 (414)
+++++|+|.++++.+||++++.+++++.+++++++++| ++++||... ..+.|++|||+.+++++|++++||+||||++
T Consensus 327 ~~~~~g~p~~~~~~~gpli~~~~~~~v~~~v~~a~~~G-~i~~gg~~~-~~~~~~~Ptvl~~v~~~~~~~~eE~FgPvl~ 404 (494)
T PRK09847 327 QNWQPGHPLDPATTMGTLIDCAHADSVHSFIREGESKG-QLLLDGRNA-GLAAAIGPTIFVDVDPNASLSREEIFGPVLV 404 (494)
T ss_pred HhcCCCCCCCCCCcCCCCcCHHHHHHHHHHHHHHHHCC-eEEECCccC-CCCceEeeEEEeCCCCCChHHhCcCcCceEE
Confidence 99999999999999999999999999999999999999 999998764 3578999999999999999999999999999
Q ss_pred EeeeCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHHhccceeEEEECCcCCCCCCCCccCCCCCCCCCcchHHHHHhhh
Q 015031 320 LMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSIRAGIIWINCYFAFDSDCPYGGYKMSGFGRDCGLESLHNYL 399 (414)
Q Consensus 320 v~~~~~~~eai~~~n~~~~gl~~sv~s~d~~~~~~~~~~l~~g~v~vN~~~~~~~~~pfgG~~~sG~g~~~g~~~~~~~~ 399 (414)
|++|+|+||||+++|++++||++||||+|.+.+.++++++++|+|+||++....+.+||||+|.||+|+++|.+|+++||
T Consensus 405 v~~~~~~~eai~~~n~~~~gLsa~v~t~d~~~a~~~~~~l~~G~v~iN~~~~~~~~~PfGG~k~SG~G~~~g~~~l~~ft 484 (494)
T PRK09847 405 VTRFTSEEQALQLANDSQYGLGAAVWTRDLSRAHRMSRRLKAGSVFVNNYNDGDMTVPFGGYKQSGNGRDKSLHALEKFT 484 (494)
T ss_pred EEecCCHHHHHHHHhCCCCCceEEEEcCCHHHHHHHHHhCCcceEEECCCCCCCCCCCcCCCcccccCccchHHHHHHhh
Confidence 99999999999999999999999999999999999999999999999998766678999999999999999999999999
Q ss_pred cccEEEEe
Q 015031 400 QVKSVVTP 407 (414)
Q Consensus 400 ~~k~i~~~ 407 (414)
++|+|+++
T Consensus 485 ~~k~v~~~ 492 (494)
T PRK09847 485 ELKTIWIS 492 (494)
T ss_pred ceEEEEEe
Confidence 99999764
|
|
| >TIGR03250 PhnAcAld_DH putative phosphonoacetaldehyde dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.2e-86 Score=669.96 Aligned_cols=401 Identities=32% Similarity=0.560 Sum_probs=373.4
Q ss_pred CHHHHHHHHHhHHHHHHHHHHHcCCChHHHhhccHHHHHHHHHHHHHhhhhhcCceecc-----ccCccccccccCC-cE
Q 015031 1 MLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKM-----SRALQGYTLREPI-GV 74 (414)
Q Consensus 1 L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~P~-Gv 74 (414)
|+++++.|++++++|++++++|+|||..++ ..|+..+++.+++++..+.+..+..... ..+...+..++|+ ||
T Consensus 64 l~~~a~~l~~~~~ela~~~~~e~Gk~~~~a-~~ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~Gv 142 (472)
T TIGR03250 64 LDRAAALLAARKEEISDLITLESGLSKKDS-LYEVGRVADVLTFAAAEALRDDGQIFSCDLTPHGKARKVFTQREPLLGV 142 (472)
T ss_pred HHHHHHHHHHhHHHHHHHHHHHhCCCHHHH-HHHHHHHHHHHHHHHHHHHHhcCcccccccCCCCCCceEEEEEcCCCCE
Confidence 578999999999999999999999999975 5699999999999998876654432211 1133457889997 99
Q ss_pred EEEEcCCCcChHhhHHHHHHHHhcCCeEEEecCCCChhHHHHHHHHHHHcCCCCCeEEEEcCCchhHHHHHHhCCCcCeE
Q 015031 75 VGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKV 154 (414)
Q Consensus 75 v~~i~p~n~P~~~~~~~~~~ALaaGN~vv~kps~~~~~~~~~l~~~~~~aglp~g~v~~~~~~~~~~~~~l~~~~~~~~v 154 (414)
|++|+|||||+...++++++||++||+||+|||+.+|.++..+.+++.++|+|+|++|++++++.+.+..|+.||+++.|
T Consensus 143 v~~I~P~N~P~~~~~~~~~~ALaaGN~VvlKps~~~p~~~~~l~~~~~~aGlP~gvv~~v~g~~~~~~~~l~~~~~v~~v 222 (472)
T TIGR03250 143 ISAITPFNHPMNQVAHKIAPAIATNNRMVVKPSEKTPLSALYLADILYEAGLPPQMLQVVTGDPREIADELITNPHVDLV 222 (472)
T ss_pred EEEEcCCcHHHHHHHHHHHHHHHcCCEEEEECCCcchHHHHHHHHHHHHcCCCcccEEEEecCchHHHHHHhcCCCCCEE
Confidence 99999999999999999999999999999999999999999999999999999999999999777889999999999999
Q ss_pred EEeCCHHHHHHHHHHHhhCCCCceeeeCCCCCceeecCCCCHHHHHHHHHHHHhcccCCccccCcEEEEeCccHHHHHHH
Q 015031 155 SFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKK 234 (414)
Q Consensus 155 ~~tGs~~~~~~i~~~~~~~~~~~~~~e~gG~~~~iV~~dadl~~a~~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f~~~ 234 (414)
.||||+.+|+.|.+.++ .+|+++|+|||||+||++|||++.|++.+++++|.|+||.|+++++||||++++|+|+++
T Consensus 223 ~fTGs~~~g~~i~~~a~---~~~~~lElGGk~p~iV~~dAdl~~aa~~i~~~~f~~~GQ~C~a~~rv~V~~~i~d~f~~~ 299 (472)
T TIGR03250 223 TFTGGVAIGKYIAARAG---YRRQVLELGGNDPLIVMEDADLDRAADLAVKGSYKNSGQRCTAVKRMLVQESVADRFTEL 299 (472)
T ss_pred EEECcHHHHHHHHHHhc---CCceEEecCCCCeEEECCCCCHHHHHHHHHHHHHHhhCCCCCCCcEEEEeHhHHHHHHHH
Confidence 99999999999998764 689999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhccccCCCCCCCCCccccCCHHHHHHHHHHHHHhhhcCCeEeeCCcccCCCCceeeeEEEEeCCCCCcccccccc
Q 015031 235 LVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIGKKGYYIEPTIFTNVTEDMLIAKNEIF 314 (414)
Q Consensus 235 l~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~f 314 (414)
|+++++++++|+|.++++++||++++.+++++++++++++++|+++++||.. .|+|++|||+.+++++|++++||+|
T Consensus 300 l~~~~~~~~~G~p~~~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~vl~gg~~---~g~~~~PTvl~~v~~~~~i~~eE~F 376 (472)
T TIGR03250 300 LVEKTRAWRYGDPMDPSVDMGTVIDEAAAILFEARVNEAIAQGARLLLGNVR---DGALYAPTVLDRVDPSMTLVREETF 376 (472)
T ss_pred HHHHHHhcCCCCCCCCCCcCCCCCCHHHHHHHHHHHHHHHHCCCEEEECCCc---CCEEEcCEEEeCCCCCChHHhCCCc
Confidence 9999999999999999999999999999999999999999999999999964 5899999999999999999999999
Q ss_pred cceEEEeeeCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHHhccceeEEEECCcCCCC-CCCCccCCCCCCCC-CcchH
Q 015031 315 GPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSIRAGIIWINCYFAFD-SDCPYGGYKMSGFG-RDCGL 392 (414)
Q Consensus 315 gPvl~v~~~~~~~eai~~~n~~~~gl~~sv~s~d~~~~~~~~~~l~~g~v~vN~~~~~~-~~~pfgG~~~sG~g-~~~g~ 392 (414)
|||++|++|+|.+||++++|+++|||++||||+|.+.+.++++++++|+|+||+..... +.+||||+|.||+| +.+|.
T Consensus 377 GPvl~v~~~~~~~eai~~aN~~~~gL~a~v~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~~PfGG~k~SG~G~~~g~~ 456 (472)
T TIGR03250 377 GPVSPVIRFCDIDDAIRISNSTAYGLSSGVCTNRLDYITRFIAELQVGTVNVWEVPGYRLELTPFGGIKDSGLGYKEGVQ 456 (472)
T ss_pred CCeEEEEEeCCHHHHHHHHhCCCccceEEEEcCCHHHHHHHHHHCCcceEEEcCCCCCCCCCCCCCccccccCCCCCChH
Confidence 99999999999999999999999999999999999999999999999999999876533 45899999999999 56779
Q ss_pred HHHHhhhcccEEEEeC
Q 015031 393 ESLHNYLQVKSVVTPI 408 (414)
Q Consensus 393 ~~~~~~~~~k~i~~~~ 408 (414)
+++++||+.|++++++
T Consensus 457 ~~l~~ft~~k~i~~~~ 472 (472)
T TIGR03250 457 EAMKSFTNLKTYSLPW 472 (472)
T ss_pred HHHHHhhceEEEEEeC
Confidence 9999999999998753
|
It seems reasonably certain then, that this enzyme catalyzes the NAD-dependent oxidation of phosphonoacetaldehyde to phosphonoacetate, bridging the metabolic gap between PhnW and PhnA. We propose the name phosphonoacetaldehyde dehydrogenase and the gene symbol PhnY for this enzyme. |
| >cd07148 ALDH_RL0313 Uncharacterized ALDH ( RL0313) with similarity to Tortula ruralis aldehyde dehydrogenase ALDH21A1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.7e-86 Score=668.32 Aligned_cols=399 Identities=33% Similarity=0.529 Sum_probs=373.1
Q ss_pred CHHHHHHHHHhHHHHHHHHHHHcCCChHHHhhccHHHHHHHHHHHHHhhhhhcCceeccc-----cCccccccccCCcEE
Q 015031 1 MLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMS-----RALQGYTLREPIGVV 75 (414)
Q Consensus 1 L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~P~Gvv 75 (414)
|+++++.|++++++|++++++|+|||..++ ..|+..+++.+++++..+++..+...+.. .+...+.+++|+|||
T Consensus 50 L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a-~~ev~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv 128 (455)
T cd07148 50 LERLADLMEERADELALLIAREGGKPLVDA-KVEVTRAIDGVELAADELGQLGGREIPMGLTPASAGRIAFTTREPIGVV 128 (455)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHcCCCHHHH-HHHHHHHHHHHHHHHHHHHHhcCcccccccccCCCCceEEEEEecceEE
Confidence 578999999999999999999999999975 56999999999999988876654432211 234567889999999
Q ss_pred EEEcCCCcChHhhHHHHHHHHhcCCeEEEecCCCChhHHHHHHHHHHHcCCCCCeEEEEcCCchhHHHHHHhCCCcCeEE
Q 015031 76 GHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVS 155 (414)
Q Consensus 76 ~~i~p~n~P~~~~~~~~~~ALaaGN~vv~kps~~~~~~~~~l~~~~~~aglp~g~v~~~~~~~~~~~~~l~~~~~~~~v~ 155 (414)
++|+|||||+...++++++||++||+||+|||+.+|.++..+.+++.++|+|+|++++++++ .+.++.|+.||++|.|.
T Consensus 129 ~~I~p~N~P~~~~~~~~~~ALaaGN~VvlKps~~~p~~~~~l~~~~~~aGlP~gvv~~v~g~-~~~~~~L~~~~~v~~v~ 207 (455)
T cd07148 129 VAISAFNHPLNLIVHQVAPAIAAGCPVIVKPALATPLSCLAFVDLLHEAGLPEGWCQAVPCE-NAVAEKLVTDPRVAFFS 207 (455)
T ss_pred EEECCCCcHHHHHHHHHHHHHHcCCEEEeeCCCcccHHHHHHHHHHHHcCCCcCcEEEEeCC-hHHHHHHhcCCCCCEEE
Confidence 99999999999999999999999999999999999999999999999999999999999984 46789999999999999
Q ss_pred EeCCHHHHHHHHHHHhhCCCCceeeeCCCCCceeecCCCCHHHHHHHHHHHHhcccCCccccCcEEEEeCccHHHHHHHH
Q 015031 156 FTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKL 235 (414)
Q Consensus 156 ~tGs~~~~~~i~~~~~~~~~~~~~~e~gG~~~~iV~~dadl~~a~~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f~~~l 235 (414)
||||+++|+.|.+.++ . .+|+++|+|||||+||++|||++.|++.+++++|+|+||.|+++++||||++++|+|+++|
T Consensus 208 fTGs~~~G~~i~~~aa-~-~~~~~lElGG~~p~iV~~dADl~~aa~~i~~~~f~~~GQ~C~a~~rv~V~~~i~d~f~~~l 285 (455)
T cd07148 208 FIGSARVGWMLRSKLA-P-GTRCALEHGGAAPVIVDRSADLDAMIPPLVKGGFYHAGQVCVSVQRVFVPAEIADDFAQRL 285 (455)
T ss_pred EECCHHHHHHHHHHhh-c-CCcEEEecCCCCceEECCCCCHHHHHHHHHHHHHhcCCCCccCCeEEEEcHhHHHHHHHHH
Confidence 9999999999999876 4 5899999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhccccCCCCCCCCCccccCCHHHHHHHHHHHHHhhhcCCeEeeCCcccCCCCceeeeEEEEeCCCCCccccccccc
Q 015031 236 VEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIGKKGYYIEPTIFTNVTEDMLIAKNEIFG 315 (414)
Q Consensus 236 ~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fg 315 (414)
+++++++++|+|.++++++||++++.+++++++++++++++|+++++||... .++|++|||+.+++++|++++||+||
T Consensus 286 ~~~~~~~~~g~p~~~~~~~gpli~~~~~~~~~~~i~~a~~~Ga~vl~gg~~~--~~~~~~Ptvl~~~~~~~~~~~eE~Fg 363 (455)
T cd07148 286 AAAAEKLVVGDPTDPDTEVGPLIRPREVDRVEEWVNEAVAAGARLLCGGKRL--SDTTYAPTVLLDPPRDAKVSTQEIFG 363 (455)
T ss_pred HHHHhcCCCCCCCCCCCcCCCCcCHHHHHHHHHHHHHHHhCCCEEEeCCccC--CCCeEcCEEEeCCCCCCHHHhCCCcC
Confidence 9999999999999999999999999999999999999999999999999764 47899999999999999999999999
Q ss_pred ceEEEeeeCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHHhccceeEEEECCcCCCC-CCCCccCCCCCCCCCcchHHH
Q 015031 316 PVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSIRAGIIWINCYFAFD-SDCPYGGYKMSGFGRDCGLES 394 (414)
Q Consensus 316 Pvl~v~~~~~~~eai~~~n~~~~gl~~sv~s~d~~~~~~~~~~l~~g~v~vN~~~~~~-~~~pfgG~~~sG~g~~~g~~~ 394 (414)
||++|++|+|+||||+++|+++|||++||||+|.+.++++++++++|+|+||++.... +.+||||+|.||+|+++|.++
T Consensus 364 Pvl~v~~~~~~deai~~~n~~~~gL~a~i~t~d~~~~~~~~~~~~~g~v~iN~~~~~~~~~~PfgG~k~SG~G~~~g~~~ 443 (455)
T cd07148 364 PVVCVYSYDDLDEAIAQANSLPVAFQAAVFTKDLDVALKAVRRLDATAVMVNDHTAFRVDWMPFAGRRQSGYGTGGIPYT 443 (455)
T ss_pred CeEEEEecCCHHHHHHHHhCCCCCceEEEEcCCHHHHHHHHHHcCcCeEEECCCCCCCCCCCCCCcchhcccCCCchHHH
Confidence 9999999999999999999999999999999999999999999999999999876433 468999999999999999999
Q ss_pred HHhhhcccEEE
Q 015031 395 LHNYLQVKSVV 405 (414)
Q Consensus 395 ~~~~~~~k~i~ 405 (414)
+++|++.|+++
T Consensus 444 ~~~~~~~k~~~ 454 (455)
T cd07148 444 MHDMTQEKMAV 454 (455)
T ss_pred HHHhhceeEEe
Confidence 99999999885
|
Uncharacterized aldehyde dehydrogenase (locus RL0313) with sequence similarity to the moss Tortula ruralis aldehyde dehydrogenase ALDH21A1 (RNP123) believed to play an important role in the detoxification of aldehydes generated in response to desiccation- and salinity-stress, and similar sequences are included in this CD. |
| >cd07106 ALDH_AldA-AAD23400 Streptomyces aureofaciens putative aldehyde dehydrogenase AldA (AAD23400)-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.7e-86 Score=666.31 Aligned_cols=399 Identities=43% Similarity=0.715 Sum_probs=374.8
Q ss_pred CHHHHHHHHHhHHHHHHHHHHHcCCChHHHhhccHHHHHHHHHHHHHhhhhhcCceeccccCccccccccCCcEEEEEcC
Q 015031 1 MLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMSRALQGYTLREPIGVVGHIIP 80 (414)
Q Consensus 1 L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p 80 (414)
|+++++.|++|+++|++++++|+|||..++ ..|+..+++.++++++...+ +.......+...+.+++|+|||++|+|
T Consensus 47 L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a-~~ev~~~~~~l~~~~~~~~~--~~~~~~~~~~~~~~~~~P~GVv~~I~p 123 (446)
T cd07106 47 LLAIADAIEANAEELARLLTLEQGKPLAEA-QFEVGGAVAWLRYTASLDLP--DEVIEDDDTRRVELRRKPLGVVAAIVP 123 (446)
T ss_pred HHHHHHHHHHhHHHHHHHHHHHcCCCHHHH-HHHHHHHHHHHHHHHhhhhc--CccccCCCCceEEEEEEcceEEEEEcC
Confidence 578999999999999999999999999875 46999999999999876532 222222234567899999999999999
Q ss_pred CCcChHhhHHHHHHHHhcCCeEEEecCCCChhHHHHHHHHHHHcCCCCCeEEEEcCCchhHHHHHHhCCCcCeEEEeCCH
Q 015031 81 WNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGST 160 (414)
Q Consensus 81 ~n~P~~~~~~~~~~ALaaGN~vv~kps~~~~~~~~~l~~~~~~aglp~g~v~~~~~~~~~~~~~l~~~~~~~~v~~tGs~ 160 (414)
||||+...++++++||++||+||+|||+.+|.++..+.+++.++ +|+|+++++++ +.+.+..|..|+++|.|.||||+
T Consensus 124 ~N~P~~~~~~~~~~ALaaGN~VilKps~~~p~~~~~l~~~~~~~-lP~g~~~~v~g-~~~~~~~l~~~~~vd~V~fTGs~ 201 (446)
T cd07106 124 WNFPLLLAAWKIAPALLAGNTVVLKPSPFTPLCTLKLGELAQEV-LPPGVLNVVSG-GDELGPALTSHPDIRKISFTGST 201 (446)
T ss_pred CChHHHHHHHHHHHHHHcCCEEEEECCccchHHHHHHHHHHHHh-CCcCeEEEeeC-ChhHHHHHhcCCCCCEEEEECCH
Confidence 99999999999999999999999999999999999999999996 99999999998 45688999999999999999999
Q ss_pred HHHHHHHHHHhhCCCCceeeeCCCCCceeecCCCCHHHHHHHHHHHHhcccCCccccCcEEEEeCccHHHHHHHHHHHHh
Q 015031 161 DVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAK 240 (414)
Q Consensus 161 ~~~~~i~~~~~~~~~~~~~~e~gG~~~~iV~~dadl~~a~~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f~~~l~~~~~ 240 (414)
.+|+.|.+.++ ++++|+++|+||+||+||++|||++.|++.+++++|+|+||.|+++++||||++++|+|+++|+++++
T Consensus 202 ~~g~~v~~~aa-~~~~~~~lElGG~~p~iV~~dADl~~aa~~iv~~~~~~~GQ~C~a~~rv~V~~~v~d~f~~~l~~~~~ 280 (446)
T cd07106 202 ATGKKVMASAA-KTLKRVTLELGGNDAAIVLPDVDIDAVAPKLFWGAFINSGQVCAAIKRLYVHESIYDEFCEALVALAK 280 (446)
T ss_pred HHHHHHHHHHH-hcCCeeEEecCCCCeeEECCCCCHHHHHHHHHHHHHHhcCCCCCCCcEEEEccccHHHHHHHHHHHHH
Confidence 99999999987 88999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccCCCCCCCCCccccCCHHHHHHHHHHHHHhhhcCCeEeeCCcccCCCCceeeeEEEEeCCCCCcccccccccceEEE
Q 015031 241 AWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIGKKGYYIEPTIFTNVTEDMLIAKNEIFGPVMAL 320 (414)
Q Consensus 241 ~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v 320 (414)
++++|+|.++++++||++++.++++++++++++..+|+++++||......|+|++|||+.+++++|+++++|+||||++|
T Consensus 281 ~~~~G~p~~~~~~~gpli~~~~~~~i~~~i~~a~~~ga~~~~gg~~~~~~g~~~~Ptvl~~v~~~~~i~~~E~FgPvl~v 360 (446)
T cd07106 281 AAVVGDGLDPGTTLGPVQNKMQYDKVKELVEDAKAKGAKVLAGGEPLDGPGYFIPPTIVDDPPEGSRIVDEEQFGPVLPV 360 (446)
T ss_pred hcCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCEEEeCCCcCCCCCeeEcCEEEeCCCCCCHHHhcCccCCeEEE
Confidence 99999999999999999999999999999999999999999999875446899999999999999999999999999999
Q ss_pred eeeCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHHhccceeEEEECCcCCCCCCCCccCCCCCCCCCcchHHHHHhhhc
Q 015031 321 MKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSIRAGIIWINCYFAFDSDCPYGGYKMSGFGRDCGLESLHNYLQ 400 (414)
Q Consensus 321 ~~~~~~~eai~~~n~~~~gl~~sv~s~d~~~~~~~~~~l~~g~v~vN~~~~~~~~~pfgG~~~sG~g~~~g~~~~~~~~~ 400 (414)
++|+|+||||+++|++++||++||||+|.+.++++++++++|.|+||++....+.+||||+|.||+|+++|++|+++||+
T Consensus 361 ~~~~~~~eai~~~n~~~~gL~~~i~t~d~~~~~~~~~~~~~G~v~iN~~~~~~~~~pfGG~~~SG~G~~~g~~~~~~~t~ 440 (446)
T cd07106 361 LKYSDEDEVIARANDSEYGLGASVWSSDLERAEAVARRLEAGTVWINTHGALDPDAPFGGHKQSGIGVEFGIEGLKEYTQ 440 (446)
T ss_pred EeeCCHHHHHHHHhCCCCCceEEEECCCHHHHHHHHHhCCccEEEECCCCCCCCCCCCCCccccccCccchHHHHHHhhc
Confidence 99999999999999999999999999999999999999999999999988777889999999999999999999999999
Q ss_pred ccEEE
Q 015031 401 VKSVV 405 (414)
Q Consensus 401 ~k~i~ 405 (414)
+|+++
T Consensus 441 ~k~v~ 445 (446)
T cd07106 441 TQVIN 445 (446)
T ss_pred eeEEe
Confidence 99985
|
Putative aldehyde dehydrogenase, AldA, from Streptomyces aureofaciens (locus AAD23400) and other similar sequences are present in this CD. |
| >cd07152 ALDH_BenzADH NAD-dependent benzaldehyde dehydrogenase II-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.5e-86 Score=665.85 Aligned_cols=399 Identities=38% Similarity=0.616 Sum_probs=374.6
Q ss_pred CHHHHHHHHHhHHHHHHHHHHHcCCChHHHhhccHHHHHHHHHHHHHhhhhhcCceeccccCccccccccCCcEEEEEcC
Q 015031 1 MLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMSRALQGYTLREPIGVVGHIIP 80 (414)
Q Consensus 1 L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p 80 (414)
|+++++.|++|+++|++++++|+||+..++ ..|+..+++.+++++..+++..+...+...+...+.+++|+|||++|+|
T Consensus 41 L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a-~~ev~~~i~~l~~~~~~~~~~~~~~~~~~~g~~~~~~~~P~Gvv~~i~p 119 (443)
T cd07152 41 LRRAADLLEEHADEIADWIVRESGSIRPKA-GFEVGAAIGELHEAAGLPTQPQGEILPSAPGRLSLARRVPLGVVGVISP 119 (443)
T ss_pred HHHHHHHHHHhHHHHHHHHHHhcCCCHHHH-HHHHHHHHHHHHHHHHhHHHhCCccccccCCceeEEEEecceEEEEECC
Confidence 578999999999999999999999999865 5699999999999998766554443333345567889999999999999
Q ss_pred CCcChHhhHHHHHHHHhcCCeEEEecCCCChhHH-HHHHHHHHHcCCCCCeEEEEcCCchhHHHHHHhCCCcCeEEEeCC
Q 015031 81 WNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIA-LYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGS 159 (414)
Q Consensus 81 ~n~P~~~~~~~~~~ALaaGN~vv~kps~~~~~~~-~~l~~~~~~aglp~g~v~~~~~~~~~~~~~l~~~~~~~~v~~tGs 159 (414)
||||++..++++++||++||+||+|||+.+|.++ ..+.++|.++|+|+|++|++++ +.+.+..|+.|+++|.|.||||
T Consensus 120 ~N~P~~~~~~~~~~ALaaGN~VvlKps~~~p~~~~~~l~~~~~~ag~P~gvv~~v~g-~~~~~~~l~~~~~v~~V~fTGs 198 (443)
T cd07152 120 FNFPLILAMRSVAPALALGNAVVLKPDPRTPVSGGVVIARLFEEAGLPAGVLHVLPG-GADAGEALVEDPNVAMISFTGS 198 (443)
T ss_pred CCcHHHHHHHHHHHHHHcCCEEEEECCcccchhHHHHHHHHHHHhCcCcCcEEEecC-ChHHHHHHhcCCCCCEEEEECC
Confidence 9999999999999999999999999999999996 7899999999999999999998 5678999999999999999999
Q ss_pred HHHHHHHHHHHhhCCCCceeeeCCCCCceeecCCCCHHHHHHHHHHHHhcccCCccccCcEEEEeCccHHHHHHHHHHHH
Q 015031 160 TDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKA 239 (414)
Q Consensus 160 ~~~~~~i~~~~~~~~~~~~~~e~gG~~~~iV~~dadl~~a~~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f~~~l~~~~ 239 (414)
+.+|+.|.+.++ ++++|+++|+|||||+||++|||++.|++.+++++|.|+||.|+++++||||++++|+|+++|++++
T Consensus 199 ~~~g~~i~~~aa-~~~~~~~lElGGk~~~iV~~dAdl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~~~f~~~l~~~~ 277 (443)
T cd07152 199 TAVGRKVGEAAG-RHLKKVSLELGGKNALIVLDDADLDLAASNGAWGAFLHQGQICMAAGRHLVHESVADAYTAKLAAKA 277 (443)
T ss_pred HHHHHHHHHHHH-hcCCcEEEECCCCCeEEECCCCCHHHHHHHHHHHHHhhcCCCCcCCeeEEEcHHHHHHHHHHHHHHH
Confidence 999999999887 7899999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hccccCCCCCCCCCccccCCHHHHHHHHHHHHHhhhcCCeEeeCCcccCCCCceeeeEEEEeCCCCCcccccccccceEE
Q 015031 240 KAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIGKKGYYIEPTIFTNVTEDMLIAKNEIFGPVMA 319 (414)
Q Consensus 240 ~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~ 319 (414)
+++++|+|.++++.+||++++.+++++.+++++++++|+++++||.. +|+|++|||+.+++++|++++||+||||++
T Consensus 278 ~~~~~g~p~~~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~vl~gg~~---~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~ 354 (443)
T cd07152 278 KHLPVGDPATGQVALGPLINARQLDRVHAIVDDSVAAGARLEAGGTY---DGLFYRPTVLSGVKPGMPAFDEEIFGPVAP 354 (443)
T ss_pred HhCCCCCCCCCCCCcCCCcCHHHHHHHHHHHHHHHhCCCEEEeccCc---CCEEEcCEEEecCCCCChhhhccccCCeEE
Confidence 99999999999999999999999999999999999999999999974 589999999999999999999999999999
Q ss_pred EeeeCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHHhccceeEEEECCcCCCC-CCCCccCCCCCCCC-CcchHHHHHh
Q 015031 320 LMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSIRAGIIWINCYFAFD-SDCPYGGYKMSGFG-RDCGLESLHN 397 (414)
Q Consensus 320 v~~~~~~~eai~~~n~~~~gl~~sv~s~d~~~~~~~~~~l~~g~v~vN~~~~~~-~~~pfgG~~~sG~g-~~~g~~~~~~ 397 (414)
|++|+|.||||+++|+++|||++||||+|.+.++++++++++|+|+||++.... +.+||||+|.||+| +.+|++++++
T Consensus 355 v~~~~~~~eai~~~n~~~~gL~a~v~t~d~~~a~~~~~~l~~G~v~iN~~~~~~~~~~pfGG~~~SG~G~~~~g~~~l~~ 434 (443)
T cd07152 355 VTVFDSDEEAVALANDTEYGLSAGIISRDVGRAMALADRLRTGMLHINDQTVNDEPHNPFGGMGASGNGSRFGGPANWEE 434 (443)
T ss_pred EEeeCCHHHHHHHHhCCCccceEEEECCCHHHHHHHHHhCCcCeEEECCCCCCCCCCCCCCCcccccCCCccCcHHHHHH
Confidence 999999999999999999999999999999999999999999999999877643 67999999999999 7889999999
Q ss_pred hhcccEEE
Q 015031 398 YLQVKSVV 405 (414)
Q Consensus 398 ~~~~k~i~ 405 (414)
||++|+++
T Consensus 435 ~~~~k~~~ 442 (443)
T cd07152 435 FTQWQWVT 442 (443)
T ss_pred hhceeEEe
Confidence 99999875
|
NAD-dependent, benzaldehyde dehydrogenase II (XylC, BenzADH, EC=1.2.1.28) is involved in the oxidation of benzyl alcohol to benzoate. In Acinetobacter calcoaceticus, this process is carried out by the chromosomally encoded, benzyl alcohol dehydrogenase (xylB) and benzaldehyde dehydrogenase II (xylC) enzymes; whereas in Pseudomonas putida they are encoded by TOL plasmids. |
| >TIGR01237 D1pyr5carbox2 delta-1-pyrroline-5-carboxylate dehydrogenase, group 2, putative | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.3e-86 Score=674.55 Aligned_cols=406 Identities=32% Similarity=0.551 Sum_probs=378.0
Q ss_pred CHHHHHHHHHhHHHHHHHHHHHcCCChHHHhhccHHHHHHHHHHHHHhhhhhcCceecc-ccCccccccccCCcEEEEEc
Q 015031 1 MLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKM-SRALQGYTLREPIGVVGHII 79 (414)
Q Consensus 1 L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~~~~~~~~~~~~-~~~~~~~~~~~P~Gvv~~i~ 79 (414)
|+++++.|++++++|++++++|+|||..++ ..|+..+++.++++++.+++..+..... ..+...+++++|+|||++|+
T Consensus 97 L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a-~~ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVV~~I~ 175 (511)
T TIGR01237 97 LRKAAAIMERRRHELNALICLEVGKIIPEA-DAEVAEAIDFCEYYAREMERLAGQGVNLDIEGETNRYFYQPRGVAVVIS 175 (511)
T ss_pred HHHHHHHHHHCHHHHHHHHHHHcCCCHHHH-HHHHHHHHHHHHHHHHHHHHhcCccccCCCCCceeEEEEecceeEEEEC
Confidence 578999999999999999999999999975 5699999999999999887765433221 23556788999999999999
Q ss_pred CCCcChHhhHHHHHHHHhcCCeEEEecCCCChhHHHHHHHHHHHcCCCCCeEEEEcCCchhHHHHHHhCCCcCeEEEeCC
Q 015031 80 PWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGS 159 (414)
Q Consensus 80 p~n~P~~~~~~~~~~ALaaGN~vv~kps~~~~~~~~~l~~~~~~aglp~g~v~~~~~~~~~~~~~l~~~~~~~~v~~tGs 159 (414)
|||||+...++++++||++||+||+|||+.+|+++..+.+++.++|+|+|++|++++++.+.++.|+.||+++.|.||||
T Consensus 176 P~N~P~~~~~~~i~~ALaaGN~VVlKPs~~tp~~~~~l~~~~~~aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~V~fTGs 255 (511)
T TIGR01237 176 PWNFPMAIAVGMTVAPIVTGNCVVLKPAETSTVIAAKIVEILIEAGLPPGVFQFVPGKGSEVGSYLVNHPKTHLITFTGS 255 (511)
T ss_pred CCCcHHHHHHHHHHHHHHcCCEEEEECCCCCcHHHHHHHHHHHHhCCCCCcEEEccCCCchhHHHHhcCCCCCeEEEECc
Confidence 99999999999999999999999999999999999999999999999999999999977788999999999999999999
Q ss_pred HHHHHHHHHHHhh-----CCCCceeeeCCCCCceeecCCCCHHHHHHHHHHHHhcccCCccccCcEEEEeCccHHHHHHH
Q 015031 160 TDVGRQVMQAAAT-----SNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKK 234 (414)
Q Consensus 160 ~~~~~~i~~~~~~-----~~~~~~~~e~gG~~~~iV~~dadl~~a~~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f~~~ 234 (414)
+.+|+.|.+.++. ++++|+++|+|||||+||++|||++.|++.+++++|.|+||.|+++++||||++++|+|+++
T Consensus 256 ~~~G~~i~~~aa~~~~~~~~~~~~~lElgG~~p~iV~~dAdl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~d~f~~~ 335 (511)
T TIGR01237 256 REVGCRIYEDAAKVQPGQKHLKRVIAEMGGKDAIIVDESADIEQAVAGAVYSAFGFTGQKCSACSRVVVLSPVYDAVVER 335 (511)
T ss_pred hHHHHHHHHHHhcccccccccceeEeccCCCCeEEECCCCCHHHHHHHHHHHHHhcCCCCcccceEEEEehhHHHHHHHH
Confidence 9999999988763 37899999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhccccCCCCCCCCCccccCCHHHHHHHHHHHHHhhhcCCeEeeCCcccCCCCceeeeEEEEeCCCCCcccccccc
Q 015031 235 LVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIGKKGYYIEPTIFTNVTEDMLIAKNEIF 314 (414)
Q Consensus 235 l~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~f 314 (414)
|+++++++++|+|.++.+++||++++.+++++++++++++++| ++++||....+.|+|++|||+.+++++|++++||+|
T Consensus 336 L~~~~~~l~~g~~~~~~~~~gpli~~~~~~~v~~~i~~a~~~g-~~l~gg~~~~~~g~~~~Ptvl~~~~~~~~i~~eE~F 414 (511)
T TIGR01237 336 FVEATRSLNVGPTDDPSTQVGPVIDQKSQAKIQEYIEQGKAEG-ELAIGGCDAPSEGYFIGPTIFKDVDRHARLAQEEIF 414 (511)
T ss_pred HHHHHHhCCCCCCCCCCCcCCCCCCHHHHHHHHHHHHHHHHCC-cEEECCccCCCCCeEEcCEEEeCCCCCChHhhCCCc
Confidence 9999999999999999999999999999999999999999888 889998765446899999999999999999999999
Q ss_pred cceEEEeeeCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHHhccceeEEEECCcCCC--CCCCCccCCCCCCCCC-cch
Q 015031 315 GPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSIRAGIIWINCYFAF--DSDCPYGGYKMSGFGR-DCG 391 (414)
Q Consensus 315 gPvl~v~~~~~~~eai~~~n~~~~gl~~sv~s~d~~~~~~~~~~l~~g~v~vN~~~~~--~~~~pfgG~~~sG~g~-~~g 391 (414)
|||++|++|+|+||||+++|+++|||++||||+|.+.+.++++++++|+|+||+.... .+.+||||+|.||+|+ .+|
T Consensus 415 gPVl~v~~~~~~deai~~~n~~~~gL~a~i~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~~~PfGG~k~SG~G~~~~g 494 (511)
T TIGR01237 415 GPVVAIIRAADFDEALEIANGTEYGLTGGVYSNTRDHIERAAAEFEVGNLYFNRTITGAIVGRQPFGGFKMSGTDSKAGG 494 (511)
T ss_pred CCeEEEEeeCCHHHHHHHHhCCCCCCeEEEEcCCHHHHHHHHHhCCcceEEECCCCCCCCCCCCCCCccccccCCCcCCC
Confidence 9999999999999999999999999999999999999999999999999999987652 3568999999999995 789
Q ss_pred HHHHHhhhcccEEEEeC
Q 015031 392 LESLHNYLQVKSVVTPI 408 (414)
Q Consensus 392 ~~~~~~~~~~k~i~~~~ 408 (414)
++++++||++|+++.++
T Consensus 495 ~~~l~~~~~~k~v~~~~ 511 (511)
T TIGR01237 495 PDYLLQFMQPKTVTENI 511 (511)
T ss_pred HHHHHHhcceEEEEEeC
Confidence 99999999999998754
|
This enzyme is the second of two in the degradation of proline to glutamate. This model represents one of several related branches of delta-1-pyrroline-5-carboxylate dehydrogenase. Members of this branch may be associated with proline dehydrogenase (the other enzyme of the pathway from proline to glutamate) but have not been demonstrated experimentally. The branches are not as closely related to each other as some distinct aldehyde dehydrogenases are to some; separate models were built to let each model describe a set of equivalogs. |
| >cd07101 ALDH_SSADH2_GabD2 Mycobacterium tuberculosis succinate-semialdehyde dehydrogenase 2-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.3e-86 Score=667.17 Aligned_cols=402 Identities=37% Similarity=0.609 Sum_probs=373.9
Q ss_pred CHHHHHHHHHhHHHHHHHHHHHcCCChHHHhhccHHHHHHHHHHHHHhhhhhcCcee-cc--ccCccccccccCCcEEEE
Q 015031 1 MLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVL-KM--SRALQGYTLREPIGVVGH 77 (414)
Q Consensus 1 L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~~~~~~~~~~-~~--~~~~~~~~~~~P~Gvv~~ 77 (414)
|+++++.|++|+++|++++++|+||+..++ ..|+..+++.+++++..+++...... .. ......+.+++|+|||++
T Consensus 46 L~~~a~~l~~~~~el~~~~~~e~Gk~~~~a-~~ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GvV~~ 124 (454)
T cd07101 46 FLRFHDLVLERRDELLDLIQLETGKARRHA-FEEVLDVAIVARYYARRAERLLKPRRRRGAIPVLTRTTVNRRPKGVVGV 124 (454)
T ss_pred HHHHHHHHHHhHHHHHHHHHHHcCCcHHHH-HHHHHHHHHHHHHHHHHHHHHhCCccccccCCCCceEEEEEEeccEEEE
Confidence 578999999999999999999999999975 57999999999999988766543321 11 112456889999999999
Q ss_pred EcCCCcChHhhHHHHHHHHhcCCeEEEecCCCChhHHHHHHHHHHHcCCCCCeEEEEcCCchhHHHHHHhCCCcCeEEEe
Q 015031 78 IIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFT 157 (414)
Q Consensus 78 i~p~n~P~~~~~~~~~~ALaaGN~vv~kps~~~~~~~~~l~~~~~~aglp~g~v~~~~~~~~~~~~~l~~~~~~~~v~~t 157 (414)
|+|||||+...++++++||++||+||+|||+.+|.++..+.+++.++|+|+|++|++++++.+.++.|++| +|.|.||
T Consensus 125 I~p~N~P~~~~~~~~~~ALaaGN~vvlKps~~~p~~~~~l~~~~~~aglP~gv~~~v~g~~~~~~~~l~~~--~~~V~fT 202 (454)
T cd07101 125 ISPWNYPLTLAVSDAIPALLAGNAVVLKPDSQTALTALWAVELLIEAGLPRDLWQVVTGPGSEVGGAIVDN--ADYVMFT 202 (454)
T ss_pred ECCCccHHHHHHHHHHHHHHcCCEEEEECCccchHHHHHHHHHHHHcCcCCCcEEEEeCCcHHHHHHHHhC--CCEEEEE
Confidence 99999999999999999999999999999999999999999999999999999999999887888999976 6889999
Q ss_pred CCHHHHHHHHHHHhhCCCCceeeeCCCCCceeecCCCCHHHHHHHHHHHHhcccCCccccCcEEEEeCccHHHHHHHHHH
Q 015031 158 GSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVE 237 (414)
Q Consensus 158 Gs~~~~~~i~~~~~~~~~~~~~~e~gG~~~~iV~~dadl~~a~~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f~~~l~~ 237 (414)
||+.+|+.|.+.++ ++++|+++|+||+||+||++|||++.|++.+++++|.|+||.|+++++||||++++|+|+++|++
T Consensus 203 Gs~~~g~~i~~~aa-~~~~~~~lElgG~~p~iV~~dAdl~~a~~~i~~~~~~~sGQ~C~a~~rv~V~~~i~d~f~~~L~~ 281 (454)
T cd07101 203 GSTATGRVVAERAG-RRLIGCSLELGGKNPMIVLEDADLDKAAAGAVRACFSNAGQLCVSIERIYVHESVYDEFVRRFVA 281 (454)
T ss_pred CCHHHHHHHHHHHH-hcCCcEEEECCCCceEEECCCCCHHHHHHHHHHHHHhcCCCCcccCeEEEEcHHHHHHHHHHHHH
Confidence 99999999999987 78899999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhccccCCCCCCCCCccccCCHHHHHHHHHHHHHhhhcCCeEeeCCcccC-CCCceeeeEEEEeCCCCCcccccccccc
Q 015031 238 KAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIG-KKGYYIEPTIFTNVTEDMLIAKNEIFGP 316 (414)
Q Consensus 238 ~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~-~~g~~~~Ptvl~~~~~~~~~~~~E~fgP 316 (414)
+++++++|+|.++++++||++++.+++++++++++++++|+++++||.... .+|+|++|||+.+++++|++++||+|||
T Consensus 282 ~~~~~~~G~~~~~~~~~gpli~~~~~~~v~~~v~~a~~~Ga~vl~gg~~~~~~~~~~~~Ptvl~~v~~~~~~~~eE~FgP 361 (454)
T cd07101 282 RTRALRLGAALDYGPDMGSLISQAQLDRVTAHVDDAVAKGATVLAGGRARPDLGPYFYEPTVLTGVTEDMELFAEETFGP 361 (454)
T ss_pred HHhhCCCCCCCCCCCCcCCCCCHHHHHHHHHHHHHHHHCCCEEEeCCCCCCCCCCeEEcCEEEeCCCCCCHHHhCCCCCc
Confidence 999999999999999999999999999999999999999999999987532 3579999999999999999999999999
Q ss_pred eEEEeeeCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHHhccceeEEEECCcCC---CCCCCCccCCCCCCCCCcchHH
Q 015031 317 VMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSIRAGIIWINCYFA---FDSDCPYGGYKMSGFGRDCGLE 393 (414)
Q Consensus 317 vl~v~~~~~~~eai~~~n~~~~gl~~sv~s~d~~~~~~~~~~l~~g~v~vN~~~~---~~~~~pfgG~~~sG~g~~~g~~ 393 (414)
|++|++|+|.||||+++|++++||++||||+|.+.++++++++++|+|+||++.. ..+.+||||+|.||+|+++|.+
T Consensus 362 vl~v~~~~~~~eai~~~n~~~~gL~~~i~t~d~~~a~~~~~~l~~G~v~iN~~~~~~~~~~~~PfgG~k~SG~G~~~g~~ 441 (454)
T cd07101 362 VVSIYRVADDDEAIELANDTDYGLNASVWTRDGARGRRIAARLRAGTVNVNEGYAAAWASIDAPMGGMKDSGLGRRHGAE 441 (454)
T ss_pred eEEEEeeCCHHHHHHHHhCCCCCceEEEEcCCHHHHHHHHHhcCcceEEECCCCCcCcCCCCCCCCcccccccCccchHH
Confidence 9999999999999999999999999999999999999999999999999998754 3467899999999999999999
Q ss_pred HHHhhhcccEEEE
Q 015031 394 SLHNYLQVKSVVT 406 (414)
Q Consensus 394 ~~~~~~~~k~i~~ 406 (414)
|+++||+.|++++
T Consensus 442 ~~~~~~~~k~v~~ 454 (454)
T cd07101 442 GLLKYTETQTVAV 454 (454)
T ss_pred HHHHhcceEEEeC
Confidence 9999999999863
|
Succinate-semialdehyde dehydrogenase 2 (SSADH2) and similar proteins are in this CD. SSADH1 (GabD1, EC=1.2.1.16) catalyzes the NADP(+)-dependent oxidation of succinate semialdehyde to succinate. SSADH activity in Mycobacterium tuberculosis is encoded by both gabD1 (Rv0234c) and gabD2 (Rv1731), however ,the Vmax of GabD1 was shown to be much higher than that of GabD2, and GabD2 (SSADH2) is likely to serve physiologically as a dehydrogenase for a different aldehyde(s). |
| >cd07088 ALDH_LactADH-AldA Escherichia coli lactaldehyde dehydrogenase AldA-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.9e-86 Score=669.71 Aligned_cols=403 Identities=43% Similarity=0.692 Sum_probs=380.2
Q ss_pred CHHHHHHHHHhHHHHHHHHHHHcCCChHHHhhccHHHHHHHHHHHHHhhhhhcCceeccc-cCccccccccCCcEEEEEc
Q 015031 1 MLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMS-RALQGYTLREPIGVVGHII 79 (414)
Q Consensus 1 L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~-~~~~~~~~~~P~Gvv~~i~ 79 (414)
|+++++.|++++++|++++++|+|||..++ ..|+..+++.+++++.++.+..+...+.. .+...+.+++|+|||++|+
T Consensus 63 L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a-~~ev~~~~~~l~~~~~~a~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~I~ 141 (468)
T cd07088 63 LRKLADLIRENADELAKLIVEEQGKTLSLA-RVEVEFTADYIDYMAEWARRIEGEIIPSDRPNENIFIFKVPIGVVAGIL 141 (468)
T ss_pred HHHHHHHHHHhHHHHHHHHHHhcCCCHHHH-HHHHHHHHHHHHHHHHHHHHhCCccccCccccceeEEEEecceeEEEEc
Confidence 578999999999999999999999999975 57999999999999998876655443332 3556788999999999999
Q ss_pred CCCcChHhhHHHHHHHHhcCCeEEEecCCCChhHHHHHHHHHHHcCCCCCeEEEEcCCchhHHHHHHhCCCcCeEEEeCC
Q 015031 80 PWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGS 159 (414)
Q Consensus 80 p~n~P~~~~~~~~~~ALaaGN~vv~kps~~~~~~~~~l~~~~~~aglp~g~v~~~~~~~~~~~~~l~~~~~~~~v~~tGs 159 (414)
|||||+...++++++||++||+||+|||+.+|.++..+.+++.++|+|+|++|++++++.+.++.|+.|+++|.|.||||
T Consensus 142 p~N~P~~~~~~~~~~AL~aGN~VVlKps~~~p~~~~~l~~~~~~aglP~gvv~~v~g~~~~~~~~l~~~~~v~~V~ftGs 221 (468)
T cd07088 142 PWNFPFFLIARKLAPALVTGNTIVIKPSEETPLNALEFAELVDEAGLPAGVLNIVTGRGSVVGDALVAHPKVGMISLTGS 221 (468)
T ss_pred cCchHHHHHHHHHHHHHHcCCEEEEECCCcchHHHHHHHHHHHHcCcCccceEEEecCchHHHHHHhcCCCCCEEEEECc
Confidence 99999999999999999999999999999999999999999999999999999999977778899999999999999999
Q ss_pred HHHHHHHHHHHhhCCCCceeeeCCCCCceeecCCCCHHHHHHHHHHHHhcccCCccccCcEEEEeCccHHHHHHHHHHHH
Q 015031 160 TDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKA 239 (414)
Q Consensus 160 ~~~~~~i~~~~~~~~~~~~~~e~gG~~~~iV~~dadl~~a~~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f~~~l~~~~ 239 (414)
+.+|+.|.+.++ ++++|+++|+|||||+||++|||++.|++.+++++|.|+||.|+++++||||++++|+|+++|++++
T Consensus 222 ~~~g~~i~~~aa-~~~~~~~lelGG~~~~iV~~dadl~~aa~~iv~~~~~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~ 300 (468)
T cd07088 222 TEAGQKIMEAAA-ENITKVSLELGGKAPAIVMKDADLDLAVKAIVDSRIINCGQVCTCAERVYVHEDIYDEFMEKLVEKM 300 (468)
T ss_pred HHHHHHHHHHHH-hcCCcEEEECCCCCeEEECCCCCHHHHHHHHHHHHhcccCcCCcCCeEEEEcHHHHHHHHHHHHHHH
Confidence 999999999987 8899999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hccccCCCCCCCCCccccCCHHHHHHHHHHHHHhhhcCCeEeeCCcccC-CCCceeeeEEEEeCCCCCcccccccccceE
Q 015031 240 KAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIG-KKGYYIEPTIFTNVTEDMLIAKNEIFGPVM 318 (414)
Q Consensus 240 ~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~-~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl 318 (414)
+++++|+|.++++.+||++++.+++++++++++++++|+++++||.... +.|+|++|||+.+++++|.++++|+||||+
T Consensus 301 ~~~~~g~p~~~~~~~gpli~~~~~~~~~~~i~~a~~~ga~vl~gg~~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl 380 (468)
T cd07088 301 KAVKVGDPFDAATDMGPLVNEAALDKVEEMVERAVEAGATLLTGGKRPEGEKGYFYEPTVLTNVRQDMEIVQEEIFGPVL 380 (468)
T ss_pred HhcCCCCCCCCCCccCcccCHHHHHHHHHHHHHHHHCCCEEEeCCCCCCCCCceeEcCEEEecCCCCCchhhCCCcCCeE
Confidence 9999999999999999999999999999999999999999999997653 368999999999999999999999999999
Q ss_pred EEeeeCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHHhccceeEEEECCcCCCCCCCCccCCCCCCCCCcchHHHHHhh
Q 015031 319 ALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSIRAGIIWINCYFAFDSDCPYGGYKMSGFGRDCGLESLHNY 398 (414)
Q Consensus 319 ~v~~~~~~~eai~~~n~~~~gl~~sv~s~d~~~~~~~~~~l~~g~v~vN~~~~~~~~~pfgG~~~sG~g~~~g~~~~~~~ 398 (414)
+|++|+|+||||+++|+++|||++||||+|.+.++++++++++|+|+||++.......||||+|.||+|+++|++|+++|
T Consensus 381 ~v~~~~~~~eai~~~n~~~~gL~~~v~t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~p~gG~k~SG~G~~~g~~~l~~~ 460 (468)
T cd07088 381 PVVKFSSLDEAIELANDSEYGLTSYIYTENLNTAMRATNELEFGETYINRENFEAMQGFHAGWKKSGLGGADGKHGLEEY 460 (468)
T ss_pred EEEecCCHHHHHHHHhCCCCCceEEEECCCHHHHHHHHHhCCcceEEECCCCCCCCCCCcCCcccccCCcCchHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999876556679999999999999999999999
Q ss_pred hcccEEE
Q 015031 399 LQVKSVV 405 (414)
Q Consensus 399 ~~~k~i~ 405 (414)
|+.|+++
T Consensus 461 t~~k~v~ 467 (468)
T cd07088 461 LQTKVVY 467 (468)
T ss_pred hceeEEe
Confidence 9999885
|
Lactaldehyde dehydrogenase from Escherichia coli (AldA, LactADH, EC=1.2.1.22), an NAD(+)-dependent enzyme involved in the metabolism of L-fucose and L-rhamnose, and other similar sequences are present in this CD. |
| >cd07123 ALDH_F4-17_P5CDH Delta(1)-pyrroline-5-carboxylate dehydrogenase, ALDH families 4 and 17 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-85 Score=673.94 Aligned_cols=405 Identities=28% Similarity=0.443 Sum_probs=373.7
Q ss_pred CHHHHHHHHH-hHHHHHHHHHHHcCCChHHHhhccHHHHHHHHHHHHHhhhhhcCceecc-ccCccccccccCC-cEEEE
Q 015031 1 MLKFADLIEE-HAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKM-SRALQGYTLREPI-GVVGH 77 (414)
Q Consensus 1 L~~~a~~l~~-~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~~~~~~~~~~~~-~~~~~~~~~~~P~-Gvv~~ 77 (414)
|+++++.|++ ++++|++++++|+|||..++...|+...++.+++++.++.+..+..... ..+...+++++|+ |||++
T Consensus 97 L~~~a~~l~~~~~~ela~~~~~e~Gk~~~~a~~~~v~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~~GVv~~ 176 (522)
T cd07123 97 FLKAADLLSGKYRYELNAATMLGQGKNVWQAEIDAACELIDFLRFNVKYAEELYAQQPLSSPAGVWNRLEYRPLEGFVYA 176 (522)
T ss_pred HHHHHHHHHhhCHHHHHHHHHHhcCCCHHHHhHHHHHHHHHHHHHHHHHHHHhcCccccCCCCCceeEEEEecCCceEEE
Confidence 5789999996 8999999999999999987655688899999999998877665432221 2245678899998 99999
Q ss_pred EcCCCcChHhhHHHHHHHHhcCCeEEEecCCCChhHHHHHHHHHHHcCCCCCeEEEEcCCchhHHHHHHhCCCcCeEEEe
Q 015031 78 IIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFT 157 (414)
Q Consensus 78 i~p~n~P~~~~~~~~~~ALaaGN~vv~kps~~~~~~~~~l~~~~~~aglp~g~v~~~~~~~~~~~~~l~~~~~~~~v~~t 157 (414)
|+|||||+....+++++|| +||+||+|||+.+|+++..+.+++.++|+|+|++|+++|++.+.+..|+.|++++.|.||
T Consensus 177 I~PwNfP~~~~~~~~~pal-aGN~VVlKPs~~tp~~~~~l~~~l~~aGlP~gvv~vv~g~~~~~g~~L~~~~~v~~V~FT 255 (522)
T cd07123 177 VSPFNFTAIGGNLAGAPAL-MGNVVLWKPSDTAVLSNYLVYKILEEAGLPPGVINFVPGDGPVVGDTVLASPHLAGLHFT 255 (522)
T ss_pred ECCcccHHHHHHHHHHHHH-hCCEEEEECCCCCCHHHHHHHHHHHHcCcCCCcEEEEecCchHHHHHHhcCCCcCEEEEE
Confidence 9999999999999999999 699999999999999999999999999999999999999777789999999999999999
Q ss_pred CCHHHHHHHHHHHhhCCCC------ceeeeCCCCCceeecCCCCHHHHHHHHHHHHhcccCCccccCcEEEEeCccHHHH
Q 015031 158 GSTDVGRQVMQAAATSNLK------PVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEF 231 (414)
Q Consensus 158 Gs~~~~~~i~~~~~~~~~~------~~~~e~gG~~~~iV~~dadl~~a~~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f 231 (414)
||+++|+.|.+.++ ++++ |+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|
T Consensus 256 GS~~~G~~i~~~aa-~~l~~~~~~~~v~lElGGkn~~IV~~dAdl~~Aa~~i~~~~f~~aGQ~C~a~~rv~V~~~i~d~f 334 (522)
T cd07123 256 GSTPTFKSLWKQIG-ENLDRYRTYPRIVGETGGKNFHLVHPSADVDSLVTATVRGAFEYQGQKCSAASRAYVPESLWPEV 334 (522)
T ss_pred CCHHHHHHHHHHHH-hhcccccccCCEEEECCCCCeeEECCCCCHHHHHHHHHHHHHhcCCCCCCCCcEEEEcHHHHHHH
Confidence 99999999999988 6665 8999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhccccCCCCCCCCCccccCCHHHHHHHHHHHHHhhhc-CCeEeeCCcccCCCCceeeeEEEEeCCCCCcccc
Q 015031 232 EKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKRE-GATLLTGGKPIGKKGYYIEPTIFTNVTEDMLIAK 310 (414)
Q Consensus 232 ~~~l~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~-ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~ 310 (414)
+++|+++++++++|+|.|+++++||++++++++++++++++++++ |+++++||....++|+|++|||+.+++++|++++
T Consensus 335 ~~~l~~~~~~l~~G~p~d~~t~~Gpli~~~~~~~v~~~v~~a~~~~Ga~vl~gg~~~~~~g~f~~PTvl~~v~~~~~i~~ 414 (522)
T cd07123 335 KERLLEELKEIKMGDPDDFSNFMGAVIDEKAFDRIKGYIDHAKSDPEAEIIAGGKCDDSVGYFVEPTVIETTDPKHKLMT 414 (522)
T ss_pred HHHHHHHHhhCccCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEeCCCcCCCCCceEcCEEEeCCCCCChhhh
Confidence 999999999999999999999999999999999999999999999 9999999976544689999999999999999999
Q ss_pred cccccceEEEeeeCC--HHHHHHHHhcCC-CCceEEEecCCHHHHHHHHhcc--ceeEEEECCcCCC--CCCCCccCCCC
Q 015031 311 NEIFGPVMALMKFKT--VEEAIKSANNTR-YGLAAGIMTKDLNVANTVSRSI--RAGIIWINCYFAF--DSDCPYGGYKM 383 (414)
Q Consensus 311 ~E~fgPvl~v~~~~~--~~eai~~~n~~~-~gl~~sv~s~d~~~~~~~~~~l--~~g~v~vN~~~~~--~~~~pfgG~~~ 383 (414)
||+||||++|++|+| +||||+++|++. |||++||||+|.+.+.++++++ ++|.|+||+.... .+.+||||+|.
T Consensus 415 eEiFGPVl~V~~~~~~~~~eai~~aN~~~~~gL~a~Vft~d~~~~~~~~~~l~~~~G~v~iN~~~~~~~~~~~PfGG~k~ 494 (522)
T cd07123 415 EEIFGPVLTVYVYPDSDFEETLELVDTTSPYALTGAIFAQDRKAIREATDALRNAAGNFYINDKPTGAVVGQQPFGGARA 494 (522)
T ss_pred cCCCCCeEEEEEeCCCCHHHHHHHHhCCCCcCceEEEEeCCHHHHHHHHHhhhhcCcEEEECCCCCCCCCCCCCCCcchh
Confidence 999999999999994 799999999984 9999999999999999999997 5999999987652 35789999999
Q ss_pred CCCC-CcchHHHHHhhhcccEEEEe
Q 015031 384 SGFG-RDCGLESLHNYLQVKSVVTP 407 (414)
Q Consensus 384 sG~g-~~~g~~~~~~~~~~k~i~~~ 407 (414)
||+| +++|.+++++|++.|+++..
T Consensus 495 SG~gg~~~g~~~l~~~~~~k~~~~~ 519 (522)
T cd07123 495 SGTNDKAGSPLNLLRWVSPRTIKET 519 (522)
T ss_pred cCCCcccCCHHHHHHhcceEEEEEe
Confidence 9996 99999999999999998764
|
Delta(1)-pyrroline-5-carboxylate dehydrogenase (EC=1.5.1.12 ), families 4 and 17: a proline catabolic enzyme of the aldehyde dehydrogenase (ALDH) protein superfamily. Delta(1)-pyrroline-5-carboxylate dehydrogenase (P5CDH), also known as ALDH4A1 in humans, is a mitochondrial homodimer involved in proline degradation and catalyzes the NAD + -dependent conversion of P5C to glutamate. This is a necessary step in the pathway interconnecting the urea and tricarboxylic acid cycles. The preferred substrate is glutamic gamma-semialdehyde, other substrates include succinic, glutaric and adipic semialdehydes. Also included in this CD is the Aldh17 Drosophila melanogaster (Q9VUC0) P5CDH and similar sequences. |
| >TIGR01236 D1pyr5carbox1 delta-1-pyrroline-5-carboxylate dehydrogenase, group 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-85 Score=672.80 Aligned_cols=406 Identities=27% Similarity=0.423 Sum_probs=374.6
Q ss_pred CHHHHHHHH-HhHHHHHHHHHHHcCCChHHHhhccHHHHHHHHHHHHHhhhhhcCcee-ccccCccccccccCC-cEEEE
Q 015031 1 MLKFADLIE-EHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVL-KMSRALQGYTLREPI-GVVGH 77 (414)
Q Consensus 1 L~~~a~~l~-~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~~~~~~~~~~-~~~~~~~~~~~~~P~-Gvv~~ 77 (414)
|+++++.|+ +++++|++++++|+||+..++...++..+++.+++++.++++..+... ....+..+++.++|+ |||++
T Consensus 97 L~k~a~~l~~~~~~~la~~~~~e~GK~~~~a~~e~v~~~i~~~~~~a~~a~~~~~~~~~~~~~~~~~~~~~~P~~GVv~~ 176 (533)
T TIGR01236 97 FLKAADLLSGPYREEILAATMLGQSKNVYQAEIDAVAELIDFFRFNVKYARELYEQQPSESAPGEWNRTDYRPLEGFVYA 176 (533)
T ss_pred HHHHHHHHHhhcHHHHHHHHHHHcCCcHHHHhHhHHHHHHHHHHHHHHHHHHhcCccccCCCCCceeEEEEecCCCEEEE
Confidence 578999999 599999999999999999976433499999999999988876654422 112345678899999 99999
Q ss_pred EcCCCcChHhhHHHHHHHHhcCCeEEEecCCCChhHHHHHHHHHHHcCCCCCeEEEEcCCchhHHHHHHhCCCcCeEEEe
Q 015031 78 IIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFT 157 (414)
Q Consensus 78 i~p~n~P~~~~~~~~~~ALaaGN~vv~kps~~~~~~~~~l~~~~~~aglp~g~v~~~~~~~~~~~~~l~~~~~~~~v~~t 157 (414)
|+|||||+....+++++|| +||+||+|||+.+|+++..+.+++.++|+|+|++|+++|++.+.++.|+.||+++.|.||
T Consensus 177 I~PwN~P~~~~~~~~a~AL-aGN~VVlKPs~~tp~~~~~l~~~~~~aGlP~gvv~vv~g~~~~~g~~Lv~~p~v~~V~FT 255 (533)
T TIGR01236 177 ISPFNFTAIAGNLPGAPAL-MGNTVIWKPSITATLSNYLTMRILEEAGLPPGVINFVPGDGFAVSDVVLADPRLAGIHFT 255 (533)
T ss_pred EeCCchHHHHHHHHHHHHH-hCCeEEEECCCcCCHHHHHHHHHHHhcCCCCCcEEEEecCcHHHHHHHhcCCCcCEEEEE
Confidence 9999999999999999999 899999999999999999999999999999999999999777889999999999999999
Q ss_pred CCHHHHHHHHHHHhhCCCC------ceeeeCCCCCceeecCCCCHHHHHHHHHHHHhcccCCccccCcEEEEeCccHHHH
Q 015031 158 GSTDVGRQVMQAAATSNLK------PVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEF 231 (414)
Q Consensus 158 Gs~~~~~~i~~~~~~~~~~------~~~~e~gG~~~~iV~~dadl~~a~~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f 231 (414)
||+++|+.|.+.++ ++++ ++++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|
T Consensus 256 GS~~~G~~i~~~aa-~~l~~~~~~~~v~lElGGknp~IV~~dADl~~Aa~~i~~~~f~~~GQ~C~a~~rv~V~~~i~d~f 334 (533)
T TIGR01236 256 GSTATFKHLWKWVA-SNLDRYHNFPRIVGETGGKDFHVVHPSADIDHAVTATIRGAFEYQGQKCSAASRLYVPHSVWPRF 334 (533)
T ss_pred CCHHHHHHHHHHHH-hhccccccCCcEEEEcCCCCeEEECCCCCHHHHHHHHHHHHHhhCCCCCcCCeeEEEchhHHHHH
Confidence 99999999999988 6665 4999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhccccCCCCCCCCCccccCCHHHHHHHHHHHHHhhhcC--CeEeeCCcccCCCCceeeeEEEEeCCCCCccc
Q 015031 232 EKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREG--ATLLTGGKPIGKKGYYIEPTIFTNVTEDMLIA 309 (414)
Q Consensus 232 ~~~l~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~g--a~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~ 309 (414)
+++|+++++++++|+|.|+++++||+++..+++++.+++++++++| +++++||......|+|++|||+.+++++|+++
T Consensus 335 ~~~l~~~~~~l~~G~p~d~~t~~Gpli~~~~~~~v~~~i~~a~~~Ga~a~vl~GG~~~~~~G~~~~PTvl~~~~~d~~i~ 414 (533)
T TIGR01236 335 KDELLAELAEVKVGDPDDFSNFMGAVIDERSFVKNVKYIERAKGDPAELTILYGGKYDDSEGYFVEPTVILSKDPTDPLM 414 (533)
T ss_pred HHHHHHHHhcCCcCCCCCCCCcccccCCHHHHHHHHHHHHHHHhcCCceEEEeCCCcCCCCCeEEeeEEEecCCCCChhh
Confidence 9999999999999999999999999999999999999999999987 79999997654468999999999999999999
Q ss_pred ccccccceEEEeeeCC--HHHHHHHH-hcCCCCceEEEecCCHHHHHHHHhccc--eeEEEECCcCC--CCCCCCccCCC
Q 015031 310 KNEIFGPVMALMKFKT--VEEAIKSA-NNTRYGLAAGIMTKDLNVANTVSRSIR--AGIIWINCYFA--FDSDCPYGGYK 382 (414)
Q Consensus 310 ~~E~fgPvl~v~~~~~--~~eai~~~-n~~~~gl~~sv~s~d~~~~~~~~~~l~--~g~v~vN~~~~--~~~~~pfgG~~ 382 (414)
+||+||||++|++|+| ++||++++ |+++|||+++|||+|.+.+.+++++++ +|.|+||+... ..+.+||||+|
T Consensus 415 ~eE~FGPVl~v~~~~~~~~~eai~~~~n~~~~gL~a~Vft~d~~~a~~~~~~l~~~~G~v~IN~~~~~~~~~~~PfGG~k 494 (533)
T TIGR01236 415 VEEIFGPVLTVYVYPDDKYKEILDVVDSTSRYGLTGAVFAKDRQAILEADKRLRFAAGNFYINDKPTGAVVGQQPFGGAR 494 (533)
T ss_pred cccCCCCeEEEEEeCCCCHHHHHHHHhcCCCcCceEEEEeCCHHHHHHHHHHhhhcCcEEEECCCCCCCCCCCCCCCCcc
Confidence 9999999999999998 59999999 889999999999999999999999977 99999998754 33678999999
Q ss_pred CCCCC-CcchHHHHHhhhcccEEEEeC
Q 015031 383 MSGFG-RDCGLESLHNYLQVKSVVTPI 408 (414)
Q Consensus 383 ~sG~g-~~~g~~~~~~~~~~k~i~~~~ 408 (414)
.||+| +.+|.+++++|+++|+++...
T Consensus 495 ~SG~G~~~~g~~~l~~f~~~k~v~~~~ 521 (533)
T TIGR01236 495 GSGTNDKAGGPLNLLRWTSARSIKETF 521 (533)
T ss_pred cccCCcccCCHHHHHHhcceEEEEEEc
Confidence 99998 899999999999999998765
|
This model represents one of two related branches of delta-1-pyrroline-5-carboxylate dehydrogenase. The two branches are not as closely related to each other as some aldehyde dehydrogenases are to this branch, and separate models are built for this reason. The enzyme is the second of two in the degradation of proline to glutamate. |
| >cd07150 ALDH_VaniDH_like Pseudomonas putida vanillin dehydrogenase-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-85 Score=666.34 Aligned_cols=400 Identities=40% Similarity=0.657 Sum_probs=378.5
Q ss_pred CHHHHHHHHHhHHHHHHHHHHHcCCChHHHhhccHHHHHHHHHHHHHhhhhhcCceeccc-cCccccccccCCcEEEEEc
Q 015031 1 MLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMS-RALQGYTLREPIGVVGHII 79 (414)
Q Consensus 1 L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~-~~~~~~~~~~P~Gvv~~i~ 79 (414)
|+++++.|++++++|+++++.|+|||..++ ..|+..+++.+++++.++++..+...+.. .+...+.+++|+|||++|+
T Consensus 49 L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a-~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~ 127 (451)
T cd07150 49 LLKAAEIMERRADDLIDLLIDEGGSTYGKA-WFETTFTPELLRAAAGECRRVRGETLPSDSPGTVSMSVRRPLGVVAGIT 127 (451)
T ss_pred HHHHHHHHHHhHHHHHHHHHHhcCCCHHHH-HHHHHHHHHHHHHHHHHHHHhcCccccCCCCCceeEEEEecccEEEEEC
Confidence 578999999999999999999999999875 56999999999999988877655444333 4556789999999999999
Q ss_pred CCCcChHhhHHHHHHHHhcCCeEEEecCCCChhHHHHHHHHHHHcCCCCCeEEEEcCCchhHHHHHHhCCCcCeEEEeCC
Q 015031 80 PWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGS 159 (414)
Q Consensus 80 p~n~P~~~~~~~~~~ALaaGN~vv~kps~~~~~~~~~l~~~~~~aglp~g~v~~~~~~~~~~~~~l~~~~~~~~v~~tGs 159 (414)
|||||+...++++++||++||+||+|||+.+|.++..+.+++.++|+|+|+++++++++.+.+..|+.|+++|.|.||||
T Consensus 128 P~N~P~~~~~~~~~~ALaaGN~VilKps~~~p~t~~~l~~~~~~ag~P~g~v~~v~g~~~~~~~~l~~~~~v~~V~ftGs 207 (451)
T cd07150 128 PFNYPLILATKKVAFALAAGNTVVLKPSEETPVIGLKIAEIMEEAGLPKGVFNVVTGGGAEVGDELVDDPRVRMVTFTGS 207 (451)
T ss_pred CCccHHHHHHHHHHHHHhcCCeEEEECCccCcHHHHHHHHHHHHhCCCcCcEEEeeCCCcHHHHHHhcCCCCCEEEEECc
Confidence 99999999999999999999999999999999999999999999999999999999977788999999999999999999
Q ss_pred HHHHHHHHHHHhhCCCCceeeeCCCCCceeecCCCCHHHHHHHHHHHHhcccCCccccCcEEEEeCccHHHHHHHHHHHH
Q 015031 160 TDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKA 239 (414)
Q Consensus 160 ~~~~~~i~~~~~~~~~~~~~~e~gG~~~~iV~~dadl~~a~~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f~~~l~~~~ 239 (414)
+.+|+.|.+.++ ++.+|+++|+|||||+||++|||++.|++.+++++|.|+||.|+++++||||++++|+|+++|++++
T Consensus 208 ~~~g~~i~~~aa-~~~~~~~lelGG~~~~iV~~dadl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~~~f~~~l~~~~ 286 (451)
T cd07150 208 TAVGREIAEKAG-RHLKKITLELGGKNPLIVLADADLDYAVRAAAFGAFMHQGQICMSASRIIVEEPVYDEFVKKFVARA 286 (451)
T ss_pred HHHHHHHHHHHh-hcCCceEeecCCCCeeEECCCCChHHHHHHHHHHHHhhcCCCCCCCeeEEEcHHHHHHHHHHHHHHH
Confidence 999999999988 7899999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hccccCCCCCCCCCccccCCHHHHHHHHHHHHHhhhcCCeEeeCCcccCCCCceeeeEEEEeCCCCCcccccccccceEE
Q 015031 240 KAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIGKKGYYIEPTIFTNVTEDMLIAKNEIFGPVMA 319 (414)
Q Consensus 240 ~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~ 319 (414)
+++++|+|.++++++||++++.+++++++++++++++|+++++||.. +|+|++|||+.+++++|++++||+||||++
T Consensus 287 ~~~~~g~p~~~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~vl~gg~~---~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~ 363 (451)
T cd07150 287 SKLKVGDPRDPDTVIGPLISPRQVERIKRQVEDAVAKGAKLLTGGKY---DGNFYQPTVLTDVTPDMRIFREETFGPVTS 363 (451)
T ss_pred HhcCCCCCCCCCCCCCCCcCHHHHHHHHHHHHHHHhCCCEEEeCCcc---CCcEEcCEEEeCCCCCCHHHhCCCcCceEE
Confidence 99999999999999999999999999999999999999999999864 589999999999999999999999999999
Q ss_pred EeeeCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHHhccceeEEEECCcCCCC-CCCCccCCCCCCCCCcchHHHHHhh
Q 015031 320 LMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSIRAGIIWINCYFAFD-SDCPYGGYKMSGFGRDCGLESLHNY 398 (414)
Q Consensus 320 v~~~~~~~eai~~~n~~~~gl~~sv~s~d~~~~~~~~~~l~~g~v~vN~~~~~~-~~~pfgG~~~sG~g~~~g~~~~~~~ 398 (414)
|++|+|+||||+++|+++|||++||||+|.+.++++++++++|+|+||++.... +.+||||+|.||+|+++|.+|+++|
T Consensus 364 v~~~~~~~eai~~~n~~~~gL~a~v~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~~pfgG~~~SG~G~~~g~~~l~~~ 443 (451)
T cd07150 364 VIPAKDAEEALELANDTEYGLSAAILTNDLQRAFKLAERLESGMVHINDPTILDEAHVPFGGVKASGFGREGGEWSMEEF 443 (451)
T ss_pred EEEeCCHHHHHHHHhCCCCCCeEEEEeCCHHHHHHHHHhcCcCEEEECCCCCCCCCCCCcCCccccccCcCCcHHHHHHh
Confidence 999999999999999999999999999999999999999999999999987643 6789999999999999999999999
Q ss_pred hcccEEE
Q 015031 399 LQVKSVV 405 (414)
Q Consensus 399 ~~~k~i~ 405 (414)
|++|+++
T Consensus 444 ~~~k~v~ 450 (451)
T cd07150 444 TELKWIT 450 (451)
T ss_pred heeeEEe
Confidence 9999885
|
Vanillin dehydrogenase (Vdh, VaniDH) involved in the metabolism of ferulic acid and other related sequences are included in this CD. The E. coli vanillin dehydrogenase (LigV) preferred NAD+ to NADP+ and exhibited a broad substrate preference, including vanillin, benzaldehyde, protocatechualdehyde, m-anisaldehyde, and p-hydroxybenzaldehyde. |
| >cd07114 ALDH_DhaS Uncharacterized Candidatus pelagibacter aldehyde dehydrogenase, DhaS-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-85 Score=666.40 Aligned_cols=403 Identities=48% Similarity=0.823 Sum_probs=379.9
Q ss_pred CHHHHHHHHHhHHHHHHHHHHHcCCChHHHhhccHHHHHHHHHHHHHhhhhhcCceeccc-cCccccccccCCcEEEEEc
Q 015031 1 MLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMS-RALQGYTLREPIGVVGHII 79 (414)
Q Consensus 1 L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~-~~~~~~~~~~P~Gvv~~i~ 79 (414)
|++++++|.+++++|++++++|+|||..++ ..|+..+++.+++++.+.++..+...+.. .+...+.+++|+|||++|+
T Consensus 49 L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~~-~~ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~I~ 127 (457)
T cd07114 49 LRRLADLIEANAEELAELETRDNGKLIRET-RAQVRYLAEWYRYYAGLADKIEGAVIPVDKGDYLNFTRREPLGVVAAIT 127 (457)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcCCCHHHH-HHHHHHHHHHHHHHHHHHHHhcCcccccCCCCceEEEEEecceEEEEEC
Confidence 578999999999999999999999999975 57999999999999987766544433322 3455678999999999999
Q ss_pred CCCcChHhhHHHHHHHHhcCCeEEEecCCCChhHHHHHHHHHHHcCCCCCeEEEEcCCchhHHHHHHhCCCcCeEEEeCC
Q 015031 80 PWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGS 159 (414)
Q Consensus 80 p~n~P~~~~~~~~~~ALaaGN~vv~kps~~~~~~~~~l~~~~~~aglp~g~v~~~~~~~~~~~~~l~~~~~~~~v~~tGs 159 (414)
|||||+...++++++||++||+||+|||+.+|.++..+.++|.++|+|+|++|++++++.+.+..|+.|++++.|.||||
T Consensus 128 p~N~P~~~~~~~~~~AL~aGN~Vilkps~~~p~~~~~l~~~l~~aglP~~vv~~v~g~~~~~~~~l~~~~~i~~V~ftGs 207 (457)
T cd07114 128 PWNSPLLLLAKKLAPALAAGNTVVLKPSEHTPASTLELAKLAEEAGFPPGVVNVVTGFGPETGEALVEHPLVAKIAFTGG 207 (457)
T ss_pred CCccHHHHHHHHHHHHHhcCCeEEeECCccchHHHHHHHHHHHHcCcCCCcEEEEeCCCchHHHHHhcCCCCCEEEEECC
Confidence 99999999999999999999999999999999999999999999999999999999977778899999999999999999
Q ss_pred HHHHHHHHHHHhhCCCCceeeeCCCCCceeecCCCCHHHHHHHHHHHHhcccCCccccCcEEEEeCccHHHHHHHHHHHH
Q 015031 160 TDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKA 239 (414)
Q Consensus 160 ~~~~~~i~~~~~~~~~~~~~~e~gG~~~~iV~~dadl~~a~~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f~~~l~~~~ 239 (414)
+.+++.+.+.++ ++++|+++|+||+||+||++|||++.|++.|++++|.|+||.|+++++||||++++|+|+++|++++
T Consensus 208 ~~~g~~v~~~aa-~~~~~~~lelgG~~~~iV~~dAdl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~v~~~f~~~l~~~~ 286 (457)
T cd07114 208 TETGRHIARAAA-ENLAPVTLELGGKSPNIVFDDADLDAAVNGVVAGIFAAAGQTCVAGSRLLVQRSIYDEFVERLVARA 286 (457)
T ss_pred HHHHHHHHHHHH-hcCCeEEEecCCCCeeEECCCCCHHHHHHHHHHHHHhccCCCCCCCceEEEcHHHHHHHHHHHHHHH
Confidence 999999999987 7889999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hccccCCCCCCCCCccccCCHHHHHHHHHHHHHhhhcCCeEeeCCcccC----CCCceeeeEEEEeCCCCCccccccccc
Q 015031 240 KAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIG----KKGYYIEPTIFTNVTEDMLIAKNEIFG 315 (414)
Q Consensus 240 ~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~----~~g~~~~Ptvl~~~~~~~~~~~~E~fg 315 (414)
+++++|+|.++++++||++++.+++++++++++++++|+++++||.... ..|+|++|||+.+++++++++++|+||
T Consensus 287 ~~~~~g~p~~~~~~~gpli~~~~~~~~~~~i~~a~~~ga~~l~gg~~~~~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fg 366 (457)
T cd07114 287 RAIRVGDPLDPETQMGPLATERQLEKVERYVARAREEGARVLTGGERPSGADLGAGYFFEPTILADVTNDMRIAQEEVFG 366 (457)
T ss_pred HhCCCCCCCCCCCCCCCCcCHHHHHHHHHHHHHHHHCCCEEEeCCCccccccCCCCCEECCEEEeCCCCCChhhhcCCcC
Confidence 9999999999999999999999999999999999999999999997643 358999999999999999999999999
Q ss_pred ceEEEeeeCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHHhccceeEEEECCcCCCCCCCCccCCCCCCCCCcchHHHH
Q 015031 316 PVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSIRAGIIWINCYFAFDSDCPYGGYKMSGFGRDCGLESL 395 (414)
Q Consensus 316 Pvl~v~~~~~~~eai~~~n~~~~gl~~sv~s~d~~~~~~~~~~l~~g~v~vN~~~~~~~~~pfgG~~~sG~g~~~g~~~~ 395 (414)
||++|++|+|.||||+++|+++|||++||||+|.+.++++++++++|+|+||+.....+.+||||+|.||+|+++|.+++
T Consensus 367 Pvl~v~~~~~~deai~~~n~~~~gL~~~ift~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~pfgG~k~SG~G~~~g~~~~ 446 (457)
T cd07114 367 PVLSVIPFDDEEEAIALANDSEYGLAAGIWTRDLARAHRVARAIEAGTVWVNTYRALSPSSPFGGFKDSGIGRENGIEAI 446 (457)
T ss_pred ceEEEeccCCHHHHHHHhhCCCcCceeEEECCCHHHHHHHHHhcCcceEEECCCCCCCCCCCCCCCccCcCCccchHHHH
Confidence 99999999999999999999999999999999999999999999999999999877778899999999999999999999
Q ss_pred HhhhcccEEE
Q 015031 396 HNYLQVKSVV 405 (414)
Q Consensus 396 ~~~~~~k~i~ 405 (414)
++||++|+++
T Consensus 447 ~~f~~~k~~~ 456 (457)
T cd07114 447 REYTQTKSVW 456 (457)
T ss_pred HHHhceeEEe
Confidence 9999999985
|
Uncharacterized aldehyde dehydrogenase from Candidatus pelagibacter (DhaS) and other related sequences are present in this CD. |
| >cd07131 ALDH_AldH-CAJ73105 Uncharacterized Candidatus kuenenia aldehyde dehydrogenase AldH (CAJ73105)-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.6e-85 Score=667.93 Aligned_cols=405 Identities=43% Similarity=0.707 Sum_probs=379.5
Q ss_pred CHHHHHHHHHhHHHHHHHHHHHcCCChHHHhhccHHHHHHHHHHHHHhhhhhcCceeccc-cCccccccccCCcEEEEEc
Q 015031 1 MLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMS-RALQGYTLREPIGVVGHII 79 (414)
Q Consensus 1 L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~-~~~~~~~~~~P~Gvv~~i~ 79 (414)
|+++++.|++++++|++++++|+|||..++ ..|+..+++.+++++...++..+...+.. .+...+.+++|+|||++|+
T Consensus 65 l~~~a~~l~~~~~ela~~~~~e~Gk~~~~~-~~ev~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~ 143 (478)
T cd07131 65 LFRAAELLKKRKEELARLVTREMGKPLAEG-RGDVQEAIDMAQYAAGEGRRLFGETVPSELPNKDAMTRRQPIGVVALIT 143 (478)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHcCCCHHHH-HHHHHHHHHHHHHHHHHHHHhCCcccccCCCCceEEEEeeceeEEEEEC
Confidence 578999999999999999999999999975 46999999999999888776554433221 2335678999999999999
Q ss_pred CCCcChHhhHHHHHHHHhcCCeEEEecCCCChhHHHHHHHHHHHcCCCCCeEEEEcCCchhHHHHHHhCCCcCeEEEeCC
Q 015031 80 PWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGS 159 (414)
Q Consensus 80 p~n~P~~~~~~~~~~ALaaGN~vv~kps~~~~~~~~~l~~~~~~aglp~g~v~~~~~~~~~~~~~l~~~~~~~~v~~tGs 159 (414)
|||||+...++++++||++||+||+|||+.+|.++..+.++|.++|+|+|++|++++++.+.+..|+.||++|.|.||||
T Consensus 144 p~N~P~~~~~~~~~~ALaaGN~VvlKps~~~p~~~~~l~~~l~~aGlP~gvv~~v~g~~~~~~~~L~~~~~vd~V~ftGs 223 (478)
T cd07131 144 PWNFPVAIPSWKIFPALVCGNTVVFKPAEDTPACALKLVELFAEAGLPPGVVNVVHGRGEEVGEALVEHPDVDVVSFTGS 223 (478)
T ss_pred CcCcHHHHHHHHHHHHHHcCCEEEEECCCcCcHHHHHHHHHHHhcCcCCCcEEEEecCchHHHHHHhcCCCCCEEEEECc
Confidence 99999999999999999999999999999999999999999999999999999999977778999999999999999999
Q ss_pred HHHHHHHHHHHhhCCCCceeeeCCCCCceeecCCCCHHHHHHHHHHHHhcccCCccccCcEEEEeCccHHHHHHHHHHHH
Q 015031 160 TDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKA 239 (414)
Q Consensus 160 ~~~~~~i~~~~~~~~~~~~~~e~gG~~~~iV~~dadl~~a~~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f~~~l~~~~ 239 (414)
+.+|+.|.+.++ ++++|+++|+||+||+||++|||++.|++.+++++|+|+||.|+++++||||++++|+|+++|++++
T Consensus 224 ~~~g~~i~~~aa-~~~~~~~lelgG~~p~iV~~dADl~~Aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~~~f~~~l~~~~ 302 (478)
T cd07131 224 TEVGERIGETCA-RPNKRVALEMGGKNPIIVMDDADLDLALEGALWSAFGTTGQRCTATSRLIVHESVYDEFLKRFVERA 302 (478)
T ss_pred HHHHHHHHHHHh-hcCCcEEEECCCCCeEEECCCCCHHHHHHHHHHHHHhcCCCCCCCCeEEEEehhhHHHHHHHHHHHH
Confidence 999999999887 7899999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hccccCCCCCCCCCccccCCHHHHHHHHHHHHHhhhcCCeEeeCCcccC----CCCceeeeEEEEeCCCCCccccccccc
Q 015031 240 KAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIG----KKGYYIEPTIFTNVTEDMLIAKNEIFG 315 (414)
Q Consensus 240 ~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~----~~g~~~~Ptvl~~~~~~~~~~~~E~fg 315 (414)
+++++|+|.++++++||++++.+++++++++++++.+|+++++||.... .+|+|++|||+.+++++|+++++|+||
T Consensus 303 ~~~~~g~p~~~~~~~gpli~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~Fg 382 (478)
T cd07131 303 KRLRVGDGLDEETDMGPLINEAQLEKVLNYNEIGKEEGATLLLGGERLTGGGYEKGYFVEPTVFTDVTPDMRIAQEEIFG 382 (478)
T ss_pred HhcCCCCCCCCCCcCCcCCCHHHHHHHHHHHHHHHHCCCEEEeCCCccccccCCCCceECCEEEeCCCCCChHhhCCCcC
Confidence 9999999999999999999999999999999999999999999997642 368999999999999999999999999
Q ss_pred ceEEEeeeCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHHhccceeEEEECCcCC-CCCCCCccCCCCCCCC-CcchHH
Q 015031 316 PVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSIRAGIIWINCYFA-FDSDCPYGGYKMSGFG-RDCGLE 393 (414)
Q Consensus 316 Pvl~v~~~~~~~eai~~~n~~~~gl~~sv~s~d~~~~~~~~~~l~~g~v~vN~~~~-~~~~~pfgG~~~sG~g-~~~g~~ 393 (414)
||++|++|+|+||||+++|++++||+++|||+|.+.++++++++++|+|+||+... ..+.+||||+|.||+| +++|.+
T Consensus 383 Pvl~v~~~~~~~eai~~~n~~~~gL~~~v~t~d~~~a~~~~~~l~~G~v~iN~~~~~~~~~~pfgG~k~SG~G~~~~g~~ 462 (478)
T cd07131 383 PVVALIEVSSLEEAIEIANDTEYGLSSAIYTEDVNKAFRARRDLEAGITYVNAPTIGAEVHLPFGGVKKSGNGHREAGTT 462 (478)
T ss_pred CeEEEEEeCCHHHHHHHHhCCCCcceEEEEcCCHHHHHHHHHhcCccEEEECCCCCCCCCCCCCCCcccccCCCcCCcHH
Confidence 99999999999999999999999999999999999999999999999999999765 3568999999999999 788999
Q ss_pred HHHhhhcccEEEEe
Q 015031 394 SLHNYLQVKSVVTP 407 (414)
Q Consensus 394 ~~~~~~~~k~i~~~ 407 (414)
|+++||+.|+|+++
T Consensus 463 ~~~~f~~~k~i~~~ 476 (478)
T cd07131 463 ALDAFTEWKAVYVD 476 (478)
T ss_pred HHHHhhheEEEEEe
Confidence 99999999999875
|
Uncharacterized aldehyde dehydrogenase of Candidatus kuenenia AldH (locus CAJ73105) and similar sequences with similarity to alpha-aminoadipic semialdehyde dehydrogenase (AASADH, human ALDH7A1, EC=1.2.1.31), Arabidopsis ALDH7B4, and Streptomyces clavuligerus delta-1-piperideine-6-carboxylate dehydrogenase (P6CDH) are included in this CD. |
| >cd07139 ALDH_AldA-Rv0768 Mycobacterium tuberculosis aldehyde dehydrogenase AldA-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-85 Score=667.71 Aligned_cols=402 Identities=41% Similarity=0.710 Sum_probs=376.8
Q ss_pred CHHHHHHHHHhHHHHHHHHHHHcCCChHHHhhccHHHHHHHHHHHHHhhhhhcCce-eccccCccccccccCCcEEEEEc
Q 015031 1 MLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEV-LKMSRALQGYTLREPIGVVGHII 79 (414)
Q Consensus 1 L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~~~~~~~~~-~~~~~~~~~~~~~~P~Gvv~~i~ 79 (414)
|+++++.|++|+++|++++++|+|||..++...|+..+++.++++++.+++..+.. .+...+...+.+++|+|||++|+
T Consensus 66 L~~~a~~l~~~~~ela~~~~~e~Gk~~~~~~~~ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~I~ 145 (471)
T cd07139 66 LRRLADALEARADELARLWTAENGMPISWSRRAQGPGPAALLRYYAALARDFPFEERRPGSGGGHVLVRREPVGVVAAIV 145 (471)
T ss_pred HHHHHHHHHHhHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCccccCCCCceEEEEEEeccEEEEEc
Confidence 57899999999999999999999999976656699999999999998876654322 22222445678999999999999
Q ss_pred CCCcChHhhHHHHHHHHhcCCeEEEecCCCChhHHHHHHHHHHHcCCCCCeEEEEcCCchhHHHHHHhCCCcCeEEEeCC
Q 015031 80 PWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGS 159 (414)
Q Consensus 80 p~n~P~~~~~~~~~~ALaaGN~vv~kps~~~~~~~~~l~~~~~~aglp~g~v~~~~~~~~~~~~~l~~~~~~~~v~~tGs 159 (414)
|||||+...++++++||++||+||+|||+.+|.++..+.+++.++|+|+|++|++++ +.+.+..|+.|++++.|.||||
T Consensus 146 p~N~P~~~~~~~i~~ALaaGN~VvlKps~~~p~~~~~l~~~~~~aglP~gv~~~v~g-~~~~~~~l~~~~~i~~v~ftGs 224 (471)
T cd07139 146 PWNAPLFLAALKIAPALAAGCTVVLKPSPETPLDAYLLAEAAEEAGLPPGVVNVVPA-DREVGEYLVRHPGVDKVSFTGS 224 (471)
T ss_pred CCchHHHHHHHHHHHHHhcCCEEEEECCCcCCHHHHHHHHHHHHcCCCCCcEEEEeC-CHHHHHHHhcCCCCCEEEEECc
Confidence 999999999999999999999999999999999999999999999999999999998 5578899999999999999999
Q ss_pred HHHHHHHHHHHhhCCCCceeeeCCCCCceeecCCCCHHHHHHHHHHHHhcccCCccccCcEEEEeCccHHHHHHHHHHHH
Q 015031 160 TDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKA 239 (414)
Q Consensus 160 ~~~~~~i~~~~~~~~~~~~~~e~gG~~~~iV~~dadl~~a~~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f~~~l~~~~ 239 (414)
+.+|+.|.+.++ ++++|+++|+||+||+||++|||++.|++.+++++|.|+||.|+++++||||++++|+|+++|++++
T Consensus 225 ~~~g~~v~~~~~-~~~~~~~lElGG~np~iV~~dADl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~ 303 (471)
T cd07139 225 TAAGRRIAAVCG-ERLARVTLELGGKSAAIVLDDADLDAAVPGLVPASLMNNGQVCVALTRILVPRSRYDEVVEALAAAV 303 (471)
T ss_pred HHHHHHHHHHHH-hcCCEEEEEcCCCCeeEECCCCCHHHHHHHHHHHHHhcCCCCCcCCcEEEEeHhHHHHHHHHHHHHH
Confidence 999999999887 7889999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hccccCCCCCCCCCccccCCHHHHHHHHHHHHHhhhcCCeEeeCCcccC--CCCceeeeEEEEeCCCCCcccccccccce
Q 015031 240 KAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIG--KKGYYIEPTIFTNVTEDMLIAKNEIFGPV 317 (414)
Q Consensus 240 ~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~--~~g~~~~Ptvl~~~~~~~~~~~~E~fgPv 317 (414)
+++++|+|.++++++||++++.+++++++++++++.+|+++++||.... ..|+|+.|||+.+++++|++++||+||||
T Consensus 304 ~~~~~g~p~~~~~~~gpli~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~~~~~~~~~~Ptvl~~v~~~~~~~~eE~FgPv 383 (471)
T cd07139 304 AALKVGDPLDPATQIGPLASARQRERVEGYIAKGRAEGARLVTGGGRPAGLDRGWFVEPTLFADVDNDMRIAQEEIFGPV 383 (471)
T ss_pred HhCCcCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCEEEeCCCcCCCCCCCeEEccEEEecCCCcchHHhCccCCCe
Confidence 9999999999999999999999999999999999999999999997643 35899999999999999999999999999
Q ss_pred EEEeeeCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHHhccceeEEEECCcCCCCCCCCccCCCCCCCCCcchHHHHHh
Q 015031 318 MALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSIRAGIIWINCYFAFDSDCPYGGYKMSGFGRDCGLESLHN 397 (414)
Q Consensus 318 l~v~~~~~~~eai~~~n~~~~gl~~sv~s~d~~~~~~~~~~l~~g~v~vN~~~~~~~~~pfgG~~~sG~g~~~g~~~~~~ 397 (414)
++|++|+|.||||+++|++++||+++|||+|.+.+.++++++++|+|+||++. ..+.+||||+|.||+|+++|.+|+++
T Consensus 384 l~v~~~~~~~eai~~~n~~~~gL~a~i~s~d~~~~~~~~~~l~~G~v~iN~~~-~~~~~PfgG~k~SG~G~~~g~~~~~~ 462 (471)
T cd07139 384 LSVIPYDDEDDAVRIANDSDYGLSGSVWTADVERGLAVARRIRTGTVGVNGFR-LDFGAPFGGFKQSGIGREGGPEGLDA 462 (471)
T ss_pred EEEeecCCHHHHHHHHhCCCCCceEEEEcCCHHHHHHHHHhCCcceEEECCCC-CCCCCCCCCcccccCCccchHHHHHH
Confidence 99999999999999999999999999999999999999999999999999976 56789999999999999999999999
Q ss_pred hhcccEEE
Q 015031 398 YLQVKSVV 405 (414)
Q Consensus 398 ~~~~k~i~ 405 (414)
||++|+++
T Consensus 463 ft~~k~i~ 470 (471)
T cd07139 463 YLETKSIY 470 (471)
T ss_pred HhceeEEe
Confidence 99999985
|
The Mycobacterium tuberculosis NAD+-dependent, aldehyde dehydrogenase PDB structure, 3B4W, and the Mycobacterium tuberculosis H37Rv aldehyde dehydrogenase AldA (locus Rv0768) sequence, as well as the Rhodococcus rhodochrous ALDH involved in haloalkane catabolism, and other similar sequences, are included in this CD. |
| >cd07102 ALDH_EDX86601 Uncharacterized aldehyde dehydrogenase of Synechococcus sp | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.3e-85 Score=663.44 Aligned_cols=402 Identities=34% Similarity=0.537 Sum_probs=378.5
Q ss_pred CHHHHHHHHHhHHHHHHHHHHHcCCChHHHhhccHHHHHHHHHHHHHhhhhhcCce-eccccCccccccccCCcEEEEEc
Q 015031 1 MLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEV-LKMSRALQGYTLREPIGVVGHII 79 (414)
Q Consensus 1 L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~~~~~~~~~-~~~~~~~~~~~~~~P~Gvv~~i~ 79 (414)
|+++++.|++++++|++++++|+|||..++ ..|+..+++.+++++..+++..+.. .+...+...+.+++|+|||++|+
T Consensus 46 L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~~-~~ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~ 124 (452)
T cd07102 46 VTRAVELLAANTDEIAEELTWQMGRPIAQA-GGEIRGMLERARYMISIAEEALADIRVPEKDGFERYIRREPLGVVLIIA 124 (452)
T ss_pred HHHHHHHHHHCHHHHHHHHHHHhCCCHHHH-HHHHHHHHHHHHHHHHHHHHhcCCcccCCCCCeeEEEEEEeccEEEEEc
Confidence 578999999999999999999999999975 5799999999999998877654432 22234556778999999999999
Q ss_pred CCCcChHhhHHHHHHHHhcCCeEEEecCCCChhHHHHHHHHHHHcCCCCCeEEEEcCCchhHHHHHHhCCCcCeEEEeCC
Q 015031 80 PWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGS 159 (414)
Q Consensus 80 p~n~P~~~~~~~~~~ALaaGN~vv~kps~~~~~~~~~l~~~~~~aglp~g~v~~~~~~~~~~~~~l~~~~~~~~v~~tGs 159 (414)
|||||+...++++++||++||+||+|||+.+|.++..|.+++.++|+|+|++|++++++ +.+..|+.||.+|.|.||||
T Consensus 125 p~N~P~~~~~~~l~~ALaaGN~VVlKps~~~~~~~~~l~~~l~~aGlP~g~~~~v~g~~-~~~~~L~~~~~v~~V~fTGs 203 (452)
T cd07102 125 PWNYPYLTAVNAVIPALLAGNAVILKHSPQTPLCGERFAAAFAEAGLPEGVFQVLHLSH-ETSAALIADPRIDHVSFTGS 203 (452)
T ss_pred CCchHHHHHHHHHHHHHHcCCEEEEECCCCCcHHHHHHHHHHHhcCCCcCcEEEEeCCc-hhHHHHhcCCCCCEEEEECc
Confidence 99999999999999999999999999999999999999999999999999999999966 78999999999999999999
Q ss_pred HHHHHHHHHHHhhCCCCceeeeCCCCCceeecCCCCHHHHHHHHHHHHhcccCCccccCcEEEEeCccHHHHHHHHHHHH
Q 015031 160 TDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKA 239 (414)
Q Consensus 160 ~~~~~~i~~~~~~~~~~~~~~e~gG~~~~iV~~dadl~~a~~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f~~~l~~~~ 239 (414)
+++|+.|.+.++ +..+|+.+|+|||||+||++|||++.|++.+++++|+|+||.|++++++|||++++|+|+++|++++
T Consensus 204 ~~~g~~v~~~a~-~~~~~v~lelgG~~~~iV~~dADl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~v~~~f~~~L~~~~ 282 (452)
T cd07102 204 VAGGRAIQRAAA-GRFIKVGLELGGKDPAYVRPDADLDAAAESLVDGAFFNSGQSCCSIERIYVHESIYDAFVEAFVAVV 282 (452)
T ss_pred HHHHHHHHHHHH-hcCCcEEEECCCCCceEEcCCCCHHHHHHHHHHHHHHhCCCCCcCCcEEEEeHHHHHHHHHHHHHHH
Confidence 999999999887 7889999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hccccCCCCCCCCCccccCCHHHHHHHHHHHHHhhhcCCeEeeCCccc---CCCCceeeeEEEEeCCCCCcccccccccc
Q 015031 240 KAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPI---GKKGYYIEPTIFTNVTEDMLIAKNEIFGP 316 (414)
Q Consensus 240 ~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ga~v~~gg~~~---~~~g~~~~Ptvl~~~~~~~~~~~~E~fgP 316 (414)
+++++|+|.++++++||+++..+++++++++++++.+|+++++||... ...|+|++|||+.+++++|+++++|+|||
T Consensus 283 ~~l~vg~p~~~~~~~gpli~~~~~~~i~~~i~~a~~~ga~vl~gg~~~~~~~~~g~~~~Ptvl~~~~~~~~i~~~E~fgP 362 (452)
T cd07102 283 KGYKLGDPLDPSTTLGPVVSARAADFVRAQIADAIAKGARALIDGALFPEDKAGGAYLAPTVLTNVDHSMRVMREETFGP 362 (452)
T ss_pred HhccCCCCCCCCCCCCCCcCHHHHHHHHHHHHHHHhCCCEEEeCCCCCCCCCCCCceEcCEEEecCCCCChhhhcCCcCC
Confidence 999999999999999999999999999999999999999999999753 23689999999999999999999999999
Q ss_pred eEEEeeeCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHHhccceeEEEECCcCCCCCCCCccCCCCCCCCCcchHHHHH
Q 015031 317 VMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSIRAGIIWINCYFAFDSDCPYGGYKMSGFGRDCGLESLH 396 (414)
Q Consensus 317 vl~v~~~~~~~eai~~~n~~~~gl~~sv~s~d~~~~~~~~~~l~~g~v~vN~~~~~~~~~pfgG~~~sG~g~~~g~~~~~ 396 (414)
|++|++|+|.||||+++|+++|||+++|||+|.+.+.++++++++|+|+||++....+.+||||+|.||+|+++|.++++
T Consensus 363 vl~v~~~~~~~eai~~~n~~~~gL~~~i~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~pfgG~k~SG~G~~~g~~~~~ 442 (452)
T cd07102 363 VVGIMKVKSDAEAIALMNDSEYGLTASVWTKDIARAEALGEQLETGTVFMNRCDYLDPALAWTGVKDSGRGVTLSRLGYD 442 (452)
T ss_pred eEEEEEeCCHHHHHHHHhCCCCCceEEEEcCCHHHHHHHHHHcCcceEEECCCCCCCCCCCCCCccccccCccchHHHHH
Confidence 99999999999999999999999999999999999999999999999999998766778999999999999999999999
Q ss_pred hhhcccEEE
Q 015031 397 NYLQVKSVV 405 (414)
Q Consensus 397 ~~~~~k~i~ 405 (414)
+||++|+++
T Consensus 443 ~~~~~k~~~ 451 (452)
T cd07102 443 QLTRPKSYH 451 (452)
T ss_pred HHhceeEEe
Confidence 999999985
|
PCC 7335 (EDX86601). Uncharacterized aldehyde dehydrogenase of Synechococcus sp. PCC 7335 (locus EDX86601) and other similar sequences, are present in this CD. |
| >cd07095 ALDH_SGSD_AstD N-succinylglutamate 5-semialdehyde dehydrogenase, AstD-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.7e-85 Score=657.61 Aligned_cols=400 Identities=30% Similarity=0.445 Sum_probs=370.5
Q ss_pred CHHHHHHHHHhHHHHHHHHHHHcCCChHHHhhccHHHHHHHHHHHHHhhhhhcCceeccccCccccccccCCcEEEEEcC
Q 015031 1 MLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMSRALQGYTLREPIGVVGHIIP 80 (414)
Q Consensus 1 L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p 80 (414)
|+++++.|++|+++|++++++|+|||..++ ..|+..+++.++++++...+..+.......+...+++++|+|||++|+|
T Consensus 28 L~~~a~~l~~~~~~la~~~~~e~Gk~~~ea-~~ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~P 106 (431)
T cd07095 28 LRRFAELLKANKEELARLISRETGKPLWEA-QTEVAAMAGKIDISIKAYHERTGERATPMAQGRAVLRHRPHGVMAVFGP 106 (431)
T ss_pred HHHHHHHHHhHHHHHHHHHHHHcCCCHHHH-HHHHHHHHHHHHHHHHHHHHhcCCcccCCCCceEEEEEecceEEEEECC
Confidence 578999999999999999999999999975 5799999999999988776655443222235567889999999999999
Q ss_pred CCcChHhhHHHHHHHHhcCCeEEEecCCCChhHHHHHHHHHHHcCCCCCeEEEEcCCchhHHHHHHhCCCcCeEEEeCCH
Q 015031 81 WNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGST 160 (414)
Q Consensus 81 ~n~P~~~~~~~~~~ALaaGN~vv~kps~~~~~~~~~l~~~~~~aglp~g~v~~~~~~~~~~~~~l~~~~~~~~v~~tGs~ 160 (414)
||||++..++++++||++||+||+|||+.+|.++..+.+++.++|+|+|+++++++ +.+.++.|+.|+++|.|.||||+
T Consensus 107 wN~P~~~~~~~~~~ALaaGN~VI~Kps~~~~~~~~~l~~~~~~ag~P~g~~~~v~g-~~~~~~~l~~~~~v~~v~ftGs~ 185 (431)
T cd07095 107 FNFPGHLPNGHIVPALLAGNTVVFKPSELTPAVAELMVELWEEAGLPPGVLNLVQG-GRETGEALAAHEGIDGLLFTGSA 185 (431)
T ss_pred CchHHHHHHHHHHHHHhcCCEEEeeCCCCCcHHHHHHHHHHHHhCcChhHheEEeC-cHHHHHHHhcCCCCCEEEEECcH
Confidence 99999999999999999999999999999999999999999999999999999998 45778999999999999999999
Q ss_pred HHHHHHHHHHhhCCCCceeeeCCCCCceeecCCCCHHHHHHHHHHHHhcccCCccccCcEEEEeCc-cHHHHHHHHHHHH
Q 015031 161 DVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEG-IYDEFEKKLVEKA 239 (414)
Q Consensus 161 ~~~~~i~~~~~~~~~~~~~~e~gG~~~~iV~~dadl~~a~~~i~~~~~~~~Gq~C~a~~~v~V~~~-~~~~f~~~l~~~~ 239 (414)
.+|+.|.+.++.+..+++++|+|||||+||++|||++.|++.+++++|.|+||.|+++++||||++ ++|+|+++|++++
T Consensus 186 ~~g~~i~~~~a~~~~~~~~lElgG~~~~iV~~daDl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~~i~d~f~~~l~~~~ 265 (431)
T cd07095 186 ATGLLLHRQFAGRPGKILALEMGGNNPLVVWDVADIDAAAYLIVQSAFLTAGQRCTCARRLIVPDGAVGDAFLERLVEAA 265 (431)
T ss_pred HHHHHHHHHhhccCCCcEEEECCCCCeEEECCCCCHHHHHHHHHHHHHHhCCCCCCCCeEEEEcCcchHHHHHHHHHHHH
Confidence 999999998764557999999999999999999999999999999999999999999999999999 9999999999999
Q ss_pred hccccCCCCCCCCCccccCCHHHHHHHHHHHHHhhhcCCeEeeCCcccCCCCceeeeEEEEeCCCCCcccccccccceEE
Q 015031 240 KAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIGKKGYYIEPTIFTNVTEDMLIAKNEIFGPVMA 319 (414)
Q Consensus 240 ~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~ 319 (414)
+++++|+|.++++.+||+++..+++++.+++++++++|+++++||...+++|+|++|||+ +++++|.+++||+||||++
T Consensus 266 ~~~~~G~p~~~~~~~gpli~~~~~~~i~~~v~~a~~~ga~~l~gg~~~~~~g~~~~Ptv~-~v~~~~~i~~eE~FgPvl~ 344 (431)
T cd07095 266 KRLRIGAPDAEPPFMGPLIIAAAAARYLLAQQDLLALGGEPLLAMERLVAGTAFLSPGII-DVTDAADVPDEEIFGPLLQ 344 (431)
T ss_pred HhCCCCCCCCCCCCcccccCHHHHHHHHHHHHHHHhcCCEEEeCCCcCCCCCeEEcCEEE-ecCCCChHHhCCCcCCeEE
Confidence 999999999999999999999999999999999999999999999765557999999999 6899999999999999999
Q ss_pred EeeeCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHHhccceeEEEECCcCC-CCCCCCccCCCCCCCCCcchHHHHHhh
Q 015031 320 LMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSIRAGIIWINCYFA-FDSDCPYGGYKMSGFGRDCGLESLHNY 398 (414)
Q Consensus 320 v~~~~~~~eai~~~n~~~~gl~~sv~s~d~~~~~~~~~~l~~g~v~vN~~~~-~~~~~pfgG~~~sG~g~~~g~~~~~~~ 398 (414)
|++|+|.+|||+++|+++|||++||||+|.+.++++++++++|+|+||++.. ..+.+||||+|.||+|+++|.+|+++|
T Consensus 345 v~~~~~~~eai~~~n~~~~gL~a~v~s~d~~~a~~~~~~l~~G~v~iN~~~~~~~~~~PfGG~k~SG~G~~~g~~~~~~~ 424 (431)
T cd07095 345 VYRYDDFDEAIALANATRFGLSAGLLSDDEALFERFLARIRAGIVNWNRPTTGASSTAPFGGVGLSGNHRPSAYYAADYC 424 (431)
T ss_pred EEeeCCHHHHHHHHhCCCCCCeEEEEcCCHHHHHHHHHhCCcceEEECCCCCCCCCCCCCCCcccccCCCCChHHHHHHH
Confidence 9999999999999999999999999999999999999999999999998765 345689999999999999999999955
Q ss_pred hcccEE
Q 015031 399 LQVKSV 404 (414)
Q Consensus 399 ~~~k~i 404 (414)
+ .|++
T Consensus 425 ~-~~~~ 429 (431)
T cd07095 425 A-YPVA 429 (431)
T ss_pred h-hhhc
Confidence 4 4443
|
N-succinylglutamate 5-semialdehyde dehydrogenase or succinylglutamic semialdehyde dehydrogenase (SGSD, E. coli AstD, EC=1.2.1.71) involved in L-arginine degradation via the arginine succinyltransferase (AST) pathway and catalyzes the NAD+-dependent reduction of succinylglutamate semialdehyde into succinylglutamate. |
| >cd07138 ALDH_CddD_SSP0762 Rhodococcus ruber 6-oxolauric acid dehydrogenase-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.9e-85 Score=665.28 Aligned_cols=399 Identities=42% Similarity=0.701 Sum_probs=375.0
Q ss_pred CHHHHHHHHHhHHHHHHHHHHHcCCChHHHhhccHHHHHHHHHHHHHhhhhhcCceeccccCccccccccCCcEEEEEcC
Q 015031 1 MLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMSRALQGYTLREPIGVVGHIIP 80 (414)
Q Consensus 1 L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p 80 (414)
|+++++.|++|+++|++++++|+|||..++...|+..+++.++++++.+++...... ....+.+++|+|||++|+|
T Consensus 64 L~~~a~~l~~~~~~la~~~~~e~Gk~~~~~~~~ev~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~P~GVv~~I~p 139 (466)
T cd07138 64 LERIAEAYEARADELAQAITLEMGAPITLARAAQVGLGIGHLRAAADALKDFEFEER----RGNSLVVREPIGVCGLITP 139 (466)
T ss_pred HHHHHHHHHHhHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHhhhhcccccc----CceEEEEEeecceEEEECC
Confidence 578999999999999999999999999876556999999999999987766543221 2245678999999999999
Q ss_pred CCcChHhhHHHHHHHHhcCCeEEEecCCCChhHHHHHHHHHHHcCCCCCeEEEEcCCchhHHHHHHhCCCcCeEEEeCCH
Q 015031 81 WNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGST 160 (414)
Q Consensus 81 ~n~P~~~~~~~~~~ALaaGN~vv~kps~~~~~~~~~l~~~~~~aglp~g~v~~~~~~~~~~~~~l~~~~~~~~v~~tGs~ 160 (414)
||||+...++++++||++||+||+|||+.+|.++..+.+++.++|+|+|++|++++++.+.+..|+.||+++.|.||||+
T Consensus 140 ~N~P~~~~~~~~~~ALaaGN~Vv~Kps~~~p~~~~~l~~~~~~aGlP~g~v~~v~g~~~~~~~~l~~~~~v~~v~fTGs~ 219 (466)
T cd07138 140 WNWPLNQIVLKVAPALAAGCTVVLKPSEVAPLSAIILAEILDEAGLPAGVFNLVNGDGPVVGEALSAHPDVDMVSFTGST 219 (466)
T ss_pred CccHHHHHHHHHHHHHhcCCEEEEECCCcCcHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHHhcCCCCCEEEEECcH
Confidence 99999999999999999999999999999999999999999999999999999999777789999999999999999999
Q ss_pred HHHHHHHHHHhhCCCCceeeeCCCCCceeecCCCCHHHHHHHHHHHHhcccCCccccCcEEEEeCccHHHHHHHHHHHHh
Q 015031 161 DVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAK 240 (414)
Q Consensus 161 ~~~~~i~~~~~~~~~~~~~~e~gG~~~~iV~~dadl~~a~~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f~~~l~~~~~ 240 (414)
.+|+.|.+.++ .+++|+++|+||+||+||++|||++.|++.+++++|.|+||.|+++++||||++++|+|+++|+++++
T Consensus 220 ~~g~~i~~~aa-~~~~~v~lElgG~~p~iV~~dADl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~ 298 (466)
T cd07138 220 RAGKRVAEAAA-DTVKRVALELGGKSANIILDDADLEKAVPRGVAACFANSGQSCNAPTRMLVPRSRYAEAEEIAAAAAE 298 (466)
T ss_pred HHHHHHHHHHh-ccCCeEEEECCCCCeeEECCCCCHHHHHHHHHHHHHhccCCCCcCCcEEEEeHhHHHHHHHHHHHHHH
Confidence 99999999987 78899999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccCCCCCCCCCccccCCHHHHHHHHHHHHHhhhcCCeEeeCCcccC---CCCceeeeEEEEeCCCCCcccccccccce
Q 015031 241 AWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIG---KKGYYIEPTIFTNVTEDMLIAKNEIFGPV 317 (414)
Q Consensus 241 ~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~---~~g~~~~Ptvl~~~~~~~~~~~~E~fgPv 317 (414)
++++|+|.++++++||++++.+++++++++++++++|+++++||.... ..|+|++|||+.+++++|++++||+||||
T Consensus 299 ~~~~g~p~~~~~~~gpli~~~~~~~~~~~v~~a~~~Ga~~l~gg~~~~~~~~~g~~~~Ptvl~~~~~~~~i~~eE~fgPv 378 (466)
T cd07138 299 AYVVGDPRDPATTLGPLASAAQFDRVQGYIQKGIEEGARLVAGGPGRPEGLERGYFVKPTVFADVTPDMTIAREEIFGPV 378 (466)
T ss_pred hcCCCCCCCCCCcCCccCCHHHHHHHHHHHHHHHHCCCEEEeCCCcCCCcCCCCceECCEEecCCCCCChHHhCCCCCce
Confidence 999999999999999999999999999999999999999999996432 35899999999999999999999999999
Q ss_pred EEEeeeCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHHhccceeEEEECCcCCCCCCCCccCCCCCCCCCcchHHHHHh
Q 015031 318 MALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSIRAGIIWINCYFAFDSDCPYGGYKMSGFGRDCGLESLHN 397 (414)
Q Consensus 318 l~v~~~~~~~eai~~~n~~~~gl~~sv~s~d~~~~~~~~~~l~~g~v~vN~~~~~~~~~pfgG~~~sG~g~~~g~~~~~~ 397 (414)
++|++|+|.||||+++|+++|||+++|||+|.+.++++++++++|+|+||+.. ..+.+||||+|.||+|+++|.+++++
T Consensus 379 l~v~~~~~~~eai~~~n~~~~gL~a~i~t~d~~~a~~~~~~l~~G~v~iN~~~-~~~~~PfgG~k~SG~G~~~g~~~~~~ 457 (466)
T cd07138 379 LSIIPYDDEDEAIAIANDTPYGLAGYVWSADPERARAVARRLRAGQVHINGAA-FNPGAPFGGYKQSGNGREWGRYGLEE 457 (466)
T ss_pred EEEeccCCHHHHHHHHhCCCCCceEEEEcCCHHHHHHHHHhcCcceEEECCCC-CCCCCCcCCcccccCCccchHHHHHH
Confidence 99999999999999999999999999999999999999999999999999864 56788999999999999999999999
Q ss_pred hhcccEEE
Q 015031 398 YLQVKSVV 405 (414)
Q Consensus 398 ~~~~k~i~ 405 (414)
||++|+++
T Consensus 458 ~~~~k~v~ 465 (466)
T cd07138 458 FLEVKSIQ 465 (466)
T ss_pred hcceeEEe
Confidence 99999875
|
The 6-oxolauric acid dehydrogenase (CddD) from Rhodococcus ruber SC1 which converts 6-oxolauric acid to dodecanedioic acid, and the aldehyde dehydrogenase (locus SSP0762) from Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 and other similar sequences, are included in this CD. |
| >cd07092 ALDH_ABALDH-YdcW Escherichia coli NAD+-dependent gamma-aminobutyraldehyde dehydrogenase YdcW-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.6e-85 Score=661.99 Aligned_cols=402 Identities=42% Similarity=0.704 Sum_probs=377.1
Q ss_pred CHHHHHHHHHhHHHHHHHHHHHcCCChHHHhhccHHHHHHHHHHHHHhhhhhcCceecc-ccCccccccccCCcEEEEEc
Q 015031 1 MLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKM-SRALQGYTLREPIGVVGHII 79 (414)
Q Consensus 1 L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~~~~~~~~~~~~-~~~~~~~~~~~P~Gvv~~i~ 79 (414)
|+++++.|.+++++|++++++|+|||..++...|+..+++.+++++..++...+..... ..+...+.+++|+|||++|+
T Consensus 47 L~~~~~~l~~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~I~ 126 (450)
T cd07092 47 LLKLADAIEENAEELAALESRNTGKPLHLVRDDELPGAVDNFRFFAGAARTLEGPAAGEYLPGHTSMIRREPIGVVAQIA 126 (450)
T ss_pred HHHHHHHHHHhHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHHHHHHHHHhcCcccCccCCCceeEEEEeccceEEEEC
Confidence 57899999999999999999999999976656799999999999998776654432111 12345678999999999999
Q ss_pred CCCcChHhhHHHHHHHHhcCCeEEEecCCCChhHHHHHHHHHHHcCCCCCeEEEEcCCchhHHHHHHhCCCcCeEEEeCC
Q 015031 80 PWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGS 159 (414)
Q Consensus 80 p~n~P~~~~~~~~~~ALaaGN~vv~kps~~~~~~~~~l~~~~~~aglp~g~v~~~~~~~~~~~~~l~~~~~~~~v~~tGs 159 (414)
|||||++..++++++||++||+||+|||+.+|.++..+.+++.+ |+|+|+++++++++.+.++.|+.|+++|.|.||||
T Consensus 127 P~N~P~~~~~~~~~~AL~aGN~VIlKps~~~~~~~~~l~~~~~~-glP~g~~~~v~g~~~~~~~~l~~~~~v~~V~fTGs 205 (450)
T cd07092 127 PWNYPLMMAAWKIAPALAAGNTVVLKPSETTPLTTLLLAELAAE-VLPPGVVNVVCGGGASAGDALVAHPRVRMVSLTGS 205 (450)
T ss_pred CCCcHHHHHHHHHHHHHHcCCEEEEECCccchHHHHHHHHHHHh-cCCcccEEEeecCchHHHHHHhcCCCCCEEEEECc
Confidence 99999999999999999999999999999999999999999999 99999999999877778899999999999999999
Q ss_pred HHHHHHHHHHHhhCCCCceeeeCCCCCceeecCCCCHHHHHHHHHHHHhcccCCccccCcEEEEeCccHHHHHHHHHHHH
Q 015031 160 TDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKA 239 (414)
Q Consensus 160 ~~~~~~i~~~~~~~~~~~~~~e~gG~~~~iV~~dadl~~a~~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f~~~l~~~~ 239 (414)
+.+|+.|.+.++ ++++|+++|+||+||+||++|||++.|++.+++++|+|+||.|+++++||||++++|+|+++|++++
T Consensus 206 ~~~g~~v~~~a~-~~~~~~~lelgG~~p~iV~~dAdl~~aa~~iv~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~l~~~~ 284 (450)
T cd07092 206 VRTGKKVARAAA-DTLKRVHLELGGKAPVIVFDDADLDAAVAGIATAGYYNAGQDCTAACRVYVHESVYDEFVAALVEAV 284 (450)
T ss_pred HHHHHHHHHHHh-hcCCcEEEECCCCCeeEECCCCCHHHHHHHHHHHHHhhCCCCCCCCcEEEEeHHHHHHHHHHHHHHH
Confidence 999999999987 7899999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hccccCCCCCCCCCccccCCHHHHHHHHHHHHHhhhcCCeEeeCCcccCCCCceeeeEEEEeCCCCCcccccccccceEE
Q 015031 240 KAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIGKKGYYIEPTIFTNVTEDMLIAKNEIFGPVMA 319 (414)
Q Consensus 240 ~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~ 319 (414)
+++++|+|.++++++||++++.++++++++++++. +|+++++||....+.|+|++|||+.+++++|++++||+||||++
T Consensus 285 ~~~~~g~p~~~~~~~gpli~~~~~~~i~~~i~~a~-~ga~~~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~ 363 (450)
T cd07092 285 SAIRVGDPDDEDTEMGPLNSAAQRERVAGFVERAP-AHARVLTGGRRAEGPGYFYEPTVVAGVAQDDEIVQEEIFGPVVT 363 (450)
T ss_pred hhCCcCCCCCCCCccCcccCHHHHHHHHHHHHHHH-cCCEEEeCCCCCCCCccEEeeEEEEcCCCCChHHhCCCcCceEE
Confidence 99999999999999999999999999999999998 99999999986545789999999999999999999999999999
Q ss_pred EeeeCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHHhccceeEEEECCcCCCCCCCCccCCCCCCCCCcchHHHHHhhh
Q 015031 320 LMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSIRAGIIWINCYFAFDSDCPYGGYKMSGFGRDCGLESLHNYL 399 (414)
Q Consensus 320 v~~~~~~~eai~~~n~~~~gl~~sv~s~d~~~~~~~~~~l~~g~v~vN~~~~~~~~~pfgG~~~sG~g~~~g~~~~~~~~ 399 (414)
|++|+|+||||+++|++++||++||||+|.+.++++++++++|.|+||++....+.+||||+|.||+|+++|++++++|+
T Consensus 364 v~~~~~~deai~~~n~~~~gL~~~vft~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~PfgG~~~SG~G~~~g~~~~~~~~ 443 (450)
T cd07092 364 VQPFDDEDEAIELANDVEYGLASSVWTRDVGRAMRLSARLDFGTVWVNTHIPLAAEMPHGGFKQSGYGKDLSIYALEDYT 443 (450)
T ss_pred EEEECCHHHHHHHHhCCCCCceEEEECCCHHHHHHHHHhcCccEEEECCCCCCCCCCCcCCcccCcCCCCChHHHHHHHh
Confidence 99999999999999999999999999999999999999999999999998777788999999999999999999999999
Q ss_pred cccEEE
Q 015031 400 QVKSVV 405 (414)
Q Consensus 400 ~~k~i~ 405 (414)
+.|+++
T Consensus 444 ~~k~~~ 449 (450)
T cd07092 444 RIKHVM 449 (450)
T ss_pred eeeEEe
Confidence 999985
|
NAD+-dependent, tetrameric, gamma-aminobutyraldehyde dehydrogenase (ABALDH), YdcW of Escherichia coli K12, catalyzes the oxidation of gamma-aminobutyraldehyde to gamma-aminobutyric acid. ABALDH can also oxidize n-alkyl medium-chain aldehydes, but with a lower catalytic efficiency. |
| >PRK09457 astD succinylglutamic semialdehyde dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.5e-85 Score=664.92 Aligned_cols=404 Identities=30% Similarity=0.431 Sum_probs=371.6
Q ss_pred CHHHHHHHHHhHHHHHHHHHHHcCCChHHHhhccHHHHHHHHHHHHHhhhhhcCceeccccCccccccccCCcEEEEEcC
Q 015031 1 MLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMSRALQGYTLREPIGVVGHIIP 80 (414)
Q Consensus 1 L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p 80 (414)
|+++++.|++++++|++++++|+|||..++ ..|+..+++.+++++++..+..+.......+...+++++|+|||++|+|
T Consensus 65 L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a-~~ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~P 143 (487)
T PRK09457 65 VERFAALLEENKEELAEVIARETGKPLWEA-ATEVTAMINKIAISIQAYHERTGEKRSEMADGAAVLRHRPHGVVAVFGP 143 (487)
T ss_pred HHHHHHHHHhHHHHHHHHHHHHhCCCHHHH-HHHHHHHHHHHHHHHHHHHHhcCceeccCCCceeEEEEeccEEEEEECC
Confidence 578999999999999999999999999976 4799999999999887765544433322234456889999999999999
Q ss_pred CCcChHhhHHHHHHHHhcCCeEEEecCCCChhHHHHHHHHHHHcCCCCCeEEEEcCCchhHHHHHHhCCCcCeEEEeCCH
Q 015031 81 WNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGST 160 (414)
Q Consensus 81 ~n~P~~~~~~~~~~ALaaGN~vv~kps~~~~~~~~~l~~~~~~aglp~g~v~~~~~~~~~~~~~l~~~~~~~~v~~tGs~ 160 (414)
||||+...++++++||++||+||+|||+.+|.++..+.+++.++|+|+|++|++++ +.+.++.|+.||++|.|.||||+
T Consensus 144 wN~P~~~~~~~~~~ALaaGN~VvlKPs~~tp~t~~~l~~l~~~aGlP~gvv~~v~g-~~~~~~~L~~~~~v~~V~fTGS~ 222 (487)
T PRK09457 144 YNFPGHLPNGHIVPALLAGNTVVFKPSELTPWVAELTVKLWQQAGLPAGVLNLVQG-GRETGKALAAHPDIDGLLFTGSA 222 (487)
T ss_pred CchHHHHHHHHHHHHHHcCCEEEEECCCCCcHHHHHHHHHHHHhCcCcCeEEEEeC-CHHHHHHHhcCCCcCEEEEECCH
Confidence 99999999999999999999999999999999999999999999999999999998 56789999999999999999999
Q ss_pred HHHHHHHHHHhhCCCCceeeeCCCCCceeecCCCCHHHHHHHHHHHHhcccCCccccCcEEEEeCccH-HHHHHHHHHHH
Q 015031 161 DVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIY-DEFEKKLVEKA 239 (414)
Q Consensus 161 ~~~~~i~~~~~~~~~~~~~~e~gG~~~~iV~~dadl~~a~~~i~~~~~~~~Gq~C~a~~~v~V~~~~~-~~f~~~l~~~~ 239 (414)
++|+.|.+.++....+++++|+|||||+||++|||++.|++.+++++|.|+||.|+++++||||+++| |+|+++|++++
T Consensus 223 ~~G~~i~~~aa~~~~~~~~lElGGk~p~IV~~dADl~~aa~~i~~~~f~~~GQ~C~a~~rv~V~~~i~~d~f~~~l~~~~ 302 (487)
T PRK09457 223 NTGYLLHRQFAGQPEKILALEMGGNNPLVIDEVADIDAAVHLIIQSAFISAGQRCTCARRLLVPQGAQGDAFLARLVAVA 302 (487)
T ss_pred HHHHHHHHHHhhcCCCcEEEecCCCCeEEECCCCCHHHHHHHHHHHHhhccCCCCCCCceEEEeccccHHHHHHHHHHHH
Confidence 99999999876445678999999999999999999999999999999999999999999999999998 99999999999
Q ss_pred hccccCCCC-CCCCCccccCCHHHHHHHHHHHHHhhhcCCeEeeCCcccCCCCceeeeEEEEeCCCCCcccccccccceE
Q 015031 240 KAWVVGDPF-DPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIGKKGYYIEPTIFTNVTEDMLIAKNEIFGPVM 318 (414)
Q Consensus 240 ~~~~~g~~~-~~~~~~gpl~~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl 318 (414)
+++++|+|. ++.+++||+++.++++++.+++++++++|+++++||...+++|+|++|||+ +++++|++++||+||||+
T Consensus 303 ~~~~vG~p~~~~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~~~~gg~~~~~~g~~~~PTvl-~v~~~~~i~~eE~FGPVl 381 (487)
T PRK09457 303 KRLTVGRWDAEPQPFMGAVISEQAAQGLVAAQAQLLALGGKSLLEMTQLQAGTGLLTPGII-DVTGVAELPDEEYFGPLL 381 (487)
T ss_pred hcCcCCCCCcCCCCccCCCcCHHHHHHHHHHHHHHHHCCCEEEeCCCccCCCCeeEecEEe-ccCCCChHHhCCCcCCeE
Confidence 999999996 788999999999999999999999999999999988665456899999999 799999999999999999
Q ss_pred EEeeeCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHHhccceeEEEECCcCC-CCCCCCccCCCCCCCCCcchHHHHHh
Q 015031 319 ALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSIRAGIIWINCYFA-FDSDCPYGGYKMSGFGRDCGLESLHN 397 (414)
Q Consensus 319 ~v~~~~~~~eai~~~n~~~~gl~~sv~s~d~~~~~~~~~~l~~g~v~vN~~~~-~~~~~pfgG~~~sG~g~~~g~~~~~~ 397 (414)
+|++|+|.||||+++|+++|||+++|||+|.+.++++++++++|.|+||+... ..+.+||||+|.||+|+++|..+ .+
T Consensus 382 ~V~~~~~~deai~~~N~~~~gL~a~v~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~~PfGG~k~SG~G~~~g~~~-~~ 460 (487)
T PRK09457 382 QVVRYDDFDEAIRLANNTRFGLSAGLLSDDREDYDQFLLEIRAGIVNWNKPLTGASSAAPFGGVGASGNHRPSAYYA-AD 460 (487)
T ss_pred EEEEeCCHHHHHHHHhCCCCCceEEEEcCCHHHHHHHHHhCCcceEEEECCCCCCCCCCCCCCcccccCCCCCchhH-hh
Confidence 99999999999999999999999999999999999999999999999998755 34578999999999999999555 55
Q ss_pred hhcccEEEEeC
Q 015031 398 YLQVKSVVTPI 408 (414)
Q Consensus 398 ~~~~k~i~~~~ 408 (414)
|++.|+++.+.
T Consensus 461 ~~~~k~~~~~~ 471 (487)
T PRK09457 461 YCAYPMASLES 471 (487)
T ss_pred heeeeEEEEec
Confidence 99999998874
|
|
| >cd07094 ALDH_F21_LactADH-like ALDH subfamily: NAD+-dependent, lactaldehyde dehydrogenase, ALDH family 21 A1, and related proteins | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.7e-85 Score=662.15 Aligned_cols=398 Identities=37% Similarity=0.636 Sum_probs=374.7
Q ss_pred CHHHHHHHHHhHHHHHHHHHHHcCCChHHHhhccHHHHHHHHHHHHHhhhhhcCceeccc-----cCccccccccCCcEE
Q 015031 1 MLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMS-----RALQGYTLREPIGVV 75 (414)
Q Consensus 1 L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~P~Gvv 75 (414)
|+++++.|++++++|++++++|+|||..++ ..|+..+++.+++++..+++..+...+.. .+...+..++|+|||
T Consensus 49 L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a-~~ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv 127 (453)
T cd07094 49 LERAADLLKKRAEEFAKIIACEGGKPIKDA-RVEVDRAIDTLRLAAEEAERIRGEEIPLDATQGSDNRLAWTIREPVGVV 127 (453)
T ss_pred HHHHHHHHHHhHHHHHHHHHHHcCCCHHHH-HHHHHHHHHHHHHHHHHHHHhcCccccccccccCCCceEEEEEeccceE
Confidence 578999999999999999999999999975 46999999999999988877655433322 234567789999999
Q ss_pred EEEcCCCcChHhhHHHHHHHHhcCCeEEEecCCCChhHHHHHHHHHHHcCCCCCeEEEEcCCchhHHHHHHhCCCcCeEE
Q 015031 76 GHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVS 155 (414)
Q Consensus 76 ~~i~p~n~P~~~~~~~~~~ALaaGN~vv~kps~~~~~~~~~l~~~~~~aglp~g~v~~~~~~~~~~~~~l~~~~~~~~v~ 155 (414)
++|+|||||+...++++++||++||+||+|||+.+|.++..+++++.++|+|+|+++++++++.+.++.|+.||++|.|.
T Consensus 128 ~~I~p~N~P~~~~~~~~~~AL~aGN~VI~Kps~~~p~~~~~l~~~l~~ag~P~g~~~~v~g~~~~~~~~l~~~~~v~~V~ 207 (453)
T cd07094 128 LAITPFNFPLNLVAHKLAPAIATGCPVVLKPASKTPLSALELAKILVEAGVPEGVLQVVTGEREVLGDAFAADERVAMLS 207 (453)
T ss_pred EEECCCccHHHHHHHHHHHHHHcCCEEEEECCCcchHHHHHHHHHHHHcCCCcCcEEEEeCCCchHHHHHhcCCCCCEEE
Confidence 99999999999999999999999999999999999999999999999999999999999997777899999999999999
Q ss_pred EeCCHHHHHHHHHHHhhCCCCceeeeCCCCCceeecCCCCHHHHHHHHHHHHhcccCCccccCcEEEEeCccHHHHHHHH
Q 015031 156 FTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKL 235 (414)
Q Consensus 156 ~tGs~~~~~~i~~~~~~~~~~~~~~e~gG~~~~iV~~dadl~~a~~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f~~~l 235 (414)
||||+++|+.|.+.+ ..+|+++|+|||||+||++|||++.|++.+++++|.|+||.|+++++||||++++|+|+++|
T Consensus 208 fTGs~~~g~~v~~~a---~~~~~~lelGGk~~~iV~~dadl~~aa~~i~~~~~~~~GQ~C~a~~~i~V~~~i~d~f~~~L 284 (453)
T cd07094 208 FTGSAAVGEALRANA---GGKRIALELGGNAPVIVDRDADLDAAIEALAKGGFYHAGQVCISVQRIYVHEELYDEFIEAF 284 (453)
T ss_pred EECcHHHHHHHHHHc---CCCceEEecCCCCceEECCCCCHHHHHHHHHHHHHHhcCCCCcCCeEEEEeHHHHHHHHHHH
Confidence 999999999999885 47899999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhccccCCCCCCCCCccccCCHHHHHHHHHHHHHhhhcCCeEeeCCcccCCCCceeeeEEEEeCCCCCccccccccc
Q 015031 236 VEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIGKKGYYIEPTIFTNVTEDMLIAKNEIFG 315 (414)
Q Consensus 236 ~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fg 315 (414)
+++++++++|+|.++++++||++++.+++++++++++++++|+++++||.. .|+|++|||+.+++++|+++++|+||
T Consensus 285 ~~~~~~~~~g~p~~~~~~~gpli~~~~~~~~~~~i~~a~~~Ga~v~~gg~~---~g~~~~Ptvl~~~~~~~~i~~~E~Fg 361 (453)
T cd07094 285 VAAVKKLKVGDPLDEDTDVGPLISEEAAERVERWVEEAVEAGARLLCGGER---DGALFKPTVLEDVPRDTKLSTEETFG 361 (453)
T ss_pred HHHHHhccCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCEEEeCccC---CCeEEeCEEEeCCCCCChhhhCCCcC
Confidence 999999999999999999999999999999999999999999999999864 58899999999999999999999999
Q ss_pred ceEEEeeeCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHHhccceeEEEECCcCCC-CCCCCccCCCCCCCCCcchHHH
Q 015031 316 PVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSIRAGIIWINCYFAF-DSDCPYGGYKMSGFGRDCGLES 394 (414)
Q Consensus 316 Pvl~v~~~~~~~eai~~~n~~~~gl~~sv~s~d~~~~~~~~~~l~~g~v~vN~~~~~-~~~~pfgG~~~sG~g~~~g~~~ 394 (414)
||++|++|+|+||||+++|+++|||++||||+|.+.++++++++++|+|+||++... .+.+||||+|.||+|+++|++|
T Consensus 362 Pvl~v~~~~~~~eai~~~n~~~~gL~~~i~t~d~~~a~~~~~~l~~g~v~iN~~~~~~~~~~pfgG~~~SG~G~~~g~~~ 441 (453)
T cd07094 362 PVVPIIRYDDFEEAIRIANSTDYGLQAGIFTRDLNVAFKAAEKLEVGGVMVNDSSAFRTDWMPFGGVKESGVGREGVPYA 441 (453)
T ss_pred ceEEEEEeCCHHHHHHHHhCCCCCCeeEEECCCHHHHHHHHHhcCcCeEEEcCCCCCCCCCCCCCCccccccCcCChHHH
Confidence 999999999999999999999999999999999999999999999999999998654 4689999999999999999999
Q ss_pred HHhhhcccEEE
Q 015031 395 LHNYLQVKSVV 405 (414)
Q Consensus 395 ~~~~~~~k~i~ 405 (414)
+++|+++|+|+
T Consensus 442 ~~~~~~~k~i~ 452 (453)
T cd07094 442 MEEMTEEKTVV 452 (453)
T ss_pred HHHHhceeEEe
Confidence 99999999985
|
ALDH subfamily which includes Tortula ruralis aldehyde dehydrogenase ALDH21A1 (RNP123), and NAD+-dependent, lactaldehyde dehydrogenase (EC=1.2.1.22) and like sequences. |
| >cd07083 ALDH_P5CDH ALDH subfamily NAD+-dependent delta(1)-pyrroline-5-carboxylate dehydrogenase-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.8e-85 Score=666.25 Aligned_cols=404 Identities=31% Similarity=0.555 Sum_probs=377.1
Q ss_pred CHHHHHHHHHhHHHHHHHHHHHcCCChHHHhhccHHHHHHHHHHHHHhhhhhcCcee--ccccCccccccccCCcEEEEE
Q 015031 1 MLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVL--KMSRALQGYTLREPIGVVGHI 78 (414)
Q Consensus 1 L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~~~~~~~~~~--~~~~~~~~~~~~~P~Gvv~~i 78 (414)
|+++++.|++++++|++++++|+|||..+ ...|+..+++.++++++.+.+..+... +...+...+++++|+|||++|
T Consensus 83 L~~~a~~l~~~~~ela~~~~~e~Gk~~~~-a~~ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I 161 (500)
T cd07083 83 LLKAADLLRRRRRELIATLTYEVGKNWVE-AIDDVAEAIDFIRYYARAALRLRYPAVEVVPYPGEDNESFYVGLGAGVVI 161 (500)
T ss_pred HHHHHHHHHhCHHHHHHHHHHHhCCCHHH-HHHHHHHHHHHHHHHHHHHHHhcCcccccCCCCCceEEEEEeccceEEEE
Confidence 57899999999999999999999999997 467999999999999998876654321 122455677889999999999
Q ss_pred cCCCcChHhhHHHHHHHHhcCCeEEEecCCCChhHHHHHHHHHHHcCCCCCeEEEEcCCchhHHHHHHhCCCcCeEEEeC
Q 015031 79 IPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTG 158 (414)
Q Consensus 79 ~p~n~P~~~~~~~~~~ALaaGN~vv~kps~~~~~~~~~l~~~~~~aglp~g~v~~~~~~~~~~~~~l~~~~~~~~v~~tG 158 (414)
+|||||+...++++++||++||+||+|||+.+|.++..+.+++.++|+|+|++|++++++.+.+..|+.|+++|.|.|||
T Consensus 162 ~P~N~P~~~~~~~~~~ALaaGN~VVlKPs~~tp~~~~~l~~~~~eaGlP~gvv~~v~g~~~~~~~~L~~~~~v~~v~ftG 241 (500)
T cd07083 162 SPWNFPVAIFTGMIVAPVAVGNTVIAKPAEDAVVVGYKVFEIFHEAGFPPGVVQFLPGVGEEVGAYLTEHERIRGINFTG 241 (500)
T ss_pred cCCccHHHHHHHHHHHHHHcCCeEEEeCCCcchHHHHHHHHHHHHcCCCCCceEEEeCCCchhHHHHhcCCCcCEEEEEC
Confidence 99999999999999999999999999999999999999999999999999999999997778899999999999999999
Q ss_pred CHHHHHHHHHHHhhCCC------CceeeeCCCCCceeecCCCCHHHHHHHHHHHHhcccCCccccCcEEEEeCccHHHHH
Q 015031 159 STDVGRQVMQAAATSNL------KPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFE 232 (414)
Q Consensus 159 s~~~~~~i~~~~~~~~~------~~~~~e~gG~~~~iV~~dadl~~a~~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f~ 232 (414)
|+.+|+.|.+.++ ++. +|+++|+||+||+||++|||++.|++.+++++|.|+||.|++++++|||++++|+|+
T Consensus 242 s~~~g~~v~~~aa-~~~~~~~~~~~v~lElgG~~~~iV~~dadl~~aa~~i~~~~f~~~GQ~C~a~~rv~V~~~i~d~f~ 320 (500)
T cd07083 242 SLETGKKIYEAAA-RLAPGQTWFKRLYVETGGKNAIIVDETADFELVVEGVVVSAFGFQGQKCSAASRLILTQGAYEPVL 320 (500)
T ss_pred cHHHHHHHHHHHh-hccccccccCcEEEecCCCCeEEECCCCCHHHHHHHHHHHHHhhcCCCCCCCeeEEEcHHHHHHHH
Confidence 9999999999887 554 999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhccccCCCCCCCCCccccCCHHHHHHHHHHHHHhhhcCCeEeeCCcccCCCCceeeeEEEEeCCCCCcccccc
Q 015031 233 KKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIGKKGYYIEPTIFTNVTEDMLIAKNE 312 (414)
Q Consensus 233 ~~l~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E 312 (414)
++|+++++++++|+|.++.+++||++++.+++++++++++++..| ++++||....+.|+|+.|||+.+++++|++++||
T Consensus 321 ~~l~~~~~~~~~G~p~~~~~~~Gpli~~~~~~~v~~~i~~a~~~g-~vl~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~eE 399 (500)
T cd07083 321 ERLLKRAERLSVGPPEENGTDLGPVIDAEQEAKVLSYIEHGKNEG-QLVLGGKRLEGEGYFVAPTVVEEVPPKARIAQEE 399 (500)
T ss_pred HHHHHHHHcCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHhCC-EEEeCCCcCCCCCeEEccEEEeCCCCCChHhhCC
Confidence 999999999999999999999999999999999999999999877 9999998765568999999999999999999999
Q ss_pred cccceEEEeeeC--CHHHHHHHHhcCCCCceEEEecCCHHHHHHHHhccceeEEEECCcCCC--CCCCCccCCCCCCCC-
Q 015031 313 IFGPVMALMKFK--TVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSIRAGIIWINCYFAF--DSDCPYGGYKMSGFG- 387 (414)
Q Consensus 313 ~fgPvl~v~~~~--~~~eai~~~n~~~~gl~~sv~s~d~~~~~~~~~~l~~g~v~vN~~~~~--~~~~pfgG~~~sG~g- 387 (414)
+||||++|++|+ |+||||+++|+++|||+++|||+|.+.+.++++++++|+|+||+.... .+.+||||+|.||+|
T Consensus 400 ~FgPvl~v~~~~d~~~~eai~~~n~~~~gL~~~v~t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~~~PfGG~k~SG~G~ 479 (500)
T cd07083 400 IFGPVLSVIRYKDDDFAEALEVANSTPYGLTGGVYSRKREHLEEARREFHVGNLYINRKITGALVGVQPFGGFKLSGTNA 479 (500)
T ss_pred CCCceEEEEEeCCCCHHHHHHHHhCCCCCceEEEEeCCHHHHHHHHHhCCeeEEEECCCCCCCCCCCCCCCccccccCCC
Confidence 999999999999 999999999999999999999999999999999999999999998653 356899999999999
Q ss_pred CcchHHHHHhhhcccEEEEe
Q 015031 388 RDCGLESLHNYLQVKSVVTP 407 (414)
Q Consensus 388 ~~~g~~~~~~~~~~k~i~~~ 407 (414)
+.+|.+++++||++|+++.+
T Consensus 480 ~~~g~~~l~~~~~~k~~~~~ 499 (500)
T cd07083 480 KTGGPHYLRRFLEMKAVAER 499 (500)
T ss_pred cccCHHHHHHhhheeEEEEc
Confidence 68899999999999998754
|
ALDH subfamily of the NAD+-dependent, delta(1)-pyrroline-5-carboxylate dehydrogenases (P5CDH, EC=1.5.1.12). The proline catabolic enzymes, proline dehydrogenase and P5CDH catalyze the two-step oxidation of proline to glutamate. P5CDH catalyzes the oxidation of glutamate semialdehyde, utilizing NAD+ as the electron acceptor. In some bacteria, the two enzymes are fused into the bifunctional flavoenzyme, proline utilization A (PutA). These enzymes play important roles in cellular redox control, superoxide generation, and apoptosis. In certain prokaryotes such as Escherichia coli, PutA is also a transcriptional repressor of the proline utilization genes. Monofunctional enzyme sequences such as those seen in the Bacillus RocA P5CDH are also present in this subfamily as well as the human ALDH4A1 P5CDH and the Drosophila Aldh17 P5CDH. |
| >PF00171 Aldedh: Aldehyde dehydrogenase family; InterPro: IPR015590 Aldehyde dehydrogenases (1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.1e-86 Score=671.15 Aligned_cols=402 Identities=47% Similarity=0.782 Sum_probs=378.2
Q ss_pred CHHHHHHHHHhHHHHHHHHHHHcCCChHHHhhccHHHHHHHHHHHHHhhhhhcCceeccccCccccccccCCcEEEEEcC
Q 015031 1 MLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMSRALQGYTLREPIGVVGHIIP 80 (414)
Q Consensus 1 L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p 80 (414)
|+++++.|++|+++|++++++|+|||..++. .|+..+++.++++++++++..+..++.+.+...+.+++|+|||++|+|
T Consensus 57 L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~-~ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p 135 (462)
T PF00171_consen 57 LERFADLLEERRDELAELIALETGKPIAEAR-GEVDRAIDFLRYYADAARKLAGEVLPSDPGSRNYTRREPLGVVLIITP 135 (462)
T ss_dssp HHHHHHHHHHTHHHHHHHHHHHHTSSHHHHH-HHHHHHHHHHHHHHHHHHHHTEEEEEESTTEEEEEEEEE-SEEEEEE-
T ss_pred HHHHHHHHhhccccccccccccccccccccc-chhhhhhhhhhhhhhcccceehhhcccccccccccccccccceeeccc
Confidence 5789999999999999999999999999865 499999999999999998876665555567889999999999999999
Q ss_pred CCcChHhhHHHHHHHHhcCCeEEEecCCCChhHHHHHHHHHHHcCCCCCeEEEEcCCchhHHHHHHhCCCcCeEEEeCCH
Q 015031 81 WNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGST 160 (414)
Q Consensus 81 ~n~P~~~~~~~~~~ALaaGN~vv~kps~~~~~~~~~l~~~~~~aglp~g~v~~~~~~~~~~~~~l~~~~~~~~v~~tGs~ 160 (414)
||||+...++++++||++||+||+|||+.+|.++..+.+++.++|+|+|++|++++++.+.+..|+.||+++.|.||||+
T Consensus 136 ~n~P~~~~~~~~~~ALaaGN~VVlkps~~~~~~~~~l~~~~~~AglP~gvv~vv~g~~~~~~~~l~~~~~v~~v~ftGs~ 215 (462)
T PF00171_consen 136 WNFPLYLAVWKIAPALAAGNTVVLKPSEQAPLTALLLAELLEEAGLPPGVVNVVPGDGSEVGEALVSHPDVDLVSFTGST 215 (462)
T ss_dssp SSSCTHHHHHHHHHHHHTT-EEEEEEBTTSHHHHHHHHHHHHHHTSTTTSEEEECSSTHHHHHHHHHTTTEEEEEEESEH
T ss_pred ccccccccccchhhhhcccccceeeeccccccccccchhhccccccccccccccccccccccceeeeccccceeeecchh
Confidence 99999999999999999999999999999999999999999999999999999999888999999999999999999999
Q ss_pred HHHHHHHHHHhhCCCCceeeeCCCCCceeecCCCCHHHHHHHHHHHHhcccCCccccCcEEEEeCccHHHHHHHHHHHHh
Q 015031 161 DVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAK 240 (414)
Q Consensus 161 ~~~~~i~~~~~~~~~~~~~~e~gG~~~~iV~~dadl~~a~~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f~~~l~~~~~ 240 (414)
++++.|.+.++ ++++|+++|+||+||+||++|||++.|++.+++++|+|+||.|+++++||||++++|+|+++|+++++
T Consensus 216 ~~g~~i~~~a~-~~~~~v~lelgG~~p~iV~~daDld~aa~~iv~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~l~~~~~ 294 (462)
T PF00171_consen 216 ATGRAIAKAAA-KNLKPVVLELGGKNPVIVDPDADLDKAAEAIVRGAFFNSGQSCTAPSRVLVHESIYDEFVEALKERVA 294 (462)
T ss_dssp HHHHHHHHHHH-TTTSEEEEEECEEEEEEE-TTSHHHHHHHHHHHHHHGGGGTSTTSEEEEEEEHHHHHHHHHHHHHHHH
T ss_pred hhhhhhhhhcc-cccccccccccccceeeEecccccccccccccchhcccccccccccccccccccccchhhhhhhhccc
Confidence 99999999987 88999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccCCCCCCCCCccccCCHHHHHHHHHHHHHhhhcCCeEeeCC---cccCCCCceeeeEEEEeCCCCCcccccccccce
Q 015031 241 AWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGG---KPIGKKGYYIEPTIFTNVTEDMLIAKNEIFGPV 317 (414)
Q Consensus 241 ~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ga~v~~gg---~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPv 317 (414)
++++|+|.++++++||+++..+++++.+++++++.+|+++++|| ......|+|++|||+.+++++|+++++|+||||
T Consensus 295 ~l~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPv 374 (462)
T PF00171_consen 295 KLRVGDPLDESTDVGPLISKAQRERVKALIEDAVAEGAKVLCGGEPQEADPENGFFIPPTVLEDVPPDMPIMQEEIFGPV 374 (462)
T ss_dssp TSEBSSTTSTTCSBCHCSSHHHHHHHHHHHHHHHHTTSEEEEETSSSSBCSSSSTEEEEEEEESEHTTSHHHHSC-SSSE
T ss_pred cccccCCccccccccccccchhhhhccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 99999999999999999999999999999999999999999999 333468999999999999999999999999999
Q ss_pred EEEeeeCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHHhccceeEEEECCcCCCCCC-CCccCCCCCCCCCcchHHHHH
Q 015031 318 MALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSIRAGIIWINCYFAFDSD-CPYGGYKMSGFGRDCGLESLH 396 (414)
Q Consensus 318 l~v~~~~~~~eai~~~n~~~~gl~~sv~s~d~~~~~~~~~~l~~g~v~vN~~~~~~~~-~pfgG~~~sG~g~~~g~~~~~ 396 (414)
++|++|+|+|||++++|+++|||+++|||+|.+.++++++++++|+|+||+++..... +||||+|.||+|+++|.+|++
T Consensus 375 l~v~~~~~~~eai~~~n~~~~gl~a~v~s~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~~pfgG~~~SG~G~~~g~~~l~ 454 (462)
T PF00171_consen 375 LPVVPYDDLDEAIALANDSEYGLTASVFSRDESRAERLARRLEAGRVWINDPPTGDPDGLPFGGFKQSGIGREGGPEGLD 454 (462)
T ss_dssp EEEEEESSHHHHHHHHHHSSEESEEEEECSBHHHHHHHHHHSTSSEEEESSSSTGGTTSSEBE-SGGGEESEBSHHHHHH
T ss_pred ceecccccchhhhhcccccCCCceeEEecccccccccccccccccceeecCCcccccccCCCCCcccccCCcchHHHHHH
Confidence 9999999999999999999999999999999999999999999999999999774443 699999999999999999999
Q ss_pred hhhcccEE
Q 015031 397 NYLQVKSV 404 (414)
Q Consensus 397 ~~~~~k~i 404 (414)
+||+.|+|
T Consensus 455 ~~~~~k~V 462 (462)
T PF00171_consen 455 EFTQIKTV 462 (462)
T ss_dssp GTEEEEEE
T ss_pred HhCCccCC
Confidence 99999986
|
2.1.3 from EC and 1.2.1.5 from EC) are enzymes that oxidize a wide variety of aliphatic and aromatic aldehydes using NADP as a cofactor. In mammals at least four different forms of the enzyme are known []: class-1 (or Ald C) a tetrameric cytosolic enzyme, class-2 (or Ald M) a tetrameric mitochondrial enzyme, class- 3 (or Ald D) a dimeric cytosolic enzyme, and class IV a microsomal enzyme. Aldehyde dehydrogenases have also been sequenced from fungal and bacterial species. A number of enzymes are known to be evolutionary related to aldehyde dehydrogenases. A glutamic acid and a cysteine residue have been implicated in the catalytic activity of mammalian aldehyde dehydrogenase. These residues are conserved in all the enzymes of this entry. Some of the proteins in this entry are allergens. Allergies are hypersensitivity reactions of the immune system to specific substances called allergens (such as pollen, stings, drugs, or food) that, in most people, result in no symptoms. A nomenclature system has been established for antigens (allergens) that cause IgE-mediated atopic allergies in humans [WHO/IUIS Allergen Nomenclature Subcommittee King T.P., Hoffmann D., Loewenstein H., Marsh D.G., Platts-Mills T.A.E., Thomas W. Bull. World Health Organ. 72:797-806(1994)]. This nomenclature system is defined by a designation that is composed of the first three letters of the genus; a space; the first letter of the species name; a space and an arabic number. In the event that two species names have identical designations, they are discriminated from one another by adding one or more letters (as necessary) to each species designation. The allergens in this family include allergens with the following designations: Alt a 10 and Cla h 3.; GO: 0016491 oxidoreductase activity, 0008152 metabolic process, 0055114 oxidation-reduction process; PDB: 3R31_A 3HAZ_A 1UXQ_A 1UXP_A 1UXR_A 1UXU_A 1UXN_A 1KY8_A 1UXT_A 1UXV_A .... |
| >PRK09407 gabD2 succinic semialdehyde dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-84 Score=667.24 Aligned_cols=403 Identities=38% Similarity=0.611 Sum_probs=375.2
Q ss_pred CHHHHHHHHHhHHHHHHHHHHHcCCChHHHhhccHHHHHHHHHHHHHhhhhhcCcee-cc--ccCccccccccCCcEEEE
Q 015031 1 MLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVL-KM--SRALQGYTLREPIGVVGH 77 (414)
Q Consensus 1 L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~~~~~~~~~~-~~--~~~~~~~~~~~P~Gvv~~ 77 (414)
|+++++.|++++++|++++++|+|||..++ ..|+..+++.+++++..+++..+... .. ......+..++|+|||++
T Consensus 82 L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a-~~ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVV~~ 160 (524)
T PRK09407 82 LLRFHDLVLENREELLDLVQLETGKARRHA-FEEVLDVALTARYYARRAPKLLAPRRRAGALPVLTKTTELRQPKGVVGV 160 (524)
T ss_pred HHHHHHHHHHhHHHHHHHHHHHcCCCHHHH-HHHHHHHHHHHHHHHHHHHHhhCCccccccCCCCceEEEEEecceEEEE
Confidence 578999999999999999999999999875 57999999999999988766544321 11 112457788999999999
Q ss_pred EcCCCcChHhhHHHHHHHHhcCCeEEEecCCCChhHHHHHHHHHHHcCCCCCeEEEEcCCchhHHHHHHhCCCcCeEEEe
Q 015031 78 IIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFT 157 (414)
Q Consensus 78 i~p~n~P~~~~~~~~~~ALaaGN~vv~kps~~~~~~~~~l~~~~~~aglp~g~v~~~~~~~~~~~~~l~~~~~~~~v~~t 157 (414)
|+|||||++..++++++||++||+||+|||+.+|.++..+.+++.++|+|+|+++++++++.+.++.|++| +|.|.||
T Consensus 161 I~P~N~Pl~~~~~~~~~ALaaGN~VIlKPs~~tp~~~~~l~~ll~eaGlP~gvv~~v~g~~~~~~~~L~~~--~d~V~fT 238 (524)
T PRK09407 161 ISPWNYPLTLAVSDAIPALLAGNAVVLKPDSQTPLTALAAVELLYEAGLPRDLWQVVTGPGPVVGTALVDN--ADYLMFT 238 (524)
T ss_pred EeCCCChHHHHHHHHHHHHHcCCEEEEECCCCCHHHHHHHHHHHHHcCCCcccEEEEecCCchHHHHHHhc--CCEEEEE
Confidence 99999999999999999999999999999999999999999999999999999999999877888999876 7899999
Q ss_pred CCHHHHHHHHHHHhhCCCCceeeeCCCCCceeecCCCCHHHHHHHHHHHHhcccCCccccCcEEEEeCccHHHHHHHHHH
Q 015031 158 GSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVE 237 (414)
Q Consensus 158 Gs~~~~~~i~~~~~~~~~~~~~~e~gG~~~~iV~~dadl~~a~~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f~~~l~~ 237 (414)
||+.+|+.|.+.++ ++.+|+++|+|||||+||++|||++.|++.+++++|.|+||.|+++++||||++++|+|+++|++
T Consensus 239 Gs~~~g~~v~~~aa-~~~~~v~lElGGknp~iV~~dADl~~Aa~~i~~~~f~~sGQ~C~a~~rv~V~~~v~d~f~~~L~~ 317 (524)
T PRK09407 239 GSTATGRVLAEQAG-RRLIGFSLELGGKNPMIVLDDADLDKAAAGAVRACFSNAGQLCISIERIYVHESIYDEFVRAFVA 317 (524)
T ss_pred CCHHHHHHHHHHHH-hcCCcEEEECCCCceeEECCCCCHHHHHHHHHHHHHhcCCCCCCCCcEEEEcHHHHHHHHHHHHH
Confidence 99999999999987 78899999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhccccCCCCCCCCCccccCCHHHHHHHHHHHHHhhhcCCeEeeCCcccC-CCCceeeeEEEEeCCCCCcccccccccc
Q 015031 238 KAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIG-KKGYYIEPTIFTNVTEDMLIAKNEIFGP 316 (414)
Q Consensus 238 ~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~-~~g~~~~Ptvl~~~~~~~~~~~~E~fgP 316 (414)
+++++++|+|.++++++||++++.+++++++++++++++|+++++||.... .+|+|++|||+.+++++|.+++||+|||
T Consensus 318 ~~~~l~~G~~~~~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~vl~gG~~~~~~~g~~~~Ptvl~~v~~~~~i~~eE~FGP 397 (524)
T PRK09407 318 AVRAMRLGAGYDYSADMGSLISEAQLETVSAHVDDAVAKGATVLAGGKARPDLGPLFYEPTVLTGVTPDMELAREETFGP 397 (524)
T ss_pred HHHhcCCCCCCCcCCccCCCCCHHHHHHHHHHHHHHHhCCCEEEeCCccCCCCCCceEeCEEEeCCCCCChHHhCCCCCC
Confidence 999999999999999999999999999999999999999999999997532 2579999999999999999999999999
Q ss_pred eEEEeeeCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHHhccceeEEEECCcCC---CCCCCCccCCCCCCCCCcchHH
Q 015031 317 VMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSIRAGIIWINCYFA---FDSDCPYGGYKMSGFGRDCGLE 393 (414)
Q Consensus 317 vl~v~~~~~~~eai~~~n~~~~gl~~sv~s~d~~~~~~~~~~l~~g~v~vN~~~~---~~~~~pfgG~~~sG~g~~~g~~ 393 (414)
|++|++|+|+||||+++|+++|||++||||+|.+.++++++++++|.|+||+... ..+.+||||+|.||+|+++|.+
T Consensus 398 vl~v~~~~~~deai~~~N~~~~gLsa~V~t~d~~~a~~~~~~l~~G~v~IN~~~~~~~~~~~~PfGG~k~SG~G~~~g~~ 477 (524)
T PRK09407 398 VVSVYPVADVDEAVERANDTPYGLNASVWTGDTARGRAIAARIRAGTVNVNEGYAAAWGSVDAPMGGMKDSGLGRRHGAE 477 (524)
T ss_pred eEEEEeeCCHHHHHHHHhCCCCCceEEEECCCHHHHHHHHHhCCcceEEECCCCCcCcCCCCCCCCCccccccCccchHH
Confidence 9999999999999999999999999999999999999999999999999998754 3457899999999999999999
Q ss_pred HHHhhhcccEEEEe
Q 015031 394 SLHNYLQVKSVVTP 407 (414)
Q Consensus 394 ~~~~~~~~k~i~~~ 407 (414)
|+++|+++|+|+.+
T Consensus 478 ~l~~ft~~k~v~~~ 491 (524)
T PRK09407 478 GLLKYTESQTIATQ 491 (524)
T ss_pred HHHHhCCeEEEEEc
Confidence 99999999999875
|
|
| >PRK03137 1-pyrroline-5-carboxylate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-84 Score=666.30 Aligned_cols=404 Identities=35% Similarity=0.573 Sum_probs=375.3
Q ss_pred CHHHHHHHHHhHHHHHHHHHHHcCCChHHHhhccHHHHHHHHHHHHHhhhhhc-CceeccccCccccccccCCcEEEEEc
Q 015031 1 MLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIH-GEVLKMSRALQGYTLREPIGVVGHII 79 (414)
Q Consensus 1 L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~~~~~~-~~~~~~~~~~~~~~~~~P~Gvv~~i~ 79 (414)
|+++++.|++++++|++++++|+|||..++ ..|+..+++.+++++..+.+.. +.......+...+++++|+|||++|+
T Consensus 101 L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a-~~ev~~~~~~~~~~a~~~~~~~~~~~~~~~~g~~~~~~~~P~GVv~~I~ 179 (514)
T PRK03137 101 LLRAAAIIRRRKHEFSAWLVKEAGKPWAEA-DADTAEAIDFLEYYARQMLKLADGKPVESRPGEHNRYFYIPLGVGVVIS 179 (514)
T ss_pred HHHHHHHHHHCHHHHHHHHHHHcCCCHHHH-HHHHHHHHHHHHHHHHHHHHhcCCccccCCCCceEEEEEecCcEEEEEC
Confidence 578999999999999999999999999976 4699999999999998876653 22222224556788999999999999
Q ss_pred CCCcChHhhHHHHHHHHhcCCeEEEecCCCChhHHHHHHHHHHHcCCCCCeEEEEcCCchhHHHHHHhCCCcCeEEEeCC
Q 015031 80 PWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGS 159 (414)
Q Consensus 80 p~n~P~~~~~~~~~~ALaaGN~vv~kps~~~~~~~~~l~~~~~~aglp~g~v~~~~~~~~~~~~~l~~~~~~~~v~~tGs 159 (414)
|||||+...++++++||++||+||+|||+.+|.++..+.+++.++|+|+|++|++++++.+.++.|+.|++++.|.||||
T Consensus 180 PwN~P~~~~~~~i~~ALaaGN~VVlKPs~~tp~~a~~l~~~l~~aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~V~fTGs 259 (514)
T PRK03137 180 PWNFPFAIMAGMTLAAIVAGNTVLLKPASDTPVIAAKFVEVLEEAGLPAGVVNFVPGSGSEVGDYLVDHPKTRFITFTGS 259 (514)
T ss_pred CCccHHHHHHHHHHHHHHcCCEEEEECCCCCcHHHHHHHHHHHHhCCCCCcEEEeecCchHHHHHHhcCCCcCEEEEECC
Confidence 99999999999999999999999999999999999999999999999999999999977788999999999999999999
Q ss_pred HHHHHHHHHHHhh-----CCCCceeeeCCCCCceeecCCCCHHHHHHHHHHHHhcccCCccccCcEEEEeCccHHHHHHH
Q 015031 160 TDVGRQVMQAAAT-----SNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKK 234 (414)
Q Consensus 160 ~~~~~~i~~~~~~-----~~~~~~~~e~gG~~~~iV~~dadl~~a~~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f~~~ 234 (414)
+.+|+.|.+.++. .+++|+++|+|||||+||++|||++.|++.+++++|.|+||.|+++++||||++++|+|+++
T Consensus 260 ~~~G~~i~~~aa~~~~~~~~l~~v~lElgGk~~~iV~~daDl~~Aa~~i~~~~~~~~GQ~C~a~~rv~V~~~v~d~f~~~ 339 (514)
T PRK03137 260 REVGLRIYERAAKVQPGQIWLKRVIAEMGGKDAIVVDEDADLDLAAESIVASAFGFSGQKCSACSRAIVHEDVYDEVLEK 339 (514)
T ss_pred cHHHHHHHHHHhcccccccccceEEecCCCCCeEEECCCCCHHHHHHHHHHHHHhCCCCCCccCeEEEEeHHHHHHHHHH
Confidence 9999999998872 16799999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhccccCCCCCCCCCccccCCHHHHHHHHHHHHHhhhcCCeEeeCCcccCCCCceeeeEEEEeCCCCCcccccccc
Q 015031 235 LVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIGKKGYYIEPTIFTNVTEDMLIAKNEIF 314 (414)
Q Consensus 235 l~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~f 314 (414)
|+++++++++|+|.++. ++||++++.+++++++++++++++ +++++||......|+|++|||+.+++++|++++||+|
T Consensus 340 l~~~~~~l~~g~p~~~~-~~Gpli~~~~~~~v~~~v~~a~~~-~~vl~Gg~~~~~~g~~~~Ptvl~~v~~~~~~~~eE~F 417 (514)
T PRK03137 340 VVELTKELTVGNPEDNA-YMGPVINQASFDKIMSYIEIGKEE-GRLVLGGEGDDSKGYFIQPTIFADVDPKARIMQEEIF 417 (514)
T ss_pred HHHHHHhCCCCCCCCcc-CcCCCCCHHHHHHHHHHHHHHHhC-CEEEeCCCcCCCCceEEeeEEEeCCCCCCHHHhCCCC
Confidence 99999999999999998 999999999999999999999887 5999999765557999999999999999999999999
Q ss_pred cceEEEeeeCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHHhccceeEEEECCcCC--CCCCCCccCCCCCCCC-Ccch
Q 015031 315 GPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSIRAGIIWINCYFA--FDSDCPYGGYKMSGFG-RDCG 391 (414)
Q Consensus 315 gPvl~v~~~~~~~eai~~~n~~~~gl~~sv~s~d~~~~~~~~~~l~~g~v~vN~~~~--~~~~~pfgG~~~sG~g-~~~g 391 (414)
|||++|++|+|++|||+++|+++|||++||||+|.+.++++++++++|+|+||+... ..+.+||||+|.||+| +.+|
T Consensus 418 gPvl~v~~~~~~~eai~~~N~~~~gL~a~v~t~d~~~a~~~~~~l~~G~v~IN~~~~~~~~~~~PfGG~k~SG~G~~~gg 497 (514)
T PRK03137 418 GPVVAFIKAKDFDHALEIANNTEYGLTGAVISNNREHLEKARREFHVGNLYFNRGCTGAIVGYHPFGGFNMSGTDSKAGG 497 (514)
T ss_pred CceEEEEecCCHHHHHHHHhCCCCCceEEEEcCCHHHHHHHHHhCCcCeEEECCCCCCCCCCCCCCCCcccccCCcccCC
Confidence 999999999999999999999999999999999999999999999999999998754 3356899999999999 6899
Q ss_pred HHHHHhhhcccEEEEe
Q 015031 392 LESLHNYLQVKSVVTP 407 (414)
Q Consensus 392 ~~~~~~~~~~k~i~~~ 407 (414)
.+++++||++|+++..
T Consensus 498 ~~~l~~ft~~k~v~~~ 513 (514)
T PRK03137 498 PDYLLLFLQAKTVSEM 513 (514)
T ss_pred HHHHHHhceEEEEEEe
Confidence 9999999999998754
|
|
| >cd07099 ALDH_DDALDH Methylomonas sp | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-84 Score=659.38 Aligned_cols=401 Identities=37% Similarity=0.594 Sum_probs=375.5
Q ss_pred CHHHHHHHHHhHHHHHHHHHHHcCCChHHHhhccHHHHHHHHHHHHHhhhhhcCce-ecc---ccCccccccccCCcEEE
Q 015031 1 MLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEV-LKM---SRALQGYTLREPIGVVG 76 (414)
Q Consensus 1 L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~~~~~~~~~-~~~---~~~~~~~~~~~P~Gvv~ 76 (414)
|+++++.|++++++|++++++|+|||..+ ...|+..+++.++++++.+.+..+.. .+. ..+...+.+++|+|||+
T Consensus 46 L~~~a~~l~~~~~~la~~~~~e~Gk~~~~-~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~ 124 (453)
T cd07099 46 LLRWKRALADHADELAELLHAETGKPRAD-AGLEVLLALEAIDWAARNAPRVLAPRKVPTGLLMPNKKATVEYRPYGVVG 124 (453)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHcCCCHHH-HHHHHHHHHHHHHHHHHHHHHhcCCccccCcccCCCceeEEEEecceEEE
Confidence 57899999999999999999999999995 56799999999999998876654332 221 13556788999999999
Q ss_pred EEcCCCcChHhhHHHHHHHHhcCCeEEEecCCCChhHHHHHHHHHHHcCCCCCeEEEEcCCchhHHHHHHhCCCcCeEEE
Q 015031 77 HIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSF 156 (414)
Q Consensus 77 ~i~p~n~P~~~~~~~~~~ALaaGN~vv~kps~~~~~~~~~l~~~~~~aglp~g~v~~~~~~~~~~~~~l~~~~~~~~v~~ 156 (414)
+|+|||||+...++++++||++||+||+|||+.+|.++..+.+++.++|+|+|+++++++++ +.+..|+.| .+|.|.|
T Consensus 125 ~I~p~N~P~~~~~~~l~~ALaaGN~vilKps~~~p~~~~~l~~~l~~ag~P~g~~~vv~g~~-~~~~~l~~~-~vd~V~f 202 (453)
T cd07099 125 VISPWNYPLLTPMGDIIPALAAGNAVVLKPSEVTPLVGELLAEAWAAAGPPQGVLQVVTGDG-ATGAALIDA-GVDKVAF 202 (453)
T ss_pred EECCCChHHHHHHHHHHHHHHcCCEEEEECCccchHHHHHHHHHHHHcCCCCCeEEEEeCCc-hHHHHHhcC-CCCEEEE
Confidence 99999999999999999999999999999999999999999999999999999999999965 678888887 4999999
Q ss_pred eCCHHHHHHHHHHHhhCCCCceeeeCCCCCceeecCCCCHHHHHHHHHHHHhcccCCccccCcEEEEeCccHHHHHHHHH
Q 015031 157 TGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLV 236 (414)
Q Consensus 157 tGs~~~~~~i~~~~~~~~~~~~~~e~gG~~~~iV~~dadl~~a~~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f~~~l~ 236 (414)
|||+++|+.|.+.++ ++++|+++|+||+||+||++|||++.|++.+++++|.|+||.|+++++||||++++|+|+++|+
T Consensus 203 tGs~~~g~~i~~~aa-~~~~~~~lelgG~~p~iV~~dadl~~a~~~i~~~~~~~~GQ~C~a~~ri~V~~~i~d~f~~~l~ 281 (453)
T cd07099 203 TGSVATGRKVMAAAA-ERLIPVVLELGGKDPMIVLADADLERAAAAAVWGAMVNAGQTCISVERVYVHESVYDEFVARLV 281 (453)
T ss_pred ECCHHHHHHHHHHHH-hcCCeEEEECCCCCeEEECCCCCHHHHHHHHHHHHHhcCCCCCCCCcEEEEcHHHHHHHHHHHH
Confidence 999999999999987 7799999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhccccCCCCCCCCCccccCCHHHHHHHHHHHHHhhhcCCeEeeCCcccCCCCceeeeEEEEeCCCCCcccccccccc
Q 015031 237 EKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIGKKGYYIEPTIFTNVTEDMLIAKNEIFGP 316 (414)
Q Consensus 237 ~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgP 316 (414)
++++++++|+|.|+++++||++++.+++++.+++++++++|+++++||.....+|+|++|||+.+++++|+++++|+|||
T Consensus 282 ~~~~~l~~G~~~~~~~~~gp~i~~~~~~~~~~~i~~a~~~ga~~~~gg~~~~~~g~~~~Ptil~~~~~~~~~~~~E~FgP 361 (453)
T cd07099 282 AKARALRPGADDIGDADIGPMTTARQLDIVRRHVDDAVAKGAKALTGGARSNGGGPFYEPTVLTDVPHDMDVMREETFGP 361 (453)
T ss_pred HHHHhccCCCCCCCCCcccCCcCHHHHHHHHHHHHHHHhCCCEEEeCCCcCCCCCeEEecEEEecCCCCCHHHhCCCcCC
Confidence 99999999999999999999999999999999999999999999999976534689999999999999999999999999
Q ss_pred eEEEeeeCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHHhccceeEEEECCcCC--CCCCCCccCCCCCCCCCcchHHH
Q 015031 317 VMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSIRAGIIWINCYFA--FDSDCPYGGYKMSGFGRDCGLES 394 (414)
Q Consensus 317 vl~v~~~~~~~eai~~~n~~~~gl~~sv~s~d~~~~~~~~~~l~~g~v~vN~~~~--~~~~~pfgG~~~sG~g~~~g~~~ 394 (414)
|++|++|+|.||||+++|++++||++||||+|.+.++++++++++|.|+||+... ..+.+||||+|.||+|+++|.++
T Consensus 362 vl~v~~~~~~~eai~~~n~~~~gL~~~i~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~~~PfGG~~~SG~g~~~g~~~ 441 (453)
T cd07099 362 VLPVMPVADEDEAIALANDSRYGLSASVFSRDLARAEAIARRLEAGAVSINDVLLTAGIPALPFGGVKDSGGGRRHGAEG 441 (453)
T ss_pred eeEEEeeCCHHHHHHHHhCCCCCCeEEEEcCCHHHHHHHHHhCCeeeEEECCCCCCCCCCCCCCCCcccccCCccChHHH
Confidence 9999999999999999999999999999999999999999999999999999854 35789999999999999999999
Q ss_pred HHhhhcccEEE
Q 015031 395 LHNYLQVKSVV 405 (414)
Q Consensus 395 ~~~~~~~k~i~ 405 (414)
+++||++|+++
T Consensus 442 ~~~~t~~k~v~ 452 (453)
T cd07099 442 LREFCRPKAIA 452 (453)
T ss_pred HHHhcceEEEe
Confidence 99999999986
|
4,4'-diapolycopene-dialdehyde dehydrogenase-like. The 4,4'-diapolycopene-dialdehyde dehydrogenase (DDALDH) involved in C30 carotenoid synthesis in Methylomonas sp. strain 16a and other similar sequences are present in this CD. DDALDH converts 4,4'-diapolycopene-dialdehyde into 4,4'-diapolycopene-diacid. |
| >cd07146 ALDH_PhpJ Streptomyces putative phosphonoformaldehyde dehydrogenase PhpJ-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-84 Score=657.01 Aligned_cols=398 Identities=36% Similarity=0.585 Sum_probs=371.7
Q ss_pred CHHHHHHHHHhHHHHHHHHHHHcCCChHHHhhccHHHHHHHHHHHHHhhhhhcCceeccc-----cCccccccccCCcEE
Q 015031 1 MLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMS-----RALQGYTLREPIGVV 75 (414)
Q Consensus 1 L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~P~Gvv 75 (414)
|+++++.|++|+++|++++++|+|||..++ ..|+..+++.+++++..+....++..+.. .+...+.+++|+|||
T Consensus 46 L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a-~~ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv 124 (451)
T cd07146 46 LNKAAALLEARREEFARLITLESGLCLKDT-RYEVGRAADVLRFAAAEALRDDGESFSCDLTANGKARKIFTLREPLGVV 124 (451)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCCHHHH-HHHHHHHHHHHHHHHHHHHHhcCcccccccccCCCCceEEEEEeccceE
Confidence 578999999999999999999999999975 57999999999999987765544322211 234467889999999
Q ss_pred EEEcCCCcChHhhHHHHHHHHhcCCeEEEecCCCChhHHHHHHHHHHHcCCCCCeEEEEcCCchhHHHHHHhCCCcCeEE
Q 015031 76 GHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVS 155 (414)
Q Consensus 76 ~~i~p~n~P~~~~~~~~~~ALaaGN~vv~kps~~~~~~~~~l~~~~~~aglp~g~v~~~~~~~~~~~~~l~~~~~~~~v~ 155 (414)
++|+|||||++..++++++||++||+||+|||+.+|.++..+.+++.++|+|+|+++++++++.+.++.|+.|+++|.|.
T Consensus 125 ~~I~P~N~P~~~~~~~~~~ALaaGN~VilKps~~~p~~~~~l~~~l~~aglP~g~v~~v~g~~~~~~~~l~~~~~i~~V~ 204 (451)
T cd07146 125 LAITPFNHPLNQVAHKIAPAIAANNRIVLKPSEKTPLSAIYLADLLYEAGLPPDMLSVVTGEPGEIGDELITHPDVDLVT 204 (451)
T ss_pred EEEccCChHHHHHHHHHHHHHHcCCEEEEECCCCchHHHHHHHHHHHHcCcCccceEEEecCchHHHHHHhcCCCCCEEE
Confidence 99999999999999999999999999999999999999999999999999999999999997778899999999999999
Q ss_pred EeCCHHHHHHHHHHHhhCCCCceeeeCCCCCceeecCCCCHHHHHHHHHHHHhcccCCccccCcEEEEeCccHHHHHHHH
Q 015031 156 FTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKL 235 (414)
Q Consensus 156 ~tGs~~~~~~i~~~~~~~~~~~~~~e~gG~~~~iV~~dadl~~a~~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f~~~l 235 (414)
||||+.+|+.|.+.++ .+|+++|+|||||+||++|||++.|++.+++++|.|+||.|+++++||||++++|+|+++|
T Consensus 205 fTGs~~~g~~i~~~a~---~~~~~lElGG~~p~iV~~daDl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~d~f~~~l 281 (451)
T cd07146 205 FTGGVAVGKAIAATAG---YKRQLLELGGNDPLIVMDDADLERAATLAVAGSYANSGQRCTAVKRILVHESVADEFVDLL 281 (451)
T ss_pred EECCHHHHHHHHHHhc---CCceeeecCCCceEEECCCCCHHHHHHHHHHHHHhhCCCCCCCCceEEEchHHHHHHHHHH
Confidence 9999999999988764 6799999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhccccCCCCCCCCCccccCCHHHHHHHHHHHHHhhhcCCeEeeCCcccCCCCceeeeEEEEeCCCCCccccccccc
Q 015031 236 VEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIGKKGYYIEPTIFTNVTEDMLIAKNEIFG 315 (414)
Q Consensus 236 ~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fg 315 (414)
+++++++++|+|.|+++++||++++.+++++++++++++++|+++++||.. .|+|++|||+.+++++|++++||+||
T Consensus 282 ~~~~~~l~~g~p~~~~~~~gpli~~~~~~~v~~~v~~a~~~Ga~vl~gg~~---~g~~~~Ptvl~~~~~~~~~~~eE~Fg 358 (451)
T cd07146 282 VEKSAALVVGDPMDPATDMGTVIDEEAAIQIENRVEEAIAQGARVLLGNQR---QGALYAPTVLDHVPPDAELVTEETFG 358 (451)
T ss_pred HHHHhcCCCCCCCCCCCCcCCCCCHHHHHHHHHHHHHHHhCCCEEEeCCCc---CCEEEcCEEeecCCCCCHHHhCCCCC
Confidence 999999999999999999999999999999999999999999999999964 58999999999999999999999999
Q ss_pred ceEEEeeeCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHHhccceeEEEECCcCCC-CCCCCccCCCCCCC-CCcchHH
Q 015031 316 PVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSIRAGIIWINCYFAF-DSDCPYGGYKMSGF-GRDCGLE 393 (414)
Q Consensus 316 Pvl~v~~~~~~~eai~~~n~~~~gl~~sv~s~d~~~~~~~~~~l~~g~v~vN~~~~~-~~~~pfgG~~~sG~-g~~~g~~ 393 (414)
||++|++|+|+||||+++|+++|||++||||+|.+.++++++++++|+|+||+.+.. .+.+||||+|.||+ |+++|++
T Consensus 359 Pvl~v~~~~~~~eai~~~n~~~~gL~~~i~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~~PfGG~k~SG~~g~~~g~~ 438 (451)
T cd07146 359 PVAPVIRVKDLDEAIAISNSTAYGLSSGVCTNDLDTIKRLVERLDVGTVNVNEVPGFRSELSPFGGVKDSGLGGKEGVRE 438 (451)
T ss_pred CeEEEEEeCCHHHHHHHHhCCCCCceEEEECCCHHHHHHHHHHCCcceEEECCCCCCCCCCCCcCcccccCCCcccChHH
Confidence 999999999999999999999999999999999999999999999999999986543 46789999999995 8999999
Q ss_pred HHHhhhcccEEE
Q 015031 394 SLHNYLQVKSVV 405 (414)
Q Consensus 394 ~~~~~~~~k~i~ 405 (414)
|+++||++|+++
T Consensus 439 ~~~~f~~~k~~~ 450 (451)
T cd07146 439 AMKEMTNVKTYS 450 (451)
T ss_pred HHHHHhceeEEe
Confidence 999999999875
|
Putative phosphonoformaldehyde dehydrogenase (PhpJ), an aldehyde dehydrogenase homolog reportedly involved in the biosynthesis of phosphinothricin tripeptides in Streptomyces viridochromogenes DSM 40736, and similar sequences are included in this CD. |
| >cd07111 ALDH_F16 Aldehyde dehydrogenase family 16A1-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-84 Score=659.10 Aligned_cols=391 Identities=45% Similarity=0.747 Sum_probs=369.8
Q ss_pred CHHHHHHHHHhHHHHHHHHHHHcCCChHHHhhccHHHHHHHHHHHHHhhhhhcCceeccccCccccccccCCcEEEEEcC
Q 015031 1 MLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMSRALQGYTLREPIGVVGHIIP 80 (414)
Q Consensus 1 L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p 80 (414)
|+++++.|++++++|++++++|+|||..++...|+..+++.+++++.+++... .....++|+|||++|+|
T Consensus 87 L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a~~~ev~~~~~~~~~~~~~~~~~~----------~~~~~~~P~GVV~~I~P 156 (480)
T cd07111 87 LYRIARHIQKHQRLFAVLESLDNGKPIRESRDCDIPLVARHFYHHAGWAQLLD----------TELAGWKPVGVVGQIVP 156 (480)
T ss_pred HHHHHHHHHHhHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhc----------CCcccceecceEEEECC
Confidence 57899999999999999999999999997655699999999998887765432 12346899999999999
Q ss_pred CCcChHhhHHHHHHHHhcCCeEEEecCCCChhHHHHHHHHHHHcCCCCCeEEEEcCCchhHHHHHHhCCCcCeEEEeCCH
Q 015031 81 WNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGST 160 (414)
Q Consensus 81 ~n~P~~~~~~~~~~ALaaGN~vv~kps~~~~~~~~~l~~~~~~aglp~g~v~~~~~~~~~~~~~l~~~~~~~~v~~tGs~ 160 (414)
||||+...++++++||++||+||+|||+.+|.++..+.+++.++|+|+|++|++++++ +.+..|+.|+.+|.|.||||+
T Consensus 157 wN~P~~~~~~~i~~ALaaGN~VVlKps~~tp~~~~~l~~~~~~aGlP~gvv~~v~g~~-~~~~~l~~~~~v~~v~ftGs~ 235 (480)
T cd07111 157 WNFPLLMLAWKICPALAMGNTVVLKPAEYTPLTALLFAEICAEAGLPPGVLNIVTGNG-SFGSALANHPGVDKVAFTGST 235 (480)
T ss_pred CccHHHHHHHHHHHHHHcCCEEEEECCCCChHHHHHHHHHHHhcCCCcccEEEEeCCc-hHHHHHhcCCCcCEEEEECCH
Confidence 9999999999999999999999999999999999999999999999999999999855 678999999999999999999
Q ss_pred HHHHHHHHHHhhCCCCceeeeCCCCCceeecCCCCHHHHHHHHHHHHhcccCCccccCcEEEEeCccHHHHHHHHHHHHh
Q 015031 161 DVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAK 240 (414)
Q Consensus 161 ~~~~~i~~~~~~~~~~~~~~e~gG~~~~iV~~dadl~~a~~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f~~~l~~~~~ 240 (414)
.+|+.|.+.++ +.++|+++|+|||||+||++|+|++.|++.+++++|.|+||.|+++++||||++++|+|+++|+++++
T Consensus 236 ~~g~~v~~~aa-~~~~~~~lElGGk~p~iV~~daDl~~aa~~i~~~~f~~~GQ~C~a~~ri~V~~~i~d~f~~~l~~~~~ 314 (480)
T cd07111 236 EVGRALRRATA-GTGKKLSLELGGKSPFIVFDDADLDSAVEGIVDAIWFNQGQVCCAGSRLLVQESVAEELIRKLKERMS 314 (480)
T ss_pred HHHHHHHHHHh-ccCCcEEEEcCCCceEEECCCCCHHHHHHHHHHHHHhcCCCcCcCCceEEEcHHHHHHHHHHHHHHHH
Confidence 99999999987 78999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccCCCCCCCCCccccCCHHHHHHHHHHHHHhhhcCCeEeeCCcccCCCCceeeeEEEEeCCCCCcccccccccceEEE
Q 015031 241 AWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIGKKGYYIEPTIFTNVTEDMLIAKNEIFGPVMAL 320 (414)
Q Consensus 241 ~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v 320 (414)
++++|+|.++++++||++++.+++++.+++++++.+|+++++||....+.|+|++|||+.+++++|++++||+||||++|
T Consensus 315 ~~~vg~p~~~~~~~gpli~~~~~~~v~~~i~~a~~~ga~~~~gg~~~~~~g~~~~Ptvl~~~~~~~~i~~eE~FgPvl~v 394 (480)
T cd07111 315 HLRVGDPLDKAIDMGAIVDPAQLKRIRELVEEGRAEGADVFQPGADLPSKGPFYPPTLFTNVPPASRIAQEEIFGPVLVV 394 (480)
T ss_pred hcCCCCCCCCCCccccccCHHHHHHHHHHHHHHHHCCCEEEeCCCcCCCCCeEEeeEEEecCCCCChhhcCCCCCCeeEe
Confidence 99999999999999999999999999999999999999999998754457899999999999999999999999999999
Q ss_pred eeeCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHHhccceeEEEECCcCCCCCCCCccCCCCCCCCCcchHHHHHhhhc
Q 015031 321 MKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSIRAGIIWINCYFAFDSDCPYGGYKMSGFGRDCGLESLHNYLQ 400 (414)
Q Consensus 321 ~~~~~~~eai~~~n~~~~gl~~sv~s~d~~~~~~~~~~l~~g~v~vN~~~~~~~~~pfgG~~~sG~g~~~g~~~~~~~~~ 400 (414)
++|+|.||||+++|++++||+++|||+|.+.+.++++++++|+|+||+.....+.+||||+|.||+|+++|.+|+++||+
T Consensus 395 ~~~~~~deai~~~n~~~~gL~~~i~t~d~~~~~~~~~~l~aG~v~iN~~~~~~~~~PfGG~k~SG~G~~~g~~~~~~~~~ 474 (480)
T cd07111 395 LTFRTAKEAVALANNTPYGLAASVWSENLSLALEVALSLKAGVVWINGHNLFDAAAGFGGYRESGFGREGGKEGLYEYLR 474 (480)
T ss_pred ecCCCHHHHHHHHhCCCCCceEEEEcCCHHHHHHHHHhCCEeeEEECCCCCCCCCCCcCCcccccCCccchHHHHHHHhh
Confidence 99999999999999999999999999999999999999999999999987777789999999999999999999999999
Q ss_pred ccE
Q 015031 401 VKS 403 (414)
Q Consensus 401 ~k~ 403 (414)
+|+
T Consensus 475 ~k~ 477 (480)
T cd07111 475 PSW 477 (480)
T ss_pred ccC
Confidence 885
|
Uncharacterized aldehyde dehydrogenase family 16 member A1 (ALDH16A1) and other related sequences are present in this CD. The active site cysteine and glutamate residues are not conserved in the human ALDH16A1 protein sequence. |
| >cd07108 ALDH_MGR_2402 Magnetospirillum NAD(P)+-dependent aldehyde dehydrogenase MSR-1-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-84 Score=658.62 Aligned_cols=402 Identities=42% Similarity=0.735 Sum_probs=375.7
Q ss_pred CHHHHHHHHHhHHHHHHHHHHHcCCCh-HHHhhccHHHHHHHHHHHHHhhhhhcCceeccccCccccccccCCcEEEEEc
Q 015031 1 MLKFADLIEEHAEVLAVLEALDAGKLH-SWAKMGDIPGAANTLRYYAGAADKIHGEVLKMSRALQGYTLREPIGVVGHII 79 (414)
Q Consensus 1 L~~~a~~l~~~~~~l~~~~~~e~Gk~~-~~~~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~ 79 (414)
|+++++.|++++++|++++++|+||+. .++ ..|+..+++.+++++.......+...+...+...+..++|+|||++|+
T Consensus 47 L~~~a~~l~~~~~ela~~~~~e~Gk~~~~~a-~~ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~ 125 (457)
T cd07108 47 LARIADALEARSEELARLLALETGNALRTQA-RPEAAVLADLFRYFGGLAGELKGETLPFGPDVLTYTVREPLGVVGAIL 125 (457)
T ss_pred HHHHHHHHHHhHHHHHHHHHHhcCCCcHHHH-HHHHHHHHHHHHHHHHHHHHhCCceeccCCCeeEEEEeecceEEEEEC
Confidence 578999999999999999999999997 554 579999999999999877665555443333445678899999999999
Q ss_pred CCCcChHhhHHHHHHHHhcCCeEEEecCCCChhHHHHHHHHHHHcCCCCCeEEEEcCCchhHHHHHHhCCCcCeEEEeCC
Q 015031 80 PWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGS 159 (414)
Q Consensus 80 p~n~P~~~~~~~~~~ALaaGN~vv~kps~~~~~~~~~l~~~~~~aglp~g~v~~~~~~~~~~~~~l~~~~~~~~v~~tGs 159 (414)
|||||+...++++++||++||+||+|||+.+|.++..+.+++.++ +|+|+++++++++.+.++.|+.|+++|.|.||||
T Consensus 126 p~N~P~~~~~~~~~~ALaaGN~VVlKps~~~p~~~~~l~~~~~~~-lP~~~~~~v~g~~~~~~~~L~~~~~vd~v~ftGs 204 (457)
T cd07108 126 PWNAPLMLAALKIAPALVAGNTVVLKAAEDAPLAVLLLAEILAQV-LPAGVLNVITGYGEECGAALVDHPDVDKVTFTGS 204 (457)
T ss_pred CCchHHHHHHHHHHHHHHcCCEEEEECCCCCcHHHHHHHHHHHHh-CCcCcEEEEeCCchHHHHHHhcCCCcCEEEEECc
Confidence 999999999999999999999999999999999999999999987 9999999999977788899999999999999999
Q ss_pred HHHHHHHHHHHhhCCCCceeeeCCCCCceeecCCCCHHHHHHHHHHH-HhcccCCccccCcEEEEeCccHHHHHHHHHHH
Q 015031 160 TDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLG-ILFNKGEICVASSRVYVQEGIYDEFEKKLVEK 238 (414)
Q Consensus 160 ~~~~~~i~~~~~~~~~~~~~~e~gG~~~~iV~~dadl~~a~~~i~~~-~~~~~Gq~C~a~~~v~V~~~~~~~f~~~l~~~ 238 (414)
+.+|+.|.+.++ ++++|+++|+||+||+||++|||++.|++.++++ +|.|+||.|+++++||||++++|+|+++|+++
T Consensus 205 ~~~g~~v~~~aa-~~l~~~~lelgG~~~~iV~~dAdl~~Aa~~iv~~~~f~~~GQ~C~a~~rv~V~~~i~~~f~~~l~~~ 283 (457)
T cd07108 205 TEVGKIIYRAAA-DRLIPVSLELGGKSPMIVFPDADLDDAVDGAIAGMRFTRQGQSCTAGSRLFVHEDIYDAFLEKLVAK 283 (457)
T ss_pred HHHHHHHHHHHh-ccCCeEEEECCCCCeeEECCCCCHHHHHHHHHHhhHhhcCCCCCCCCeEEEEehHHHHHHHHHHHHH
Confidence 999999999987 7889999999999999999999999999999999 59999999999999999999999999999999
Q ss_pred HhccccCCCCCCCCCccccCCHHHHHHHHHHHHHhhh-cCCeEeeCCcccC----CCCceeeeEEEEeCCCCCccccccc
Q 015031 239 AKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKR-EGATLLTGGKPIG----KKGYYIEPTIFTNVTEDMLIAKNEI 313 (414)
Q Consensus 239 ~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~-~ga~v~~gg~~~~----~~g~~~~Ptvl~~~~~~~~~~~~E~ 313 (414)
++++++|+|.++++++||++++.++++++++++++++ +|+++++||.... ..|+|++|||+.+++++|++++||+
T Consensus 284 ~~~~~vg~p~~~~~~~gpli~~~~~~~~~~~i~~a~~~~ga~vl~gG~~~~~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~ 363 (457)
T cd07108 284 LSKLKIGDPLDEATDIGAIISEKQFAKVCGYIDLGLSTSGATVLRGGPLPGEGPLADGFFVQPTIFSGVDNEWRLAREEI 363 (457)
T ss_pred HhhCCCCCCCCCCCCcCCCCCHHHHHHHHHHHHHHHhCCCCEEEeCCCcCccCCCCCceEECCEEEecCCCCChhhhcCC
Confidence 9999999999999999999999999999999999998 9999999997642 3689999999999999999999999
Q ss_pred ccceEEEeeeCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHHhccceeEEEECCcCCCCCCCCccCCCCCCCCCcchHH
Q 015031 314 FGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSIRAGIIWINCYFAFDSDCPYGGYKMSGFGRDCGLE 393 (414)
Q Consensus 314 fgPvl~v~~~~~~~eai~~~n~~~~gl~~sv~s~d~~~~~~~~~~l~~g~v~vN~~~~~~~~~pfgG~~~sG~g~~~g~~ 393 (414)
||||++|++|+|+||||+++|+++|||++||||+|.+.++++++++++|.|+||++....+.+||||+|.||+|+++|.+
T Consensus 364 FgPvl~v~~~~~~~eai~~~n~~~~gLs~~vft~d~~~a~~~~~~l~~g~v~iN~~~~~~~~~pfGG~k~SG~G~~~g~~ 443 (457)
T cd07108 364 FGPVLCAIPWKDEDEVIAMANDSHYGLAAYVWTRDLGRALRAAHALEAGWVQVNQGGGQQPGQSYGGFKQSGLGREASLE 443 (457)
T ss_pred CCceEEeecCCCHHHHHHHHhCCCcCceeEEEcCCHHHHHHHHHhcCcceEEECCCCCCCCCCCcCCcccCcCCCCccch
Confidence 99999999999999999999999999999999999999999999999999999998776778999999999999999987
Q ss_pred H-HHhhhcccEEE
Q 015031 394 S-LHNYLQVKSVV 405 (414)
Q Consensus 394 ~-~~~~~~~k~i~ 405 (414)
+ +++||++|+++
T Consensus 444 ~~~~~f~~~k~i~ 456 (457)
T cd07108 444 GMLEHFTQKKTVN 456 (457)
T ss_pred hHHHHhhceEEEe
Confidence 6 69999999875
|
NAD(P)+-dependent aldehyde dehydrogenase of Magnetospirillum gryphiswaldense MSR-1 (MGR_2402) , and other similar sequences, are present in this CD. |
| >cd07104 ALDH_BenzADH-like ALDH subfamily: NAD(P)+-dependent benzaldehyde dehydrogenase II, vanillin dehydrogenase, p-hydroxybenzaldehyde dehydrogenase and related proteins | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-84 Score=654.31 Aligned_cols=400 Identities=40% Similarity=0.667 Sum_probs=376.6
Q ss_pred CHHHHHHHHHhHHHHHHHHHHHcCCChHHHhhccHHHHHHHHHHHHHhhhhhcCceeccc-cCccccccccCCcEEEEEc
Q 015031 1 MLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMS-RALQGYTLREPIGVVGHII 79 (414)
Q Consensus 1 L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~-~~~~~~~~~~P~Gvv~~i~ 79 (414)
|+++++.|++|+++|+++++.|+||+..++ ..|+..+++.+++++....+..+...+.. .+...+.+++|+|||++|+
T Consensus 28 L~~~a~~l~~~~~ela~~~~~e~Gk~~~~~-~~ei~~~~~~l~~~~~~~~~~~~~~~~~~~~g~~~~~~~~P~GVv~~i~ 106 (431)
T cd07104 28 LRKAAEILEERRDEIADWLIRESGSTRPKA-AFEVGAAIAILREAAGLPRRPEGEILPSDVPGKESMVRRVPLGVVGVIS 106 (431)
T ss_pred HHHHHHHHHHhHHHHHHHHHHHcCCCHHHH-HHHHHHHHHHHHHHHHHHHHhcCccccCCCCCceeEEEEeeeeeEEEEC
Confidence 578999999999999999999999999875 56999999999999988766544433332 4556788999999999999
Q ss_pred CCCcChHhhHHHHHHHHhcCCeEEEecCCCChhH-HHHHHHHHHHcCCCCCeEEEEcCCchhHHHHHHhCCCcCeEEEeC
Q 015031 80 PWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLI-ALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTG 158 (414)
Q Consensus 80 p~n~P~~~~~~~~~~ALaaGN~vv~kps~~~~~~-~~~l~~~~~~aglp~g~v~~~~~~~~~~~~~l~~~~~~~~v~~tG 158 (414)
|||||+...++++++||++||+||+|||+.+|.+ +..+.+++.++|+|+|++|++++++.+.+..|+.|+++|.|.|||
T Consensus 107 p~N~P~~~~~~~~~~ALaaGN~Vi~Kps~~~p~~~~~~l~~~l~~aGlP~gvv~~v~g~~~~~~~~L~~~~~i~~V~ftG 186 (431)
T cd07104 107 PFNFPLILAMRSVAPALALGNAVVLKPDSRTPVTGGLLIAEIFEEAGLPKGVLNVVPGGGSEIGDALVEHPRVRMISFTG 186 (431)
T ss_pred CCCcHHHHHHHHHHHHHHcCCeEEeeCCCCChHHHHHHHHHHHHHcCCCcccEEEeeCCchhHHHHHhcCCCCCEEEEEC
Confidence 9999999999999999999999999999999988 578999999999999999999997777899999999999999999
Q ss_pred CHHHHHHHHHHHhhCCCCceeeeCCCCCceeecCCCCHHHHHHHHHHHHhcccCCccccCcEEEEeCccHHHHHHHHHHH
Q 015031 159 STDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEK 238 (414)
Q Consensus 159 s~~~~~~i~~~~~~~~~~~~~~e~gG~~~~iV~~dadl~~a~~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f~~~l~~~ 238 (414)
|+.+++.|.+.++ ++++|+++|+||+||+||++|||++.|++.+++++|.|+||.|+++++||||++++|+|+++|+++
T Consensus 187 s~~~g~~v~~~aa-~~~~~~~lelgG~~~~iV~~dadl~~aa~~i~~~~~~~~GQ~C~a~~~v~v~~~i~~~f~~~l~~~ 265 (431)
T cd07104 187 STAVGRHIGELAG-RHLKKVALELGGNNPLIVLDDADLDLAVSAAAFGAFLHQGQICMAAGRILVHESVYDEFVEKLVAK 265 (431)
T ss_pred CHHHHHHHHHHHh-hcCCcEEEEcCCCCeEEECCCCCHHHHHHHHHHHHHhcCCCCcccCcEEEEcHHHHHHHHHHHHHH
Confidence 9999999999988 789999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhccccCCCCCCCCCccccCCHHHHHHHHHHHHHhhhcCCeEeeCCcccCCCCceeeeEEEEeCCCCCcccccccccceE
Q 015031 239 AKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIGKKGYYIEPTIFTNVTEDMLIAKNEIFGPVM 318 (414)
Q Consensus 239 ~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl 318 (414)
++++++|+|.++++++||++++.+++++.+++++++.+|+++++||.. +|+|++|||+.+++++|++++||+||||+
T Consensus 266 ~~~~~~g~~~~~~~~~gp~i~~~~~~~i~~~i~~a~~~G~~~~~gg~~---~g~~~~Ptvl~~~~~~~~~~~eE~fgPvl 342 (431)
T cd07104 266 AKALPVGDPRDPDTVIGPLINERQVDRVHAIVEDAVAAGARLLTGGTY---EGLFYQPTVLSDVTPDMPIFREEIFGPVA 342 (431)
T ss_pred HHhcCcCCCCCCCCccCcccCHHHHHHHHHHHHHHHHCCCEEEeCCCC---CCceECCEEeecCCCCChhhhCcCcCCeE
Confidence 999999999999999999999999999999999999999999999864 58999999999999999999999999999
Q ss_pred EEeeeCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHHhccceeEEEECCcCCCC-CCCCccCCCCCCCCCcchHHHHHh
Q 015031 319 ALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSIRAGIIWINCYFAFD-SDCPYGGYKMSGFGRDCGLESLHN 397 (414)
Q Consensus 319 ~v~~~~~~~eai~~~n~~~~gl~~sv~s~d~~~~~~~~~~l~~g~v~vN~~~~~~-~~~pfgG~~~sG~g~~~g~~~~~~ 397 (414)
+|++|+|.||||+++|++++||+++|||+|.+.++++++++++|+|+||+++... +.+||||+|.||+|+++|++|+++
T Consensus 343 ~v~~~~~~~eai~~~n~~~~gl~~~i~t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~~pfgG~~~SG~g~~~g~~~l~~ 422 (431)
T cd07104 343 PVIPFDDDEEAVELANDTEYGLSAAVFTRDLERAMAFAERLETGMVHINDQTVNDEPHVPFGGVKASGGGRFGGPASLEE 422 (431)
T ss_pred EEEEECCHHHHHHHHhCCCCCceEEEEcCCHHHHHHHHHhcCcCeEEECCCCCCCCCCCCCCCcccccCCccchHHHHHH
Confidence 9999999999999999999999999999999999999999999999999987643 689999999999999999999999
Q ss_pred hhcccEEE
Q 015031 398 YLQVKSVV 405 (414)
Q Consensus 398 ~~~~k~i~ 405 (414)
|++.|+++
T Consensus 423 ~~~~k~~~ 430 (431)
T cd07104 423 FTEWQWIT 430 (431)
T ss_pred hhceeEEe
Confidence 99999975
|
ALDH subfamily which includes the NAD(P)+-dependent, benzaldehyde dehydrogenase II (XylC, BenzADH, EC=1.2.1.28) involved in the oxidation of benzyl alcohol to benzoate; p-hydroxybenzaldehyde dehydrogenase (PchA, HBenzADH) which catalyzes the oxidation of p-hydroxybenzaldehyde to p-hydroxybenzoic acid; vanillin dehydrogenase (Vdh, VaniDH) involved in the metabolism of ferulic acid as seen in Pseudomonas putida KT2440; and other related sequences. |
| >PTZ00381 aldehyde dehydrogenase family protein; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-84 Score=658.13 Aligned_cols=399 Identities=27% Similarity=0.431 Sum_probs=366.9
Q ss_pred CHHHHHHHHHhHHHHHHHHHHHcCCChHHHhhccHHHHHHHHHHHHHhhhhhcCce-ecc---ccCccccccccCCcEEE
Q 015031 1 MLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEV-LKM---SRALQGYTLREPIGVVG 76 (414)
Q Consensus 1 L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~~~~~~~~~-~~~---~~~~~~~~~~~P~Gvv~ 76 (414)
|+++++.|++|+++|++++++|+||+..|+...|+..+++.++++++..++..... ... ......+++++|+|||+
T Consensus 35 L~~l~~~l~~~~~~i~~a~~~d~Gk~~~ea~~~Ev~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~PlGVV~ 114 (493)
T PTZ00381 35 LRNLLRMLEENKQEFSEAVHKDLGRHPFETKMTEVLLTVAEIEHLLKHLDEYLKPEKVDTVGVFGPGKSYIIPEPLGVVL 114 (493)
T ss_pred HHHHHHHHHHhHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhCCcccCCccccCCCceEEEEecCcEEE
Confidence 57899999999999999999999999998766799999999999887765543221 111 12345788999999999
Q ss_pred EEcCCCcChHhhHHHHHHHHhcCCeEEEecCCCChhHHHHHHHHHHHcCCCCCeEEEEcCCchhHHHHHHhCCCcCeEEE
Q 015031 77 HIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSF 156 (414)
Q Consensus 77 ~i~p~n~P~~~~~~~~~~ALaaGN~vv~kps~~~~~~~~~l~~~~~~aglp~g~v~~~~~~~~~~~~~l~~~~~~~~v~~ 156 (414)
+|+|||||+...++++++||++||+||+|||+.+|.++..+.+++.++ +|+|++++++| +.+.+..|+.|+ +|+|.|
T Consensus 115 iI~PwN~Pl~l~~~~l~~ALaaGN~VIlKPse~tp~t~~~l~~ll~~~-lp~~~v~vv~g-~~~~~~~l~~~~-~d~i~F 191 (493)
T PTZ00381 115 VIGAWNYPLNLTLIPLAGAIAAGNTVVLKPSELSPHTSKLMAKLLTKY-LDPSYVRVIEG-GVEVTTELLKEP-FDHIFF 191 (493)
T ss_pred EECCCchHHHHHHHHHHHHHHcCCEEEEECCccCHHHHHHHHHHHHHh-CCcCEEEEecC-CHHHHHHHHhCC-CCEEEE
Confidence 999999999999999999999999999999999999999999999996 99999999998 667888899887 999999
Q ss_pred eCCHHHHHHHHHHHhhCCCCceeeeCCCCCceeecCCCCHHHHHHHHHHHHhcccCCccccCcEEEEeCccHHHHHHHHH
Q 015031 157 TGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLV 236 (414)
Q Consensus 157 tGs~~~~~~i~~~~~~~~~~~~~~e~gG~~~~iV~~dadl~~a~~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f~~~l~ 236 (414)
|||+.+|+.|++.++ ++++|+++|+|||||+||++|||++.|++.+++++|.|+||.|++++++|||++++|+|+++|+
T Consensus 192 TGS~~vG~~V~~~aa-~~l~pv~lElGGk~p~iV~~dAdl~~Aa~~i~~g~~~naGQ~C~A~~~vlV~~~i~d~f~~~l~ 270 (493)
T PTZ00381 192 TGSPRVGKLVMQAAA-ENLTPCTLELGGKSPVIVDKSCNLKVAARRIAWGKFLNAGQTCVAPDYVLVHRSIKDKFIEALK 270 (493)
T ss_pred ECCHHHHHHHHHHHH-hcCCcEEEEcCCCCceEEcCCCCHHHHHHHHHHHHHhhcCCcCCCCCEEEEeHHHHHHHHHHHH
Confidence 999999999999987 8899999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhccccCCCCCCCCCccccCCHHHHHHHHHHHHHhhhcCCeEeeCCcccCCCCceeeeEEEEeCCCCCcccccccccc
Q 015031 237 EKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIGKKGYYIEPTIFTNVTEDMLIAKNEIFGP 316 (414)
Q Consensus 237 ~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgP 316 (414)
+.++++. |++.++++++||+++..+++++.+++++ +|+++++||..+ ..++|++|||+.+++++|++++||+|||
T Consensus 271 ~~~~~~~-g~~~~~~~~~gpli~~~~~~ri~~~i~~---~ga~~~~gG~~~-~~~~~i~Ptvl~~v~~~~~i~~eEiFGP 345 (493)
T PTZ00381 271 EAIKEFF-GEDPKKSEDYSRIVNEFHTKRLAELIKD---HGGKVVYGGEVD-IENKYVAPTIIVNPDLDSPLMQEEIFGP 345 (493)
T ss_pred HHHHHHh-CCCCccCCCcCCCCCHHHHHHHHHHHHh---CCCcEEECCCcC-CCCCeEeeEEEecCCCCChHHhccccCC
Confidence 9999986 6666788999999999999999999963 588999999763 3688999999999999999999999999
Q ss_pred eEEEeeeCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHHhccceeEEEECCcCC--CCCCCCccCCCCCCCCCcchHHH
Q 015031 317 VMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSIRAGIIWINCYFA--FDSDCPYGGYKMSGFGRDCGLES 394 (414)
Q Consensus 317 vl~v~~~~~~~eai~~~n~~~~gl~~sv~s~d~~~~~~~~~~l~~g~v~vN~~~~--~~~~~pfgG~~~sG~g~~~g~~~ 394 (414)
|++|++|+|+||||+++|++++||++||||+|.+.++++++++++|.|+||+... ..+.+||||+|.||+|+++|.+|
T Consensus 346 Vl~v~~~~~~deAi~~~n~~~~gLa~~vft~d~~~~~~~~~~~~sG~v~IN~~~~~~~~~~~PFGG~g~SG~G~~~G~~g 425 (493)
T PTZ00381 346 ILPILTYENIDEVLEFINSRPKPLALYYFGEDKRHKELVLENTSSGAVVINDCVFHLLNPNLPFGGVGNSGMGAYHGKYG 425 (493)
T ss_pred eEEEEeeCCHHHHHHHHhcCCCCceEEEECCCHHHHHHHHHhCCcceEEECCccccccCCCCCCCCcCcccccccchHHH
Confidence 9999999999999999999999999999999999999999999999999998754 45789999999999999999999
Q ss_pred HHhhhcccEEEEeC
Q 015031 395 LHNYLQVKSVVTPI 408 (414)
Q Consensus 395 ~~~~~~~k~i~~~~ 408 (414)
+++||++|+|+.+.
T Consensus 426 ~~~fs~~k~v~~~~ 439 (493)
T PTZ00381 426 FDTFSHPKPVLNKS 439 (493)
T ss_pred HHhccceeEEEEcc
Confidence 99999999998763
|
|
| >PLN02203 aldehyde dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.4e-84 Score=654.94 Aligned_cols=401 Identities=27% Similarity=0.404 Sum_probs=370.4
Q ss_pred CHHHHHHHHHhHHHHHHHHHHHcCCChHHHhhccHHHHHHHHHHHHHhhhhhcCc---eecc-ccCccccccccCCcEEE
Q 015031 1 MLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGE---VLKM-SRALQGYTLREPIGVVG 76 (414)
Q Consensus 1 L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~~~~~~~~---~~~~-~~~~~~~~~~~P~Gvv~ 76 (414)
|++++++|++|+++|++++++|+|||..++...|+..+++.++++++..++..+. ..+. ..+...++.++|+|||+
T Consensus 34 L~~~a~~l~~~~~~la~~~~~e~Gk~~~ea~~~Ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~reP~GVv~ 113 (484)
T PLN02203 34 LKGLLRLLKDNEEAIFKALHQDLGKHRVEAYRDEVGVLTKSANLALSNLKKWMAPKKAKLPLVAFPATAEVVPEPLGVVL 113 (484)
T ss_pred HHHHHHHHHHhHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccCCcccCCceeEEEEecccEEE
Confidence 6899999999999999999999999999765579999999999999877665432 1111 12345688999999999
Q ss_pred EEcCCCcChHhhHHHHHHHHhcCCeEEEecCCCChhHHHHHHHHHHHcCCCCCeEEEEcCCchhHHHHHHhCCCcCeEEE
Q 015031 77 HIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSF 156 (414)
Q Consensus 77 ~i~p~n~P~~~~~~~~~~ALaaGN~vv~kps~~~~~~~~~l~~~~~~aglp~g~v~~~~~~~~~~~~~l~~~~~~~~v~~ 156 (414)
+|+|||||+...++++++||++||+||+|||+.+|.++..+.+++.++ +|+|++|+++| +.+++..|..|+ +|.|.|
T Consensus 114 ~I~pwN~P~~~~~~~i~~ALaaGN~VVlKps~~tp~~~~~l~~~~~~~-lP~gvv~vv~g-~~~~~~~l~~~~-vd~v~f 190 (484)
T PLN02203 114 IFSSWNFPIGLSLEPLIGAIAAGNAVVLKPSELAPATSAFLAANIPKY-LDSKAVKVIEG-GPAVGEQLLQHK-WDKIFF 190 (484)
T ss_pred EEcCCcchHHHHHHHHHHHHHcCCEEEEECCCcChHHHHHHHHHHHHh-CCcCEEEEEeC-CHHHHHHHHhCC-CCEEEE
Confidence 999999999999999999999999999999999999999999999996 99999999998 778899999995 999999
Q ss_pred eCCHHHHHHHHHHHhhCCCCceeeeCCCCCceeecC---CCCHHHHHHHHHHHHhc-ccCCccccCcEEEEeCccHHHHH
Q 015031 157 TGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIFD---DVDVNTAADMALLGILF-NKGEICVASSRVYVQEGIYDEFE 232 (414)
Q Consensus 157 tGs~~~~~~i~~~~~~~~~~~~~~e~gG~~~~iV~~---dadl~~a~~~i~~~~~~-~~Gq~C~a~~~v~V~~~~~~~f~ 232 (414)
|||+.+|+.|.+.++ ++++|+++|+|||||+||++ |||++.|++.+++++|. |+||.|++++|+|||++++|+|+
T Consensus 191 TGS~~~G~~v~~~aa-~~l~~v~lElGGknp~iV~~d~~daDl~~aa~~i~~~~f~~~aGQ~C~a~~rv~V~~~i~d~f~ 269 (484)
T PLN02203 191 TGSPRVGRIIMTAAA-KHLTPVALELGGKCPCIVDSLSSSRDTKVAVNRIVGGKWGSCAGQACIAIDYVLVEERFAPILI 269 (484)
T ss_pred ECCHHHHHHHHHHHH-hcCCCEEEEecCCCeEEEccCCCCCCHHHHHHHHHHHhcccCCCCccccCCeEEEcHHHHHHHH
Confidence 999999999999987 88999999999999999997 69999999999999995 89999999999999999999999
Q ss_pred HHHHHHHhccccCCCCCCCCCccccCCHHHHHHHHHHHHHhhhcCCeEeeCCcccCCCCceeeeEEEEeCCCCCcccccc
Q 015031 233 KKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIGKKGYYIEPTIFTNVTEDMLIAKNE 312 (414)
Q Consensus 233 ~~l~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E 312 (414)
++|++++.++++|+|.++ +++||++++.+++++++++++++.+ +++++||... ++|+|++|||+.+++++|++++||
T Consensus 270 ~~L~~~~~~~~~G~p~~~-~~~Gpli~~~~~~~v~~~i~~a~~~-~~~~~gg~~~-~~g~~i~PTvl~~v~~d~~i~~eE 346 (484)
T PLN02203 270 ELLKSTIKKFFGENPRES-KSMARILNKKHFQRLSNLLKDPRVA-ASIVHGGSID-EKKLFIEPTILLNPPLDSDIMTEE 346 (484)
T ss_pred HHHHHHHHHhcCCCCCcC-CCcCCCCCHHHHHHHHHHHHHHHhC-CeEEeCCCcC-CCCCEEeeEEEecCCCCCHHHhcC
Confidence 999999999999999886 6899999999999999999999876 6899998753 369999999999999999999999
Q ss_pred cccceEEEeeeCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHHhccceeEEEECCcCC--CCCCCCccCCCCCCCCCcc
Q 015031 313 IFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSIRAGIIWINCYFA--FDSDCPYGGYKMSGFGRDC 390 (414)
Q Consensus 313 ~fgPvl~v~~~~~~~eai~~~n~~~~gl~~sv~s~d~~~~~~~~~~l~~g~v~vN~~~~--~~~~~pfgG~~~sG~g~~~ 390 (414)
+||||++|++|+|++|||+++|+++|||++||||+|.+.++++++++++|.|+||++.. ..+.+||||+|.||+|+++
T Consensus 347 ~FGPVl~v~~~~~~~eai~~aN~~~~gL~a~vft~d~~~a~~~~~~l~~G~V~IN~~~~~~~~~~~PfGG~k~SG~Gr~~ 426 (484)
T PLN02203 347 IFGPLLPIITVKKIEDSIAFINSKPKPLAIYAFTNNEKLKRRILSETSSGSVTFNDAIIQYACDSLPFGGVGESGFGRYH 426 (484)
T ss_pred ccCCeEEEEeeCCHHHHHHHHhCCCCCceEEEEcCCHHHHHHHHHhCCcceEEECCcccccCCCCCCCCCcCcccCCccc
Confidence 99999999999999999999999999999999999999999999999999999998754 3467899999999999999
Q ss_pred hHHHHHhhhcccEEEEeC
Q 015031 391 GLESLHNYLQVKSVVTPI 408 (414)
Q Consensus 391 g~~~~~~~~~~k~i~~~~ 408 (414)
|.+++++||++|+++.+.
T Consensus 427 g~~~l~~ft~~k~v~~~~ 444 (484)
T PLN02203 427 GKYSFDTFSHEKAVLRRS 444 (484)
T ss_pred cHHHHHHhcceeEEEEcC
Confidence 999999999999998763
|
|
| >cd07137 ALDH_F3FHI Plant aldehyde dehydrogenase family 3 members F1, H1, and I1 and related proteins | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.5e-84 Score=649.79 Aligned_cols=399 Identities=27% Similarity=0.416 Sum_probs=367.7
Q ss_pred CHHHHHHHHHhHHHHHHHHHHHcCCChHHHhhccHHHHHHHHHHHHHhhhhhcCce---ecc-ccCccccccccCCcEEE
Q 015031 1 MLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEV---LKM-SRALQGYTLREPIGVVG 76 (414)
Q Consensus 1 L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~~~~~~~~~---~~~-~~~~~~~~~~~P~Gvv~ 76 (414)
|++++++|++++++|++++++|+|||..++...|+..+++.+++++..+.+..+.. .+. ......+++++|+|||+
T Consensus 27 L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~~ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~P~GVv~ 106 (432)
T cd07137 27 LKGLLRLVDENEDDIFAALRQDLGKPSAESFRDEVSVLVSSCKLAIKELKKWMAPEKVKTPLTTFPAKAEIVSEPLGVVL 106 (432)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhCCcccCCCcccCCceeEEEEecCcEEE
Confidence 68999999999999999999999999987655699999999999998775543321 111 12234678999999999
Q ss_pred EEcCCCcChHhhHHHHHHHHhcCCeEEEecCCCChhHHHHHHHHHHHcCCCCCeEEEEcCCchhHHHHHHhCCCcCeEEE
Q 015031 77 HIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSF 156 (414)
Q Consensus 77 ~i~p~n~P~~~~~~~~~~ALaaGN~vv~kps~~~~~~~~~l~~~~~~aglp~g~v~~~~~~~~~~~~~l~~~~~~~~v~~ 156 (414)
+|+|||||+...++++++||++||+||+|||+.+|.++..+.+++.++ +|+|++|++++ +.+.+..|+.| .+|.|.|
T Consensus 107 ~I~p~N~P~~~~~~~~~~ALaaGN~VvlKps~~tp~~~~~l~~~~~~~-~P~gvv~~v~g-~~~~~~~L~~~-~i~~v~f 183 (432)
T cd07137 107 VISAWNFPFLLSLEPVIGAIAAGNAVVLKPSELAPATSALLAKLIPEY-LDTKAIKVIEG-GVPETTALLEQ-KWDKIFF 183 (432)
T ss_pred EEcCCchHHHHHHHHHHHHHhcCCEEEEECCCcChHHHHHHHHHHHHh-CCcCeEEEEeC-CHHHHHHHHhC-CCCEEEE
Confidence 999999999999999999999999999999999999999999999996 99999999999 55678888887 5999999
Q ss_pred eCCHHHHHHHHHHHhhCCCCceeeeCCCCCceeecCCCCHHHHHHHHHHHHh-cccCCccccCcEEEEeCccHHHHHHHH
Q 015031 157 TGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGIL-FNKGEICVASSRVYVQEGIYDEFEKKL 235 (414)
Q Consensus 157 tGs~~~~~~i~~~~~~~~~~~~~~e~gG~~~~iV~~dadl~~a~~~i~~~~~-~~~Gq~C~a~~~v~V~~~~~~~f~~~l 235 (414)
|||+.+|+.|.+.++ .+++|+++|+||+||+||++|||++.|++.+++++| +|+||.|++++|+|||++++|+|+++|
T Consensus 184 TGs~~~g~~v~~~aa-~~~~~~~lElgG~np~iV~~dAdl~~aa~~i~~~~f~~~~GQ~C~a~~rv~V~~~i~d~f~~~l 262 (432)
T cd07137 184 TGSPRVGRIIMAAAA-KHLTPVTLELGGKCPVIVDSTVDLKVAVRRIAGGKWGCNNGQACIAPDYVLVEESFAPTLIDAL 262 (432)
T ss_pred ECChHHHHHHHHHHH-hcCCcEEEEccCCCcEEEcCCCCHHHHHHHHHHHhhhccCCCcccCCCEEEEcHHHHHHHHHHH
Confidence 999999999999987 789999999999999999999999999999999999 599999999999999999999999999
Q ss_pred HHHHhccccCCCCCCCCCccccCCHHHHHHHHHHHHHhhhcCCeEeeCCcccCCCCceeeeEEEEeCCCCCccccccccc
Q 015031 236 VEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIGKKGYYIEPTIFTNVTEDMLIAKNEIFG 315 (414)
Q Consensus 236 ~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fg 315 (414)
+++++++++|+| ++++++||++++.+++++.+++++++. |+++++||... .+|+|++|||+.+++++|++++||+||
T Consensus 263 ~~~~~~~~~g~p-~~~~~~gpli~~~~~~~v~~~i~~a~~-ga~~l~gg~~~-~~g~~~~Ptvl~~~~~~~~~~~eE~Fg 339 (432)
T cd07137 263 KNTLEKFFGENP-KESKDLSRIVNSHHFQRLSRLLDDPSV-ADKIVHGGERD-EKNLYIEPTILLDPPLDSSIMTEEIFG 339 (432)
T ss_pred HHHHHHHhCCCC-CccCCcCCcCCHHHHHHHHHHHHHHHh-CCeEEeCCCcC-CCCCEEeeEEEecCCCcchhhhccccc
Confidence 999999999999 468899999999999999999999998 89999999763 368999999999999999999999999
Q ss_pred ceEEEeeeCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHHhccceeEEEECCcCC--CCCCCCccCCCCCCCCCcchHH
Q 015031 316 PVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSIRAGIIWINCYFA--FDSDCPYGGYKMSGFGRDCGLE 393 (414)
Q Consensus 316 Pvl~v~~~~~~~eai~~~n~~~~gl~~sv~s~d~~~~~~~~~~l~~g~v~vN~~~~--~~~~~pfgG~~~sG~g~~~g~~ 393 (414)
||++|++|+|+||||+++|+++|||+++|||+|.+.++++++++++|.|+||++.. ..+.+||||+|.||+|+++|.+
T Consensus 340 Pvl~v~~~~~~deai~~~N~~~~gL~a~v~t~d~~~a~~~~~~l~~G~v~iN~~~~~~~~~~~PfGG~k~SG~G~~~g~~ 419 (432)
T cd07137 340 PLLPIITVKKIEESIEIINSRPKPLAAYVFTKNKELKRRIVAETSSGGVTFNDTVVQYAIDTLPFGGVGESGFGAYHGKF 419 (432)
T ss_pred CceEEEEeCCHHHHHHHHhcCCCCcEEEEECCCHHHHHHHHHhCCcCcEEECCccccccCCCCCCCCcCcCcCCccccHH
Confidence 99999999999999999999999999999999999999999999999999998765 3477899999999999999999
Q ss_pred HHHhhhcccEEEE
Q 015031 394 SLHNYLQVKSVVT 406 (414)
Q Consensus 394 ~~~~~~~~k~i~~ 406 (414)
++++|+++|++++
T Consensus 420 ~l~~f~~~k~v~~ 432 (432)
T cd07137 420 SFDAFSHKKAVLY 432 (432)
T ss_pred HHHHhccCceeeC
Confidence 9999999999864
|
Aldehyde dehydrogenase family members 3F1, 3H1, and 3I1 (ALDH3F1, ALDH3H1, and ALDH3I1), and similar plant sequences, are in this CD. In Arabidopsis thaliana, stress-regulated expression of ALDH3I1 was observed in leaves and osmotic stress expression of ALDH3H1 was observed in root tissue, whereas, ALDH3F1 expression was not stress responsive. Functional analysis of ALDH3I1 suggest it may be involved in a detoxification pathway in plants that limits aldehyde accumulation and oxidative stress. |
| >cd07147 ALDH_F21_RNP123 Aldehyde dehydrogenase family 21A1-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.6e-84 Score=656.52 Aligned_cols=398 Identities=36% Similarity=0.603 Sum_probs=370.9
Q ss_pred CHHHHHHHHHhHHHHHHHHHHHcCCChHHHhhccHHHHHHHHHHHHHhhhhhcCceeccc-----cCccccccccCCcEE
Q 015031 1 MLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMS-----RALQGYTLREPIGVV 75 (414)
Q Consensus 1 L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~P~Gvv 75 (414)
|+++++.|++|+++|++++++|+|||..++ ..|+..+++.+++++..+.+..++..... .+...+..++|+|||
T Consensus 49 L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a-~~ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv 127 (452)
T cd07147 49 LLHCVARLEERFEELAETIVLEAGKPIKDA-RGEVARAIDTFRIAAEEATRIYGEVLPLDISARGEGRQGLVRRFPIGPV 127 (452)
T ss_pred HHHHHHHHHHhHHHHHHHHHHHcCCCHHHH-HHHHHHHHHHHHHHHHHHHHhCCcccccccccCCCCceeEEEEeceeEE
Confidence 578999999999999999999999999875 46999999999999987765544322211 234556788999999
Q ss_pred EEEcCCCcChHhhHHHHHHHHhcCCeEEEecCCCChhHHHHHHHHHHHcCCCCCeEEEEcCCchhHHHHHHhCCCcCeEE
Q 015031 76 GHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVS 155 (414)
Q Consensus 76 ~~i~p~n~P~~~~~~~~~~ALaaGN~vv~kps~~~~~~~~~l~~~~~~aglp~g~v~~~~~~~~~~~~~l~~~~~~~~v~ 155 (414)
++|+|||||+...++++++||++||+||+|||+.+|.++..+.+++.++|+|+|++|+++++ .+.+..|+.|+++|.|.
T Consensus 128 ~~I~p~N~P~~~~~~~~~~ALaaGN~VIlKps~~~p~~~~~l~~~l~~ag~P~g~v~~v~g~-~~~~~~l~~~~~v~~v~ 206 (452)
T cd07147 128 SAITPFNFPLNLVAHKVAPAIAAGCPFVLKPASRTPLSALILGEVLAETGLPKGAFSVLPCS-RDDADLLVTDERIKLLS 206 (452)
T ss_pred EEEcCCCcHHHHHHHHHHHHHHcCCEEEEECCCCCcHHHHHHHHHHHHcCCCcCcEEEEeCC-ccchhHHhcCCCCCEEE
Confidence 99999999999999999999999999999999999999999999999999999999999984 46788999999999999
Q ss_pred EeCCHHHHHHHHHHHhhCCCCceeeeCCCCCceeecCCCCHHHHHHHHHHHHhcccCCccccCcEEEEeCccHHHHHHHH
Q 015031 156 FTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKL 235 (414)
Q Consensus 156 ~tGs~~~~~~i~~~~~~~~~~~~~~e~gG~~~~iV~~dadl~~a~~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f~~~l 235 (414)
||||+.+|+.|.+.++ .+|+++|+|||||+||++|||++.|++.+++++|.|+||.|+++++||||++++|+|+++|
T Consensus 207 fTGs~~~g~~v~~~a~---~~~v~lelgG~~p~iV~~dadl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~L 283 (452)
T cd07147 207 FTGSPAVGWDLKARAG---KKKVVLELGGNAAVIVDSDADLDFAAQRIIFGAFYQAGQSCISVQRVLVHRSVYDEFKSRL 283 (452)
T ss_pred EECCHHHHHHHHHHhC---cCceEeecCCCCcEEECCCCCHHHHHHHHHHHHHhccCCCCcCCcEEEEchhHHHHHHHHH
Confidence 9999999999999865 3699999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhccccCCCCCCCCCccccCCHHHHHHHHHHHHHhhhcCCeEeeCCcccCCCCceeeeEEEEeCCCCCccccccccc
Q 015031 236 VEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIGKKGYYIEPTIFTNVTEDMLIAKNEIFG 315 (414)
Q Consensus 236 ~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fg 315 (414)
+++++++++|+|.++++++||++++.+++++++++++++++|+++++||.. +|+|++|||+.+++++|+++++|+||
T Consensus 284 ~~~~~~~~~g~p~~~~~~~gpli~~~~~~~~~~~i~~a~~~Ga~~l~gg~~---~g~~~~Ptvl~~~~~~~~~~~~E~fg 360 (452)
T cd07147 284 VARVKALKTGDPKDDATDVGPMISESEAERVEGWVNEAVDAGAKLLTGGKR---DGALLEPTILEDVPPDMEVNCEEVFG 360 (452)
T ss_pred HHHHHhCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCEEEecCCc---CCEEEcCEEEeCCCCCChHHhCcCcC
Confidence 999999999999999999999999999999999999999999999999975 58999999999999999999999999
Q ss_pred ceEEEeeeCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHHhccceeEEEECCcCCC-CCCCCccCCCCCCCCCcchHHH
Q 015031 316 PVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSIRAGIIWINCYFAF-DSDCPYGGYKMSGFGRDCGLES 394 (414)
Q Consensus 316 Pvl~v~~~~~~~eai~~~n~~~~gl~~sv~s~d~~~~~~~~~~l~~g~v~vN~~~~~-~~~~pfgG~~~sG~g~~~g~~~ 394 (414)
||++|++|+|+||||+++|+++|||++||||+|.+.++++++++++|+|+||+.+.. .+.+||||+|.||+|+++|.+|
T Consensus 361 Pvl~v~~~~~~deai~~~n~~~~gL~~~v~t~d~~~a~~~~~~~~~G~v~vN~~~~~~~~~~pfGG~~~SG~G~~~g~~~ 440 (452)
T cd07147 361 PVVTVEPYDDFDEALAAVNDSKFGLQAGVFTRDLEKALRAWDELEVGGVVINDVPTFRVDHMPYGGVKDSGIGREGVRYA 440 (452)
T ss_pred CeEEEEEeCCHHHHHHHHhCCCCCceEEEECCCHHHHHHHHHHcCcceEEECCCCCCCCCCCCcCCccccccCCCChHHH
Confidence 999999999999999999999999999999999999999999999999999987653 4678999999999999999999
Q ss_pred HHhhhcccEEEE
Q 015031 395 LHNYLQVKSVVT 406 (414)
Q Consensus 395 ~~~~~~~k~i~~ 406 (414)
+++||+.|+|++
T Consensus 441 ~~~~~~~k~i~~ 452 (452)
T cd07147 441 IEEMTEPRLLVI 452 (452)
T ss_pred HHHhcceeEEeC
Confidence 999999999863
|
Aldehyde dehydrogenase ALDH21A1 (gene name RNP123) was first described in the moss Tortula ruralis and is believed to play an important role in the detoxification of aldehydes generated in response to desiccation- and salinity-stress, and ALDH21A1 expression represents a unique stress tolerance mechanism. So far, of plants, only the bryophyte sequence has been observed, but similar protein sequences from bacteria and archaea are also present in this CD. |
| >cd07093 ALDH_F8_HMSADH Human aldehyde dehydrogenase family 8 member A1-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.4e-84 Score=656.57 Aligned_cols=404 Identities=48% Similarity=0.829 Sum_probs=381.0
Q ss_pred CHHHHHHHHHhHHHHHHHHHHHcCCChHHHhhccHHHHHHHHHHHHHhhhhhcCceeccccCccccccccCCcEEEEEcC
Q 015031 1 MLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMSRALQGYTLREPIGVVGHIIP 80 (414)
Q Consensus 1 L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p 80 (414)
|+++++.|++++++|++++++|+||+..++...|+..+++.++++++...+..+...+...+...+.+++|+|||++|+|
T Consensus 47 L~~~a~~l~~~~~ela~~~~~e~Gk~~~~~~~~ev~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p 126 (455)
T cd07093 47 LHKVADLIEARADELALLESLDTGKPITLARTRDIPRAAANFRFFADYILQLDGESYPQDGGALNYVLRQPVGVAGLITP 126 (455)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHhHHHhCCccccCCCCceEEEEEEeeeEEEEECC
Confidence 57899999999999999999999999987666799999999999988776644443333345667789999999999999
Q ss_pred CCcChHhhHHHHHHHHhcCCeEEEecCCCChhHHHHHHHHHHHcCCCCCeEEEEcCCchhHHHHHHhCCCcCeEEEeCCH
Q 015031 81 WNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGST 160 (414)
Q Consensus 81 ~n~P~~~~~~~~~~ALaaGN~vv~kps~~~~~~~~~l~~~~~~aglp~g~v~~~~~~~~~~~~~l~~~~~~~~v~~tGs~ 160 (414)
||||+...++++++||++||+||+|||+.+|.++..+.++|.++|+|+|+++++++++.+.++.|+.|+++|.|.||||+
T Consensus 127 ~N~P~~~~~~~~~~AL~aGN~VIlkps~~~p~~~~~l~~~l~~aglP~g~v~~v~g~~~~~~~~L~~~~~i~~V~ftGs~ 206 (455)
T cd07093 127 WNLPLMLLTWKIAPALAFGNTVVLKPSEWTPLTAWLLAELANEAGLPPGVVNVVHGFGPEAGAALVAHPDVDLISFTGET 206 (455)
T ss_pred CChHHHHHHHHHHHHHhcCCEEEeECCCcCcHHHHHHHHHHHhcCCCccceEEEecCchHHHHHHhcCCCccEEEEECCH
Confidence 99999999999999999999999999999999999999999999999999999999777889999999999999999999
Q ss_pred HHHHHHHHHHhhCCCCceeeeCCCCCceeecCCCCHHHHHHHHHHHHhcccCCccccCcEEEEeCccHHHHHHHHHHHHh
Q 015031 161 DVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAK 240 (414)
Q Consensus 161 ~~~~~i~~~~~~~~~~~~~~e~gG~~~~iV~~dadl~~a~~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f~~~l~~~~~ 240 (414)
.+++.|.+.++ ++++|+++|+||+||+||++|||++.|++.+++++|.++||.|+++++||||++++|+|+++|+++++
T Consensus 207 ~~g~~v~~~aa-~~~~~~~lelgG~~~~iV~~dAdl~~a~~~i~~~~~~~~GQ~C~a~~~v~v~~~i~d~f~~~l~~~~~ 285 (455)
T cd07093 207 ATGRTIMRAAA-PNLKPVSLELGGKNPNIVFADADLDRAVDAAVRSSFSNNGEVCLAGSRILVQRSIYDEFLERFVERAK 285 (455)
T ss_pred HHHHHHHHHHh-hcccceEeecCCCCceEECCCCCHHHHHHHHHHHHHhccCCCcCCCceEEEcHHHHHHHHHHHHHHHH
Confidence 99999999988 78999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccCCCCCCCCCccccCCHHHHHHHHHHHHHhhhcCCeEeeCCcccC----CCCceeeeEEEEeCCCCCcccccccccc
Q 015031 241 AWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIG----KKGYYIEPTIFTNVTEDMLIAKNEIFGP 316 (414)
Q Consensus 241 ~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~----~~g~~~~Ptvl~~~~~~~~~~~~E~fgP 316 (414)
++++|+|.++++++||++++.+++++++++++++.+|+++++||.... ..|+|+.|||+.++++++++++||+|||
T Consensus 286 ~~~~g~p~~~~~~~gpli~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~~~~~~~~~~~~Ptvl~~~~~~~~~~~~E~fgP 365 (455)
T cd07093 286 ALKVGDPLDPDTEVGPLISKEHLEKVLGYVELARAEGATILTGGGRPELPDLEGGYFVEPTVITGLDNDSRVAQEEIFGP 365 (455)
T ss_pred hCCCCCCCCCCCCcCCCcCHHHHHHHHHHHHHHHHCCCEEEeCCCccccccCCCCceECCEEEecCCCCChHHhCCCCCc
Confidence 999999999999999999999999999999999999999999997643 3589999999999999999999999999
Q ss_pred eEEEeeeCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHHhccceeEEEECCcCCCCCCCCccCCCCCCCCCcchHHHHH
Q 015031 317 VMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSIRAGIIWINCYFAFDSDCPYGGYKMSGFGRDCGLESLH 396 (414)
Q Consensus 317 vl~v~~~~~~~eai~~~n~~~~gl~~sv~s~d~~~~~~~~~~l~~g~v~vN~~~~~~~~~pfgG~~~sG~g~~~g~~~~~ 396 (414)
|++|++|+|.||||+++|++++||++||||+|.+.++++++++++|+|+||++....+.+||||+|.||+|+++|.+|++
T Consensus 366 vl~v~~~~~~~eai~~~n~~~~gls~~i~t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~pfgG~~~SG~G~~~g~~~~~ 445 (455)
T cd07093 366 VVTVIPFDDEEEAIELANDTPYGLAAYVWTRDLGRAHRVARRLEAGTVWVNCWLVRDLRTPFGGVKASGIGREGGDYSLE 445 (455)
T ss_pred eEEEEeeCCHHHHHHHHhCCCCCceEEEECCCHHHHHHHHHhCCcceEEECCCCCCCCCCCcCCCccCcCCCCchHHHHH
Confidence 99999999999999999999999999999999999999999999999999998877778999999999999999999999
Q ss_pred hhhcccEEE
Q 015031 397 NYLQVKSVV 405 (414)
Q Consensus 397 ~~~~~k~i~ 405 (414)
+|++.|+++
T Consensus 446 ~~~~~k~~~ 454 (455)
T cd07093 446 FYTELKNVC 454 (455)
T ss_pred HHhceeEEe
Confidence 999999885
|
In humans, the aldehyde dehydrogenase family 8 member A1 (ALDH8A1) protein functions to convert 9-cis-retinal to 9-cis-retinoic acid and has a preference for NAD+. Also included in this CD is the 2-hydroxymuconic semialdehyde dehydrogenase (HMSADH) which catalyzes the conversion of 2-hydroxymuconic semialdehyde to 4-oxalocrotonate, a step in the meta cleavage pathway of aromatic hydrocarbons in bacteria. Such HMSADHs seen here are: XylG of the TOL plasmid pWW0 of Pseudomonas putida, TomC of Burkholderia cepacia G4, and AphC of Comamonas testosterone. |
| >cd07103 ALDH_F5_SSADH_GabD Mitochondrial succinate-semialdehyde dehydrogenase and ALDH family members 5A1 and 5F1-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.5e-84 Score=655.21 Aligned_cols=403 Identities=45% Similarity=0.750 Sum_probs=380.9
Q ss_pred CHHHHHHHHHhHHHHHHHHHHHcCCChHHHhhccHHHHHHHHHHHHHhhhhhcCceeccc-cCccccccccCCcEEEEEc
Q 015031 1 MLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMS-RALQGYTLREPIGVVGHII 79 (414)
Q Consensus 1 L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~-~~~~~~~~~~P~Gvv~~i~ 79 (414)
|+++++.|++++++|++++++|+|||..++ ..|+..+++.+++++..+++..+...+.. .+...+.+++|+|||++|+
T Consensus 47 L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a-~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~ 125 (451)
T cd07103 47 LRRWADLIRERAEDLARLLTLEQGKPLAEA-RGEVDYAASFLEWFAEEARRIYGRTIPSPAPGKRILVIKQPVGVVAAIT 125 (451)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHcCCCHHHH-HHHHHHHHHHHHHHHHHHHHhcCcccccCCCCcceEEEEeeceEEEEEC
Confidence 578999999999999999999999999975 57999999999999888776655443322 4566789999999999999
Q ss_pred CCCcChHhhHHHHHHHHhcCCeEEEecCCCChhHHHHHHHHHHHcCCCCCeEEEEcCCchhHHHHHHhCCCcCeEEEeCC
Q 015031 80 PWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGS 159 (414)
Q Consensus 80 p~n~P~~~~~~~~~~ALaaGN~vv~kps~~~~~~~~~l~~~~~~aglp~g~v~~~~~~~~~~~~~l~~~~~~~~v~~tGs 159 (414)
|||||+...++++++||++||+||+|||+.+|.++..+.++|.++|+|+|+++++++++.+.++.|+.|+++|.|.||||
T Consensus 126 p~N~P~~~~~~~~~~AL~aGN~VIlKps~~~~~~~~~l~~~l~~aglP~g~v~~v~~~~~~~~~~l~~~~~vd~V~ftGs 205 (451)
T cd07103 126 PWNFPAAMITRKIAPALAAGCTVVLKPAEETPLSALALAELAEEAGLPAGVLNVVTGSPAEIGEALCASPRVRKISFTGS 205 (451)
T ss_pred CCchHHHHHHHHHHHHHHcCCEEEEECCccCcHHHHHHHHHHHHcCCCcccEEEEecCchhHHHHHhcCCCCCEEEEECC
Confidence 99999999999999999999999999999999999999999999999999999999977778899999999999999999
Q ss_pred HHHHHHHHHHHhhCCCCceeeeCCCCCceeecCCCCHHHHHHHHHHHHhcccCCccccCcEEEEeCccHHHHHHHHHHHH
Q 015031 160 TDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKA 239 (414)
Q Consensus 160 ~~~~~~i~~~~~~~~~~~~~~e~gG~~~~iV~~dadl~~a~~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f~~~l~~~~ 239 (414)
+.+|+.|.+.++ ++++|+++|+|||||+||++|||++.|++.+++++|.|+||.|+++++||||++++|+|+++|++++
T Consensus 206 ~~~g~~v~~~aa-~~~~~~~lelgG~~~~iV~~dadl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~l~~~~ 284 (451)
T cd07103 206 TAVGKLLMAQAA-DTVKRVSLELGGNAPFIVFDDADLDKAVDGAIASKFRNAGQTCVCANRIYVHESIYDEFVEKLVERV 284 (451)
T ss_pred HHHHHHHHHHHH-hcCCcEEEECCCCCeEEECCCCCHHHHHHHHHHHHHHhcCCCCCCCeeEEEcHHHHHHHHHHHHHHH
Confidence 999999999987 7899999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hccccCCCCCCCCCccccCCHHHHHHHHHHHHHhhhcCCeEeeCCcccCCCCceeeeEEEEeCCCCCcccccccccceEE
Q 015031 240 KAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIGKKGYYIEPTIFTNVTEDMLIAKNEIFGPVMA 319 (414)
Q Consensus 240 ~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~ 319 (414)
+++++|+|.++++++||++++.+++++++++++++++|+++++||.....+|+|++|||+.++++++.++++|+||||++
T Consensus 285 ~~~~~g~~~~~~~~~gp~i~~~~~~~~~~~i~~a~~~ga~~l~gg~~~~~~g~~~~Ptil~~~~~~~~~~~~E~fgPvl~ 364 (451)
T cd07103 285 KKLKVGNGLDEGTDMGPLINERAVEKVEALVEDAVAKGAKVLTGGKRLGLGGYFYEPTVLTDVTDDMLIMNEETFGPVAP 364 (451)
T ss_pred HhccCCCCCCCCCCCCcCcCHHHHHHHHHHHHHHHHCCCEEEeCCCcCCCCCcEECCEEeeCCCCcCHHHhCCCCCceEE
Confidence 99999999999999999999999999999999999999999999976544789999999999999999999999999999
Q ss_pred EeeeCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHHhccceeEEEECCcCCCCCCCCccCCCCCCCCCcchHHHHHhhh
Q 015031 320 LMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSIRAGIIWINCYFAFDSDCPYGGYKMSGFGRDCGLESLHNYL 399 (414)
Q Consensus 320 v~~~~~~~eai~~~n~~~~gl~~sv~s~d~~~~~~~~~~l~~g~v~vN~~~~~~~~~pfgG~~~sG~g~~~g~~~~~~~~ 399 (414)
|++|+|.+||++++|++++||++||||+|.+.++++++++++|.|+||++....+.+||||.|.||+|+++|++++++||
T Consensus 365 v~~~~~~~eai~~~n~~~~gl~~~i~t~d~~~~~~~~~~l~~g~v~vN~~~~~~~~~pfgG~~~SG~G~~~g~~~~~~~~ 444 (451)
T cd07103 365 IIPFDTEDEVIARANDTPYGLAAYVFTRDLARAWRVAEALEAGMVGINTGLISDAEAPFGGVKESGLGREGGKEGLEEYL 444 (451)
T ss_pred EEEECCHHHHHHHHhCCCCCceEEEECCCHHHHHHHHHhCCcceEEECCCCCCCCCCCcCCCccCcCCccchHHHHHHHh
Confidence 99999999999999999999999999999999999999999999999998877788999999999999999999999999
Q ss_pred cccEEE
Q 015031 400 QVKSVV 405 (414)
Q Consensus 400 ~~k~i~ 405 (414)
++|+++
T Consensus 445 ~~k~v~ 450 (451)
T cd07103 445 ETKYVS 450 (451)
T ss_pred ceeEEe
Confidence 999875
|
Succinate-semialdehyde dehydrogenase, mitochondrial (SSADH, GabD, EC=1.2.1.24) catalyzes the NAD+-dependent oxidation of succinate semialdehyde (SSA) to succinate. This group includes the human aldehyde dehydrogenase family 5 member A1 (ALDH5A1) which is a mitochondrial homotetramer that converts SSA to succinate in the last step of 4-aminobutyric acid (GABA) catabolism. This CD also includes the Arabidopsis SSADH gene product ALDH5F1. Mutations in this gene result in the accumulation of H2O2, suggesting a role in plant defense against the environmental stress of elevated reactive oxygen species. |
| >cd07136 ALDH_YwdH-P39616 Bacillus subtilis aldehyde dehydrogenase ywdH-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.8e-84 Score=649.21 Aligned_cols=396 Identities=31% Similarity=0.483 Sum_probs=366.5
Q ss_pred CHHHHHHHHHhHHHHHHHHHHHcCCChHHHhhccHHHHHHHHHHHHHhhhhhcCc-eeccc---cCccccccccCCcEEE
Q 015031 1 MLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGE-VLKMS---RALQGYTLREPIGVVG 76 (414)
Q Consensus 1 L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~~~~~~~~-~~~~~---~~~~~~~~~~P~Gvv~ 76 (414)
|+++++.|++|+++|++++++|+|||..++...|+..+++.+++++..++...+. ..+.. .+...+.+++|+|||+
T Consensus 26 L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a~~~ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~ 105 (449)
T cd07136 26 LKKLKQAIKKYENEILEALKKDLGKSEFEAYMTEIGFVLSEINYAIKHLKKWMKPKRVKTPLLNFPSKSYIYYEPYGVVL 105 (449)
T ss_pred HHHHHHHHHHhHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCccCCccccCCceeEEEEecCeEEE
Confidence 5799999999999999999999999999765569999999999999877665432 22211 2445778999999999
Q ss_pred EEcCCCcChHhhHHHHHHHHhcCCeEEEecCCCChhHHHHHHHHHHHcCCCCCeEEEEcCCchhHHHHHHhCCCcCeEEE
Q 015031 77 HIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSF 156 (414)
Q Consensus 77 ~i~p~n~P~~~~~~~~~~ALaaGN~vv~kps~~~~~~~~~l~~~~~~aglp~g~v~~~~~~~~~~~~~l~~~~~~~~v~~ 156 (414)
+|+|||||+...++++++||++||+||+|||+.+|.++..+.+++.++ +|+|++|++++ +.+.+..|++|+ +|.|.|
T Consensus 106 ~i~p~N~P~~~~~~~~~~ALaaGN~vi~Kps~~tp~~~~~l~~~~~~a-lP~gv~~~v~g-~~~~~~~L~~~~-v~~V~f 182 (449)
T cd07136 106 IIAPWNYPFQLALAPLIGAIAAGNTAVLKPSELTPNTSKVIAKIIEET-FDEEYVAVVEG-GVEENQELLDQK-FDYIFF 182 (449)
T ss_pred EECCCchHHHHHHHHHHHHHhcCCEEEEECcccchHHHHHHHHHHHHh-CCCCEEEEEeC-ChHHHHHHhcCC-CCEEEE
Confidence 999999999999999999999999999999999999999999999999 99999999998 556788888766 999999
Q ss_pred eCCHHHHHHHHHHHhhCCCCceeeeCCCCCceeecCCCCHHHHHHHHHHHHhcccCCccccCcEEEEeCccHHHHHHHHH
Q 015031 157 TGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLV 236 (414)
Q Consensus 157 tGs~~~~~~i~~~~~~~~~~~~~~e~gG~~~~iV~~dadl~~a~~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f~~~l~ 236 (414)
|||+++|+.|.+.++ +.++|+++|+||+||+||++|||++.|++.+++++|.|+||.|++++++|||++++|+|+++|+
T Consensus 183 TGS~~~g~~i~~~aa-~~~~~v~lElgGknp~iV~~dADld~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~d~f~~~L~ 261 (449)
T cd07136 183 TGSVRVGKIVMEAAA-KHLTPVTLELGGKSPCIVDEDANLKLAAKRIVWGKFLNAGQTCVAPDYVLVHESVKEKFIKELK 261 (449)
T ss_pred ECCHHHHHHHHHHHH-hcCCCEEEEecCCCeEEECCCCCHHHHHHHHHHHHHcccCCcccCCCEEEEcHHHHHHHHHHHH
Confidence 999999999999887 7889999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhccccCCCCCCCCCccccCCHHHHHHHHHHHHHhhhcCCeEeeCCcccCCCCceeeeEEEEeCCCCCcccccccccc
Q 015031 237 EKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIGKKGYYIEPTIFTNVTEDMLIAKNEIFGP 316 (414)
Q Consensus 237 ~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgP 316 (414)
++++++++|+|.+ .+++||++++.++++++++++++ ++++||... .+|+|+.|||+.+++++|.+++||+|||
T Consensus 262 ~~~~~~~~g~p~~-~~~~gpli~~~~~~~i~~~i~~a-----~~~~gG~~~-~~g~~~~Ptvl~~v~~~~~~~~eE~FGP 334 (449)
T cd07136 262 EEIKKFYGEDPLE-SPDYGRIINEKHFDRLAGLLDNG-----KIVFGGNTD-RETLYIEPTILDNVTWDDPVMQEEIFGP 334 (449)
T ss_pred HHHHHhcCCCCCC-CCCccCcCCHHHHHHHHHHHhcc-----eEEECCCcC-CCCCEEeeEEEecCCCcChHHhccccCC
Confidence 9999999999987 88999999999999999999764 799999763 3689999999999999999999999999
Q ss_pred eEEEeeeCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHHhccceeEEEECCcCC--CCCCCCccCCCCCCCCCcchHHH
Q 015031 317 VMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSIRAGIIWINCYFA--FDSDCPYGGYKMSGFGRDCGLES 394 (414)
Q Consensus 317 vl~v~~~~~~~eai~~~n~~~~gl~~sv~s~d~~~~~~~~~~l~~g~v~vN~~~~--~~~~~pfgG~~~sG~g~~~g~~~ 394 (414)
|++|++|+|+||||+++|+++|||+++|||+|.+.++++++++++|.|+||+... ..+.+||||+|.||+|+++|.++
T Consensus 335 Vl~v~~~~~~~eai~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~~G~v~vN~~~~~~~~~~~PfGG~k~SG~G~~~g~~~ 414 (449)
T cd07136 335 ILPVLTYDTLDEAIEIIKSRPKPLALYLFSEDKKVEKKVLENLSFGGGCINDTIMHLANPYLPFGGVGNSGMGSYHGKYS 414 (449)
T ss_pred eeEEEEeCCHHHHHHHHhCCCCCceEEEECCCHHHHHHHHHhCCcceEEECCccccccCCCCCccCcCcccCCcccCHHH
Confidence 9999999999999999999999999999999999999999999999999998764 34678999999999999999999
Q ss_pred HHhhhcccEEEEe
Q 015031 395 LHNYLQVKSVVTP 407 (414)
Q Consensus 395 ~~~~~~~k~i~~~ 407 (414)
+++||+.|+++++
T Consensus 415 l~~~t~~k~v~~~ 427 (449)
T cd07136 415 FDTFSHKKSILKK 427 (449)
T ss_pred HHHhccceEEEEc
Confidence 9999999999876
|
Uncharacterized Bacillus subtilis ywdH aldehyde dehydrogenase (locus P39616) most closely related to the ALDHs and fatty ALDHs of families 3 and 14, and similar sequences, are included in this CD. |
| >cd07105 ALDH_SaliADH Salicylaldehyde dehydrogenase, DoxF-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.7e-84 Score=649.82 Aligned_cols=398 Identities=36% Similarity=0.575 Sum_probs=370.7
Q ss_pred CHHHHHHHHHhHHHHHHHHHHHcCCChHHHhhccHHHHHHHHHHHHHhhhhhcCceeccc-cCccccccccCCcEEEEEc
Q 015031 1 MLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMS-RALQGYTLREPIGVVGHII 79 (414)
Q Consensus 1 L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~-~~~~~~~~~~P~Gvv~~i~ 79 (414)
|+++++.|++|.++|++++++|+|||..++ ..|+..+++.++++++..++..+...+.. .+...+.+++|+|||++|+
T Consensus 28 L~~~a~~l~~~~~~la~~~~~e~Gk~~~~~-~~ei~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVV~~I~ 106 (432)
T cd07105 28 LLKAADLLESRRDEFIEAMMEETGATAAWA-GFNVDLAAGMLREAASLITQIIGGSIPSDKPGTLAMVVKEPVGVVLGIA 106 (432)
T ss_pred HHHHHHHHHhCHHHHHHHHHHHhCCCHHHH-HHHHHHHHHHHHHHHHHHHHhcCeecccCCCCceeEEEEecceEEEEEC
Confidence 578999999999999999999999998754 56999999999999988766544333322 3445678899999999999
Q ss_pred CCCcChHhhHHHHHHHHhcCCeEEEecCCCChhHHHHHHHHHHHcCCCCCeEEEEcCC---chhHHHHHHhCCCcCeEEE
Q 015031 80 PWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGF---GPTAGAAIASHMDIDKVSF 156 (414)
Q Consensus 80 p~n~P~~~~~~~~~~ALaaGN~vv~kps~~~~~~~~~l~~~~~~aglp~g~v~~~~~~---~~~~~~~l~~~~~~~~v~~ 156 (414)
|||||+...++++++||++||+||+|||+.+|.++..+.+++.++|+|+|++|+++++ +.++++.|+.||++|.|.|
T Consensus 107 p~N~P~~~~~~~~~~ALaaGN~VVlKps~~~p~~~~~l~~~~~~aGlP~gv~~~v~g~~~~~~~~~~~l~~~~~v~~v~f 186 (432)
T cd07105 107 PWNAPVILGTRAIAYPLAAGNTVVLKASELSPRTHWLIGRVFHEAGLPKGVLNVVTHSPEDAPEVVEALIAHPAVRKVNF 186 (432)
T ss_pred CcCcHHHHHHHHHHHHHhcCCEEEEECCccChHHHHHHHHHHHHcCcCCCcEEEEeCCCCchHHHHHHHhcCCCCCEEEE
Confidence 9999999999999999999999999999999999999999999999999999999974 3457899999999999999
Q ss_pred eCCHHHHHHHHHHHhhCCCCceeeeCCCCCceeecCCCCHHHHHHHHHHHHhcccCCccccCcEEEEeCccHHHHHHHHH
Q 015031 157 TGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLV 236 (414)
Q Consensus 157 tGs~~~~~~i~~~~~~~~~~~~~~e~gG~~~~iV~~dadl~~a~~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f~~~l~ 236 (414)
|||+.+|+.|.+.++ ++++|+++|+||+||+||++|+|++.|++.+++++|+|+||.|+++++||||++++|+|+++|+
T Consensus 187 tGs~~~g~~i~~~aa-~~~~~~~lElgGk~p~iV~~dadl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~l~ 265 (432)
T cd07105 187 TGSTRVGRIIAETAA-KHLKPVLLELGGKAPAIVLEDADLDAAANAALFGAFLNSGQICMSTERIIVHESIADEFVEKLK 265 (432)
T ss_pred ECCHHHHHHHHHHHH-hcCCeEEEeCCCCCceEECCCCCHHHHHHHHHHHHHhcCCCCCcCCceEEEcHHHHHHHHHHHH
Confidence 999999999999987 8899999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhccccCCCCCCCCCccccCCHHHHHHHHHHHHHhhhcCCeEeeCCcccC-CCCceeeeEEEEeCCCCCccccccccc
Q 015031 237 EKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIG-KKGYYIEPTIFTNVTEDMLIAKNEIFG 315 (414)
Q Consensus 237 ~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~-~~g~~~~Ptvl~~~~~~~~~~~~E~fg 315 (414)
++++++++| .+++||++++.+++++++++++++++|+++++||.... ..|+|+.|||+.+++++|.+++||+||
T Consensus 266 ~~~~~~~~g-----~~~~gp~i~~~~~~~~~~~i~~a~~~ga~~~~gg~~~~~~~~~~~~Ptvl~~~~~~~~~~~eE~fg 340 (432)
T cd07105 266 AAAEKLFAG-----PVVLGSLVSAAAADRVKELVDDALSKGAKLVVGGLADESPSGTSMPPTILDNVTPDMDIYSEESFG 340 (432)
T ss_pred HHHHhhcCC-----CCcccccCCHHHHHHHHHHHHHHHHCCCEEEeCCCcCCCCCCeEEeeEEEecCCCCCHHHhCCCcC
Confidence 999999988 57899999999999999999999999999999997653 368999999999999999999999999
Q ss_pred ceEEEeeeCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHHhccceeEEEECCcCCC-CCCCCccCCCCCCCCCcchHHH
Q 015031 316 PVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSIRAGIIWINCYFAF-DSDCPYGGYKMSGFGRDCGLES 394 (414)
Q Consensus 316 Pvl~v~~~~~~~eai~~~n~~~~gl~~sv~s~d~~~~~~~~~~l~~g~v~vN~~~~~-~~~~pfgG~~~sG~g~~~g~~~ 394 (414)
||++|++|+|.|||++++|++++||++||||+|.+.++++++++++|+|+||++... .+.+||||+|.||+|+++|.++
T Consensus 341 Pvl~v~~~~~~deai~~~n~~~~gL~~~v~t~d~~~~~~~~~~l~~g~v~vN~~~~~~~~~~PfgG~~~SG~G~~~g~~~ 420 (432)
T cd07105 341 PVVSIIRVKDEEEAVRIANDSEYGLSAAVFTRDLARALAVAKRIESGAVHINGMTVHDEPTLPHGGVKSSGYGRFNGKWG 420 (432)
T ss_pred CeEEEEeeCCHHHHHHHHhCCCCCceEEEEcCCHHHHHHHHHhCCcCeEEECCCCCCCCCCCCCCCcccccccccChHHH
Confidence 999999999999999999999999999999999999999999999999999998653 4779999999999999999999
Q ss_pred HHhhhcccEEE
Q 015031 395 LHNYLQVKSVV 405 (414)
Q Consensus 395 ~~~~~~~k~i~ 405 (414)
+++|++.|+++
T Consensus 421 l~~~~~~k~v~ 431 (432)
T cd07105 421 IDEFTETKWIT 431 (432)
T ss_pred HHHhhceEEEe
Confidence 99999999986
|
Salicylaldehyde dehydrogenase (DoxF, SaliADH, EC=1.2.1.65) involved in the upper naphthalene catabolic pathway of Pseudomonas strain C18 and other similar sequences are present in this CD. |
| >cd07135 ALDH_F14-YMR110C Saccharomyces cerevisiae aldehyde dehydrogenase family 14 and related proteins | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.5e-84 Score=648.65 Aligned_cols=396 Identities=30% Similarity=0.461 Sum_probs=366.5
Q ss_pred CHHHHHHHHHhHHHHHHHHHHHcCCChHHHhhccHHHHHHHHHHHHHhhhhhcCc-eeccc----cCccccccccCCcEE
Q 015031 1 MLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGE-VLKMS----RALQGYTLREPIGVV 75 (414)
Q Consensus 1 L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~~~~~~~~-~~~~~----~~~~~~~~~~P~Gvv 75 (414)
|+++++.|++|+++|++++++|+|||+.++...|+..+++.+++++..+++.... ..... .+...++.++|+|||
T Consensus 33 L~~~a~~l~~~~~~l~~~~~~e~Gk~~~e~~~~ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv 112 (436)
T cd07135 33 LKQLYWAVKDNEEAIVEALKKDLGRPPFETLLTEVSGVKNDILHMLKNLKKWAKDEKVKDGPLAFMFGKPRIRKEPLGVV 112 (436)
T ss_pred HHHHHHHHHHhHHHHHHHHHHHhCCCHHHHhHHHHHHHHHHHHHHHHHHHHhhCCcccCCcccccCCCceEEEeccCcEE
Confidence 6799999999999999999999999999764469999999999999887665322 11111 234578899999999
Q ss_pred EEEcCCCcChHhhHHHHHHHHhcCCeEEEecCCCChhHHHHHHHHHHHcCCCCCeEEEEcCCchhHHHHHHhCCCcCeEE
Q 015031 76 GHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVS 155 (414)
Q Consensus 76 ~~i~p~n~P~~~~~~~~~~ALaaGN~vv~kps~~~~~~~~~l~~~~~~aglp~g~v~~~~~~~~~~~~~l~~~~~~~~v~ 155 (414)
++|+|||||+...++++++||++||+||+|||+.+|.++..+.+++.+ |+|+|++|++++++.+. ..|+.|+ +|.|.
T Consensus 113 ~~I~p~N~P~~~~~~~~~~ALaaGN~Vi~Kps~~~p~~~~~l~~l~~~-~lP~g~v~vv~g~~~~~-~~l~~~~-vd~v~ 189 (436)
T cd07135 113 LIIGPWNYPVLLALSPLVGAIAAGCTVVLKPSELTPHTAALLAELVPK-YLDPDAFQVVQGGVPET-TALLEQK-FDKIF 189 (436)
T ss_pred EEECCCcchHHHHHHHHHHHHHcCCEEEEECCccChHHHHHHHHHHHH-hCCcCEEEEEcCCchhH-HHHHhCC-CCEEE
Confidence 999999999999999999999999999999999999999999999999 69999999999866554 5688999 99999
Q ss_pred EeCCHHHHHHHHHHHhhCCCCceeeeCCCCCceeecCCCCHHHHHHHHHHHHhcccCCccccCcEEEEeCccHHHHHHHH
Q 015031 156 FTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKL 235 (414)
Q Consensus 156 ~tGs~~~~~~i~~~~~~~~~~~~~~e~gG~~~~iV~~dadl~~a~~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f~~~l 235 (414)
||||+.+|+.|.+.++ .+++|+++|+||+||+||++|||++.|++.+++++|.|+||.|+++++||||++++|+|+++|
T Consensus 190 ftGs~~~g~~i~~~aa-~~~~~~~lelgG~~~~iV~~dADl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~d~f~~~l 268 (436)
T cd07135 190 YTGSGRVGRIIAEAAA-KHLTPVTLELGGKSPVIVTKNADLELAAKRILWGKFGNAGQICVAPDYVLVDPSVYDEFVEEL 268 (436)
T ss_pred EECCcHHHHHHHHHHH-hcCCCeEEEccCCCcEEECCCCCHHHHHHHHHHHHhccCCceecCCCEEeccHHHHHHHHHHH
Confidence 9999999999999887 789999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhccccCCCCCCCCCccccCCHHHHHHHHHHHHHhhhcCCeEeeCCcccCCCCceeeeEEEEeCCCCCccccccccc
Q 015031 236 VEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIGKKGYYIEPTIFTNVTEDMLIAKNEIFG 315 (414)
Q Consensus 236 ~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fg 315 (414)
+++++++++|+| ++++++||+++..+++++.++++++ |+++++||.... +|+|++|||+.+++++|+++++|+||
T Consensus 269 ~~~~~~~~~g~p-~~~~~~gpli~~~~~~~i~~~v~~a---g~~v~~gg~~~~-~g~~~~Ptvl~~~~~~~~~~~~E~Fg 343 (436)
T cd07135 269 KKVLDEFYPGGA-NASPDYTRIVNPRHFNRLKSLLDTT---KGKVVIGGEMDE-ATRFIPPTIVSDVSWDDSLMSEELFG 343 (436)
T ss_pred HHHHHHhcCCCC-CCCCCcCCCCCHHHHHHHHHHHHhc---CCeEEECCCcCC-CCCEEccEEEecCCCccHHHhccccC
Confidence 999999999999 8999999999999999999999987 789999997653 78999999999999999999999999
Q ss_pred ceEEEeeeCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHHhccceeEEEECCcCC--CCCCCCccCCCCCCCCCcchHH
Q 015031 316 PVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSIRAGIIWINCYFA--FDSDCPYGGYKMSGFGRDCGLE 393 (414)
Q Consensus 316 Pvl~v~~~~~~~eai~~~n~~~~gl~~sv~s~d~~~~~~~~~~l~~g~v~vN~~~~--~~~~~pfgG~~~sG~g~~~g~~ 393 (414)
||++|++|+|+||||+++|+++|||++||||+|.+.++++++++++|.|+||+... ..+.+||||+|.||+|+++|.+
T Consensus 344 Pvl~v~~~~~~deai~~an~~~~gL~~~v~t~d~~~a~~~~~~l~~g~v~iN~~~~~~~~~~~PfGG~k~SG~G~~~g~~ 423 (436)
T cd07135 344 PVLPIIKVDDLDEAIKVINSRDTPLALYIFTDDKSEIDHILTRTRSGGVVINDTLIHVGVDNAPFGGVGDSGYGAYHGKY 423 (436)
T ss_pred CceEEEecCCHHHHHHHHhCCCCCceEEEEcCCHHHHHHHHhcCCcCeEEECCccccccCCCCCcCCcCcccCCccccHh
Confidence 99999999999999999999999999999999999999999999999999998764 3478999999999999999999
Q ss_pred HHHhhhcccEEE
Q 015031 394 SLHNYLQVKSVV 405 (414)
Q Consensus 394 ~~~~~~~~k~i~ 405 (414)
|+++||+.|++.
T Consensus 424 ~l~~~t~~k~i~ 435 (436)
T cd07135 424 GFDTFTHERTVV 435 (436)
T ss_pred HHHHhccccccc
Confidence 999999999873
|
Aldehyde dehydrogenase family 14 (ALDH14), isolated mainly from the mitochondrial outer membrane of Saccharomyces cerevisiae (YMR110C) and most closely related to the plant and animal ALDHs and fatty ALDHs family 3 members, and similar fungal sequences, are present in this CD. |
| >PLN00412 NADP-dependent glyceraldehyde-3-phosphate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.7e-84 Score=656.13 Aligned_cols=401 Identities=31% Similarity=0.473 Sum_probs=370.6
Q ss_pred CHHHHHHHHHhHHHHHHHHHHHcCCChHHHhhccHHHHHHHHHHHHHhhhhhcCc--eecc---c---cCccccccccCC
Q 015031 1 MLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGE--VLKM---S---RALQGYTLREPI 72 (414)
Q Consensus 1 L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~~~~~~~~--~~~~---~---~~~~~~~~~~P~ 72 (414)
|+++++.|++|+++|++++++|+|||..++ ..|+..+++.+++++..+.+.... .... + .+...+.+++|+
T Consensus 81 L~~~a~~l~~~~~el~~~~~~e~Gk~~~~a-~~Ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~ 159 (496)
T PLN00412 81 LHKAAAILKEHKAPIAECLVKEIAKPAKDA-VTEVVRSGDLISYTAEEGVRILGEGKFLVSDSFPGNERNKYCLTSKIPL 159 (496)
T ss_pred HHHHHHHHHHhHHHHHHHHHHHcCCCHHHH-HHHHHHHHHHHHHHHHHHHHHhcCCcccccccCCCccCCceeEEEEecc
Confidence 578999999999999999999999999976 579999999999998776554321 1111 1 122346788999
Q ss_pred cEEEEEcCCCcChHhhHHHHHHHHhcCCeEEEecCCCChhHHHHHHHHHHHcCCCCCeEEEEcCCchhHHHHHHhCCCcC
Q 015031 73 GVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDID 152 (414)
Q Consensus 73 Gvv~~i~p~n~P~~~~~~~~~~ALaaGN~vv~kps~~~~~~~~~l~~~~~~aglp~g~v~~~~~~~~~~~~~l~~~~~~~ 152 (414)
|||++|+|||||+...++++++||++||+||+|||+.+|.++..+++++.++|+|+|++|++++++.+.++.|..||++|
T Consensus 160 GVv~~I~p~N~P~~~~~~~i~~ALaaGN~VIlKPs~~t~~~~~~l~~~l~~aglP~g~~~~v~g~~~~~~~~l~~~~~v~ 239 (496)
T PLN00412 160 GVVLAIPPFNYPVNLAVSKIAPALIAGNAVVLKPPTQGAVAALHMVHCFHLAGFPKGLISCVTGKGSEIGDFLTMHPGVN 239 (496)
T ss_pred eEEEEECCCCchHHHHHHHHHHHHHcCCEEEEECCccCcHHHHHHHHHHHHhCCCcccEEEEecCchHHHHHHhcCCCcC
Confidence 99999999999999999999999999999999999999999999999999999999999999987778899999999999
Q ss_pred eEEEeCCHHHHHHHHHHHhhCCCCceeeeCCCCCceeecCCCCHHHHHHHHHHHHhcccCCccccCcEEEEeCccHHHHH
Q 015031 153 KVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFE 232 (414)
Q Consensus 153 ~v~~tGs~~~~~~i~~~~~~~~~~~~~~e~gG~~~~iV~~dadl~~a~~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f~ 232 (414)
.|.|||| .+|+.+.+.++ .+|+++|+|||||+||++|||++.|++.+++++|+|+||.|+++++||||++++|+|+
T Consensus 240 ~V~ftGs-~~g~~v~~~a~---~~~~~lElGG~~p~iV~~dADl~~Aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~d~f~ 315 (496)
T PLN00412 240 CISFTGG-DTGIAISKKAG---MVPLQMELGGKDACIVLEDADLDLAAANIIKGGFSYSGQRCTAVKVVLVMESVADALV 315 (496)
T ss_pred EEEEeCh-HHHHHHHHHhC---CCcEEEEcCCCceEEEcCCCCHHHHHHHHHHHHHhcCCCCCccCeEEEEcHHHHHHHH
Confidence 9999999 99999988764 7899999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhccccCCCCCCCCCccccCCHHHHHHHHHHHHHhhhcCCeEeeCCcccCCCCceeeeEEEEeCCCCCcccccc
Q 015031 233 KKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIGKKGYYIEPTIFTNVTEDMLIAKNE 312 (414)
Q Consensus 233 ~~l~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E 312 (414)
++|+++++++++|+|.+ ++++||+++..+++++.+++++++.+|++++++|.. .|+|+.|||+.+++++|++++||
T Consensus 316 ~~l~~~~~~~~~g~p~~-~~~~gp~i~~~~~~~v~~~i~~a~~~Ga~~l~~~~~---~g~~~~Ptvl~~v~~~~~i~~eE 391 (496)
T PLN00412 316 EKVNAKVAKLTVGPPED-DCDITPVVSESSANFIEGLVMDAKEKGATFCQEWKR---EGNLIWPLLLDNVRPDMRIAWEE 391 (496)
T ss_pred HHHHHHHHhCccCCCcc-cCCcCCCcCHHHHHHHHHHHHHHHHCCCEEEecCCC---CCeEEecEEEeCCCCCCHHHhCc
Confidence 99999999999999987 789999999999999999999999999999997753 68999999999999999999999
Q ss_pred cccceEEEeeeCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHHhccceeEEEECCcCC-CCCCCCccCCCCCCCCCcch
Q 015031 313 IFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSIRAGIIWINCYFA-FDSDCPYGGYKMSGFGRDCG 391 (414)
Q Consensus 313 ~fgPvl~v~~~~~~~eai~~~n~~~~gl~~sv~s~d~~~~~~~~~~l~~g~v~vN~~~~-~~~~~pfgG~~~sG~g~~~g 391 (414)
+||||++|++|+|+||||+++|+++|||++||||+|.+.+.++++++++|+|+||++.. ..+.+||||+|.||+|+++|
T Consensus 392 ~FgPvl~v~~~~~~deai~~an~~~~gL~a~v~t~d~~~a~~~~~~l~~G~v~vN~~~~~~~~~~PfGG~k~SG~G~~~g 471 (496)
T PLN00412 392 PFGPVLPVIRINSVEEGIHHCNASNFGLQGCVFTRDINKAILISDAMETGTVQINSAPARGPDHFPFQGLKDSGIGSQGI 471 (496)
T ss_pred CCCCeEEEEEeCCHHHHHHHHhCCCCCceEEEEcCCHHHHHHHHHhCCcceEEEcCCCCCCCCCCCCCCccccccCCCCh
Confidence 99999999999999999999999999999999999999999999999999999999864 44578999999999999999
Q ss_pred HHHHHhhhcccEEEEeCCC
Q 015031 392 LESLHNYLQVKSVVTPIFN 410 (414)
Q Consensus 392 ~~~~~~~~~~k~i~~~~~~ 410 (414)
.+|+++||++|+++.+.+.
T Consensus 472 ~~~~~~ft~~k~i~~~~~~ 490 (496)
T PLN00412 472 TNSINMMTKVKSTVINLPK 490 (496)
T ss_pred HHHHHHhcceEEEEEecCC
Confidence 9999999999999887643
|
|
| >cd07133 ALDH_CALDH_CalB Coniferyl aldehyde dehydrogenase-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-83 Score=646.51 Aligned_cols=399 Identities=30% Similarity=0.441 Sum_probs=367.0
Q ss_pred CHHHHHHHHHhHHHHHHHHHHHcCCC-hHHHhhccHHHHHHHHHHHHHhhhhhcCcee-ccc---cCccccccccCCcEE
Q 015031 1 MLKFADLIEEHAEVLAVLEALDAGKL-HSWAKMGDIPGAANTLRYYAGAADKIHGEVL-KMS---RALQGYTLREPIGVV 75 (414)
Q Consensus 1 L~~~a~~l~~~~~~l~~~~~~e~Gk~-~~~~~~~ev~~~~~~l~~~~~~~~~~~~~~~-~~~---~~~~~~~~~~P~Gvv 75 (414)
|+++++.|++|+++|++++++|+||+ ..++...|+..+++.+++++..+.+..+... ... .+...+.+++|+|||
T Consensus 26 L~~~a~~l~~~~~el~~~~~~e~Gk~~~~ea~~~ev~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv 105 (434)
T cd07133 26 LDRLKALLLDNQDALAEAISADFGHRSRHETLLAEILPSIAGIKHARKHLKKWMKPSRRHVGLLFLPAKAEVEYQPLGVV 105 (434)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHHHHHHHHHHHHhCCcccCCccccCCCceEEEEecccEE
Confidence 67999999999999999999999985 5555557999999999999987765433221 111 234568899999999
Q ss_pred EEEcCCCcChHhhHHHHHHHHhcCCeEEEecCCCChhHHHHHHHHHHHcCCCCCeEEEEcCCchhHHHHHHhCCCcCeEE
Q 015031 76 GHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVS 155 (414)
Q Consensus 76 ~~i~p~n~P~~~~~~~~~~ALaaGN~vv~kps~~~~~~~~~l~~~~~~aglp~g~v~~~~~~~~~~~~~l~~~~~~~~v~ 155 (414)
++|+|||||+...++++++||++||+||+|||+.+|.++..+.+++.++ +|+|+++++++ +.+.+..|..|+ +|.|.
T Consensus 106 ~~I~pwN~P~~~~~~~~~~ALaaGN~vvlKps~~~p~~~~~l~~l~~~a-lP~g~~~~v~g-~~~~~~~l~~~~-v~~V~ 182 (434)
T cd07133 106 GIIVPWNYPLYLALGPLIAALAAGNRVMIKPSEFTPRTSALLAELLAEY-FDEDEVAVVTG-GADVAAAFSSLP-FDHLL 182 (434)
T ss_pred EEEcCCchHHHHHHHHHHHHHHcCCEEEEECCCcChHHHHHHHHHHHHh-CCcCeEEEEeC-ChHHHHHHHhCC-CCEEE
Confidence 9999999999999999999999999999999999999999999999998 99999999998 556788888766 99999
Q ss_pred EeCCHHHHHHHHHHHhhCCCCceeeeCCCCCceeecCCCCHHHHHHHHHHHHhcccCCccccCcEEEEeCccHHHHHHHH
Q 015031 156 FTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKL 235 (414)
Q Consensus 156 ~tGs~~~~~~i~~~~~~~~~~~~~~e~gG~~~~iV~~dadl~~a~~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f~~~l 235 (414)
||||+.+|+.|.+.++ ++++|+++|+||+||+||++|||++.|++.+++++|+|+||.|++++++|||++++|+|+++|
T Consensus 183 ftGs~~~g~~v~~~aa-~~~~~~~lElgGk~~~iV~~dadl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~~~f~~~l 261 (434)
T cd07133 183 FTGSTAVGRHVMRAAA-ENLTPVTLELGGKSPAIIAPDADLAKAAERIAFGKLLNAGQTCVAPDYVLVPEDKLEEFVAAA 261 (434)
T ss_pred EeCchHHHHHHHHHHH-hcCceEEEEccCCCcEEEeCCCCHHHHHHHHHHHHhccCCCcccCCCEEEEcHHHHHHHHHHH
Confidence 9999999999999887 788999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhccccCCCCCCCCCccccCCHHHHHHHHHHHHHhhhcCCeEeeCCcccC--CCCceeeeEEEEeCCCCCccccccc
Q 015031 236 VEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIG--KKGYYIEPTIFTNVTEDMLIAKNEI 313 (414)
Q Consensus 236 ~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~--~~g~~~~Ptvl~~~~~~~~~~~~E~ 313 (414)
+++++++++|+ ++++++||++++.+++++++++++++++|+++++||.... .+|+|++|||+.+++++|++++||+
T Consensus 262 ~~~~~~~~~g~--~~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~v~~gg~~~~~~~~g~~~~Ptvl~~~~~~~~i~~eE~ 339 (434)
T cd07133 262 KAAVAKMYPTL--ADNPDYTSIINERHYARLQGLLEDARAKGARVIELNPAGEDFAATRKLPPTLVLNVTDDMRVMQEEI 339 (434)
T ss_pred HHHHHHhcCCC--CCCCCcCCCCCHHHHHHHHHHHHHHHhCCCEEEecCCCCcCCCCCcEEeeEEEeCCCCCCccccccc
Confidence 99999998886 4678999999999999999999999999999999987643 3689999999999999999999999
Q ss_pred ccceEEEeeeCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHHhccceeEEEECCcCC--CCCCCCccCCCCCCCCCcch
Q 015031 314 FGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSIRAGIIWINCYFA--FDSDCPYGGYKMSGFGRDCG 391 (414)
Q Consensus 314 fgPvl~v~~~~~~~eai~~~n~~~~gl~~sv~s~d~~~~~~~~~~l~~g~v~vN~~~~--~~~~~pfgG~~~sG~g~~~g 391 (414)
||||++|++|+|.||||+++|++++||++||||+|.+.++++++++++|.|+||++.. ..+.+||||+|.||+|+++|
T Consensus 340 FgPvl~v~~~~~~~eai~~~n~~~~gL~~~v~t~d~~~a~~~~~~l~~G~v~iN~~~~~~~~~~~PfGG~k~SG~G~~~g 419 (434)
T cd07133 340 FGPILPILTYDSLDEAIDYINARPRPLALYYFGEDKAEQDRVLRRTHSGGVTINDTLLHVAQDDLPFGGVGASGMGAYHG 419 (434)
T ss_pred CCCeeEEEEeCCHHHHHHHHhCCCCCceEEEECCCHHHHHHHHHhCCcceEEECCcccccCCCCCCcCCCCcccCCCcCC
Confidence 9999999999999999999999999999999999999999999999999999998764 44789999999999999999
Q ss_pred HHHHHhhhcccEEE
Q 015031 392 LESLHNYLQVKSVV 405 (414)
Q Consensus 392 ~~~~~~~~~~k~i~ 405 (414)
.+|+++||++|+++
T Consensus 420 ~~~~~~ft~~k~v~ 433 (434)
T cd07133 420 KEGFLTFSHAKPVF 433 (434)
T ss_pred HHHHHHhcccceec
Confidence 99999999999874
|
Coniferyl aldehyde dehydrogenase (CALDH, EC=1.2.1.68) of Pseudomonas sp. strain HR199 (CalB) which catalyzes the NAD+-dependent oxidation of coniferyl aldehyde to ferulic acid, and similar sequences, are present in this CD. |
| >cd07098 ALDH_F15-22 Aldehyde dehydrogenase family 15A1 and 22A1-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-83 Score=653.41 Aligned_cols=405 Identities=34% Similarity=0.553 Sum_probs=372.9
Q ss_pred CHHHHHHHHHhHHHHHHHHHHHcCCChHHHhhccHHHHHHHHHHHHHhhhhhcCc-eeccc---cCccccccccCCcEEE
Q 015031 1 MLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGE-VLKMS---RALQGYTLREPIGVVG 76 (414)
Q Consensus 1 L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~~~~~~~~-~~~~~---~~~~~~~~~~P~Gvv~ 76 (414)
|+++++.|.+++++|++++++|+|||..++...|+..+++.+++++..+.+.... ..+.. .+...+++++|+|||+
T Consensus 46 L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~ 125 (465)
T cd07098 46 LRSLLKYILENQEEICRVACRDTGKTMVDASLGEILVTCEKIRWTLKHGEKALRPESRPGGLLMFYKRARVEYEPLGVVG 125 (465)
T ss_pred HHHHHHHHHHhHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhCCcccCCccccCCceeEEEEecceeEE
Confidence 5789999999999999999999999999876679999999999998776553222 11111 1234577889999999
Q ss_pred EEcCCCcChHhhHHHHHHHHhcCCeEEEecCCCChhHHHHHHHH----HHHcCCCCCeEEEEcCCchhHHHHHHhCCCcC
Q 015031 77 HIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHL----AKLAGVPDGVLNVVPGFGPTAGAAIASHMDID 152 (414)
Q Consensus 77 ~i~p~n~P~~~~~~~~~~ALaaGN~vv~kps~~~~~~~~~l~~~----~~~aglp~g~v~~~~~~~~~~~~~l~~~~~~~ 152 (414)
+|+|||||+..++.++++||++||+||+|||+.+|+++..+.++ |.++|+|+|++|++++++ +.++.|+.|++++
T Consensus 126 ~I~p~n~P~~~~~~~~~~ALaaGN~VIlKps~~~p~~~~~~~~~~~~~l~~aGlP~gvv~~v~g~~-~~~~~L~~~~~v~ 204 (465)
T cd07098 126 AIVSWNYPFHNLLGPIIAALFAGNAIVVKVSEQVAWSSGFFLSIIRECLAACGHDPDLVQLVTCLP-ETAEALTSHPVID 204 (465)
T ss_pred EEcccCcHHHHHHHHHHHHHHcCCEEEEECCCcCcHHHHHHHHHHHHHHHhcCCCCCeEEEEECCH-HHHHHHhcCCCCC
Confidence 99999999999999999999999999999999999999876555 578999999999999955 7899999999999
Q ss_pred eEEEeCCHHHHHHHHHHHhhCCCCceeeeCCCCCceeecCCCCHHHHHHHHHHHHhcccCCccccCcEEEEeCccHHHHH
Q 015031 153 KVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFE 232 (414)
Q Consensus 153 ~v~~tGs~~~~~~i~~~~~~~~~~~~~~e~gG~~~~iV~~dadl~~a~~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f~ 232 (414)
.|.||||+.+++.|.+.++ ++++|+++|+||+||+||++|||++.|++.+++++|.|+||.|+++++||||++++|+|+
T Consensus 205 ~V~ftGs~~~g~~v~~~a~-~~~~~~~lelgG~~~~iV~~dadl~~a~~~i~~~~~~~~GQ~C~a~~rv~V~~~i~d~f~ 283 (465)
T cd07098 205 HITFIGSPPVGKKVMAAAA-ESLTPVVLELGGKDPAIVLDDADLDQIASIIMRGTFQSSGQNCIGIERVIVHEKIYDKLL 283 (465)
T ss_pred EEEEECCHHHHHHHHHHHH-hcCCeEEEECCCCCeEEECCCCCHHHHHHHHHHHHHhcCCCCCcCCcEEEEcHHHHHHHH
Confidence 9999999999999999987 789999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhccccCCCCCCCCCccccCCHHHHHHHHHHHHHhhhcCCeEeeCCcccC----CCCceeeeEEEEeCCCCCcc
Q 015031 233 KKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIG----KKGYYIEPTIFTNVTEDMLI 308 (414)
Q Consensus 233 ~~l~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~----~~g~~~~Ptvl~~~~~~~~~ 308 (414)
++|+++++.+++|+|.++++++||++++.+++++.+++++++++|+++++||.... ..|+|+.|||+.+++++|++
T Consensus 284 ~~L~~~~~~l~~G~p~~~~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~~~~~~~g~~~~Ptvl~~~~~~~~~ 363 (465)
T cd07098 284 EILTDRVQALRQGPPLDGDVDVGAMISPARFDRLEELVADAVEKGARLLAGGKRYPHPEYPQGHYFPPTLLVDVTPDMKI 363 (465)
T ss_pred HHHHHHHHhcCCCCCCCCCCCcCCCCCHHHHHHHHHHHHHHHHCCCEEEeCCccCCcCcCCCCcEEcCEEEeCCCCCCHH
Confidence 99999999999999999999999999999999999999999999999999986532 25899999999999999999
Q ss_pred cccccccceEEEeeeCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHHhccceeEEEECCcCC--CCCCCCccCCCCCCC
Q 015031 309 AKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSIRAGIIWINCYFA--FDSDCPYGGYKMSGF 386 (414)
Q Consensus 309 ~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~sv~s~d~~~~~~~~~~l~~g~v~vN~~~~--~~~~~pfgG~~~sG~ 386 (414)
+++|+||||++|++|+|.|||++++|+++|||++||||+|.+.++++++++++|.|+||++.+ ..+.+||||+|.||+
T Consensus 364 ~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gLsa~i~t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~~~PfgG~k~SG~ 443 (465)
T cd07098 364 AQEEVFGPVMVVMKASDDEEAVEIANSTEYGLGASVFGKDIKRARRIASQLETGMVAINDFGVNYYVQQLPFGGVKGSGF 443 (465)
T ss_pred HhCCCcCCeEEEEEeCCHHHHHHHHhCCCCCceEEEEcCCHHHHHHHHHhCCcceEEECCCCCCCCCCCCCcCccccccC
Confidence 999999999999999999999999999999999999999999999999999999999998754 346899999999999
Q ss_pred CCcchHHHHHhhhcccEEEEe
Q 015031 387 GRDCGLESLHNYLQVKSVVTP 407 (414)
Q Consensus 387 g~~~g~~~~~~~~~~k~i~~~ 407 (414)
|+++|.+++++|+++|+++.+
T Consensus 444 G~~~g~~~~~~~~~~k~~~~~ 464 (465)
T cd07098 444 GRFAGEEGLRGLCNPKSVTED 464 (465)
T ss_pred CccChHHHHHHhheeEEEEEe
Confidence 999999999999999999764
|
Aldehyde dehydrogenase family members ALDH15A1 (Saccharomyces cerevisiae YHR039C) and ALDH22A1 (Arabidopsis thaliana, EC=1.2.1.3), and similar sequences, are in this CD. Significant improvement of stress tolerance in tobacco plants was observed by overexpressing the ALDH22A1 gene from maize (Zea mays) and was accompanied by a reduction of malondialdehyde derived from cellular lipid peroxidation. |
| >TIGR01722 MMSDH methylmalonic acid semialdehyde dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-83 Score=653.21 Aligned_cols=403 Identities=32% Similarity=0.496 Sum_probs=374.3
Q ss_pred CHHHHHHHHHhHHHHHHHHHHHcCCChHHHhhccHHHHHHHHHHHHHhhhhhcCceeccc-cCccccccccCCcEEEEEc
Q 015031 1 MLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMS-RALQGYTLREPIGVVGHII 79 (414)
Q Consensus 1 L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~-~~~~~~~~~~P~Gvv~~i~ 79 (414)
|+++++.|++++++|+++++.|+|||..++ ..|+..+++.+++++.......+...+.. .+...+.+++|+|||++|+
T Consensus 66 L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a-~~ev~~~i~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~P~Gvv~~I~ 144 (477)
T TIGR01722 66 LLRYQALLKEHRDEIAELITAEHGKTHSDA-LGDVARGLEVVEHACGVNSLLKGETSTQVATRVDVYSIRQPLGVCAGIT 144 (477)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcCCCHHHH-HHHHHHHHHHHHHHHHHHHHhcCcccccCCCCceEEEEEcccceEEEEc
Confidence 578999999999999999999999999975 57999999999999887766554433211 2334567899999999999
Q ss_pred CCCcChHhhHHHHHHHHhcCCeEEEecCCCChhHHHHHHHHHHHcCCCCCeEEEEcCCchhHHHHHHhCCCcCeEEEeCC
Q 015031 80 PWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGS 159 (414)
Q Consensus 80 p~n~P~~~~~~~~~~ALaaGN~vv~kps~~~~~~~~~l~~~~~~aglp~g~v~~~~~~~~~~~~~l~~~~~~~~v~~tGs 159 (414)
|||||+...++++++||++||+||+|||+.+|.++..+.+++.++|+|+|++|++++ +.+.++.|+.||+++.|.||||
T Consensus 145 p~N~P~~~~~~~~~~ALaaGN~VilKps~~~p~~~~~l~~~l~~aglP~g~~~~v~g-~~~~~~~L~~~~~v~~V~ftGS 223 (477)
T TIGR01722 145 PFNFPAMIPLWMFPIAIACGNTFVLKPSEKVPSAAVKLAELFSEAGAPDGVLNVVHG-DKEAVDRLLEHPDVKAVSFVGS 223 (477)
T ss_pred cCChHHHHHHHHHHHHHhcCCEEEeeCcccChHHHHHHHHHHHHhCcCCCeEEEEeC-CHHHHHHHHcCCCcCEEEEECC
Confidence 999999999999999999999999999999999999999999999999999999998 4567889999999999999999
Q ss_pred HHHHHHHHHHHhhCCCCceeeeCCCCCceeecCCCCHHHHHHHHHHHHhcccCCccccCcEEEEeCccHHHHHHHHHHHH
Q 015031 160 TDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKA 239 (414)
Q Consensus 160 ~~~~~~i~~~~~~~~~~~~~~e~gG~~~~iV~~dadl~~a~~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f~~~l~~~~ 239 (414)
+.+|+.|.+.++ ..++|+++|+||+||+||++|||++.|++.+++++|.|+||.|++++++|||+++ ++|+++|++++
T Consensus 224 ~~~g~~v~~~a~-~~~~~v~lElGG~n~~iV~~dADl~~a~~~i~~~~f~~~GQ~C~a~~rl~v~~~~-~~f~~~l~~~~ 301 (477)
T TIGR01722 224 TPIGRYIHTTGS-AHGKRVQALGGAKNHMVVMPDADKDAAADALVGAAYGAAGQRCMAISAAVLVGAA-DEWVPEIRERA 301 (477)
T ss_pred HHHHHHHHHHHH-hcCCeEEEECCCCCceEECCCCCHHHHHHHHHHHHHHhcCCCCCCCeEEEEeCcH-HHHHHHHHHHH
Confidence 999999999877 7889999999999999999999999999999999999999999999999999998 99999999999
Q ss_pred hccccCCCCCCCCCccccCCHHHHHHHHHHHHHhhhcCCeEeeCCcccC----CCCceeeeEEEEeCCCCCccccccccc
Q 015031 240 KAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIG----KKGYYIEPTIFTNVTEDMLIAKNEIFG 315 (414)
Q Consensus 240 ~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~----~~g~~~~Ptvl~~~~~~~~~~~~E~fg 315 (414)
+++++|+|.++++++||++++.+++++++++++++++|+++++||.... .+|+|++|||+.+++++|.++++|+||
T Consensus 302 ~~~~~G~~~~~~~~~Gp~i~~~~~~~~~~~i~~a~~~Ga~il~gg~~~~~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~Fg 381 (477)
T TIGR01722 302 EKIRIGPGDDPGAEMGPLITPQAKDRVASLIAGGAAEGAEVLLDGRGYKVDGYEEGNWVGPTLLERVPPTMKAYQEEIFG 381 (477)
T ss_pred hcCCCCCCCCCCCCcCCCcCHHHHHHHHHHHHHHHHCCCEEEeCCCcCCCCCCCCCeEECCEEeeCCCCCChhhhCCCCC
Confidence 9999999999999999999999999999999999999999999997531 358999999999999999999999999
Q ss_pred ceEEEeeeCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHHhccceeEEEECCcCC-CCCCCCccCCCCCCCC--CcchH
Q 015031 316 PVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSIRAGIIWINCYFA-FDSDCPYGGYKMSGFG--RDCGL 392 (414)
Q Consensus 316 Pvl~v~~~~~~~eai~~~n~~~~gl~~sv~s~d~~~~~~~~~~l~~g~v~vN~~~~-~~~~~pfgG~~~sG~g--~~~g~ 392 (414)
||++|++|+|++|||+++|+++|||++||||+|.+.++++++++++|.|+||++.. ..+.+||||+|.||+| +++|.
T Consensus 382 Pvl~V~~~~~~~eai~~~n~~~~gl~~~v~t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~~pfgG~k~SG~G~~~~~g~ 461 (477)
T TIGR01722 382 PVLCVLEADTLEEAIALINASPYGNGTAIFTRDGAAARRFQHEIEVGQVGVNVPIPVPLPYFSFTGWKDSFFGDHHIYGK 461 (477)
T ss_pred CeEEEEEeCCHHHHHHHHhCCCCCCeEEEEcCCHHHHHHHHHhCCeeeEEECCCCCCCCCCCCCCccccccCCCCccChH
Confidence 99999999999999999999999999999999999999999999999999998654 3367899999999999 57899
Q ss_pred HHHHhhhcccEEEEe
Q 015031 393 ESLHNYLQVKSVVTP 407 (414)
Q Consensus 393 ~~~~~~~~~k~i~~~ 407 (414)
+++++||+.|+++++
T Consensus 462 ~~l~~~~~~k~i~~~ 476 (477)
T TIGR01722 462 QGTHFYTRGKTVTTR 476 (477)
T ss_pred HHHHHhcCeeEEEEe
Confidence 999999999999875
|
In Bacillus, a highly homologous protein to methylmalonic acid semialdehyde dehydrogenase, groups out from the main MMSDH clade with Listeria and Sulfolobus. This Bacillus protein has been suggested to be located in an iol operon and/or involved in myo-inositol catabolism, converting malonic semialdehyde to acetyl CoA ad CO2. The preceeding enzymes responsible for valine catabolism are present in Bacillus, Listeria, and Sulfolobus. |
| >TIGR03240 arg_catab_astD succinylglutamic semialdehyde dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=3e-83 Score=652.16 Aligned_cols=404 Identities=30% Similarity=0.438 Sum_probs=369.8
Q ss_pred CHHHHHHHHHhHHHHHHHHHHHcCCChHHHhhccHHHHHHHHHHHHHhhhhhcCceeccccCccccccccCCcEEEEEcC
Q 015031 1 MLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMSRALQGYTLREPIGVVGHIIP 80 (414)
Q Consensus 1 L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p 80 (414)
|+++++.|++|+++|++++++|+|||..++ ..|+..+++.+++++....+..+.......+...+++++|+|||++|+|
T Consensus 63 L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a-~~ev~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~P~GVv~~I~P 141 (484)
T TIGR03240 63 VQRFAALLEERKEALARVIARETGKPLWET-RTEVASMIGKVAISIKAYHERTGESENPMPDGRAVLRHRPHGVVAVFGP 141 (484)
T ss_pred HHHHHHHHHHhHHHHHHHHHHHcCCCHHHH-HHHHHHHHHHHHHHHHHHHHhcCccccCCCCceeEEEEecccEEEEECC
Confidence 578999999999999999999999999975 5799999999998887765544432211123346788999999999999
Q ss_pred CCcChHhhHHHHHHHHhcCCeEEEecCCCChhHHHHHHHHHHHcCCCCCeEEEEcCCchhHHHHHHhCCCcCeEEEeCCH
Q 015031 81 WNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGST 160 (414)
Q Consensus 81 ~n~P~~~~~~~~~~ALaaGN~vv~kps~~~~~~~~~l~~~~~~aglp~g~v~~~~~~~~~~~~~l~~~~~~~~v~~tGs~ 160 (414)
||||+...++++++||++||+||+|||+.+|.++..+.+++.++|+|+|++|++++ +.+.++.|+.||.+|.|.||||+
T Consensus 142 wN~P~~~~~~~i~~ALaaGN~VVlKPs~~tp~t~~~l~~~~~~aGlP~gvv~~v~g-~~~~~~~L~~~~~vd~V~fTGS~ 220 (484)
T TIGR03240 142 YNFPGHLPNGHIVPALLAGNTVVFKPSELTPWVAEETVKLWEKAGLPAGVLNLVQG-ARETGVALAAHPDIDGLLFTGSS 220 (484)
T ss_pred CchHHHHHHHHHHHHHHcCCEEEEECCccccHHHHHHHHHHHHhCcCcccEEEEeC-CHHHHHHHhcCCCCCEEEEECCH
Confidence 99999999999999999999999999999999999999999999999999999998 56789999999999999999999
Q ss_pred HHHHHHHHHHhhCCCCceeeeCCCCCceeecCCCCHHHHHHHHHHHHhcccCCccccCcEEEEeCccH-HHHHHHHHHHH
Q 015031 161 DVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIY-DEFEKKLVEKA 239 (414)
Q Consensus 161 ~~~~~i~~~~~~~~~~~~~~e~gG~~~~iV~~dadl~~a~~~i~~~~~~~~Gq~C~a~~~v~V~~~~~-~~f~~~l~~~~ 239 (414)
++|+.|.+.++....+++++|+|||||+||++|||++.|++.+++++|.|+||.|+++++||||++++ |+|+++|++.+
T Consensus 221 ~~G~~i~~~aa~~~~~~~~lElGGk~p~iV~~dADl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~~~~d~f~~~l~~~~ 300 (484)
T TIGR03240 221 NTGHLLHRQFAGRPEKILALEMGGNNPLIVDEVADIDAAVHLIIQSAFISAGQRCTCARRLLVPDGAQGDAFLARLVEVA 300 (484)
T ss_pred HHHHHHHHHhhhcCCCcEEEECCCCCeEEECCCCCHHHHHHHHHHHHHhcCCCCCcCCcEEEEeccccHHHHHHHHHHHH
Confidence 99999999876345688999999999999999999999999999999999999999999999999985 99999999999
Q ss_pred hccccCCC-CCCCCCccccCCHHHHHHHHHHHHHhhhcCCeEeeCCcccCCCCceeeeEEEEeCCCCCcccccccccceE
Q 015031 240 KAWVVGDP-FDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIGKKGYYIEPTIFTNVTEDMLIAKNEIFGPVM 318 (414)
Q Consensus 240 ~~~~~g~~-~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl 318 (414)
+++++|+| .++++++||+++..+++++.+++++++++|+++++||...+++++|++|||+ +++++|.++++|+||||+
T Consensus 301 ~~~~~g~~~~~~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~~~~gg~~~~~~~~~i~PTvl-~v~~~~~i~~eE~FGPVl 379 (484)
T TIGR03240 301 ERLTVGAWDAEPQPFMGAVISLQAAQRLLAAQAKLLALGGKSLLAMRQLDPGAALLTPGII-DVTGVAELPDEEHFGPLL 379 (484)
T ss_pred HhcccCCCCcCCCCcccccCCHHHHHHHHHHHHHHHHCCCEEEeCCCcCCCCCEEEcCEEE-ccCCCCHHHhCCCcCCeE
Confidence 99999997 5778899999999999999999999999999999988755456899999999 689999999999999999
Q ss_pred EEeeeCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHHhccceeEEEECCcCC-CCCCCCccCCCCCCCCCcchHHHHHh
Q 015031 319 ALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSIRAGIIWINCYFA-FDSDCPYGGYKMSGFGRDCGLESLHN 397 (414)
Q Consensus 319 ~v~~~~~~~eai~~~n~~~~gl~~sv~s~d~~~~~~~~~~l~~g~v~vN~~~~-~~~~~pfgG~~~sG~g~~~g~~~~~~ 397 (414)
+|++|+|+||||+++|+++|||++||||+|.+.++++++++++|.|+||+... ..+.+||||+|.||+|+++|.++++
T Consensus 380 ~v~~~~~~~eai~~~n~~~~gL~~~v~t~d~~~a~~~~~~l~aG~v~iN~~~~~~~~~~pfGG~~~SG~g~~~g~~~~~- 458 (484)
T TIGR03240 380 QVIRYDDFDEAIAIANNTRFGLSAGLLSDDRELYDRFLLEIRAGIVNWNKPLTGASSAAPFGGIGASGNHRPSAYYAAD- 458 (484)
T ss_pred EEEEeCCHHHHHHHHhCCCCCceEEEEcCCHHHHHHHHHhCCcceEEEECCCCCCCCCCCcCCcccccCCCCCchHHHh-
Confidence 99999999999999999999999999999999999999999999999998754 3467899999999999999977766
Q ss_pred hhcccEEEEeC
Q 015031 398 YLQVKSVVTPI 408 (414)
Q Consensus 398 ~~~~k~i~~~~ 408 (414)
|++.|+++++.
T Consensus 459 ~~~~~~~~~~~ 469 (484)
T TIGR03240 459 YCAYPVASLEA 469 (484)
T ss_pred heeeeEEEEec
Confidence 99999998874
|
Members of this protein family are succinylglutamic semialdehyde dehydrogenase (EC 1.2.1.71), the fourth enzyme in the arginine succinyltransferase (AST) pathway for arginine catabolism. |
| >cd07125 ALDH_PutA-P5CDH Delta(1)-pyrroline-5-carboxylate dehydrogenase, PutA | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.8e-83 Score=654.21 Aligned_cols=404 Identities=33% Similarity=0.474 Sum_probs=373.9
Q ss_pred CHHHHHHHHHhHHHHHHHHHHHcCCChHHHhhccHHHHHHHHHHHHHhhhhhcCc-eeccccCccccccccCCcEEEEEc
Q 015031 1 MLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGE-VLKMSRALQGYTLREPIGVVGHII 79 (414)
Q Consensus 1 L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~~~~~~~~-~~~~~~~~~~~~~~~P~Gvv~~i~ 79 (414)
|+++++.|++++++|++++++|+|||..++ ..|+..+++.+++++..+++..+. ..+.+.+...+.+++|+|||++|+
T Consensus 97 L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a-~~ev~~~i~~l~~~~~~~~~~~~~~~~~~~~g~~~~~~~~P~GVV~~I~ 175 (518)
T cd07125 97 LEKAADLLEANRGELIALAAAEAGKTLADA-DAEVREAIDFCRYYAAQARELFSDPELPGPTGELNGLELHGRGVFVCIS 175 (518)
T ss_pred HHHHHHHHHHhHHHHHHHHHHHcCCCHHHH-HHHHHHHHHHHHHHHHHHHHhcCCccccCCCCceeEEEEecccEEEEEC
Confidence 578999999999999999999999999976 469999999999999888765443 233334566789999999999999
Q ss_pred CCCcChHhhHHHHHHHHhcCCeEEEecCCCChhHHHHHHHHHHHcCCCCCeEEEEcCCchhHHHHHHhCCCcCeEEEeCC
Q 015031 80 PWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGS 159 (414)
Q Consensus 80 p~n~P~~~~~~~~~~ALaaGN~vv~kps~~~~~~~~~l~~~~~~aglp~g~v~~~~~~~~~~~~~l~~~~~~~~v~~tGs 159 (414)
|||||+...++++++||++||+||+|||+.+|.++..+.+++.++|+|+|++|++++++.+.+..|..|+++|.|.||||
T Consensus 176 p~N~P~~~~~~~i~~ALaaGN~VVlKps~~tp~~~~~l~~ll~eaGlP~gvv~vv~g~~~~~~~~L~~~~~vd~V~ftGs 255 (518)
T cd07125 176 PWNFPLAIFTGQIAAALAAGNTVIAKPAEQTPLIAARAVELLHEAGVPRDVLQLVPGDGEEIGEALVAHPRIDGVIFTGS 255 (518)
T ss_pred CcchHHHHHHHHHHHHHHcCCEEEEeCCCcCcHHHHHHHHHHHHcCCCCCcEEEEecCchhhHHHHhcCCCcCEEEEECC
Confidence 99999999999999999999999999999999999999999999999999999999976668899999999999999999
Q ss_pred HHHHHHHHHHHhhC--CCCceeeeCCCCCceeecCCCCHHHHHHHHHHHHhcccCCccccCcEEEEeCccHHHHHHHHHH
Q 015031 160 TDVGRQVMQAAATS--NLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVE 237 (414)
Q Consensus 160 ~~~~~~i~~~~~~~--~~~~~~~e~gG~~~~iV~~dadl~~a~~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f~~~l~~ 237 (414)
+.+++.|.+.++.. ..+|+++|+|||||+||++|||++.|++.+++++|.|+||.|+++++||||++++|+|+++|++
T Consensus 256 ~~~g~~i~~~aa~~~~~~~~v~lElgGk~p~iV~~dADl~~Aa~~iv~g~f~nsGQ~C~a~~rv~V~~~i~d~f~~~l~~ 335 (518)
T cd07125 256 TETAKLINRALAERDGPILPLIAETGGKNAMIVDSTALPEQAVKDVVQSAFGSAGQRCSALRLLYLQEEIAERFIEMLKG 335 (518)
T ss_pred HHHHHHHHHHhhhccCCCceEEEEcCCCCeEEECCCCCHHHHHHHHHHHHHhcCCCCCCCCeEEEEcchhHHHHHHHHHH
Confidence 99999999987622 2789999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhccccCCCCCCCCCccccCCHHHHHHHHHHHHHhhhcCCeEeeCCcccCCCCceeeeEEEEeCCCCCcccccccccce
Q 015031 238 KAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIGKKGYYIEPTIFTNVTEDMLIAKNEIFGPV 317 (414)
Q Consensus 238 ~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPv 317 (414)
+++++++|+|.++++++||++++.+++++++++++++.. +++++||.....+|+|+.|||+.++ +|++++||+||||
T Consensus 336 ~~~~~~~g~p~~~~~~~gpli~~~~~~~v~~~i~~a~~~-~~vl~gg~~~~~~g~~~~Ptvl~~v--~~~i~~eE~FgPV 412 (518)
T cd07125 336 AMASLKVGDPWDLSTDVGPLIDKPAGKLLRAHTELMRGE-AWLIAPAPLDDGNGYFVAPGIIEIV--GIFDLTTEVFGPI 412 (518)
T ss_pred HHhcCCccCCCCCCCCcCCCcCHHHHHHHHHHHHHHHhC-CEEEeCCCcCCCCCeEEccEEEeec--CChHhhCcccCCe
Confidence 999999999999999999999999999999999999874 6899998754336999999999887 8999999999999
Q ss_pred EEEeeeC--CHHHHHHHHhcCCCCceEEEecCCHHHHHHHHhccceeEEEECCcCCC--CCCCCccCCCCCCCCC-cchH
Q 015031 318 MALMKFK--TVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSIRAGIIWINCYFAF--DSDCPYGGYKMSGFGR-DCGL 392 (414)
Q Consensus 318 l~v~~~~--~~~eai~~~n~~~~gl~~sv~s~d~~~~~~~~~~l~~g~v~vN~~~~~--~~~~pfgG~~~sG~g~-~~g~ 392 (414)
++|++|+ |.||||+++|+++|||++||||+|.+.++++++++++|.|+||+.... .+.+||||+|.||+|+ .+|.
T Consensus 413 l~v~~~~~~~~deAi~~~n~~~~gLta~Vft~d~~~~~~~~~~l~~G~V~IN~~~~~~~~~~~PfGG~~~SG~G~~~gg~ 492 (518)
T cd07125 413 LHVIRFKAEDLDEAIEDINATGYGLTLGIHSRDEREIEYWRERVEAGNLYINRNITGAIVGRQPFGGWGLSGTGPKAGGP 492 (518)
T ss_pred EEEEEeCCCCHHHHHHHHhCCCCCceEEEEeCCHHHHHHHHHhCCcCeEEECCCCCCCCCCCCCCCCcccccCCcccccH
Confidence 9999999 999999999999999999999999999999999999999999997653 3578999999999995 6789
Q ss_pred HHHHhhhcccEEEEeC
Q 015031 393 ESLHNYLQVKSVVTPI 408 (414)
Q Consensus 393 ~~~~~~~~~k~i~~~~ 408 (414)
+++++||++|++++++
T Consensus 493 ~~~~~ft~~k~i~~~~ 508 (518)
T cd07125 493 NYLLRFGNEKTVSLNT 508 (518)
T ss_pred HHHHHhcceEEEEEEc
Confidence 9999999999998865
|
The proline catabolic enzymes of the aldehyde dehydrogenase (ALDH) protein superfamily, proline dehydrogenase and Delta(1)-pyrroline-5-carboxylate dehydrogenase (P5CDH, (EC=1.5.1.12 )), catalyze the two-step oxidation of proline to glutamate; P5CDH catalyzes the oxidation of glutamate semialdehyde, utilizing NAD+ as the electron acceptor. In some bacteria, the two enzymes are fused into the bifunctional flavoenzyme, proline utilization A (PutA) These enzymes play important roles in cellular redox control, superoxide generation, and apoptosis. In certain prokaryotes such as Escherichia coli, PutA is also a transcriptional repressor of the proline utilization genes. |
| >cd07128 ALDH_MaoC-N N-terminal domain of the monoamine oxidase C dehydratase | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.2e-83 Score=651.10 Aligned_cols=399 Identities=26% Similarity=0.339 Sum_probs=359.5
Q ss_pred CHHHHHHHHHhHHHHHHHHHHHcCCChHHHhhccHHHHHHHHHHHHHhhhhhcC--------ceecccc-C-cccccccc
Q 015031 1 MLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHG--------EVLKMSR-A-LQGYTLRE 70 (414)
Q Consensus 1 L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~~~~~~~--------~~~~~~~-~-~~~~~~~~ 70 (414)
|+++++.|++|+++|+++ ++|+|||..++ ..|+..+++.+++++.++++... +..+... + ...+++++
T Consensus 65 L~~~a~~l~~~~~~la~l-~~e~Gkp~~ea-~~Ev~~~~~~~~~~a~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 142 (513)
T cd07128 65 LKALAKYLMERKEDLYAL-SAATGATRRDS-WIDIDGGIGTLFAYASLGRRELPNAHFLVEGDVEPLSKDGTFVGQHILT 142 (513)
T ss_pred HHHHHHHHHHHHHHHHHH-HHHcCCCHHHH-HHHHHHHHHHHHHHHHHHHhhccccccccCCcccccCCCccccceEEEE
Confidence 678999999999999996 99999999875 47999999999999998766542 1111111 1 13467799
Q ss_pred C-CcEEEEEcCCCcChHhhHHHHHHHHhcCCeEEEecCCCChhHHHHHHHHHHHcC-CCCCeEEEEcCCchhHHHHHHhC
Q 015031 71 P-IGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAG-VPDGVLNVVPGFGPTAGAAIASH 148 (414)
Q Consensus 71 P-~Gvv~~i~p~n~P~~~~~~~~~~ALaaGN~vv~kps~~~~~~~~~l~~~~~~ag-lp~g~v~~~~~~~~~~~~~l~~~ 148 (414)
| +|||++|+|||||++..++++++||++||+||+|||+.+|+++..+.+++.++| +|+|++|++++++.+++..+
T Consensus 143 P~~GVv~~I~pwN~P~~~~~~~~~~ALaaGN~VVlKPs~~tp~~~~~l~~~~~eaG~lP~gv~~~v~g~~~~~~~~l--- 219 (513)
T cd07128 143 PRRGVAVHINAFNFPVWGMLEKFAPALLAGVPVIVKPATATAYLTEAVVKDIVESGLLPEGALQLICGSVGDLLDHL--- 219 (513)
T ss_pred ecccEEEEECCcccHHHHHHHHHHHHHHcCCEEEEECCCCCCHHHHHHHHHHHHhCCCCCCcEEEecCChHHHhccc---
Confidence 9 599999999999999999999999999999999999999999999999999999 89999999998543333332
Q ss_pred CCcCeEEEeCCHHHHHHHHHHHh-hCCCCceeeeCCCCCceeecCCCC-----HHHHHHHHHHHHhcccCCccccCcEEE
Q 015031 149 MDIDKVSFTGSTDVGRQVMQAAA-TSNLKPVSLELGGKSPLLIFDDVD-----VNTAADMALLGILFNKGEICVASSRVY 222 (414)
Q Consensus 149 ~~~~~v~~tGs~~~~~~i~~~~~-~~~~~~~~~e~gG~~~~iV~~dad-----l~~a~~~i~~~~~~~~Gq~C~a~~~v~ 222 (414)
+++|.|.||||+++|+.|.+.++ .++++|+++|+|||||+||++||| ++.+++.+++++|.|+||.|++++|+|
T Consensus 220 ~~~d~v~fTGS~~~G~~i~~~a~~a~~~~~~~lElGGknp~IV~~DAd~~~~dld~aa~~iv~~~f~~aGQ~C~a~~rv~ 299 (513)
T cd07128 220 GEQDVVAFTGSAATAAKLRAHPNIVARSIRFNAEADSLNAAILGPDATPGTPEFDLFVKEVAREMTVKAGQKCTAIRRAF 299 (513)
T ss_pred CCCCEEEEECCHHHHHHHHHHhhhhccCceEEEeccCcCcEEECCCCCcchhhHHHHHHHHHHHHHHhcCCcccCCceEE
Confidence 57899999999999999999752 367899999999999999999999 999999999999999999999999999
Q ss_pred EeCccHHHHHHHHHHHHhccccCCCCCCCCCccccCCHHHHHHHHHHHHHhhhcCCeEeeCCccc-------CCCCceee
Q 015031 223 VQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPI-------GKKGYYIE 295 (414)
Q Consensus 223 V~~~~~~~f~~~l~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ga~v~~gg~~~-------~~~g~~~~ 295 (414)
||+++||+|+++|+++++++++|+|.++++++||++++.+++++++++++++++ +++++||... ...|+|++
T Consensus 300 V~~~i~d~f~~~l~~~~~~l~~G~p~~~~~~lGpli~~~~~~~i~~~i~~a~~~-A~vl~GG~~~~~~~~~~~~~g~~~~ 378 (513)
T cd07128 300 VPEARVDAVIEALKARLAKVVVGDPRLEGVRMGPLVSREQREDVRAAVATLLAE-AEVVFGGPDRFEVVGADAEKGAFFP 378 (513)
T ss_pred EehHHHHHHHHHHHHHHHhcccCCCccCCCCcCCCCCHHHHHHHHHHHHHHHhC-CEEEECCCccccccCCCCCCCEEEC
Confidence 999999999999999999999999999999999999999999999999999988 9999999652 13589999
Q ss_pred eEEEEeCCCC--CcccccccccceEEEeeeCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHHhccc--eeEEEECCcCC
Q 015031 296 PTIFTNVTED--MLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSIR--AGIIWINCYFA 371 (414)
Q Consensus 296 Ptvl~~~~~~--~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~sv~s~d~~~~~~~~~~l~--~g~v~vN~~~~ 371 (414)
|||+.+++++ |.+++||+||||++|++|+|.|||++++|+++|||++||||+|.+.+++++++++ +|+|+||+..+
T Consensus 379 PTvl~~v~~~~~~~i~~eE~FGPVl~V~~~~~~deai~~aN~~~~gL~asvft~d~~~~~~~~~~l~~~~G~v~IN~~~~ 458 (513)
T cd07128 379 PTLLLCDDPDAATAVHDVEAFGPVATLMPYDSLAEAIELAARGRGSLVASVVTNDPAFARELVLGAAPYHGRLLVLNRDS 458 (513)
T ss_pred CEEEeccCCcccchHHhCCCcCCeEEEEeeCCHHHHHHHHhcCCCCeeEEEEeCCHHHHHHHHHHHHhhCCEEEEcCCcc
Confidence 9999988874 8999999999999999999999999999999999999999999999999999997 99999998642
Q ss_pred ---------CCCCCCccCCCCCCCCCc-chHHHHHhhhcccEEE
Q 015031 372 ---------FDSDCPYGGYKMSGFGRD-CGLESLHNYLQVKSVV 405 (414)
Q Consensus 372 ---------~~~~~pfgG~~~sG~g~~-~g~~~~~~~~~~k~i~ 405 (414)
..+.+||||+|.||+|++ +|.+++++|+++|++.
T Consensus 459 ~~~~~~~~~~~~~~pfGG~k~SG~G~~~gg~~~l~~~~~~k~v~ 502 (513)
T cd07128 459 AKESTGHGSPLPQLVHGGPGRAGGGEELGGLRGVKHYMQRTAVQ 502 (513)
T ss_pred ccccccccCCCCCCCCCCcccCCCCcccccHHHHHHhheeeeee
Confidence 235789999999999998 4799999999999874
|
The N-terminal domain of the MaoC dehydratase, a monoamine oxidase regulatory protein. Orthologs of MaoC include PaaZ (Escherichia coli) and PaaN (Pseudomonas putida), which are putative ring-opening enzymes of the aerobic phenylacetic acid (PA) catabolic pathway. The C-terminal domain of MaoC has sequence similarity to enoyl-CoA hydratase. Also included in this CD is a novel Burkholderia xenovorans LB400 ALDH of the aerobic benzoate oxidation (box) pathway. This pathway involves first the synthesis of a CoA thio-esterified aromatic acid, with subsequent dihydroxylation and cleavage steps, yielding the CoA thio-esterified aliphatic aldehyde, 3,4-dehydroadipyl-CoA semialdehyde, which is further converted into its corresponding CoA acid by the Burkholderia LB400 ALDH. |
| >cd07134 ALDH_AlkH-like Pseudomonas putida Aldehyde dehydrogenase AlkH-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.8e-83 Score=639.77 Aligned_cols=400 Identities=29% Similarity=0.435 Sum_probs=371.0
Q ss_pred CHHHHHHHHHhHHHHHHHHHHHcCCChHHHhhccHHHHHHHHHHHHHhhhhhcCc-eeccc---cCccccccccCCcEEE
Q 015031 1 MLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGE-VLKMS---RALQGYTLREPIGVVG 76 (414)
Q Consensus 1 L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~~~~~~~~-~~~~~---~~~~~~~~~~P~Gvv~ 76 (414)
|+++++.|++|+++|++++++|+|||..++...|+..+++.+++++..+.+.... ....+ .+...++.++|+|||+
T Consensus 26 L~~~a~~l~~~~~el~~~~~~e~Gk~~~ea~~~ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~ 105 (433)
T cd07134 26 LKRLKKAILARREEIIAALAADFRKPAAEVDLTEILPVLSEINHAIKHLKKWMKPKRVRTPLLLFGTKSKIRYEPKGVCL 105 (433)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhCCcccCCccccCCCceEEEEecCCEEE
Confidence 5789999999999999999999999999765579999999999998776543222 12111 2456789999999999
Q ss_pred EEcCCCcChHhhHHHHHHHHhcCCeEEEecCCCChhHHHHHHHHHHHcCCCCCeEEEEcCCchhHHHHHHhCCCcCeEEE
Q 015031 77 HIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSF 156 (414)
Q Consensus 77 ~i~p~n~P~~~~~~~~~~ALaaGN~vv~kps~~~~~~~~~l~~~~~~aglp~g~v~~~~~~~~~~~~~l~~~~~~~~v~~ 156 (414)
+|+|||||++..++++++||++||+||+|||+.+|.++..+.+++.++ +|+|+++++++ +.+.+..|++|+ ++.|.|
T Consensus 106 ~i~p~N~P~~~~~~~~~~ALaaGN~Vi~Kps~~~p~~~~~~~~~~~~a-~p~g~v~~v~g-~~~~~~~l~~~~-v~~v~f 182 (433)
T cd07134 106 IISPWNYPFNLAFGPLVSAIAAGNTAILKPSELTPHTSAVIAKIIREA-FDEDEVAVFEG-DAEVAQALLELP-FDHIFF 182 (433)
T ss_pred EEcCCchHHHHHHHHHHHHHHcCCEEEEECCccCHHHHHHHHHHHHHh-CCcCEEEEEeC-ChhHHHHHHhCC-CCEEEE
Confidence 999999999999999999999999999999999999999999999999 99999999998 557888999998 999999
Q ss_pred eCCHHHHHHHHHHHhhCCCCceeeeCCCCCceeecCCCCHHHHHHHHHHHHhcccCCccccCcEEEEeCccHHHHHHHHH
Q 015031 157 TGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLV 236 (414)
Q Consensus 157 tGs~~~~~~i~~~~~~~~~~~~~~e~gG~~~~iV~~dadl~~a~~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f~~~l~ 236 (414)
|||+.+|+.|.+.++ +..+|+++|+||+||+||++|||++.|++.+++++|+++||.|++++++|||++++|+|+++|+
T Consensus 183 tGs~~~g~~i~~~aa-~~~~~~~lelgG~~~~iV~~dAD~~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~v~d~f~~~L~ 261 (433)
T cd07134 183 TGSPAVGKIVMAAAA-KHLASVTLELGGKSPTIVDETADLKKAAKKIAWGKFLNAGQTCIAPDYVFVHESVKDAFVEHLK 261 (433)
T ss_pred ECChHHHHHHHHHHH-hcCCcEEEEccCCCcEEECCCCCHHHHHHHHHHHhhcCcCCcccCCcEEEECHHHHHHHHHHHH
Confidence 999999999999987 7789999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhccccCCC-CCCCCCccccCCHHHHHHHHHHHHHhhhcCCeEeeCCcccCCCCceeeeEEEEeCCCCCccccccccc
Q 015031 237 EKAKAWVVGDP-FDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIGKKGYYIEPTIFTNVTEDMLIAKNEIFG 315 (414)
Q Consensus 237 ~~~~~~~~g~~-~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fg 315 (414)
+++++++.|+| .+.++++||++++.+++++++++++++++|+++++||... .+|+|++|||+.+++++|++++||+||
T Consensus 262 ~~~~~~~~~~~~~~~~~~~gpli~~~~~~~i~~~i~~a~~~ga~~~~gg~~~-~~g~~~~Ptvl~~~~~~~~~~~eE~Fg 340 (433)
T cd07134 262 AEIEKFYGKDAARKASPDLARIVNDRHFDRLKGLLDDAVAKGAKVEFGGQFD-AAQRYIAPTVLTNVTPDMKIMQEEIFG 340 (433)
T ss_pred HHHHHHcCCCCCcCCCCccCCcCCHHHHHHHHHHHHHHHhCCCEEEeCCCcC-CCCCEEeeEEEeCCCCccHHHhccccC
Confidence 99999988887 8889999999999999999999999999999999999764 368999999999999999999999999
Q ss_pred ceEEEeeeCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHHhccceeEEEECCcCC--CCCCCCccCCCCCCCCCcchHH
Q 015031 316 PVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSIRAGIIWINCYFA--FDSDCPYGGYKMSGFGRDCGLE 393 (414)
Q Consensus 316 Pvl~v~~~~~~~eai~~~n~~~~gl~~sv~s~d~~~~~~~~~~l~~g~v~vN~~~~--~~~~~pfgG~~~sG~g~~~g~~ 393 (414)
||++|++|+|.||||+++|+++|||++||||+|.+.++++++++++|.|+||+.+. ..+.+||||+|.||+|+++|.+
T Consensus 341 Pvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~~~PfGG~k~SG~G~~~g~~ 420 (433)
T cd07134 341 PVLPIITYEDLDEVIEYINAKPKPLALYVFSKDKANVNKVLARTSSGGVVVNDVVLHFLNPNLPFGGVNNSGIGSYHGVY 420 (433)
T ss_pred ceEEEEEeCCHHHHHHHHhCCCCCcEEEEECCCHHHHHHHHHhCCcceEEECCcccccCCCCCCCCCcCcccCCCcCcHH
Confidence 99999999999999999999999999999999999999999999999999998764 3467899999999999999999
Q ss_pred HHHhhhcccEEE
Q 015031 394 SLHNYLQVKSVV 405 (414)
Q Consensus 394 ~~~~~~~~k~i~ 405 (414)
++++||+.|+++
T Consensus 421 ~l~~~~~~k~i~ 432 (433)
T cd07134 421 GFKAFSHERAVL 432 (433)
T ss_pred HHHHhcccceee
Confidence 999999999875
|
Aldehyde dehydrogenase AlkH (locus name P12693, EC=1.2.1.3) of the alkBFGHJKL operon that allows Pseudomonas putida to metabolize alkanes and the aldehyde dehydrogenase AldX of Bacillus subtilis (locus P46329, EC=1.2.1.3), and similar sequences, are present in this CD. |
| >cd07149 ALDH_y4uC Uncharacterized ALDH (y4uC) with similarity to Tortula ruralis aldehyde dehydrogenase ALDH21A1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.6e-82 Score=642.90 Aligned_cols=398 Identities=40% Similarity=0.657 Sum_probs=371.7
Q ss_pred CHHHHHHHHHhHHHHHHHHHHHcCCChHHHhhccHHHHHHHHHHHHHhhhhhcCceeccc-----cCccccccccCCcEE
Q 015031 1 MLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMS-----RALQGYTLREPIGVV 75 (414)
Q Consensus 1 L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~P~Gvv 75 (414)
|+++++.|++++++|++++++|+|||..++ ..|+..+++.++++++.+++..++..+.. .+...+.+++|+|||
T Consensus 49 L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a-~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv 127 (453)
T cd07149 49 LERAAQLLEERREEFARTIALEAGKPIKDA-RKEVDRAIETLRLSAEEAKRLAGETIPFDASPGGEGRIGFTIREPIGVV 127 (453)
T ss_pred HHHHHHHHHHhHHHHHHHHHHHhCcCHHHH-HHHHHHHHHHHHHHHHHHHHhcCccccccccCCCCCeeEEEEeecceEE
Confidence 578999999999999999999999999976 46999999999999887766544332221 123357789999999
Q ss_pred EEEcCCCcChHhhHHHHHHHHhcCCeEEEecCCCChhHHHHHHHHHHHcCCCCCeEEEEcCCchhHHHHHHhCCCcCeEE
Q 015031 76 GHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVS 155 (414)
Q Consensus 76 ~~i~p~n~P~~~~~~~~~~ALaaGN~vv~kps~~~~~~~~~l~~~~~~aglp~g~v~~~~~~~~~~~~~l~~~~~~~~v~ 155 (414)
++|+|||||+...++++++||++||+||+|||+.+|.++..+.+++.++|+|+|+++++++++.+.+..|+.|+++|.|.
T Consensus 128 ~~i~p~N~P~~~~~~~~~~ALaaGN~VI~Kps~~~p~~~~~l~~~l~~ag~P~gvv~~v~g~~~~~~~~l~~~~~v~~V~ 207 (453)
T cd07149 128 AAITPFNFPLNLVAHKVGPAIAAGNAVVLKPASQTPLSALKLAELLLEAGLPKGALNVVTGSGETVGDALVTDPRVRMIS 207 (453)
T ss_pred EEECCCCChHHHHHHHHHHHHHcCCEEEEECCCcchHHHHHHHHHHHHcCcCccceEEeecCchHHHHHHhcCCCCCEEE
Confidence 99999999999999999999999999999999999999999999999999999999999997767789999999999999
Q ss_pred EeCCHHHHHHHHHHHhhCCCCceeeeCCCCCceeecCCCCHHHHHHHHHHHHhcccCCccccCcEEEEeCccHHHHHHHH
Q 015031 156 FTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKL 235 (414)
Q Consensus 156 ~tGs~~~~~~i~~~~~~~~~~~~~~e~gG~~~~iV~~dadl~~a~~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f~~~l 235 (414)
||||+++++.|.+.++ .+|+++|+|||||+||++|+|++.|++.+++++|+++||.|+++++||||++++|+|+++|
T Consensus 208 ftGs~~~g~~i~~~a~---~~~~~lelGGk~p~iV~~dadl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~L 284 (453)
T cd07149 208 FTGSPAVGEAIARKAG---LKKVTLELGSNAAVIVDADADLEKAVERCVSGAFANAGQVCISVQRIFVHEDIYDEFLERF 284 (453)
T ss_pred EECCHHHHHHHHHHcC---CCceeeecCCCceEEECCCCCHHHHHHHHHHHHHHhcCCCCCCCceEEEcHhHHHHHHHHH
Confidence 9999999999988853 7899999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhccccCCCCCCCCCccccCCHHHHHHHHHHHHHhhhcCCeEeeCCcccCCCCceeeeEEEEeCCCCCccccccccc
Q 015031 236 VEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIGKKGYYIEPTIFTNVTEDMLIAKNEIFG 315 (414)
Q Consensus 236 ~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fg 315 (414)
+++++++++|+|.++++++||++++.+++++++++++++.+|+++++||.. .|+|++|||+.+++++|+++++|+||
T Consensus 285 ~~~~~~~~~g~p~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ga~v~~gg~~---~g~~~~Ptvl~~~~~~~~~~~~E~fg 361 (453)
T cd07149 285 VAATKKLVVGDPLDEDTDVGPMISEAEAERIEEWVEEAVEGGARLLTGGKR---DGAILEPTVLTDVPPDMKVVCEEVFA 361 (453)
T ss_pred HHHHHhCCcCCCCCCCCccccccCHHHHHHHHHHHHHHHHCCCEEEeCCCC---CCeEEcCEEEeCCCCCCHHHhCCCCC
Confidence 999999999999999999999999999999999999999999999999875 58999999999999999999999999
Q ss_pred ceEEEeeeCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHHhccceeEEEECCcCCC-CCCCCccCCCCCCCCCcchHHH
Q 015031 316 PVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSIRAGIIWINCYFAF-DSDCPYGGYKMSGFGRDCGLES 394 (414)
Q Consensus 316 Pvl~v~~~~~~~eai~~~n~~~~gl~~sv~s~d~~~~~~~~~~l~~g~v~vN~~~~~-~~~~pfgG~~~sG~g~~~g~~~ 394 (414)
||++|++|+|+||||+++|++++||++||||+|.+.+.++++++++|+|+||+.... .+.+||||+|.||+|+++|.+|
T Consensus 362 Pvl~v~~~~~~~eai~~~n~~~~gLt~~v~t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~~pfGG~~~SG~G~~~g~~~ 441 (453)
T cd07149 362 PVVSLNPFDTLDEAIAMANDSPYGLQAGVFTNDLQKALKAARELEVGGVMINDSSTFRVDHMPYGGVKESGTGREGPRYA 441 (453)
T ss_pred ceEEEEEeCCHHHHHHHHhCCCcCceEEEEcCCHHHHHHHHHHcCcCeEEECCCCCCCCCCCCcCCccccccCCCChHHH
Confidence 999999999999999999999999999999999999999999999999999987653 4678999999999999999999
Q ss_pred HHhhhcccEEE
Q 015031 395 LHNYLQVKSVV 405 (414)
Q Consensus 395 ~~~~~~~k~i~ 405 (414)
+++|++.|+++
T Consensus 442 ~~~~~~~k~~~ 452 (453)
T cd07149 442 IEEMTEIKLVC 452 (453)
T ss_pred HHHhhceeEEe
Confidence 99999999885
|
Uncharacterized aldehyde dehydrogenase (ORF name y4uC) with sequence similarity to the moss Tortula ruralis aldehyde dehydrogenase ALDH21A1 (RNP123) believed to play an important role in the detoxification of aldehydes generated in response to desiccation- and salinity-stress, and similar sequences are included in this CD. |
| >TIGR02278 PaaN-DH phenylacetic acid degradation protein paaN | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.9e-82 Score=660.21 Aligned_cols=400 Identities=24% Similarity=0.309 Sum_probs=361.3
Q ss_pred CHHHHHHHHHhHHHHHHHHHHHcCCChHHHhhccHHHHHHHHHHHHHhhhhhc--------Cceeccc-c-Ccccccccc
Q 015031 1 MLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIH--------GEVLKMS-R-ALQGYTLRE 70 (414)
Q Consensus 1 L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~~~~~~--------~~~~~~~-~-~~~~~~~~~ 70 (414)
|+++++.|++|+++|++ +++|+|||+.++ ..|+..+++.+++++..+++.. ++..+.. . +...++.++
T Consensus 65 L~~~a~~l~~~~~ela~-~~~e~GK~~~~a-~~ev~~~~~~~~~~a~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~ 142 (663)
T TIGR02278 65 LKALAQYLSERKEALYA-LAATTGATRRDN-WVDIDGGIGTLFTYSSLGRRELPDANLIPEDEFEPLSKDGSFQGRHILT 142 (663)
T ss_pred HHHHHHHHHHHHHHHHH-HHHHcCCCHHHH-HHHHHHHHHHHHHHHHhhhhhccccccccCCceeccCCCCccceEEEEE
Confidence 67999999999999999 599999999975 5799999999999998876522 2222211 1 224678999
Q ss_pred CC-cEEEEEcCCCcChHhhHHHHHHHHhcCCeEEEecCCCChhHHHHHHHHHHHcC-CCCCeEEEEcCCchhHHHHHHhC
Q 015031 71 PI-GVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAG-VPDGVLNVVPGFGPTAGAAIASH 148 (414)
Q Consensus 71 P~-Gvv~~i~p~n~P~~~~~~~~~~ALaaGN~vv~kps~~~~~~~~~l~~~~~~ag-lp~g~v~~~~~~~~~~~~~l~~~ 148 (414)
|+ |||++|+|||||+...++++++||++||+||+|||+.+|+++..+.+++.++| +|+|++|+++++. +..+..+
T Consensus 143 P~~Gvv~~I~pwN~P~~~~~~~~~~ALaaGN~Vv~KPs~~tp~~~~~l~~~~~~aG~lP~gv~~~v~g~~---~~~~~~~ 219 (663)
T TIGR02278 143 PKGGVAVQINAFNFPVWGLLEKFAPAFLAGVPTLAKPATPTAYVAEALVRTMVESGLLPEGSLQLICGSA---GDLLDHL 219 (663)
T ss_pred eCCceEEEEcCCchHHHHHHHHHHHHHHcCCEEEEECCCcchHHHHHHHHHHHHhCCCCCCcEEEEeCCh---HHHHhcC
Confidence 98 99999999999999999999999999999999999999999999999999999 9999999999853 2333334
Q ss_pred CCcCeEEEeCCHHHHHHHHHHHh-hCCCCceeeeCCCCCceeecCCCC-----HHHHHHHHHHHHhcccCCccccCcEEE
Q 015031 149 MDIDKVSFTGSTDVGRQVMQAAA-TSNLKPVSLELGGKSPLLIFDDVD-----VNTAADMALLGILFNKGEICVASSRVY 222 (414)
Q Consensus 149 ~~~~~v~~tGs~~~~~~i~~~~~-~~~~~~~~~e~gG~~~~iV~~dad-----l~~a~~~i~~~~~~~~Gq~C~a~~~v~ 222 (414)
+++|.|.||||+++|+.|.+.++ .++++|+++|+|||||+||++||| ++.|++.+++++|.|+||.|++++|||
T Consensus 220 ~~~~~V~FTGS~~~G~~i~~~aaaa~~~~~~~lELGGk~p~IV~~dAd~~~~dl~~aa~~i~~~~f~~sGQ~C~a~~rv~ 299 (663)
T TIGR02278 220 DHRDVVAFTGSAATADRLRAHPNVLERGIRFNAEADSLNAAILGEDATPDEPEFDLFAQEIVRELTIKAGQKCTAIRRVI 299 (663)
T ss_pred CCCCEEEEECCHHHHHHHHHhHhHHhcCceEEEEcCCCCeEEEcCCCCccchhHHHHHHHHHHHHHhcCCCCccCCceEE
Confidence 77899999999999999998742 368899999999999999999999 999999999999999999999999999
Q ss_pred EeCccHHHHHHHHHHHHhccccCCCCCCCCCccccCCHHHHHHHHHHHHHhhhcCCeEeeCCcccCCCCceeeeEEEEeC
Q 015031 223 VQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIGKKGYYIEPTIFTNV 302 (414)
Q Consensus 223 V~~~~~~~f~~~l~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~~~g~~~~Ptvl~~~ 302 (414)
||++++|+|+++|+++++++++|+|.++++++||++++.++++++++|++++++|+++++||.... +|+|++|||+.++
T Consensus 300 V~~~i~d~f~~~l~~~~~~l~vG~p~~~~t~~Gpli~~~~~~~i~~~i~~a~~~Ga~vl~GG~~~~-~g~~~~PTvl~~~ 378 (663)
T TIGR02278 300 VPKALLEAVLKALQARLAKVVLGDPREEGVDMGPLVSLEQRADVEAAVAALLAAGAEVRLGGPGRL-DGAFFPPTLLLAE 378 (663)
T ss_pred EeHHHHHHHHHHHHHHHHhccCCCccccCCCcCCCCCHHHHHHHHHHHHHHHHCCCEEEECCCcCC-CCeeEccEEEeeC
Confidence 999999999999999999999999999999999999999999999999999999999999997643 6899999999999
Q ss_pred CCCC-cccccccccceEEEeeeCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHHhcc--ceeEEEE-CCcC------C-
Q 015031 303 TEDM-LIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSI--RAGIIWI-NCYF------A- 371 (414)
Q Consensus 303 ~~~~-~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~sv~s~d~~~~~~~~~~l--~~g~v~v-N~~~------~- 371 (414)
+++| .+++||+||||++|++|+|.||||+++|+++|||++||||+|.+.++++++++ ++|.|+| |+.. .
T Consensus 379 ~~~~~~i~~eE~FGPVl~V~~~~~~~eai~~aN~~~~gL~a~vft~d~~~~~~~~~~l~~~~G~v~InN~~~~~~~~~~~ 458 (663)
T TIGR02278 379 DPWAGAVHATEAFGPVATFFPYGDRAEAARLAARGGGSLVATLATSDPEEARQFILGLAPYHGRLHILNRDDAAESTGHG 458 (663)
T ss_pred CcchhhHHhccccCCeEEEEeeCCHHHHHHHHHcCCCCceEEEEeCCHHHHHHHHHHHHhhCCEEEECCCcccccccCCC
Confidence 8876 79999999999999999999999999999999999999999999999999999 7999999 6421 1
Q ss_pred -CCCCCCccCCCCCCCCCc-chHHHHHhhhcccEEEE
Q 015031 372 -FDSDCPYGGYKMSGFGRD-CGLESLHNYLQVKSVVT 406 (414)
Q Consensus 372 -~~~~~pfgG~~~sG~g~~-~g~~~~~~~~~~k~i~~ 406 (414)
..+.+||||+|.||+|++ +|.+++++|+++|+++.
T Consensus 459 ~~~~~~pfGG~k~SG~G~~~g~~~~l~~f~~~k~v~~ 495 (663)
T TIGR02278 459 SPLPRLLHGGPGRAGGGEELGGLRSVKHYMQRTAIQG 495 (663)
T ss_pred CCCCCCCCCCCccCcCCCccchHHHHHHhceeEEEEc
Confidence 235689999999999999 46899999999999865
|
This family includes paaN genes from Pseudomonas, Sinorhizobium, Rhodopseudomonas, Escherichia, Deinococcus and Corynebacterium. Another homology family (TIGR02288) includes several other species. |
| >cd07082 ALDH_F11_NP-GAPDH NADP+-dependent non-phosphorylating glyceraldehyde 3-phosphate dehydrogenase and ALDH family 11 | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.8e-82 Score=641.23 Aligned_cols=400 Identities=36% Similarity=0.536 Sum_probs=375.4
Q ss_pred CHHHHHHHHHhHHHHHHHHHHHcCCChHHHhhccHHHHHHHHHHHHHhhhhhcCceeccc-----cCccccccccCCcEE
Q 015031 1 MLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMS-----RALQGYTLREPIGVV 75 (414)
Q Consensus 1 L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~P~Gvv 75 (414)
|+++++.|++++++|++++++|+|||..++ ..|+..+++.++++++..++..+...+.. .+...+.+++|+|||
T Consensus 67 L~~~a~~l~~~~~el~~~~~~e~Gk~~~~a-~~ev~~~~~~l~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~P~GVv 145 (473)
T cd07082 67 LHKFADLLKENKEEVANLLMWEIGKTLKDA-LKEVDRTIDYIRDTIEELKRLDGDSLPGDWFPGTKGKIAQVRREPLGVV 145 (473)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHcCCcHHHH-HHHHHHHHHHHHHHHHHHHHhcCCcccccccccCCCceeEEEEecceEE
Confidence 578999999999999999999999999975 46999999999999988876654433221 345567899999999
Q ss_pred EEEcCCCcChHhhHHHHHHHHhcCCeEEEecCCCChhHHHHHHHHHHHcCCCCCeEEEEcCCchhHHHHHHhCCCcCeEE
Q 015031 76 GHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVS 155 (414)
Q Consensus 76 ~~i~p~n~P~~~~~~~~~~ALaaGN~vv~kps~~~~~~~~~l~~~~~~aglp~g~v~~~~~~~~~~~~~l~~~~~~~~v~ 155 (414)
++|+|||||+...++++++||++||+||+|||+.+|.++..+.+++.++|+|+|+++++++++.+.++.|..|+++|.|.
T Consensus 146 ~~I~p~N~P~~~~~~~i~~AL~aGN~vilKps~~~~~~~~~l~~~l~~aglp~~~~~vv~g~~~~~~~~l~~~~~v~~V~ 225 (473)
T cd07082 146 LAIGPFNYPLNLTVSKLIPALIMGNTVVFKPATQGVLLGIPLAEAFHDAGFPKGVVNVVTGRGREIGDPLVTHGRIDVIS 225 (473)
T ss_pred EEECCcCcHHHHHHHHHHHHHHcCCEEEEECCCCCcHHHHHHHHHHHHcCCCccceEEEecCcHHHHHHHhcCCCCCEEE
Confidence 99999999999999999999999999999999999999999999999999999999999997777899999999999999
Q ss_pred EeCCHHHHHHHHHHHhhCCCCceeeeCCCCCceeecCCCCHHHHHHHHHHHHhcccCCccccCcEEEEeCccHHHHHHHH
Q 015031 156 FTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKL 235 (414)
Q Consensus 156 ~tGs~~~~~~i~~~~~~~~~~~~~~e~gG~~~~iV~~dadl~~a~~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f~~~l 235 (414)
||||+++++.|.+.++ .+|+++|+||+||+||++|||++.|++.+++++|.++||.|+++++||||++++|+|+++|
T Consensus 226 ftGs~~~g~~i~~~a~---~~~~~lelgg~n~~iV~~dadl~~aa~~i~~~~~~~~GQ~C~a~~~v~v~~~i~d~f~~~l 302 (473)
T cd07082 226 FTGSTEVGNRLKKQHP---MKRLVLELGGKDPAIVLPDADLELAAKEIVKGALSYSGQRCTAIKRVLVHESVADELVELL 302 (473)
T ss_pred EECcHHHHHHHHHHhC---CCcEEEEcCCCCeEEECCCCCHHHHHHHHHHHHHHhCCCcCCCCeEEEEcHHHHHHHHHHH
Confidence 9999999999998864 7999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhccccCCCCCCCCCccccCCHHHHHHHHHHHHHhhhcCCeEeeCCcccCCCCceeeeEEEEeCCCCCccccccccc
Q 015031 236 VEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIGKKGYYIEPTIFTNVTEDMLIAKNEIFG 315 (414)
Q Consensus 236 ~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fg 315 (414)
.++++++++|+|.++++++||+++..++++++++++++..+|+++++||... .|+|+.|||+.+++++|++++||+||
T Consensus 303 ~~~~~~~~~g~~~~~~~~~gp~i~~~~~~~~~~~~~~a~~~ga~~~~gg~~~--~g~~~~Ptvl~~~~~~~~~~~eE~fg 380 (473)
T cd07082 303 KEEVAKLKVGMPWDNGVDITPLIDPKSADFVEGLIDDAVAKGATVLNGGGRE--GGNLIYPTLLDPVTPDMRLAWEEPFG 380 (473)
T ss_pred HHHHhcCCCCCCCCCCCCcCCCCCHHHHHHHHHHHHHHHHCCCEEEeCCccC--CCeEEeeEEEecCCCCCHHHhCcCcC
Confidence 9999999999999999999999999999999999999999999999999763 48999999999999999999999999
Q ss_pred ceEEEeeeCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHHhccceeEEEECCcCCCC-CCCCccCCCCCCCCCcchHHH
Q 015031 316 PVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSIRAGIIWINCYFAFD-SDCPYGGYKMSGFGRDCGLES 394 (414)
Q Consensus 316 Pvl~v~~~~~~~eai~~~n~~~~gl~~sv~s~d~~~~~~~~~~l~~g~v~vN~~~~~~-~~~pfgG~~~sG~g~~~g~~~ 394 (414)
||++|++|+|++|||+++|+++|||++||||+|.+.+.++++++++|+|+||++.... +.+||||+|.||+|+++|.+|
T Consensus 381 Pvl~v~~~~~~~eai~~~n~~~~gL~~~v~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~~pfGG~k~SG~g~~~g~~~ 460 (473)
T cd07082 381 PVLPIIRVNDIEEAIELANKSNYGLQASIFTKDINKARKLADALEVGTVNINSKCQRGPDHFPFLGRKDSGIGTQGIGDA 460 (473)
T ss_pred ceEEEEEeCCHHHHHHHHhCCCCCceEEEEeCCHHHHHHHHHhCCcceEEECCCCCCCCCCCCCCcccccccCCCChHHH
Confidence 9999999999999999999999999999999999999999999999999999977533 568999999999999999999
Q ss_pred HHhhhcccEEEE
Q 015031 395 LHNYLQVKSVVT 406 (414)
Q Consensus 395 ~~~~~~~k~i~~ 406 (414)
+++|++.|++++
T Consensus 461 l~~~~~~k~i~~ 472 (473)
T cd07082 461 LRSMTRRKGIVI 472 (473)
T ss_pred HHHhhceeEEEE
Confidence 999999999875
|
NADP+-dependent non-phosphorylating glyceraldehyde 3-phosphate dehydrogenase (NP-GAPDH, EC=1.2.1.9) catalyzes the irreversible oxidation of glyceraldehyde 3-phosphate to 3-phosphoglycerate generating NADPH for biosynthetic reactions. This CD also includes the Arabidopsis thaliana osmotic-stress-inducible ALDH family 11, ALDH11A3 and similar sequences. In autotrophic eukaryotes, NP-GAPDH generates NADPH for biosynthetic processes from photosynthetic glyceraldehyde-3-phosphate exported from the chloroplast and catalyzes one of the classic glycolytic bypass reactions unique to plants. |
| >cd07132 ALDH_F3AB Aldehyde dehydrogenase family 3 members A1, A2, and B1 and related proteins | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.9e-82 Score=635.06 Aligned_cols=397 Identities=27% Similarity=0.414 Sum_probs=363.1
Q ss_pred CHHHHHHHHHhHHHHHHHHHHHcCCChHHHhhccHHHHHHHHHHHHHhhhhhcCceec-c---ccCccccccccCCcEEE
Q 015031 1 MLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLK-M---SRALQGYTLREPIGVVG 76 (414)
Q Consensus 1 L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~~~~~~~~~~~-~---~~~~~~~~~~~P~Gvv~ 76 (414)
|+++++.|++|+++|++++++|+|||+.++...|+..+++.++++++.+++....... . ..+...++.++|+|||+
T Consensus 26 L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~~ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~ 105 (443)
T cd07132 26 LEALLRMLEENEDEIVEALAKDLRKPKFEAVLSEILLVKNEIKYAISNLPEWMKPEPVKKNLATLLDDVYIYKEPLGVVL 105 (443)
T ss_pred HHHHHHHHHHhHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhCCccCCCccccCCCceEEEEecccEEE
Confidence 6899999999999999999999999999866679999999999998877655332111 1 12345788999999999
Q ss_pred EEcCCCcChHhhHHHHHHHHhcCCeEEEecCCCChhHHHHHHHHHHHcCCCCCeEEEEcCCchhHHHHHHhCCCcCeEEE
Q 015031 77 HIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSF 156 (414)
Q Consensus 77 ~i~p~n~P~~~~~~~~~~ALaaGN~vv~kps~~~~~~~~~l~~~~~~aglp~g~v~~~~~~~~~~~~~l~~~~~~~~v~~ 156 (414)
+|+|||||+...++++++||++||+||+|||+.+|.++..+.+++.++ +|+|++|++++++. .+..++. +++|.|.|
T Consensus 106 ~I~p~N~P~~~~~~~~~~ALaaGN~VvlKps~~~~~~~~~l~~~~~~~-lp~gv~~vv~g~~~-~~~~l~~-~~vd~V~f 182 (443)
T cd07132 106 IIGAWNYPLQLTLVPLVGAIAAGNCVVIKPSEVSPATAKLLAELIPKY-LDKECYPVVLGGVE-ETTELLK-QRFDYIFY 182 (443)
T ss_pred EEcCCchhHHHHHHHHHHHHHcCCEEEEECCccCHHHHHHHHHHHHHh-CCcCeEEEEeCCHH-HHHHHHh-CCCCEEEE
Confidence 999999999999999999999999999999999999999999999986 99999999999544 4556665 58999999
Q ss_pred eCCHHHHHHHHHHHhhCCCCceeeeCCCCCceeecCCCCHHHHHHHHHHHHhcccCCccccCcEEEEeCccHHHHHHHHH
Q 015031 157 TGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLV 236 (414)
Q Consensus 157 tGs~~~~~~i~~~~~~~~~~~~~~e~gG~~~~iV~~dadl~~a~~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f~~~l~ 236 (414)
|||+.+|+.|.+.++ ++++|+++|+||+||+||++|||++.|++.+++++|.|+||.|++++++|||++++|+|+++|+
T Consensus 183 TGs~~~g~~i~~~a~-~~~~~~~lElgG~~p~iV~~dADl~~aa~~i~~~~f~~~GQ~C~a~~rv~V~~~i~d~f~~~l~ 261 (443)
T cd07132 183 TGSTSVGKIVMQAAA-KHLTPVTLELGGKSPCYVDKSCDIDVAARRIAWGKFINAGQTCIAPDYVLCTPEVQEKFVEALK 261 (443)
T ss_pred ECChHHHHHHHHHHH-hhCCceEEEcCCCCceEEcCCCCHHHHHHHHHHHHHhcCCCceeCCcEEEEcHHHHHHHHHHHH
Confidence 999999999999887 7899999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhccccCCCCCCCCCccccCCHHHHHHHHHHHHHhhhcCCeEeeCCcccCCCCceeeeEEEEeCCCCCcccccccccc
Q 015031 237 EKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIGKKGYYIEPTIFTNVTEDMLIAKNEIFGP 316 (414)
Q Consensus 237 ~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgP 316 (414)
+++++++.|+| ++++++||++++.+++++++++++ +++++||..+ .+|+|++|||+.+++++|++++||+|||
T Consensus 262 ~~~~~~~~g~~-~~~~~~gpli~~~~~~~v~~~i~~-----a~~~~gg~~~-~~~~~~~Ptvl~~v~~~~~~~~eE~FgP 334 (443)
T cd07132 262 KTLKEFYGEDP-KESPDYGRIINDRHFQRLKKLLSG-----GKVAIGGQTD-EKERYIAPTVLTDVKPSDPVMQEEIFGP 334 (443)
T ss_pred HHHHHhcCCCC-CcccccCCcCCHHHHHHHHHHHhC-----CEEEeCCccC-CCCCEEeeEEEeCCCCCChHHhccccCc
Confidence 99999998888 688999999999999999999874 4889998764 3689999999999999999999999999
Q ss_pred eEEEeeeCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHHhccceeEEEECCcCCC--CCCCCccCCCCCCCCCcchHHH
Q 015031 317 VMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSIRAGIIWINCYFAF--DSDCPYGGYKMSGFGRDCGLES 394 (414)
Q Consensus 317 vl~v~~~~~~~eai~~~n~~~~gl~~sv~s~d~~~~~~~~~~l~~g~v~vN~~~~~--~~~~pfgG~~~sG~g~~~g~~~ 394 (414)
|++|++|+|+||||+++|+++|||++||||+|.+.+.++++++++|.|+||++... .+.+||||+|.||+|+++|.+|
T Consensus 335 vl~v~~~~~~~eai~~an~~~~gL~a~i~t~d~~~~~~~~~~l~~G~v~IN~~~~~~~~~~~PfGG~k~SG~G~~~g~~~ 414 (443)
T cd07132 335 ILPIVTVNNLDEAIEFINSREKPLALYVFSNNKKVINKILSNTSSGGVCVNDTIMHYTLDSLPFGGVGNSGMGAYHGKYS 414 (443)
T ss_pred eeEEEEeCCHHHHHHHHhcCCCCcEEEEECCCHHHHHHHHHhCCcceEEECCcccccCCCCCCCCCCCcccCCCcccHHH
Confidence 99999999999999999999999999999999999999999999999999987642 3678999999999999999999
Q ss_pred HHhhhcccEEEEeC
Q 015031 395 LHNYLQVKSVVTPI 408 (414)
Q Consensus 395 ~~~~~~~k~i~~~~ 408 (414)
+++|+++|++++++
T Consensus 415 l~~~~~~k~v~~~~ 428 (443)
T cd07132 415 FDTFSHKRSCLVKS 428 (443)
T ss_pred HHHhccccEEEEcc
Confidence 99999999998764
|
NAD(P)+-dependent, aldehyde dehydrogenase, family 3 members A1 and B1 (ALDH3A1, ALDH3B1, EC=1.2.1.5) and fatty aldehyde dehydrogenase, family 3 member A2 (ALDH3A2, EC=1.2.1.3), and similar sequences are included in this CD. Human ALDH3A1 is a homodimer with a critical role in cellular defense against oxidative stress; it catalyzes the oxidation of various cellular membrane lipid-derived aldehydes. Corneal crystalline ALDH3A1 protects the cornea and underlying lens against UV-induced oxidative stress. Human ALDH3A2, a microsomal homodimer, catalyzes the oxidation of long-chain aliphatic aldehydes to fatty acids. Human ALDH3B1 is highly expressed in the kidney and liver and catalyzes the oxidation of various medium- and long-chain saturated and unsaturated aliphatic aldehydes. |
| >PRK11903 aldehyde dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-81 Score=640.49 Aligned_cols=401 Identities=24% Similarity=0.348 Sum_probs=358.1
Q ss_pred CHHHHHHHHHhHHHHHHHHHHHcCCChHHHhhccHHHHHHHHHHHHHhhhhhcCceeccc---------cCccccccccC
Q 015031 1 MLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMS---------RALQGYTLREP 71 (414)
Q Consensus 1 L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~P 71 (414)
|+++++.|++++++|++++++|+|||..++ ..|+..+++.+++++.++....+...... .....+..++|
T Consensus 69 L~~~a~~l~~~~~ela~~~~~e~Gkp~~~a-~~ev~~~i~~l~~~a~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P 147 (521)
T PRK11903 69 LAAIVKVLQANRDAYYDIATANSGTTRNDS-AVDIDGGIFTLGYYAKLGAALGDARLLRDGEAVQLGKDPAFQGQHVLVP 147 (521)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCCHHHH-HHHHHHHHHHHHHHHHHHHHcCCCcccCCCccccccccccccceEEEec
Confidence 578999999999999999999999999975 57999999999999998866543211100 11224567889
Q ss_pred -CcEEEEEcCCCcChHhhHHHHHHHHhcCCeEEEecCCCChhHHHHHHHHHHHcC-CCCCeEEEEcCCchhHHHHHHhCC
Q 015031 72 -IGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAG-VPDGVLNVVPGFGPTAGAAIASHM 149 (414)
Q Consensus 72 -~Gvv~~i~p~n~P~~~~~~~~~~ALaaGN~vv~kps~~~~~~~~~l~~~~~~ag-lp~g~v~~~~~~~~~~~~~l~~~~ 149 (414)
+|||++|+|||||+...++++++||++||+||+|||+.+|.++..+.+++.++| +|+|++|+++|++.++...| +
T Consensus 148 ~~GVv~~I~pwN~P~~~~~~~~~~ALaaGN~VV~KPs~~tp~~~~~l~~~~~~ag~lP~gv~~~v~g~~~~~~~~l---~ 224 (521)
T PRK11903 148 TRGVALFINAFNFPAWGLWEKAAPALLAGVPVIVKPATATAWLTQRMVKDVVAAGILPAGALSVVCGSSAGLLDHL---Q 224 (521)
T ss_pred CcceEEEECCcchHHHHHHHHHHHHHHcCCeEEEEcCCcChHHHHHHHHHHHHhCCCCcCceEEeeCCchHHHhcc---c
Confidence 699999999999999999999999999999999999999999999999999999 99999999998665554433 7
Q ss_pred CcCeEEEeCCHHHHHHHHHHHh-hCCCCceeeeCCCCCceeecCCCC-----HHHHHHHHHHHHhcccCCccccCcEEEE
Q 015031 150 DIDKVSFTGSTDVGRQVMQAAA-TSNLKPVSLELGGKSPLLIFDDVD-----VNTAADMALLGILFNKGEICVASSRVYV 223 (414)
Q Consensus 150 ~~~~v~~tGs~~~~~~i~~~~~-~~~~~~~~~e~gG~~~~iV~~dad-----l~~a~~~i~~~~~~~~Gq~C~a~~~v~V 223 (414)
++|.|.||||+++|+.|.+.++ ..+++|+++|+|||||+||++||| ++.+++.+++++|.|+||.|++++|+||
T Consensus 225 ~v~~v~fTGS~~~G~~v~~~aa~~~~~~~~~lElGGknp~IV~~dAd~~~~~~~~aa~~i~~~~f~~sGQ~C~a~~rv~V 304 (521)
T PRK11903 225 PFDVVSFTGSAETAAVLRSHPAVVQRSVRVNVEADSLNSALLGPDAAPGSEAFDLFVKEVVREMTVKSGQKCTAIRRIFV 304 (521)
T ss_pred CCCEEEEECCHHHHHHHHhhhhhhccCceeEeeccccCceEEccCCcccchhHHHHHHHHHHHHHhccCCCccCCeEEEE
Confidence 8999999999999999998642 367899999999999999999999 5999999999999999999999999999
Q ss_pred eCccHHHHHHHHHHHHhccccCCCCCCCCCccccCCHHHHHHHHHHHHHhhhcCCeEeeCCccc------CCCCceeeeE
Q 015031 224 QEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPI------GKKGYYIEPT 297 (414)
Q Consensus 224 ~~~~~~~f~~~l~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ga~v~~gg~~~------~~~g~~~~Pt 297 (414)
|+++||+|+++|+++++++++|+|.++++++||++++.+++++.++++.. .+|+++++||... .++|+|++||
T Consensus 305 ~~~i~d~f~~~L~~~~~~l~~G~p~~~~~~~Gpli~~~~~~~v~~~i~~~-~~ga~vl~gg~~~~~~~~~~~~g~~~~PT 383 (521)
T PRK11903 305 PEALYDAVAEALAARLAKTTVGNPRNDGVRMGPLVSRAQLAAVRAGLAAL-RAQAEVLFDGGGFALVDADPAVAACVGPT 383 (521)
T ss_pred ehhHHHHHHHHHHHHHHhccCCCCCCCcCccCCCCCHHHHHHHHHHHHHH-hcCCEEEECCccCCCCCCCCCCCeEEcCE
Confidence 99999999999999999999999999999999999999999999999864 5799999999652 1358999999
Q ss_pred EEEeCCC--CCcccccccccceEEEeeeCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHHhcc--ceeEEEECCcCC--
Q 015031 298 IFTNVTE--DMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSI--RAGIIWINCYFA-- 371 (414)
Q Consensus 298 vl~~~~~--~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~sv~s~d~~~~~~~~~~l--~~g~v~vN~~~~-- 371 (414)
|+.++++ ++.+++||+||||++|++|+|.||||+++|+++|||++||||+|.+.++++++++ ++|+|+||+...
T Consensus 384 vl~~~~~~~~~~i~~eE~FGPvl~V~~~~~~~eai~~~N~~~~gL~asvft~d~~~~~~~~~~l~~~~G~V~iN~~~~~~ 463 (521)
T PRK11903 384 LLGASDPDAATAVHDVEVFGPVATLLPYRDAAHALALARRGQGSLVASVYSDDAAFLAAAALELADSHGRVHVISPDVAA 463 (521)
T ss_pred EEeccCCCccchHHhCcccCCeEEEEeeCCHHHHHHHHhcCCCCceEEEEeCCHHHHHHHHHHHHHhCCEEEEcCccccc
Confidence 9987654 4789999999999999999999999999999999999999999999999999999 899999997532
Q ss_pred -------CCCCCCccCCCCCCCCCcc-hHHHHHhhhcccEEEE
Q 015031 372 -------FDSDCPYGGYKMSGFGRDC-GLESLHNYLQVKSVVT 406 (414)
Q Consensus 372 -------~~~~~pfgG~~~sG~g~~~-g~~~~~~~~~~k~i~~ 406 (414)
..+.+||||+|.||+|+++ |.+++++||++|++..
T Consensus 464 ~~~~~~~~~~~~PfGG~k~SG~Gr~~g~~~~l~~~t~~~~~~~ 506 (521)
T PRK11903 464 LHTGHGNVMPQSLHGGPGRAGGGEELGGLRALAFYHRRSAVQA 506 (521)
T ss_pred ccccCCCCCCCCCCCCCCcCcCCcccccHHHHHHHhccceeeC
Confidence 3357899999999999985 5899999999888754
|
|
| >TIGR01238 D1pyr5carbox3 delta-1-pyrroline-5-carboxylate dehydrogenase (PutA C-terminal domain) | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.6e-81 Score=634.22 Aligned_cols=387 Identities=30% Similarity=0.457 Sum_probs=358.9
Q ss_pred CHHHHHHHHHhHHHHHHHHHHHcCCChHHHhhccHHHHHHHHHHHHHhhhhhcCceeccccCccccccccCCcEEEEEcC
Q 015031 1 MLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMSRALQGYTLREPIGVVGHIIP 80 (414)
Q Consensus 1 L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p 80 (414)
|+++++.|++++++|++++++|+|||..++ ..|+..+++.+++++...++..+ ...++|+|||++|+|
T Consensus 102 L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a-~~ev~~~i~~l~~~a~~~~~~~~-----------~~~~~P~GVV~~I~p 169 (500)
T TIGR01238 102 LDRLADLLELHMPELMALCVREAGKTIHNA-IAEVREAVDFCRYYAKQVRDVLG-----------EFSVESRGVFVCISP 169 (500)
T ss_pred HHHHHHHHHhHHHHHHHHHHHHcCCCHHHH-HHHHHHHHHHHHHHHHHHHHhcC-----------ceeccCcceEEEECC
Confidence 578999999999999999999999999975 57999999999999987754321 136899999999999
Q ss_pred CCcChHhhHHHHHHHHhcCCeEEEecCCCChhHHHHHHHHHHHcCCCCCeEEEEcCCchhHHHHHHhCCCcCeEEEeCCH
Q 015031 81 WNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGST 160 (414)
Q Consensus 81 ~n~P~~~~~~~~~~ALaaGN~vv~kps~~~~~~~~~l~~~~~~aglp~g~v~~~~~~~~~~~~~l~~~~~~~~v~~tGs~ 160 (414)
||||+...++++++||++||+||+|||+.+|.++..+.+++.++|+|+|++|++++++.+.++.|+.|+++|.|.||||+
T Consensus 170 wN~P~~~~~~~i~~ALaaGN~VVlKps~~tp~~~~~l~~~~~~aGlP~gvv~~v~g~~~~~~~~l~~~~~v~~V~ftGs~ 249 (500)
T TIGR01238 170 WNFPLAIFTGQISAALAAGNTVIAKPAEQTSLIAYRAVELMQEAGFPAGTIQLLPGRGADVGAALTSDPRIAGVAFTGST 249 (500)
T ss_pred CchHHHHHHHHHHHHHHcCCEEEEeCCCCccHHHHHHHHHHHHcCCCCCceEEEecCcchHHHHHhcCCCcCeEEEECCH
Confidence 99999999999999999999999999999999999999999999999999999998776889999999999999999999
Q ss_pred HHHHHHHHHHhhCCC---CceeeeCCCCCceeecCCCCHHHHHHHHHHHHhcccCCccccCcEEEEeCccHHHHHHHHHH
Q 015031 161 DVGRQVMQAAATSNL---KPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVE 237 (414)
Q Consensus 161 ~~~~~i~~~~~~~~~---~~~~~e~gG~~~~iV~~dadl~~a~~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f~~~l~~ 237 (414)
.+++.|.+.++ ++. +|+++|+|||||+||++|||++.|++.+++++|.|+||.|+++++||||++++|+|+++|++
T Consensus 250 ~~g~~v~~~aa-~~~~~~~~v~lElGGknp~IV~~dAdld~Aa~~i~~~~f~nsGQ~C~a~~rv~V~~~i~d~f~~~L~~ 328 (500)
T TIGR01238 250 EVAQLINQTLA-QREDAPVPLIAETGGQNAMIVDSTALPEQVVRDVLRSAFDSAGQRCSALRVLCVQEDVADRVLTMIQG 328 (500)
T ss_pred HHHHHHHHHHh-hcccCCceEEEecCCcCcEEECCCCCHHHHHHHHHHHHHhcCCCCCCCCceeEEcHhhHHHHHHHHHH
Confidence 99999999887 444 79999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhccccCCCCCCCCCccccCCHHHHHHHHHHHHHhhhcCCeEeeCCc---ccCCCCceeeeEEEEeCCCCCcccccccc
Q 015031 238 KAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGK---PIGKKGYYIEPTIFTNVTEDMLIAKNEIF 314 (414)
Q Consensus 238 ~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ga~v~~gg~---~~~~~g~~~~Ptvl~~~~~~~~~~~~E~f 314 (414)
+++++++|+|.++++++||++++.++++++++++++++.|++++.++. ....+|+|++|||+.+ ++|.++++|+|
T Consensus 329 ~~~~~~vG~p~~~~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~l~~~~~~~~~~~~~g~f~~PTvl~~--~~~~~~~eE~F 406 (500)
T TIGR01238 329 AMQELKVGVPHLLTTDVGPVIDAEAKQNLLAHIEHMSQTQKKIAQLTLDDSRACQHGTFVAPTLFEL--DDIAELSEEVF 406 (500)
T ss_pred HHHhCCCCCCCCCCCCcCCCCCHHHHHHHHHHHHHHHHcCCEEEeeccCCCCCCCCCeeEcCEEEcc--CCchHhhCCCc
Confidence 999999999999999999999999999999999999999998874432 1223699999999973 68889999999
Q ss_pred cceEEEeeeC--CHHHHHHHHhcCCCCceEEEecCCHHHHHHHHhccceeEEEECCcCCC--CCCCCccCCCCCCCC-Cc
Q 015031 315 GPVMALMKFK--TVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSIRAGIIWINCYFAF--DSDCPYGGYKMSGFG-RD 389 (414)
Q Consensus 315 gPvl~v~~~~--~~~eai~~~n~~~~gl~~sv~s~d~~~~~~~~~~l~~g~v~vN~~~~~--~~~~pfgG~~~sG~g-~~ 389 (414)
|||++|++|+ ++||||+++|++++||+++|||+|.+.++++++++++|.|+||+.... .+.+||||+|.||+| +.
T Consensus 407 gPvl~v~~~~~~~~deai~~~N~~~~gLs~~vfT~d~~~~~~~~~~l~~G~v~IN~~~~~~~~~~~PfGG~k~SG~G~~~ 486 (500)
T TIGR01238 407 GPVLHVVRYKARELDQIVDQINQTGYGLTMGVHSRIETTYRWIEKHARVGNCYVNRNQVGAVVGVQPFGGQGLSGTGPKA 486 (500)
T ss_pred CCEEEEEEeCCCCHHHHHHHHhCCCCCCeEEEEeCCHHHHHHHHHhCCcceEEECCCCCCCCCCCCCCCccccccCCCcc
Confidence 9999999998 799999999999999999999999999999999999999999987653 245799999999999 79
Q ss_pred chHHHHHhhhccc
Q 015031 390 CGLESLHNYLQVK 402 (414)
Q Consensus 390 ~g~~~~~~~~~~k 402 (414)
+|.+++++|+++|
T Consensus 487 gg~~~~~~~~~~k 499 (500)
T TIGR01238 487 GGPHYLYRLTQVQ 499 (500)
T ss_pred CCHHHHHHHHhhc
Confidence 9999999999987
|
This model represents one of several related branches of delta-1-pyrroline-5-carboxylate dehydrogenase. Members of this branch are the C-terminal domain of the PutA bifunctional proline dehydrogenase / delta-1-pyrroline-5-carboxylate dehydrogenase. |
| >PRK11904 bifunctional proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-80 Score=669.44 Aligned_cols=404 Identities=31% Similarity=0.473 Sum_probs=375.4
Q ss_pred CHHHHHHHHHhHHHHHHHHHHHcCCChHHHhhccHHHHHHHHHHHHHhhhhhcCc--eeccccCccccccccCCcEEEEE
Q 015031 1 MLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGE--VLKMSRALQGYTLREPIGVVGHI 78 (414)
Q Consensus 1 L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~~~~~~~~--~~~~~~~~~~~~~~~P~Gvv~~i 78 (414)
|+++++.|++++++|+.++++|+|||..++ ..|+..+++.+++++..+++..+. .++..++..++.+++|+|||++|
T Consensus 613 L~kaAdll~~~~~eL~~l~~~E~GK~~~~a-~~EV~eaid~lr~ya~~a~~~~~~~~~l~g~~ge~n~~~~~P~GVv~~I 691 (1038)
T PRK11904 613 LERAADLLEANRAELIALCVREAGKTLQDA-IAEVREAVDFCRYYAAQARRLFGAPEKLPGPTGESNELRLHGRGVFVCI 691 (1038)
T ss_pred HHHHHHHHHHhHHHHHHHHHHHhCCCHHHH-HHHHHHHHHHHHHHHHHHHHhhCCCcccCCCCCceeEEEEecceEEEEE
Confidence 578999999999999999999999999975 579999999999999988776543 33444677889999999999999
Q ss_pred cCCCcChHhhHHHHHHHHhcCCeEEEecCCCChhHHHHHHHHHHHcCCCCCeEEEEcCCchhHHHHHHhCCCcCeEEEeC
Q 015031 79 IPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTG 158 (414)
Q Consensus 79 ~p~n~P~~~~~~~~~~ALaaGN~vv~kps~~~~~~~~~l~~~~~~aglp~g~v~~~~~~~~~~~~~l~~~~~~~~v~~tG 158 (414)
+|||||+...++++++||++||+||+|||+.+|+++..+.+++.++|+|+|++|+++|++.+++..|+.||+++.|.|||
T Consensus 692 sPwNfPlai~~~~i~aALaaGNtVIlKPse~tpl~a~~l~~ll~eAGlP~gvl~lv~G~g~~vg~~Lv~~p~v~~V~FTG 771 (1038)
T PRK11904 692 SPWNFPLAIFLGQVAAALAAGNTVIAKPAEQTPLIAAEAVKLLHEAGIPKDVLQLLPGDGATVGAALTADPRIAGVAFTG 771 (1038)
T ss_pred CCCccHHHHHHHHHHHHHHcCCEEEeeCCCcCHHHHHHHHHHHHHhCcCcceEEEeeCCchHHHHHHhcCCCcCeEEEEC
Confidence 99999999999999999999999999999999999999999999999999999999998888999999999999999999
Q ss_pred CHHHHHHHHHHHhhC--CCCceeeeCCCCCceeecCCCCHHHHHHHHHHHHhcccCCccccCcEEEEeCccHHHHHHHHH
Q 015031 159 STDVGRQVMQAAATS--NLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLV 236 (414)
Q Consensus 159 s~~~~~~i~~~~~~~--~~~~~~~e~gG~~~~iV~~dadl~~a~~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f~~~l~ 236 (414)
|+++++.|.+.++.+ ..+|+++|+|||||+||++|||++.|++.+++|+|.++||.|++++++|||++++|+|+++|+
T Consensus 772 S~~~g~~I~~~~A~~~g~~~pvi~ElGGkNa~IV~~dAdld~Av~~iv~saF~~aGQ~CsA~~rl~V~~si~d~fl~~L~ 851 (1038)
T PRK11904 772 STETARIINRTLAARDGPIVPLIAETGGQNAMIVDSTALPEQVVDDVVTSAFRSAGQRCSALRVLFVQEDIADRVIEMLK 851 (1038)
T ss_pred CHHHHHHHHHHHhhccCCCceEEEEcCCcCeEEECCCCCHHHHHHHHHHHHHhCCCCccccCcEEEEeHHHHHHHHHHHH
Confidence 999999999988733 257999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhccccCCCCCCCCCccccCCHHHHHHHHHHHHHhhhcCCeEeeCCcccC--CCCceeeeEEEEeCCCCCcccccccc
Q 015031 237 EKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIG--KKGYYIEPTIFTNVTEDMLIAKNEIF 314 (414)
Q Consensus 237 ~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~--~~g~~~~Ptvl~~~~~~~~~~~~E~f 314 (414)
++++++++|+|.+.++++||++++.+++++.++|+++++ |+++++||..++ ..|+|+.|||+.. +++.+++||+|
T Consensus 852 ~~~~~l~vGdp~d~~t~~GPvI~~~a~~~l~~~I~~a~~-ga~vl~gg~~~~~~~~G~fv~PTvi~~--~~~~~~~eEiF 928 (1038)
T PRK11904 852 GAMAELKVGDPRLLSTDVGPVIDAEAKANLDAHIERMKR-EARLLAQLPLPAGTENGHFVAPTAFEI--DSISQLEREVF 928 (1038)
T ss_pred HHHHhccCCCcccccCCccCCCCHHHHHHHHHHHHHHHc-CCEEEeCCCCCCCCCCceEEeeEEEcc--CCcHHhCCCCc
Confidence 999999999999999999999999999999999999876 889999997653 2599999999963 57788999999
Q ss_pred cceEEEeeeC--CHHHHHHHHhcCCCCceEEEecCCHHHHHHHHhccceeEEEECCcCC--CCCCCCccCCCCCCCC-Cc
Q 015031 315 GPVMALMKFK--TVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSIRAGIIWINCYFA--FDSDCPYGGYKMSGFG-RD 389 (414)
Q Consensus 315 gPvl~v~~~~--~~~eai~~~n~~~~gl~~sv~s~d~~~~~~~~~~l~~g~v~vN~~~~--~~~~~pfgG~~~sG~g-~~ 389 (414)
|||++|++|+ +++|||+++|+++|||+++|||+|.+.++++++++++|+|+||+..+ ....+||||+|.||+| +.
T Consensus 929 GPVL~V~~~~~~~ldeaI~~iN~t~yGLt~~IfS~d~~~~~~~~~~l~aG~vyIN~~~~ga~vg~qPFGG~~~SG~G~ka 1008 (1038)
T PRK11904 929 GPILHVIRYKASDLDKVIDAINATGYGLTLGIHSRIEETADRIADRVRVGNVYVNRNQIGAVVGVQPFGGQGLSGTGPKA 1008 (1038)
T ss_pred CcEEEEEEeCCCCHHHHHHHHhCCCCCCEEEEEcCCHHHHHHHHHhCCEEEEEEeCCCccCCCCCCCCCCCCCCCCCCcc
Confidence 9999999998 69999999999999999999999999999999999999999998765 3356799999999999 68
Q ss_pred chHHHHHhhhcccEEEEeC
Q 015031 390 CGLESLHNYLQVKSVVTPI 408 (414)
Q Consensus 390 ~g~~~~~~~~~~k~i~~~~ 408 (414)
+|++++++|++.|+|+++.
T Consensus 1009 GG~~~L~~f~~~ktv~~~~ 1027 (1038)
T PRK11904 1009 GGPHYLLRFATEKTVTVNT 1027 (1038)
T ss_pred chHHHHHHHhceEEEEEcc
Confidence 8999999999999998764
|
|
| >cd07087 ALDH_F3-13-14_CALDH-like ALDH subfamily: Coniferyl aldehyde dehydrogenase, ALDH families 3, 13, and 14, and other related proteins | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.5e-80 Score=621.63 Aligned_cols=394 Identities=30% Similarity=0.477 Sum_probs=361.3
Q ss_pred CHHHHHHHHHhHHHHHHHHHHHcCCChHHHhhccHHHHHHHHHHHHHhhhhhcCce-ecc---ccCccccccccCCcEEE
Q 015031 1 MLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEV-LKM---SRALQGYTLREPIGVVG 76 (414)
Q Consensus 1 L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~~~~~~~~~-~~~---~~~~~~~~~~~P~Gvv~ 76 (414)
|+++++.|++++++|++++++|+|||..++...|+..+++.++++++.+++..... ... ..+...+.+++|+|||+
T Consensus 26 L~~~a~~l~~~~~el~~~~~~e~Gk~~~~~~~~Ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~ 105 (426)
T cd07087 26 LKALKRMLTENEEEIAAALYADLGKPPAEAYLTEIAVVLGEIDHALKHLKKWMKPRRVSVPLLLQPAKAYVIPEPLGVVL 105 (426)
T ss_pred HHHHHHHHHHhHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhCCcccCCccccCCCceEEEEecCcEEE
Confidence 57999999999999999999999999876656799999999999988776543321 111 12345688899999999
Q ss_pred EEcCCCcChHhhHHHHHHHHhcCCeEEEecCCCChhHHHHHHHHHHHcCCCCCeEEEEcCCchhHHHHHHhCCCcCeEEE
Q 015031 77 HIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSF 156 (414)
Q Consensus 77 ~i~p~n~P~~~~~~~~~~ALaaGN~vv~kps~~~~~~~~~l~~~~~~aglp~g~v~~~~~~~~~~~~~l~~~~~~~~v~~ 156 (414)
+|+|||||+...++++++||++||+||+|||+.+|.++..+.+++.+ |+|+|++++++++ .+.+..|+.|+ +|.|.|
T Consensus 106 ~i~p~n~P~~~~~~~~~~aL~aGN~vvlKps~~~p~~~~~l~~~~~~-~~P~gv~~vv~g~-~~~~~~l~~~~-v~~V~f 182 (426)
T cd07087 106 IIGPWNYPLQLALAPLIGAIAAGNTVVLKPSELAPATSALLAKLIPK-YFDPEAVAVVEGG-VEVATALLAEP-FDHIFF 182 (426)
T ss_pred EEcCCchHHHHHHHHHHHHHHcCCEEEEECCccCHHHHHHHHHHHHH-hCCCCEEEEEeCC-chHHHHHHhCC-CCEEEE
Confidence 99999999999999999999999999999999999999999999999 6999999999984 45688899998 999999
Q ss_pred eCCHHHHHHHHHHHhhCCCCceeeeCCCCCceeecCCCCHHHHHHHHHHHHhcccCCccccCcEEEEeCccHHHHHHHHH
Q 015031 157 TGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLV 236 (414)
Q Consensus 157 tGs~~~~~~i~~~~~~~~~~~~~~e~gG~~~~iV~~dadl~~a~~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f~~~l~ 236 (414)
|||+++++.|.+.++ .+++|+++|+|||||+||++|||++.|++.+++++|.|+||.|+++++||||++++|+|+++|+
T Consensus 183 tGs~~~g~~i~~~a~-~~~~~~~lelgG~~~~iV~~dadl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~d~f~~~L~ 261 (426)
T cd07087 183 TGSPAVGKIVMEAAA-KHLTPVTLELGGKSPCIVDKDANLEVAARRIAWGKFLNAGQTCIAPDYVLVHESIKDELIEELK 261 (426)
T ss_pred eCChHHHHHHHHHHH-hhCCceEEeccCCCceEecCCCCHHHHHHHHHHHHHhccCCccccCCEEEEcHHHHHHHHHHHH
Confidence 999999999999887 7889999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhccccCCCCCCCCCccccCCHHHHHHHHHHHHHhhhcCCeEeeCCcccCCCCceeeeEEEEeCCCCCcccccccccc
Q 015031 237 EKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIGKKGYYIEPTIFTNVTEDMLIAKNEIFGP 316 (414)
Q Consensus 237 ~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgP 316 (414)
+.+++++.++|. +.+++||++++.++++++++++++ ++++||... .+|+|++|||+.+++++|++++||+|||
T Consensus 262 ~~~~~l~~~~~~-~~~~~gpli~~~~~~~~~~~i~~a-----~v~~gg~~~-~~g~~~~Ptvl~~~~~~~~~~~eE~fgP 334 (426)
T cd07087 262 KAIKEFYGEDPK-ESPDYGRIINERHFDRLASLLDDG-----KVVIGGQVD-KEERYIAPTILDDVSPDSPLMQEEIFGP 334 (426)
T ss_pred HHHHHHcCCCCc-cCCCcCCCCCHHHHHHHHHHHhcc-----eEEeCCccC-CCCCEEeeEEEecCCCCCHHHhcccccc
Confidence 999999866664 688999999999999999999765 788998764 3689999999999999999999999999
Q ss_pred eEEEeeeCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHHhccceeEEEECCcCC--CCCCCCccCCCCCCCCCcchHHH
Q 015031 317 VMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSIRAGIIWINCYFA--FDSDCPYGGYKMSGFGRDCGLES 394 (414)
Q Consensus 317 vl~v~~~~~~~eai~~~n~~~~gl~~sv~s~d~~~~~~~~~~l~~g~v~vN~~~~--~~~~~pfgG~~~sG~g~~~g~~~ 394 (414)
|++|++|+|+||||+++|+++|||++||||+|.+.++++++++++|+|+||+.+. ..+.+||||+|.||+|+++|.++
T Consensus 335 vl~v~~~~~~~eai~~~n~~~~gL~~~v~t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~~~PfGG~k~SG~G~~~g~~~ 414 (426)
T cd07087 335 ILPILTYDDLDEAIEFINSRPKPLALYLFSEDKAVQERVLAETSSGGVCVNDVLLHAAIPNLPFGGVGNSGMGAYHGKAG 414 (426)
T ss_pred eEEEEEeCCHHHHHHHHhCCCCCceEEEECCCHHHHHHHHhcCCcccEEECCcccccCCCCCCCCCCCcccCCCccCHHH
Confidence 9999999999999999999999999999999999999999999999999998764 34789999999999999999999
Q ss_pred HHhhhcccEEE
Q 015031 395 LHNYLQVKSVV 405 (414)
Q Consensus 395 ~~~~~~~k~i~ 405 (414)
+++||++|+++
T Consensus 415 l~~~~~~k~~~ 425 (426)
T cd07087 415 FDTFSHLKSVL 425 (426)
T ss_pred HHHhccceeec
Confidence 99999999874
|
ALDH subfamily which includes NAD(P)+-dependent, aldehyde dehydrogenase, family 3 member A1 and B1 (ALDH3A1, ALDH3B1, EC=1.2.1.5) and fatty aldehyde dehydrogenase, family 3 member A2 (ALDH3A2, EC=1.2.1.3), and also plant ALDH family members ALDH3F1, ALDH3H1, and ALDH3I1, fungal ALDH14 (YMR110C) and the protozoan family 13 member (ALDH13), as well as coniferyl aldehyde dehydrogenases (CALDH, EC=1.2.1.68), and other similar sequences, such as the Pseudomonas putida benzaldehyde dehydrogenase I that is involved in the metabolism of mandelate. |
| >PRK11563 bifunctional aldehyde dehydrogenase/enoyl-CoA hydratase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-80 Score=652.31 Aligned_cols=400 Identities=26% Similarity=0.344 Sum_probs=358.3
Q ss_pred CHHHHHHHHHhHHHHHHHHHHHcCCChHHHhhccHHHHHHHHHHHHHhhhhhc--------Cceeccc-cC-cccccccc
Q 015031 1 MLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIH--------GEVLKMS-RA-LQGYTLRE 70 (414)
Q Consensus 1 L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~~~~~~--------~~~~~~~-~~-~~~~~~~~ 70 (414)
|+++++.|++|+++|++ +++|+|||..++ ..|+..+++.+++++.++.+.. ++..+.. .+ ...+..++
T Consensus 69 L~~~a~~l~~~~~ela~-l~~e~GK~~~~a-~~ev~~~~~~~~~~a~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~ 146 (675)
T PRK11563 69 LKALAKYLLERKEELYA-LSAQTGATRRDS-WIDIEGGIGTLFTYASKGRRELPNDTVLVEGEVEPLSKGGTFAGRHILT 146 (675)
T ss_pred HHHHHHHHHHhHHHHHH-HHHHhCCCHHHH-HHHHHHHHHHHHHHHHHHhhhccccccccCCccccccCCCcccceEEEe
Confidence 57999999999999999 599999999975 4699999999999998875532 2222211 11 12467889
Q ss_pred CC-cEEEEEcCCCcChHhhHHHHHHHHhcCCeEEEecCCCChhHHHHHHHHHHHcC-CCCCeEEEEcCCchhHHHHHHhC
Q 015031 71 PI-GVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAG-VPDGVLNVVPGFGPTAGAAIASH 148 (414)
Q Consensus 71 P~-Gvv~~i~p~n~P~~~~~~~~~~ALaaGN~vv~kps~~~~~~~~~l~~~~~~ag-lp~g~v~~~~~~~~~~~~~l~~~ 148 (414)
|+ |||++|+|||||+...++++++||++||+||+|||+.+|+++..+.+++.++| +|+|++|+++|++. ..+..+
T Consensus 147 p~~GVv~~I~PwNfP~~~~~~~i~pALaaGN~VV~KPse~tp~~a~~l~~~~~eaG~~P~gv~~vv~g~~~---~~~~~~ 223 (675)
T PRK11563 147 PLEGVAVHINAFNFPVWGMLEKLAPAFLAGVPAIVKPATATAYLTEAVVRLIVESGLLPEGALQLICGSAG---DLLDHL 223 (675)
T ss_pred ecCceEEEECCCchHHHHHHHHHHHHHHcCCeEEEECCCCCcHHHHHHHHHHHHcCCCCCCcEEEeeCCHH---HHhhcC
Confidence 97 99999999999999999999999999999999999999999999999999999 99999999998532 334444
Q ss_pred CCcCeEEEeCCHHHHHHHHHHH-hhCCCCceeeeCCCCCceeecCCCC-----HHHHHHHHHHHHhcccCCccccCcEEE
Q 015031 149 MDIDKVSFTGSTDVGRQVMQAA-ATSNLKPVSLELGGKSPLLIFDDVD-----VNTAADMALLGILFNKGEICVASSRVY 222 (414)
Q Consensus 149 ~~~~~v~~tGs~~~~~~i~~~~-~~~~~~~~~~e~gG~~~~iV~~dad-----l~~a~~~i~~~~~~~~Gq~C~a~~~v~ 222 (414)
++++.|.||||+++|+.|.+.+ +..+++|+++|+|||||+||++||| ++.|++.+++++|.|+||.|++++|+|
T Consensus 224 ~~i~~v~FTGS~~~G~~i~~~~~a~~~~~~~~lELGGknp~IV~~DAd~~~~dld~aa~~i~~~~f~~aGQ~C~a~~rv~ 303 (675)
T PRK11563 224 DGQDVVTFTGSAATAQKLRAHPNVVANSVPFTAEADSLNAAILGPDATPGTPEFDLFVKEVVREMTVKAGQKCTAIRRAI 303 (675)
T ss_pred CCCCEEEEECcHHHHHHHHhhhhhhhCCceEEEecCCcCceEECCCCCcCchhHHHHHHHHHHHHHHhCCCccccceeEE
Confidence 6799999999999999999853 2377899999999999999999995 999999999999999999999999999
Q ss_pred EeCccHHHHHHHHHHHHhccccCCCCCCCCCccccCCHHHHHHHHHHHHHhhhcCCeEeeCCccc-------CCCCceee
Q 015031 223 VQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPI-------GKKGYYIE 295 (414)
Q Consensus 223 V~~~~~~~f~~~l~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ga~v~~gg~~~-------~~~g~~~~ 295 (414)
||+++||+|+++|+++++++++|+|.++++++||++++.+++++.++|++|+++ +++++||... ..+|+|++
T Consensus 304 V~~~i~d~f~~~l~~~~~~l~vG~p~d~~t~~GPli~~~~~~~i~~~i~~a~~~-a~vl~Gg~~~~~~~~~~~~~g~f~~ 382 (675)
T PRK11563 304 VPRALVDAVIEALRARLAKVVVGDPRLEGVRMGALASLEQREDVREKVAALLAA-AEIVFGGPDSFEVVGADAEKGAFFP 382 (675)
T ss_pred eeHHHHHHHHHHHHHHHhcCccCCCCCCCCcccCCcCHHHHHHHHHHHHHHHhC-CEEEECCcccccccCCCCCCCeeEC
Confidence 999999999999999999999999999999999999999999999999999998 9999999632 13689999
Q ss_pred eEEEEeCCC--CCcccccccccceEEEeeeCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHHhccc--eeEEEECCcCC
Q 015031 296 PTIFTNVTE--DMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSIR--AGIIWINCYFA 371 (414)
Q Consensus 296 Ptvl~~~~~--~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~sv~s~d~~~~~~~~~~l~--~g~v~vN~~~~ 371 (414)
|||+.++++ ++++++||+||||++|++|+|.||||+++|+++|||++||||+|.+.+.+++++++ +|.|+||+.+.
T Consensus 383 PTvl~~v~~~~~~~i~~eEiFGPVl~V~~~~~~~eai~~aN~s~~gL~asvft~d~~~a~~~~~~l~~~~G~v~iN~~~~ 462 (675)
T PRK11563 383 PTLLYCDDPLEAPAVHDVEAFGPVSTLMPYDDLDEAIELAARGKGSLVASLVTADPEVARELVLGAAPWHGRLLVLNRES 462 (675)
T ss_pred CEEEeccCchhhhhHhhccccCCceEEEecCCHHHHHHHHhcCCCCceEEEEeCCHHHHHHHHHHHHhcCCEEEEcCccc
Confidence 999999998 57999999999999999999999999999999999999999999999999999997 99999997531
Q ss_pred ---------CCCCCCccCCCCCCCCCc-chHHHHHhhhcccEEEE
Q 015031 372 ---------FDSDCPYGGYKMSGFGRD-CGLESLHNYLQVKSVVT 406 (414)
Q Consensus 372 ---------~~~~~pfgG~~~sG~g~~-~g~~~~~~~~~~k~i~~ 406 (414)
..+.+||||+|.||+|++ +|.+++++|+++|++..
T Consensus 463 ~~~~~~~~~~~~~~pfGG~k~SG~G~~~~g~~~~~~f~~~k~~~~ 507 (675)
T PRK11563 463 AKESTGHGSPLPQLVHGGPGRAGGGEELGGLRGVKHYMQRTAVQG 507 (675)
T ss_pred cccccCCCCCCcCCCcCCCCCCCCCccccchhHHHHhheeeeeec
Confidence 125789999999999998 46999999999999864
|
|
| >KOG2456 consensus Aldehyde dehydrogenase [Energy production and conversion] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.1e-79 Score=569.93 Aligned_cols=397 Identities=26% Similarity=0.417 Sum_probs=360.8
Q ss_pred CHHHHHHHHHhHHHHHHHHHHHcCCChHHHhhccHHHHHHHHHHHHHhhhhhcCc----eeccccCccccccccCCcEEE
Q 015031 1 MLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGE----VLKMSRALQGYTLREPIGVVG 76 (414)
Q Consensus 1 L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~~~~~~~~----~~~~~~~~~~~~~~~P~Gvv~ 76 (414)
|+++...+++|.++|.+++..|.+|+..|+...|+.-.++.++++....++.... ..........+++.+|+|||+
T Consensus 30 L~~L~r~i~e~e~~i~~Al~~DL~k~~~es~~~Ev~~~~~~i~~~l~~L~~wv~~~~v~~~~~t~~dk~~I~~~p~GvVL 109 (477)
T KOG2456|consen 30 LEALYRMIQENEKEIIEALAADLHKPELESYLNEVGYVLNEIRYALENLPEWVKPEPVKKSFLTFLDKAYIEKEPLGVVL 109 (477)
T ss_pred HHHHHHHHHhhHHHHHHHHHHHhccchhHHHHHHHHHHHHHHHHHHHhhHHhccccccCcccccccCceeEEecCCceEE
Confidence 5678899999999999999999999999988889999988888876655443222 111122346789999999999
Q ss_pred EEcCCCcChHhhHHHHHHHHhcCCeEEEecCCCChhHHHHHHHHHHHcCCCCCeEEEEcCCchhHHHHHHhCCCcCeEEE
Q 015031 77 HIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSF 156 (414)
Q Consensus 77 ~i~p~n~P~~~~~~~~~~ALaaGN~vv~kps~~~~~~~~~l~~~~~~aglp~g~v~~~~~~~~~~~~~l~~~~~~~~v~~ 156 (414)
+|+|||||+...+.++++||+|||+||+|||+.+|.++..+++++.+. ++.+++.++.|.-+|. ..|+.| +.|.|+|
T Consensus 110 iI~~wNyP~~L~l~PligAiAAGN~VVlKPSEls~n~a~~lakllp~Y-ld~~~~~VV~Ggv~ET-t~LL~~-rfD~Ify 186 (477)
T KOG2456|consen 110 IIGPWNYPLNLTLVPLIGAIAAGNAVVLKPSELSPNTAKLLAKLLPQY-LDQDLIRVVNGGVPET-TELLKQ-RFDHIFY 186 (477)
T ss_pred EEccCCCcceeehhhhhhhhhcCCEEEechhhcChhHHHHHHHHHHHh-cCcceEEEecCCCchH-HHHHHh-hccEEEe
Confidence 999999999999999999999999999999999999999999999999 9999999999954554 455555 7999999
Q ss_pred eCCHHHHHHHHHHHhhCCCCceeeeCCCCCceeecCCCCHHHHHHHHHHHHhcccCCccccCcEEEEeCccHHHHHHHHH
Q 015031 157 TGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLV 236 (414)
Q Consensus 157 tGs~~~~~~i~~~~~~~~~~~~~~e~gG~~~~iV~~dadl~~a~~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f~~~l~ 236 (414)
|||+.+|+.|+.+++ ++++||++|+|||+|++|++|+|++-+++.|+|+++.|+||.|.+|++|+++.+++..++++++
T Consensus 187 TGsp~VgkIim~aAa-KhLTPvtLELGGKsP~~vd~~~d~~ia~~RI~~gk~~N~GQtCvapDYiL~~k~~~~kli~alk 265 (477)
T KOG2456|consen 187 TGSPRVGKIIMAAAA-KHLTPVTLELGGKSPCYVDKNCDLKIAARRIAWGKWMNSGQTCVAPDYILCSKSIQPKLIDALK 265 (477)
T ss_pred cCCchHHHHHHHHHH-hcCCcEEEEcCCCCCeeecCCcCHHHHHHHHHHHhhccCCCeeccCCeEEecHhhhHHHHHHHH
Confidence 999999999999988 9999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhccccCCCCCCCCCccccCCHHHHHHHHHHHHHhhhcCCeEeeCCcccCCCCceeeeEEEEeCCCCCcccccccccc
Q 015031 237 EKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIGKKGYYIEPTIFTNVTEDMLIAKNEIFGP 316 (414)
Q Consensus 237 ~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgP 316 (414)
..++++. |....++.+++.+|+..+++|+..+++.- .+|+.||..+. ...|++|||+.|+++++++|+||+|||
T Consensus 266 ~~l~eFY-G~n~~eS~d~sRiIn~~hf~Rl~~ll~~~----~kv~~Gg~~d~-~d~~I~PTIL~DV~~~~p~M~eEIFGP 339 (477)
T KOG2456|consen 266 STLKEFY-GENPKESKDLSRIINQRHFQRLSALLDET----GKVAIGGESDE-SDRYIAPTILLDVPEDSPVMQEEIFGP 339 (477)
T ss_pred HHHHHHh-CCCccccccHHHHhhHHHHHHHHHHhcCC----CceecCCccch-hhcccCCeEEecCCCCChhhhhhhccC
Confidence 9999985 65566789999999999999999988643 58999998664 667999999999999999999999999
Q ss_pred eEEEeeeCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHHhccceeEEEECCcCC--CCCCCCccCCCCCCCCCcchHHH
Q 015031 317 VMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSIRAGIIWINCYFA--FDSDCPYGGYKMSGFGRDCGLES 394 (414)
Q Consensus 317 vl~v~~~~~~~eai~~~n~~~~gl~~sv~s~d~~~~~~~~~~l~~g~v~vN~~~~--~~~~~pfgG~~~sG~g~~~g~~~ 394 (414)
||+|+.+++++|+|+.+|..+..|++|+||+|.+...++.+++.+|.|.+|+..+ ....+||||+|.||+|++||++|
T Consensus 340 iLPIi~v~~l~Eai~~In~~eKPLa~Y~Fs~n~~~vkr~l~~tsSGgvt~ND~i~H~~~~~lPFGGVG~SGmG~YhGK~s 419 (477)
T KOG2456|consen 340 ILPIITVQSLDEAINFINEREKPLALYIFSNNEKLVKRFLTETSSGGVTVNDVIMHVTLDSLPFGGVGESGMGRYHGKFS 419 (477)
T ss_pred ccceeEhhhHHHHHHHHhcCCCceEEEEecCCHHHHHHHHHhccCCCeeecceEEEEEeeccCcCCcCcccccccccccc
Confidence 9999999999999999999999999999999999999999999999999999755 45789999999999999999999
Q ss_pred HHhhhcccEEEEe
Q 015031 395 LHNYLQVKSVVTP 407 (414)
Q Consensus 395 ~~~~~~~k~i~~~ 407 (414)
++.|++.|+|..+
T Consensus 420 FdTFSH~k~~l~r 432 (477)
T KOG2456|consen 420 FDTFSHEKSCLLR 432 (477)
T ss_pred ccccccchhhhhc
Confidence 9999999999654
|
|
| >PRK11809 putA trifunctional transcriptional regulator/proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.1e-78 Score=654.31 Aligned_cols=388 Identities=30% Similarity=0.478 Sum_probs=361.2
Q ss_pred CHHHHHHHHHhHHHHHHHHHHHcCCChHHHhhccHHHHHHHHHHHHHhhhhhcCceeccccCccccccccCCcEEEEEcC
Q 015031 1 MLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMSRALQGYTLREPIGVVGHIIP 80 (414)
Q Consensus 1 L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p 80 (414)
|+++++.|++|+++|+.+++.|+|||..++ ..|+..++++++||+..++... ....++|+|||++|+|
T Consensus 710 L~r~Adlle~~~~eL~~l~~~EaGKt~~~A-~~EV~eaidflryyA~~a~~~~-----------~~~~~~PlGVV~~IsP 777 (1318)
T PRK11809 710 LERAADLMEAQMQTLMGLLVREAGKTFSNA-IAEVREAVDFLRYYAGQVRDDF-----------DNDTHRPLGPVVCISP 777 (1318)
T ss_pred HHHHHHHHHHCHHHHHHHHHHHhCCCHHHH-HHHHHHHHHHHHHHHHHHHHhc-----------CCceeecccEEEEECC
Confidence 578999999999999999999999999975 6799999999999998765421 1246899999999999
Q ss_pred CCcChHhhHHHHHHHHhcCCeEEEecCCCChhHHHHHHHHHHHcCCCCCeEEEEcCCchhHHHHHHhCCCcCeEEEeCCH
Q 015031 81 WNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGST 160 (414)
Q Consensus 81 ~n~P~~~~~~~~~~ALaaGN~vv~kps~~~~~~~~~l~~~~~~aglp~g~v~~~~~~~~~~~~~l~~~~~~~~v~~tGs~ 160 (414)
||||+...++++++||++||+||+|||+.+|+++..+.+++.++|+|+|++|+++|++.+++..|+.||+++.|.||||+
T Consensus 778 WNFPlai~~g~iaaALaAGN~VV~KPseqTpl~a~~lv~ll~eAGlP~gvlqlv~G~g~~vg~~Lv~~p~V~~V~FTGSt 857 (1318)
T PRK11809 778 WNFPLAIFTGQVAAALAAGNSVLAKPAEQTPLIAAQAVRILLEAGVPAGVVQLLPGRGETVGAALVADARVRGVMFTGST 857 (1318)
T ss_pred CccHHHHHHHHHHHHHHcCCeEEEeCCCCcHHHHHHHHHHHHHhCcCcCeEEEeeCCcHHHHHHHhcCCCcCEEEEeCCH
Confidence 99999999999999999999999999999999999999999999999999999999888899999999999999999999
Q ss_pred HHHHHHHHHHhhCCC------CceeeeCCCCCceeecCCCCHHHHHHHHHHHHhcccCCccccCcEEEEeCccHHHHHHH
Q 015031 161 DVGRQVMQAAATSNL------KPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKK 234 (414)
Q Consensus 161 ~~~~~i~~~~~~~~~------~~~~~e~gG~~~~iV~~dadl~~a~~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f~~~ 234 (414)
++|+.|.+.++ .++ +|+++|+||+|++||++|||+|.|++.+++|+|.++||.|++.+++|||++++|+|+++
T Consensus 858 ~tg~~I~~~aA-~~l~~~g~~~pliaElGGkNa~IVdsdAdle~Av~~iv~sAF~~aGQrCsA~~rl~V~e~Iad~fl~~ 936 (1318)
T PRK11809 858 EVARLLQRNLA-GRLDPQGRPIPLIAETGGQNAMIVDSSALTEQVVADVLASAFDSAGQRCSALRVLCLQDDVADRTLKM 936 (1318)
T ss_pred HHHHHHHHHHh-hhcccccCceeEEEecCCccceEECCCCCHHHHHHHHHHHHHhcCCCccccCcEEEEcHHHHHHHHHH
Confidence 99999999887 433 79999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhccccCCCCCCCCCccccCCHHHHHHHHHHHHHhhhcCCeEeeCCcccC---CCCceeeeEEEEeCCCCCccccc
Q 015031 235 LVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIG---KKGYYIEPTIFTNVTEDMLIAKN 311 (414)
Q Consensus 235 l~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~---~~g~~~~Ptvl~~~~~~~~~~~~ 311 (414)
|++.++.+++|+|.+.++++||+|++.++++++++|++++++|++++.++.... +.|+|++|||+.. +++.++++
T Consensus 937 L~~a~~~l~vGdP~~~~tdvGPvId~~a~~~i~~~I~~a~~~G~~v~~g~~~~~~~~~~G~fv~PTIi~~--~~~~~l~e 1014 (1318)
T PRK11809 937 LRGAMAECRMGNPDRLSTDIGPVIDAEAKANIERHIQAMRAKGRPVFQAARENSEDWQSGTFVPPTLIEL--DSFDELKR 1014 (1318)
T ss_pred HHHHHHhcCCCCcccccCCcCCCCCHHHHHHHHHHHHHHHHcCCEEEecCCCCCCCCCCCeEEeeEEEec--cchhhhcC
Confidence 999999999999999999999999999999999999999999999998875432 4699999999974 56788999
Q ss_pred ccccceEEEeeeC--CHHHHHHHHhcCCCCceEEEecCCHHHHHHHHhccceeEEEECCcCCC--CCCCCccCCCCCCCC
Q 015031 312 EIFGPVMALMKFK--TVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSIRAGIIWINCYFAF--DSDCPYGGYKMSGFG 387 (414)
Q Consensus 312 E~fgPvl~v~~~~--~~~eai~~~n~~~~gl~~sv~s~d~~~~~~~~~~l~~g~v~vN~~~~~--~~~~pfgG~~~sG~g 387 (414)
|+||||++|++|+ +++|+|+++|+++|||+++|||+|.+.++++++++++|+|+||+.... ...+||||+|.||+|
T Consensus 1015 EiFGPVL~V~~~~~~~ldeaI~~iN~t~yGLt~gV~Srd~~~~~~v~~~l~aGnvyINr~~~gavvg~qPFGG~g~SG~G 1094 (1318)
T PRK11809 1015 EVFGPVLHVVRYNRNQLDELIEQINASGYGLTLGVHTRIDETIAQVTGSAHVGNLYVNRNMVGAVVGVQPFGGEGLSGTG 1094 (1318)
T ss_pred cccCceEEEEEeCCCCHHHHHHHHhcCCCCceEEEEeCCHHHHHHHHHhCCEeEEEECCCCcCCCcCCCCCCCcCcCCCC
Confidence 9999999999996 799999999999999999999999999999999999999999987652 345799999999999
Q ss_pred -CcchHHHHHhhhcccE
Q 015031 388 -RDCGLESLHNYLQVKS 403 (414)
Q Consensus 388 -~~~g~~~~~~~~~~k~ 403 (414)
..+|++++.+|++.+.
T Consensus 1095 ~kaGGp~yL~~f~~~~~ 1111 (1318)
T PRK11809 1095 PKAGGPLYLYRLLATRP 1111 (1318)
T ss_pred CCCCCHHHHHHHhccCC
Confidence 5799999999999874
|
|
| >cd07126 ALDH_F12_P5CDH Delta(1)-pyrroline-5-carboxylate dehydrogenase, ALDH family 12 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-77 Score=604.83 Aligned_cols=381 Identities=23% Similarity=0.296 Sum_probs=341.6
Q ss_pred CHHHHHHHHHh--HHHHHHHHHHHcCCChHHHhhccHHHHHHHHHHHHHhhhhhcCcee--cc-ccCccccccccCCcEE
Q 015031 1 MLKFADLIEEH--AEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVL--KM-SRALQGYTLREPIGVV 75 (414)
Q Consensus 1 L~~~a~~l~~~--~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~~~~~~~~~~--~~-~~~~~~~~~~~P~Gvv 75 (414)
|+++++.|+++ .++|++++++|+|||..++ ..|+..+++.+++++...++..+... +. ..+...+++++|+|||
T Consensus 68 l~~~a~~l~~~~~~~~la~~~~~e~GK~~~~a-~~Ev~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~v~r~P~GVV 146 (489)
T cd07126 68 SHRVAHELRKPEVEDFFARLIQRVAPKSDAQA-LGEVVVTRKFLENFAGDQVRFLARSFNVPGDHQGQQSSGYRWPYGPV 146 (489)
T ss_pred HHHHHHHHHcCCCHHHHHHHHHHHcCCCHHHH-HHHHHHHHHHHHHHHHHHHHhcCceeccCCCCCCceeEEEEecceEE
Confidence 57899999998 4999999999999999875 67999999999999988766544432 21 1245678999999999
Q ss_pred EEEcCCCcChHhhHHHHHHHHhcCCeEEEecCCCChhHHHHHHHHHHHcCCCCCeEEEEcCCchhHHHHHHhCCCcCeEE
Q 015031 76 GHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVS 155 (414)
Q Consensus 76 ~~i~p~n~P~~~~~~~~~~ALaaGN~vv~kps~~~~~~~~~l~~~~~~aglp~g~v~~~~~~~~~~~~~l~~~~~~~~v~ 155 (414)
++|+|||||+...++++++||++||+||+|||+.+|+++..|.+++.++|+|+|++|+++|.+.+ +..++.|+++|+|.
T Consensus 147 ~~I~PwNfP~~l~~~~ia~ALaaGN~VVlKPSe~tp~~~~~l~~~~~~aGlP~gv~~vv~G~~~~-~~~l~~~~~v~~V~ 225 (489)
T cd07126 147 AIITPFNFPLEIPALQLMGALFMGNKPLLKVDSKVSVVMEQFLRLLHLCGMPATDVDLIHSDGPT-MNKILLEANPRMTL 225 (489)
T ss_pred EEECCCchHHHHHHHHHHHHHHcCCEEEEECCCCCCHHHHHHHHHHHHhCcCcCcEEEEeCCchh-HHHHhcCCCCCEEE
Confidence 99999999999999999999999999999999999999999999999999999999999996655 55678899999999
Q ss_pred EeCCHHHHHHHHHHHhhCCCCceeeeCCCCCceeecCCC-CHHHHHHHHHHHHhcccCCccccCcEEEEeCcc-HHHHHH
Q 015031 156 FTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDV-DVNTAADMALLGILFNKGEICVASSRVYVQEGI-YDEFEK 233 (414)
Q Consensus 156 ~tGs~~~~~~i~~~~~~~~~~~~~~e~gG~~~~iV~~da-dl~~a~~~i~~~~~~~~Gq~C~a~~~v~V~~~~-~~~f~~ 233 (414)
||||+++|+.|...++ +++.+|+||+||+||++|| |++.|++.+++++|.|+||.|++++|+|||+++ +|+|++
T Consensus 226 FTGS~~vGr~i~~~~g----~k~~lElgg~~~~IV~~Da~dld~a~~~~~~g~f~naGQ~C~a~~rv~V~~~i~~d~f~~ 301 (489)
T cd07126 226 FTGSSKVAERLALELH----GKVKLEDAGFDWKILGPDVSDVDYVAWQCDQDAYACSGQKCSAQSILFAHENWVQAGILD 301 (489)
T ss_pred EECCHHHHHHHHHHhC----CCEEeecCCCCceEECCCcccHHHHHHHHHHHHHhcCCCcCCCCceEEEeCcchHHHHHH
Confidence 9999999999988765 5789999999999999999 999999999999999999999999999999995 689999
Q ss_pred HHHHHHhccccCCCCCCCCCccccCCHHHHHHHHHHHHHhhh-cCCeEeeCCcccCC----CC-ceeeeEEEEe------
Q 015031 234 KLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKR-EGATLLTGGKPIGK----KG-YYIEPTIFTN------ 301 (414)
Q Consensus 234 ~l~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~-~ga~v~~gg~~~~~----~g-~~~~Ptvl~~------ 301 (414)
+|++.++++++|+ +++||+++.. .+++.++++++++ +|+++++||..... ++ .|++|||+..
T Consensus 302 ~l~~~~~~~~~g~-----~~~Gpli~~~-~~~v~~~i~~a~~~~Ga~~l~GG~~~~~~~~~~~~~~~~PTvl~~~~~~~~ 375 (489)
T cd07126 302 KLKALAEQRKLED-----LTIGPVLTWT-TERILDHVDKLLAIPGAKVLFGGKPLTNHSIPSIYGAYEPTAVFVPLEEIA 375 (489)
T ss_pred HHHHHHHhcccCC-----CcCCCCcCHH-HHHHHHHHHHHHhCCCCEEEeCCcccccccccCCcceecCeEEEecccccc
Confidence 9999999998874 4789999998 9999999999997 89999999976432 23 3899999952
Q ss_pred CCCCCcccccccccceEEEeeeCC--HHHHHHHHhcCCCCceEEEecCCHHHHHHHHhccceeE--EEECCcCCCCCC--
Q 015031 302 VTEDMLIAKNEIFGPVMALMKFKT--VEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSIRAGI--IWINCYFAFDSD-- 375 (414)
Q Consensus 302 ~~~~~~~~~~E~fgPvl~v~~~~~--~~eai~~~n~~~~gl~~sv~s~d~~~~~~~~~~l~~g~--v~vN~~~~~~~~-- 375 (414)
++++|++++||+||||++|++|+| .|||++++|+++|||++||||+|.+.++++++++++|. |+||+.+...+.
T Consensus 376 ~~~~~~i~~eEiFGPVl~V~~~~~~~~deai~~aN~~~~gL~~~vft~d~~~~~~~~~~~~~G~~~v~~n~~~~~~~~~~ 455 (489)
T cd07126 376 IEENFELVTTEVFGPFQVVTEYKDEQLPLVLEALERMHAHLTAAVVSNDIRFLQEVLANTVNGTTYAGIRARTTGAPQNH 455 (489)
T ss_pred CCCCCHHHhCCCcCCEEEEEEECCCCHHHHHHHHhCCCCCceEEEEeCCHHHHHHHHHhCCcceEEEEecCCCCCCCccc
Confidence 567999999999999999999999 99999999999999999999999999999999999999 669987764433
Q ss_pred --CCccCCCCCCCCCcchHH
Q 015031 376 --CPYGGYKMSGFGRDCGLE 393 (414)
Q Consensus 376 --~pfgG~~~sG~g~~~g~~ 393 (414)
.||||+|.||+|+.+...
T Consensus 456 ~~~pfgg~k~sg~g~~~~~~ 475 (489)
T cd07126 456 WFGPAGDPRGAGIGTPEAIR 475 (489)
T ss_pred CcCCCCCCcccCCCCHhHHH
Confidence 899999999999876543
|
Delta(1)-pyrroline-5-carboxylate dehydrogenase (P5CDH, EC=1.5.1.12), family 12: a proline catabolic enzyme of the aldehyde dehydrogenase (ALDH) protein superfamily. P5CDH is a mitochondrial enzyme involved in proline degradation and catalyzes the NAD + -dependent conversion of P5C to glutamate. The P5CDH, ALDH12A1 gene, in Arabidopsis, has been identified as an osmotic-stress-inducible ALDH gene. This CD contains both Viridiplantae and Alveolata P5CDH sequences. |
| >cd07078 ALDH NAD(P)+ dependent aldehyde dehydrogenase family | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.8e-77 Score=602.11 Aligned_cols=403 Identities=51% Similarity=0.845 Sum_probs=379.1
Q ss_pred CHHHHHHHHHhHHHHHHHHHHHcCCChHHHhhccHHHHHHHHHHHHHhhhhhcCce-eccccCccccccccCCcEEEEEc
Q 015031 1 MLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEV-LKMSRALQGYTLREPIGVVGHII 79 (414)
Q Consensus 1 L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~~~~~~~~~-~~~~~~~~~~~~~~P~Gvv~~i~ 79 (414)
|+++++.|.+++++|+++++.|+||+..+ ...|+..+++.+++++..+++..+.. .....+...+.+++|+|||++|+
T Consensus 26 l~~~~~~l~~~~~~l~~~~~~etG~~~~~-~~~ei~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~ 104 (432)
T cd07078 26 LRKLADLLEERREELAALETLETGKPIEE-ALGEVARAADTFRYYAGLARRLHGEVIPSPDPGELAIVRREPLGVVGAIT 104 (432)
T ss_pred HHHHHHHHHHhHHHHHHHHHHHcCCCHHH-HHHHHHHHHHHHHHHHHHHHHhcCccccccCCCceEEEEEeecceEEEEC
Confidence 57899999999999999999999999875 57899999999999988877655443 22234667889999999999999
Q ss_pred CCCcChHhhHHHHHHHHhcCCeEEEecCCCChhHHHHHHHHHHHcCCCCCeEEEEcCCchhHHHHHHhCCCcCeEEEeCC
Q 015031 80 PWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGS 159 (414)
Q Consensus 80 p~n~P~~~~~~~~~~ALaaGN~vv~kps~~~~~~~~~l~~~~~~aglp~g~v~~~~~~~~~~~~~l~~~~~~~~v~~tGs 159 (414)
|||||+...++++++||++||+||+|||+.+|.++..+.++|.++|+|+++++++++++.+.+..|..|+++|.|.||||
T Consensus 105 p~N~P~~~~~~~~~~AL~aGN~vilkps~~~~~~~~~l~~~l~~ag~p~~~~~~~~~~~~~~~~~l~~~~~i~~v~ftGs 184 (432)
T cd07078 105 PWNFPLLLAAWKLAPALAAGNTVVLKPSELTPLTALLLAELLAEAGLPPGVLNVVTGDGDEVGAALASHPRVDKISFTGS 184 (432)
T ss_pred CCccHHHHHHHHHHHHHHcCCEEEEECCCCChHHHHHHHHHHHHcCCCcCcEEEEecCchHHHHHHhcCCCCCEEEEECc
Confidence 99999999999999999999999999999999999999999999999999999999976668899999999999999999
Q ss_pred HHHHHHHHHHHhhCCCCceeeeCCCCCceeecCCCCHHHHHHHHHHHHhcccCCccccCcEEEEeCccHHHHHHHHHHHH
Q 015031 160 TDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKA 239 (414)
Q Consensus 160 ~~~~~~i~~~~~~~~~~~~~~e~gG~~~~iV~~dadl~~a~~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f~~~l~~~~ 239 (414)
..+++.|.+.++ ++++|+++|+||++++||++|+|++.|++.+++++|.++||.|+++++||||++++++|+++|++++
T Consensus 185 ~~~~~~v~~~a~-~~~~~~~~e~gg~~~~iV~~~ad~~~aa~~i~~~~~~~~Gq~C~a~~~i~v~~~~~~~~~~~L~~~l 263 (432)
T cd07078 185 TAVGKAIMRAAA-ENLKRVTLELGGKSPLIVFDDADLDAAVKGAVFGAFGNAGQVCTAASRLLVHESIYDEFVERLVERV 263 (432)
T ss_pred HHHHHHHHHHHh-hccCcEEEecCCCCeeEECCCCCHHHHHHHHHHHHHhccCCCccCCceEEEcHHHHHHHHHHHHHHH
Confidence 999999999988 7899999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hccccCCCCCCCCCccccCCHHHHHHHHHHHHHhhhcCCeEeeCCcccCC-CCceeeeEEEEeCCCCCcccccccccceE
Q 015031 240 KAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIGK-KGYYIEPTIFTNVTEDMLIAKNEIFGPVM 318 (414)
Q Consensus 240 ~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~~-~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl 318 (414)
+++++|+|.++++++||++++.+++++.++++++.++|+++++||..... .|+|++|||+.+++++++++++|+||||+
T Consensus 264 ~~~~~g~p~~~~~~~~~~~~~~~~~~~~~~i~~~~~~g~~~~~gg~~~~~~~g~~~~Ptv~~~~~~~~~~~~~E~fgPvl 343 (432)
T cd07078 264 KALKVGNPLDPDTDMGPLISAAQLDRVLAYIEDAKAEGAKLLCGGKRLEGGKGYFVPPTVLTDVDPDMPIAQEEIFGPVL 343 (432)
T ss_pred HccCcCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHhCCCEEEeCCccCCCCCCcEEccEEEecCCCCChhhhCCCcCceE
Confidence 99999999999999999999999999999999999999999999976532 58999999999999999999999999999
Q ss_pred EEeeeCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHHhccceeEEEECCcCCC-CCCCCccCCCCCCCCCcchHHHHHh
Q 015031 319 ALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSIRAGIIWINCYFAF-DSDCPYGGYKMSGFGRDCGLESLHN 397 (414)
Q Consensus 319 ~v~~~~~~~eai~~~n~~~~gl~~sv~s~d~~~~~~~~~~l~~g~v~vN~~~~~-~~~~pfgG~~~sG~g~~~g~~~~~~ 397 (414)
+|++|+++||||+++|+.++||++||||+|.+.++++++++++|+|+||+++.. .+.+||||.|.||+|+++|++|+++
T Consensus 344 ~v~~~~~~~eai~~~n~~~~~l~~~i~t~d~~~~~~~~~~~~~g~v~iN~~~~~~~~~~pfgG~~~sg~g~~~g~~~~~~ 423 (432)
T cd07078 344 PVIPFKDEEEAIELANDTEYGLAAGVFTRDLERALRVAERLEAGTVWINDYSVGAEPSAPFGGVKQSGIGREGGPYGLEE 423 (432)
T ss_pred EEEEeCCHHHHHHHHhCCCcCceEEEECCCHHHHHHHHHhcCcceEEECCCCCCCCCCCCcCCcCcCcCCccchHHHHHH
Confidence 999999999999999999999999999999999999999999999999998876 7899999999999999999999999
Q ss_pred hhcccEEE
Q 015031 398 YLQVKSVV 405 (414)
Q Consensus 398 ~~~~k~i~ 405 (414)
|++.|+++
T Consensus 424 ~~~~k~v~ 431 (432)
T cd07078 424 YTEPKTVT 431 (432)
T ss_pred hhceEEEE
Confidence 99999875
|
The aldehyde dehydrogenase family (ALDH) of NAD(P)+ dependent enzymes, in general, oxidize a wide range of endogenous and exogenous aliphatic and aromatic aldehydes to their corresponding carboxylic acids and play an important role in detoxification. Besides aldehyde detoxification, many ALDH isozymes possess multiple additional catalytic and non-catalytic functions such as participating in metabolic pathways, or as binding proteins, or as osmoregulants, to mention a few. The enzyme has three domains, a NAD(P)+ cofactor-binding domain, a catalytic domain, and a bridging domain; and the active enzyme is generally either homodimeric or homotetrameric. The catalytic mechanism is proposed to involve cofactor binding, resulting in a conformational change and activation of an invariant catalytic cysteine nucleophile. The cysteine and aldehyde substrate form an oxyanion thiohemiacetal intermediate resulting in hydride transfer |
| >PRK11905 bifunctional proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.1e-77 Score=650.78 Aligned_cols=393 Identities=31% Similarity=0.478 Sum_probs=365.0
Q ss_pred CHHHHHHHHHhHHHHHHHHHHHcCCChHHHhhccHHHHHHHHHHHHHhhhhhcCceeccccCccccccccCCcEEEEEcC
Q 015031 1 MLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMSRALQGYTLREPIGVVGHIIP 80 (414)
Q Consensus 1 L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p 80 (414)
|+++++.|++++++|++++++|+||+..++ ..|+..+++.+++++..+++... ...++|+|||++|+|
T Consensus 618 L~raAdll~~~~~eL~~l~~~E~GKt~~ea-~~Ev~eaid~lr~ya~~a~~~~~-----------~~~~~P~GVv~~IsP 685 (1208)
T PRK11905 618 LERAADLMEAHMPELFALAVREAGKTLANA-IAEVREAVDFLRYYAAQARRLLN-----------GPGHKPLGPVVCISP 685 (1208)
T ss_pred HHHHHHHHHHhHHHHHHHHHHHhCCCHHHH-HHHHHHHHHHHHHHHHHHHHhcC-----------CceecCccEEEEEcC
Confidence 578999999999999999999999999975 67999999999999988765421 235789999999999
Q ss_pred CCcChHhhHHHHHHHHhcCCeEEEecCCCChhHHHHHHHHHHHcCCCCCeEEEEcCCchhHHHHHHhCCCcCeEEEeCCH
Q 015031 81 WNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGST 160 (414)
Q Consensus 81 ~n~P~~~~~~~~~~ALaaGN~vv~kps~~~~~~~~~l~~~~~~aglp~g~v~~~~~~~~~~~~~l~~~~~~~~v~~tGs~ 160 (414)
||||+...++++++||++||+||+|||+.+|+++..+.++|.++|+|+|++|+++|++.+++..|+.||+++.|.||||+
T Consensus 686 wNfPlai~~g~i~aALaaGN~VV~KPse~tpl~a~~l~~ll~eAGlP~gvl~lV~G~g~~vg~~Lv~~p~v~~V~FTGSt 765 (1208)
T PRK11905 686 WNFPLAIFTGQIAAALVAGNTVLAKPAEQTPLIAARAVRLLHEAGVPKDALQLLPGDGRTVGAALVADPRIAGVMFTGST 765 (1208)
T ss_pred CcCHHHHHHHHHHHHHHcCCEEEEeCCcccHHHHHHHHHHHHHcCCCcccEEEeeCCchHHHHHHHcCCCcCEEEEeCCH
Confidence 99999999999999999999999999999999999999999999999999999999887899999999999999999999
Q ss_pred HHHHHHHHHHhhC--CCCceeeeCCCCCceeecCCCCHHHHHHHHHHHHhcccCCccccCcEEEEeCccHHHHHHHHHHH
Q 015031 161 DVGRQVMQAAATS--NLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEK 238 (414)
Q Consensus 161 ~~~~~i~~~~~~~--~~~~~~~e~gG~~~~iV~~dadl~~a~~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f~~~l~~~ 238 (414)
++++.|.+.++.. +.+|+++|+|||||+||++|||++.|++.+++|+|.++||.|++++++|||++++|+|+++|+++
T Consensus 766 ~vg~~I~~~~A~~~~~~~pli~ElGGkN~~IV~~dAdle~Av~~iv~saF~~aGQ~CsA~~rl~V~~si~d~f~e~L~~~ 845 (1208)
T PRK11905 766 EVARLIQRTLAKRSGPPVPLIAETGGQNAMIVDSSALPEQVVADVIASAFDSAGQRCSALRVLCLQEDVADRVLTMLKGA 845 (1208)
T ss_pred HHHHHHHHHHHhhcCCCCeEEEecCCcCeEEEcCCCCHHHHHHHHHHHHHhcCCCccccCcEEEEehhHHHHHHHHHHHH
Confidence 9999999988732 25899999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhccccCCCCCCCCCccccCCHHHHHHHHHHHHHhhhcCCeEeeCCcccC-CCCceeeeEEEEeCCCCCcccccccccce
Q 015031 239 AKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIG-KKGYYIEPTIFTNVTEDMLIAKNEIFGPV 317 (414)
Q Consensus 239 ~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~-~~g~~~~Ptvl~~~~~~~~~~~~E~fgPv 317 (414)
++++++|+|.+.++++||+|++.+++++.++|+++++.|+.++.++.... .+|+|+.|||+.. +++.++++|+||||
T Consensus 846 ~~~l~vGdP~d~~t~~GPvId~~a~~~i~~~I~~a~~~G~~l~~g~~~~~~~~G~fv~PTVl~~--~~~~~~~eEiFGPV 923 (1208)
T PRK11905 846 MDELRIGDPWRLSTDVGPVIDAEAQANIEAHIEAMRAAGRLVHQLPLPAETEKGTFVAPTLIEI--DSISDLEREVFGPV 923 (1208)
T ss_pred HHHhcCCCchhccCCccCccCHHHHHHHHHHHHHHHHCCCEEEEccCCCCCCCCeEEeeEEEec--CChHHhcCCccCce
Confidence 99999999999999999999999999999999999999988887764322 4699999999973 57888999999999
Q ss_pred EEEeeeC--CHHHHHHHHhcCCCCceEEEecCCHHHHHHHHhccceeEEEECCcCCC--CCCCCccCCCCCCCC-CcchH
Q 015031 318 MALMKFK--TVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSIRAGIIWINCYFAF--DSDCPYGGYKMSGFG-RDCGL 392 (414)
Q Consensus 318 l~v~~~~--~~~eai~~~n~~~~gl~~sv~s~d~~~~~~~~~~l~~g~v~vN~~~~~--~~~~pfgG~~~sG~g-~~~g~ 392 (414)
++|++|+ ++||+|+++|+++|||+++|||+|.+.++++++++++|+|+||+..+. ...+||||+|.||+| ..+|+
T Consensus 924 L~V~~y~~~dldeaI~~iN~t~yGLt~~I~S~d~~~~~~~~~~l~aGnvyIN~~~~ga~vg~qPFGG~~~SG~G~kaGGp 1003 (1208)
T PRK11905 924 LHVVRFKADELDRVIDDINATGYGLTFGLHSRIDETIAHVTSRIRAGNIYVNRNIIGAVVGVQPFGGEGLSGTGPKAGGP 1003 (1208)
T ss_pred EEEEEeCCCCHHHHHHHHhcCCCCceEEEEcCCHHHHHHHHHhCCEeEEEECCCCCCCccCCCCCCCCCCCCCCCcCCCH
Confidence 9999997 699999999999999999999999999999999999999999987653 356899999999999 48999
Q ss_pred HHHHhhhcccEEEEe
Q 015031 393 ESLHNYLQVKSVVTP 407 (414)
Q Consensus 393 ~~~~~~~~~k~i~~~ 407 (414)
+++.+|+++|+++.+
T Consensus 1004 ~~L~~f~~~k~v~~~ 1018 (1208)
T PRK11905 1004 LYLGRLVREAPTPIP 1018 (1208)
T ss_pred HHHHHHhhcceeecc
Confidence 999999999998765
|
|
| >cd07129 ALDH_KGSADH Alpha-Ketoglutaric Semialdehyde Dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.3e-76 Score=593.52 Aligned_cols=390 Identities=24% Similarity=0.319 Sum_probs=347.1
Q ss_pred CHHHHHHHHHhHHHHHHHHHHHcCCChHHHhhccHHHHHHHHHHHHHhhhhhc--Cceecc-------ccCccccccccC
Q 015031 1 MLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIH--GEVLKM-------SRALQGYTLREP 71 (414)
Q Consensus 1 L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~~~~~~--~~~~~~-------~~~~~~~~~~~P 71 (414)
|+++++.|++++++|++++++|+|||..+. ..|+..+++.+++++..+++.. +..... ..+...+.+++|
T Consensus 27 L~~~a~~l~~~~~ela~~~~~e~Gkp~~~~-~~ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P 105 (454)
T cd07129 27 LEAIADEIEALGDELVARAHAETGLPEARL-QGELGRTTGQLRLFADLVREGSWLDARIDPADPDRQPLPRPDLRRMLVP 105 (454)
T ss_pred HHHHHHHHHHhHHHHHHHHHHHcCCChHHH-HHHHHHHHHHHHHHHHHHHhcCCccccccccccccCCCCCccceEEeec
Confidence 578999999999999999999999999864 5799999999999998765421 111110 012345788999
Q ss_pred CcEEEEEcCCCcChHh--hHHHHHHHHhcCCeEEEecCCCChhHHHHHHHHH----HHcCCCCCeEEEEcCCchhHHHHH
Q 015031 72 IGVVGHIIPWNFPTTM--FFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLA----KLAGVPDGVLNVVPGFGPTAGAAI 145 (414)
Q Consensus 72 ~Gvv~~i~p~n~P~~~--~~~~~~~ALaaGN~vv~kps~~~~~~~~~l~~~~----~~aglp~g~v~~~~~~~~~~~~~l 145 (414)
+|||++|+|||||+.. .++++++||++||+||+|||+.+|.++.++.+++ .++|+|+|++|++++++.+.+..|
T Consensus 106 ~GvV~~I~p~N~P~~~~~~~~~~a~ALaaGN~VVlKps~~~p~t~~~l~~~~~~~l~~aGlP~gvv~~v~g~~~~~~~~L 185 (454)
T cd07129 106 LGPVAVFGASNFPLAFSVAGGDTASALAAGCPVVVKAHPAHPGTSELVARAIRAALRATGLPAGVFSLLQGGGREVGVAL 185 (454)
T ss_pred cceEEEECCCCCchhhhhhhhhHHHHHHcCCeEEEEcCCCCchHHHHHHHHHHHHHHHhCCChhheEEeeCCcHHHHHHH
Confidence 9999999999999987 4589999999999999999999999999988776 589999999999999776789999
Q ss_pred HhCCCcCeEEEeCCHHHHHHHHHHHhhC-CCCceeeeCCCCCceeecCCC---CHHHHHHHHHHHHhcccCCccccCcEE
Q 015031 146 ASHMDIDKVSFTGSTDVGRQVMQAAATS-NLKPVSLELGGKSPLLIFDDV---DVNTAADMALLGILFNKGEICVASSRV 221 (414)
Q Consensus 146 ~~~~~~~~v~~tGs~~~~~~i~~~~~~~-~~~~~~~e~gG~~~~iV~~da---dl~~a~~~i~~~~~~~~Gq~C~a~~~v 221 (414)
+.|+.++.|.||||+.+|+.|.+.++.+ .++|+++|+||+||+||++|+ |++.|++.+++++|.|+||.|++++||
T Consensus 186 ~~~~~v~~V~fTGs~~~G~~i~~~aa~~~~~~p~~lElGG~n~~iV~~da~~~dl~~aa~~i~~~~~~~~GQ~C~a~~rv 265 (454)
T cd07129 186 VKHPAIKAVGFTGSRRGGRALFDAAAARPEPIPFYAELGSVNPVFILPGALAERGEAIAQGFVGSLTLGAGQFCTNPGLV 265 (454)
T ss_pred hcCCCccEEEEeCChHHHHHHHHHhhccCccceeEeecCCcCcEEEeCCcchHHHHHHHHHHHHHHhcCCCCeecCCceE
Confidence 9999999999999999999999988732 689999999999999999999 899999999999999999999999999
Q ss_pred EEeCc-cHHHHHHHHHHHHhccccCCCCCCCCCccccCCHHHHHHHHHHHHHhhhc-CCeEeeCCcccCCCCceeeeEEE
Q 015031 222 YVQEG-IYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKRE-GATLLTGGKPIGKKGYYIEPTIF 299 (414)
Q Consensus 222 ~V~~~-~~~~f~~~l~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~-ga~v~~gg~~~~~~g~~~~Ptvl 299 (414)
|||++ ++|+|+++|+++++++++| |++++...++..+.+++++++ |+++++||... .+|+|++|||+
T Consensus 266 ~v~~~~i~d~f~~~l~~~~~~~~~g----------~~~~~~~~~~~~~~i~~a~~~~ga~~l~gg~~~-~~g~~~~Ptvl 334 (454)
T cd07129 266 LVPAGPAGDAFIAALAEALAAAPAQ----------TMLTPGIAEAYRQGVEALAAAPGVRVLAGGAAA-EGGNQAAPTLF 334 (454)
T ss_pred EEeCcccHHHHHHHHHHHHhccCCC----------CCcChHHHHHHHHHHHHHHhcCCcEEEeCCCcC-CCCCccCCEEE
Confidence 99999 9999999999999998654 666777777788888888888 99999999754 37899999999
Q ss_pred EeCC---CCCcccccccccceEEEeeeCCHHHHHHHHhcCCCCceEEEecCC--HHHHHHHHhcc--ceeEEEECCcCCC
Q 015031 300 TNVT---EDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKD--LNVANTVSRSI--RAGIIWINCYFAF 372 (414)
Q Consensus 300 ~~~~---~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~sv~s~d--~~~~~~~~~~l--~~g~v~vN~~~~~ 372 (414)
...+ ++|+++++|+||||++|++|+|.||||+++|++++||++||||+| .+.+++++++| ++|+|+||+++..
T Consensus 335 ~~~~~~~~~~~i~~~E~FGPv~~v~~~~~~~eai~~~n~~~~gL~a~vft~d~~~~~a~~~~~~l~~~~G~v~iN~~~~~ 414 (454)
T cd07129 335 KVDAAAFLADPALQEEVFGPASLVVRYDDAAELLAVAEALEGQLTATIHGEEDDLALARELLPVLERKAGRLLFNGWPTG 414 (454)
T ss_pred EccCCccccchhhcccCCCCeEEEEEeCCHHHHHHHHhcCCCCcEEEEEccCchHHHHHHHHHHHHhhCcEEEECCCCcc
Confidence 8655 689999999999999999999999999999999999999999999 79999999999 6999999987542
Q ss_pred C---CCCCccC-CCCCCCCCc--chHHHHHhhhccc
Q 015031 373 D---SDCPYGG-YKMSGFGRD--CGLESLHNYLQVK 402 (414)
Q Consensus 373 ~---~~~pfgG-~~~sG~g~~--~g~~~~~~~~~~k 402 (414)
. +.+|||| +|.||.|++ +|.+++++||++.
T Consensus 415 ~~~~~~~pfgG~~k~sg~g~~~~~g~~~~~~~~~~~ 450 (454)
T cd07129 415 VEVCPAMVHGGPYPATTDPRFTSVGTAAIERFLRPV 450 (454)
T ss_pred ccccCCCCCCCCcCCCCCCccccccHHHHHHhcccc
Confidence 2 4889999 999999998 7999999999973
|
Alpha-Ketoglutaric Semialdehyde (KGSA) Dehydrogenase (KGSADH, EC 1.2.1.26) catalyzes the NAD(P)+-dependent conversion of KGSA to alpha-ketoglutarate. This CD contains such sequences as those seen in Azospirillum brasilense, KGSADH-II (D-glucarate/D-galactarate-inducible) and KGSADH-III (hydroxy-L-proline-inducible). Both show similar high substrate specificity for KGSA and different coenzyme specificity; KGSADH-II is NAD+-dependent and KGSADH-III is NADP+-dependent. Also included in this CD is the NADP(+)-dependent aldehyde dehydrogenase from Vibrio harveyi which catalyzes the oxidation of long-chain aliphatic aldehydes to acids. |
| >cd07084 ALDH_KGSADH-like ALDH subfamily: NAD(P)+-dependent alpha-ketoglutaric semialdehyde dehydrogenases and plant delta(1)-pyrroline-5-carboxylate dehydrogenase, ALDH family 12-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-75 Score=588.15 Aligned_cols=389 Identities=22% Similarity=0.261 Sum_probs=347.8
Q ss_pred CHHHHHHHHHhHHHHHHHHHHHcCCChHHHhhccHHHHHHHHHHHHHhhhhh--cCcee-ccc--cCccccccccCCcEE
Q 015031 1 MLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKI--HGEVL-KMS--RALQGYTLREPIGVV 75 (414)
Q Consensus 1 L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~~~~~--~~~~~-~~~--~~~~~~~~~~P~Gvv 75 (414)
|+++++.|++|+++|++++++|+|||. +. ..|+..+++.+++++..+... .+... ... .+...+.+++|+|||
T Consensus 27 L~~~a~~l~~~~~ela~~~~~e~Gk~~-~~-~~ev~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv 104 (442)
T cd07084 27 LARIIQRLAAKSYDIAAGAVLVTGKGW-MF-AENICGDQVQLRARAFVIYSYRIPHEPGNHLGQGLKQQSHGYRWPYGPV 104 (442)
T ss_pred HHHHHHHHHhhHHHHHHHHHHHcCCch-hh-hhhhcchHHHHHHHHHHHHhccccccccccCCCCccccceEEeecceeE
Confidence 578999999999999999999999999 44 469999999999998877543 11111 111 234578899999999
Q ss_pred EEEcCCCcChHhhHHHHHHHHhcCCeEEEecCCCChhHHHHHHHHHHHcCC-CCCeEEEEcCCchhHHHHHHhCCCcCeE
Q 015031 76 GHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGV-PDGVLNVVPGFGPTAGAAIASHMDIDKV 154 (414)
Q Consensus 76 ~~i~p~n~P~~~~~~~~~~ALaaGN~vv~kps~~~~~~~~~l~~~~~~agl-p~g~v~~~~~~~~~~~~~l~~~~~~~~v 154 (414)
++|+|||||+...++++++||++||+||+|||+.+|.++..+.+++.++|+ |+++++++++++. .+..|+.|++++.|
T Consensus 105 ~~I~p~N~P~~~~~~~~~~AL~aGN~vvlKps~~~p~~~~~l~~~l~~ag~~P~g~~~~v~g~~~-~~~~l~~~~~v~~V 183 (442)
T cd07084 105 LVIGAFNFPLWIPLLQLAGALAMGNPVIVKPHTAVSIVMQIMVRLLHYAGLLPPEDVTLINGDGK-TMQALLLHPNPKMV 183 (442)
T ss_pred EEEcCCccHhHHHHHHHHHHHHcCCeEEEECCCCchHHHHHHHHHHHHhCCCCccceEEeeCCcH-HHHHHHcCCCCCEE
Confidence 999999999999999999999999999999999999999999999999998 9999999999765 88999999999999
Q ss_pred EEeCCHHHHHHHHHHHhhCCCCceeeeCCCCCceeecCCC-CHHHHHHHHHHHHhcccCCccccCcEEEEeCc-cHHHHH
Q 015031 155 SFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDV-DVNTAADMALLGILFNKGEICVASSRVYVQEG-IYDEFE 232 (414)
Q Consensus 155 ~~tGs~~~~~~i~~~~~~~~~~~~~~e~gG~~~~iV~~da-dl~~a~~~i~~~~~~~~Gq~C~a~~~v~V~~~-~~~~f~ 232 (414)
.||||+++++.|.+.++ . +|+++|+||+||+||++|| |++.+++.+++++|.|+||.|++++++|||++ ++++|+
T Consensus 184 ~fTGs~~~g~~i~~~a~-~--~~v~lElgG~~~~iV~~dadd~~~a~~~i~~~~~~~~GQ~C~a~~rl~V~~~~i~~~f~ 260 (442)
T cd07084 184 LFTGSSRVAEKLALDAK-Q--ARIYLELAGFNWKVLGPDAQAVDYVAWQCVQDMTACSGQKCTAQSMLFVPENWSKTPLV 260 (442)
T ss_pred EEECCHHHHHHHHHhcc-C--CcEEEeccCcCcEEECCChhhHHHHHHHHHHHHhcccCCeecCCcEEEEeCCccHHHHH
Confidence 99999999999999875 3 8999999999999999999 69999999999999999999999999999999 999999
Q ss_pred HHHHHHHhccccCCCCCCCCCccccCCHHHHHHHHHHHHHhhhc-CCeEeeCCcccC------CCCceeeeEEEEeCCCC
Q 015031 233 KKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKRE-GATLLTGGKPIG------KKGYYIEPTIFTNVTED 305 (414)
Q Consensus 233 ~~l~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~-ga~v~~gg~~~~------~~g~~~~Ptvl~~~~~~ 305 (414)
++|++.++++++| ++.+||++++. +.++++++.++ |+++++||.... ..|+|++|||+.+++++
T Consensus 261 ~~l~~~~~~~~~g-----~~~~gpl~~~~----~~~~i~~a~~~gga~~~~gg~~~~~~~~~~~~g~~~~Ptvl~~~~~~ 331 (442)
T cd07084 261 EKLKALLARRKLE-----DLLLGPVQTFT----TLAMIAHMENLLGSVLLFSGKELKNHSIPSIYGACVASALFVPIDEI 331 (442)
T ss_pred HHHHHHHHhcccC-----ccccChhhhHH----HHHHHHHHHhcCCcEEEeCCcccccCCCCCcCCcccCCeEEEecCcc
Confidence 9999999999988 67899997764 45556666777 589999997532 25899999999999999
Q ss_pred C---cccccccccceEEEeeeCC--HHHHHHHHhcCCCCceEEEecCCHHHHHHHHhcc-ceeEEEECCc-CC-CCCCCC
Q 015031 306 M---LIAKNEIFGPVMALMKFKT--VEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSI-RAGIIWINCY-FA-FDSDCP 377 (414)
Q Consensus 306 ~---~~~~~E~fgPvl~v~~~~~--~~eai~~~n~~~~gl~~sv~s~d~~~~~~~~~~l-~~g~v~vN~~-~~-~~~~~p 377 (414)
| ++++||+||||++|++|+| .+||++++|++++||++||||+|.+.++++++++ ++|+|+||+. +. ..+..|
T Consensus 332 ~~~~~i~~eE~FGPvl~v~~~~~~~~~eai~~~n~~~~gL~~~v~t~d~~~~~~~~~~l~~~G~v~iN~~~~~~~~~~~~ 411 (442)
T cd07084 332 LKTYELVTEEIFGPFAIVVEYKKDQLALVLELLERMHGSLTAAIYSNDPIFLQELIGNLWVAGRTYAILRGRTGVAPNQN 411 (442)
T ss_pred cccchHHheeccCceEEEEEeCCccHHHHHHHHHhCCCCeeEEEEeCCHHHHHHHHHHHHhcCeEEECCCCCCCcccccc
Confidence 7 9999999999999999999 9999999999999999999999999999999999 9999999976 23 445678
Q ss_pred ccC-CCCCCCCCcc-hHHHHHhhhcccEE
Q 015031 378 YGG-YKMSGFGRDC-GLESLHNYLQVKSV 404 (414)
Q Consensus 378 fgG-~~~sG~g~~~-g~~~~~~~~~~k~i 404 (414)
||| .|.||+|+.. |.+++++||++..+
T Consensus 412 ~gG~~k~sG~g~~~~g~~~~~~~~~~~~~ 440 (442)
T cd07084 412 HGGGPAADPRGAGIGGPEAIKLVWRCHAE 440 (442)
T ss_pred CCCCCCCCCCCccccchHHhhheeeeeee
Confidence 876 8899999886 99999999998654
|
ALDH subfamily which includes the NAD(P)+-dependent, alpha-ketoglutaric semialdehyde dehydrogenases (KGSADH, EC 1.2.1.26); plant delta(1)-pyrroline-5-carboxylate dehydrogenase (P5CDH, EC=1.5.1.12 ), ALDH family 12; the N-terminal domain of the MaoC (monoamine oxidase C) dehydratase regulatory protein; and orthologs of MaoC, PaaZ and PaaN, which are putative ring-opening enzymes of the aerobic phenylacetic acid catabolic pathway. |
| >KOG2454 consensus Betaine aldehyde dehydrogenase [Energy production and conversion] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-74 Score=534.49 Aligned_cols=405 Identities=30% Similarity=0.543 Sum_probs=373.9
Q ss_pred CHHHHHHHHHhHHHHHHHHHHHcCCChHHHhhccHHHHHHHHHHHHHhhhhhcCc-eecc---ccCccccccccCCcEEE
Q 015031 1 MLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGE-VLKM---SRALQGYTLREPIGVVG 76 (414)
Q Consensus 1 L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~~~~~~~~-~~~~---~~~~~~~~~~~P~Gvv~ 76 (414)
|+.+.+.|.+|+|.+++..++||||+..+++.+|+.-+++.+.|.....++.... ..+. ..-+..++.++|+||+.
T Consensus 114 L~~L~~yIi~nQdliaevacrDtGKTmvDAs~GEIlvTlEKI~Wtl~~Ger~L~P~~Rpn~~~~~yKg~~v~yePLGVI~ 193 (583)
T KOG2454|consen 114 LRILLKYIIENQDLIAEVACRDTGKTMVDASLGEILVTLEKITWTLSEGERWLKPESRPNGRAMLYKGSRVEYEPLGVIG 193 (583)
T ss_pred HHHHHHHHhhchhheeeeeecccCchhhhhhHhHHHHHHHHhhhhhhcchhhcCCcCCCchhheeeccceEEEeecceEE
Confidence 4567788889999999999999999999999999999999999987766543322 1221 12355788999999999
Q ss_pred EEcCCCcChHhhHHHHHHHHhcCCeEEEecCCCChhHHHHHHHH----HHHcCCCCCeEEEEcCCchhHHHHHHhCCCcC
Q 015031 77 HIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHL----AKLAGVPDGVLNVVPGFGPTAGAAIASHMDID 152 (414)
Q Consensus 77 ~i~p~n~P~~~~~~~~~~ALaaGN~vv~kps~~~~~~~~~l~~~----~~~aglp~g~v~~~~~~~~~~~~~l~~~~~~~ 152 (414)
.|.|||||+.+.+.+++.||.+||.+|+|-|+.+.++.....++ |+..|-|++++|++++- ++.++.|.+|+.++
T Consensus 194 aiVsWNYPfHN~lgPiiaAlFsGNaIVvK~SE~~~WS~~fy~e~ir~~L~a~g~~p~LVq~itcl-pd~a~~ltSh~g~k 272 (583)
T KOG2454|consen 194 AIVSWNYPFHNILGPIIAALFSGNAIVVKVSEHASWSGCFYFEIIRAALAAVGAPPNLVQVITCL-PDTAEALTSHSGVK 272 (583)
T ss_pred EeeecCCchhhhhhHHHHHHhcCCeEEEEeecceeeehhhHHHHHHHHHHHcCCCcchhheeecC-cchHhHhhcCCCcc
Confidence 99999999999999999999999999999999999888765555 56669999999999983 47899999999999
Q ss_pred eEEEeCCHHHHHHHHHHHhhCCCCceeeeCCCCCceeecCCCCHHHHHHHHHHHHhcccCCccccCcEEEEeCccHHHHH
Q 015031 153 KVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFE 232 (414)
Q Consensus 153 ~v~~tGs~~~~~~i~~~~~~~~~~~~~~e~gG~~~~iV~~dadl~~a~~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f~ 232 (414)
++.|.||..+++.|++.++ +.++|+++|+|||+++||++|+|++..+.-++++.|..+||.|.+.+|++||+++||.|+
T Consensus 273 hitFiGSqpvak~i~~~AA-k~LTPv~lELGGKDafIi~dda~l~~v~si~mRGtfQSsGQNCiGiER~iv~k~~Yd~~i 351 (583)
T KOG2454|consen 273 HITFIGSQPVAKMIMRNAA-KTLTPVTLELGGKDAFIICDDADLSHVASIAMRGTFQSSGQNCIGIERFIVHKDIYDAFI 351 (583)
T ss_pred eEEEecCcHHHHHHHHhhh-hhcCcEEEeecCcccEEEeccccHHHHHHHHHhhhhhhcCCcccceeEEEEecchHHHHH
Confidence 9999999999999999988 899999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhccccCCCCCCCCCccccCCHHHHHHHHHHHHHhhhcCCeEeeCCcccC----CCCceeeeEEEEeCCCCCcc
Q 015031 233 KKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIG----KKGYYIEPTIFTNVTEDMLI 308 (414)
Q Consensus 233 ~~l~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~----~~g~~~~Ptvl~~~~~~~~~ 308 (414)
..|..+++.++.|.|.-...+||.+++..+++.++.+++||+++||++++||.+-. ..|.|++||++.+++++|++
T Consensus 352 ~~l~~rv~s~r~G~~~~~~vDMGAm~s~nrfdhLesLv~DAv~KGArl~~gGsrF~Hpkyp~g~YF~PTlLvdvt~eMKI 431 (583)
T KOG2454|consen 352 GQLTKRVKSVRAGPPLTGRVDMGAMCSQNRFDHLESLVNDAVDKGARLAVGGSRFGHPKYPVGQYFPPTLLVDVTHEMKI 431 (583)
T ss_pred HHHHHHHHHHHcCCCccCccchhhhhhccchHHHHHHHHHHHhhcchhhhcccccCCCCCCcccccCCeEEEecCchhhh
Confidence 99999999999999999999999999999999999999999999999999998642 47999999999999999999
Q ss_pred cccccccceEEEeeeCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHHhccceeEEEECCcCC-CCCCCCccCCCCCCCC
Q 015031 309 AKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSIRAGIIWINCYFA-FDSDCPYGGYKMSGFG 387 (414)
Q Consensus 309 ~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~sv~s~d~~~~~~~~~~l~~g~v~vN~~~~-~~~~~pfgG~~~sG~g 387 (414)
++||.||||++++++.+.|++++++|++++||++|||+.|..+++++++++++|.|.||+... ..-.+||||++.||+|
T Consensus 432 aqeE~FgPI~~im~ak~~eh~i~lAN~s~fgLG~sVFg~dk~~c~y~a~~lqtG~vAiNDFasfY~cQlPFGG~k~SGyG 511 (583)
T KOG2454|consen 432 AQEEAFGPIMPIMQAKTDEHVIKLANDSRFGLGCSVFGGDKHRCKYIASQLQTGVVAINDFASFYMCQLPFGGVKDSGYG 511 (583)
T ss_pred HhhhccccchhhhhcCChHHHHhhccCCcccccceeccccHHHHHHHHhhhhccceeehhhhhhheeccccCCccCCCcc
Confidence 999999999999999999999999999999999999999999999999999999999999876 3457999999999999
Q ss_pred CcchHHHHHhhhcccEEEEe
Q 015031 388 RDCGLESLHNYLQVKSVVTP 407 (414)
Q Consensus 388 ~~~g~~~~~~~~~~k~i~~~ 407 (414)
++.|.+|++..+..|+|.++
T Consensus 512 rFaG~EGLrg~Cn~Ksv~yd 531 (583)
T KOG2454|consen 512 RFAGIEGLRGCCNVKSVAYD 531 (583)
T ss_pred ccccHHHHHHHhcccceecc
Confidence 99999999999999999664
|
|
| >cd07121 ALDH_EutE Ethanolamine utilization protein EutE-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-73 Score=570.18 Aligned_cols=375 Identities=19% Similarity=0.233 Sum_probs=320.1
Q ss_pred CHHHHHHHHHhHHHHHHHHHHHcCCChHHHhhccHHHHHHHHHHHHHhhhhhcCc-ee-ccccCccccccccCCcEEEEE
Q 015031 1 MLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGE-VL-KMSRALQGYTLREPIGVVGHI 78 (414)
Q Consensus 1 L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~~~~~~~~-~~-~~~~~~~~~~~~~P~Gvv~~i 78 (414)
|+++++.|++|.++|++++++|+|||..++. ++.+++++......... .. ....+...+++++|+|||++|
T Consensus 32 L~~~a~~l~~~~~ela~~~~~E~Gk~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~PlGVV~~I 104 (429)
T cd07121 32 IEAIREALLSNAEELAEMAVEETGMGRVEDK-------IAKNHLAAEKTPGTEDLTTTAWSGDNGLTLVEYAPFGVIGAI 104 (429)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHCCCHHHHH-------HHHHHHHHHhcCcccccccccccCCCcceEEEEcccceEEEE
Confidence 5789999999999999999999999987542 34455554422111000 00 001123457788999999999
Q ss_pred cCCCcChHhhHHHHHHHHhcCCeEEEecCCCChhHHHHHHHHH----HHcCCCCCeEEEEcCCchhHHHHHHhCCCcCeE
Q 015031 79 IPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLA----KLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKV 154 (414)
Q Consensus 79 ~p~n~P~~~~~~~~~~ALaaGN~vv~kps~~~~~~~~~l~~~~----~~aglp~g~v~~~~~~~~~~~~~l~~~~~~~~v 154 (414)
+|||||+...++++++||++||+||+|||+.+|.++..+.+++ .++|+|+|++|++++++.+.++.|+.||++|.|
T Consensus 105 ~PwN~P~~~~~~~~~~ALaaGN~VVlKpse~tp~t~~~l~~l~~~~~~~aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~I 184 (429)
T cd07121 105 TPSTNPTETIINNSISMLAAGNAVVFNPHPGAKKVSAYAVELINKAIAEAGGPDNLVVTVEEPTIETTNELMAHPDINLL 184 (429)
T ss_pred ccCCCchhHHHHHHHHHHHcCCCEEEECCccchhHHHHHHHHHHHHHHHcCCCcceEEEecCCChHHHHHHHcCCCccEE
Confidence 9999999999999999999999999999999999999998887 478999999999998777789999999999999
Q ss_pred EEeCCHHHHHHHHHHHhhCCCCceeeeCCCCCceeecCCCCHHHHHHHHHHHHhcccCCccccCcEEEEeCccHHHHHHH
Q 015031 155 SFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKK 234 (414)
Q Consensus 155 ~~tGs~~~~~~i~~~~~~~~~~~~~~e~gG~~~~iV~~dadl~~a~~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f~~~ 234 (414)
.||||+.+|+.|.+. .+|+++|+|||||+||++|||++.|++.+++++|+|+||.|++++|+|||+++||+|+++
T Consensus 185 ~fTGs~~~g~~v~~~-----~k~~~lelGGk~p~iV~~dADld~Aa~~i~~~~~~n~GQ~C~a~~rv~V~~~i~d~f~~~ 259 (429)
T cd07121 185 VVTGGPAVVKAALSS-----GKKAIGAGAGNPPVVVDETADIEKAARDIVQGASFDNNLPCIAEKEVIAVDSVADYLIAA 259 (429)
T ss_pred EeeCCHHHHHHHHhC-----CCceEeecCCCceEEEecCCCHHHHHHHHHhcccccCCCCCCccceEEEeHHHHHHHHHH
Confidence 999999999999764 489999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhccccCCCCCCCCCccccCCHHHHHHHHHHHHHhhhc--CCeEeeCCccc---CCCCceee---eEEEEeCCCCC
Q 015031 235 LVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKRE--GATLLTGGKPI---GKKGYYIE---PTIFTNVTEDM 306 (414)
Q Consensus 235 l~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~--ga~v~~gg~~~---~~~g~~~~---Ptvl~~~~~~~ 306 (414)
|+++ . .++++..+++++.++++++... |+++++||... ...|.|+. |||+.+++++|
T Consensus 260 L~~~-~--------------~~~i~~~~~~~v~~~i~~a~~~~~ga~~~~gg~~~~~~~~~G~~~~~~~ptil~~v~~~~ 324 (429)
T cd07121 260 MQRN-G--------------AYVLNDEQAEQLLEVVLLTNKGATPNKKWVGKDASKILKAAGIEVPADIRLIIVETDKDH 324 (429)
T ss_pred HHHC-C--------------CEEcCHHHHHHHHHhhcccCCCccccccccCcCHHHHHHHcCCCCCCCCeEEEEecCCCC
Confidence 9886 1 1368999999999999999864 68999988641 12477877 59999999999
Q ss_pred cccccccccceEEEeeeCCHHHHHHHHhcCCCCc--eEEEecCCHHHHHHHHhccceeEEEECCcCCCCCCCCccCCCCC
Q 015031 307 LIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGL--AAGIMTKDLNVANTVSRSIRAGIIWINCYFAFDSDCPYGGYKMS 384 (414)
Q Consensus 307 ~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl--~~sv~s~d~~~~~~~~~~l~~g~v~vN~~~~~~~~~pfgG~~~s 384 (414)
++++||+||||++|++|+|+||||+++|+++||| +++|||+|.+.++++++++++|+|+||++.. +.+||||+|.|
T Consensus 325 ~i~~eE~FgPVl~v~~~~~~~eAi~~an~~~~GLghsa~I~t~d~~~a~~~a~~l~aG~v~iN~~~~--~~~p~gG~k~s 402 (429)
T cd07121 325 PFVVEEQMMPILPVVRVKNFDEAIELAVELEHGNRHTAIIHSKNVENLTKMARAMQTTIFVKNGPSY--AGLGVGGEGYT 402 (429)
T ss_pred CccccccccceEEEEEeCCHHHHHHHHHhhccCCCceEEEecCCHHHHHHHHhhCCceEEEEcCCCc--CccccCCCccc
Confidence 9999999999999999999999999999999998 9999999999999999999999999998754 67899999999
Q ss_pred CC--CCcc--hHHHHHhhhcccEE
Q 015031 385 GF--GRDC--GLESLHNYLQVKSV 404 (414)
Q Consensus 385 G~--g~~~--g~~~~~~~~~~k~i 404 (414)
++ |..- |.-+-++||+.+.+
T Consensus 403 ~~~~~~~~~~~~~~~~~~~~~~~~ 426 (429)
T cd07121 403 TFTIAGPTGEGLTSARTFTRRRRC 426 (429)
T ss_pred eEEecCCcCcCccChhhhheeeee
Confidence 98 4332 23333455554443
|
Coenzyme A acylating aldehyde dehydrogenase (ACDH), an NAD+ and CoA-dependent acetaldehyde dehydrogenase, acetylating (EC=1.2.1.10), converts acetaldehyde into acetyl-CoA. This CD is limited to such monofunctional enzymes as the Ethanolamine utilization protein, EutE, in Salmonella typhimurium. Mutations in eutE abolish the ability to utilize ethanolamine as a carbon source. |
| >TIGR02288 PaaN_2 phenylacetic acid degradation protein paaN | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-72 Score=571.68 Aligned_cols=372 Identities=19% Similarity=0.242 Sum_probs=321.3
Q ss_pred CHHHHHHHHHhHHHHHHHHHHHcCCChHHHhh-c---cHHHHHHHHHHHHHhhhhhcCceec---cc-cCc---cccccc
Q 015031 1 MLKFADLIEEHAEVLAVLEALDAGKLHSWAKM-G---DIPGAANTLRYYAGAADKIHGEVLK---MS-RAL---QGYTLR 69 (414)
Q Consensus 1 L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~~~~-~---ev~~~~~~l~~~~~~~~~~~~~~~~---~~-~~~---~~~~~~ 69 (414)
|+++++.|++|+++|+++++.|+|||..++.. + ++.+.++.+++++..+.+..+.... .. .+. ..+..+
T Consensus 112 L~~~a~~l~~~~~elA~~~~~etGk~~~~a~e~gkp~~~~r~i~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~ 191 (551)
T TIGR02288 112 CLEILQRLNARSFEIAHAVMHTTGQAFMMAFQAGGPHAQDRGLEAVAYAYREMSRIPETAVWEKPQGKNDPLKLKKRFTI 191 (551)
T ss_pred HHHHHHHHHHCHHHHHHHHHHHhCCCHHHHHhccChHHHHHHHHHHHHHHHHHHhccCcccccccCCCCCcccccceEEE
Confidence 57899999999999999999999999986522 1 7788899999998887766554321 11 111 122368
Q ss_pred cCCcEEEEEcCCCcChHhhHHHHHHHHhcCCeEEEecCCCChhHHH----HHHHHHHHcCCCCCeEEEEcCC-chhHHHH
Q 015031 70 EPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIAL----YFAHLAKLAGVPDGVLNVVPGF-GPTAGAA 144 (414)
Q Consensus 70 ~P~Gvv~~i~p~n~P~~~~~~~~~~ALaaGN~vv~kps~~~~~~~~----~l~~~~~~aglp~g~v~~~~~~-~~~~~~~ 144 (414)
+|+|||++|+|||||+++.++++++||++||+||+|||+.+|+++. .+.+++.++|+|+|++|++++. +.++++.
T Consensus 192 ~P~GVv~vI~PwNfP~~~~~~~l~~ALaaGN~VVlKPs~~tpl~~~~~~~~l~e~l~eAGlP~gvv~lv~g~~g~~~~~~ 271 (551)
T TIGR02288 192 VPRGIALVIGCSTFPTWNTYPGLFASLATGNPVLVKPHPGAILPLALTVQVAREVLGEAGFDPNLVTLAAFDPGHEAAQR 271 (551)
T ss_pred EecCeEEEEcCcccHHHHHHHHHHHHHHcCCeEEEECCcccchhHHHHHHHHHHHHHHcCcChhHEEEecCCCcHHHHHH
Confidence 9999999999999999999999999999999999999999998654 6779999999999999999985 6788999
Q ss_pred HHhCCCcCeEEEeCCHHHHHHHHHHHhhCCCCceeeeCCCCCceeecCCCCHHHHHHHHHHHHhcccCCccccCcEEEEe
Q 015031 145 IASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQ 224 (414)
Q Consensus 145 l~~~~~~~~v~~tGs~~~~~~i~~~~~~~~~~~~~~e~gG~~~~iV~~dadl~~a~~~i~~~~~~~~Gq~C~a~~~v~V~ 224 (414)
|+.||.++.|.||||+++|+.|.+.++ .+++++|+|||||+||++|+|++.+++.+++++|.|+||.|++++|+|||
T Consensus 272 L~~~p~v~~I~FTGSt~~G~~I~~~aa---~~~v~lElGGknp~IV~~dADld~aa~~i~~~~f~~sGQ~Cta~~ri~V~ 348 (551)
T TIGR02288 272 LATDPAVRIIDFTGSNAFGQWLEQNAR---QAQVYTEKAGVNTVIIESTDDYKAMLRNLAFSLSLYSGQMCTTTQAILVP 348 (551)
T ss_pred HHhCCCccEEEEECCHHHHHHHHHhcc---cCcEEeecCCcCeEEEcCCCCHHHHHHHHHHHHHhhCCCCCCCCCEEEEe
Confidence 999999999999999999999998865 47999999999999999999999999999999999999999999999999
Q ss_pred Cc---------cHHHHHHHHHHHHhccccCCCCCCCCCccccCCHHHHHHHHHHHHHhhhcCCeEeeCCcccC---CCC-
Q 015031 225 EG---------IYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIG---KKG- 291 (414)
Q Consensus 225 ~~---------~~~~f~~~l~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~---~~g- 291 (414)
++ +||+|+++|+++++++ +|+|.++.+++||++++.+++++ +++++.| ++++||.... .+|
T Consensus 349 ~~~i~~~~g~~i~def~~~L~~~~~~l-vGdp~~~~~~~Gplis~~~~~ri----~~a~~~G-~v~~gG~~~~~~~~~g~ 422 (551)
T TIGR02288 349 RDGIRTDQGRKSYDEVAADLATAIDGL-LGDPARATAVLGAIQSPDTLARI----AEARALG-EVLLASTKIEHPEFPGA 422 (551)
T ss_pred ccccccccchhHHHHHHHHHHHHHHHh-cCCcccccccccCcCCHHHHHHH----HHHHhCC-CEEEcCccCCCCCCCCC
Confidence 99 7999999999999999 99999999999999999999996 4556677 6666665431 134
Q ss_pred ceeeeEEEEeCCCCCcccccccccceEEEeeeCCHHHHHHHHhcC--CCC-ceEEEecCCHHHHHHHHhcc---------
Q 015031 292 YYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNT--RYG-LAAGIMTKDLNVANTVSRSI--------- 359 (414)
Q Consensus 292 ~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~--~~g-l~~sv~s~d~~~~~~~~~~l--------- 359 (414)
+|++|||+...+++|++++||+||||++|++|+|.||||+++|++ ++| |++||||+|.+.++++.+++
T Consensus 423 ~~~~Ptvl~~~~~d~~i~~eE~FGPVl~V~~~~d~deAi~~aN~~~~~~G~Lta~VfT~d~~~~~~~~~~~~~~~~~l~i 502 (551)
T TIGR02288 423 RVRTPLLLKCDAADEAAYMQERFGPIAFVVAVDDGAHAVELARRSVREKGAMTVGAYTTDPEVVDAVQEAAWDAAVALSL 502 (551)
T ss_pred EEeccEEEEcCCCCCHHHhCCCcCCEEEEEEECCHHHHHHHHhcCCCCCCCceEEEEeCCHHHHHHHHHHHHHhccCeee
Confidence 688999995444599999999999999999999999999999998 566 99999999999999999999
Q ss_pred -ceeEEEECCcCCCCCCCCccCCCCCCCC
Q 015031 360 -RAGIIWINCYFAFDSDCPYGGYKMSGFG 387 (414)
Q Consensus 360 -~~g~v~vN~~~~~~~~~pfgG~~~sG~g 387 (414)
++|.|+||+.. +|++.+.||..
T Consensus 503 N~~G~v~vN~~~------~~~~~~~sg~n 525 (551)
T TIGR02288 503 NLTGGVFVNQSA------AFSDFHGTGGN 525 (551)
T ss_pred cCCceEEEccCC------CCCCCCCCCCC
Confidence 77777777654 45555555554
|
This family includes sequences from Burkholderia, Bordetella, Streptomyces. Other PaaN enzymes are represented by a separate model, TIGR02278. |
| >cd07081 ALDH_F20_ACDH_EutE-like Coenzyme A acylating aldehyde dehydrogenase (ACDH), Ethanolamine utilization protein EutE, and related proteins | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.3e-73 Score=564.91 Aligned_cols=382 Identities=19% Similarity=0.232 Sum_probs=321.3
Q ss_pred CHHHHHHHHHhHHHHHHHHHHHcCCChHHHhhccHHHHHH--HHHHHHHhhhhhcCceeccccCccccccccCCcEEEEE
Q 015031 1 MLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAAN--TLRYYAGAADKIHGEVLKMSRALQGYTLREPIGVVGHI 78 (414)
Q Consensus 1 L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~--~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i 78 (414)
|+++++.|++|+++|++++++|+|||..++. .++..... ..++++. ...+...+...+...+.+++|+|||++|
T Consensus 27 L~~~a~~l~~~~~ela~~~~~E~Gk~~~ea~-~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~P~GVV~~I 102 (439)
T cd07081 27 FRAAAEAAEDARIDLAKLAVSETGMGRVEDK-VIKNHFAAEYIYNVYKD---EKTCGVLTGDENGGTLIIAEPIGVVASI 102 (439)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCChHHHH-HHHHHHHHHHHHHHHhc---cccCceecCCCCCceEEEEecceEEEEE
Confidence 5789999999999999999999999998753 35544433 2222221 1222222222234467899999999999
Q ss_pred cCCCcChHhhHHHHHHHHhcCCeEEEecCCCChhHHHHHHHHHH----HcCCCCCeEEEEcCCchhHHHHHHhCCCcCeE
Q 015031 79 IPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAK----LAGVPDGVLNVVPGFGPTAGAAIASHMDIDKV 154 (414)
Q Consensus 79 ~p~n~P~~~~~~~~~~ALaaGN~vv~kps~~~~~~~~~l~~~~~----~aglp~g~v~~~~~~~~~~~~~l~~~~~~~~v 154 (414)
+|||||+...++++++||++||+||+|||+.+|.++..+.+++. ++|+|+|++|++++.+.+.++.|+.||++++|
T Consensus 103 ~PwN~P~~~~~~~~~~ALaaGN~VVlKPs~~tp~~~~~l~~l~~~~l~~aG~P~gvv~~v~g~~~~~g~~L~~~~~V~~V 182 (439)
T cd07081 103 TPSTNPTSTVIFKSLISLKTRNSIIFSPHPRAKKVTQRAATLLLQAAVAAGAPENLIGWIDNPSIELAQRLMKFPGIGLL 182 (439)
T ss_pred CCCcchHHHHHHHHHHHHhcCCeEEEECCccchHHHHHHHHHHHHHHHHcCCChhhEEEEcCCCHHHHHHHHcCCCCCEE
Confidence 99999999999999999999999999999999999988888774 78999999999998777889999999999999
Q ss_pred EEeCCHHHHHHHHHHHhhCCCCceeeeCCCCCceeecCCCCHHHHHHHHHHHHhcccCCccccCcEEEEeCccHHHHHHH
Q 015031 155 SFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKK 234 (414)
Q Consensus 155 ~~tGs~~~~~~i~~~~~~~~~~~~~~e~gG~~~~iV~~dadl~~a~~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f~~~ 234 (414)
.||||++. .+.++ ++++|+++|+|||+|+||++|||++.|++.+++++|+|+||.|++.+|+|||+++||+|+++
T Consensus 183 ~FTGs~~v----~~~aa-~~~k~~~lElGGk~p~IV~~dADl~~Aa~~iv~~~~~~~GQ~C~a~~rv~V~~~i~d~f~~~ 257 (439)
T cd07081 183 LATGGPAV----VKAAY-SSGKPAIGVGAGNTPVVIDETADIKRAVQSIVKSKTFDNGVICASEQSVIVVDSVYDEVMRL 257 (439)
T ss_pred EEECCHHH----HHHHH-hcCCCEEEEcCCCCeEEEcCCCCHHHHHHHHHHHHhcCCCCCCCCCCEEEEcHHHHHHHHHH
Confidence 99999973 44555 77899999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhccccCCCCCCCCCccccCCHHHHHHHHHHHHHhhhcCCeEeeCCc-c-cCCCCceeeeE---EEEeCC--CCCc
Q 015031 235 LVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGK-P-IGKKGYYIEPT---IFTNVT--EDML 307 (414)
Q Consensus 235 l~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ga~v~~gg~-~-~~~~g~~~~Pt---vl~~~~--~~~~ 307 (414)
|+++. ||+++.++++++.++++++.++|++++.|+. . ....|+|+.|| ++.+++ ++|+
T Consensus 258 l~~~~---------------gpli~~~~~~~v~~~i~~a~~~Ga~~~gg~~~~~~~~~G~~~~pt~~~i~~~~~~~~~~~ 322 (439)
T cd07081 258 FEGQG---------------AYKLTAEELQQVQPVILKNGDVNRDIVGQDAYKIAAAAGLKVPQETRILIGEVTSLAEHE 322 (439)
T ss_pred HHHcC---------------CccCCHHHHHHHHHHHHhcCCcCCcccCCCHHHHHHHcCCccCCCceEEEEecCCCCCCc
Confidence 98863 7999999999999999999999997754432 1 11258899998 998888 9999
Q ss_pred ccccccccceEEEeeeCCHHHHHHHHhcC----CCCceEEEecCC---HHHHHHHHhccceeEEEECCcCC---CCCCCC
Q 015031 308 IAKNEIFGPVMALMKFKTVEEAIKSANNT----RYGLAAGIMTKD---LNVANTVSRSIRAGIIWINCYFA---FDSDCP 377 (414)
Q Consensus 308 ~~~~E~fgPvl~v~~~~~~~eai~~~n~~----~~gl~~sv~s~d---~~~~~~~~~~l~~g~v~vN~~~~---~~~~~p 377 (414)
+++||+||||++|++|+|+||||+++|++ +|||+++|||+| .+.++++++++++|.|+||++.. ..-.--
T Consensus 323 i~~eE~FGPVl~v~~~~~~dEAi~~aN~~~n~~~~GLsa~V~T~d~~~~~~a~~~a~~l~~G~V~iN~~~~~~~~g~~~~ 402 (439)
T cd07081 323 PFAHEKLSPVLAMYRAANFADADAKALALKLEGGCGHTSAMYSDNIKAIENMNQFANAMKTSRFVKNGPCSQGGLGDLYN 402 (439)
T ss_pred hhhhCccCceEEEEEcCCHHHHHHHHHHHhhccCCCceEEEECCCcchHHHHHHHHhhCCceEEEEeCCccccccccccC
Confidence 99999999999999999999999999965 899999999999 99999999999999999997652 222345
Q ss_pred ccCCCCC--CCCCcch-----HHHHHhhhcccEEEE
Q 015031 378 YGGYKMS--GFGRDCG-----LESLHNYLQVKSVVT 406 (414)
Q Consensus 378 fgG~~~s--G~g~~~g-----~~~~~~~~~~k~i~~ 406 (414)
|||++.+ |.|..+| .-+.++|++.|.|.+
T Consensus 403 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 438 (439)
T cd07081 403 FRGWPSMTLGCGTWGGNSVSENVGPKHLVNLKTVAL 438 (439)
T ss_pred CCCCeeEeeecCCCCCCCcCCCCChHhhheeeeeec
Confidence 6666654 3333332 346789999888765
|
Coenzyme A acylating aldehyde dehydrogenase (ACDH), an NAD+ and CoA-dependent acetaldehyde dehydrogenase, acetylating (EC=1.2.1.10), functions as a single enzyme (such as the Ethanolamine utilization protein, EutE, in Salmonella typhimurium) or as part of a multifunctional enzyme to convert acetaldehyde into acetyl-CoA. The E. coli aldehyde-alcohol dehydrogenase includes the functional domains, alcohol dehydrogenase (ADH), ACDH, and pyruvate-formate-lyase deactivase; and the Entamoeba histolytica aldehyde-alcohol dehydrogenase 2 (ALDH20A1) includes the functional domains ADH and ACDH, and may be critical enzymes in the fermentative pathway. |
| >PRK15398 aldehyde dehydrogenase EutE; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-72 Score=566.79 Aligned_cols=374 Identities=19% Similarity=0.240 Sum_probs=317.0
Q ss_pred CHHHHHHHHHhHHHHHHHHHHHcCCChHHHhhccHHHHHHHHHHHHHhhhh---hcCceeccccCccccccccCCcEEEE
Q 015031 1 MLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADK---IHGEVLKMSRALQGYTLREPIGVVGH 77 (414)
Q Consensus 1 L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~~~~---~~~~~~~~~~~~~~~~~~~P~Gvv~~ 77 (414)
|+++++.|++|+++|+++++.|+||+..++.. ..+++++..... ....... ..+...+++++|+|||++
T Consensus 64 L~~la~~l~~~~~ela~~~~~E~Gk~~~ea~~-------~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~v~~~P~GVV~~ 135 (465)
T PRK15398 64 IDAIREALLPHAEELAELAVEETGMGRVEDKI-------AKNVAAAEKTPGVEDLTTEALT-GDNGLTLIEYAPFGVIGA 135 (465)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHCCCcHHHHH-------HHHHHHHHHhccccccccCccc-CCCceeEEEecccEEEEE
Confidence 67899999999999999999999999886432 233444433211 1111111 122345788899999999
Q ss_pred EcCCCcChHhhHHHHHHHHhcCCeEEEecCCCChhHHHHHHHHHH----HcCCCCCeEEEEcCCchhHHHHHHhCCCcCe
Q 015031 78 IIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAK----LAGVPDGVLNVVPGFGPTAGAAIASHMDIDK 153 (414)
Q Consensus 78 i~p~n~P~~~~~~~~~~ALaaGN~vv~kps~~~~~~~~~l~~~~~----~aglp~g~v~~~~~~~~~~~~~l~~~~~~~~ 153 (414)
|+|||||+...++++++||++||+||+|||+.+|.++..+.+++. ++|+|+|+++++++.+.+.++.|++||++|+
T Consensus 136 I~PwN~P~~~~~~~ia~ALaaGN~VVlKps~~tp~t~~~l~~ll~~~l~eaGlP~gvv~vv~g~~~~~~~~L~~~~~vd~ 215 (465)
T PRK15398 136 VTPSTNPTETIINNAISMLAAGNSVVFSPHPGAKKVSLRAIELLNEAIVAAGGPENLVVTVAEPTIETAQRLMKHPGIAL 215 (465)
T ss_pred eeCCCCchHHHHHHHHHHHHhCCcEEEECCccchHHHHHHHHHHHHHHHHcCCCCCeEEEecCCCHHHHHHHHcCCCccE
Confidence 999999999999999999999999999999999999999998876 6899999999999877778999999999999
Q ss_pred EEEeCCHHHHHHHHHHHhhCCCCceeeeCCCCCceeecCCCCHHHHHHHHHHHHhcccCCccccCcEEEEeCccHHHHHH
Q 015031 154 VSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEK 233 (414)
Q Consensus 154 v~~tGs~~~~~~i~~~~~~~~~~~~~~e~gG~~~~iV~~dadl~~a~~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f~~ 233 (414)
|.||||+++|+.|.+ ..+|+++|+|||||+||++|||++.|++.+++++|.|+||.|+++++||||+++||+|++
T Consensus 216 I~fTGS~~~G~~v~~-----~~k~~~~elGGk~p~IV~~dADld~Aa~~i~~g~~~n~GQ~C~A~~rvlV~~si~d~f~~ 290 (465)
T PRK15398 216 LVVTGGPAVVKAAMK-----SGKKAIGAGAGNPPVVVDETADIEKAARDIVKGASFDNNLPCIAEKEVIVVDSVADELMR 290 (465)
T ss_pred EEeeCCHHHHHHHHH-----cCCceeeecCCCceEEEecCCCHHHHHHHHHHhcccCCCCcCCCCceEEEeHHHHHHHHH
Confidence 999999999999987 258999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhccccCCCCCCCCCccccCCHHHHHHHHHHHHHhhhcCCeEeeCCccc---CCCCcee---eeEEEEeCCCCCc
Q 015031 234 KLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPI---GKKGYYI---EPTIFTNVTEDML 307 (414)
Q Consensus 234 ~l~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ga~v~~gg~~~---~~~g~~~---~Ptvl~~~~~~~~ 307 (414)
+|+++. +|+++..+++++.++++++..++++++.||... ...|.++ +|||+.+++++|+
T Consensus 291 ~l~~~~---------------~~li~~~~~~~v~~~l~~~~~~~~~~~~g~~~~~i~~~~G~~~~~~~~tvl~~v~~d~~ 355 (465)
T PRK15398 291 LMEKNG---------------AVLLTAEQAEKLQKVVLKNGGTVNKKWVGKDAAKILEAAGINVPKDTRLLIVETDANHP 355 (465)
T ss_pred HHHHcC---------------CccCCHHHHHHHHHHHhhcccccchhhhCCCHHHHHHhCCCCCCCCCCEEEecCCCCCc
Confidence 998751 268999999999999986554556777776421 1246655 4899999999999
Q ss_pred ccccccccceEEEeeeCCHHHHHHHHhcCCCCc--eEEEecCCHHHHHHHHhccceeEEEECCcCCCCCCCCccCCCCCC
Q 015031 308 IAKNEIFGPVMALMKFKTVEEAIKSANNTRYGL--AAGIMTKDLNVANTVSRSIRAGIIWINCYFAFDSDCPYGGYKMSG 385 (414)
Q Consensus 308 ~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl--~~sv~s~d~~~~~~~~~~l~~g~v~vN~~~~~~~~~pfgG~~~sG 385 (414)
+++||+||||++|++|+|+|||++++|+++||| ++||||+|.+.++++++++++|+|+||++.. +.+||||.|.|.
T Consensus 356 i~~eE~FGPVl~V~~~~d~deAi~~aN~~~yGL~hs~~IfT~d~~~a~~~a~~l~~G~V~iN~~~~--~~~p~gg~~~s~ 433 (465)
T PRK15398 356 FVVTELMMPVLPVVRVKDVDEAIALAVKLEHGNRHTAIMHSRNVDNLNKMARAIQTSIFVKNGPSY--AGLGLGGEGFTT 433 (465)
T ss_pred hhcccccCceEEEEEeCCHHHHHHHHHhcccCCcceEEEecCCHHHHHHHHHhCCceEEEECCCCc--cccCcCCCCCce
Confidence 999999999999999999999999999999988 9999999999999999999999999998753 678999999998
Q ss_pred CCCcchHHHHHhhhcccEEEE
Q 015031 386 FGRDCGLESLHNYLQVKSVVT 406 (414)
Q Consensus 386 ~g~~~g~~~~~~~~~~k~i~~ 406 (414)
+- .+|+.| ...|..|+++.
T Consensus 434 ~~-~~~~~g-~~~~~~~~~~~ 452 (465)
T PRK15398 434 FT-IATPTG-EGVTSARTFTR 452 (465)
T ss_pred ee-ecccCC-CCccchhhhhh
Confidence 62 124555 55555555443
|
|
| >cd07127 ALDH_PAD-PaaZ Phenylacetic acid degradation proteins PaaZ (Escherichia coli) and PaaN (Pseudomonas putida)-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.3e-70 Score=557.84 Aligned_cols=393 Identities=17% Similarity=0.204 Sum_probs=337.8
Q ss_pred CHHHHHHHHHhHHHHHHHHHHHcCCChHHHhhc----cHHHHHHHHHHHHHhhhhhcCceecc-ccC------ccccccc
Q 015031 1 MLKFADLIEEHAEVLAVLEALDAGKLHSWAKMG----DIPGAANTLRYYAGAADKIHGEVLKM-SRA------LQGYTLR 69 (414)
Q Consensus 1 L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~~~~~----ev~~~~~~l~~~~~~~~~~~~~~~~~-~~~------~~~~~~~ 69 (414)
|++++++|++++++|++++++|+||+..++.+. |++++++.++|+++.+.+..+...+. ..+ ......+
T Consensus 112 l~~~a~~l~~~~~ela~a~~~e~Gk~~~~a~qa~~~~evd~a~e~~~~a~~~~~~~~~~~~w~~~~~~~~~l~~~k~~~~ 191 (549)
T cd07127 112 CLEILQRLNARSFEMAHAVMHTTGQAFMMAFQAGGPHAQDRGLEAVAYAWREMSRIPPTAEWEKPQGKHDPLAMEKTFTV 191 (549)
T ss_pred HHHHHHHHHhCHHHHHHHHHHHHCCCHHHHHhcccHHHHHHHHHHHHHHHHHHHhccccccccCCCCCcccccccceeEE
Confidence 578999999999999999999999999866432 79999999999998877654432211 011 1123478
Q ss_pred cCCcEEEEEcCCCcChHhhHHHHHHHHhcCCeEEEecCCCChhHH----HHHHHHHHHcCCCCCeEEEEcCC-chhHHHH
Q 015031 70 EPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIA----LYFAHLAKLAGVPDGVLNVVPGF-GPTAGAA 144 (414)
Q Consensus 70 ~P~Gvv~~i~p~n~P~~~~~~~~~~ALaaGN~vv~kps~~~~~~~----~~l~~~~~~aglp~g~v~~~~~~-~~~~~~~ 144 (414)
+|+||+++|+|||||+++.+.++++||++||+||+|||+.+|+++ ..+.++|.++|+|+|+||+++++ +.++++.
T Consensus 192 ~P~GVv~vI~p~nfP~~~~~~~i~~ALaaGN~VVvKPs~~a~ls~~~~~~~i~~~l~eAGlP~gvv~~v~g~~~~~~~~~ 271 (549)
T cd07127 192 VPRGVALVIGCSTFPTWNGYPGLFASLATGNPVIVKPHPAAILPLAITVQVAREVLAEAGFDPNLVTLAADTPEEPIAQT 271 (549)
T ss_pred ecccEEEEEeCcCChHHHHHHHHHHHHhcCCeEEEECCcccchhHHHHHHHHHHHHHHcCcCcccEEEEeCCCcHHHHHH
Confidence 999999999999999999999999999999999999999999875 45668999999999999999985 4678999
Q ss_pred HHhCCCcCeEEEeCCHHHHHHHHHHHhhCCCCceeeeCCCCCceeecCCCCHHHHHHHHHHHHhcccCCccccCcEEEEe
Q 015031 145 IASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQ 224 (414)
Q Consensus 145 l~~~~~~~~v~~tGs~~~~~~i~~~~~~~~~~~~~~e~gG~~~~iV~~dadl~~a~~~i~~~~~~~~Gq~C~a~~~v~V~ 224 (414)
|+.||.++.|.||||+.+|+.|.+.++ .+|+++|+|||||+||++|+|++.+++.+++++|.|+||.|++++|+|||
T Consensus 272 L~~~p~v~~I~FTGS~~~G~~i~~~a~---~~~v~~ElGGkn~~IV~~dADl~~aa~~i~~~~f~~sGQ~C~a~~ri~V~ 348 (549)
T cd07127 272 LATRPEVRIIDFTGSNAFGDWLEANAR---QAQVYTEKAGVNTVVVDSTDDLKAMLRNLAFSLSLYSGQMCTTPQNIYVP 348 (549)
T ss_pred HHhCCCCCEEEEECCHHHHHHHHHHhc---cCcEEEecCCcCeEEECCCCCHHHHHHHHHHHHHccCCCCCCCCCEEEEE
Confidence 999999999999999999999999876 47999999999999999999999999999999999999999999999999
Q ss_pred Cc---------cHHHHHHHHHHHHhccccCCCCCCCCCccccCCHHHHHHHHHHHHHhhhcCCeEeeCCcccC---CCC-
Q 015031 225 EG---------IYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIG---KKG- 291 (414)
Q Consensus 225 ~~---------~~~~f~~~l~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~---~~g- 291 (414)
++ +||+|+++|+++++++ +|+|.+..+.+||++++.+++++.+ ++..|+ +++||.... ..|
T Consensus 349 ~s~i~~~~g~~i~d~f~~~L~~~~~~l-~Gdp~~~~~~~Gpli~~~~~~ri~~----a~~~g~-vl~gg~~~~~~~~~g~ 422 (549)
T cd07127 349 RDGIQTDDGRKSFDEVAADLAAAIDGL-LADPARAAALLGAIQSPDTLARIAE----ARQLGE-VLLASEAVAHPEFPDA 422 (549)
T ss_pred CCccccccchhHHHHHHHHHHHHHHHh-cCCccccccccCCcCCHHHHHHHHH----HHhCCC-EEEcCCcCCCcCCCCc
Confidence 99 8999999999999999 9999999999999999999999865 444554 778876532 134
Q ss_pred ceeeeEEEEeCCCCCcccccccccceEEEeeeCCHHHHHHHHhcCC--C-CceEEEecCCHHHHHHHHhccc-e-eEEEE
Q 015031 292 YYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTR--Y-GLAAGIMTKDLNVANTVSRSIR-A-GIIWI 366 (414)
Q Consensus 292 ~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~--~-gl~~sv~s~d~~~~~~~~~~l~-~-g~v~v 366 (414)
++++|||+.+.+++|++++||+||||++|++|+|.|||++++|++. + ||++||||+|.+.++++.+++. + |.++|
T Consensus 423 ~~~~Ptvl~~~~~d~~i~~eE~FGPVl~V~~~~d~~eai~~an~~~~~~ggLt~sVfs~D~~~~~~~~~~~~~~~~~~~i 502 (549)
T cd07127 423 RVRTPLLLKLDASDEAAYAEERFGPIAFVVATDSTDHSIELARESVREHGAMTVGVYSTDPEVVERVQEAALDAGVALSI 502 (549)
T ss_pred eEEeCEEEEeCCCCCHHHcCCCcCceEEEEEeCCHHHHHHHHHhcccCCCCceEEEEcCCHHHHHHHHHHHHHhcCcEEE
Confidence 4669999998889999999999999999999999999999999973 4 6999999999999999999954 4 59999
Q ss_pred CCcCCCC--CCCCccCCCCCCCCC-cchHHHHHhhhccc
Q 015031 367 NCYFAFD--SDCPYGGYKMSGFGR-DCGLESLHNYLQVK 402 (414)
Q Consensus 367 N~~~~~~--~~~pfgG~~~sG~g~-~~g~~~~~~~~~~k 402 (414)
|+....- ..+||||.+.||... .+..+....|...+
T Consensus 503 N~tg~v~~~q~~~Fg~~~~sg~n~~a~~~~~~~~fv~~r 541 (549)
T cd07127 503 NLTGGVFVNQSAAFSDFHGTGANPAANAALTDGAFVANR 541 (549)
T ss_pred cCCceEEEecCcCCCCCCCCCCCcccccccchhhhhhcc
Confidence 9765433 345699999999874 34455555555443
|
Phenylacetic acid degradation (PAD) proteins PaaZ (Escherichia coli) and PaaN (Pseudomonas putida) are putative aromatic ring cleavage enzymes of the aerobic PA catabolic pathway. PaaZ mutants were defective for growth with PA as a sole carbon source due to interruption of the putative ring opening system. This CD is limited to bacterial monofunctional enzymes. |
| >cd07079 ALDH_F18-19_ProA-GPR Gamma-glutamyl phosphate reductase (GPR), aldehyde dehydrogenase families 18 and 19 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.3e-71 Score=551.92 Aligned_cols=356 Identities=21% Similarity=0.257 Sum_probs=309.7
Q ss_pred CHHHHHHHHHhHHHHHHHHHHHcCCChH----HHh-------hccHHHHHHHHHHHHHhhhhhcCceecc---ccCcccc
Q 015031 1 MLKFADLIEEHAEVLAVLEALDAGKLHS----WAK-------MGDIPGAANTLRYYAGAADKIHGEVLKM---SRALQGY 66 (414)
Q Consensus 1 L~~~a~~l~~~~~~l~~~~~~e~Gk~~~----~~~-------~~ev~~~~~~l~~~~~~~~~~~~~~~~~---~~~~~~~ 66 (414)
|+++++.|++|+++|+++++.|+||+.. ++. ..|+..+++.+++++...+. .+...+. +.+...+
T Consensus 26 L~~~a~~l~~~~~~la~~~~~d~gk~~e~G~~~a~~~~l~~~~~ev~~~~~~~~~~a~~~~~-~g~~~~~~~~~~~~~~~ 104 (406)
T cd07079 26 LLAIADALEANRDEILEANAKDLAAAREAGLSEALLDRLLLTPERIEAMAEGLRQVAALPDP-VGEVLRGWTLPNGLQIE 104 (406)
T ss_pred HHHHHHHHHhchHHHHHHhhhhHHHHHHcCCCHHHHhHhcCCHHHHHHHHHHHHHHHhcCCC-CcccccceeccCcccee
Confidence 5789999999999999999777666643 222 24899999999998876542 2322221 1233567
Q ss_pred ccccCCcEEEEEcCCCcChHhhHHHHHHHHhcCCeEEEecCCCChhHHHHHHHHHH----HcCCCCCeEEEEcCCch-hH
Q 015031 67 TLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAK----LAGVPDGVLNVVPGFGP-TA 141 (414)
Q Consensus 67 ~~~~P~Gvv~~i~p~n~P~~~~~~~~~~ALaaGN~vv~kps~~~~~~~~~l~~~~~----~aglp~g~v~~~~~~~~-~~ 141 (414)
.+++|+|||++|+|| +| ...++++++||++||+||+|||+.+|.++..+.+++. ++|+|+|++|++++.+. +.
T Consensus 105 ~~~~PlGVV~~I~p~-~p-~~~~~~~~~ALaaGN~vVlKps~~tp~~~~~l~~~~~~~l~~aG~P~gvv~~v~g~~~~~~ 182 (406)
T cd07079 105 KVRVPLGVIGIIYES-RP-NVTVDAAALCLKSGNAVILRGGSEALHSNRALVEIIQEALEEAGLPEDAVQLIPDTDREAV 182 (406)
T ss_pred EEecceEEEEEecCC-Cc-chHHHHHHHHHHhCCEEEEeCCchhhhHHHHHHHHHHHHHHHcCCCcccEEEecCCChHHH
Confidence 889999999999995 56 6788899999999999999999999999999998886 89999999999998544 67
Q ss_pred HHHHHhCCCcCeEEEeCCHHHHHHHHHHHhhCCCCceeeeCCCCCceeecCCCCHHHHHHHHHHHHhcccCCccccCcEE
Q 015031 142 GAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRV 221 (414)
Q Consensus 142 ~~~l~~~~~~~~v~~tGs~~~~~~i~~~~~~~~~~~~~~e~gG~~~~iV~~dadl~~a~~~i~~~~~~~~Gq~C~a~~~v 221 (414)
++.|.+||++|.|+||||+.+|+.|.+.+ ++|+++|+|||||+||++|||++.|++.+++++|.|+| .|++++||
T Consensus 183 ~~~l~~~~~v~~i~fTGS~~~G~~i~~~a----~~pv~lELGGk~p~IV~~dADl~~Aa~~i~~~~f~n~G-~C~a~~rv 257 (406)
T cd07079 183 QELLKLDDYIDLIIPRGGAGLIRFVVENA----TIPVIKHGDGNCHVYVDESADLEMAVRIVVNAKTQRPS-VCNALETL 257 (406)
T ss_pred HHHHcCCCCccEEEeCCCHHHHHHHHHhc----CCCEEeecCCcceEEEeCCCCHHHHHHHHHHcccCCCc-ccccceeE
Confidence 88899999999999999999999998764 69999999999999999999999999999999999999 99999999
Q ss_pred EEeCccHHHHHHHHHHHHhccccCCCCCCCCCccccCCHHHHHHHHHHHHHhhhcCCeEeeCCcccCCCCceeeeEEEEe
Q 015031 222 YVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIGKKGYYIEPTIFTN 301 (414)
Q Consensus 222 ~V~~~~~~~f~~~l~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~~~g~~~~Ptvl~~ 301 (414)
|||+++||+|+++|++++++. |++++ +|... ..|++||
T Consensus 258 ~V~~si~d~f~~~l~~~~~~~----------------------------------ga~~~-~g~~~---~~~~~pt---- 295 (406)
T cd07079 258 LVHRDIAEEFLPKLAEALREA----------------------------------GVELR-GDEET---LAILPGA---- 295 (406)
T ss_pred EEeHHHHHHHHHHHHHHHHHC----------------------------------CCEEe-cCHHH---HHhcccc----
Confidence 999999999999999887752 34544 33221 1377888
Q ss_pred CCCCCcccccccccceEEEeeeCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHHhccceeEEEECCcCCCCCCCCccCC
Q 015031 302 VTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSIRAGIIWINCYFAFDSDCPYGGY 381 (414)
Q Consensus 302 ~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~sv~s~d~~~~~~~~~~l~~g~v~vN~~~~~~~~~pfgG~ 381 (414)
++++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.+.++++++++++|.|+||++....+..||||.
T Consensus 296 v~~d~~i~~eE~FGPVl~v~~~~~~deAi~~aN~~~~GLsa~ift~d~~~a~~~~~~~~~G~v~iN~~~~~~~~~pfg~~ 375 (406)
T cd07079 296 KPATEEDWGTEYLDLILAVKVVDSLDEAIAHINRYGSGHTEAIVTENYETAERFLREVDSAAVYVNASTRFTDGGEFGLG 375 (406)
T ss_pred cCCCcchhhhhhhCceeEEEEeCCHHHHHHHHHHhCCccccEeeeCCHHHHHHHHHhCCeeEEEEeCCCcccCCCccccc
Confidence 78999999999999999999999999999999999999999999999999999999999999999998766667899999
Q ss_pred CCCCC----CCcchHHHHHhhhcccEEEE
Q 015031 382 KMSGF----GRDCGLESLHNYLQVKSVVT 406 (414)
Q Consensus 382 ~~sG~----g~~~g~~~~~~~~~~k~i~~ 406 (414)
+.||. |+++|.+++++||+.|+++.
T Consensus 376 ~~sG~~~~~g~~~g~~~l~~~~~~k~i~~ 404 (406)
T cd07079 376 AEIGISTQKLHARGPMGLEELTTYKYIVR 404 (406)
T ss_pred eeeeeecCCCcCCCCcChHHhcEEEEEEe
Confidence 99998 89999999999999999875
|
Gamma-glutamyl phosphate reductase (GPR), a L-proline biosynthetic pathway (PBP) enzyme that catalyzes the NADPH dependent reduction of L-gamma-glutamyl 5-phosphate into L-glutamate 5-semialdehyde and phosphate. The glutamate route of the PBP involves two enzymatic steps catalyzed by gamma-glutamyl kinase (GK, EC 2.7.2.11) and GPR (EC 1.2.1.41). These enzymes are fused into the bifunctional enzyme, ProA or delta(1)-pyrroline-5-carboxylate synthetase (P5CS) in plants and animals, whereas they are separate enzymes in bacteria and yeast. In humans, the P5CS (ALDH18A1), an inner mitochondrial membrane enzyme, is essential to the de novo synthesis of the amino acids proline and arginine. Tomato (Lycopersicon esculentum) has both the prokaryotic-like polycistronic operons encoding GK and GPR (PRO1, ALDH19) and the full-length, bifunctional P5CS (PRO2, ALDH18B1). |
| >cd07122 ALDH_F20_ACDH Coenzyme A acylating aldehyde dehydrogenase (ACDH), ALDH family 20-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.8e-70 Score=545.34 Aligned_cols=383 Identities=22% Similarity=0.261 Sum_probs=324.3
Q ss_pred CHHHHHHHHHhHHHHHHHHHHHcCCChHHHhhccHHHHHH-HHHHHHHhhhhhcCceeccccCccccccccCCcEEEEEc
Q 015031 1 MLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAAN-TLRYYAGAADKIHGEVLKMSRALQGYTLREPIGVVGHII 79 (414)
Q Consensus 1 L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~ 79 (414)
|+++++.|++|+++|++++++|+|||..++...|+...++ .+++++.. +..+. .....+...+++++|+|||++|+
T Consensus 27 L~~~a~~l~~~~eela~~~~~E~Gk~~~ea~~~e~~~~~~~~~~~~~~~--~~~g~-~~~~~~~~~~~~~~P~GVv~~I~ 103 (436)
T cd07122 27 VEAVAWAAADAAEELAKMAVEETGMGVVEDKVIKNHFASEYVYNDIKDM--KTVGV-IEEDEEKGIVEIAEPVGVIAALI 103 (436)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHHHHHHHhcC--cceee-eccCCCCCeEEEeecccEEEEEe
Confidence 5789999999999999999999999998765447777777 77777752 22221 11122345678899999999999
Q ss_pred CCCcChHhhHHHHHHHHhcCCeEEEecCCCChhHHHHHHHHH----HHcCCCCCeEEEEcCCchhHHHHHHhCCCcCeEE
Q 015031 80 PWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLA----KLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVS 155 (414)
Q Consensus 80 p~n~P~~~~~~~~~~ALaaGN~vv~kps~~~~~~~~~l~~~~----~~aglp~g~v~~~~~~~~~~~~~l~~~~~~~~v~ 155 (414)
|||||+...++++++||++||+||+|||+.+|.++..+.+++ .++|+|+|++|++++.+.+.++.|+.||++|.|.
T Consensus 104 pwN~P~~~~~~~~~~ALaaGN~VVlKps~~tp~~~~~~~~~~~~~l~eaG~P~g~v~~v~g~~~~~~~~l~~~~~v~~v~ 183 (436)
T cd07122 104 PSTNPTSTAIFKALIALKTRNAIIFSPHPRAKKCSIEAAKIMREAAVAAGAPEGLIQWIEEPSIELTQELMKHPDVDLIL 183 (436)
T ss_pred CCCCchHHHHHHHHHHHHcCCcEEEECCcchhhHHHHHHHHHHHHHHHcCCCchhEEEecCCChHHHHHHHcCCCcCEEE
Confidence 999999999999999999999999999999999999887776 4789999999999987778899999999999999
Q ss_pred EeCCHHHHHHHHHHHhhCCCCceeeeCCCCCceeecCCCCHHHHHHHHHHHHhcccCCccccCcEEEEeCccHHHHHHHH
Q 015031 156 FTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKL 235 (414)
Q Consensus 156 ~tGs~~~~~~i~~~~~~~~~~~~~~e~gG~~~~iV~~dadl~~a~~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f~~~l 235 (414)
||||+.+++ .++ .+++|+++|+|||||+||++|||++.|++.+++++|+|+||.|+++++||||+++||+|+++|
T Consensus 184 ftGs~~v~~----~a~-~~~~~~~~elgG~~p~iV~~dADl~~A~~~i~~~~f~~~GQ~C~a~~rv~V~~~i~d~f~~~l 258 (436)
T cd07122 184 ATGGPGMVK----AAY-SSGKPAIGVGPGNVPAYIDETADIKRAVKDIILSKTFDNGTICASEQSVIVDDEIYDEVRAEL 258 (436)
T ss_pred EcCCHHHHH----HHH-hcCCCEEEecCCCCeEEEcCCCCHHHHHHHHHHHhhccCCCCCCCCCEEEEechhHHHHHHHH
Confidence 999999654 333 678999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhcc-------ccCCC-CCCCCCccccCCHHHHHHHHHHHHHhhhcCCeEeeCCcccCCCCceeeeEEEEeCCCCCc
Q 015031 236 VEKAKAW-------VVGDP-FDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIGKKGYYIEPTIFTNVTEDML 307 (414)
Q Consensus 236 ~~~~~~~-------~~g~~-~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~ 307 (414)
+++...+ ++|++ .+.++.+||+++..+++++.+++..+..+|++++.++ +.+++++|+
T Consensus 259 ~~~~~~l~~~~~~~~v~~~~~~~~~~~gp~~~~~~~~~~~~~~~~~~~~ga~vl~~~--------------~~~v~~~~~ 324 (436)
T cd07122 259 KRRGAYFLNEEEKEKLEKALFDDGGTLNPDIVGKSAQKIAELAGIEVPEDTKVLVAE--------------ETGVGPEEP 324 (436)
T ss_pred HHhcceecCHHHHHHHHHHhhcCCCCcCccccCcCHHHHHHHcCCCCCCCCeEEEEe--------------cCCCCCCCc
Confidence 9999887 88888 4677889999999999988888777777777776555 346788899
Q ss_pred ccccccccceEEEeeeCCHHHHHHHHhcC----CCCceEEEecCCHHHHHHHHhccceeEEEECCcCCC-CCCCCcc---
Q 015031 308 IAKNEIFGPVMALMKFKTVEEAIKSANNT----RYGLAAGIMTKDLNVANTVSRSIRAGIIWINCYFAF-DSDCPYG--- 379 (414)
Q Consensus 308 ~~~~E~fgPvl~v~~~~~~~eai~~~n~~----~~gl~~sv~s~d~~~~~~~~~~l~~g~v~vN~~~~~-~~~~pfg--- 379 (414)
++ +|.||||++|++|+|+||||+++|++ +|||++||||+|.+.++++++++++|+||||++..+ ..+..++
T Consensus 325 ~~-~E~FGPVl~v~~~~~~~eAi~~aN~~~~~~~~GLsa~V~T~d~~~a~~~~~~l~aG~V~IN~~~~~~~~g~~~~~~~ 403 (436)
T cd07122 325 LS-REKLSPVLAFYRAEDFEEALEKARELLEYGGAGHTAVIHSNDEEVIEEFALRMPVSRILVNTPSSLGGIGDTYNGLA 403 (436)
T ss_pred ch-hcccCCeEEEEEeCCHHHHHHHHHHHHhccCCCceEEEEcCCHHHHHHHHhhCCceEEEEeCCccccccCccCCCCC
Confidence 87 56799999999999999999999997 899999999999999999999999999999988641 1111121
Q ss_pred -----CCCCCCCCCcchHHHHHhhhcccEEEE
Q 015031 380 -----GYKMSGFGRDCGLESLHNYLQVKSVVT 406 (414)
Q Consensus 380 -----G~~~sG~g~~~g~~~~~~~~~~k~i~~ 406 (414)
|.+..|.+...+.-+.++|++.++|.+
T Consensus 404 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 435 (436)
T cd07122 404 PSLTLGCGSWGGNSTSDNVGPKHLLNIKRVAY 435 (436)
T ss_pred ceeeeeccccCCCcCCCCCChHHhheeEeecc
Confidence 122223344455677889998888754
|
Coenzyme A acylating aldehyde dehydrogenase (ACDH, EC=1.2.1.10), an NAD+ and CoA-dependent acetaldehyde dehydrogenase, functions as a single enzyme (such as the Ethanolamine utilization protein, EutE, in Salmonella typhimurium) or as part of a multifunctional enzyme to convert acetaldehyde into acetyl-CoA . The E. coli aldehyde-alcohol dehydrogenase includes the functional domains, alcohol dehydrogenase (ADH), ACDH, and pyruvate-formate-lyase deactivase; and the Entamoeba histolytica aldehyde-alcohol dehydrogenase 2 (ALDH20A1) includes the functional domains ADH and ACDH and may be critical enzymes in the fermentative pathway. |
| >PRK00197 proA gamma-glutamyl phosphate reductase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.7e-70 Score=546.01 Aligned_cols=359 Identities=22% Similarity=0.266 Sum_probs=311.0
Q ss_pred CHHHHHHHHHhHHHHHHHHHHHcCCChH----HHh-------hccHHHHHHHHHHHHHhhhhhcCceecc---ccCcccc
Q 015031 1 MLKFADLIEEHAEVLAVLEALDAGKLHS----WAK-------MGDIPGAANTLRYYAGAADKIHGEVLKM---SRALQGY 66 (414)
Q Consensus 1 L~~~a~~l~~~~~~l~~~~~~e~Gk~~~----~~~-------~~ev~~~~~~l~~~~~~~~~~~~~~~~~---~~~~~~~ 66 (414)
|+++++.|++|+++|++++++|+||+.. ++. ..|+..+++.+++++.+++.. +...+. +.+...+
T Consensus 32 L~~~a~~l~~~~~~la~~~~~d~g~~~~~g~~~~~~~~~~~~~~ev~~~~~~~~~~a~~~~~~-g~~~~~~~~~~~~~~~ 110 (417)
T PRK00197 32 LLAIADALEANAAEILAANAKDLAAARANGLSAAMLDRLLLTEARIEGIAEGLRQVAALPDPV-GEVLDGWTLPNGLRIG 110 (417)
T ss_pred HHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCHHHHHHhcCCHHHHHHHHHHHHHHhhcCCCc-cccccceecCCCceEE
Confidence 5789999999999999999988877642 222 147888999999998776543 333221 2233568
Q ss_pred ccccCCcEEEEEcCCCcChHhhHHHHHHHHhcCCeEEEecCCCChhHHHHHHHHH----HHcCCCCCeEEEEcCCc-hhH
Q 015031 67 TLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLA----KLAGVPDGVLNVVPGFG-PTA 141 (414)
Q Consensus 67 ~~~~P~Gvv~~i~p~n~P~~~~~~~~~~ALaaGN~vv~kps~~~~~~~~~l~~~~----~~aglp~g~v~~~~~~~-~~~ 141 (414)
.+++|+|||++|+||| | ...++++++||++||+||+|||+.+|.++..+.+++ .++|+|+|++|++++.+ .+.
T Consensus 111 ~~~~PlGVv~~I~p~p-~-~~~~~~~~~ALaaGN~vVlKPs~~tp~t~~~l~~l~~~~l~~aGlP~gv~~~v~g~~~~~~ 188 (417)
T PRK00197 111 RVRVPLGVIGVIYESR-P-NVTVDAAALCLKSGNAVILRGGSEAIHSNRALVAVIQEALEEAGLPADAVQLVETTDRAAV 188 (417)
T ss_pred EEecCceEEEEEcCCC-c-hHHHHHHHHHHHhCCeEEEecChhhhHHHHHHHHHHHHHHHHcCcChhhEEEecCCChHHH
Confidence 8999999999999885 4 677889999999999999999999999999988885 68999999999999644 457
Q ss_pred HHHHHhCCCcCeEEEeCCHHHHHHHHHHHhhCCCCceeeeCCCCCceeecCCCCHHHHHHHHHHHHhcccCCccccCcEE
Q 015031 142 GAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRV 221 (414)
Q Consensus 142 ~~~l~~~~~~~~v~~tGs~~~~~~i~~~~~~~~~~~~~~e~gG~~~~iV~~dadl~~a~~~i~~~~~~~~Gq~C~a~~~v 221 (414)
+..|..|+++|.|+||||+.+|+.+.+.+ ++|+++|+|||||+||++|||++.|++.+++++|.|+| .|++++|+
T Consensus 189 ~~~l~~~~~v~~V~fTGS~~~g~~i~~~a----~~~~~lELGGk~p~IV~~dAdl~~Aa~~iv~~~~~n~G-~C~a~~rv 263 (417)
T PRK00197 189 GELLKLDGYVDVIIPRGGAGLIRRVVENA----TVPVIEHGDGICHIYVDESADLDKALKIVLNAKTQRPS-VCNALETL 263 (417)
T ss_pred HHHhccCCCccEEEecCCHHHHHHHHHhc----CCCEEeecCCcceEEEeCCCCHHHHHHHHHHhccCCCc-ccccceEE
Confidence 88888899999999999999999998763 58999999999999999999999999999999999999 99999999
Q ss_pred EEeCccHHHHHHHHHHHHhccccCCCCCCCCCccccCCHHHHHHHHHHHHHhhhcCCeEeeCCcccCCCCceeeeEEEEe
Q 015031 222 YVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIGKKGYYIEPTIFTN 301 (414)
Q Consensus 222 ~V~~~~~~~f~~~l~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~~~g~~~~Ptvl~~ 301 (414)
|||+++||+|+++|++.+++++++. + ++... .+ |+ |||+
T Consensus 264 ~V~~~i~d~f~~~l~~~~~~~~~~~----------------------------------~-~~~~~--~~-~~-PTi~-- 302 (417)
T PRK00197 264 LVHEAIAEEFLPKLAEALAEAGVEL----------------------------------R-GDEAA--LA-LL-PDVV-- 302 (417)
T ss_pred EEEHHHhHHHHHHHHHHHHHCCCeE----------------------------------e-cCHHH--HH-hh-cccc--
Confidence 9999999999999999999875321 1 11100 12 22 9998
Q ss_pred CCCCCcccccccccceEEEeeeCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHHhccceeEEEECCcCCCCCCCCccCC
Q 015031 302 VTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSIRAGIIWINCYFAFDSDCPYGGY 381 (414)
Q Consensus 302 ~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~sv~s~d~~~~~~~~~~l~~g~v~vN~~~~~~~~~pfgG~ 381 (414)
+++|.+++||+||||++|++|+|.||||+++|+++|||++||||+|.+.++++++++++|+|+||++....+..||||.
T Consensus 303 -~~~~~i~~eE~FGPVl~v~~~~~~deAi~~aN~~~~GL~a~V~t~d~~~~~~~~~~l~~G~v~VN~~~~~~~~~p~G~~ 381 (417)
T PRK00197 303 -PATEEDWDTEYLDLILAVKVVDSLDEAIAHINRYGSGHTEAIVTEDYAAAERFLNEVDSAAVYVNASTRFTDGGEFGLG 381 (417)
T ss_pred -cCCcchhhhhhhCceEEEEEeCCHHHHHHHHHhcCCCCceEEEeCCHHHHHHHHHhCCeeEEEEeCCCccCCCCccccc
Confidence 4689999999999999999999999999999999999999999999999999999999999999998766677899999
Q ss_pred CCCCCC----CcchHHHHHhhhcccEEEEeCC
Q 015031 382 KMSGFG----RDCGLESLHNYLQVKSVVTPIF 409 (414)
Q Consensus 382 ~~sG~g----~~~g~~~~~~~~~~k~i~~~~~ 409 (414)
|.||+| +++|.+|+++||+.|+++....
T Consensus 382 ~~sG~g~~~~~~~g~~~l~~~~~~k~v~~~~~ 413 (417)
T PRK00197 382 AEIGISTQKLHARGPMGLEELTTYKYIVLGDG 413 (417)
T ss_pred hhheeecCCCcCCCccchHhhcEEEEEEECCC
Confidence 999999 8999999999999999987543
|
|
| >TIGR02518 EutH_ACDH acetaldehyde dehydrogenase (acetylating) | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.4e-69 Score=543.77 Aligned_cols=383 Identities=18% Similarity=0.169 Sum_probs=327.9
Q ss_pred CHHHHHHHHHhHHHHHHHHHHHcCCChHHHhhccHHHHHHHHHHHHHhhhhhcCceeccccCccccccccCCcEEEEEcC
Q 015031 1 MLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMSRALQGYTLREPIGVVGHIIP 80 (414)
Q Consensus 1 L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p 80 (414)
|+++++.|++|+++|++++..|+||+..++...+.......+.+++...+.. +. ...+.+...+..++|+|||++|+|
T Consensus 36 L~~~a~~l~~~~~ela~~~~~E~Gk~~~~~~~~~~~~~~~~~~~~~~~~~~~-G~-~~~~~~~~~~~~~~PlGVV~~I~P 113 (488)
T TIGR02518 36 VKAIVDAAYENAVKLAKMANEETGFGKWEDKVIKNVFAATIVYDSIKDMKTI-GI-LSEDKEKKVIEIAVPVGVVAGLIP 113 (488)
T ss_pred HHHHHHHHHhhHHHHHHHHHHHhCCChHHHHHHHHHHHHHHHHHHHhhCccc-ce-ecCCCCcceEEEEecceEEEEEcc
Confidence 5789999999999999999999999988643323333445554444422222 22 222334556778999999999999
Q ss_pred CCcChHhhHHHHHHHHhcCCeEEEecCCCChhHHHH----HHHHHHHcCCCCCeEEEEcCCchhHHHHHHhCCCcCeEEE
Q 015031 81 WNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALY----FAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSF 156 (414)
Q Consensus 81 ~n~P~~~~~~~~~~ALaaGN~vv~kps~~~~~~~~~----l~~~~~~aglp~g~v~~~~~~~~~~~~~l~~~~~~~~v~~ 156 (414)
||||+....+++++||++||+||+|||+.+|.++.. |.+++.++|+|+|++|++++++.+.++.|+.||++|+|.|
T Consensus 114 ~n~P~~~~~~k~~~AL~aGNaVIlKps~~a~~s~~~~~~~l~~~l~eaGlP~gvv~~v~g~~~e~~~~L~~~~~vd~V~f 193 (488)
T TIGR02518 114 STNPTSTAIYKTLISIKARNAIVFSPHPNAKKCIIETVKLMRKAAEEAGAPEGAIGCITVPTIEGTNELMKNKDTSLILA 193 (488)
T ss_pred cCChHHHHHHHHHHHHHcCCcEEEECCccchHHHHHHHHHHHHHHHHcCcCcccEEEEcCCCHHHHHHHHhCCCcCEEEE
Confidence 999999999999999999999999999999999998 4555689999999999999877889999999999999999
Q ss_pred eCCHHHHHHHHHHHhhCCCCceeeeCCCCCceeecCCCCHHHHHHHHHHHHhcccCCccccCcEEEEeCccHHHHHHHHH
Q 015031 157 TGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLV 236 (414)
Q Consensus 157 tGs~~~~~~i~~~~~~~~~~~~~~e~gG~~~~iV~~dadl~~a~~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f~~~l~ 236 (414)
|||+..++.+ . .+++|+++|+|||+|+||++|||++.|++.+++++|+|+||.|++.+++|||+++||+|+++|+
T Consensus 194 TGs~~v~~~a----~-~~~~pv~~e~gGn~p~iV~~dADld~Aa~~iv~sk~~~~Gq~C~a~~rllV~~~i~d~f~~~L~ 268 (488)
T TIGR02518 194 TGGEAMVKAA----Y-SSGTPAIGVGPGNGPAYIERTANVKKAVRDIIDSKTFDNGTICASEQSIIVEECNKDAVVEELK 268 (488)
T ss_pred eCCHHHHHHH----H-HcCCCEEEEcCCCCeEEEeCCCCHHHHHHHHHHHHhcCCCCCCCCCCEEEEeHHHHHHHHHHHH
Confidence 9999965433 2 5679999999999999999999999999999999999999999999999999999999999999
Q ss_pred HH-------HhccccCCC-CCCCCCccccCCHHHHHHHHHHHHHhhhcCCeEeeCCcccCCCCceeeeEEEEeCCCCCcc
Q 015031 237 EK-------AKAWVVGDP-FDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIGKKGYYIEPTIFTNVTEDMLI 308 (414)
Q Consensus 237 ~~-------~~~~~~g~~-~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~~ 308 (414)
++ .+.+++|+| .++++++||+++..+++++.+++++++.+|+++++||.. .+++++++
T Consensus 269 ~~g~~~~~~~~~~~vg~~~~~~~~~~gp~i~~~~~~~i~~~i~~av~~gakll~gg~~--------------~v~~~~~~ 334 (488)
T TIGR02518 269 KQGGYFLTAEEAEKLGKFILRPNGTMNPQIVGKSPQVIANLAGLTVPEDAKVLIGEQN--------------GVGNKNPY 334 (488)
T ss_pred HhhhhhcCHHHHHhhcccccCCCCCcCcccccchHHHHHHHhccccCCCCEEEEeCCC--------------CCCCCCcc
Confidence 98 888999996 678899999999999999999999999999999999853 24667776
Q ss_pred cccccccceEEEeeeCCHHHHHHHHhc----CCCCceEEEecCCHHHHHHHHhccceeEEEECCcCC---------CCCC
Q 015031 309 AKNEIFGPVMALMKFKTVEEAIKSANN----TRYGLAAGIMTKDLNVANTVSRSIRAGIIWINCYFA---------FDSD 375 (414)
Q Consensus 309 ~~~E~fgPvl~v~~~~~~~eai~~~n~----~~~gl~~sv~s~d~~~~~~~~~~l~~g~v~vN~~~~---------~~~~ 375 (414)
++|+||||++|++|+|+||||+++|+ .+|||+++|||+|.+.+++|++++++|+|+||++.. +.+.
T Consensus 335 -~~E~fgPVl~v~~~~~~dEAI~~an~~i~~~~~Glta~I~T~d~~~a~~f~~~i~ag~V~VN~~~~~~~~Ga~t~~~~~ 413 (488)
T TIGR02518 335 -SREKLTTILAFYTEENWHEACELSIELLQNEGAGHTLIIHSENKDIVREFALKKPVSRMLVNTGGSLGGIGATTNLVPA 413 (488)
T ss_pred -ccCccCceEEEEEeCCHHHHHHHHHHhhhcCCCCCeEEEEeCCHHHHHHHHHhCCeeEEEEcCCCcccccccccCCCcc
Confidence 79999999999999999999999887 699999999999999999999999999999997642 2222
Q ss_pred C--CccCCCCCCCCCcchHHHHHhhhcccEEEEeC
Q 015031 376 C--PYGGYKMSGFGRDCGLESLHNYLQVKSVVTPI 408 (414)
Q Consensus 376 ~--pfgG~~~sG~g~~~g~~~~~~~~~~k~i~~~~ 408 (414)
+ .||+++.+++. .+-+++++++.|++.+..
T Consensus 414 ~~~G~G~~~g~st~---~~v~~~~l~~~k~v~~~~ 445 (488)
T TIGR02518 414 FTLGCGAVGGSSTS---DNITPENLINIRRVAYGV 445 (488)
T ss_pred ccccccccCCCcCC---CCCCHHHhheeeEEEecc
Confidence 2 25555544443 388999999999998765
|
|
| >PLN02418 delta-1-pyrroline-5-carboxylate synthase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-68 Score=561.88 Aligned_cols=353 Identities=21% Similarity=0.245 Sum_probs=311.8
Q ss_pred CHHHHHHHHHhHHHHHHHH------HHHcC--CChHHHh---hccHHHHHHHHHHHHHhhhhhcCceec---cccCcccc
Q 015031 1 MLKFADLIEEHAEVLAVLE------ALDAG--KLHSWAK---MGDIPGAANTLRYYAGAADKIHGEVLK---MSRALQGY 66 (414)
Q Consensus 1 L~~~a~~l~~~~~~l~~~~------~~e~G--k~~~~~~---~~ev~~~~~~l~~~~~~~~~~~~~~~~---~~~~~~~~ 66 (414)
|+++++.|++|.++|++++ ++|+| ||..++. ..|+..+++.+++++... +..+...+ ...+...+
T Consensus 322 L~~~a~~l~~~~~ela~~~~~d~~~~~E~G~~k~~~~~~~~~~~ev~~~~~~~~~~a~~~-~~~g~~~~~~~~~~~~~~~ 400 (718)
T PLN02418 322 LLDVADALEANEELIKAENELDVAAAQEAGYEKSLVSRLTLKPGKIASLAASIRQLADME-DPIGRVLKRTEVADGLVLE 400 (718)
T ss_pred HHHHHHHHHHhHHHHHHHHHHhHHHHHHhCCchhHHHHHhccHHHHHHHHHHHHHHhcCc-cccCccccccccCCCceEE
Confidence 5789999999999999996 77999 8877643 459999999999999873 33343322 12233367
Q ss_pred ccccCCcEEEEEcCCCcChHhhHHHHHHHHhcCCeEEEecCCCChhHHHHHHHHHHHcCCCCCe----EEEEcCCchhHH
Q 015031 67 TLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGV----LNVVPGFGPTAG 142 (414)
Q Consensus 67 ~~~~P~Gvv~~i~p~n~P~~~~~~~~~~ALaaGN~vv~kps~~~~~~~~~l~~~~~~aglp~g~----v~~~~~~~~~~~ 142 (414)
..++|+|||++|+||| |+... +++++||++||+||+|||+.+|.++..+++++.++ +|+|+ +|++++ +.+++
T Consensus 401 ~~r~PlGVV~~I~Pwn-P~~~~-~kiapALaaGNtVVlKPse~tp~s~~~l~~l~~eA-lP~gv~~~v~nvv~g-~~~~g 476 (718)
T PLN02418 401 KTSCPLGVLLIIFESR-PDALV-QIASLAIRSGNGLLLKGGKEAARSNAILHKVITDA-IPKTVGGKLIGLVTS-RDEIP 476 (718)
T ss_pred EEEEeeeEEEEEeCCC-cHHHH-HHHHHHHHhCCEEEEeCCccchHHHHHHHHHHHHH-ccccCCcceEEEeCC-cHHHH
Confidence 8899999999999999 99999 89999999999999999999999999999999999 99995 999997 56789
Q ss_pred HHHHhCCCcCeEEEeCCHHHHHHHHHHHhhCCCCceeeeCCCCCceeecCCCCHHHHHHHHHHHHhcccCCccccCcEEE
Q 015031 143 AAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVY 222 (414)
Q Consensus 143 ~~l~~~~~~~~v~~tGs~~~~~~i~~~~~~~~~~~~~~e~gG~~~~iV~~dadl~~a~~~i~~~~~~~~Gq~C~a~~~v~ 222 (414)
..|..||.+|.|+||||+.. +.+.++ ..++|+++|+|||||+||++|||++.|++.+++++|.| ||.|++.+|+|
T Consensus 477 ~~L~~~~~v~~V~FTGSt~~---i~~~aa-~~~k~v~lELGGk~p~iV~~DADld~A~~~i~~~~~~n-GQ~C~a~~Rll 551 (718)
T PLN02418 477 DLLKLDDVIDLVIPRGSNKL---VSQIKA-STKIPVLGHADGICHVYVDKSADMDMAKRIVVDAKTDY-PAACNAMETLL 551 (718)
T ss_pred HHHhhCCCCCEEEEeCCHHH---HHHHHH-hcCCCEEEeCCCcceEEEeCCCCHHHHHHHHHHHhCCC-CCccccCcEEE
Confidence 99999999999999999964 444444 56899999999999999999999999999999999999 99999999999
Q ss_pred EeCccHHHHHHHHHHHHhccccCCCCCCCCCccccCCHHHHHHHHHHHHHhhhcCCeEeeCCcccCCCCceeeeEEEEeC
Q 015031 223 VQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIGKKGYYIEPTIFTNV 302 (414)
Q Consensus 223 V~~~~~~~f~~~l~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~~~g~~~~Ptvl~~~ 302 (414)
||+++||+ | .+.+++++++++|+++ +||... .| ++. +
T Consensus 552 Vh~~i~d~------------------------G---------~~~~~i~~a~~~Ga~l-~Gg~~~--~g------~l~-~ 588 (718)
T PLN02418 552 VHKDLVQN------------------------G---------GLNDLLVALRSAGVTL-YGGPRA--SK------LLN-I 588 (718)
T ss_pred Eecccccc------------------------c---------cHHHHHHHHHHCCCEE-ECCccc--cC------eeC-C
Confidence 99999997 1 2478999999999999 688643 23 233 3
Q ss_pred CCCCcccccccccceEEEeeeCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHHhccceeEEEECCcCCCCCCCCccCCC
Q 015031 303 TEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSIRAGIIWINCYFAFDSDCPYGGYK 382 (414)
Q Consensus 303 ~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~sv~s~d~~~~~~~~~~l~~g~v~vN~~~~~~~~~pfgG~~ 382 (414)
++|++++||+||||++|.+|+|.||||+++|+++|||+++|||+|.+.+.++++++++|.||||+++...+..||||+|
T Consensus 589 -~~~~i~~eE~FgPv~~i~~~~~~dEAI~~aN~s~yGLsa~V~T~d~~~a~~~a~~l~aG~V~IN~~~~~~~~~PfGG~k 667 (718)
T PLN02418 589 -PEAQSFHHEYSSLACTVEIVDDVHAAIDHIHRHGSAHTDCIVTEDSEVAEIFLRQVDSAAVFHNASTRFSDGARFGLGA 667 (718)
T ss_pred -CCchhhhCCcCCeeEEEEEECCHHHHHHHHhcCCCCCeeEEEcCCHHHHHHHHHhCCeeEEEEeCCCCCCCCCCCCCcc
Confidence 7899999999999999999999999999999999999999999999999999999999999999987666778999999
Q ss_pred CCCC--CCcc--hHHHHHhhhcccEEEEe
Q 015031 383 MSGF--GRDC--GLESLHNYLQVKSVVTP 407 (414)
Q Consensus 383 ~sG~--g~~~--g~~~~~~~~~~k~i~~~ 407 (414)
.||+ |+.+ |++|+++|++.|+++..
T Consensus 668 ~SG~stGr~~~~G~~gl~~~t~~K~v~~g 696 (718)
T PLN02418 668 EVGISTGRIHARGPVGVEGLLTTRWILRG 696 (718)
T ss_pred cccccCCcCCCCCHHHHHHHhcEEEEEEC
Confidence 9999 9875 99999999999999764
|
|
| >PRK13805 bifunctional acetaldehyde-CoA/alcohol dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-68 Score=575.36 Aligned_cols=390 Identities=21% Similarity=0.246 Sum_probs=334.9
Q ss_pred CHHHHHHHHHhHHHHHHHHHHHcCCChHHHhhccHHHHHHHHHHHHHhhhhhcCceeccccCccccccccCCcEEEEEcC
Q 015031 1 MLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMSRALQGYTLREPIGVVGHIIP 80 (414)
Q Consensus 1 L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p 80 (414)
|+++++.|++++++|++++++|+|||..++...+...+++.++++.. .++..+. +..+.....+.+++|+|||++|+|
T Consensus 40 l~~~a~~l~~~~~~la~~~~~EtGk~~~e~~~~~~~~~~~~~~~~~~-~~~~~g~-~~~~~~~~~~~~~~P~GVv~~I~p 117 (862)
T PRK13805 40 VRAAALAALDARIPLAKMAVEETGRGVVEDKVIKNHFASEYIYNSYK-DEKTVGV-IEEDDEFGIIEIAEPVGVIAGITP 117 (862)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHCCChHHHHHHHHHHHHHHHHHHhc-CCCcccc-cCcCCCCCeEEEeecceEEEEEeC
Confidence 57899999999999999999999999987543344444444443332 1122221 221223456788999999999999
Q ss_pred CCcChHhhHHHHHHHHhcCCeEEEecCCCChhHHHHHHHHHH----HcCCCCCeEEEEcCCchhHHHHHHhCCCcCeEEE
Q 015031 81 WNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAK----LAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSF 156 (414)
Q Consensus 81 ~n~P~~~~~~~~~~ALaaGN~vv~kps~~~~~~~~~l~~~~~----~aglp~g~v~~~~~~~~~~~~~l~~~~~~~~v~~ 156 (414)
||||+...++++++||++||+||+|||+.+|.++..+.+++. ++|+|+|++|++++++.+.++.|+.|+++|.|+|
T Consensus 118 wn~P~~~~~~~~~~ALaaGN~vVlKps~~a~~t~~~~~~l~~~~l~~aG~p~g~v~vv~g~~~~~~~~L~~~~~vd~I~f 197 (862)
T PRK13805 118 TTNPTSTAIFKALIALKTRNPIIFSFHPRAQKSSIAAAKIVLDAAVAAGAPKDIIQWIEEPSVELTNALMNHPGIALILA 197 (862)
T ss_pred CCChhHHHHHHHHHHHHhCCcEEEECCcchHHHHHHHHHHHHHHHHHcCcCcccEEEecCCCHHHHHHHHcCCCccEEEe
Confidence 999999999999999999999999999999999998888864 6899999999999877788999999999999999
Q ss_pred eCCHHHHHHHHHHHhhCCCCceeeeCCCCCceeecCCCCHHHHHHHHHHHHhcccCCccccCcEEEEeCccHHHHHHHHH
Q 015031 157 TGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLV 236 (414)
Q Consensus 157 tGs~~~~~~i~~~~~~~~~~~~~~e~gG~~~~iV~~dadl~~a~~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f~~~l~ 236 (414)
|||+..++ .++ .+++|+++|+|||+|+||++|||++.|++.|++++|+|+||.|+++++||||++++|+|+++|+
T Consensus 198 TGs~~v~~----~a~-~~~~pv~~e~gGk~p~iV~~dADl~~Aa~~i~~~k~~n~GQ~C~a~~~v~V~~~i~d~f~~~l~ 272 (862)
T PRK13805 198 TGGPGMVK----AAY-SSGKPALGVGAGNVPAYIDKTADIKRAVNDILLSKTFDNGMICASEQAVIVDDEIYDEVKEEFA 272 (862)
T ss_pred cCCHHHHH----HHH-hcCCCeEEECCCCCeEEEeCCCCHHHHHHHHHHhhhccCCCccCCCceEEEehhhHHHHHHHHH
Confidence 99998643 333 6789999999999999999999999999999999999999999999999999999999999998
Q ss_pred HHHhccccCCCCCCCCCccccCCHHHHHHHHHHHHHhhhcCCeE-eeCCccc---CCCCceeeeEE------EEeCCCCC
Q 015031 237 EKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATL-LTGGKPI---GKKGYYIEPTI------FTNVTEDM 306 (414)
Q Consensus 237 ~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ga~v-~~gg~~~---~~~g~~~~Ptv------l~~~~~~~ 306 (414)
++. +|+++.+++++++++++++...+... ++||... ...|.+++||+ +.+++++|
T Consensus 273 ~~g---------------~~l~~~~~~~~v~~~i~~a~~~~~~~~~~g~~~~~~~~~~G~~~~p~~~~~i~~l~~v~~~~ 337 (862)
T PRK13805 273 SHG---------------AYFLNKKELKKLEKFIFGKENGALNADIVGQSAYKIAEMAGFKVPEDTKILIAEVKGVGESE 337 (862)
T ss_pred HhC---------------CeeCCHHHHHHHHHHHhhccCCCcCccccCCCHHHHHHHcCCCCCCCCeEEEEecCCCCCCC
Confidence 762 58999999999999999887655432 4566421 12488899997 66788999
Q ss_pred cccccccccceEEEeeeCCHHHHHHHHhc----CCCCceEEEecCCHHHHHHHHhccceeEEEECCcC----------CC
Q 015031 307 LIAKNEIFGPVMALMKFKTVEEAIKSANN----TRYGLAAGIMTKDLNVANTVSRSIRAGIIWINCYF----------AF 372 (414)
Q Consensus 307 ~~~~~E~fgPvl~v~~~~~~~eai~~~n~----~~~gl~~sv~s~d~~~~~~~~~~l~~g~v~vN~~~----------~~ 372 (414)
++++ |+||||++|++|+|+||||+++|+ .++||+++|||+|.+.++++++++++|+|+||.+. .+
T Consensus 338 ~~~~-E~fgPVl~v~~~~~~deAi~~~n~~~~~~~~gl~~~i~t~d~~~~~~~~~~l~~g~v~vN~~~~~~~~~~~~~~~ 416 (862)
T PRK13805 338 PLSH-EKLSPVLAMYKAKDFEDAVEKAEKLVEFGGLGHTAVIYTNDDELIKEFGLRMKACRILVNTPSSQGGIGDLYNKL 416 (862)
T ss_pred cchh-cccCcEEEEEEECCHHHHHHHHHHHHhcCCCCcEEEEECCCHHHHHHHHhhCCccEEEEeCCccccccccccCCc
Confidence 9877 799999999999999999999988 48999999999999999999999999999999885 36
Q ss_pred CCCCCccCCCCCCCCCcchHHHHHhhhcccEEEEeCCCCCCC
Q 015031 373 DSDCPYGGYKMSGFGRDCGLESLHNYLQVKSVVTPIFNSPWL 414 (414)
Q Consensus 373 ~~~~pfgG~~~sG~g~~~g~~~~~~~~~~k~i~~~~~~~~~~ 414 (414)
.+.+|||| |.||+|+++|+.|+++|++.|+|..+.....||
T Consensus 417 ~~~~~fG~-G~~g~~~~~g~~g~~~~~~~k~v~~~~~~~~~~ 457 (862)
T PRK13805 417 APSLTLGC-GSWGGNSVSENVGAKHLLNIKTVAKRRENMQWF 457 (862)
T ss_pred Cccccccc-cCCCCCcCCCCCCHHHhheeeeeeeccccceee
Confidence 78899997 999999999999999999999999887777776
|
|
| >cd06534 ALDH-SF NAD(P)+-dependent aldehyde dehydrogenase superfamily | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.1e-66 Score=508.46 Aligned_cols=343 Identities=51% Similarity=0.817 Sum_probs=321.3
Q ss_pred CHHHHHHHHHhHHHHHHHHHHHcCCChHHHhhccHHHHHHHHHHHHHhhhhhcCcee-ccccCccccccccCCcEEEEEc
Q 015031 1 MLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVL-KMSRALQGYTLREPIGVVGHII 79 (414)
Q Consensus 1 L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~~~~~~~~~~-~~~~~~~~~~~~~P~Gvv~~i~ 79 (414)
|+++++.|.++.++|+++++.|+|||..+ ...|+..+++.++++++..++..+... ....+...+.+++|+|||++|+
T Consensus 22 l~~l~~~l~~~~~~l~~~~~~e~Gk~~~~-~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~Gvv~~i~ 100 (367)
T cd06534 22 LRKIADLLEERREELAALETLETGKPIEE-ALGEVARAIDTFRYAAGLADKLGGPELPSPDPGGEAYVRREPLGVVGVIT 100 (367)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHcCCCHHH-HHHHHHHHHHHHHHHHHHHHHhcCCcccccCCCceeEEEEEeeeEEEEEC
Confidence 57899999999999999999999999986 567999999999999988876654222 2235667889999999999999
Q ss_pred CCCcChHhhHHHHHHHHhcCCeEEEecCCCChhHHHHHHHHHHHcCCCCCeEEEEcCCchhHHHHHHhCCCcCeEEEeCC
Q 015031 80 PWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGS 159 (414)
Q Consensus 80 p~n~P~~~~~~~~~~ALaaGN~vv~kps~~~~~~~~~l~~~~~~aglp~g~v~~~~~~~~~~~~~l~~~~~~~~v~~tGs 159 (414)
|||+|+...++.+++||++||+||+|||+.+|.++..+.++|.++|+|+++++++++++.+..+.|..|+++|.|.||||
T Consensus 101 p~n~p~~~~~~~~~~aL~~GN~vilk~s~~~~~~~~~l~~~l~~ag~p~~~v~~~~~~~~~~~~~l~~~~~vd~v~~tGs 180 (367)
T cd06534 101 PWNFPLLLAAWKLAPALAAGNTVVLKPSELTPLTALALAELLQEAGLPPGVVNVVPGGGDEVGAALLSHPRVDKISFTGS 180 (367)
T ss_pred CCchHHHHHHHHHHHHHHcCCEEEEECCCcchHHHHHHHHHHHhcCCCcCeEEEEEcCchhHHHHHhcCCCcCEEEEECC
Confidence 99999999999999999999999999999999999999999999999999999999977678899999999999999999
Q ss_pred HHHHHHHHHHHhhCCCCceeeeCCCCCceeecCCCCHHHHHHHHHHHHhcccCCccccCcEEEEeCccHHHHHHHHHHHH
Q 015031 160 TDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKA 239 (414)
Q Consensus 160 ~~~~~~i~~~~~~~~~~~~~~e~gG~~~~iV~~dadl~~a~~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f~~~l~~~~ 239 (414)
+++++.+.+.++ ++++|+++|++|+|++||++|+|++.|++.+++++|+++||.|+++++||||++++|+|+++|+
T Consensus 181 ~~~~~~v~~~~~-~~~~~~~~e~~g~~~~iV~~~ad~~~aa~~i~~~~~~~~gq~C~s~~~v~v~~~~~~~f~~~l~--- 256 (367)
T cd06534 181 TAVGKAIMKAAA-ENLKPVTLELGGKSPVIVDEDADLDAAVEGAVFGAFFNAGQICTAASRLLVHESIYDEFVEKLV--- 256 (367)
T ss_pred HHHHHHHHHHHh-cCCCeEEEEcCCCCeEEECCCCCHHHHHHHHHHHHHhcCCCCCCCCcEEEEcHHHHHHHHHhhc---
Confidence 999999999987 7789999999999999999999999999999999999999999999999999999999999987
Q ss_pred hccccCCCCCCCCCccccCCHHHHHHHHHHHHHhhhcCCeEeeCCcccCCCCceeeeEEEEeCCCCCcccccccccceEE
Q 015031 240 KAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIGKKGYYIEPTIFTNVTEDMLIAKNEIFGPVMA 319 (414)
Q Consensus 240 ~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~ 319 (414)
||+.+++++++++++|+|||+++
T Consensus 257 ---------------------------------------------------------tl~~~~~~~~~~~~~E~fgPv~~ 279 (367)
T cd06534 257 ---------------------------------------------------------TVLVDVDPDMPIAQEEIFGPVLP 279 (367)
T ss_pred ---------------------------------------------------------eeeeCCCCCCccccCCccCceEE
Confidence 67777888899999999999999
Q ss_pred EeeeCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHHhccceeEEEECCcCCC-CCCCCccCCCCCCCCCcchHHHHHhh
Q 015031 320 LMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSIRAGIIWINCYFAF-DSDCPYGGYKMSGFGRDCGLESLHNY 398 (414)
Q Consensus 320 v~~~~~~~eai~~~n~~~~gl~~sv~s~d~~~~~~~~~~l~~g~v~vN~~~~~-~~~~pfgG~~~sG~g~~~g~~~~~~~ 398 (414)
|++|++++||++++|++++||++||||+|.+.++++++++++|+|+||+++.. .+..||||.+.||+|+++|++++++|
T Consensus 280 v~~~~~~~eai~~~n~~~~gl~~~i~t~d~~~~~~~~~~~~~g~v~iN~~~~~~~~~~pfgg~~~sG~g~~~g~~~~~~~ 359 (367)
T cd06534 280 VIRFKDEEEAIALANDTEYGLTAGVFTRDLNRALRVAERLRAGTVYINDSSIGVGPEAPFGGVKNSGIGREGGPYGLEEY 359 (367)
T ss_pred EEecCCHHHHHHHHhCCCCCCeEEEECCCHHHHHHHHHhCCcceEEECCCCCCCCCCCCCCCcccCccCCCChHHHHHHh
Confidence 99999999999999999999999999999999999999999999999998876 78899999999999999999999999
Q ss_pred hcccEEE
Q 015031 399 LQVKSVV 405 (414)
Q Consensus 399 ~~~k~i~ 405 (414)
|++|++.
T Consensus 360 ~~~k~i~ 366 (367)
T cd06534 360 TRTKTVV 366 (367)
T ss_pred ceEEEEe
Confidence 9999874
|
The aldehyde dehydrogenase superfamily (ALDH-SF) of NAD(P)+-dependent enzymes, in general, oxidize a wide range of endogenous and exogenous aliphatic and aromatic aldehydes to their corresponding carboxylic acids and play an important role in detoxification. Besides aldehyde detoxification, many ALDH isozymes possess multiple additional catalytic and non-catalytic functions such as participating in metabolic pathways, or as binding proteins, or osmoregulants, to mention a few. The enzyme has three domains, a NAD(P)+ cofactor-binding domain, a catalytic domain, and a bridging domain; and the active enzyme is generally either homodimeric or homotetrameric. The catalytic mechanism is proposed to involve cofactor binding, resulting in a conformational change and activation of an invariant catalytic cysteine nucleophile. The cysteine and aldehyde substrate form an oxyanion thiohemiacetal intermediate resulting in hydri |
| >cd07077 ALDH-like NAD(P)+-dependent aldehyde dehydrogenase-like (ALDH-like) family | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-66 Score=517.22 Aligned_cols=353 Identities=19% Similarity=0.171 Sum_probs=314.4
Q ss_pred CHHHHHHHHHhHHHHHHHHHHHcCCChHHHh----------hccHHHHHHHHHHHHHhhhhhcCceeccccCcccccccc
Q 015031 1 MLKFADLIEEHAEVLAVLEALDAGKLHSWAK----------MGDIPGAANTLRYYAGAADKIHGEVLKMSRALQGYTLRE 70 (414)
Q Consensus 1 L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~~~----------~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 70 (414)
|+++++.|++|+++|+++++.|+||++.+.. ..|+..+++.+++++....+..+...+. ....+.+++
T Consensus 22 L~~~a~~l~~~~~~la~~~~~e~gk~~~~~~~~~~~~~~~~~~ev~~~~~~~~~~a~~~~~~~~~~~~~--~~~~~~~~~ 99 (397)
T cd07077 22 INAIANALYDTRQRLASEAVSERGAYIRSLIANWIAMMGCSESKLYKNIDTERGITASVGHIQDVLLPD--NGETYVRAF 99 (397)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhhcccHHHHHHhCCcHHHHHHHHHHHHHHHHhcCcccceEecC--CCceEEEEe
Confidence 5789999999999999999999999865321 1378889999999887655444332221 235688999
Q ss_pred CCcEEEEEcCCCcChHhhHHHHHHHHhcCCeEEEecCCCChhHHHHHHHHHHHc---CCCCCeEEEEcCCchhHHHHHHh
Q 015031 71 PIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLA---GVPDGVLNVVPGFGPTAGAAIAS 147 (414)
Q Consensus 71 P~Gvv~~i~p~n~P~~~~~~~~~~ALaaGN~vv~kps~~~~~~~~~l~~~~~~a---glp~g~v~~~~~~~~~~~~~l~~ 147 (414)
|+|||++|+|||||+. .++++++||++||+||+|||+.+|.++..+.+++.++ |+|+++++++++.+.+.+..|+.
T Consensus 100 P~Gvv~~i~p~N~P~~-~~~~~~~aL~aGN~vilKps~~~p~~~~~l~~~~~~~~~~g~p~~~v~~v~~~~~~~~~~l~~ 178 (397)
T cd07077 100 PIGVTMHILPSTNPLS-GITSALRGIATRNQCIFRPHPSAPFTNRALALLFQAADAAHGPKILVLYVPHPSDELAEELLS 178 (397)
T ss_pred cceEEEEEeCCCCchH-HHHHHHHHHHcCCcEEEEcCcchhhHHHHHHHHHHHHhhcCCCCceEEEecCCCHHHHHHHHc
Confidence 9999999999999999 9999999999999999999999999999999999887 99999999999877788999999
Q ss_pred CCCcCeEEEeCCHHHHHHHHHHHhhCCCCceeeeCCCCCceeecCCCCHHHHHHHHHHHHhcccCCccccCcEEEEeCcc
Q 015031 148 HMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGI 227 (414)
Q Consensus 148 ~~~~~~v~~tGs~~~~~~i~~~~~~~~~~~~~~e~gG~~~~iV~~dadl~~a~~~i~~~~~~~~Gq~C~a~~~v~V~~~~ 227 (414)
|+++|.|+||||+.+++.+.+.+. .+|++.|+||++++||++|||++.|++.+++++|+| ||.|+++++||||+++
T Consensus 179 ~~~vd~v~ftGs~~~~~~v~~~~~---~~~~~~~~gg~~~~iv~~dad~~~a~~~~~~~~~~~-GQ~C~a~~~v~V~~~i 254 (397)
T cd07077 179 HPKIDLIVATGGRDAVDAAVKHSP---HIPVIGFGAGNSPVVVDETADEERASGSVHDSKFFD-QNACASEQNLYVVDDV 254 (397)
T ss_pred CCCCCEEEecCCHHHHHHHHHcCC---CCceEEecCCcceEEEcCCCCHHHHHHHHHHhhccC-CccCCCCeEEEEehhh
Confidence 999999999999999999987752 689999999999999999999999999999999999 9999999999999999
Q ss_pred HHHHHHHHHHHHhccccCCCCCCCCCccccCCHHHHHHHHHHHHHhhhcCCeEeeCCcccCCCCceeeeEEEEeCCCCCc
Q 015031 228 YDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIGKKGYYIEPTIFTNVTEDML 307 (414)
Q Consensus 228 ~~~f~~~l~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~ 307 (414)
||+|+++|+++++. .|++++.||+ +.|+.|| ++|.
T Consensus 255 ~d~~~~~l~~~~~~----------------------------------~G~~~~~g~~-----~~~~~pt------~~~~ 289 (397)
T cd07077 255 LDPLYEEFKLKLVV----------------------------------EGLKVPQETK-----PLSKETT------PSFD 289 (397)
T ss_pred hHHHHHHHHHHHHh----------------------------------cCcCcCCCce-----eeEEecc------CCCC
Confidence 99999999988764 3566666653 3677776 7888
Q ss_pred ccccccccceEEEeeeCCHH----HHHHHHhcCCCCceEEEecCCHHHHHHHHhccceeEEEECCcCCCC--CCCCccCC
Q 015031 308 IAKNEIFGPVMALMKFKTVE----EAIKSANNTRYGLAAGIMTKDLNVANTVSRSIRAGIIWINCYFAFD--SDCPYGGY 381 (414)
Q Consensus 308 ~~~~E~fgPvl~v~~~~~~~----eai~~~n~~~~gl~~sv~s~d~~~~~~~~~~l~~g~v~vN~~~~~~--~~~pfgG~ 381 (414)
+.++|+||||++|++|+|.| +|++++|+++|||+++|||+|.+.++++++++++|.|+||++.... ..+||||.
T Consensus 290 ~~~~E~FgPvl~v~~~~~~~eai~~ai~~~n~~~~gl~~~Ift~d~~~~~~~~~~l~~G~v~vN~~~~~~~~~~~~~gg~ 369 (397)
T cd07077 290 DEALESMTPLECQFRVLDVISAVENAWMIIESGGGPHTRCVYTHKINKVDDFVQYIDTASFYPNESSKKGRGAFAGKGVE 369 (397)
T ss_pred hhhhhhhCceeEEEEEcchHHHHHHHHHHHHhcCCCCceEEEeCCHHHHHHHHHhCCEEEEEEeCCccCCCccccCCCcc
Confidence 99999999999999999986 6667889999999999999999999999999999999999987644 66899999
Q ss_pred C--CCCCCCcch-HHHHHhhhcccEEE
Q 015031 382 K--MSGFGRDCG-LESLHNYLQVKSVV 405 (414)
Q Consensus 382 ~--~sG~g~~~g-~~~~~~~~~~k~i~ 405 (414)
+ .||+|+++| .+++++|++.|+++
T Consensus 370 ~~~~SG~g~~~g~~~~~~~~~~~k~v~ 396 (397)
T cd07077 370 RIVTSGMNNIFGAGVGHDALRPLKRLV 396 (397)
T ss_pred eEEEccccCCCCCCCChHHhcceeEee
Confidence 9 899999999 99999999999875
|
The aldehyde dehydrogenase-like (ALDH-like) group of the ALDH superfamily of NAD(P)+-dependent enzymes which, in general, oxidize a wide range of endogenous and exogenous aliphatic and aromatic aldehydes to their corresponding carboxylic acids and play an important role in detoxification. This group includes families ALDH18, ALDH19, and ALDH20 and represents such proteins as gamma-glutamyl phosphate reductase, LuxC-like acyl-CoA reductase, and coenzyme A acylating aldehyde dehydrogenase. All of these proteins have a conserved cysteine that aligns with the catalytic cysteine of the ALDH group. |
| >COG4230 Delta 1-pyrroline-5-carboxylate dehydrogenase [Energy production and conversion] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.7e-65 Score=491.53 Aligned_cols=390 Identities=31% Similarity=0.486 Sum_probs=354.4
Q ss_pred CHHHHHHHHHhHHHHHHHHHHHcCCChHHHhhccHHHHHHHHHHHHHhhhhhcCceeccccCccccccccCCcEEEEEcC
Q 015031 1 MLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMSRALQGYTLREPIGVVGHIIP 80 (414)
Q Consensus 1 L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p 80 (414)
|++++|+++.+..+|..++++|.||++..+ ..||..++++||||+.+++.-.+ -...+|+|.+++|+|
T Consensus 178 L~raAdlme~~m~~L~~L~~REAGKtl~na-IAEVREAVDFlrYYA~~ar~~~g-----------~~~~~~~G~vVcISP 245 (769)
T COG4230 178 LERAADLMEAQMPQLMGLLVREAGKTLSNA-IAEVREAVDFLRYYAGQARDTFG-----------NLTHRPLGPVVCISP 245 (769)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhccchhhH-HHHHHHHHHHHHHHHHHHhcccC-----------ccccCCCCcEEEECC
Confidence 689999999999999999999999999975 67999999999999998765221 156789999999999
Q ss_pred CCcChHhhHHHHHHHHhcCCeEEEecCCCChhHHHHHHHHHHHcCCCCCeEEEEcCCchhHHHHHHhCCCcCeEEEeCCH
Q 015031 81 WNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGST 160 (414)
Q Consensus 81 ~n~P~~~~~~~~~~ALaaGN~vv~kps~~~~~~~~~l~~~~~~aglp~g~v~~~~~~~~~~~~~l~~~~~~~~v~~tGs~ 160 (414)
||||+..+..+++.||++||+|+-||.+++|+.+..-.+++.++|+|++++|++||+|+.++..|..++++++|+||||+
T Consensus 246 WNFPLAIFtGqiaAAL~aGN~VlAKPAEqTpLIAa~aV~ll~eAGvP~~~lqLLpG~G~tvGa~L~~darv~GV~FTGST 325 (769)
T COG4230 246 WNFPLAIFTGQIAAALAAGNSVLAKPAEQTPLIAAQAVRLLHEAGVPPGVLQLLPGRGETVGAALTADARVAGVMFTGST 325 (769)
T ss_pred CCchHHHHHhHHHHHHHcCCccccCccccccHHHHHHHHHHHHcCCChhhHHhcCCCCcccchhhhcCcccceEEEeCcH
Confidence 99999999999999999999999999999999999999999999999999999999998899999999999999999999
Q ss_pred HHHHHHHHHHhhCCC--CceeeeCCCCCceeecCCCCHHHHHHHHHHHHhcccCCccccCcEEEEeCccHHHHHHHHHHH
Q 015031 161 DVGRQVMQAAATSNL--KPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEK 238 (414)
Q Consensus 161 ~~~~~i~~~~~~~~~--~~~~~e~gG~~~~iV~~dadl~~a~~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f~~~l~~~ 238 (414)
++++.|.+..+.+.+ .|++.|.||.|.|||+++|--|.++.+++.|+|..+||+|++.+.+++++++.|..++.|+-.
T Consensus 326 evA~li~~~LA~r~g~~~pLIAETGGqNAMIVDSsAL~EQVv~Dvl~SAFdSAGQRCSALRvLclQ~DvAd~~l~mLKGA 405 (769)
T COG4230 326 EVARLIQRQLAKRQGRPIPLIAETGGQNAMIVDSSALAEQVVADVLASAFDSAGQRCSALRVLCLQEDVADRILTMLKGA 405 (769)
T ss_pred HHHHHHHHHHhhcCCCCCceEeccCCcceEEeechhhHHHHHHHHHHHHhhcccchhhhhhhhhhhhhHHHHHHHHHHHH
Confidence 999999999885454 589999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhccccCCCCCCCCCccccCCHHHHHHHHHHHHHhhhcCCeEeeCCcccC-CCCceeeeEEEEeCCCCCcccccccccce
Q 015031 239 AKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIG-KKGYYIEPTIFTNVTEDMLIAKNEIFGPV 317 (414)
Q Consensus 239 ~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~-~~g~~~~Ptvl~~~~~~~~~~~~E~fgPv 317 (414)
+..+++|+|..-.+|+||+|+.+..+.+++.|+..+..|-.+..-..... ..|.|+.||++.-. +..-+++|+||||
T Consensus 406 m~el~~G~p~~l~tDVGPVIdaEAk~~i~~Hi~~mr~~gr~v~q~~~~~~~q~GtFv~Ptl~El~--~~~eL~rEVFGPV 483 (769)
T COG4230 406 MAELRVGNPDRLTTDVGPVIDAEAKANIEKHIQTMRSKGRLVHQAAAPNSLQKGTFVAPTLIELE--NLDELQREVFGPV 483 (769)
T ss_pred HHHhccCCccceeccccccccHHHHHHHHHHHHHHHhcccchhhccCCCccCCceeeCceeEEcC--CHHHHHHHhccce
Confidence 99999999999999999999999999999999998888744433222221 37999999999532 2233589999999
Q ss_pred EEEeeeC--CHHHHHHHHhcCCCCceEEEecCCHHHHHHHHhccceeEEEECCcCC--CCCCCCccCCCCCCCC-CcchH
Q 015031 318 MALMKFK--TVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSIRAGIIWINCYFA--FDSDCPYGGYKMSGFG-RDCGL 392 (414)
Q Consensus 318 l~v~~~~--~~~eai~~~n~~~~gl~~sv~s~d~~~~~~~~~~l~~g~v~vN~~~~--~~~~~pfgG~~~sG~g-~~~g~ 392 (414)
+.|++|+ ++++.|+-+|.++|||+.+|||+-.+.+.++.+++++|++|||.-.. ...-.||||.|-||+| ..+|+
T Consensus 484 LHVvRy~~~~l~~vi~~INatGyGLT~GvHtRideti~~v~~~~~aGNlYVNRN~vGAVVGVQPFGG~GLSGTGPKAGGp 563 (769)
T COG4230 484 LHVVRYKRDELDEVIDQINATGYGLTLGVHTRIDETIAHVTERAHAGNLYVNRNIVGAVVGVQPFGGEGLSGTGPKAGGP 563 (769)
T ss_pred eEEEEecHHHHHHHHHHHhccCcceeeeeecchHHHHHHHHhhccccceEeeccceeeEEeeccCCCCCCCCCCCCCCCh
Confidence 9999996 69999999999999999999999999999999999999999998755 4467899999999999 68899
Q ss_pred HHHHhhhcccEE
Q 015031 393 ESLHNYLQVKSV 404 (414)
Q Consensus 393 ~~~~~~~~~k~i 404 (414)
..+..|...+..
T Consensus 564 ~YL~Rl~~~~p~ 575 (769)
T COG4230 564 LYLLRLVSERPW 575 (769)
T ss_pred HHHHHHHhcCCc
Confidence 999999876553
|
|
| >TIGR00407 proA gamma-glutamyl phosphate reductase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-64 Score=499.52 Aligned_cols=356 Identities=19% Similarity=0.183 Sum_probs=300.2
Q ss_pred CHHHHHHHHHhHHHHHHH------HHHHcCCCh--HH---HhhccHHHHHHHHHHHHHhhhhhcCceecc---ccCcccc
Q 015031 1 MLKFADLIEEHAEVLAVL------EALDAGKLH--SW---AKMGDIPGAANTLRYYAGAADKIHGEVLKM---SRALQGY 66 (414)
Q Consensus 1 L~~~a~~l~~~~~~l~~~------~~~e~Gk~~--~~---~~~~ev~~~~~~l~~~~~~~~~~~~~~~~~---~~~~~~~ 66 (414)
|+++++.|++|+++|+++ +++|+|||. .+ ....|+..+++.+++++..++.. +..++. ..+...+
T Consensus 20 L~~~a~~l~~~~~~la~~~~~d~a~~~E~Gk~~~~~~~l~~a~~ev~~~~~~~~~~a~~a~~~-g~~~~~~~~~~~~~~~ 98 (398)
T TIGR00407 20 LSKIADGLEAQAPAILAANAKDIAVAKENGLADALLDRLLLTEGRLKGIADGVKDVIELADPV-GKVIDGRELDSGLTLE 98 (398)
T ss_pred HHHHHHHHHhChHHHHHHhHHHHHHHHHcCCCHHHHHHHcCCHHHHHHHHHHHHHHhcCCCCC-cccccceecCCCceEE
Confidence 578999999999999999 999999993 22 13468999999999999887653 443322 2345678
Q ss_pred ccccCCcEEEEEcCCCcChHhhHHHHHHHHhcCCeEEEecCCCChhHHHHHHHH----HHHcCCCCCeEEEEcCCc-hhH
Q 015031 67 TLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHL----AKLAGVPDGVLNVVPGFG-PTA 141 (414)
Q Consensus 67 ~~~~P~Gvv~~i~p~n~P~~~~~~~~~~ALaaGN~vv~kps~~~~~~~~~l~~~----~~~aglp~g~v~~~~~~~-~~~ 141 (414)
.+++|+|||++|+||| | ...++++++||++||+||+|||+.+|.++..+.++ +.++|+|+|++|++++.+ .+.
T Consensus 99 ~~~~PlGVV~~I~pw~-p-~~~~~~~~~ALaaGN~vVlKps~~tp~~~~~l~~~~~~al~eaGlP~gvv~~v~g~~~~~~ 176 (398)
T TIGR00407 99 RVRVPLGVLGVIYEAR-P-NVTVDIASLCLKTGNAVILRGGKEAVRSNKALVEVIQDALAQTGLPVGAVQLIETPSRELV 176 (398)
T ss_pred EEEeCcEEEEEEeCCC-c-hHHHHHHHHHHHhCCeEEECCChhhHHHHHHHHHHHHHHHHHcCCChhHEEEecCCCHHHH
Confidence 8999999999999997 7 66888999999999999999999999999999999 569999999999999754 457
Q ss_pred HHHHHhCCCcCeEEEeCCHHHHHHHHHHHhhCCCCceeeeCCCCCceeecCCCCHHHHHHHHHHHHhcccCCccccCcEE
Q 015031 142 GAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRV 221 (414)
Q Consensus 142 ~~~l~~~~~~~~v~~tGs~~~~~~i~~~~~~~~~~~~~~e~gG~~~~iV~~dadl~~a~~~i~~~~~~~~Gq~C~a~~~v 221 (414)
+..|..||++|.|+||||+.+++.+.+. ..+|+++|+|||||+||++|||++.|++.+++++|. +||.|++++|+
T Consensus 177 ~~~l~~~~~v~~v~fTGs~~vg~~~~~~----~~~~~~~e~gGk~p~iV~~dADl~~Aa~~iv~~~~~-~GQ~C~a~~rv 251 (398)
T TIGR00407 177 SELLDLDEYIDLLIPRGGNGLVRLIKQT----STIPVLGHGDGICHIYLDESADLIKAIKVIVNAKTQ-RPSTCNAIETL 251 (398)
T ss_pred HHHHhCCCCeeEEEecCCHHHHHHHHHh----CCCCEEEecCCcceEEEeCCCCHHHHHHHHHhhhcC-CCCcccccceE
Confidence 8889999999999999999999988764 358999999999999999999999999999999996 59999999999
Q ss_pred EEeCccHHHHHHHHHHHHhccccCCCCCCCCCccccCCHHHHHHHHHHHHHhhhcCCeEeeCCcccCCCCceeeeEEEEe
Q 015031 222 YVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIGKKGYYIEPTIFTN 301 (414)
Q Consensus 222 ~V~~~~~~~f~~~l~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~~~g~~~~Ptvl~~ 301 (414)
|||+++||+|+++|+++++++++. +++ .+.+++++.. || ||++
T Consensus 252 ~V~~~v~d~f~~~l~~~~~~~~~~--------~~~------~~~i~~~v~~----------g~-----------~tv~-- 294 (398)
T TIGR00407 252 LVNKAIAREFLPVLENQLLEKGVT--------IHA------DAYALKLLEL----------GP-----------ATEA-- 294 (398)
T ss_pred EEeHHHHHHHHHHHHHHHHhcCCE--------Eec------CHHHHHHHhc----------cC-----------cccc--
Confidence 999999999999999999876431 221 1334444321 11 3554
Q ss_pred CCCCCcccccccccceEEEeeeCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHHhccceeEEEECCcCCCCCCCCccCC
Q 015031 302 VTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSIRAGIIWINCYFAFDSDCPYGGY 381 (414)
Q Consensus 302 ~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~sv~s~d~~~~~~~~~~l~~g~v~vN~~~~~~~~~pfgG~ 381 (414)
+.+|++++||+||||++|++|+|+||||+++|+++|||++||||+|.+.++++++++++|.|+||++....+..|||=-
T Consensus 295 -~~~~~i~~eE~FgPvl~v~~~~~~~eAi~~aN~~~~GL~a~I~t~d~~~a~~~a~~i~~G~v~iN~~~~~~~~~pfG~~ 373 (398)
T TIGR00407 295 -IVCKTDFDKEFLSLDLSVKIVESLEAAIQHINQYGTQHSDAILTENKANAEQFQNGVDSAAVYHNASTRFTDGFRFGFG 373 (398)
T ss_pred -ccccccccchhhCceeEEEEECCHHHHHHHHHHhCCCCceEEEeCCHHHHHHHHHhCCeeEEEEeCCCCcCCCcccccc
Confidence 2337899999999999999999999999999999999999999999999999999999999999999877777899832
Q ss_pred CCCCC----CCcchHHHHHhhhccc
Q 015031 382 KMSGF----GRDCGLESLHNYLQVK 402 (414)
Q Consensus 382 ~~sG~----g~~~g~~~~~~~~~~k 402 (414)
.+-|. ....|+.+++.||..|
T Consensus 374 ~~~~~~~~~~~~rg~~~~~~~~~~~ 398 (398)
T TIGR00407 374 AEVGISTQKLHARGPMGLEALTSYK 398 (398)
T ss_pred eeeEEecCCCcCCCCcCHHHhcCCC
Confidence 33232 3456999999998765
|
The prosite motif begins at residue 332 of the seed alignment although not all of the members of the family exactly obey the motif. |
| >KOG2455 consensus Delta-1-pyrroline-5-carboxylate dehydrogenase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=4e-65 Score=478.04 Aligned_cols=403 Identities=28% Similarity=0.438 Sum_probs=365.0
Q ss_pred HHHHHHHH-HhHHHHHHHHHHHcCCChHHHhhccHHHHHHHHHHHHHhhhhhcCceecc-ccCccccccccCC-cEEEEE
Q 015031 2 LKFADLIE-EHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKM-SRALQGYTLREPI-GVVGHI 78 (414)
Q Consensus 2 ~~~a~~l~-~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~~~~~~~~~~~~-~~~~~~~~~~~P~-Gvv~~i 78 (414)
+|.|+++. +++-+|....++.+||+..++..+-..+.++.+|+.+..+.++....... ..+..+..+++|+ |.|+.|
T Consensus 125 lkAAdlistkyr~~l~aatMlgqgKt~~qAeiDa~~eLidf~R~na~ya~eL~~~qpi~~~~~t~ns~~yRpleGFVaAi 204 (561)
T KOG2455|consen 125 LKAADLISTKYRYDLLAATMLGQGKTAIQAEIDAAAELIDFFRFNAKYASELYAQQPISQTKGTWNSMEYRPLEGFVAAI 204 (561)
T ss_pred HHHHHHhcchHHHHHHHHHHhcCCcchHHHHHHHHHHHHHHHHHhHHHHHHhhhcCCccccCCCCcceeeccccceeEEe
Confidence 57888888 88889999999999999997543336688889999988887765442222 3556677777775 999999
Q ss_pred cCCCcChHhhHHHHHHHHhcCCeEEEecCCCChhHHHHHHHHHHHcCCCCCeEEEEcCCchhHHHHHHhCCCcCeEEEeC
Q 015031 79 IPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTG 158 (414)
Q Consensus 79 ~p~n~P~~~~~~~~~~ALaaGN~vv~kps~~~~~~~~~l~~~~~~aglp~g~v~~~~~~~~~~~~~l~~~~~~~~v~~tG 158 (414)
+|+||-....-...+||| +||+|+||||..+.++...+.++|+|||+|+|++|++|++++..++.+..+|++.++.|||
T Consensus 205 sPFnftAI~gnLa~aPaL-MGN~VLwkPS~ta~lssYii~~il~EAGlP~GvinFvPad~~~f~dtita~~hfaglnftg 283 (561)
T KOG2455|consen 205 SPFNFTAIGGNLAGAPAL-MGNVVLWKPSDTAALSSYIIYRILREAGLPPGVINFVPADGPLFGDTITASPHFAGLNFTG 283 (561)
T ss_pred cccceeeeccccccChhh-hcceeeecccchhHHHHHHHHHHHHHcCCCccceeeccCCCCeecceeccCcccceeeeec
Confidence 999999988888889999 6999999999999999999999999999999999999999999999999999999999999
Q ss_pred CHHHHHHHHHHHh-----hCCCCceeeeCCCCCceeecCCCCHHHHHHHHHHHHhcccCCccccCcEEEEeCccHHHHHH
Q 015031 159 STDVGRQVMQAAA-----TSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEK 233 (414)
Q Consensus 159 s~~~~~~i~~~~~-----~~~~~~~~~e~gG~~~~iV~~dadl~~a~~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f~~ 233 (414)
|..+-+.+.+..+ +....+++.|+||||.-+|+++||++.++...++++|.++||.|.+.+|+||++++++.+.+
T Consensus 284 S~~~fk~lwk~V~~n~~~Y~~fPrlvgEcgGkNFHfVH~SA~VesvV~~TvrsAfey~GQkcsA~SRmYvp~s~wp~i~e 363 (561)
T KOG2455|consen 284 SVPTFKHLWKKVGENVDNYRTFPRLVGECGGKNFHFVHASADVESVVSSTVRSAFEYQGQKCSACSRMYVPESLWPQIRE 363 (561)
T ss_pred ccHHHHHHHHHHHhhhhhhhcchhhhccCCCcceEEeccccchHHHHHHHHHHHHhhcccccchhhhcccchhhcHHHHH
Confidence 9999999887765 24567899999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhccccCCC-CCCCCCccccCCHHHHHHHHHHHHHhhhc-CCeEeeCCcccCCCCceeeeEEEEeCCCCCccccc
Q 015031 234 KLVEKAKAWVVGDP-FDPAVRQGPQVDKKQFDRILSYIEHGKRE-GATLLTGGKPIGKKGYYIEPTIFTNVTEDMLIAKN 311 (414)
Q Consensus 234 ~l~~~~~~~~~g~~-~~~~~~~gpl~~~~~~~~~~~~i~~a~~~-ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~ 311 (414)
.|.+.-+++++|+| .|.++.+||+|..+.+.|++++|+.|+.. ..++++||+.+++.|+|+.|||+...+|..++|.|
T Consensus 364 ~l~~~~~q~~igd~~~d~~~f~gavIh~~sF~rl~k~le~ak~~~~leiL~GGk~DdS~G~FV~PTiv~~kdP~~pim~e 443 (561)
T KOG2455|consen 364 ELVEEHSQLKIGDPVIDFSTFIGAVIHDKSFARLKKVLEHAKKDPELEILAGGKCDDSTGYFVEPTIVLSKDPKDPIMTE 443 (561)
T ss_pred HHHHHHhhcccCCccccccchhhhhccHHHHHHHHHHHHhhccCccceeeecCcccCCCCeeecceEEEccCCCcchhhh
Confidence 99999999999997 78899999999999999999999999863 46899999999999999999999999999999999
Q ss_pred ccccceEEEeeeCC--HHHHHHHH-hcCCCCceEEEecCCHHHHHHHHhccc--eeEEEECCcCC--CCCCCCccCCCCC
Q 015031 312 EIFGPVMALMKFKT--VEEAIKSA-NNTRYGLAAGIMTKDLNVANTVSRSIR--AGIIWINCYFA--FDSDCPYGGYKMS 384 (414)
Q Consensus 312 E~fgPvl~v~~~~~--~~eai~~~-n~~~~gl~~sv~s~d~~~~~~~~~~l~--~g~v~vN~~~~--~~~~~pfgG~~~s 384 (414)
|+|||||+|+.|+| ++|+++++ |.++|+|+.+||+.|.+.+++..++|+ +|+.+||+..+ .....||||.+.|
T Consensus 444 e~fGPvLsVyvY~Dd~~~E~l~lv~~tt~YaLTGaiFaqd~~vv~~a~~~Lr~aAgNfYiNdKcTGsvvgqqpFGGaR~S 523 (561)
T KOG2455|consen 444 EIFGPVLSVYVYEDDKFDEVLKLVDNTTPYALTGAIFAQDREVVLHALDVLRMAAGNFYINDKCTGSVVGQQPFGGARLS 523 (561)
T ss_pred hccCceeEEEEeccccHHHHHHHHhcCCcceeccccccccHHHHHHHHHHHHhhhcceEEccccccceeeccccCccccc
Confidence 99999999999976 89999998 568999999999999999999999997 79999999766 4467899999999
Q ss_pred CCC-CcchHHHHHhhhcccEEE
Q 015031 385 GFG-RDCGLESLHNYLQVKSVV 405 (414)
Q Consensus 385 G~g-~~~g~~~~~~~~~~k~i~ 405 (414)
|+. ..||++.+.+|+.+++|-
T Consensus 524 GTNDKaGgp~~l~RwtSp~~ik 545 (561)
T KOG2455|consen 524 GTNDKAGGPHYLLRWTSPLSIK 545 (561)
T ss_pred CCCCCCCCceEEEeecCcchhh
Confidence 997 588999999999998773
|
|
| >TIGR01092 P5CS delta l-pyrroline-5-carboxylate synthetase | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.5e-64 Score=527.21 Aligned_cols=352 Identities=18% Similarity=0.199 Sum_probs=297.6
Q ss_pred CHHHHHHHHHhHHHHHHHHHHHcCCChHHHhhc---------------cHHHHHHHHHHHHHhhhhhcCceecc---ccC
Q 015031 1 MLKFADLIEEHAEVLAVLEALDAGKLHSWAKMG---------------DIPGAANTLRYYAGAADKIHGEVLKM---SRA 62 (414)
Q Consensus 1 L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~~~~~---------------ev~~~~~~l~~~~~~~~~~~~~~~~~---~~~ 62 (414)
|+++++.|++|+++|+ .++||++.++... |+..+++.+++++. ..+..+...+. ..+
T Consensus 314 L~~la~~l~~~~eei~----~e~gkdl~~a~~~~~~~~~~~el~~~~~ei~~~~~~l~~~a~-~~~~~g~~~~~~~~~~~ 388 (715)
T TIGR01092 314 LHDIADALEDNEDEIL----AENKKDVAAAQGAGYAASLVARLSMSPSKISSLAISLRQLAA-MEDPIGRVLKRTRIADN 388 (715)
T ss_pred HHHHHHHHHHHHHHHH----HHHhhhHHHHHhcCcchhHHHHHhCCHHHHHHHHHHHHHHhc-CCCcccccccccccCCC
Confidence 6789999999999997 4777777654221 46777888888877 33322332211 113
Q ss_pred ccccccccCCcEEEEEcCCCcChHhhHHHHHHHHhcCCeEEEecCCCChhHHHHHHHHHHHcCCCCC----eEEEEcCCc
Q 015031 63 LQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDG----VLNVVPGFG 138 (414)
Q Consensus 63 ~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~~~~ALaaGN~vv~kps~~~~~~~~~l~~~~~~aglp~g----~v~~~~~~~ 138 (414)
...+.+++|+|||++|+||| |+.. ++++++||++||+||+|||+.+|.++..+.+++.++ +|+| +++++++ +
T Consensus 389 ~~~~~~~~P~GVV~~I~PwN-P~~~-~~~~~~ALaaGN~vvlKpse~tp~t~~~l~~l~~~a-lp~g~~~~~~~~v~~-~ 464 (715)
T TIGR01092 389 LILEKTSVPIGVLLIVFESR-PDAL-VQIASLAIRSGNGLLLKGGKEAARSNAILHKVITEA-IPIHVGKKLIGLVTS-R 464 (715)
T ss_pred ceeEEEEeeceEEEEEeCCC-hHHH-HHHHHHHHHhCCEEEEcCcccchHHHHHHHHHHHHH-cCCCCCCcEEEEeCC-h
Confidence 33467899999999999999 9999 589999999999999999999999999999999999 9987 6899985 5
Q ss_pred hhHHHHHHhCCCcCeEEEeCCHHHHHHHHHHHhhCCCCceeeeCCCCCceeecCCCCHHHHHHHHHHHHhcccCCccccC
Q 015031 139 PTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVAS 218 (414)
Q Consensus 139 ~~~~~~l~~~~~~~~v~~tGs~~~~~~i~~~~~~~~~~~~~~e~gG~~~~iV~~dadl~~a~~~i~~~~~~~~Gq~C~a~ 218 (414)
.+.+..|..|+.+|+|+||||+.+|+.|++.++ +|+++|+|||||+||++|||++.|++.++.++| ++||.|+++
T Consensus 465 ~~~~~~l~~~~~vd~I~fTGS~~vG~~i~~~A~----~pv~lElgGk~p~iV~~dADl~~A~~~i~~~~~-~~GQ~C~a~ 539 (715)
T TIGR01092 465 EEIPDLLKLDDVIDLVIPRGSNKLVSQIKKSTK----IPVLGHADGICHVYVDKSASVDMAKRIVRDAKC-DYPAACNAM 539 (715)
T ss_pred HHHHHHHhcCCCccEEEEcCCHHHHHHHHHhCC----CCEEEEcCCcceEEECCCCCHHHHHHHHHHHhC-CCCCccccC
Confidence 677888999999999999999999999988752 999999999999999999999999866666665 559999999
Q ss_pred cEEEEeCccHHHHHHHHHHHHhccccCCCCCCCCCccccCCHHHHHHHHHHHHHhhhcCCeEeeCCcccCCCCceeeeEE
Q 015031 219 SRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIGKKGYYIEPTI 298 (414)
Q Consensus 219 ~~v~V~~~~~~~f~~~l~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~~~g~~~~Ptv 298 (414)
+|||||++++|+ | .+.+++++++++|++++ ||... . .|+.
T Consensus 540 ~rvlV~~~i~d~-------------------------~--------~~~~~v~~~~~~Ga~l~-Gg~~~--~-~~~~--- 579 (715)
T TIGR01092 540 ETLLVHKDLLRN-------------------------G--------LLDDLIDMLRTEGVTIH-GGPRF--A-AYLT--- 579 (715)
T ss_pred cEEEEehhhccc-------------------------h--------hHHHHHHHHHHCCCEEE-CCcch--h-heec---
Confidence 999999999985 0 25677788888899985 77543 1 2432
Q ss_pred EEeCCCCCcccccccccceEEEeeeCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHHhccceeEEEECCcCCCCCCCCc
Q 015031 299 FTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSIRAGIIWINCYFAFDSDCPY 378 (414)
Q Consensus 299 l~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~sv~s~d~~~~~~~~~~l~~g~v~vN~~~~~~~~~pf 378 (414)
..+++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.+.++++++++++|.|+||++....+.+||
T Consensus 580 --~~~~~~~i~~eE~FGPvl~v~~~~~~deAi~~~N~~~~gLa~~ift~d~~~a~~~~~~i~sG~V~vN~~~~~~~~~pf 657 (715)
T TIGR01092 580 --FNISETKSFRTEYSSLACTVEIVDDVYDAIDHIHKHGSAHTDCIVTEDENVAEFFLQHVDSAAVFHNASTRFSDGFRF 657 (715)
T ss_pred --cCCCCchhhhccccCceEEEEEECCHHHHHHHHHcCCCCCeEEEEeCCHHHHHHHHHhCCeeEEEEeCCCCCCCCCCC
Confidence 135689999999999999999999999999999999999999999999999999999999999999988666677899
Q ss_pred cCCCCCCCCC----cchHHHHHhhhcccEEEEeC
Q 015031 379 GGYKMSGFGR----DCGLESLHNYLQVKSVVTPI 408 (414)
Q Consensus 379 gG~~~sG~g~----~~g~~~~~~~~~~k~i~~~~ 408 (414)
||.|.||+|+ .+|++++++|++.|++.+..
T Consensus 658 GG~k~SG~g~~~~~~~g~~~l~~~~~~k~v~~g~ 691 (715)
T TIGR01092 658 GLGAEVGISTSRIHARGPVGVEGLLTTRWLLRGK 691 (715)
T ss_pred cCccccccccCCCCCCChhHHHHhceEEEEEECC
Confidence 9999999995 47999999999999997754
|
This protein contains a glutamate 5-kinase (ProB, EC 2.7.2.11) region followed by a gamma-glutamyl phosphate reductase (ProA, EC 1.2.1.41) region. |
| >KOG2452 consensus Formyltetrahydrofolate dehydrogenase [Nucleotide transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-63 Score=470.21 Aligned_cols=386 Identities=43% Similarity=0.792 Sum_probs=357.3
Q ss_pred CHHHHHHHHHhHHHHHHHHHHHcCCChHHHhhccHHHHHHHHHHHHHhhhhhcCceeccc----cCccccccccCCcEEE
Q 015031 1 MLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMS----RALQGYTLREPIGVVG 76 (414)
Q Consensus 1 L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~----~~~~~~~~~~P~Gvv~ 76 (414)
|.++++++++|+++|+.+.++|.|....-+...-+.-.++..||++.|.+++++..+|.. .......+++|+|||+
T Consensus 489 ~y~la~lme~h~eelat~e~ldagavytlalkthvgmsi~~~ryfagwcdkiqg~tipi~~arpn~nl~lt~~epigv~g 568 (881)
T KOG2452|consen 489 MYRLADLMEQHQEELATIEALDAGAVYTLALKTHVGMSIQTFRYFAGWCDKIQGSTIPINQARPNRNLTLTRKEPVGVCG 568 (881)
T ss_pred hhhccchhhhccchhhhhhhccccceeeeeehhhcCceehHHHHhhhhhhhccCceeccccCCCCCcceeeecCcceeEE
Confidence 468999999999999999999999665544455677889999999999999999888764 3445678999999999
Q ss_pred EEcCCCcChHhhHHHHHHHHhcCCeEEEecCCCChhHHHHHHHHHHHcCCCCCeEEEEcCCchhHHHHHHhCCCcCeEEE
Q 015031 77 HIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSF 156 (414)
Q Consensus 77 ~i~p~n~P~~~~~~~~~~ALaaGN~vv~kps~~~~~~~~~l~~~~~~aglp~g~v~~~~~~~~~~~~~l~~~~~~~~v~~ 156 (414)
+|.|||||+..+.|+.+.+|++- ..++.+ -.|++|+++|+++-+++.|..||+++.|-|
T Consensus 569 ~i~pwnyplmmlswk~aaclaa~-----------------~~k~~e----~sgvini~~gsgslvg~rls~hpdvrkigf 627 (881)
T KOG2452|consen 569 IIIPWNYPLMMLSWKTAACLAAQ-----------------VLKFAE----LTGVVNVLPGSGSLVGQRLSDHPDVRKIGF 627 (881)
T ss_pred EeccCCchHHHHHHHHHHHHHHH-----------------Hhhhhh----hcceEEEecCCcchhccccccCCccceecc
Confidence 99999999999999999988642 112221 247899999999999999999999999999
Q ss_pred eCCHHHHHHHHHHHhhCCCCceeeeCCCCCceeecCCCCHHHHHHHHHHHHhcccCCccccCcEEEEeCccHHHHHHHHH
Q 015031 157 TGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLV 236 (414)
Q Consensus 157 tGs~~~~~~i~~~~~~~~~~~~~~e~gG~~~~iV~~dadl~~a~~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f~~~l~ 236 (414)
|||++.|+.+++.|+....+.+.+|+||++|+|++.|||++.|++.-..+.|++-|..|.+..|+||.+++.|+|+.+++
T Consensus 628 tgsteig~~im~sca~snikkvslelgg~sp~iifad~dl~kav~~~~~~vff~kgenciaagr~fi~~sihd~fv~~~v 707 (881)
T KOG2452|consen 628 TGSTEVGKHIMKSCAISNVKKVSLELGGESPFIIFADCDLNKAVQMGMSSVFFSKGENCIAAGRLFVEDSIHDEFVRRVV 707 (881)
T ss_pred ccchHHHHHHHHHHhhcchheeeeeccCCCceEEEecCcHHHHHHhhccceeecCCcchhhhcceeehhhhhHHHHHHHH
Confidence 99999999999999977789999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhccccCCCCCCCCCccccCCHHHHHHHHHHHHHhhhcCCeEeeCCcccCCCCceeeeEEEEeCCCCCcccccccccc
Q 015031 237 EKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIGKKGYYIEPTIFTNVTEDMLIAKNEIFGP 316 (414)
Q Consensus 237 ~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgP 316 (414)
+.++++++|+|+|.+++-||.....+..++-+|.+.+++.|+++.|||++.+..|.|++|||+.+++..|-+..||.|||
T Consensus 708 ee~~~~~ig~pldr~t~hgpqnh~ahl~kl~ey~~~~v~~ga~~~~gg~~~~r~g~~f~pti~s~i~d~~f~a~eesfgp 787 (881)
T KOG2452|consen 708 EEVRKMKVGNPLDRDTDHGPQNHHAHLVKLMEYCQHGVKEGATLVCGGNQVPRPGFFFEPTVFTDVEDHMFIAKEESFGP 787 (881)
T ss_pred HHHHhhccCCcccccccCCchhHHHHHHHHHHHHHHHhccCcEEEECCccCCCCCcccCCeeecccchhhhhhhccccCc
Confidence 99999999999999999999999999999999999999999999999999988999999999999999999999999999
Q ss_pred eEEEeeeCC--HHHHHHHHhcCCCCceEEEecCCHHHHHHHHhccceeEEEECCcCCCCCCCCccCCCCCCCCCcchHHH
Q 015031 317 VMALMKFKT--VEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSIRAGIIWINCYFAFDSDCPYGGYKMSGFGRDCGLES 394 (414)
Q Consensus 317 vl~v~~~~~--~~eai~~~n~~~~gl~~sv~s~d~~~~~~~~~~l~~g~v~vN~~~~~~~~~pfgG~~~sG~g~~~g~~~ 394 (414)
|+.|.+|+| +|++++.+|++++||+++|||+|...+.++++.|.+|+|+||...--+...||||+|+||+|...|..+
T Consensus 788 im~is~f~d~d~~~vl~ran~tefgla~gvftrd~~k~l~v~~~l~agtvfvnty~ktdvaapfggfkqsgfgkd~ge~a 867 (881)
T KOG2452|consen 788 VMIISRFADGDLDAVLSRANATEFGLASGVFTRDINKALYVSDKLQAGTVFVNTYNKTDVAAPFGGFKQSGFGKDLGEAA 867 (881)
T ss_pred eEEEEecCCCCHHHHHhhccccccccccceeecccchhhhhhhhhccceEEEeeccccccccCCCCccccccccchhHHH
Confidence 999999975 899999999999999999999999999999999999999999887667789999999999999999999
Q ss_pred HHhhhcccEEEEe
Q 015031 395 LHNYLQVKSVVTP 407 (414)
Q Consensus 395 ~~~~~~~k~i~~~ 407 (414)
+.+|++.|+|+..
T Consensus 868 lneyl~~ktit~e 880 (881)
T KOG2452|consen 868 LNEYLRVKTVTFE 880 (881)
T ss_pred HhhheeeEEEEee
Confidence 9999999999864
|
|
| >KOG2453 consensus Aldehyde dehydrogenase [Energy production and conversion] | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.7e-63 Score=447.80 Aligned_cols=406 Identities=26% Similarity=0.468 Sum_probs=375.1
Q ss_pred HHHHHHHHHhHHHHHHHHHHHcCCChHHHhhccHHHHHHHHHHHHHhhhhhcCceeccc-cCccccccccCCcEEEEEcC
Q 015031 2 LKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMS-RALQGYTLREPIGVVGHIIP 80 (414)
Q Consensus 2 ~~~a~~l~~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~-~~~~~~~~~~P~Gvv~~i~p 80 (414)
+++.|.|+...+-|.+++++|+||-..| -.+|++.-++.+.|....-+.+.+..+|.. ++.-....|.|+|+|.+|+.
T Consensus 84 rqigdalr~klq~lg~lvslemgkilae-gvgevqeyvdicdyavglsr~l~g~i~pserpghalleqwnplg~vgvita 162 (507)
T KOG2453|consen 84 RQIGDALRTKLQNLGKLVSLEMGKILAE-GVGEVQEYVDICDYAVGLSRSLEGKIFPSERPGHALLEQWNPLGVVGVITA 162 (507)
T ss_pred HHHHHHHHHHHHHHhhhhhhhhhhHhhh-cchhHHHHHHHHHHhhhhhhhhCCcccCCCCCchhHHHhcCCcceEEEEEe
Confidence 6789999999999999999999999996 578999999999999888888877777654 56666778999999999999
Q ss_pred CCcChHhhHHHHHHHHhcCCeEEEecCCCChhHHHHH----HHHHHHcCCCCCeEEEEcCCchhHHHHHHhCCCcCeEEE
Q 015031 81 WNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYF----AHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSF 156 (414)
Q Consensus 81 ~n~P~~~~~~~~~~ALaaGN~vv~kps~~~~~~~~~l----~~~~~~aglp~g~v~~~~~~~~~~~~~l~~~~~~~~v~~ 156 (414)
+|||....-|.-..|+.+||+|+|||.+.+|+++..+ .+.|.+-.+|.+.....+| +.+.++++..+.+++.+.|
T Consensus 163 fnfpcavygwnnaiaMv~gncVvWKpApttpLtTiAvtklIaevL~qnnl~~aicsltcG-~aDigrAaakdgRvnlvsf 241 (507)
T KOG2453|consen 163 FNFPCAVYGWNNAIAMVCGNCVVWKPAPTTPLTTIAVTKLIAEVLEQNNLPGAICSLTCG-GADIGRAAAKDGRVNLVSF 241 (507)
T ss_pred ccCCceeeccCchhhhhhcceeEecCCCCcceeHHHHHHHHHHHHhccCCCcceeeeccc-chhhhhhccccCceeeccc
Confidence 9999999999999999999999999999999877654 4556666899999999998 6789999999999999999
Q ss_pred eCCHHHHHHHHHHHhhCCCCceeeeCCCCCceeecCCCCHHHHHHHHHHHHhcccCCccccCcEEEEeCccHHHHHHHHH
Q 015031 157 TGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLV 236 (414)
Q Consensus 157 tGs~~~~~~i~~~~~~~~~~~~~~e~gG~~~~iV~~dadl~~a~~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f~~~l~ 236 (414)
|||++.++.+.+... .+..+..+|+||+|+.||.+|||+..++...++++...+||+|+..+|++||+++||+.+++|+
T Consensus 242 tGssQvgKsvgq~vq-arfgk~llelggnnaiiv~edadl~lvvps~lfaavgtagqrctt~rrl~~hesvyd~vlerlk 320 (507)
T KOG2453|consen 242 TGSSQVGKSVGQQVQ-ARFGKLLLELGGNNAIIVNEDADLNLVVPSTLFAAVGTAGQRCTTTRRLIVHESVYDQVLERLK 320 (507)
T ss_pred ccchhhhhHHHHHHH-HHhhhHHHhhcCCceEEEeccccceeeehHHHHHHhcccccchhhhhHHHhhHHHHHHHHHHHH
Confidence 999999999988766 4556789999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhccccCCCCCCCCCccccCCHHHHHHHHHHHHHhhhcCCeEeeCCcccCCCCceeeeEEEEeCCCCCcccccccccc
Q 015031 237 EKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIGKKGYYIEPTIFTNVTEDMLIAKNEIFGP 316 (414)
Q Consensus 237 ~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgP 316 (414)
...+++++|.|+|+.+.+||+.++.+....+..++.+++.|.++.+||+..+.+|+|++|||++ +..|.++..+|.|.|
T Consensus 321 kayaq~~ignpld~ntl~gplht~qav~~f~~~veeak~~ggki~yggkv~er~gnfveptivt-l~hda~vv~~etfap 399 (507)
T KOG2453|consen 321 KAYAQFEIGNPLDSNTLIGPLHTQQAVGKFKASVEEAKASGGKIEYGGKVLERDGNFVEPTIVT-LKHDAPVVLRETFAP 399 (507)
T ss_pred HHHHheecCCcCCCCceeccccCHHHHHHHHHHHHHHHhcCCeEEECCEeeccCCCcccceEEE-ecCCcchhhhhhccc
Confidence 9999999999999999999999999999999999999999999999999998899999999997 899999999999999
Q ss_pred eEEEeeeCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHHhcc--ceeEEEECCcCC-CCCCCCccCCCCCCCCCcchHH
Q 015031 317 VMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSI--RAGIIWINCYFA-FDSDCPYGGYKMSGFGRDCGLE 393 (414)
Q Consensus 317 vl~v~~~~~~~eai~~~n~~~~gl~~sv~s~d~~~~~~~~~~l--~~g~v~vN~~~~-~~~~~pfgG~~~sG~g~~~g~~ 393 (414)
|++|.+|.+++||+.+-|+.+.||+.||||+|...+-++..-. ++|.|.||-++. ...+-.|||.|.+|.|++.|.+
T Consensus 400 ilyvlkf~~~eea~ainnev~qglsssift~n~~nifrw~gpkgsdcgivnvniptsgaeiggafggek~tgggresgsd 479 (507)
T KOG2453|consen 400 ILYVLKFSTLEEAIAINNEVDQGLSSSIFTTNIQNIFRWMGPKGSDCGIVNVNIPTSGAEIGGAFGGEKETGGGRESGSD 479 (507)
T ss_pred eeeEEeccchhhhheeccccccccchhhhhcCHHHHHhhhCCCCCccceEEecCCCCchhhcccccCccccCCCcccCch
Confidence 9999999999999999999999999999999999999988655 689999999875 4467789999999999999999
Q ss_pred HHHhhhcccEEEEeCCCC
Q 015031 394 SLHNYLQVKSVVTPIFNS 411 (414)
Q Consensus 394 ~~~~~~~~k~i~~~~~~~ 411 (414)
++++|+|+.+++++..++
T Consensus 480 swkqymrrstctinyske 497 (507)
T KOG2453|consen 480 SWKQYMRRSTCTINYSKE 497 (507)
T ss_pred HHHHHHhhceeeeecccc
Confidence 999999999999987654
|
|
| >cd07080 ALDH_Acyl-CoA-Red_LuxC Acyl-CoA reductase LuxC | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.3e-33 Score=276.16 Aligned_cols=277 Identities=16% Similarity=0.196 Sum_probs=211.5
Q ss_pred CccccccccCCcEEEEEcCCCcChHhhHHHHHHHHhcCCeEEEecCCCChhHHHHHHHHHHHcCCCC----CeEEEE--c
Q 015031 62 ALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPD----GVLNVV--P 135 (414)
Q Consensus 62 ~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~~~~ALaaGN~vv~kps~~~~~~~~~l~~~~~~aglp~----g~v~~~--~ 135 (414)
+...+++++|+||+++|+|||||+ ..++.+++||++||++|+|||+.+|.++..+.++|.++ +|+ +.++++ +
T Consensus 103 ~~~~~~~~~P~Gvv~~I~p~N~P~-l~~~s~~~aLlaGN~~ilKpS~~~p~~~~~l~~~l~~~-~p~~~~~~~~~vv~~~ 180 (422)
T cd07080 103 GRGGYIRAQPRGLVVHIIAGNVPL-LPVWSIVRGLLVKNVNLLKMSSSDPLTATALLRSLADV-DPNHPLTDSISVVYWP 180 (422)
T ss_pred CCCCeeEEcCCceEEEEccCCccc-cHHHHHHHHHHhcCceEEECCCccchHHHHHHHHHHhc-CCCCcccceEEEEEec
Confidence 456678899999999999999999 78899999999999999999999999999999999999 787 888888 4
Q ss_pred CCchhHHHHHHhCCCcCeEEEeCCHHHHHHHHHHHhhCCCCceeeeCCCCCc-eeecCCC----CHHHHHHHHHHHHhcc
Q 015031 136 GFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSP-LLIFDDV----DVNTAADMALLGILFN 210 (414)
Q Consensus 136 ~~~~~~~~~l~~~~~~~~v~~tGs~~~~~~i~~~~~~~~~~~~~~e~gG~~~-~iV~~da----dl~~a~~~i~~~~~~~ 210 (414)
|.+.+.++.|..++ |.|+||||+++++.|.+.++ .+ +..+|+|||++ +|+++++ |++.+++.+++++|.+
T Consensus 181 g~~~~~~~~l~~~~--D~i~~~Gs~~~~~~i~~~a~-~~--~~~Le~Ggk~s~~vi~~~a~~~~dl~~aa~~~a~~~~~~ 255 (422)
T cd07080 181 GGDAELEERILASA--DAVVAWGGEEAVKAIRSLLP-PG--CRLIDFGPKYSFAVIDREALESEKLAEVADALAEDICRY 255 (422)
T ss_pred CCchHHHHHHHHhC--CEEEEeCCHHHHHHHHHhCC-CC--CeeeecCCceeEEEecHHhhccccHHHHHHHHHHHHHHH
Confidence 65556888888887 99999999999999999876 43 56999999955 5556668 9999999999999999
Q ss_pred cCCccccCcEEEEeCcc---HHHHHHHHHHHHhccccCCCCCCCCCccccCCHHHHHHHHHHHHHhhhcCCeEeeCCccc
Q 015031 211 KGEICVASSRVYVQEGI---YDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPI 287 (414)
Q Consensus 211 ~Gq~C~a~~~v~V~~~~---~~~f~~~l~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ga~v~~gg~~~ 287 (414)
+||.|.|+++||||+++ +++|.++|.++++++.-..|. +++ +.....++...-..+...+.+... .
T Consensus 256 ~gQ~C~sp~~v~V~~~~~~~~~~f~~~l~~~l~~~~~~~p~------~~~-~~~~~~~~~~~r~~~~~~~~~~~~----~ 324 (422)
T cd07080 256 DQQACSSPQVVFVEKDDDEELREFAEALAAALERLPRRYPA------LSL-SAAESAKIARARLEAEFYELKGGV----S 324 (422)
T ss_pred hhhhccCCeEEEEECCCCchHHHHHHHHHHHHHHHHHhCCC------CCC-CHHHHHHHHHHHHHHHHHHHhcCC----C
Confidence 99999999999999999 999999999999987543332 111 233333333222222222212111 1
Q ss_pred CCCCceeeeEEEEeCCCCCcccccccccceEEEeeeCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHHhccc-eeEEEE
Q 015031 288 GKKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSIR-AGIIWI 366 (414)
Q Consensus 288 ~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~sv~s~d~~~~~~~~~~l~-~g~v~v 366 (414)
.+.++ +|+...+.. +. ....+-.+.|+++++++|++..++. +-.|+++|..+.+. .++++++. .|.-.|
T Consensus 325 ~~~~~----~v~~~~~~~--~~-~~~~~r~v~v~~v~~l~~~l~~~~~--~lQTvg~~~~~~~~-~~~~~~l~~~Gv~Ri 394 (422)
T cd07080 325 RDLGW----TVIISDEIG--LE-ASPLNRTVNVKPVASLDDVLRPVTP--YLQTVGLAPSPAEL-AELADALAAAGVDRI 394 (422)
T ss_pred CCCCe----EEEEeCCCC--cc-CCCCcCEEEEEEcchHHHHHHhhhh--hcceeEeecChhhH-HHHHHHHHHcCcccc
Confidence 11222 344333222 11 1455568899999999999999985 77899999988777 77777775 454444
|
Acyl-CoA reductase, LuxC, (EC=1.2.1.50) is the fatty acid reductase enzyme responsible for synthesis of the aldehyde substrate for the luminescent reaction catalyzed by luciferase. The fatty acid reductase, a luminescence-specific, multienzyme complex (LuxCDE), reduces myristic acid to generate the long chain fatty aldehyde required for the luciferase-catalyzed reaction resulting in the emission of blue-green light. Mutational studies of conserved cysteines of LuxC revealed that the cysteine which aligns with the catalytic cysteine conserved throughout the ALDH superfamily is the LuxC acylation site. This CD is composed of mainly bacterial sequences but also includes a few archaeal sequences similar to the Methanospirillum hungateiacyl acyl-CoA reductase RfbN. |
| >COG0014 ProA Gamma-glutamyl phosphate reductase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.97 E-value=7.3e-31 Score=247.74 Aligned_cols=360 Identities=19% Similarity=0.229 Sum_probs=270.7
Q ss_pred CHHHHHHHHHhHHHHHHHHHHHc------CCChHHH-hh----ccHHHHHHHHHHHHHhhhhhcCc--eeccccCccccc
Q 015031 1 MLKFADLIEEHAEVLAVLEALDA------GKLHSWA-KM----GDIPGAANTLRYYAGAADKIHGE--VLKMSRALQGYT 67 (414)
Q Consensus 1 L~~~a~~l~~~~~~l~~~~~~e~------Gk~~~~~-~~----~ev~~~~~~l~~~~~~~~~~~~~--~~~~~~~~~~~~ 67 (414)
|.++++.|++++++|.++..+|. |.+.... +. .-+..+++-++..+...+++... ....+.|-+.+.
T Consensus 31 L~a~A~~L~~~~~~IL~AN~~Dl~~are~gl~~~m~DRL~L~~~Ri~~ma~gl~~Va~L~DPvGev~~~~~~~nGL~i~~ 110 (417)
T COG0014 31 LLAMADALEAARAEILAANAKDLAAARENGLSEAMLDRLALTPSRIEAMADGLRQVAALPDPVGEVIDGWTLPNGLQIYR 110 (417)
T ss_pred HHHHHHHHHHhHHHHHHhhHHHHHHHHHcCCcHHHHHHHcCCHHHHHHHHHHHHHHhcCCCchHhhhccccCCCCCEEEE
Confidence 46788888888888888877764 3322210 00 12344455555555544443221 122346778888
Q ss_pred cccCCcEEEEEcCCCcChHhhHHHHHHHHhcCCeEEEecCCCChhHHHHHHHH----HHHcCCCCCeEEEEcCCchhH-H
Q 015031 68 LREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHL----AKLAGVPDGVLNVVPGFGPTA-G 142 (414)
Q Consensus 68 ~~~P~Gvv~~i~p~n~P~~~~~~~~~~ALaaGN~vv~kps~~~~~~~~~l~~~----~~~aglp~g~v~~~~~~~~~~-~ 142 (414)
.+.|+||+++|.- ..|- ..+....-+|++||+||+|.+..+..+...+.++ |.++|+|++.+|+++..+++. .
T Consensus 111 ~rvPLGVigvIYE-sRPn-VtvdaaaLclKsGNAvILRGGsea~~Sn~ai~~~i~~aL~~~~lP~~aVqli~~~~R~~v~ 188 (417)
T COG0014 111 VRVPLGVIGVIYE-SRPN-VTVDAAALCLKSGNAVILRGGSEAIHSNAAIVEVIQEALEKAGLPADAVQLIEDTDREEVL 188 (417)
T ss_pred EEccceEEEEEEe-cCCc-cHHHHHHHHHhcCCEEEEeCcHHHhhhHHHHHHHHHHHHHHcCCCHHHhhhccCCCHHHHH
Confidence 9999999999965 3343 3445667899999999999999999888887766 567799999999998865554 4
Q ss_pred HHHHhCCCcCeEEEeCCHHHHHHHHHHHhhCCCCceeeeCCCCCceeecCCCCHHHHHHHHHHHHhcccCCccccCcEEE
Q 015031 143 AAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVY 222 (414)
Q Consensus 143 ~~l~~~~~~~~v~~tGs~~~~~~i~~~~~~~~~~~~~~e~gG~~~~iV~~dadl~~a~~~i~~~~~~~~Gq~C~a~~~v~ 222 (414)
+.|....-+|.|+-.||..--+.+.+.+ ..||+-.+-|++.++|+.+||++.|.+-++.+++...+ .|++.+.++
T Consensus 189 ~ll~l~~yiD~iIPRGg~~Li~~v~~~a----~vPVi~~~~G~CHiyvd~~ADld~A~~ii~nAKtqrPs-~CNA~EtLL 263 (417)
T COG0014 189 ELLRLDGYIDLVIPRGGAGLIRRVVENA----TVPVIEHGVGNCHIYVDESADLDKALKIIVNAKTQRPS-VCNAAETLL 263 (417)
T ss_pred HHHhhcCceeEEEcCCcHHHHHHHHhCC----cCCEEecCcceEEEEecccCCHHHHHHHHHcccCCCCc-ccchHHHHH
Confidence 5555555699999999999888776654 48999999999999999999999999999999988776 899999999
Q ss_pred EeCccHHHHHHHHHHHHhccccCCCCCCCCCccccCCHHHHHHHHHHHHHhhhcCCeEeeCCcccCCCCceeeeEEEEeC
Q 015031 223 VQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIGKKGYYIEPTIFTNV 302 (414)
Q Consensus 223 V~~~~~~~f~~~l~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~~~g~~~~Ptvl~~~ 302 (414)
||+.+.++|+..|.+.+....+.--- +... .+++.+ .+ .
T Consensus 264 Vh~~ia~~fLp~l~~~l~~~gvelr~----------d~~~----~~~~~~-----------------~~----------~ 302 (417)
T COG0014 264 VHRAIAKSFLPKLANALQEAGVELRG----------DAEA----LALLPD-----------------AV----------K 302 (417)
T ss_pred cCHHHHHHhHHHHHHHHHhcCeEEEc----------CHHH----HHhccc-----------------cC----------C
Confidence 99999999999999988753221000 1111 111110 00 1
Q ss_pred CCCCcccccccccceEEEeeeCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHHhccceeEEEECCcCCCCCCCCccCCC
Q 015031 303 TEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSIRAGIIWINCYFAFDSDCPYGGYK 382 (414)
Q Consensus 303 ~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~sv~s~d~~~~~~~~~~l~~g~v~vN~~~~~~~~~pfgG~~ 382 (414)
+....-+..|...+++.|-.++++|+||+.+|..+.+|+-+|.|+|.+.+++|.+.+++..|+||..+.|..+.-||=-.
T Consensus 303 ~A~e~Dw~tEyLd~ilavkvVd~ld~AI~HIn~y~S~HsdaIiTe~~~~a~~F~~~VDSAaVyvNASTRFtDG~~fG~Ga 382 (417)
T COG0014 303 PATEEDWDTEYLDLILAVKVVDSLDEAIAHINTYGSGHSDAIITEDYANAERFVNEVDSAAVYVNASTRFTDGGQFGLGA 382 (417)
T ss_pred CCchhhHHHHhhhheeEEEEeCCHHHHHHHHHHhCCCCCcceeeCCHHHHHHHHhhcchheEEEecccccccCccccCce
Confidence 11112246899999999999999999999999999999999999999999999999999999999999888777775323
Q ss_pred CCCC----CCcchHHHHHhhhcccEEEEeC
Q 015031 383 MSGF----GRDCGLESLHNYLQVKSVVTPI 408 (414)
Q Consensus 383 ~sG~----g~~~g~~~~~~~~~~k~i~~~~ 408 (414)
+-|. ....|+.|++.+|..|++....
T Consensus 383 EiGISTqKlHARGPmGLe~LTs~Kyiv~G~ 412 (417)
T COG0014 383 EIGISTQKLHARGPMGLEALTSYKYIVRGD 412 (417)
T ss_pred EEEeecCcccCCCCCChhhhcceeEEEeCC
Confidence 3333 3456999999999999987643
|
|
| >KOG4165 consensus Gamma-glutamyl phosphate reductase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.89 E-value=5.3e-22 Score=181.65 Aligned_cols=356 Identities=20% Similarity=0.219 Sum_probs=255.2
Q ss_pred CHHHHHHHHHhHHHHHHHHHH------HcCCChHHHhh-----ccHHHHHHHHHHHHHhhhhhcCcee---ccccCcccc
Q 015031 1 MLKFADLIEEHAEVLAVLEAL------DAGKLHSWAKM-----GDIPGAANTLRYYAGAADKIHGEVL---KMSRALQGY 66 (414)
Q Consensus 1 L~~~a~~l~~~~~~l~~~~~~------e~Gk~~~~~~~-----~ev~~~~~~l~~~~~~~~~~~~~~~---~~~~~~~~~ 66 (414)
|+++++.|..+..++.++... ++|....-... ..+.....-++..+. +....+..+ ....+-.-+
T Consensus 28 l~~iad~L~~~~~~I~~aN~~Dla~Ake~GL~~sll~RL~l~~~K~~sl~~g~~~ia~-~edpvGRVl~~~~ladgL~L~ 106 (433)
T KOG4165|consen 28 LHHIADLLVDNEKEILAANKKDLAEAKEAGLAESLLKRLDLSPGKISSLAAGLRQIAE-LEDPVGRVLKKTRLADGLELE 106 (433)
T ss_pred HHHHHHHHHhhHHHHHhcchhhHHHHHhcCccHHHHHHhcCChHHHHHHHHHHHHHHh-cccchhhheeeeeccCCceEE
Confidence 467888888877777665544 45532221111 122333333343333 222223222 123455556
Q ss_pred ccccCCcEEEEEcCCCcChHhhHHHHHHHHhcCCeEEEecCCCChhHHHHHHHHHHHc----CCCCCeEEEEcCCchhHH
Q 015031 67 TLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLA----GVPDGVLNVVPGFGPTAG 142 (414)
Q Consensus 67 ~~~~P~Gvv~~i~p~n~P~~~~~~~~~~ALaaGN~vv~kps~~~~~~~~~l~~~~~~a----glp~g~v~~~~~~~~~~~ 142 (414)
....|+||.++|-- .---.+..-..-|++.||.+++|....+..+...|.++..++ |.|.+.++++.. .+++.
T Consensus 107 qvt~PiGvLLVIFE--SRPd~l~qiasLAi~SgN~llLKGGkEa~~Sn~~L~~~v~~al~~~~~~~~aV~LV~s-REev~ 183 (433)
T KOG4165|consen 107 QVTVPIGVLLVIFE--SRPDCLPQIASLAIASGNGLLLKGGKEAAHSNAALHKLVQEALGTHGGPGKAVQLVTS-REEVS 183 (433)
T ss_pred EeeccceEEEEEec--cCchHHHHHHHHHHhcCCeEeecCchhhhhhHHHHHHHHHHHhhhccCchhhhhheec-HHHHH
Confidence 67789999999843 222233334566899999999999999988888887776655 778999999987 66788
Q ss_pred HHHHhCCCcCeEEEeCCHHHHHHHHHHHhhCCCCceeeeCCCCCceeecCCCCHHHHHHHHHHHHhcccCCccccCcEEE
Q 015031 143 AAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVY 222 (414)
Q Consensus 143 ~~l~~~~~~~~v~~tGs~~~~~~i~~~~~~~~~~~~~~e~gG~~~~iV~~dadl~~a~~~i~~~~~~~~Gq~C~a~~~v~ 222 (414)
+.|..+..+|.|+-.||..-.+.|.... ..||.....|.+.++|++|||++.|.+-+..+++-+. -.|++.+.++
T Consensus 184 dLl~ld~~IDLvIPRGSs~LVr~Ik~~t----kIPVLGHA~GichvYvd~dad~~kA~riv~DaK~dYP-AaCNAmETLL 258 (433)
T KOG4165|consen 184 DLLKLDDYIDLVIPRGSSDLVRSIKDTT----KIPVLGHAEGICHVYVDKDADLDKAKRIVRDAKCDYP-AACNAMETLL 258 (433)
T ss_pred HHhhhhhheeEEecCCcHHHHHHHhhcc----cCcccccccceeEEEeccccCHHHHHHHHhcccCCCc-hhhhhHHHHh
Confidence 8888888899999999999988886652 3899999999999999999999999888777776554 5899999999
Q ss_pred EeCcc-HHHHHHHHHHHHhccccCCCCCCCCCccccCCHHHHHHHHHHHHHhhhcCCeEeeCCcccCCCCceeeeEEEEe
Q 015031 223 VQEGI-YDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIGKKGYYIEPTIFTN 301 (414)
Q Consensus 223 V~~~~-~~~f~~~l~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~~~g~~~~Ptvl~~ 301 (414)
+|++. ...|.+.|...+.. +|-++.+|.+.. .-..|
T Consensus 259 Ih~dl~~~~~~~~l~~~l~~----------------------------------~gVtl~agpkl~-~~l~~-------- 295 (433)
T KOG4165|consen 259 IHKDLEQSPFFDDLINMLKE----------------------------------EGVTLHAGPKLA-ALLKF-------- 295 (433)
T ss_pred ccHhhhhcchHHHHHHHHHh----------------------------------cCeEEecChhHH-hhcCc--------
Confidence 99984 34555555544432 122222222111 01111
Q ss_pred CCCCCcccccccccceEEEeeeCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHHhccceeEEEECCcCCCCCCCCccCC
Q 015031 302 VTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSIRAGIIWINCYFAFDSDCPYGGY 381 (414)
Q Consensus 302 ~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~sv~s~d~~~~~~~~~~l~~g~v~vN~~~~~~~~~pfgG~ 381 (414)
-++...-++.|.-.-.+++-.+++.++||+.+|..+.+++-+|.|+|.+.+++|.+.+++..|+.|..+.|..++-||=-
T Consensus 296 ~p~e~~s~~~Ey~~l~~~ievV~~v~~Ai~HI~~hgS~HTD~IvTe~~~~Ae~Fl~~VDSa~vf~NASTRFaDGfRfGlG 375 (433)
T KOG4165|consen 296 SPPEAKSFNTEYGSLECTIEVVDSVQSAIDHIHTHGSSHTDCIVTENEATAEHFLKHVDSACVFHNASTRFADGFRFGLG 375 (433)
T ss_pred CCchhhhhhhhhcchheeeeecccHHHHHHHHHhcCCcccceEEecCHHHHHHHHhccchhheeeccccccccccccccc
Confidence 13334446788777888999999999999999999999999999999999999999999999999999999999888743
Q ss_pred CCCCC--CC--cchHHHHHhhhcccEEEEeC
Q 015031 382 KMSGF--GR--DCGLESLHNYLQVKSVVTPI 408 (414)
Q Consensus 382 ~~sG~--g~--~~g~~~~~~~~~~k~i~~~~ 408 (414)
-+-|. ++ ..|+-|++-.+..|++.+..
T Consensus 376 aEVGIST~rIHARGPvGveGLlttkw~lRG~ 406 (433)
T KOG4165|consen 376 AEVGISTSRIHARGPVGVEGLLTTKWLLRGK 406 (433)
T ss_pred ceeeeeccceeccCCccccceeeeeeEEecC
Confidence 34444 33 45899999999999987643
|
|
| >PF05893 LuxC: Acyl-CoA reductase (LuxC); InterPro: IPR008670 This family consists of several bacterial Acyl-CoA reductase (LuxC) proteins | Back alignment and domain information |
|---|
Probab=99.81 E-value=1.8e-16 Score=156.84 Aligned_cols=277 Identities=19% Similarity=0.189 Sum_probs=196.7
Q ss_pred ccccccCCcEEEEEcCCCcChHhhHHHHHHHHhcCCeEEEecCCCChhHHHHHHHHHHHcCCCC----CeEEEE--cCCc
Q 015031 65 GYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPD----GVLNVV--PGFG 138 (414)
Q Consensus 65 ~~~~~~P~Gvv~~i~p~n~P~~~~~~~~~~ALaaGN~vv~kps~~~~~~~~~l~~~~~~aglp~----g~v~~~--~~~~ 138 (414)
.+.++.|+|++++|.|.|-|+..+.. ++.+|.+||..|+|+|+..+.++..|.+.|.+. .|. ..+.++ ++.+
T Consensus 81 ~~~~~~p~g~v~Hi~agNvp~~~~~S-~~~~lL~gn~nivK~ss~d~~~~~~l~~~l~~~-~~~~~l~~~i~v~~~~~~d 158 (399)
T PF05893_consen 81 GYVRAFPRGLVFHIAAGNVPLVGFYS-LVRGLLSGNANIVKLSSRDPFLAPALLRSLAEI-DPEHPLADSIAVVYWPGGD 158 (399)
T ss_pred chhhccCCceEEEEcCCCccchHHHH-HHHHHHhCCceEEECCCCchhHHHHHHHHHHhh-CccchhhhcEEEEEecCCc
Confidence 67889999999999999999987765 677888999999999999999999999999887 554 455666 4545
Q ss_pred hhHHHHHHhCCCcCeEEEeCCHHHHHHHHHHHhhCCCCceeeeCCCCCceeecCCCCHHHHHHHHHHHHhcccCCccccC
Q 015031 139 PTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVAS 218 (414)
Q Consensus 139 ~~~~~~l~~~~~~~~v~~tGs~~~~~~i~~~~~~~~~~~~~~e~gG~~~~iV~~dadl~~a~~~i~~~~~~~~Gq~C~a~ 218 (414)
.++.+.+. ...|.++.+||.++.+.+.+.+ +..++.+....-.+.+++..+++++.+++.++.-.+...+|.|.||
T Consensus 159 ~~~~~~~~--~~~D~vv~wGgd~ti~~ir~~~--~~~~~~i~fg~k~S~avi~~~~~~~~~a~~~a~Di~~~dQ~aCsSp 234 (399)
T PF05893_consen 159 EELEEALS--QQADAVVAWGGDETIRAIRQPL--PPGARLIEFGPKYSFAVIDAEAELEEAARRLANDIFLFDQQACSSP 234 (399)
T ss_pred hHHHHHHH--HHCCEEEEeCCHHHHHHHHHHc--CCCCcEeeeCCceEEEEEcCchhHHHHHHHHHHHHHHhhCcccCCC
Confidence 56677776 4489999999999999999843 5667788888888888999999999999999999999999999999
Q ss_pred cEEEEeC---ccHHHHHHHHHHHHhccccCCCCCCCCCccccCCHHHHHHHHHHHH-----HhhhcCCeEeeCCcccCCC
Q 015031 219 SRVYVQE---GIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIE-----HGKREGATLLTGGKPIGKK 290 (414)
Q Consensus 219 ~~v~V~~---~~~~~f~~~l~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~-----~a~~~ga~v~~gg~~~~~~ 290 (414)
+.|||.. .-.++|.++|.+.+.+..---|... .+......+....+ .+...+.++..+...
T Consensus 235 ~~ifv~~g~~~~~~~f~~~L~~~L~~~~~~~p~~~-------~s~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~---- 303 (399)
T PF05893_consen 235 QVIFVETGDGDSVEEFAERLAEALERAAERYPRGE-------LSIDEAAAISSLRAEAELRYALDGEYRVWSSDDN---- 303 (399)
T ss_pred eEEEEECCCcccHHHHHHHHHHHHHHHHHhCCCcC-------CCHHHHHHHHHHHHHHHHHHHhcCCcceeecCCC----
Confidence 9999993 3367888888777765321112110 12222222222222 233333344422211
Q ss_pred CceeeeEEEEeCCCCCcccccccccceEEEeeeCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHHhcc-ceeEEEE
Q 015031 291 GYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSI-RAGIIWI 366 (414)
Q Consensus 291 g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~sv~s~d~~~~~~~~~~l-~~g~v~v 366 (414)
.-||+....+ . ......+-.+.|+++++.+|++..++....-.|++++... +...++++.+ ..|.-.|
T Consensus 304 ----~~~V~~~~~~--~-~~~~pl~r~v~v~~v~~~~e~~~~l~~~~~lQTvgi~~~~-~~~~~~~~~l~~~Gv~Ri 372 (399)
T PF05893_consen 304 ----SWTVIVSPEP--P-LLPSPLNRTVYVVPVDSLEELVPYLRPKRGLQTVGIYPWS-ERLEELARALAAAGVDRI 372 (399)
T ss_pred ----CEEEEECCCc--c-cccCCCCCEEEEEEcCCHHHHHHHhhhcCCCeeEEEecCh-hhHHHHHHHHHhcCCeee
Confidence 1245543221 1 2233446689999999999999999876323588887544 5566666644 4564444
|
The channelling of fatty acids into the fatty aldehyde substrate for the bacterial bioluminescence reaction is catalysed by a fatty acid reductase multienzyme complex, which channels fatty acids through the thioesterase (LuxD), synthetase (LuxE) and reductase (LuxC) components [].; GO: 0003995 acyl-CoA dehydrogenase activity, 0008218 bioluminescence, 0055114 oxidation-reduction process |
| >KOG2449 consensus Methylmalonate semialdehyde dehydrogenase [Amino acid transport and metabolism; Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.53 E-value=2.1e-14 Score=115.94 Aligned_cols=146 Identities=28% Similarity=0.374 Sum_probs=116.6
Q ss_pred HHHHHHHHHHHHhccccCCCCCCCCCccccCCHHHHHHHHHHHHHhhh-cCCeEeeCCcccCCCCceeeeEEEEeCCCCC
Q 015031 228 YDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKR-EGATLLTGGKPIGKKGYYIEPTIFTNVTEDM 306 (414)
Q Consensus 228 ~~~f~~~l~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~-~ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~ 306 (414)
.....+.|++..+.+++-+...+.+|. ....+++.++++.-.- .|..+..-|- .+|+|..||+|. +.|+|
T Consensus 8 aksW~~~lve~ak~l~v~~g~kp~tD~-----~a~~~ri~~liqS~~~~~~r~~yl~~y---a~~~f~~~tiLs-vtP~m 78 (157)
T KOG2449|consen 8 AKSWHPTLVEDAKVLKVNAGEKPQTDK-----YAPKVRIDKLIQSEDPLDGRFIYLPGY---AEGNFVGPTILS-VTPNM 78 (157)
T ss_pred hhhhhHHHHHhhhheEeccCCCCCccc-----hhHHHHHHHHhcCcCccCCceEEeecc---ccCCcccceEEE-ecCCc
Confidence 345667788888888887777777776 5667788888865211 1222222221 489999999997 99999
Q ss_pred cccccccccceEEEeeeCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHHhccceeEEEECCcC-CCCCCCCccCCC
Q 015031 307 LIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSIRAGIIWINCYF-AFDSDCPYGGYK 382 (414)
Q Consensus 307 ~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~sv~s~d~~~~~~~~~~l~~g~v~vN~~~-~~~~~~pfgG~~ 382 (414)
.++.||+||||+....-++++|+|.++|+++||....|||.+.+.++++....++|.+.+|.+- ...++..|.|-+
T Consensus 79 s~ykeeI~gpVlv~l~~~tldd~I~Iin~nPygn~t~i~Tsn~atark~~~e~~a~qig~~~~ip~ilk~~sfsg~~ 155 (157)
T KOG2449|consen 79 SCYKEEIFGPVLVRLETETLDDAIFIINNNPYGNGTAIFTSNGATARKFCHEPDAGQIGANVPIPVILKMFSFSGDR 155 (157)
T ss_pred ceeHhhhhcceEEEEeecCCCceeEEEecCCCCceeEEEecCcHHhhhhhcCCCccceeccccccccccceeccccC
Confidence 9999999999999999999999999999999999999999999999999999999999999863 334555565543
|
|
| >PF07368 DUF1487: Protein of unknown function (DUF1487); InterPro: IPR009961 This family consists of several uncharacterised proteins from Drosophila melanogaster | Back alignment and domain information |
|---|
Probab=99.31 E-value=5.1e-11 Score=105.69 Aligned_cols=165 Identities=21% Similarity=0.239 Sum_probs=126.0
Q ss_pred CceeecCCCCHHHHHHHHHHHHhcccCCccccCcEEEEeCccHHHHHHHHHHHHhccccCCCCCCCCCccccCCHHHHHH
Q 015031 186 SPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDR 265 (414)
Q Consensus 186 ~~~iV~~dadl~~a~~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f~~~l~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~ 265 (414)
.-+||++|.|++.|+..++.+.-. --...+...|+|||++.|+|+++++.+++.+. +. +.+...+.+
T Consensus 6 ~lMIvfe~GDlnsA~~~L~~sl~~--Pf~~~~VatVlVqEsireefi~rvr~~m~pl~------~~-----va~Hpny~r 72 (215)
T PF07368_consen 6 QLMIVFEDGDLNSAMHYLLESLHN--PFAPGAVATVLVQESIREEFIERVRSRMKPLS------PQ-----VANHPNYLR 72 (215)
T ss_pred eEEEEEeCCCHHHHHHHHHHHHhC--cccCCcEEEEEEeHHHHHHHHHHHHHhCccCC------hh-----hccCcHHHH
Confidence 347999999999999999998643 33456788999999999999999999887652 21 234445666
Q ss_pred HHHHHHHhhhcCCeEeeCCcccCCCCceeeeEEEEeCCCCCcccccccccceEEEeeeCCHHHHHHHHhcC-CCCceEEE
Q 015031 266 ILSYIEHGKREGATLLTGGKPIGKKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNT-RYGLAAGI 344 (414)
Q Consensus 266 ~~~~i~~a~~~ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~-~~gl~~sv 344 (414)
..+.++. -+++.+.+.... .-..-.|.++.+.+... +.. -..+|+++..|++..||+++++.. ...-++||
T Consensus 73 sl~~i~~---l~~~~I~~~~~~--~~~~aSPilV~d~~h~~--fg~-~PTgViTlhtFRt~~Ea~~l~~kE~l~f~SVsi 144 (215)
T PF07368_consen 73 SLKKIKC---LNAKTIVADFEN--VPPPASPILVCDFTHSY--FGD-GPTGVITLHTFRTPKEAIELCAKETLPFDSVSI 144 (215)
T ss_pred HHHHHHh---cCCeEEEecccC--CCCCCCCEEEcCCCHHH--cCC-CCCeEEEEEccCCHHHHHHHHhcCCCCcceEEE
Confidence 5555544 577888874321 12233699998776542 222 455899999999999999999864 33359999
Q ss_pred ecCCHHHHHHHHhccceeEEEECCcCC
Q 015031 345 MTKDLNVANTVSRSIRAGIIWINCYFA 371 (414)
Q Consensus 345 ~s~d~~~~~~~~~~l~~g~v~vN~~~~ 371 (414)
|++..+.+.+++.+|++..++|||...
T Consensus 145 W~ekla~~Yel~~~l~~~~f~iNC~~V 171 (215)
T PF07368_consen 145 WNEKLASAYELAARLPCDTFYINCFNV 171 (215)
T ss_pred eCcHHHHHHHHHHhCCCCEEEEEeccC
Confidence 999999999999999999999999864
|
The function of this family is unknown. |
| >PRK11905 bifunctional proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=98.72 E-value=8e-08 Score=107.02 Aligned_cols=111 Identities=18% Similarity=0.126 Sum_probs=87.7
Q ss_pred eeccccCccccccccCCcEEEEEcCCCcChHhhHHHHHHHHhcCCeEEEecCCCChhHHHHHHHHHHHcCCCCCeEEEEc
Q 015031 56 VLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVP 135 (414)
Q Consensus 56 ~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~~~~ALaaGN~vv~kps~~~~~~~~~l~~~~~~aglp~g~v~~~~ 135 (414)
.+|.++|+.+..+..|+|++++++||| ..++.++..||++||+||+||++.++. . .+.+|..+.+.+
T Consensus 1063 ~LPGPTGEsN~L~l~~RG~vlcisp~~---~~~l~Qi~AALaaGn~vi~~~~~~~~~-------~--~~~Lp~~~~~~~- 1129 (1208)
T PRK11905 1063 ELPGPTGESNLLSLHPRGRVLCVADTE---EALLRQLAAALATGNVAVVAADSGLAA-------A--LADLPGLVAARI- 1129 (1208)
T ss_pred cCCCCCCcceeEEecCCceEEEECCcH---HHHHHHHHHHHHhCCEEEEeCCcccHH-------H--HHhCcccccccc-
Confidence 567789999999999999999999999 557789999999999999999998652 1 122565555544
Q ss_pred CCchhHHHHHHhCCCcCeEEEeCCHHHHHHHHHHHhhCCC--CceeeeCC
Q 015031 136 GFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNL--KPVSLELG 183 (414)
Q Consensus 136 ~~~~~~~~~l~~~~~~~~v~~tGs~~~~~~i~~~~~~~~~--~~~~~e~g 183 (414)
..+..+..+++++.|.|+|+.++.+.+.+.++++.+ .|++.|..
T Consensus 1130 ----~~~~~~~~~~~i~~V~~~G~~~~a~~i~~~LA~R~G~Ivpliaet~ 1175 (1208)
T PRK11905 1130 ----DWTQDWEADDPFAGALLEGDAERARAVRQALAARPGAIVPLIAAEP 1175 (1208)
T ss_pred ----ccccccccCCcccEEEEeCCHHHHHHHHHHHHhCCCCcceEEecCC
Confidence 234467777889999999999999999999885654 45555553
|
|
| >PF00815 Histidinol_dh: Histidinol dehydrogenase; InterPro: IPR012131 Histidinol dehydrogenase (HDH) catalyzes the terminal step in the biosynthesis of histidine in bacteria, fungi, and plants, the four-electron oxidation of L-histidinol to histidine | Back alignment and domain information |
|---|
Probab=97.95 E-value=0.0047 Score=60.96 Aligned_cols=261 Identities=24% Similarity=0.259 Sum_probs=124.7
Q ss_pred cCccccccccCCcEEEEEcCC---CcChHhhHHHHHHHHhcCCeEE--EecCCCChhHHHHHHHHHHHcCCCCCeEEEEc
Q 015031 61 RALQGYTLREPIGVVGHIIPW---NFPTTMFFMKVSPALAAGCTMI--VKPAEQTPLIALYFAHLAKLAGVPDGVLNVVP 135 (414)
Q Consensus 61 ~~~~~~~~~~P~Gvv~~i~p~---n~P~~~~~~~~~~ALaaGN~vv--~kps~~~~~~~~~l~~~~~~aglp~g~v~~~~ 135 (414)
.|.....++.|+--|++..|. -||-..+| .++||-.+|..=| .-|+...-.....+......+|..+ +--+
T Consensus 96 ~G~~~g~~~~Pi~rvG~YVPGG~a~~pStvlM-~aiPA~vAGV~~Iv~~TPp~~~G~i~p~vL~Aa~~~Gv~e--vy~v- 171 (412)
T PF00815_consen 96 PGVILGQRYRPIERVGLYVPGGRAPYPSTVLM-TAIPAKVAGVKEIVVCTPPPKDGKINPAVLAAAHLAGVDE--VYKV- 171 (412)
T ss_dssp TTEEEEEEEEE-SEEEEE---SSS--THHHHH-HHHHHHHHT-SEEEEEE-SS------HHHHHHHHHTT-SE--EEE--
T ss_pred CCcEEEEEEEEhhheEEEccCCCCCccHHHHH-cccchhhcCCCeEEEEcCCCccCCCCHHHHHHHHHcCCCE--EEec-
Confidence 566677889999999999994 34544444 5789999987654 4454442233344555666777743 2222
Q ss_pred CCchhHHHHHHh----CCCcCeEEEeCCHHHHHHHHHHHhhCCCCceeeeCCCCCc--eeecCCCCHHHHHHHHHHHHhc
Q 015031 136 GFGPTAGAAIAS----HMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSP--LLIFDDVDVNTAADMALLGILF 209 (414)
Q Consensus 136 ~~~~~~~~~l~~----~~~~~~v~~tGs~~~~~~i~~~~~~~~~~~~~~e~gG~~~--~iV~~dadl~~a~~~i~~~~~~ 209 (414)
| |.....+|.- -|.+|.|+=.|..-+...=....+ .-+.- -..|.+= +|-+++||.+..+.+++.-+=+
T Consensus 172 G-GaqAIAAlAyGTeti~~VDkIvGPGN~yV~~AK~~v~g-~V~ID---~~AGPSEv~ViAD~~A~p~~vAaDLLaQAEH 246 (412)
T PF00815_consen 172 G-GAQAIAALAYGTETIPKVDKIVGPGNAYVTAAKRLVFG-DVGID---MIAGPSEVLVIADETANPEFVAADLLAQAEH 246 (412)
T ss_dssp --HHHHHHHHHH--SSS---SEEE---SHHHHHHHHHHHH-S-EES---------EEEEEE-TTS-HHHHHHHHHHHHTT
T ss_pred c-cHHHHHHHHcCCCCCCceeEEECCCcHHHHHHHHHhcC-CcccC---CCCCCCceEEEECCCCCHHHHHHHHHHHhcc
Confidence 2 4333333332 478999999998765442222221 11111 1123222 3446789999999988876655
Q ss_pred ccCCccccCcEEEEeCccHHHHHHHHHHHHhccccCCCCCCCCCccccCCHHHHHHHHHHHHHhhhcCCeEeeCCcccCC
Q 015031 210 NKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIGK 289 (414)
Q Consensus 210 ~~Gq~C~a~~~v~V~~~~~~~f~~~l~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~~ 289 (414)
... .+.++|..+ +++.+++.+.+.+..-.-| .. +.++.+.+
T Consensus 247 d~~-----a~~vLvt~s--~~la~~V~~~v~~~l~~l~-----------r~-------~i~~~sl~-------------- 287 (412)
T PF00815_consen 247 DPD-----AQAVLVTTS--EELAEAVEAEVERQLEELP-----------RR-------EIAEKSLE-------------- 287 (412)
T ss_dssp -TT------EEEEEES---HHHHHHHHHHHHHHHTT-T-----------TH-------HHHHHHHT--------------
T ss_pred CCC-----CceEEEECC--HHHHHHHHHHHHHHHHhCC-----------ch-------HHHHHHHH--------------
Confidence 543 233566555 3444444444443210000 11 11122211
Q ss_pred CCceeeeEEEEeCCCCCcccccccccceEEEeeeCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHHhccc-eeEEEECC
Q 015031 290 KGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSIR-AGIIWINC 368 (414)
Q Consensus 290 ~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~sv~s~d~~~~~~~~~~l~-~g~v~vN~ 368 (414)
+| .++.++|++||++++|..- .=...|.++|+ .++..+++ +|.|++..
T Consensus 288 ------------------------~g---~ii~~~~l~ea~~~~N~~A-PEHLel~~~~~---~~~~~~i~~AGaiFlG~ 336 (412)
T PF00815_consen 288 ------------------------NG---AIIVVDSLEEAIELANEYA-PEHLELQVEDP---EELLEKIRNAGAIFLGE 336 (412)
T ss_dssp ------------------------T----EEEE-SSHHHHHHHHHHH---SEEEEESTTH---HHHGGG--S-SEEEEST
T ss_pred ------------------------CC---eEEEECCHHHHHHHHHHhh-HHHHHHHHcCH---HHHHHHhhccChhhcCC
Confidence 11 4556799999999999742 23567888886 55777776 89999998
Q ss_pred cCC---------CCCCCCccCCCCCCCCCcchHHHHHhhhcccEEE
Q 015031 369 YFA---------FDSDCPYGGYKMSGFGRDCGLESLHNYLQVKSVV 405 (414)
Q Consensus 369 ~~~---------~~~~~pfgG~~~sG~g~~~g~~~~~~~~~~k~i~ 405 (414)
+.. .++-+|-+ |.+++.+.-+...|+++.++.
T Consensus 337 ~tp~a~GDY~aGpNHvLPT~-----G~AR~~sgLsv~~FlK~~s~~ 377 (412)
T PF00815_consen 337 YTPEALGDYAAGPNHVLPTG-----GTARFSSGLSVDDFLKRISVQ 377 (412)
T ss_dssp T--HHHHHHTSSS------T-----TGGGT---S-GGGGEEEEEEE
T ss_pred CCCHHHhhhccCCCccCCCC-----ccccccCCCcHHHccceeeEE
Confidence 643 23455654 456677777889999887654
|
In 4-electron dehydrogenases, a single active site catalyses 2 separate oxidation steps: oxidation of the substrate alcohol to an intermediate aldehyde; and oxidation of the aldehyde to the product acid, in this case His []. The reaction proceeds via a tightly- or covalently-bound inter-mediate, and requires the presence of 2 NAD molecules []. By contrast with most dehydrogenases, the substrate is bound before the NAD coenzyme []. A Cys residue has been implicated in the catalytic mechanism of the second oxidative step []. In bacteria HDH is a single chain polypeptide; in fungi it is the C-terminal domain of a multifunctional enzyme which catalyzes three different steps of histidine biosynthesis; and in plants it is expressed as nuclear encoded protein precursor which is exported to the chloroplast [].; GO: 0004399 histidinol dehydrogenase activity, 0008270 zinc ion binding, 0051287 NAD binding, 0000105 histidine biosynthetic process, 0055114 oxidation-reduction process; PDB: 1KAE_B 1K75_A 1KAH_A 1KAR_B. |
| >COG0141 HisD Histidinol dehydrogenase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=97.67 E-value=0.0081 Score=58.89 Aligned_cols=262 Identities=22% Similarity=0.285 Sum_probs=148.6
Q ss_pred ccCccccccccCCcEEEEEcC---CCcChHhhHHHHHHHHhcCCeEE--EecCCCChhHHHHHHHHHHHcCCCCCeEEEE
Q 015031 60 SRALQGYTLREPIGVVGHIIP---WNFPTTMFFMKVSPALAAGCTMI--VKPAEQTPLIALYFAHLAKLAGVPDGVLNVV 134 (414)
Q Consensus 60 ~~~~~~~~~~~P~Gvv~~i~p---~n~P~~~~~~~~~~ALaaGN~vv--~kps~~~~~~~~~l~~~~~~aglp~g~v~~~ 134 (414)
..|.....++.|+--|++..| .-||-..+|. .+||-.+|+.=| ..|++..- ....+.-....+|+.+ +++ +
T Consensus 105 ~~Gv~~g~~~~Pi~~VGlYVPGG~A~ypStvLM~-avPAkvAGv~~Iv~~tPp~~~g-v~p~iL~AA~~~Gv~e-Iy~-v 180 (425)
T COG0141 105 EPGVVLGQRWRPIERVGLYVPGGKAAYPSTVLMN-AVPAKVAGVEEIVVVTPPPKDG-VNPEILAAARLAGVDE-VYK-V 180 (425)
T ss_pred cCCcEEEEEEEEhhheEEEccCCCcCChHHHHHh-hccHhhcCCceEEEECCCCCCC-CCHHHHHHHHHhCcHH-HHH-c
Confidence 357777888999999999999 6677655554 679999998654 44554422 2333333444455432 111 1
Q ss_pred cCCchhHHHHHHhC----CCcCeEEEeCCHHHHHHHHHHHhhCCCCceeeeCCCCCceee-cCCCCHHHHHHHHHHHHhc
Q 015031 135 PGFGPTAGAAIASH----MDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLI-FDDVDVNTAADMALLGILF 209 (414)
Q Consensus 135 ~~~~~~~~~~l~~~----~~~~~v~~tGs~~~~~~i~~~~~~~~~~~~~~e~gG~~~~iV-~~dadl~~a~~~i~~~~~~ 209 (414)
| |.....+|.-. +.+|.|+=.|..-+.. +++.. ....-+=+-.|-..-+|+ ++++|.+..+.+++.-+=+
T Consensus 181 -G-GAQAIAAlAYGTetV~~VdkIvGPGN~yVta--AKr~v-~g~V~ID~~AGPSEvlViAD~ta~p~~vA~DLLsQAEH 255 (425)
T COG0141 181 -G-GAQAIAALAYGTETVPKVDKIVGPGNAYVTA--AKRLV-SGVVGIDMIAGPSEVLVIADETANPDFVAADLLSQAEH 255 (425)
T ss_pred -c-CHHHHHHHHccCCcCCccCeeeCCCcHHHHH--HHHHh-hCCcccCCCCCCceEEEEeCCCCCHHHHHHHHHHHhhc
Confidence 2 33334444444 7799999888876533 22222 111111122233333333 5569999999888766544
Q ss_pred ccCCccccCcEEEEeCccHHHHHHHHHHHHhccccCCCCCCCCCccccCCHHHHHHHHHHHHHhhhcCCeEeeCCcccCC
Q 015031 210 NKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIGK 289 (414)
Q Consensus 210 ~~Gq~C~a~~~v~V~~~~~~~f~~~l~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~~ 289 (414)
+.. .+.|+|..+ ++|.++..+.+.+..-- ..+ .+. +.++..
T Consensus 256 d~~-----a~aiLvT~s--~~la~~v~~~v~~~l~~------------l~~--~ei----~~~~l~-------------- 296 (425)
T COG0141 256 DPD-----AQAILVTDS--EELAEAVEAAVERQLET------------LPR--AEI----ARKALE-------------- 296 (425)
T ss_pred CCC-----ceEEEEeCc--HHHHHHHHHHHHHHHHh------------ccH--HHH----HHHHHH--------------
Confidence 432 344566555 45555555444432100 000 111 111111
Q ss_pred CCceeeeEEEEeCCCCCcccccccccceEEEeeeCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHHhccc-eeEEEECC
Q 015031 290 KGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSIR-AGIIWINC 368 (414)
Q Consensus 290 ~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~sv~s~d~~~~~~~~~~l~-~g~v~vN~ 368 (414)
-+| .|+.++|++||++++|..- .-..-|.++|+ +.++.+++ +|.|+++.
T Consensus 297 -----------------------~~g---~iilv~~l~ea~~~~N~~A-PEHLei~~~~p---~~~l~~I~nAGsIFlG~ 346 (425)
T COG0141 297 -----------------------NYG---AIILVDDLDEAVEISNEYA-PEHLELQTENP---RELLGKIRNAGSIFLGH 346 (425)
T ss_pred -----------------------hCC---eEEEECCHHHHHHHHHhhC-hHhhhhhhcCH---HHHHHHhcccceeeecC
Confidence 111 4556799999999999742 24567888886 44666665 79999998
Q ss_pred cCC---------CCCCCCccCCCCCCCCCcchHHHHHhhhcccEE
Q 015031 369 YFA---------FDSDCPYGGYKMSGFGRDCGLESLHNYLQVKSV 404 (414)
Q Consensus 369 ~~~---------~~~~~pfgG~~~sG~g~~~g~~~~~~~~~~k~i 404 (414)
++. .++-+|- +|+-++.+.-+...|+++.++
T Consensus 347 ~sPe~~GDY~aG~NHVLPT-----~g~AR~~s~L~v~dF~K~~tv 386 (425)
T COG0141 347 YSPESLGDYAAGPNHVLPT-----SGTARFSSGLSVYDFLKRSTV 386 (425)
T ss_pred CCCccccccccCCCccCCC-----CccchhcCCccHHHhhhHHHH
Confidence 643 1233444 455566666777777776543
|
|
| >PLN02926 histidinol dehydrogenase | Back alignment and domain information |
|---|
Probab=97.61 E-value=0.033 Score=55.26 Aligned_cols=261 Identities=23% Similarity=0.249 Sum_probs=146.0
Q ss_pred cCccccccccCCcEEEEEcCCC---cChHhhHHHHHHHHhcCCeEE--EecCCCChhHHHHHHHHHHHcCCCCCeEEEEc
Q 015031 61 RALQGYTLREPIGVVGHIIPWN---FPTTMFFMKVSPALAAGCTMI--VKPAEQTPLIALYFAHLAKLAGVPDGVLNVVP 135 (414)
Q Consensus 61 ~~~~~~~~~~P~Gvv~~i~p~n---~P~~~~~~~~~~ALaaGN~vv--~kps~~~~~~~~~l~~~~~~aglp~g~v~~~~ 135 (414)
.|.....++.|+.-|++..|.- ||-..+| .++||-.+|..=| .-|+...-.....+.-....+|+.+ +..
T Consensus 110 ~Gv~~g~~~~Pi~rvG~YVPGG~a~ypStvLM-~aiPAkvAGV~~Iv~~TPp~~~g~i~p~iL~AA~~~Gv~e----Iy~ 184 (431)
T PLN02926 110 PGVRCRRVARPIGAVGLYVPGGTAVLPSTALM-LAVPAQIAGCKTVVLATPPRKDGSICPEVLYCAKKAGVTH----ILK 184 (431)
T ss_pred CCeEEEEEEechHHeeEeccCCCCCccHHHHH-hhcchhhcCCCeEEEEECCCcCCCCCHHHHHHHHHcCCCe----eec
Confidence 4556678889999999999973 5554444 5789999997654 4454321012223333556677653 221
Q ss_pred CCchhHHHHHH----hCCCcCeEEEeCCHHHHHHHHHHHhhCCCCceeee-CCCCC-ce-eecCCCCHHHHHHHHHHHHh
Q 015031 136 GFGPTAGAAIA----SHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLE-LGGKS-PL-LIFDDVDVNTAADMALLGIL 208 (414)
Q Consensus 136 ~~~~~~~~~l~----~~~~~~~v~~tGs~~~~~~i~~~~~~~~~~~~~~e-~gG~~-~~-iV~~dadl~~a~~~i~~~~~ 208 (414)
-.|.....+|. +-|.+|.|+=.|..-+...=....+ . +.-|-.. ..|.+ -+ |-+++||.+.++.+++.-+=
T Consensus 185 vGGaQAIAAlAyGTetIp~VDkIvGPGN~yV~~AK~~v~G-~-~~~VgID~~AGPSEvlIiAD~tA~p~~vAaDLLaQAE 262 (431)
T PLN02926 185 AGGAQAIAAMAWGTDSCPKVDKIFGPGNQYVTAAKMILQN-S-EAMVSIDMPAGPSEVLVIADKTANPVHVAADLLSQAE 262 (431)
T ss_pred cCCHHHHHHHHcCCCCCCCCCEEECCCcHHHHHHHHHhhC-C-CCccccCCCCCCceeEEEeCCCCCHHHHHHHHHHHhc
Confidence 11333333332 2468999998888765432111111 1 0001111 12322 23 33556899999988886654
Q ss_pred cccCCccccCcEEEEeCc--cHHHHHHHHHHHHhccccCCCCCCCCCccccCCHHHHHHHHHHHHHhhhcCCeEeeCCcc
Q 015031 209 FNKGEICVASSRVYVQEG--IYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKP 286 (414)
Q Consensus 209 ~~~Gq~C~a~~~v~V~~~--~~~~f~~~l~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ga~v~~gg~~ 286 (414)
+... .+.++|..+ +.++..+.+.++++.+. . . +.++.+...
T Consensus 263 Hdp~-----a~aiLvT~s~~la~~V~~~v~~ql~~l~---------------r---~----~i~~~sl~~---------- 305 (431)
T PLN02926 263 HGPD-----SQVVLVAVGDVDLDAIEEEVEKQCQSLP---------------R---G----EIASKALGH---------- 305 (431)
T ss_pred cCCC-----CcEEEEECCHHHHHHHHHHHHHHHHhCC---------------h---H----HHHHHHHHC----------
Confidence 4433 334555444 23444444444444331 0 0 111111111
Q ss_pred cCCCCceeeeEEEEeCCCCCcccccccccceEEEeeeCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHHhccc-eeEEE
Q 015031 287 IGKKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSIR-AGIIW 365 (414)
Q Consensus 287 ~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~sv~s~d~~~~~~~~~~l~-~g~v~ 365 (414)
-.++.++|++||++++|..- .-...|.++|+ ..+..+++ +|.|+
T Consensus 306 -------------------------------g~iivv~~l~ea~~~~N~~A-PEHLei~~~~~---~~~l~~i~nAGaiF 350 (431)
T PLN02926 306 -------------------------------SFIVVARDMAEAISFSNLYA-PEHLIVNVEDA---ESWLDKIDNAGSVF 350 (431)
T ss_pred -------------------------------CEEEEECCHHHHHHHHHhhC-hHhheehhcCH---HHHHhhcCccceec
Confidence 13456799999999999742 23456888886 45666665 89999
Q ss_pred ECCcCC---------CCCCCCccCCCCCCCCCcchHHHHHhhhcccEEE
Q 015031 366 INCYFA---------FDSDCPYGGYKMSGFGRDCGLESLHNYLQVKSVV 405 (414)
Q Consensus 366 vN~~~~---------~~~~~pfgG~~~sG~g~~~g~~~~~~~~~~k~i~ 405 (414)
+..+.. .++-+|- +|.+++.|.-+...|+++.++.
T Consensus 351 lG~~sp~a~GDY~aGpNHvLPT-----~G~AR~~sgLsv~~FlK~~s~~ 394 (431)
T PLN02926 351 LGRWTPESVGDYASGTNHVLPT-----YGYARMYGGVSLDSFLKYMTVQ 394 (431)
T ss_pred cCCCCchhhhccccCcCcccCC-----CcceeecCCCcHHHhcceeeEE
Confidence 976543 1233444 3566777777889998876654
|
|
| >TIGR00069 hisD histidinol dehydrogenase | Back alignment and domain information |
|---|
Probab=97.52 E-value=0.059 Score=52.89 Aligned_cols=259 Identities=22% Similarity=0.247 Sum_probs=147.8
Q ss_pred cCccccccccCCcEEEEEcCCC---cChHhhHHHHHHHHhcCCeEEE--ecCCCChhHHHHHHHHHHHcCCCCCeEEEEc
Q 015031 61 RALQGYTLREPIGVVGHIIPWN---FPTTMFFMKVSPALAAGCTMIV--KPAEQTPLIALYFAHLAKLAGVPDGVLNVVP 135 (414)
Q Consensus 61 ~~~~~~~~~~P~Gvv~~i~p~n---~P~~~~~~~~~~ALaaGN~vv~--kps~~~~~~~~~l~~~~~~aglp~g~v~~~~ 135 (414)
.|.....++.|+--|++..|.- ||-..+| ..+||-.+|..=|+ -|+...-.....+.-....+|..+ +..
T Consensus 78 ~Gv~~g~~~~Pi~rvGlYVPGG~a~~pStvLM-~aiPAkvAGV~~Iv~~TPp~~~g~i~p~iL~AA~~~Gv~e----Iy~ 152 (393)
T TIGR00069 78 PGVILGQRVRPLERVGLYVPGGRAPYPSTVLM-TAIPAKVAGVKEIVVCTPPGKDGKINPAVLAAAKLAGVDE----VYK 152 (393)
T ss_pred CCeEEEEEEEEeheEEEEeCCCCCcchHHHHH-hhcchhhcCCCeEEEEeCCCcCCCCCHHHHHHHHHcCCCe----ehh
Confidence 5666678899999999999973 5544444 57799999976554 444321112233333556677653 221
Q ss_pred CCchhHHHHHH----hCCCcCeEEEeCCHHHHHHHHHHHhhCCCCceeee-CCCCCc--eeecCCCCHHHHHHHHHHHHh
Q 015031 136 GFGPTAGAAIA----SHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLE-LGGKSP--LLIFDDVDVNTAADMALLGIL 208 (414)
Q Consensus 136 ~~~~~~~~~l~----~~~~~~~v~~tGs~~~~~~i~~~~~~~~~~~~~~e-~gG~~~--~iV~~dadl~~a~~~i~~~~~ 208 (414)
-.|.....+|. +-|.+|.|+=.|..-+.. +++.. .. .+-.. ..|.+= +|-+++||.+..+.+++.-+=
T Consensus 153 vGGAQAIAAlAyGTesIp~VDkIvGPGN~yV~~--AK~~v-~g--~V~ID~~AGPSEvlViAD~~Anp~~iAaDLLaQAE 227 (393)
T TIGR00069 153 VGGAQAIAALAYGTETVPKVDKIVGPGNIYVTA--AKKLV-FG--DVGIDMPAGPSEVLVIADETANPEFVAADLLSQAE 227 (393)
T ss_pred cCCHHHHHHHHcCCCCCCCCcEEECCCcHHHHH--HHHHh-cC--ccCcCCCCCCceEEEEeCCCCCHHHHHHHHHHHhc
Confidence 11333333332 347899999888876543 22211 11 11111 122222 334567899999988886654
Q ss_pred cccCCccccCcEEEEeCc--cHHHHHHHHHHHHhccccCCCCCCCCCccccCCHHHHHHHHHHHHHhhhcCCeEeeCCcc
Q 015031 209 FNKGEICVASSRVYVQEG--IYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKP 286 (414)
Q Consensus 209 ~~~Gq~C~a~~~v~V~~~--~~~~f~~~l~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ga~v~~gg~~ 286 (414)
+... .+.++|..+ +.++..+.+.+++..+. +. +.++++..+
T Consensus 228 Hd~~-----a~~iLvT~s~~la~~V~~~v~~ql~~l~------------------r~----~i~~~al~~---------- 270 (393)
T TIGR00069 228 HDPD-----AQAILVTTSEELAEAVQEEIERQLATLP------------------RR----EIARKSLED---------- 270 (393)
T ss_pred cCCC-----CcEEEEECCHHHHHHHHHHHHHHHHhCC------------------hH----HHHHHHHHh----------
Confidence 4332 334555444 34555555555544431 01 122222221
Q ss_pred cCCCCceeeeEEEEeCCCCCcccccccccceEEEeeeCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHHhccc-eeEEE
Q 015031 287 IGKKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSIR-AGIIW 365 (414)
Q Consensus 287 ~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~sv~s~d~~~~~~~~~~l~-~g~v~ 365 (414)
+| .++.++|++||++++|..- .-..-|.++|+ .++..+++ +|.|+
T Consensus 271 ---------------------------~g---~ii~v~~l~ea~~~~N~~A-PEHLel~~~~p---~~~l~~I~nAGaiF 316 (393)
T TIGR00069 271 ---------------------------NG---AIILVDDLEEAIEISNDYA-PEHLELQTKNP---EELLPKIRNAGSIF 316 (393)
T ss_pred ---------------------------CC---EEEEECCHHHHHHHHHhhC-hHhheehhCCH---HHHHhhcCccceec
Confidence 11 3456799999999999742 13456778886 45666665 89999
Q ss_pred ECCcCC---------CCCCCCccCCCCCCCCCcchHHHHHhhhcccEEE
Q 015031 366 INCYFA---------FDSDCPYGGYKMSGFGRDCGLESLHNYLQVKSVV 405 (414)
Q Consensus 366 vN~~~~---------~~~~~pfgG~~~sG~g~~~g~~~~~~~~~~k~i~ 405 (414)
+..++. .++-+|- +|.+++.+.-+...|+++.++.
T Consensus 317 lG~~tp~a~GDY~aG~NHvLPT-----~G~Ar~~sgL~v~~F~K~~s~~ 360 (393)
T TIGR00069 317 LGPYTPEAAGDYAAGPNHVLPT-----GGTARFYSGLSVLDFLKRITVQ 360 (393)
T ss_pred cCCCCchhhhhccCCCCcccCC-----CcceeecCCccHHHhccceeEE
Confidence 987643 1233444 4566777777889998887654
|
This model describes a polypeptide sequence catalyzing the final step in histidine biosynthesis, found sometimes as an independent protein and sometimes as a part of a multifunctional protein. |
| >cd06572 Histidinol_dh Histidinol dehydrogenase, HisD, E | Back alignment and domain information |
|---|
Probab=97.51 E-value=0.075 Score=52.31 Aligned_cols=261 Identities=23% Similarity=0.245 Sum_probs=146.2
Q ss_pred cCccccccccCCcEEEEEcCCC-cChHh-hHHHHHHHHhcCCeEE--EecCCCChhHHHHHHHHHHHcCCCCCeEEEEcC
Q 015031 61 RALQGYTLREPIGVVGHIIPWN-FPTTM-FFMKVSPALAAGCTMI--VKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPG 136 (414)
Q Consensus 61 ~~~~~~~~~~P~Gvv~~i~p~n-~P~~~-~~~~~~~ALaaGN~vv--~kps~~~~~~~~~l~~~~~~aglp~g~v~~~~~ 136 (414)
.|.....++.|+--|++..|.- +|+.+ ++...+||-.+|..=| ..|+...-.....+.-....+|..+ +--+ |
T Consensus 82 ~G~~~g~~~~Pi~~vG~YVPGG~a~ypStvLM~aiPAkvAGV~~Iv~~TPp~~~g~i~p~iL~aa~~~Gv~e--iy~v-G 158 (390)
T cd06572 82 PGVVLGQRYRPIERVGLYVPGGTAPYPSTVLMLAIPAKVAGVKEIVVVTPPRKDGKINPAILAAAKLAGVDE--IYKV-G 158 (390)
T ss_pred CCcEEEEEEEehhEEEEEecCCCCcchHHHHHhhcchhhcCCCeEEEEeCcCCCCCCCHHHHHHHHHcCCcE--Eecc-C
Confidence 5667778899999999998865 44432 3335789999997655 4455332122233333455666643 1112 2
Q ss_pred CchhHHHHHH----hCCCcCeEEEeCCHHHHHHHHHHHhhCCCCceeeeCCCCCc--eeecCCCCHHHHHHHHHHHHhcc
Q 015031 137 FGPTAGAAIA----SHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSP--LLIFDDVDVNTAADMALLGILFN 210 (414)
Q Consensus 137 ~~~~~~~~l~----~~~~~~~v~~tGs~~~~~~i~~~~~~~~~~~~~~e~gG~~~--~iV~~dadl~~a~~~i~~~~~~~ 210 (414)
|.....+|. +.|.+|.|+=.|..-+... +...+.. .- +=-..|.+= +|-+++||.+..+.+++.-+=+.
T Consensus 159 -GaQAIAAlAyGTesi~~VDkIvGPGN~yV~~A--K~~v~g~-V~-ID~~AGPSEvlIiAD~~A~p~~vAaDLLaQAEH~ 233 (390)
T cd06572 159 -GAQAIAALAYGTETIPKVDKIVGPGNIYVTAA--KRLVSGD-VG-IDMPAGPSEVLVIADETANPEFVAADLLSQAEHD 233 (390)
T ss_pred -CHHHHHHHHcCCcCCCCCCEeeCCchHHHHHH--HHHhcCC-cC-ccCCCCCceEEEEeCCCCCHHHHHHHHHhhhccC
Confidence 333333333 3678999988888765432 2211011 10 111122222 33456789999988887655433
Q ss_pred cCCccccCcEEEEeCc--cHHHHHHHHHHHHhccccCCCCCCCCCccccCCHHHHHHHHHHHHHhhhcCCeEeeCCcccC
Q 015031 211 KGEICVASSRVYVQEG--IYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIG 288 (414)
Q Consensus 211 ~Gq~C~a~~~v~V~~~--~~~~f~~~l~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~ 288 (414)
. . .+.++|..+ +.++..+.+.++++.+. .. + .++.+..+
T Consensus 234 ~----~-a~aiLvT~s~~la~~V~~~v~~ql~~l~---------------r~---~----~~~~~~~~------------ 274 (390)
T cd06572 234 P----D-SQAILVTTSEELAEAVEEEVERQLAELP---------------RR---E----IAAKSLLD------------ 274 (390)
T ss_pred C----C-CeEEEEECCHHHHHHHHHHHHHHHHhCC---------------cH---H----HHHHHHHh------------
Confidence 2 2 234555444 23444444444444331 00 0 11111110
Q ss_pred CCCceeeeEEEEeCCCCCcccccccccceEEEeeeCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHHhccc-eeEEEEC
Q 015031 289 KKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSIR-AGIIWIN 367 (414)
Q Consensus 289 ~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~sv~s~d~~~~~~~~~~l~-~g~v~vN 367 (414)
+ -.++.++|++||++++|..- .-..-|.++|+.. +..+++ +|.|++.
T Consensus 275 -------------------------~---g~ii~~~~~~eai~~~N~~A-PEHLel~~~~~~~---~l~~i~nAGsiFlG 322 (390)
T cd06572 275 -------------------------Y---GAIILVDDLEEAIELANEYA-PEHLELQTEDPEE---LLEKIRNAGSIFLG 322 (390)
T ss_pred -------------------------C---CEEEEECCHHHHHHHHHhhc-hhhheeHhcCHHH---HHhhCccceEEeec
Confidence 1 13456799999999999742 2345788888743 666665 8999998
Q ss_pred CcCC---------CCCCCCccCCCCCCCCCcchHHHHHhhhcccEEE
Q 015031 368 CYFA---------FDSDCPYGGYKMSGFGRDCGLESLHNYLQVKSVV 405 (414)
Q Consensus 368 ~~~~---------~~~~~pfgG~~~sG~g~~~g~~~~~~~~~~k~i~ 405 (414)
.+.. .++-+|.+ |.+++.+.-+...|+++.++.
T Consensus 323 ~~tp~a~GDY~aGpNHvLPT~-----G~Ar~~sgL~v~~F~K~~s~~ 364 (390)
T cd06572 323 PYTPEALGDYAAGPNHVLPTG-----GTARFYSGLSVDDFLKRITVQ 364 (390)
T ss_pred CCCchhhhccccCCCCccCCC-----cceeecCCCCHHHheecceeE
Confidence 7643 23445554 456666667888888887654
|
C 1.1.1.23. Histidinol dehydrogenase catalyzes the last two steps in the L-histidine biosynthesis pathway, which is conserved in bacteria, archaea, fungi, and plants. These last two steps are (i) the NAD-dependent oxidation of L-histidinol to L-histidinaldehyde, and (ii) the NAD-dependent oxidation of L-histidinaldehyde to L-histidine. In most fungi and in the unicellular choanoflagellate Monosiga bevicollis, the HisD domain is fused with units that catalyze the second and third biosynthesis steps in this same pathway. |
| >PRK00877 hisD bifunctional histidinal dehydrogenase/ histidinol dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=97.44 E-value=0.083 Score=52.50 Aligned_cols=258 Identities=24% Similarity=0.259 Sum_probs=147.3
Q ss_pred cCccccccccCCcEEEEEcCC---CcChHhhHHHHHHHHhcCCeEE--EecCCCChhHHHHHHHHHHHcCCCCCeEEEEc
Q 015031 61 RALQGYTLREPIGVVGHIIPW---NFPTTMFFMKVSPALAAGCTMI--VKPAEQTPLIALYFAHLAKLAGVPDGVLNVVP 135 (414)
Q Consensus 61 ~~~~~~~~~~P~Gvv~~i~p~---n~P~~~~~~~~~~ALaaGN~vv--~kps~~~~~~~~~l~~~~~~aglp~g~v~~~~ 135 (414)
.|.....++.|+--|++..|. -||-..+| ..+||-.+|..=| .-|+. .-.....+.-+...+|..+ +--+
T Consensus 110 ~Gv~~g~~~~Pi~~vG~YVPGG~a~ypStvLM-~aiPAkvAGV~~Iv~~TPp~-~g~i~p~vL~AA~~~Gv~e--Iy~v- 184 (425)
T PRK00877 110 PGVRLGQRWRPIERVGLYVPGGKAAYPSSVLM-NAIPAKVAGVKEIVMVTPPP-DGEINPAILAAAALAGVDE--VYKV- 184 (425)
T ss_pred CCeEEEEEEEehHHeEEEccCCCCCchHHHHH-hhcchhhcCCCeEEEEeCCC-CCCCCHHHHHHHHHcCCCe--eecc-
Confidence 455667788999999999997 35554444 5789999997654 44543 1122333444556666653 1112
Q ss_pred CCchhHHHHHH----hCCCcCeEEEeCCHHHHHHHHHHHhh-CCCCceeeeCCCCC-cee-ecCCCCHHHHHHHHHHHHh
Q 015031 136 GFGPTAGAAIA----SHMDIDKVSFTGSTDVGRQVMQAAAT-SNLKPVSLELGGKS-PLL-IFDDVDVNTAADMALLGIL 208 (414)
Q Consensus 136 ~~~~~~~~~l~----~~~~~~~v~~tGs~~~~~~i~~~~~~-~~~~~~~~e~gG~~-~~i-V~~dadl~~a~~~i~~~~~ 208 (414)
| |.....+|. +-|.+|.|+=.|..-+.. ++...+ .-+.- -..|.+ -+| -+++||.+..+.+++.-+=
T Consensus 185 G-GAQAIAAlAyGTetIp~VDkIvGPGN~yV~~--AK~~v~g~V~ID---~~AGPSEvlViAD~~Anp~~vAaDLLaQAE 258 (425)
T PRK00877 185 G-GAQAIAALAYGTESIPKVDKIVGPGNIYVTA--AKRLVFGVVGID---MIAGPSEILVIADETADPDFVAADLLSQAE 258 (425)
T ss_pred C-CHHHHHHHHcCCCCCCCCcEEECCCcHHHHH--HHHHHcCCcCcC---CCCCCceeEEEeCCCCCHHHHHHHHHHHhc
Confidence 2 333333332 346799999888876543 222111 11111 112222 233 3556899999988886654
Q ss_pred cccCCccccCcEEEEeCc--cHHHHHHHHHHHHhccccCCCCCCCCCccccCCHHHHHHHHHHHHHhhhcCCeEeeCCcc
Q 015031 209 FNKGEICVASSRVYVQEG--IYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKP 286 (414)
Q Consensus 209 ~~~Gq~C~a~~~v~V~~~--~~~~f~~~l~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ga~v~~gg~~ 286 (414)
+... .+.++|..+ +.++..+.+.+++..+. . . +.++++..+
T Consensus 259 Hd~~-----a~aiLvT~s~~la~~V~~~v~~ql~~l~---------------r---~----~ia~~sl~~---------- 301 (425)
T PRK00877 259 HDPD-----AQSILVTTSEELAEAVAAEVERQLATLP---------------R---A----EIARASLEG---------- 301 (425)
T ss_pred cCCC-----CcEEEEECCHHHHHHHHHHHHHHHHhCC---------------h---H----HHHHHHHHh----------
Confidence 4433 334555444 24444444444444321 0 1 112222211
Q ss_pred cCCCCceeeeEEEEeCCCCCcccccccccceEEEeeeCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHHhccc-eeEEE
Q 015031 287 IGKKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSIR-AGIIW 365 (414)
Q Consensus 287 ~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~sv~s~d~~~~~~~~~~l~-~g~v~ 365 (414)
+| .++-++|+|||++++|..- .=...|.++|+ ..+..+++ +|.|+
T Consensus 302 ---------------------------~g---~iivv~~leeai~~~N~~A-PEHLel~~~~p---~~~l~~I~nAGaiF 347 (425)
T PRK00877 302 ---------------------------QG---AIILVDDLEEAIELSNAYA-PEHLEIQTEDP---RALLDRIRNAGAIF 347 (425)
T ss_pred ---------------------------CC---EEEEECCHHHHHHHHHhhC-hHheeehhCCH---HHHHhhcCccceec
Confidence 12 3456799999999999742 23456888887 44566665 89999
Q ss_pred ECCcCC--C-------CCCCCccCCCCCCCCCcchHHHHHhhhcccEEE
Q 015031 366 INCYFA--F-------DSDCPYGGYKMSGFGRDCGLESLHNYLQVKSVV 405 (414)
Q Consensus 366 vN~~~~--~-------~~~~pfgG~~~sG~g~~~g~~~~~~~~~~k~i~ 405 (414)
+..++. . ++-+|- +|..++.+.-+...|+++.++.
T Consensus 348 lG~~tp~a~GDY~aGpNHvLPT-----~G~AR~~sgLsV~~F~K~~s~~ 391 (425)
T PRK00877 348 LGPYTPESLGDYAAGPNHVLPT-----SGTARFSSGLSVYDFLKRSSVI 391 (425)
T ss_pred cCCCCchhhhhcccCCCcccCC-----CcceeecCCccHHHhccceeEE
Confidence 977643 1 233444 4567777778889999887654
|
|
| >PRK13769 histidinol dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.41 E-value=0.062 Score=52.31 Aligned_cols=250 Identities=19% Similarity=0.168 Sum_probs=139.8
Q ss_pred cCccccccccCCcEEEEEcCCCcChHhhHHHHHHHHhcCCeEEEecCCCChhHHHHHHHHHHHcCCCCCeEEEEcCCchh
Q 015031 61 RALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPT 140 (414)
Q Consensus 61 ~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~~~~ALaaGN~vv~kps~~~~~~~~~l~~~~~~aglp~g~v~~~~~~~~~ 140 (414)
.|.....++.|+-.|++..|.-||-.. +...+||-.+|..=|+--+|-.. ....+.-....+|..+ +--+ | |..
T Consensus 83 ~Gv~~g~~~~Pi~rvG~YVPa~~pStv-LM~~iPAkvAGV~~Iv~~TPp~~-i~p~vL~aa~~~Gv~e--Iy~v-G-GAQ 156 (368)
T PRK13769 83 GGVLRSVFWKPVRRAALYVPARYVSTL-VMLAVPARAAGVEEIYVVTPPRG-VTGELLAVAKELGVKG--VLAI-G-GPH 156 (368)
T ss_pred CCeEEEEEEeeeeeeEEEeccchHHHH-HHhhccHhhcCCCeEEEeCCCCC-CCHHHHHHHHHcCCCe--eecc-c-CHH
Confidence 556667789999999999996555433 34578999999876543333211 2222333556666653 1112 2 333
Q ss_pred HHHHHHhCCCcCeEEEeCCHHHHHHHHHHHhhCCCCceeeeCCCCCceeecCCCCHHHHHHHHHHHHhcccCCccccCcE
Q 015031 141 AGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSR 220 (414)
Q Consensus 141 ~~~~l~~~~~~~~v~~tGs~~~~~~i~~~~~~~~~~~~~~e~gG~~~~iV~~dadl~~a~~~i~~~~~~~~Gq~C~a~~~ 220 (414)
...++...-.+|.|+=.|..-+..+=....+ .-+.- +--|-..-+|+-+++|.+..+.+++.-+=+... .+.
T Consensus 157 AIAa~a~gt~VDkIvGPGN~yV~~AK~~v~g-~V~ID--~~AGPSEvlViAD~a~p~~vAaDLLaQAEH~~~-----a~~ 228 (368)
T PRK13769 157 GLAYAVFHMGVDMVAGPGGLYVQAAKYVLSQ-YVGID--GIEGPTELVVYAEGVPPEVAVRGALAQLEHGPT-----SFA 228 (368)
T ss_pred HHHHHhcCCCcCEEECCCcHHHHHHHHHHhC-CcCCC--CcCCCcceEEEcCCCCHHHHHHHHHHHhhcCCC-----CcE
Confidence 3334444447888888888765432111111 11111 112334445666668888888777755433322 334
Q ss_pred EEEeCccHHHHHHHHHHHHhccccCCCCCCCCCccccCCHHHHHHHHHHHHHhhhcCCeEeeCCcccCCCCceeeeEEEE
Q 015031 221 VYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIGKKGYYIEPTIFT 300 (414)
Q Consensus 221 v~V~~~~~~~f~~~l~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~~~g~~~~Ptvl~ 300 (414)
++|..+ .++.+++.+.+.+. +..+ .| .
T Consensus 229 iLvT~s--~~la~~V~~~v~~~---------------------------~~~~--~~------------~---------- 255 (368)
T PRK13769 229 YLLSTD--AELLKAAEEIYRRE---------------------------RTSS--MG------------P---------- 255 (368)
T ss_pred EEEECC--HHHHHHHHHHHHHH---------------------------HHhc--CC------------C----------
Confidence 555554 35555555544431 0000 00 0
Q ss_pred eCCCCCcccccccccceEEEeeeCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHHhccc-eeEEEECCcCCC-------
Q 015031 301 NVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSIR-AGIIWINCYFAF------- 372 (414)
Q Consensus 301 ~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~sv~s~d~~~~~~~~~~l~-~g~v~vN~~~~~------- 372 (414)
..++-++|+|||++++|..-- -...|.+.+ .+..+++ +|.|+++.+..+
T Consensus 256 -----------------~~iivv~~leeai~~~N~~AP-EHLel~~~~-----~~~~~i~nAGsiFl~~p~a~GDY~aGp 312 (368)
T PRK13769 256 -----------------LEVRKVAGVEEAVRFIDEIAP-EHLEVWGRR-----EVAYRVRNVGAVSVNMPSPYLDYVAGI 312 (368)
T ss_pred -----------------CeEEEECCHHHHHHHHHhhCh-HheEeeCcH-----HHHhhCCccCChhcCCchhhhccccCC
Confidence 246678999999999998421 223444422 2555665 899999664332
Q ss_pred CCCCCccCCCCCCCCCcchHHHHHhhhcccEEE
Q 015031 373 DSDCPYGGYKMSGFGRDCGLESLHNYLQVKSVV 405 (414)
Q Consensus 373 ~~~~pfgG~~~sG~g~~~g~~~~~~~~~~k~i~ 405 (414)
++-+|- +|.+++.|.-+...|+++.++.
T Consensus 313 NHvLPT-----~G~AR~~sgLsv~~FlK~~t~~ 340 (368)
T PRK13769 313 SHVLPT-----GGTARWRGIITPLTFMKPIGVA 340 (368)
T ss_pred CCcCCC-----CcceeccCCCcHHHcccceeEE
Confidence 233444 3566667777888888876654
|
|
| >PRK12447 histidinol dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=97.26 E-value=0.16 Score=50.43 Aligned_cols=260 Identities=17% Similarity=0.143 Sum_probs=146.0
Q ss_pred cCccccccccCCcEEEEEcCC---CcChHhhHHHHHHHHhcCCeEEE--ecCCCChhHHHHHHHHHHHcCCCCCeEEEEc
Q 015031 61 RALQGYTLREPIGVVGHIIPW---NFPTTMFFMKVSPALAAGCTMIV--KPAEQTPLIALYFAHLAKLAGVPDGVLNVVP 135 (414)
Q Consensus 61 ~~~~~~~~~~P~Gvv~~i~p~---n~P~~~~~~~~~~ALaaGN~vv~--kps~~~~~~~~~l~~~~~~aglp~g~v~~~~ 135 (414)
.|.....++.|+--|++..|. -||-..+| ..+||-.+|..=|+ -|+...... ..+.-....+|..+ +..
T Consensus 105 ~Gv~~g~~~~Pl~rvG~YVPGG~a~ypStvLM-~aiPAkvAGV~~Iv~~TPp~~~~i~-p~iL~Aa~~~Gv~e----Iy~ 178 (426)
T PRK12447 105 PGVILGHRNIPVNSVGCYVPGGRYPLVASAHM-SVLTAKVAGVKRVIACTPPFPGEPP-PAIVAAMHLAGADE----IYV 178 (426)
T ss_pred CCeEEEEEEeehheEEEEeCCCCCcchHHHHH-hhcchhhcCCCeEEEEeCCCCCCCC-HHHHHHHHHcCCCe----ehh
Confidence 455667788999999999986 34444444 57899999986554 444321122 22333456666653 221
Q ss_pred CCchhHHHHHH----hCCCcCeEEEeCCHHHHHHHHHHHhhCCCCceeeeCCCCCc-eeecCCCCHHHHHHHHHHHHhcc
Q 015031 136 GFGPTAGAAIA----SHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSP-LLIFDDVDVNTAADMALLGILFN 210 (414)
Q Consensus 136 ~~~~~~~~~l~----~~~~~~~v~~tGs~~~~~~i~~~~~~~~~~~~~~e~gG~~~-~iV~~dadl~~a~~~i~~~~~~~ 210 (414)
-.|.....+|. +-|.+|.|+=.|..-+...=....+ .-+.-. +. |-..- +|-+++||.+..+.+++.-+=+.
T Consensus 179 vGGAQAIAAlAyGTetIp~VDkIvGPGN~yV~~AK~~v~g-~V~ID~-~A-GPSEvlViAD~~Anp~~vAaDLLaQAEHd 255 (426)
T PRK12447 179 LGGVQAVAAMAYGTETIKPVDMLVGPGNAYVAEAKRQLFG-RVGIDL-FA-GPTETLVIADDTADPELVATDLLGQAEHG 255 (426)
T ss_pred cCCHHHHHHHHcCCCCCCCCcEEECCCcHHHHHHHHHhcC-ccCcCC-CC-CCceeEEEeCCCCCHHHHHHHHHHHhccC
Confidence 11333323332 3468999998888765432111111 111111 11 22222 33456789999998888665444
Q ss_pred cCCccccCcEEEEeCc--cHHHHHHHHHHHHhccccCCCCCCCCCccccCCHHHHHHHHHHHHHhhhcCCeEeeCCcccC
Q 015031 211 KGEICVASSRVYVQEG--IYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIG 288 (414)
Q Consensus 211 ~Gq~C~a~~~v~V~~~--~~~~f~~~l~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~ 288 (414)
.. .+.++|..+ +.++..+.+.+++..+. . . +.++.+.++
T Consensus 256 ~~-----a~~iLvT~s~~la~~V~~~v~~ql~~l~---------------r---~----~i~~~sl~~------------ 296 (426)
T PRK12447 256 PN-----SPAVLITTSRKLAEEVLAEIERLLAILP---------------T---A----DVASAAWRD------------ 296 (426)
T ss_pred CC-----CceEEEECCHHHHHHHHHHHHHHHHhCC---------------H---H----HHHHHHHHh------------
Confidence 43 233555444 34445445544444431 0 1 122222221
Q ss_pred CCCceeeeEEEEeCCCCCcccccccccceEEEeeeCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHHhccc-eeEEEEC
Q 015031 289 KKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSIR-AGIIWIN 367 (414)
Q Consensus 289 ~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~sv~s~d~~~~~~~~~~l~-~g~v~vN 367 (414)
+| .++-++|++||++++|..- .=...|.++|+ ..+..+++ +|.|++.
T Consensus 297 -------------------------~g---~ii~v~~l~ea~~~~N~~A-PEHLel~~~~~---~~~l~~i~nAGaiFlG 344 (426)
T PRK12447 297 -------------------------YG---EVILCDDLEEMVAEADRYA-SEHVQVMTEDP---DWFLENMTNYGALFLG 344 (426)
T ss_pred -------------------------CC---EEEEECCHHHHHHHHHhhC-hHheeehhCCH---HHHHhhcCccceeccC
Confidence 11 3456799999999999742 23456888886 45666665 8999997
Q ss_pred CcCC---------CCCCCCccCCCCCCCCCcchHHHHHhhhcccEEE
Q 015031 368 CYFA---------FDSDCPYGGYKMSGFGRDCGLESLHNYLQVKSVV 405 (414)
Q Consensus 368 ~~~~---------~~~~~pfgG~~~sG~g~~~g~~~~~~~~~~k~i~ 405 (414)
.+.. .++-+|- +|.+++.+.-+...|+++.++.
T Consensus 345 ~~sp~a~GDY~aGpNHvLPT-----~G~Ar~~sgLsv~~FlK~~s~~ 386 (426)
T PRK12447 345 ERTNVAYGDKVIGTNHVLPT-----SGAARYTGGLWVGKFLKTVTYQ 386 (426)
T ss_pred CCCchhhhhcccCCCcccCC-----CcceeecCCCcHHHhccceeEE
Confidence 6543 1233444 4566777777888998886654
|
|
| >PRK13770 histidinol dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.21 E-value=0.2 Score=49.63 Aligned_cols=259 Identities=17% Similarity=0.231 Sum_probs=145.9
Q ss_pred cCccccccccCCcEEEEEcCCC---cChHhhHHHHHHHHhcCCeEEE--ecCCCChhHHHHHHHHHHHcCCCCCeEEEEc
Q 015031 61 RALQGYTLREPIGVVGHIIPWN---FPTTMFFMKVSPALAAGCTMIV--KPAEQTPLIALYFAHLAKLAGVPDGVLNVVP 135 (414)
Q Consensus 61 ~~~~~~~~~~P~Gvv~~i~p~n---~P~~~~~~~~~~ALaaGN~vv~--kps~~~~~~~~~l~~~~~~aglp~g~v~~~~ 135 (414)
.|.....++.|+--|++..|.- ||-..+ ...+||-.+|..=|+ -|+.... ....+.-....+|..+ +--+
T Consensus 100 ~gv~~g~~~~Pi~rvGlYVPGG~a~ypStvL-M~aiPAkvAGV~~Iv~~TPp~~~~-i~p~iL~Aa~~~Gv~e--Iy~i- 174 (416)
T PRK13770 100 ESVECYEIYHPLESVGIYVPGGKASYPSTVL-MTATLAQVAGVENIVVVTPPQPNG-VSQEVLAACYITQVNQ--VFQV- 174 (416)
T ss_pred CCcEEEEEEeeeeeeEEEccCCCCCccHHHH-HhhccHhhcCCCeEEEEeCcCCCC-CCHHHHHHHHHcCCCe--eecc-
Confidence 4555667889999999999863 454444 457899999987654 4443211 2223333446666653 1112
Q ss_pred CCchhHHHHHH----hCCCcCeEEEeCCHHHHHHHHHHHhhCCCCceeeeCCCCC-c-eeecCCCCHHHHHHHHHHHHhc
Q 015031 136 GFGPTAGAAIA----SHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKS-P-LLIFDDVDVNTAADMALLGILF 209 (414)
Q Consensus 136 ~~~~~~~~~l~----~~~~~~~v~~tGs~~~~~~i~~~~~~~~~~~~~~e~gG~~-~-~iV~~dadl~~a~~~i~~~~~~ 209 (414)
| |.....+|. +-|.+|.|+=.|..-+...=....+ .-+.- + ..|.+ - +|-+++||.+..+.+++.-+=+
T Consensus 175 G-GAQAIAAlAyGTetIp~VDkIvGPGN~yV~~AK~~v~g-~V~ID--~-~AGPSEvlViAD~~Anp~~iAaDLLaQAEH 249 (416)
T PRK13770 175 G-GAQSIAALTYGTETIPKVDKIVGPGNQFVAYAKKYLFG-QVGID--Q-IAGPTEIALIIDETADLDAIVYDVFAQAEH 249 (416)
T ss_pred C-CHHHHHHHHcCCCCCCCCcEEECCCcHHHHHHHHHhcC-CcCcC--C-CCCCceeEEEecCCCCHHHHHHHHHHHhcc
Confidence 2 333323332 3467999988888765432111111 11111 1 12222 2 3345678999999888865544
Q ss_pred ccCCccccCcEEEEeCc--cHHHHHHHHHHHHhccccCCCCCCCCCccccCCHHHHHHHHHHHHHhhhcCCeEeeCCccc
Q 015031 210 NKGEICVASSRVYVQEG--IYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPI 287 (414)
Q Consensus 210 ~~Gq~C~a~~~v~V~~~--~~~~f~~~l~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ga~v~~gg~~~ 287 (414)
... .+.++|..+ +.++..+.+.+++..+. . . +.++.+.++
T Consensus 250 d~~-----a~~iLvT~s~~la~~V~~ev~~ql~~lp---------------r---~----~i~~~al~~----------- 291 (416)
T PRK13770 250 DEL-----ARTYVISEDAQVLKDLESRIAKALPNVD---------------R---Y----DIVSKSIAN----------- 291 (416)
T ss_pred CCC-----CcEEEEeCCHHHHHHHHHHHHHHHHhCC---------------h---H----HHHHHHHHh-----------
Confidence 432 334555443 34555555555554431 0 0 122222211
Q ss_pred CCCCceeeeEEEEeCCCCCcccccccccceEEEeeeCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHHhccc-eeEEEE
Q 015031 288 GKKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSIR-AGIIWI 366 (414)
Q Consensus 288 ~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~sv~s~d~~~~~~~~~~l~-~g~v~v 366 (414)
+| .++-++|+|||++++|..-- =..-|.++|+ ..+..+++ +|.|++
T Consensus 292 --------------------------~g---~ii~v~~~eeai~~~N~~AP-EHLel~~~~~---~~~l~~i~nAGaiFl 338 (416)
T PRK13770 292 --------------------------QH---YLIHASNFDEACHVMNTIAP-EHASIQTVNP---QPYIEKVKYVGALFI 338 (416)
T ss_pred --------------------------CC---EEEEECCHHHHHHHHHhhCh-HhheehhCCH---HHHHhhCCEeceecc
Confidence 11 34567999999999997421 2456888886 45666676 899999
Q ss_pred CCcCC---------CCCCCCccCCCCCCCCCcchHHHHHhhhcccEEE
Q 015031 367 NCYFA---------FDSDCPYGGYKMSGFGRDCGLESLHNYLQVKSVV 405 (414)
Q Consensus 367 N~~~~---------~~~~~pfgG~~~sG~g~~~g~~~~~~~~~~k~i~ 405 (414)
..+.. .++-+|-| |..++.+.-+...|+++.++.
T Consensus 339 G~~sp~a~GDY~aGpNHvLPT~-----G~AR~~sgLsv~~FlK~~s~~ 381 (416)
T PRK13770 339 GHYSPEVIGDYVAGPSHVLPTN-----RTARFTNGLSVNDFLTRNTVI 381 (416)
T ss_pred CCCCchhhhccccCCCCcCCCC-----cceeccCCCcHHHeecceeeE
Confidence 77643 12344544 456666667888898886654
|
|
| >PRK11809 putA trifunctional transcriptional regulator/proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=97.21 E-value=0.0011 Score=74.71 Aligned_cols=105 Identities=16% Similarity=0.093 Sum_probs=78.3
Q ss_pred eeccccCccccccccCCcEEEEEcCCCcChHhhHHHHHHHHhcCCeEEEecCCCChhHHHHHHHHHHHcCCCCCeEEEEc
Q 015031 56 VLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVP 135 (414)
Q Consensus 56 ~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~~~~ALaaGN~vv~kps~~~~~~~~~l~~~~~~aglp~g~v~~~~ 135 (414)
.+|.++|+.|..+..|+|+|+++++. ...++.++..+|++||.+|+..++.. .. ++ +++|+.+.+.+.
T Consensus 1172 ~LPGPTGE~N~l~l~pRg~vLcl~~~---~~~~~~Ql~Aala~Gn~~v~~~~~~~---~~----~~--~~Lp~~v~~~v~ 1239 (1318)
T PRK11809 1172 LLPGPTGERNTYTLLPRERVLCLADT---EQDALTQLAAVLAVGSQALWPDDALH---RA----LV--AALPAAVQARIQ 1239 (1318)
T ss_pred cCCCCCCCcceeeccCCCcEEEeCCC---HHHHHHHHHHHHHhCCEEEEeCCchh---HH----HH--HhccHHHHhHhh
Confidence 56778999999999999999999883 33678899999999999988654432 11 11 458888777653
Q ss_pred CCchhHHHHHHhCCCcCeEEEeCCHHHHHHHHHHHhhCCCC
Q 015031 136 GFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLK 176 (414)
Q Consensus 136 ~~~~~~~~~l~~~~~~~~v~~tGs~~~~~~i~~~~~~~~~~ 176 (414)
-. .........++.|.|.|..+..+.+.++.+++.+.
T Consensus 1240 ~~----~~~~~~~~~~~avl~~G~~~~l~~~~~~LA~R~Ga 1276 (1318)
T PRK11809 1240 LA----KDWQLADQPFDAVLFHGDSDQLRALCEQVAQRDGP 1276 (1318)
T ss_pred hc----cccccccCCccEEEEeCCHHHHHHHHHHHhcCCCC
Confidence 21 11222335699999999999999999998855553
|
|
| >COG4230 Delta 1-pyrroline-5-carboxylate dehydrogenase [Energy production and conversion] | Back alignment and domain information |
|---|
Probab=93.11 E-value=0.92 Score=46.22 Aligned_cols=109 Identities=17% Similarity=0.178 Sum_probs=74.2
Q ss_pred eeccccCccccccccCCcEEEEEcCCCcChHhhHHHHHHHHhcCCeEEEecCCCChhHHHHHHHHHHHcCCCCCeEEEEc
Q 015031 56 VLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVP 135 (414)
Q Consensus 56 ~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~~~~ALaaGN~vv~kps~~~~~~~~~l~~~~~~aglp~g~v~~~~ 135 (414)
.++.++|+.+.....|+|-|+++.+ +....+.+++.+|++||.+++.+.......... +|..+-..+.
T Consensus 628 ~LpGptGErN~~~l~pr~rvl~~~~---~~~~~~~ql~a~la~G~~~v~~~~~~~aa~~~~---------l~~~v~~~~~ 695 (769)
T COG4230 628 LLPGPTGERNTYTLHPRGRVLCVAG---DEQDLLTQLAAVLAVGNQVVIPEDSGLAALLKD---------LPSAVASRIQ 695 (769)
T ss_pred ecCCCcccceeecccCCccEEEeCC---CHHHHHHHHHHHHhcCCeEEecCcchHHHHHHh---------chhhhhhhee
Confidence 4566789999999999999999877 778888999999999999999766532222111 4443311111
Q ss_pred CCchhHHHHHHhCCCcCeEEEeCCHHHHHHHHHHHhhCCCCceeeeC
Q 015031 136 GFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLEL 182 (414)
Q Consensus 136 ~~~~~~~~~l~~~~~~~~v~~tGs~~~~~~i~~~~~~~~~~~~~~e~ 182 (414)
-.+.. ...-.++.+.|.|..+..+.+.+..+ ....|++.-.
T Consensus 696 ~~~~~-----~~~~~~~~vl~~gd~~~~r~~~~~iA-~~~Gpiv~~~ 736 (769)
T COG4230 696 VAKDW-----TADIPFDAVLFHGDSDRLRALCEAIA-ARDGPIVSVQ 736 (769)
T ss_pred eccch-----hhccceeeEEecCCHHHHHHHHHHHh-cCCCCeEEee
Confidence 11111 22334889999999999898888776 4444544433
|
|
Homologous Structure Templates
Structure Templates Detected by BLAST 
Original result of BLAST against Protein Data Bank
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() | |
| Query | 414 | ||||
| 1bxs_A | 501 | Sheep Liver Class 1 Aldehyde Dehydrogenase With Nad | 1e-123 | ||
| 1bi9_A | 499 | Retinal Dehydrogenase Type Two With Nad Bound Lengt | 1e-118 | ||
| 1o05_A | 500 | Apo Form Of Human Mitochondrial Aldehyde Dehydrogen | 1e-116 | ||
| 1cw3_A | 494 | Human Mitochondrial Aldehyde Dehydrogenase Complexe | 1e-116 | ||
| 1o9j_A | 501 | The X-Ray Crystal Structure Of Eta-Crystallin Lengt | 1e-115 | ||
| 2onn_A | 500 | Arg475gln Mutant Of Human Mitochondrial Aldehyde De | 1e-115 | ||
| 4fr8_A | 500 | Crystal Structure Of Human Aldehyde Dehydrogenase-2 | 1e-115 | ||
| 3n81_A | 500 | T244a Mutant Of Human Mitochondrial Aldehyde Dehydr | 1e-115 | ||
| 1nzw_A | 500 | Cys302ser Mutant Of Human Mitochondrial Aldehyde De | 1e-115 | ||
| 3n80_A | 500 | Human Mitochondrial Aldehyde Dehydrogenase, Apo For | 1e-115 | ||
| 1zum_A | 500 | Human Mitochondrial Aldehyde Dehydrogenase Asian Va | 1e-114 | ||
| 3inl_A | 500 | Human Mitochondrial Aldehyde Dehydrogenase Asian Va | 1e-113 | ||
| 1ag8_A | 499 | Aldehyde Dehydrogenase From Bovine Mitochondria Len | 1e-112 | ||
| 2o2p_A | 517 | Crystal Structure Of The C-Terminal Domain Of Rat 1 | 1e-91 | ||
| 3rhm_A | 517 | Crystal Structure Of The E673q Mutant Of C-Terminal | 2e-91 | ||
| 3rhj_A | 517 | Crystal Structure Of The E673a Mutant Of The C-Term | 7e-91 | ||
| 4gnz_A | 517 | Crystal Structure Of The C707s Mutant Of C-terminal | 2e-90 | ||
| 3rhr_A | 517 | Crystal Structure Of The C707a Mutant Of The C-Term | 2e-90 | ||
| 3rhl_A | 517 | Crystal Structure Of The E673aC707A DOUBLE MUTANT O | 1e-89 | ||
| 4a0m_A | 496 | Crystal Structure Of Betaine Aldehyde Dehydrogenase | 3e-89 | ||
| 4i8p_A | 520 | Crystal Structure Of Aminoaldehyde Dehydrogenase 1a | 9e-87 | ||
| 3iwj_A | 503 | Crystal Structure Of Aminoaldehyde Dehydrogenase 2 | 2e-86 | ||
| 2wme_A | 490 | Crystallographic Structure Of Betaine Aldehyde Dehy | 4e-86 | ||
| 2wox_A | 489 | Betaine Aldehyde Dehydrogenase From Pseudomonas Aer | 5e-86 | ||
| 2xdr_A | 489 | Crystallographic Structure Of Betaine Aldehyde Dehy | 3e-85 | ||
| 3zqa_A | 490 | Crystallographic Structure Of Betaine Aldehyde Dehy | 8e-85 | ||
| 2wme_C | 490 | Crystallographic Structure Of Betaine Aldehyde Dehy | 1e-84 | ||
| 3iwk_A | 503 | Crystal Structure Of Aminoaldehyde Dehydrogenase 1 | 4e-84 | ||
| 4i9b_A | 517 | Structure Of Aminoaldehyde Dehydrogenase 1 From Sol | 1e-81 | ||
| 4i8q_A | 514 | Structure Of The Aminoaldehyde Dehydrogenase 1 E260 | 8e-81 | ||
| 3ed6_A | 520 | 1.7 Angstrom Resolution Crystal Structure Of Betain | 3e-78 | ||
| 1a4s_A | 503 | Betaine Aldehyde Dehydrogenase From Cod Liver Lengt | 4e-78 | ||
| 3r31_A | 517 | Crystal Structure Of Betaine Aldehyde Dehydrogenase | 4e-76 | ||
| 3b4w_A | 495 | Crystal Structure Of Mycobacterium Tuberculosis Ald | 2e-75 | ||
| 3jz4_C | 481 | Crystal Structure Of E. Coli Nadp Dependent Enzyme | 3e-73 | ||
| 3jz4_A | 481 | Crystal Structure Of E. Coli Nadp Dependent Enzyme | 3e-73 | ||
| 3ek1_A | 504 | Crystal Structure Of Aldehyde Dehydrogenase From Br | 1e-72 | ||
| 2d4e_A | 515 | Crystal Structure Of The Hpcc From Thermus Thermoph | 2e-72 | ||
| 3u4j_A | 528 | Crystal Structure Of Nad-Dependent Aldehyde Dehydro | 5e-69 | ||
| 3ty7_A | 478 | Crystal Structure Of Aldehyde Dehydrogenase Family | 2e-68 | ||
| 3ifg_A | 484 | Crystal Structure Of Succinate-Semialdehyde Dehydro | 4e-68 | ||
| 1wnb_A | 495 | Escherichia Coli Ydcw Gene Product Is A Medium-Chai | 1e-65 | ||
| 2w8n_A | 487 | The Crytal Structure Of The Oxidized Form Of Human | 5e-64 | ||
| 2w8p_A | 487 | The Crystal Structure Of Human C340a Ssadh Length = | 7e-63 | ||
| 4dal_A | 498 | Crystal Structure Of Putative Aldehyde Dehydrogenas | 4e-62 | ||
| 3k2w_A | 497 | Crystal Structure Of Betaine-Aldehyde Dehydrogenase | 2e-61 | ||
| 3i44_A | 497 | Crystal Structure Of Aldehyde Dehydrogenase From Ba | 1e-59 | ||
| 2opx_A | 479 | Crystal Structure Of Lactaldehyde Dehydrogenase Fro | 2e-59 | ||
| 2imp_A | 479 | Crystal Structure Of Lactaldehyde Dehydrogenase Fro | 8e-59 | ||
| 2hg2_A | 479 | Structure Of Lactaldehyde Dehydrogenase Length = 47 | 9e-59 | ||
| 3qan_A | 538 | Crystal Structure Of 1-Pyrroline-5-Carboxylate Dehy | 6e-54 | ||
| 3rjl_A | 538 | Crystal Structure Of 1-Pyrroline-5-Carboxylate Dehy | 1e-51 | ||
| 3rh9_A | 506 | The Crystal Structure Of Oxidoreductase From Marino | 2e-51 | ||
| 1euh_A | 475 | Apo Form Of A Nadp Dependent Aldehyde Dehydrogenase | 6e-49 | ||
| 3r64_A | 508 | Crystal Structure Of A Nad-Dependent Benzaldehyde D | 1e-48 | ||
| 2id2_A | 475 | Gapn T244s Mutant X-Ray Structure At 2.5 A Length = | 2e-48 | ||
| 2esd_A | 475 | Crystal Structure Of Thioacylenzyme Intermediate Of | 3e-48 | ||
| 1qi1_A | 475 | Ternary Complex Of An Nadp Dependent Aldehyde Dehyd | 9e-48 | ||
| 4dng_A | 485 | Crystal Structure Of Putative Aldehyde Dehydrogenas | 2e-47 | ||
| 1t90_A | 486 | Crystal Structure Of Methylmalonate Semialdehyde De | 4e-47 | ||
| 3pqa_A | 486 | Crystal Structure Of Glyceraldehyde-3-Phosphate Deh | 7e-47 | ||
| 3prl_A | 505 | Crystal Structure Of Nadp-Dependent Glyceraldehyde- | 3e-46 | ||
| 4f9i_A | 1026 | Crystal Structure Of Proline Utilization A (Puta) F | 4e-45 | ||
| 1uzb_A | 516 | 1-pyrroline-5-carboxylate Dehydrogenase Length = 51 | 3e-44 | ||
| 2bhp_A | 516 | Crystal Analysis Of 1-Pyrroline-5-Carboxylate Dehyd | 5e-44 | ||
| 2bja_A | 516 | Crystal Analysis Of 1-Pyrroline-5-Carboxylate Dehyd | 1e-42 | ||
| 2jg7_A | 510 | Crystal Structure Of Seabream Antiquitin And Elucid | 5e-41 | ||
| 3efv_A | 462 | Crystal Structure Of A Putative Succinate-Semialdeh | 6e-39 | ||
| 4h7n_A | 474 | The Structure Of Putative Aldehyde Dehydrogenase Pu | 4e-38 | ||
| 2j6l_A | 500 | Structure Of Aminoadipate-Semialdehyde Dehydrogenas | 3e-37 | ||
| 4e4g_A | 521 | Crystal Structure Of Putative Methylmalonate-Semial | 3e-37 | ||
| 3ros_A | 484 | Crystal Structure Of Nad-Dependent Aldehyde Dehydro | 5e-37 | ||
| 1ky8_A | 501 | Crystal Structure Of The Non-Phosphorylating Glycer | 5e-35 | ||
| 1uxv_A | 501 | Structural Basis For Allosteric Regulation And Subs | 1e-34 | ||
| 3haz_A | 1001 | Crystal Structure Of Bifunctional Proline Utilizati | 2e-34 | ||
| 1uxn_A | 501 | Structural Basis For Allosteric Regulation And Subs | 2e-34 | ||
| 3lv1_A | 457 | Benzaldehyde Dehydrogenase, A Class 3 Aldehyde Dehy | 3e-34 | ||
| 3lns_A | 457 | Benzaldehyde Dehydrogenase, A Class 3 Aldehyde Dehy | 6e-33 | ||
| 3ju8_A | 490 | Crystal Structure Of Succinylglutamic Semialdehyde | 2e-30 | ||
| 3sza_A | 469 | Crystal Structure Of Human Aldh3a1 - Apo Form Lengt | 6e-28 | ||
| 1ad3_A | 452 | Class 3 Aldehyde Dehydrogenase Complex With Nicotin | 1e-27 | ||
| 3v9j_A | 563 | Crystal Structure Of Mouse 1-Pyrroline-5-Carboxylat | 1e-23 | ||
| 3v9g_A | 566 | Crystal Structure Of Human 1-Pyrroline-5-Carboxylat | 2e-23 | ||
| 3v9h_A | 566 | Crystal Structure Of Human 1-Pyrroline-5-Carboxylat | 5e-23 | ||
| 3v9i_A | 566 | Crystal Structure Of Human 1-Pyrroline-5-Carboxylat | 1e-22 | ||
| 2y51_A | 534 | Crystal Structure Of E167a Mutant Of The Box Pathwa | 5e-15 | ||
| 2y52_A | 534 | Crystal Structure Of E496a Mutant Of The Box Pathwa | 6e-15 | ||
| 2y53_A | 534 | Crystal Structure Of E257q Mutant Of The Box Pathwa | 6e-15 | ||
| 2vro_A | 532 | Crystal Structure Of Aldehyde Dehydrogenase From Bu | 7e-15 | ||
| 2y5d_A | 534 | Crystal Structure Of C296a Mutant Of The Box Pathwa | 1e-13 | ||
| 3my7_A | 452 | The Crystal Structure Of The Acdh Domain Of An Alco | 2e-06 | ||
| 1eyy_A | 510 | Crystal Structure Of The Nadp+ Dependent Aldehyde D | 2e-05 | ||
| 3v4c_A | 528 | Crystal Structure Of A Semialdehyde Dehydrogenase F | 2e-04 |
| >pdb|1BXS|A Chain A, Sheep Liver Class 1 Aldehyde Dehydrogenase With Nad Bound Length = 501 | Back alignment and structure |
|
| >pdb|1BI9|A Chain A, Retinal Dehydrogenase Type Two With Nad Bound Length = 499 | Back alignment and structure |
|
| >pdb|1O05|A Chain A, Apo Form Of Human Mitochondrial Aldehyde Dehydrogenase Length = 500 | Back alignment and structure |
|
| >pdb|1CW3|A Chain A, Human Mitochondrial Aldehyde Dehydrogenase Complexed With Nad+ And Mn2+ Length = 494 | Back alignment and structure |
|
| >pdb|1O9J|A Chain A, The X-Ray Crystal Structure Of Eta-Crystallin Length = 501 | Back alignment and structure |
|
| >pdb|2ONN|A Chain A, Arg475gln Mutant Of Human Mitochondrial Aldehyde Dehydrogenase, Apo Form Length = 500 | Back alignment and structure |
|
| >pdb|4FR8|A Chain A, Crystal Structure Of Human Aldehyde Dehydrogenase-2 In Complex With Nitroglycerin Length = 500 | Back alignment and structure |
|
| >pdb|3N81|A Chain A, T244a Mutant Of Human Mitochondrial Aldehyde Dehydrogenase, Apo Form Length = 500 | Back alignment and structure |
|
| >pdb|1NZW|A Chain A, Cys302ser Mutant Of Human Mitochondrial Aldehyde Dehydrogenase Complexed With Nadh And Mg2+ Length = 500 | Back alignment and structure |
|
| >pdb|3N80|A Chain A, Human Mitochondrial Aldehyde Dehydrogenase, Apo Form Length = 500 | Back alignment and structure |
|
| >pdb|1ZUM|A Chain A, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant, Aldh22, Apo Form Length = 500 | Back alignment and structure |
|
| >pdb|3INL|A Chain A, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant, Aldh22, Complexed With Agonist Alda-1 Length = 500 | Back alignment and structure |
|
| >pdb|1AG8|A Chain A, Aldehyde Dehydrogenase From Bovine Mitochondria Length = 499 | Back alignment and structure |
|
| >pdb|2O2P|A Chain A, Crystal Structure Of The C-Terminal Domain Of Rat 10'formyltetrahydrofolate Dehydrogenase Length = 517 | Back alignment and structure |
|
| >pdb|3RHM|A Chain A, Crystal Structure Of The E673q Mutant Of C-Terminal Domain Of 10'formyltetrahydrofolate Dehydrogenase Length = 517 | Back alignment and structure |
|
| >pdb|3RHJ|A Chain A, Crystal Structure Of The E673a Mutant Of The C-Terminal Domain Of Rat 10'formyltetrahydrofolate Dehydrogenase In Complex With Co-Purified Nadp Length = 517 | Back alignment and structure |
|
| >pdb|4GNZ|A Chain A, Crystal Structure Of The C707s Mutant Of C-terminal Domain Of 10'formyltetrahydrofolate Dehydrogenase In Complex With Nadp Length = 517 | Back alignment and structure |
|
| >pdb|3RHR|A Chain A, Crystal Structure Of The C707a Mutant Of The C-Terminal Domain Of 10'formyltetrahydrofolate Dehydrogenase In Complex With Nadph Length = 517 | Back alignment and structure |
|
| >pdb|3RHL|A Chain A, Crystal Structure Of The E673aC707A DOUBLE MUTANT OF THE C-Terminal Domain Of Rat 10'formyltetrahydrofolate Dehydrogenase In Complex With Co-Purified Nadp Length = 517 | Back alignment and structure |
|
| >pdb|4A0M|A Chain A, Crystal Structure Of Betaine Aldehyde Dehydrogenase From Spinach In Complex With Nad Length = 496 | Back alignment and structure |
|
| >pdb|4I8P|A Chain A, Crystal Structure Of Aminoaldehyde Dehydrogenase 1a From Zea Mays (zmamadh1a) Length = 520 | Back alignment and structure |
|
| >pdb|3IWJ|A Chain A, Crystal Structure Of Aminoaldehyde Dehydrogenase 2 From Pisum Sativum (Psamadh2) Length = 503 | Back alignment and structure |
|
| >pdb|2WME|A Chain A, Crystallographic Structure Of Betaine Aldehyde Dehydrogenase From Pseudomonas Aeruginosa Length = 490 | Back alignment and structure |
|
| >pdb|2WOX|A Chain A, Betaine Aldehyde Dehydrogenase From Pseudomonas Aeruginosa With Nad(P)h-Catalytic Thiol Adduct. Length = 489 | Back alignment and structure |
|
| >pdb|2XDR|A Chain A, Crystallographic Structure Of Betaine Aldehyde Dehydrogenase Mutant E252a From Pseudomonas Aeruginosa Length = 489 | Back alignment and structure |
|
| >pdb|3ZQA|A Chain A, Crystallographic Structure Of Betaine Aldehyde Dehydrogenase Mutant C286a From Pseudomonas Aeruginosa In Complex With Nadph Length = 490 | Back alignment and structure |
|
| >pdb|2WME|C Chain C, Crystallographic Structure Of Betaine Aldehyde Dehydrogenase From Pseudomonas Aeruginosa Length = 490 | Back alignment and structure |
|
| >pdb|3IWK|A Chain A, Crystal Structure Of Aminoaldehyde Dehydrogenase 1 From Pisum Sativum (Psamadh1) Length = 503 | Back alignment and structure |
|
| >pdb|4I9B|A Chain A, Structure Of Aminoaldehyde Dehydrogenase 1 From Solanum Lycopersium (slamadh1) With A Thiohemiacetal Intermediate Length = 517 | Back alignment and structure |
|
| >pdb|4I8Q|A Chain A, Structure Of The Aminoaldehyde Dehydrogenase 1 E260a Mutant From Solanum Lycopersicum (slamadh1-e260a) Length = 514 | Back alignment and structure |
|
| >pdb|3ED6|A Chain A, 1.7 Angstrom Resolution Crystal Structure Of Betaine Aldehyde Dehydrogenase (Betb) From Staphylococcus Aureus Length = 520 | Back alignment and structure |
|
| >pdb|1A4S|A Chain A, Betaine Aldehyde Dehydrogenase From Cod Liver Length = 503 | Back alignment and structure |
|
| >pdb|3R31|A Chain A, Crystal Structure Of Betaine Aldehyde Dehydrogenase From Agrobacterium Tumefaciens Length = 517 | Back alignment and structure |
|
| >pdb|3B4W|A Chain A, Crystal Structure Of Mycobacterium Tuberculosis Aldehyde Dehydrogenase Complexed With Nad+ Length = 495 | Back alignment and structure |
|
| >pdb|3JZ4|C Chain C, Crystal Structure Of E. Coli Nadp Dependent Enzyme Length = 481 | Back alignment and structure |
|
| >pdb|3JZ4|A Chain A, Crystal Structure Of E. Coli Nadp Dependent Enzyme Length = 481 | Back alignment and structure |
|
| >pdb|3EK1|A Chain A, Crystal Structure Of Aldehyde Dehydrogenase From Brucella Melitensis Biovar Abortus 2308 Length = 504 | Back alignment and structure |
|
| >pdb|2D4E|A Chain A, Crystal Structure Of The Hpcc From Thermus Thermophilus Hb8 Length = 515 | Back alignment and structure |
|
| >pdb|3U4J|A Chain A, Crystal Structure Of Nad-Dependent Aldehyde Dehydrogenase From Sinorhizobium Meliloti Length = 528 | Back alignment and structure |
|
| >pdb|3TY7|A Chain A, Crystal Structure Of Aldehyde Dehydrogenase Family Protein From Staphylococcus Aureus Length = 478 | Back alignment and structure |
|
| >pdb|3IFG|A Chain A, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase From Burkholderia Pseudomallei, Part 1 Of 2 Length = 484 | Back alignment and structure |
|
| >pdb|1WNB|A Chain A, Escherichia Coli Ydcw Gene Product Is A Medium-Chain Aldehyde Dehydrogenase (Complexed With Nadh And Betaine Aldehyde) Length = 495 | Back alignment and structure |
|
| >pdb|2W8N|A Chain A, The Crytal Structure Of The Oxidized Form Of Human Ssadh Length = 487 | Back alignment and structure |
|
| >pdb|2W8P|A Chain A, The Crystal Structure Of Human C340a Ssadh Length = 487 | Back alignment and structure |
|
| >pdb|4DAL|A Chain A, Crystal Structure Of Putative Aldehyde Dehydrogenase From Sinorhizobium Meliloti 1021 Length = 498 | Back alignment and structure |
|
| >pdb|3K2W|A Chain A, Crystal Structure Of Betaine-Aldehyde Dehydrogenase From Pseudoalteromonas Atlantica T6c Length = 497 | Back alignment and structure |
|
| >pdb|3I44|A Chain A, Crystal Structure Of Aldehyde Dehydrogenase From Bartonella Henselae At 2.0a Resolution Length = 497 | Back alignment and structure |
|
| >pdb|2OPX|A Chain A, Crystal Structure Of Lactaldehyde Dehydrogenase From Escherichia Coli Length = 479 | Back alignment and structure |
|
| >pdb|2IMP|A Chain A, Crystal Structure Of Lactaldehyde Dehydrogenase From E. Coli: The Ternary Complex With Product Bound (L)-Lactate And Nadh. Length = 479 | Back alignment and structure |
|
| >pdb|2HG2|A Chain A, Structure Of Lactaldehyde Dehydrogenase Length = 479 | Back alignment and structure |
|
| >pdb|3QAN|A Chain A, Crystal Structure Of 1-Pyrroline-5-Carboxylate Dehydrogenase From Bacillus Halodurans Length = 538 | Back alignment and structure |
|
| >pdb|3RJL|A Chain A, Crystal Structure Of 1-Pyrroline-5-Carboxylate Dehydrogenase From Bacillus Licheniformis (Target Nysgrc-000337) Length = 538 | Back alignment and structure |
|
| >pdb|3RH9|A Chain A, The Crystal Structure Of Oxidoreductase From Marinobacter Aquaeolei Length = 506 | Back alignment and structure |
|
| >pdb|1EUH|A Chain A, Apo Form Of A Nadp Dependent Aldehyde Dehydrogenase From Streptococcus Mutans Length = 475 | Back alignment and structure |
|
| >pdb|3R64|A Chain A, Crystal Structure Of A Nad-Dependent Benzaldehyde Dehydrogenase From Corynebacterium Glutamicum Length = 508 | Back alignment and structure |
|
| >pdb|2ID2|A Chain A, Gapn T244s Mutant X-Ray Structure At 2.5 A Length = 475 | Back alignment and structure |
|
| >pdb|2ESD|A Chain A, Crystal Structure Of Thioacylenzyme Intermediate Of An Nadp Dependent Aldehyde Dehydrogenase Length = 475 | Back alignment and structure |
|
| >pdb|1QI1|A Chain A, Ternary Complex Of An Nadp Dependent Aldehyde Dehydrogenase Length = 475 | Back alignment and structure |
|
| >pdb|4DNG|A Chain A, Crystal Structure Of Putative Aldehyde Dehydrogenase From Bacillus Subtilis Subsp. Subtilis Str. 168 Length = 485 | Back alignment and structure |
|
| >pdb|1T90|A Chain A, Crystal Structure Of Methylmalonate Semialdehyde Dehydrogenase From Bacillus Subtilis Length = 486 | Back alignment and structure |
|
| >pdb|3PQA|A Chain A, Crystal Structure Of Glyceraldehyde-3-Phosphate Dehydrogenase Gapn From Methanocaldococcus Jannaschii Dsm 2661 Length = 486 | Back alignment and structure |
|
| >pdb|3PRL|A Chain A, Crystal Structure Of Nadp-Dependent Glyceraldehyde-3-Phosphate Dehydrogenase From Bacillus Halodurans C-125 Length = 505 | Back alignment and structure |
|
| >pdb|4F9I|A Chain A, Crystal Structure Of Proline Utilization A (Puta) From Geobacter Sulfurreducens Pca Length = 1026 | Back alignment and structure |
|
| >pdb|1UZB|A Chain A, 1-pyrroline-5-carboxylate Dehydrogenase Length = 516 | Back alignment and structure |
|
| >pdb|2BHP|A Chain A, Crystal Analysis Of 1-Pyrroline-5-Carboxylate Dehydrogenase From Thermus With Bound Nad. Length = 516 | Back alignment and structure |
|
| >pdb|2BJA|A Chain A, Crystal Analysis Of 1-Pyrroline-5-Carboxylate Dehydrogenase From Thermus With Bound Nadh Length = 516 | Back alignment and structure |
|
| >pdb|2JG7|A Chain A, Crystal Structure Of Seabream Antiquitin And Elucidation Of Its Substrate Specificity Length = 510 | Back alignment and structure |
|
| >pdb|3EFV|A Chain A, Crystal Structure Of A Putative Succinate-Semialdehyde Dehydrogenase From Salmonella Typhimurium Lt2 With Bound Nad Length = 462 | Back alignment and structure |
|
| >pdb|4H7N|A Chain A, The Structure Of Putative Aldehyde Dehydrogenase Puta From Anabaena Variabilis. Length = 474 | Back alignment and structure |
|
| >pdb|2J6L|A Chain A, Structure Of Aminoadipate-Semialdehyde Dehydrogenase Length = 500 | Back alignment and structure |
|
| >pdb|4E4G|A Chain A, Crystal Structure Of Putative Methylmalonate-Semialdehyde Dehydrogenase From Sinorhizobium Meliloti 1021 Length = 521 | Back alignment and structure |
|
| >pdb|3ROS|A Chain A, Crystal Structure Of Nad-Dependent Aldehyde Dehydrogenase From Lactobacillus Acidophilus Length = 484 | Back alignment and structure |
|
| >pdb|1KY8|A Chain A, Crystal Structure Of The Non-Phosphorylating Glyceraldehyde-3- Phosphate Dehydrogenase Length = 501 | Back alignment and structure |
|
| >pdb|1UXV|A Chain A, Structural Basis For Allosteric Regulation And Substrate Specificity Of The Non-Phosphorylating Glyceraldehyde-3-Phosphate Dehydrogenase (Gapn) From Thermoproteus Tenax Length = 501 | Back alignment and structure |
|
| >pdb|3HAZ|A Chain A, Crystal Structure Of Bifunctional Proline Utilization A (Puta) Protein Length = 1001 | Back alignment and structure |
|
| >pdb|1UXN|A Chain A, Structural Basis For Allosteric Regulation And Substrate Specificity Of The Non-Phosphorylating Glyceraldehyde-3-Phosphate Dehydrogenase (Gapn) From Thermoproteus Tenax Length = 501 | Back alignment and structure |
|
| >pdb|3LV1|A Chain A, Benzaldehyde Dehydrogenase, A Class 3 Aldehyde Dehydrogenase, With Bound Nadp+ Length = 457 | Back alignment and structure |
|
| >pdb|3LNS|A Chain A, Benzaldehyde Dehydrogenase, A Class 3 Aldehyde Dehydrogenase, With Bound Nadp+ And Benzoate Adduct Length = 457 | Back alignment and structure |
|
| >pdb|3JU8|A Chain A, Crystal Structure Of Succinylglutamic Semialdehyde Dehydrogenase From Pseudomonas Aeruginosa. Length = 490 | Back alignment and structure |
|
| >pdb|3SZA|A Chain A, Crystal Structure Of Human Aldh3a1 - Apo Form Length = 469 | Back alignment and structure |
|
| >pdb|1AD3|A Chain A, Class 3 Aldehyde Dehydrogenase Complex With Nicotinamide- Adenine-Dinucleotide Length = 452 | Back alignment and structure |
|
| >pdb|3V9J|A Chain A, Crystal Structure Of Mouse 1-Pyrroline-5-Carboxylate Dehydrogenase Complexed With Sulfate Ion Length = 563 | Back alignment and structure |
|
| >pdb|3V9G|A Chain A, Crystal Structure Of Human 1-Pyrroline-5-Carboxylate Dehydrogenase Length = 566 | Back alignment and structure |
|
| >pdb|3V9H|A Chain A, Crystal Structure Of Human 1-Pyrroline-5-Carboxylate Dehydrogenase Mutant S352a Length = 566 | Back alignment and structure |
|
| >pdb|3V9I|A Chain A, Crystal Structure Of Human 1-Pyrroline-5-Carboxylate Dehydrogenase Mutant S352l Length = 566 | Back alignment and structure |
|
| >pdb|2Y51|A Chain A, Crystal Structure Of E167a Mutant Of The Box Pathway Encoded Aldh From Burkholderia Xenovorans Lb400 Length = 534 | Back alignment and structure |
|
| >pdb|2Y52|A Chain A, Crystal Structure Of E496a Mutant Of The Box Pathway Encoded Aldh From Burkholderia Xenovorans Lb400 Length = 534 | Back alignment and structure |
|
| >pdb|2Y53|A Chain A, Crystal Structure Of E257q Mutant Of The Box Pathway Encoded Aldh From Burkholderia Xenovorans Lb400 Length = 534 | Back alignment and structure |
|
| >pdb|2VRO|A Chain A, Crystal Structure Of Aldehyde Dehydrogenase From Burkholderia Xenovorans Lb400 Length = 532 | Back alignment and structure |
|
| >pdb|2Y5D|A Chain A, Crystal Structure Of C296a Mutant Of The Box Pathway Encoded Aldh From Burkholderia Xenovorans Lb400 Length = 534 | Back alignment and structure |
|
| >pdb|3MY7|A Chain A, The Crystal Structure Of The Acdh Domain Of An Alcohol Dehyd From Vibrio Parahaemolyticus To 2.25a Length = 452 | Back alignment and structure |
|
| >pdb|1EYY|A Chain A, Crystal Structure Of The Nadp+ Dependent Aldehyde Dehydrogenase From Vibrio Harveyi. Length = 510 | Back alignment and structure |
|
| >pdb|3V4C|A Chain A, Crystal Structure Of A Semialdehyde Dehydrogenase From Sinorhizobium Meliloti 1021 Length = 528 | Back alignment and structure |
|
Structure Templates Detected by RPS-BLAST 
Original result of RPS-BLAST against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 414 | |||
| 1bxs_A | 501 | Aldehyde dehydrogenase; retinal, class 1, tetramer | 0.0 | |
| 1o04_A | 500 | Aldehyde dehydrogenase, mitochondrial precursor; A | 0.0 | |
| 2ve5_A | 490 | BADH, betaine aldehyde dehydrogenase; aldehyde oxi | 0.0 | |
| 2o2p_A | 517 | Formyltetrahydrofolate dehydrogenase; aldehyde deh | 0.0 | |
| 3u4j_A | 528 | NAD-dependent aldehyde dehydrogenase; PSI-biology, | 0.0 | |
| 3iwj_A | 503 | Putative aminoaldehyde dehydrogenase; rossmann fol | 0.0 | |
| 3ed6_A | 520 | Betaine aldehyde dehydrogenase; structural genomic | 0.0 | |
| 3r31_A | 517 | BADH, betaine aldehyde dehydrogenase; structural g | 0.0 | |
| 1a4s_A | 503 | ALDH, betaine aldehyde dehydrogenase; oxidoreducta | 0.0 | |
| 2d4e_A | 515 | 5-carboxymethyl-2-hydroxymuconate semialdehyde deh | 0.0 | |
| 1wnd_A | 495 | Putative betaine aldehyde dehydrogenase; NADH, flu | 0.0 | |
| 4f3x_A | 498 | Putative aldehyde dehydrogenase; structural genomi | 0.0 | |
| 3b4w_A | 495 | Aldehyde dehydrogenase; RV0223C-NAD complex, struc | 0.0 | |
| 3qan_A | 538 | 1-pyrroline-5-carboxylate dehydrogenase 1; proline | 0.0 | |
| 3ty7_A | 478 | Putative aldehyde dehydrogenase SAV2122; structura | 0.0 | |
| 3i44_A | 497 | Aldehyde dehydrogenase; oxidoreductase, structural | 0.0 | |
| 1uzb_A | 516 | 1-pyrroline-5-carboxylate dehydrogenase; oxidoredu | 0.0 | |
| 3r64_A | 508 | NAD dependent benzaldehyde dehydrogenase; structur | 0.0 | |
| 1uxt_A | 501 | Glyceraldehyde-3-phosphate dehydrogenase (NADP+); | 0.0 | |
| 3prl_A | 505 | NADP-dependent glyceraldehyde-3-phosphate dehydro; | 0.0 | |
| 3ju8_A | 490 | Succinylglutamic semialdehyde dehydrogenase; alpha | 0.0 | |
| 3pqa_A | 486 | Lactaldehyde dehydrogenase; structural genomics, p | 0.0 | |
| 2y53_A | 534 | Aldehyde dehydrogenase (BOX pathway); oxidoreducta | 1e-179 | |
| 1euh_A | 475 | NADP dependent non phosphorylating glyceraldehyde- | 1e-167 | |
| 2imp_A | 479 | Lactaldehyde dehydrogenase; protein-lactate-NADH t | 1e-161 | |
| 4dng_A | 485 | Uncharacterized aldehyde dehydrogenase ALDY; struc | 1e-155 | |
| 4f9i_A | 1026 | Proline dehydrogenase/delta-1-pyrroline-5-carboxy | 1e-152 | |
| 2j6l_A | 500 | Aldehyde dehydrogenase family 7 member A1; NAD, re | 1e-147 | |
| 3k2w_A | 497 | Betaine-aldehyde dehydrogenase; structural genomic | 1e-147 | |
| 3jz4_A | 481 | Succinate-semialdehyde dehydrogenase [NADP+]; tetr | 1e-145 | |
| 3ifg_A | 484 | Succinate-semialdehyde dehydrogenase (NADP+); niai | 1e-145 | |
| 3ek1_A | 504 | Aldehyde dehydrogenase; ssgcid, oxidoreductase, st | 1e-144 | |
| 3ros_A | 484 | NAD-dependent aldehyde dehydrogenase; nysgrc, PSI- | 1e-143 | |
| 3rh9_A | 506 | Succinate-semialdehyde dehydrogenase (NAD(P)(+)); | 1e-143 | |
| 3etf_A | 462 | Putative succinate-semialdehyde dehydrogenase; cen | 1e-143 | |
| 2w8n_A | 487 | Succinate-semialdehyde dehydrogenase, mitochondria | 1e-141 | |
| 1ez0_A | 510 | ALDH, aldehyde dehydrogenase; nucleotide binding d | 1e-126 | |
| 3haz_A | 1001 | Proline dehydrogenase; proline utilization A, PUTA | 1e-112 | |
| 3my7_A | 452 | Alcohol dehydrogenase/acetaldehyde dehydrogenase; | 1e-112 | |
| 3v4c_A | 528 | Aldehyde dehydrogenase (NADP+); structural genomic | 1e-104 | |
| 1t90_A | 486 | MMSDH, probable methylmalonate-semialdehyde dehydr | 7e-97 | |
| 4e4g_A | 521 | Methylmalonate-semialdehyde dehydrogenase; structu | 1e-93 | |
| 3k9d_A | 464 | LMO1179 protein, aldehyde dehydrogenase; structura | 5e-90 | |
| 4e3x_A | 563 | Delta-1-pyrroline-5-carboxylate dehydrogenase, mit | 2e-81 | |
| 3sza_A | 469 | Aldehyde dehydrogenase, dimeric NADP-preferring; A | 1e-69 | |
| 3lns_A | 457 | Benzaldehyde dehydrogenase; oxidoreductase, NADP+, | 1e-61 | |
| 1vt4_I | 1221 | APAF-1 related killer DARK; drosophila apoptosome, | 2e-07 | |
| 1vt4_I | 1221 | APAF-1 related killer DARK; drosophila apoptosome, | 8e-05 |
| >1bxs_A Aldehyde dehydrogenase; retinal, class 1, tetramer, NAD, cytosolic, oxidoreductase; HET: NAD; 2.35A {Ovis aries} SCOP: c.82.1.1 PDB: 1o9j_A* 1bi9_A* Length = 501 | Back alignment and structure |
|---|
Score = 742 bits (1918), Expect = 0.0
Identities = 223/408 (54%), Positives = 300/408 (73%)
Query: 1 MLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMS 60
+ K ADLIE +LA +EA++ GKL S A + D+ G TLRY AG ADKI G + M
Sbjct: 89 LNKLADLIERDRLLLATMEAMNGGKLFSNAYLMDLGGCIKTLRYCAGWADKIQGRTIPMD 148
Query: 61 RALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHL 120
YT EP+GV G IIPWNFP MF K+ PAL+ G T++VKPAEQTPL AL+ L
Sbjct: 149 GNFFTYTRSEPVGVCGQIIPWNFPLLMFLWKIGPALSCGNTVVVKPAEQTPLTALHMGSL 208
Query: 121 AKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSL 180
K AG P GV+N+VPG+GPTAGAAI+SHMD+DKV+FTGST+VG+ + +AA SNLK VSL
Sbjct: 209 IKEAGFPPGVVNIVPGYGPTAGAAISSHMDVDKVAFTGSTEVGKLIKEAAGKSNLKRVSL 268
Query: 181 ELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAK 240
ELGGKSP ++F D D++ A + A G+ +++G+ C+A+SR++V+E IYDEF ++ VE+AK
Sbjct: 269 ELGGKSPCIVFADADLDNAVEFAHQGVFYHQGQCCIAASRLFVEESIYDEFVRRSVERAK 328
Query: 241 AWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIGKKGYYIEPTIFT 300
+V+G+P P V QGPQ+DK+Q+++IL IE GK+EGA L GG P G KGY+I+PT+F+
Sbjct: 329 KYVLGNPLTPGVSQGPQIDKEQYEKILDLIESGKKEGAKLECGGGPWGNKGYFIQPTVFS 388
Query: 301 NVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSIR 360
+VT+DM IAK EIFGPV +MKFK++++ IK ANNT YGL+AGI T D++ A TVS +++
Sbjct: 389 DVTDDMRIAKEEIFGPVQQIMKFKSLDDVIKRANNTFYGLSAGIFTNDIDKAITVSSALQ 448
Query: 361 AGIIWINCYFAFDSDCPYGGYKMSGFGRDCGLESLHNYLQVKSVVTPI 408
+G +W+NCY + CP+GG+KMSG GR+ G H Y +VK+V I
Sbjct: 449 SGTVWVNCYSVVSAQCPFGGFKMSGNGRELGEYGFHEYTEVKTVTIKI 496
|
| >1o04_A Aldehyde dehydrogenase, mitochondrial precursor; ALDH, NAD, NADH, isomerization, oxidoreductase; HET: NAD; 1.42A {Homo sapiens} SCOP: c.82.1.1 PDB: 1nzw_A* 3inl_A* 3n80_A* 1nzz_A* 1o00_A* 1nzx_A* 1o01_A* 1o05_A 1of7_A* 1o02_A* 3inj_A* 3sz9_A* 1zum_A 2onm_A* 2onp_A* 2onn_A 2ono_A* 3n81_A 3n82_A* 3n83_A* ... Length = 500 | Back alignment and structure |
|---|
Score = 741 bits (1916), Expect = 0.0
Identities = 217/408 (53%), Positives = 283/408 (69%)
Query: 1 MLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMS 60
+ + ADLIE LA LE LD GK + + + D+ LRYYAG ADK HG+ + +
Sbjct: 88 LNRLADLIERDRTYLAALETLDNGKPYVISYLVDLDMVLKCLRYYAGWADKYHGKTIPID 147
Query: 61 RALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHL 120
YT EP+GV G IIPWNFP M K+ PALA G +++K AEQTPL ALY A+L
Sbjct: 148 GDFFSYTRHEPVGVCGQIIPWNFPLLMQAWKLGPALATGNVVVMKVAEQTPLTALYVANL 207
Query: 121 AKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSL 180
K AG P GV+N+VPGFGPTAGAAIASH D+DKV+FTGST++GR + AA +SNLK V+L
Sbjct: 208 IKEAGFPPGVVNIVPGFGPTAGAAIASHEDVDKVAFTGSTEIGRVIQVAAGSSNLKRVTL 267
Query: 181 ELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAK 240
ELGGKSP +I D D++ A + A + FN+G+ A SR +VQE IYDEF ++ V +AK
Sbjct: 268 ELGGKSPNIIMSDADMDWAVEQAHFALFFNQGQCSCAGSRTFVQEDIYDEFVERSVARAK 327
Query: 241 AWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIGKKGYYIEPTIFT 300
+ VVG+PFD QGPQVD+ QF +IL YI GK+EGA LL GG +GY+I+PT+F
Sbjct: 328 SRVVGNPFDSKTEQGPQVDETQFKKILGYINTGKQEGAKLLCGGGIAADRGYFIQPTVFG 387
Query: 301 NVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSIR 360
+V + M IAK EIFGPVM ++KFKT+EE + ANN+ YGLAA + TKDL+ AN +S++++
Sbjct: 388 DVQDGMTIAKEEIFGPVMQILKFKTIEEVVGRANNSTYGLAAAVFTKDLDKANYLSQALQ 447
Query: 361 AGIIWINCYFAFDSDCPYGGYKMSGFGRDCGLESLHNYLQVKSVVTPI 408
AG +W+NCY F + P+GGYKMSG GR+ G L Y +VK+V +
Sbjct: 448 AGTVWVNCYDVFGAQSPFGGYKMSGSGRELGEYGLQAYTEVKTVTVKV 495
|
| >2o2p_A Formyltetrahydrofolate dehydrogenase; aldehyde dehydrogenase, FDH, oxidoreductase; 1.70A {Rattus norvegicus} PDB: 2o2q_A* 2o2r_A* 3rho_A* 3rhm_A* 3rhj_A* 3rhq_A* 3rhp_A* 3rhr_A* 3rhl_A* Length = 517 | Back alignment and structure |
|---|
Score = 735 bits (1899), Expect = 0.0
Identities = 176/410 (42%), Positives = 271/410 (66%), Gaps = 6/410 (1%)
Query: 1 MLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMS 60
+ + AD++E+H E LA +EALDAG +++ A + + T RY+AG DKI G + ++
Sbjct: 104 LYRLADVMEQHQEELATIEALDAGAVYTLALKTHVGMSIQTFRYFAGWCDKIQGATIPIN 163
Query: 61 RALQG----YTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALY 116
+A T +EP+GV G +IPWN+P M K + LAAG T+++KPA+ TPL AL
Sbjct: 164 QARPNRNLTLTKKEPVGVCGIVIPWNYPLMMLSWKTAACLAAGNTVVIKPAQVTPLTALK 223
Query: 117 FAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLK 176
FA L AG+P GV+N++PG G G ++ H D+ K+ FTGST+VG+ +M++ A SN+K
Sbjct: 224 FAELTLKAGIPKGVVNILPGSGSLVGQRLSDHPDVRKIGFTGSTEVGKHIMKSCALSNVK 283
Query: 177 PVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLV 236
VSLELGGKSPL+IF D D+N A M + + FNKGE C+A+ R++V+E I+++F +K+V
Sbjct: 284 KVSLELGGKSPLIIFADCDLNKAVQMGMSSVFFNKGENCIAAGRLFVEESIHNQFVQKVV 343
Query: 237 EKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIGKKGYYIEP 296
E+ + +G+P + GPQ + +++ Y + G +EGATL+ GG + + G++ +P
Sbjct: 344 EEVEKMKIGNPLERDTNHGPQNHEAHLRKLVEYCQRGVKEGATLVCGGNQVPRPGFFFQP 403
Query: 297 TIFTNVTEDMLIAKNEIFGPVMALMKFK--TVEEAIKSANNTRYGLAAGIMTKDLNVANT 354
T+FT+V + M IAK E FGP+M + +F V+ + AN T +GLA+G+ T+D+N A
Sbjct: 404 TVFTDVEDHMYIAKEESFGPIMIISRFADGDVDAVLSRANATEFGLASGVFTRDINKALY 463
Query: 355 VSRSIRAGIIWINCYFAFDSDCPYGGYKMSGFGRDCGLESLHNYLQVKSV 404
VS ++AG ++IN Y D P+GG+K SGFG+D G +L+ YL++K+V
Sbjct: 464 VSDKLQAGTVFINTYNKTDVAAPFGGFKQSGFGKDLGEAALNEYLRIKTV 513
|
| >3u4j_A NAD-dependent aldehyde dehydrogenase; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, tetramer; 2.00A {Sinorhizobium meliloti} Length = 528 | Back alignment and structure |
|---|
Score = 721 bits (1864), Expect = 0.0
Identities = 170/417 (40%), Positives = 243/417 (58%), Gaps = 5/417 (1%)
Query: 1 MLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMS 60
M K ADLI E LA++E+L+ GK + A+ G+I A+ Y AG A + G+
Sbjct: 91 MFKVADLILARQEELALIESLEVGKPIAQAR-GEIGFCADLWSYAAGQARALEGQTHNNI 149
Query: 61 RA-LQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAH 119
G LREP+GVVG I PWNFP + +V A+ +GCT+++KP+E T ++ A
Sbjct: 150 GDDRLGLVLREPVGVVGIITPWNFPFIIASERVPWAIGSGCTVVLKPSEFTSGTSIRLAE 209
Query: 120 LAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVS 179
LA+ AG+PDGV NVV G+G AG +A ++D V+FTGS VG ++ + AA +K V
Sbjct: 210 LAREAGIPDGVFNVVTGYGDPAGQVLAEDPNVDMVAFTGSVRVGTKLGEIAA-RTVKRVG 268
Query: 180 LELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKA 239
LELGGK P ++F D D++ AAD G+ N G+ C++ SR+ VQEGI D ++L++ +
Sbjct: 269 LELGGKGPQIVFADADLDAAADGIAYGVYHNAGQCCISGSRLLVQEGIRDALMERLLDIS 328
Query: 240 KAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIG-KKGYYIEPTI 298
+ GDP + + G + + +++ SY+ G GA LL GG+ IG + G Y PT+
Sbjct: 329 RKVAFGDPLNERTKIGAMISEAHAEKVHSYVTAGITSGAELLLGGERIGREAGLYYAPTV 388
Query: 299 FTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRS 358
F VT DM IA+ EIFGPV++ + FKT +EA+ AN T +GL+A + + +L A R
Sbjct: 389 FAGVTPDMSIAREEIFGPVLSTLTFKTADEAVALANATEFGLSASVWSTNLETALQTIRR 448
Query: 359 IRAGIIWINCYFAFDSDCPYGGYKMSGFGRDCGLESLHNYLQVKSVVTPI-FNSPWL 414
IRAG WIN + P GGYK SG GR+ G Y Q K V + +PW
Sbjct: 449 IRAGRCWINSVIDGTPELPIGGYKKSGLGRELGRYGFDEYSQFKGVHVTLGRPAPWF 505
|
| >3iwj_A Putative aminoaldehyde dehydrogenase; rossmann fold, dimer, betaine aldehyde dehydrogenase, NAD, oxidoreductase; HET: NAD; 2.15A {Pisum sativum} PDB: 3iwk_A* 4a0m_A* Length = 503 | Back alignment and structure |
|---|
Score = 717 bits (1854), Expect = 0.0
Identities = 187/419 (44%), Positives = 256/419 (61%), Gaps = 8/419 (1%)
Query: 1 MLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMS 60
+ A + E LA LE++D GK A DI A YYA A+K+
Sbjct: 78 LRAIAAKVTEKKPELAKLESIDCGKPLDEAA-WDIDDVAGCFEYYADLAEKLDARQKAPV 136
Query: 61 RALQG----YTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALY 116
+ LREPIGVVG I PWN+P M KV+PALAAGC I+KP+E L L
Sbjct: 137 SLPMDTFKSHVLREPIGVVGLITPWNYPMLMATWKVAPALAAGCAAILKPSELASLTCLE 196
Query: 117 FAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLK 176
+ K G+P GVLN++ G GP AGA +A+H D+DKV+FTGS+ G ++M AAA +K
Sbjct: 197 LGEICKEVGLPPGVLNILTGLGPEAGAPLATHPDVDKVAFTGSSATGSKIMTAAA-QLVK 255
Query: 177 PVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLV 236
PVSLELGGKSPL++F+DVD++ AA+ A+ G + G+IC A+SR+ + E I EF ++V
Sbjct: 256 PVSLELGGKSPLVVFEDVDLDKAAEWAIFGCFWTNGQICSATSRLILHESIATEFLNRIV 315
Query: 237 EKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIG--KKGYYI 294
+ K + DP + R GP V + Q+++IL ++ + K EGAT+LTGG KKG++I
Sbjct: 316 KWIKNIKISDPLEEGCRLGPVVSEGQYEKILKFVSNAKSEGATILTGGSRPEHLKKGFFI 375
Query: 295 EPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANT 354
EPTI T+VT +M I + E+FGPV+ + F T EEAI AN+T YGL A +++ DL
Sbjct: 376 EPTIITDVTTNMQIWREEVFGPVLCVKTFSTEEEAIDLANDTVYGLGAAVISNDLERCER 435
Query: 355 VSRSIRAGIIWINCYFAFDSDCPYGGYKMSGFGRDCGLESLHNYLQVKSVVTPIFNSPW 413
V+++ +AGI+W+NC + P+GG K SGFGR+ G L NYL VK V I PW
Sbjct: 436 VTKAFKAGIVWVNCSQPCFTQAPWGGVKRSGFGRELGEWGLDNYLSVKQVTQYISEEPW 494
|
| >3ed6_A Betaine aldehyde dehydrogenase; structural genomics, infecti deseases, NAD, oxidoreductase, PSI; 1.70A {Staphylococcus aureus} PDB: 3fg0_A* Length = 520 | Back alignment and structure |
|---|
Score = 717 bits (1852), Expect = 0.0
Identities = 163/418 (38%), Positives = 244/418 (58%), Gaps = 7/418 (1%)
Query: 1 MLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMS 60
+ AD I+EH E LA LE LD GK + D+ N Y+AG ADK GE++
Sbjct: 100 VRAIADKIKEHREALARLETLDTGKTLEESY-ADMDDIHNVFMYFAGLADKDGGEMIDSP 158
Query: 61 RA-LQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAH 119
+ ++EP+GVV I PWN+P K++PALA GC++++KP+E TPL +
Sbjct: 159 IPDTESKIVKEPVGVVTQITPWNYPLLQASWKIAPALATGCSLVMKPSEITPLTTIRVFE 218
Query: 120 LAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVS 179
L + G P G +N++ G G G ++ H ++D VSFTG + G+ +M+ AA +N+ ++
Sbjct: 219 LMEEVGFPKGTINLILGAGSEVGDVMSGHKEVDLVSFTGGIETGKHIMKNAA-NNVTNIA 277
Query: 180 LELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKA 239
LELGGK+P +IFDD D A D AL G F+ G++C A SR+ VQ I D+FE+ L+++
Sbjct: 278 LELGGKNPNIIFDDADFELAVDQALNGGYFHAGQVCSAGSRILVQNSIKDKFEQALIDRV 337
Query: 240 KAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIG----KKGYYIE 295
K +G+ FD GP + + ++I SY++ K EGAT+ GGK K G + E
Sbjct: 338 KKIKLGNGFDADTEMGPVISTEHRNKIESYMDVAKAEGATIAVGGKRPDRDDLKDGLFFE 397
Query: 296 PTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTV 355
PT+ TN M I + E+FGPV+ + F+T +EAI+ AN++ YGLA + +KD+ A V
Sbjct: 398 PTVITNCDTSMRIVQEEVFGPVVTVEGFETEQEAIQLANDSIYGLAGAVFSKDIGKAQRV 457
Query: 356 SRSIRAGIIWINCYFAFDSDCPYGGYKMSGFGRDCGLESLHNYLQVKSVVTPIFNSPW 413
+ ++ G +WIN + + + P+GGYK SG GR+ G E L YL K ++T
Sbjct: 458 ANKLKLGTVWINDFHPYFAQAPWGGYKQSGIGRELGKEGLEEYLVSKHILTNTNPQLV 515
|
| >3r31_A BADH, betaine aldehyde dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.15A {Agrobacterium tumefaciens} Length = 517 | Back alignment and structure |
|---|
Score = 713 bits (1844), Expect = 0.0
Identities = 169/419 (40%), Positives = 251/419 (59%), Gaps = 9/419 (2%)
Query: 1 MLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAG-AADKIHGEVLKM 59
+ + AD++ E + L+ LE LD GK + D A+ ++ G A ++G+ + +
Sbjct: 80 LKRAADIMRERNDALSTLETLDTGKPIQETIVADPTSGADAFEFFGGIAPSALNGDYIPL 139
Query: 60 SRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAH 119
YT R P+GV I WN+P + K +PAL AG M+ KP+E TPL AL A
Sbjct: 140 GGDF-AYTKRVPLGVCVGIGAWNYPQQIACWKAAPALVAGNAMVFKPSENTPLGALKIAE 198
Query: 120 LAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVS 179
+ AG+P G+ NV+ G T G + +H D+ KVS TGS GR+V AAA +LK V+
Sbjct: 199 ILIEAGLPKGLFNVIQGDRDT-GPLLVNHPDVAKVSLTGSVPTGRKVAAAAA-GHLKHVT 256
Query: 180 LELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKA 239
+ELGGKSP+++FDD D+ +A A+LG ++ G++C +RV+VQ+ F + L +
Sbjct: 257 MELGGKSPMIVFDDADIESAVGGAMLGNFYSSGQVCSNGTRVFVQKKAKARFLENLKRRT 316
Query: 240 KAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGK---PIGKKGYYIEP 296
+A ++GDP D A GP V K Q +++LSYIE GK EGATL+TGG + +G Y++P
Sbjct: 317 EAMILGDPLDYATHLGPLVSKAQQEKVLSYIEKGKAEGATLITGGGIPNNVAGEGAYVQP 376
Query: 297 TIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVS 356
T+F +VT+DM IA+ EIFGPVM ++ F +E + AN T +GLA G+ T DL A+ V
Sbjct: 377 TVFADVTDDMTIAREEIFGPVMCVLDFDDEDEVLARANATEFGLAGGVFTADLARAHRVV 436
Query: 357 RSIRAGIIWINCYFAFDSDCPYGGYKMSGFGRDCGLESLHNYLQVKSVV--TPIFNSPW 413
+ AG +WIN Y + P+GG K SGFGR+ +L +Y ++K+V T ++P+
Sbjct: 437 DGLEAGTLWINTYNLCPVEIPFGGSKQSGFGRENSAAALEHYSELKTVYVSTGKVDAPY 495
|
| >1a4s_A ALDH, betaine aldehyde dehydrogenase; oxidoreductase, aldehyde oxidation; 2.10A {Gadus callarias} SCOP: c.82.1.1 PDB: 1bpw_A* Length = 503 | Back alignment and structure |
|---|
Score = 712 bits (1840), Expect = 0.0
Identities = 166/420 (39%), Positives = 256/420 (60%), Gaps = 11/420 (2%)
Query: 1 MLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMS 60
ML+ A +I E + +A LE ++ GK + A+ DI A + YYAG A + G+ +++
Sbjct: 86 MLEAARIIRERRDNIAKLEVINNGKTITEAE-YDIDAAWQCIEYYAGLAPTLSGQHIQLP 144
Query: 61 RALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHL 120
YT REP+GV I+ WN+P + K +PALA G ++ KP+ TP+ + A +
Sbjct: 145 GGAFAYTRREPLGVCAGILAWNYPFMIAAWKCAPALACGNAVVFKPSPMTPVTGVILAEI 204
Query: 121 AKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSL 180
AGVP G++NVV G G G+ + H ++ KVSFTGS G++VM+ +A +K V+L
Sbjct: 205 FHEAGVPVGLVNVVQG-GAETGSLLCHHPNVAKVSFTGSVPTGKKVMEMSA-KTVKHVTL 262
Query: 181 ELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAK 240
ELGGKSPLLIF D ++ A AL+ +G++C +RV+VQ I +F +++V++ K
Sbjct: 263 ELGGKSPLLIFKDCELENAVRGALMANFLTQGQVCTNGTRVFVQREIMPQFLEEVVKRTK 322
Query: 241 AWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIG------KKGYYI 294
A VVGDP R G + K Q D++L ++ K+EGA +L GG+P+ K GY++
Sbjct: 323 AIVVGDPLLTETRMGGLISKPQLDKVLGFVAQAKKEGARVLCGGEPLTPSDPKLKNGYFM 382
Query: 295 EPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANT 354
P + N +DM K EIFGPVM+++ F T EE ++ ANNT +GLA+G+ T+D++ A+
Sbjct: 383 SPCVLDNCRDDMTCVKEEIFGPVMSVLPFDTEEEVLQRANNTTFGLASGVFTRDISRAHR 442
Query: 355 VSRSIRAGIIWINCYFAFDSDCPYGGYKMSGFGRDCGLESLHNYLQVKSVVTPI--FNSP 412
V+ ++ AG +IN Y + P+GGYKMSGFGR+ G ++ Y Q+K+V+ + +S
Sbjct: 443 VAANLEAGTCYINTYSISPVEVPFGGYKMSGFGRENGQATVDYYSQLKTVIVEMGDVDSL 502
|
| >2d4e_A 5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase; HPCC; HET: NAD; 2.10A {Thermus thermophilus} Length = 515 | Back alignment and structure |
|---|
Score = 698 bits (1803), Expect = 0.0
Identities = 169/421 (40%), Positives = 249/421 (59%), Gaps = 12/421 (2%)
Query: 1 MLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADK-IHGEVLKM 59
+L+ A+LIE+HA+ LAV+E LDAG++ + + AA +YA A+ + +
Sbjct: 92 LLRIAELIEKHADELAVMECLDAGQVLRIVR-AQVARAAENFAFYAEYAEHAMEDRTFPV 150
Query: 60 SRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAH 119
R YT+R P G VG I PWN P + +++PALA G T+++KPAE +P A A
Sbjct: 151 DRDWLYYTVRVPAGPVGIITPWNAPLMLSTWRIAPALAFGNTVVLKPAEWSPFTATKLAE 210
Query: 120 LAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVS 179
+ K A +P GV N+V GFG AGAA+ +H + ++ TG T+ G+ VM+ AA +LK +S
Sbjct: 211 ILKEADLPPGVFNLVQGFGEEAGAALVAHPLVPLLTLTGETETGKIVMRNAA-DHLKRLS 269
Query: 180 LELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKA 239
ELGGKSP L+F D D+ A D + I GE C ASSR+ V+E I+++F K+VE+A
Sbjct: 270 PELGGKSPALVFADADLERALDAVVFQIFSFNGERCTASSRLLVEEKIFEDFVGKVVERA 329
Query: 240 KAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIG--------KKG 291
+A VG P DP GP + + R+L Y+E GKREGA LL GG+ +G
Sbjct: 330 RAIRVGHPLDPETEVGPLIHPEHLQRVLGYVEAGKREGARLLVGGERAKTSFRGEDLSRG 389
Query: 292 YYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNV 351
Y+ PT+F M IA+ EIFGPV+ + FK EEA++ AN+T+YGLAA + T+DL
Sbjct: 390 NYLLPTVFVG-ENHMKIAQEEIFGPVLVAIPFKDEEEALRKANDTKYGLAAYVFTRDLER 448
Query: 352 ANTVSRSIRAGIIWINCYFAFDSDCPYGGYKMSGFGRDCGLESLHNYLQVKSVVTPIFNS 411
A+ ++ + AG++++N + P+GG K SG R+ G +L Y +K++ P+
Sbjct: 449 AHRLALELEAGMVYLNSHNVRHLPTPFGGVKGSGDRREGGTYALDFYTDLKTIALPLRPP 508
Query: 412 P 412
Sbjct: 509 H 509
|
| >1wnd_A Putative betaine aldehyde dehydrogenase; NADH, fluorescence, kinetics, oxidor; 2.10A {Escherichia coli} SCOP: c.82.1.1 PDB: 1wnb_A Length = 495 | Back alignment and structure |
|---|
Score = 688 bits (1777), Expect = 0.0
Identities = 149/406 (36%), Positives = 226/406 (55%), Gaps = 4/406 (0%)
Query: 1 MLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMS 60
+LK AD+IEE+ +V A LE+ + GK A +IP + R++AGAA ++G
Sbjct: 88 LLKLADVIEENGQVFAELESRNCGKPLHSAFNDEIPAIVDVFRFFAGAARCLNGLAAGEY 147
Query: 61 RA-LQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAH 119
R+P+GVV I PWN+P M K++PALAAG +++KP+E TPL AL A
Sbjct: 148 LEGHTSMIRRDPLGVVASIAPWNYPLMMAAWKLAPALAAGNCVVLKPSEITPLTALKLAE 207
Query: 120 LAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVS 179
LAK P GV+N++ G G T G + H + VS TGS G ++ A S++K
Sbjct: 208 LAKDI-FPAGVVNILFGRGKTVGDPLTGHPKVRMVSLTGSIATGEHIISHTA-SSIKRTH 265
Query: 180 LELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKA 239
+ELGGK+P+++FDD D+ + +N G+ C A+ R+Y Q+GIYD +KL
Sbjct: 266 MELGGKAPVIVFDDADIEAVVEGVRTFGYYNAGQDCTAACRIYAQKGIYDTLVEKLGAAV 325
Query: 240 KAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREG-ATLLTGGKPIGKKGYYIEPTI 298
G P D + GP +R+ +E K G ++TGG+ GYY PT+
Sbjct: 326 ATLKSGAPDDESTELGPLSSLAHLERVGKAVEEAKATGHIKVITGGEKRKGNGYYYAPTL 385
Query: 299 FTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRS 358
+D I + E+FGPV+++ F E+ + AN+++YGLA+ + TKD+ A+ VS
Sbjct: 386 LAGALQDDAIVQKEVFGPVVSVTPFDNEEQVVNWANDSQYGLASSVWTKDVGRAHRVSAR 445
Query: 359 IRAGIIWINCYFAFDSDCPYGGYKMSGFGRDCGLESLHNYLQVKSV 404
++ G W+N +F S+ P+GG K+SG+G+D L L +Y V+ V
Sbjct: 446 LQYGCTWVNTHFMLVSEMPHGGQKLSGYGKDMSLYGLEDYTVVRHV 491
|
| >4f3x_A Putative aldehyde dehydrogenase; structural genomics, protein structure initiative, nysgrc, P biology; HET: MSE NAD; 2.01A {Sinorhizobium meliloti} PDB: 4dal_A* Length = 498 | Back alignment and structure |
|---|
Score = 681 bits (1761), Expect = 0.0
Identities = 138/406 (33%), Positives = 228/406 (56%), Gaps = 4/406 (0%)
Query: 1 MLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMS 60
+LK AD IE+ A+ A LEAL+ GK + K ++P + R++AGA +H
Sbjct: 90 LLKIADAIEKEADEFAALEALNCGKPINAVKNDELPAIIDCWRFFAGAVRNLHAPAAGEY 149
Query: 61 RA-LQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAH 119
R+PIG+VG I PWN+P M K++PA+ G T++ KP+EQTPL AL A
Sbjct: 150 LPGHTSMIRRDPIGIVGSIAPWNYPLMMMAWKLAPAIGGGNTVVFKPSEQTPLTALKLAR 209
Query: 120 LAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVS 179
L +P+GV+NV+ G G T G A+ +H + VS TG G++V+ AAA +K
Sbjct: 210 LIADI-LPEGVVNVITGRGETVGNALINHPKVGMVSITGDIATGKKVLAAAA-KTVKRTH 267
Query: 180 LELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKA 239
LELGGK+P++++ D D+ + +N G+ C A+ R+Y + GIY++ L
Sbjct: 268 LELGGKAPVIVYGDADLEAVVNGIRTFGYYNAGQDCTAACRIYAEAGIYEKLVADLTSAV 327
Query: 240 KAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREG-ATLLTGGKPIGKKGYYIEPTI 298
D GP + ++Q DR+ S++E + + TGG+ +G++ +PT+
Sbjct: 328 STIRYNLDDDTENEIGPLISRRQRDRVASFVERAADQKHIEITTGGRTGSDEGFFFQPTV 387
Query: 299 FTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRS 358
T++ I + E+FGPV+++ +F ++A+ AN++ YGLA+ + TKD++ A +
Sbjct: 388 VAGATQEDEIVRREVFGPVVSVTRFTGKDDAVAWANDSDYGLASSVWTKDISKAMRAASR 447
Query: 359 IRAGIIWINCYFAFDSDCPYGGYKMSGFGRDCGLESLHNYLQVKSV 404
++ G WIN +F ++ P+GG K SG+G+D + +L +Y V+ +
Sbjct: 448 LQYGCTWINTHFMLTNEMPHGGIKQSGYGKDMSVYALEDYTAVRHI 493
|
| >3b4w_A Aldehyde dehydrogenase; RV0223C-NAD complex, structural genomics, PSI-2, protein STR initiative; HET: NAD GOL; 1.80A {Mycobacterium tuberculosis} Length = 495 | Back alignment and structure |
|---|
Score = 635 bits (1641), Expect = 0.0
Identities = 165/415 (39%), Positives = 238/415 (57%), Gaps = 5/415 (1%)
Query: 1 MLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMS 60
+ ++ E ++ L A + G+ + + G+ + Y+AGAADK+ +
Sbjct: 76 IAAAVKMLAERKDLFTKLLAAETGQPPTIIETMHWMGSMGAMNYFAGAADKVTWTETRTG 135
Query: 61 RALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHL 120
Q REP+GVVG I+ WN P + K++PAL AGCT+++KPA +TPL A A +
Sbjct: 136 SYGQSIVSREPVGVVGAIVAWNVPLFLAVNKIAPALLAGCTIVLKPAAETPLTANALAEV 195
Query: 121 AKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSL 180
G+P+GVL+VVPG G G A+ S+ DID +FTGS+ VGR+V + AA LKP +L
Sbjct: 196 FAEVGLPEGVLSVVPG-GIETGQALTSNPDIDMFTFTGSSAVGREVGRRAA-EMLKPCTL 253
Query: 181 ELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAK 240
ELGGKS +I +DVD+ A M + + N G+ CV +R+ YDE +
Sbjct: 254 ELGGKSAAIILEDVDLAAAIPMMVFSGVMNAGQGCVNQTRILAPRSRYDEIVAAVTNFVT 313
Query: 241 AWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIG--KKGYYIEPTI 298
A VG P DPA + GP + +KQ R+ YI G EGA L+ GG G++I+PT+
Sbjct: 314 ALPVGPPSDPAAQIGPLISEKQRTRVEGYIAKGIEEGARLVCGGGRPEGLDNGFFIQPTV 373
Query: 299 FTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRS 358
F +V M IA+ EIFGPV+A++ + T E+AI AN++ YGLA + T D+ +S+
Sbjct: 374 FADVDNKMTIAQEEIFGPVLAIIPYDTEEDAIAIANDSVYGLAGSVWTTDVPKGIKISQQ 433
Query: 359 IRAGIIWINCYFAFDSDCPYGGYKMSGFGRDCGLESLHNYLQVKSVVTPIFNSPW 413
IR G IN Y AFD P+GGYK SG GR+ G E + ++ Q KSV+ P+ +
Sbjct: 434 IRTGTYGINWY-AFDPGSPFGGYKNSGIGRENGPEGVEHFTQQKSVLLPMGYTVA 487
|
| >3qan_A 1-pyrroline-5-carboxylate dehydrogenase 1; proline oxidation, redox control, apoptosis, NAD binding, oxidoreductase, PSI-biology; 1.95A {Bacillus halodurans} PDB: 3rjl_A Length = 538 | Back alignment and structure |
|---|
Score = 620 bits (1600), Expect = 0.0
Identities = 140/413 (33%), Positives = 218/413 (52%), Gaps = 11/413 (2%)
Query: 1 MLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMS 60
++K A +I + +AGK A D A + L YYA +++ +S
Sbjct: 102 LVKAAAIIRRRKHEFSAWLVHEAGKPWKEAD-ADTAEAIDFLEYYARQMIELNRGKEILS 160
Query: 61 RA-LQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAH 119
R Q P+GV I PWNF + + G T+++KPA TP++A F
Sbjct: 161 RPGEQNRYFYTPMGVTVTISPWNFALAIMVGTAVAPIVTGNTVVLKPASTTPVVAAKFVE 220
Query: 120 LAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAAT-----SN 174
+ + AG+P GV+N VPG G G + H ++FTGS DVG ++ + AA ++
Sbjct: 221 VLEDAGLPKGVINYVPGSGAEVGDYLVDHPKTSLITFTGSKDVGVRLYERAAVVRPGQNH 280
Query: 175 LKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKK 234
LK V +E+GGK +++ D D++ AA+ L+ G+ C A SR + + +YDE +K
Sbjct: 281 LKRVIVEMGGKDTVVVDRDADLDLAAESILVSAFGFSGQKCSAGSRAVIHKDVYDEVLEK 340
Query: 235 LVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIGKKGYYI 294
V AK VGDP + GP +D+K F++I+SYIE GK+EG L+TGG+ G++I
Sbjct: 341 TVALAKNLTVGDPTNRDNYMGPVIDEKAFEKIMSYIEIGKKEG-RLMTGGEGDSSTGFFI 399
Query: 295 EPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANT 354
+PTI ++ + +I + EIFGPV+A K + A++ ANNT YGL ++T++
Sbjct: 400 QPTIIADLDPEAVIMQEEIFGPVVAFSKANDFDHALEIANNTEYGLTGAVITRNRAHIEQ 459
Query: 355 VSRSIRAGIIWIN--CYFAFDSDCPYGGYKMSGFG-RDCGLESLHNYLQVKSV 404
R G ++ N C A P+GG+KMSG + G + L ++Q K+V
Sbjct: 460 AKREFHVGNLYFNRNCTGAIVGYHPFGGFKMSGTDSKAGGPDYLALHMQAKTV 512
|
| >3ty7_A Putative aldehyde dehydrogenase SAV2122; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE; 2.40A {Staphylococcus aureus} Length = 478 | Back alignment and structure |
|---|
Score = 617 bits (1593), Expect = 0.0
Identities = 158/408 (38%), Positives = 225/408 (55%), Gaps = 9/408 (2%)
Query: 1 MLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMS 60
+ K E + + + G S ++ N A D E
Sbjct: 73 LDKIVKEYENRKDDIVQAITDELGAPLSLSERVHYQMGLNHFVAARDALDNYEFE----E 128
Query: 61 RALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHL 120
R ++E IGV G I PWNFPT +K++ A AAG +++KP+E+TP A+ A +
Sbjct: 129 RRGDDLVVKEAIGVSGLITPWNFPTNQTSLKLAAAFAAGSPVVLKPSEETPFAAVILAEI 188
Query: 121 AKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSL 180
GVP GV N+V G G G ++ H + +SFTGS G ++M+ AA + K VSL
Sbjct: 189 FDKVGVPKGVFNLVNGDGAGVGNPLSEHPKVRMMSFTGSGPTGSKIMEKAA-KDFKKVSL 247
Query: 181 ELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAK 240
ELGGKSP ++ DDVD+ AA ++ N G++C A +RV V I D F +L E+
Sbjct: 248 ELGGKSPYIVLDDVDIKEAAKATTGKVVNNTGQVCTAGTRVLVPNKIKDAFLAELKEQFS 307
Query: 241 AWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGG--KPIG-KKGYYIEPT 297
VG+P + + GP + KKQFD++ +YI G EGA L GG KP G +KGY+ PT
Sbjct: 308 QVRVGNPREDGTQVGPIISKKQFDQVQNYINKGIEEGAELFYGGPGKPEGLEKGYFARPT 367
Query: 298 IFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVSR 357
IF NV M IA+ EIFGPVM+++ + ++EAI+ AN+T+YGLA ++ KD + V+R
Sbjct: 368 IFINVDNQMTIAQEEIFGPVMSVITYNDLDEAIQIANDTKYGLAGYVIGKDKETLHKVAR 427
Query: 358 SIRAGIIWINCYFAFDSDCPYGGYKMSGFGRDCGLESLHNYLQVKSVV 405
SI AG + IN D P+GGYK SG GR+ G + +L+VKS+
Sbjct: 428 SIEAGTVEINEA-GRKPDLPFGGYKQSGLGREWGDYGIEEFLEVKSIA 474
|
| >3i44_A Aldehyde dehydrogenase; oxidoreductase, structural genomics, seattle structural genomics center for infectious disease, ssgcid; 2.00A {Bartonella henselae} Length = 497 | Back alignment and structure |
|---|
Score = 615 bits (1588), Expect = 0.0
Identities = 141/407 (34%), Positives = 228/407 (56%), Gaps = 6/407 (1%)
Query: 1 MLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMS 60
+ K ++ E+ + +A +++ G A ++ +R + A + + +
Sbjct: 91 VEKILEIYEKRSSDMAKTISMEMGAPIDMALNAQTATGSSHIRNFIKAYKEFSFQEALIE 150
Query: 61 RALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHL 120
Q + IGVVG I PWN+P +KV PAL AGCTM++KP+E PL A+ FA +
Sbjct: 151 GNEQAILHYDAIGVVGLITPWNWPMNQVTLKVIPALLAGCTMVLKPSEIAPLSAMLFAEI 210
Query: 121 AKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSL 180
A +P GV N++ G G G+ +++H D++ +SFTGST G+ + + A+ + LK V L
Sbjct: 211 LDEAALPSGVFNLINGDGANVGSYLSAHPDLEMISFTGSTRAGKDISKNAS-NTLKRVCL 269
Query: 181 ELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAK 240
ELGGK +IF D D++ A + +N G+ C A +R+ V++ IYD+ K + A+
Sbjct: 270 ELGGKGANIIFADADID-ALQRGVRHCFYNSGQSCNAPTRMLVEQAIYDKAIKTAKDIAE 328
Query: 241 AWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGG--KPIG-KKGYYIEPT 297
VG GP V K+Q+D+I I+ G EGATL+TGG P+G ++GYY+ PT
Sbjct: 329 KTQVGPGHQTGNHIGPVVSKEQYDKIQDLIQSGIDEGATLVTGGTGLPMGMERGYYVRPT 388
Query: 298 IFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVSR 357
+F +V M I + EIFGPV++L+ F T +EA+ AN+T YGL I ++D + ++
Sbjct: 389 VFADVKPHMRIFREEIFGPVLSLLPFNTEDEAVTLANDTEYGLTNYIQSQDRSKCRRIAA 448
Query: 358 SIRAGIIWINCYFAFDSDCPYGGYKMSGFGRDCGLESLHNYLQVKSV 404
+R+G++ +N + +GG K SG R+ GL + +L K++
Sbjct: 449 QVRSGMVEVNGH-ELPGGSYFGGVKFSGRAREGGLWGIKEFLDTKAI 494
|
| >1uzb_A 1-pyrroline-5-carboxylate dehydrogenase; oxidoreductase, riken structural genomics/proteomics initiative, RSGI, structural genomics; 1.4A {Thermus thermophilus} SCOP: c.82.1.1 PDB: 2eiw_A 2bhq_A* 2bhp_A* 2bja_A* 2bjk_A* 2ehq_A* 2ehu_A* 2eii_A* 2eit_A* 2ej6_A 2ejd_A* 2ejl_A 2iy6_A* 2j40_A* 2j5n_A* Length = 516 | Back alignment and structure |
|---|
Score = 572 bits (1478), Expect = 0.0
Identities = 131/414 (31%), Positives = 215/414 (51%), Gaps = 13/414 (3%)
Query: 1 MLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMS 60
+LK A L+ L + GK A D+ A + + YYA AA + +++
Sbjct: 102 LLKAAALMRRRKRELEATLVYEVGKNWVEAS-ADVAEAIDFIEYYARAALRYRYPAVEVV 160
Query: 61 RA--LQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFA 118
+ P+G I PWNFP +F + +A G T+I KPAE ++
Sbjct: 161 PYPGEDNESFYVPLGAGVVIAPWNFPVAIFTGMIVGPVAVGNTVIAKPAEDAVVVGAKVF 220
Query: 119 HLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAA-----TS 173
+ AG P GV+N +PG G GA + H I ++FTGS +VG ++ +AA +
Sbjct: 221 EIFHEAGFPPGVVNFLPGVGEEVGAYLVEHPRIRFINFTGSLEVGLKIYEAAGRLAPGQT 280
Query: 174 NLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEK 233
K +E GGK+ +++ + D + AA+ ++ +G+ C A+SR+ + +G Y+ +
Sbjct: 281 WFKRAYVETGGKNAIIVDETADFDLAAEGVVVSAYGFQGQKCSAASRLILTQGAYEPVLE 340
Query: 234 KLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIGKKGYY 293
+++++A+ VG P + GP V +Q ++LSYIE GK EG L+ GGK + +GY+
Sbjct: 341 RVLKRAERLSVG-PAEENPDLGPVVSAEQERKVLSYIEIGKNEGQ-LVLGGKRLEGEGYF 398
Query: 294 IEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVAN 353
I PT+FT V IA+ EIFGPV+++++ K EA++ AN+T YGL G+ ++
Sbjct: 399 IAPTVFTEVPPKARIAQEEIFGPVLSVIRVKDFAEALEVANDTPYGLTGGVYSRKREHLE 458
Query: 354 TVSRSIRAGIIWIN--CYFAFDSDCPYGGYKMSGFGRDCG-LESLHNYLQVKSV 404
R G ++ N A P+GG+K+SG G L+ L +L++K+V
Sbjct: 459 WARREFHVGNLYFNRKITGALVGVQPFGGFKLSGTNAKTGALDYLRLFLEMKAV 512
|
| >3r64_A NAD dependent benzaldehyde dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.57A {Corynebacterium glutamicum} Length = 508 | Back alignment and structure |
|---|
Score = 553 bits (1428), Expect = 0.0
Identities = 138/408 (33%), Positives = 217/408 (53%), Gaps = 8/408 (1%)
Query: 1 MLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMS 60
+ + A+L+EEH E + ++G S A +I A N + A ++HG + +
Sbjct: 78 IYRAAELLEEHREEIVEWLIKESGSTRSKAN-LEITLAGNITKESASFPGRVHGRISPSN 136
Query: 61 RA-LQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALY-FA 118
+ R GVVG I PWNFP + V+PALA G +++KPA TP+ A
Sbjct: 137 TPGKENRVYRVAKGVVGVISPWNFPLNLSIRSVAPALAVGNAVVIKPASDTPVTGGVIPA 196
Query: 119 HLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATS-NLKP 177
+ + AGVP GV++ V G G G +H +SFTGST VGR+V + A +K
Sbjct: 197 RIFEEAGVPAGVISTVAGAGSEIGDHFVTHAVPKLISFTGSTPVGRRVGELAINGGPMKT 256
Query: 178 VSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVE 237
V+LELGG +P ++ D D++ AA A +G ++G+IC++ +RV V ++DEF +K VE
Sbjct: 257 VALELGGNAPFVVLADADIDAAAQAAAVGAFLHQGQICMSINRVIVDAAVHDEFLEKFVE 316
Query: 238 KAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIGKKGYYIEPT 297
K GDP GP ++ Q + IE K+EGAT+ G +G + P
Sbjct: 317 AVKNIPTGDPSAEGTLVGPVINDSQLSGLKEKIELAKKEGATVQVEGPI---EGRLVHPH 373
Query: 298 IFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVSR 357
+F++VT DM IA+ EIFGP+++++K A + AN + +GL+A + +KD++ A +
Sbjct: 374 VFSDVTSDMEIAREEIFGPLISVLKADDEAHAAELANASDFGLSAAVWSKDIDRAAQFAL 433
Query: 358 SIRAGIIWINCYFAFDS-DCPYGGYKMSGFGRDCGLESLHNYLQVKSV 404
I +G++ IN D +GG K SG GR G ++ + + +
Sbjct: 434 QIDSGMVHINDLTVNDEPHVMFGGSKNSGLGRFNGDWAIEEFTTDRWI 481
|
| >1uxt_A Glyceraldehyde-3-phosphate dehydrogenase (NADP+); GAPN, ALDH, glucose 1-phosphate, glycolysis, regulation, catatysis, oxidoreductase; HET: G1P NAD; 2.2A {Thermoproteus tenax} SCOP: c.82.1.1 PDB: 1uxp_A* 1uxq_A* 1uxr_A* 1uxn_A* 1uxu_A* 1uxv_A* 1ky8_A* Length = 501 | Back alignment and structure |
|---|
Score = 526 bits (1357), Expect = 0.0
Identities = 121/414 (29%), Positives = 200/414 (48%), Gaps = 16/414 (3%)
Query: 1 MLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMS 60
+ K AD+IE + +V A + ++AGK S A G++ A + LR KI G+ +
Sbjct: 83 LRKAADIIERNLDVFAEVLVMNAGKPKSAAV-GEVKAAVDRLRLAELDLKKIGGDYIPGD 141
Query: 61 RALQG-----YTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIAL 115
REP+GVV I P+N+P K++ + G ++VKP+ PL A
Sbjct: 142 WTYDTLETEGLVRREPLGVVAAITPFNYPLFDAVNKITYSFIYGNAVVVKPSISDPLPAA 201
Query: 116 YFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNL 175
AG P + ++ G I + + VSFTGST+VG +V++ +
Sbjct: 202 MAVKALLDAGFPPDAIALLNLPGKE-AEKIVADDRVAAVSFTGSTEVGERVVKVGG---V 257
Query: 176 KPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKL 235
K +ELGG P ++ +D D++ AAD GI G+ C A V + +Y + +++
Sbjct: 258 KQYVMELGGGDPAIVLEDADLDLAADKIARGIYSYAGQRCDAIKLVLAERPVYGKLVEEV 317
Query: 236 VEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIGKKGYYIE 295
++ + VGDP DP V GP + D +++ IE +G +L GG+ +G Y++
Sbjct: 318 AKRLSSLRVGDPRDPTVDVGPLISPSAVDEMMAAIEDAVEKGGRVLAGGRRLG--PTYVQ 375
Query: 296 PTIF---TNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVA 352
PT + +DM++ K E+F PV ++ K +++AI+ AN YGL A + +D+
Sbjct: 376 PTFVEAPADRVKDMVLYKREVFAPVALAVEVKDLDQAIELANGRPYGLDAAVFGRDVVKI 435
Query: 353 NTVSRSIRAGIIWINCYFAFDSD-CPYGGYKMSGFGRDCGLESLHNYLQVKSVV 405
R + G I+IN P+GG K SG R+ ++ K++V
Sbjct: 436 RRAVRLLEVGAIYINDMPRHGIGYYPFGGRKKSGVFREGIGYAVEAVTAYKTIV 489
|
| >3prl_A NADP-dependent glyceraldehyde-3-phosphate dehydro; structural genomics, protein structure initiative, dehydroge PSI-biology; 2.00A {Bacillus halodurans} PDB: 3rhh_A* Length = 505 | Back alignment and structure |
|---|
Score = 518 bits (1336), Expect = 0.0
Identities = 136/412 (33%), Positives = 205/412 (49%), Gaps = 15/412 (3%)
Query: 1 MLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMS 60
+ +ADL+EE E++ L + K A G++ A+ +R+ A A +++GE LK
Sbjct: 77 LYAWADLLEERKEIIGELIMHEVAKPKKSAI-GEVSRTADIIRHTADEALRLNGETLKGD 135
Query: 61 RALQG------YTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIA 114
+ G REP+GVV I P+N+P + K++PAL G T++ KPA Q L
Sbjct: 136 QFKGGSSKKIALVEREPLGVVLAISPFNYPVNLAAAKIAPALVTGNTVVFKPATQGSLSG 195
Query: 115 LYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSN 174
+ AG P+G++ VV G G G + H ID ++FTG T G ++ + A
Sbjct: 196 IKMVEALADAGAPEGIIQVVTGRGSVIGDHLVEHPGIDMITFTGGTTTGERISEKA---K 252
Query: 175 LKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKK 234
+ PV LELGGK P ++ DD D+ A + G G+ C A RV+VQ+ + D+
Sbjct: 253 MIPVVLELGGKDPAIVLDDADLKLTASQIVSGAFSYSGQRCTAIKRVFVQDSVADQLVAN 312
Query: 235 LVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIGKKGYYI 294
+ E + VG P D P +D+K I I+ GATLL+G K +G +
Sbjct: 313 IKELVEQLTVGSPEDD-ADITPVIDEKSAAFIQGLIDDALENGATLLSGNKR---QGNLL 368
Query: 295 EPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANT 354
PT+ +VT M +A E FGPV+ +++ K EAI +N + YGL A I TKD + A
Sbjct: 369 SPTLLDDVTPAMRVAWEEPFGPVLPIIRVKDANEAISLSNQSDYGLQASIFTKDTDRAIN 428
Query: 355 VSRSIRAGIIWINCYFAFDSDC-PYGGYKMSGFGRDCGLESLHNYLQVKSVV 405
+ + + G + IN D P+ G K SG G SL + + + V
Sbjct: 429 IGKHLEVGTVHINAKTERGPDHFPFLGVKKSGLGVQGIKPSLLSMTRERVTV 480
|
| >3ju8_A Succinylglutamic semialdehyde dehydrogenase; alpha-beta structure, structural genomics, PSI-2, protein ST initiative; HET: NAD; 1.82A {Pseudomonas aeruginosa} Length = 490 | Back alignment and structure |
|---|
Score = 516 bits (1332), Expect = 0.0
Identities = 113/421 (26%), Positives = 182/421 (43%), Gaps = 12/421 (2%)
Query: 1 MLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMS 60
+ +FA ++ A+ LA + + GK + ++ N + A + GE
Sbjct: 70 LERFAATLKSRADELARVIGEETGKPLWESA-TEVTSMVNKVAISVQAFRERTGEKSGPL 128
Query: 61 RALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHL 120
+P GVV P+NFP + + PAL AG ++ KP+E TP +A
Sbjct: 129 ADATAVLRHKPHGVVAVFGPYNFPGHLPNGHIVPALLAGNCVVFKPSELTPKVAELTLKA 188
Query: 121 AKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSL 180
AG+P GVLN+V G G G A+A+H +D + FTGS+ G + K ++L
Sbjct: 189 WIQAGLPAGVLNLVQG-GRETGVALAAHRGLDGLFFTGSSRTGNLLHSQFGGQPQKILAL 247
Query: 181 ELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIY-DEFEKKLVEKA 239
E+GG +PL++ + D++ A + + G+ C + R+ V +G + D +LV +
Sbjct: 248 EMGGNNPLVVEEVADLDAAVYTIIQSAFISAGQRCTCARRLLVPQGAWGDALLARLVAVS 307
Query: 240 KAWVVGDPF-DPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIGKKGYYIEPTI 298
VG PA G + + +L EH +GA L + P I
Sbjct: 308 ATLRVGRFDEQPAPFMGAVISLSAAEHLLKAQEHLIGKGAQPLLAMTQPIDGAALLTPGI 367
Query: 299 FTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRS 358
+V+ E FGP++ ++++ AI+ AN T+YGLAAG+++
Sbjct: 368 L-DVSAVAERPDEEFFGPLLQVIRYSDFAAAIREANATQYGLAAGLLSDSRERFEQFLVE 426
Query: 359 IRAGIIWINCYFAF-DSDCPYGGYKMSGFGRDCGLESLHNY------LQVKSVVTPIFNS 411
RAGI+ N S P+GG SG R + L+ SV P +
Sbjct: 427 SRAGIVNWNKQLTGAASSAPFGGIGASGNHRPSAYYAADYCAYPVASLESPSVSLPATLT 486
Query: 412 P 412
P
Sbjct: 487 P 487
|
| >3pqa_A Lactaldehyde dehydrogenase; structural genomics, protein structure initiative, nysgrc, P biology, oxidoreductase; 1.50A {Methanocaldococcus jannaschii} PDB: 3rhd_A* Length = 486 | Back alignment and structure |
|---|
Score = 514 bits (1327), Expect = 0.0
Identities = 130/410 (31%), Positives = 210/410 (51%), Gaps = 15/410 (3%)
Query: 1 MLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMS 60
++ A I+E E LA + A+DAGK A+ ++ + T + A + EV+
Sbjct: 62 LMNIAKQIKEKKEELAKILAIDAGKPIKQAR-VEVERSIGTFKLAAFYVKEHRDEVIPSD 120
Query: 61 RALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHL 120
L +T REP+G+VG I P+NFP + K++PA+A G ++ P+ + PL+ + A +
Sbjct: 121 DRL-IFTRREPVGIVGAITPFNFPLNLSAHKIAPAIATGNVIVHHPSSKAPLVCIELAKI 179
Query: 121 AKLA----GVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLK 176
+ A VP GV N++ G G G I + ++ +SFTGS+ VG + + A K
Sbjct: 180 IENALKKYNVPLGVYNLLTGAGEVVGDEIVVNEKVNMISFTGSSKVGELITKKAG---FK 236
Query: 177 PVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLV 236
++LELGG +P ++ D D+N A + + G G++C++ + V E I D+F + V
Sbjct: 237 KIALELGGVNPNIVLKDADLNKAVNALIKGSFIYAGQVCISVGMILVDESIADKFIEMFV 296
Query: 237 EKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIGKKGYYIEP 296
KAK VG+P D GP + + + + +E EG LL GGK P
Sbjct: 297 NKAKVLNVGNPLDEKTDVGPLISVEHAEWVEKVVEKAIDEGGKLLLGGKR---DKALFYP 353
Query: 297 TIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVS 356
TI V D ++ K E F PV+ +++ EE I AN+T YGL + I T D+N + +
Sbjct: 354 TIL-EVDRDNILCKTETFAPVIPIIRTNE-EEMIDIANSTEYGLHSAIFTNDINKSLKFA 411
Query: 357 RSIRAGIIWINCYFAFDSD-CPYGGYKMSGFGRDCGLESLHNYLQVKSVV 405
++ G + IN F D P+GG K SG GR+ ++ +K+++
Sbjct: 412 ENLEFGGVVINDSSLFRQDNMPFGGVKKSGLGREGVKYAMEEMSNIKTII 461
|
| >2y53_A Aldehyde dehydrogenase (BOX pathway); oxidoreductase, NADP, nucleotide-binding; HET: NAP; 1.40A {Burkholderia xenovorans LB400} PDB: 2y52_A 2y51_A 2vro_A* 2y5d_A* Length = 534 | Back alignment and structure |
|---|
Score = 510 bits (1315), Expect = e-179
Identities = 87/448 (19%), Positives = 161/448 (35%), Gaps = 48/448 (10%)
Query: 1 MLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMS 60
+ L++ + ++G + + DI G TL YYA +
Sbjct: 72 LADIVKLLQAKRGDYYAIATANSGTTRNDSA-VDIDGGIFTLSYYAKLGASLGEVHALRD 130
Query: 61 RALQG----------YTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQT 110
+ + + L GV I +NFP+ + K +PAL +G +IVKPA T
Sbjct: 131 GSAESLSKDRSFSAQHVLSPTRGVALFINAFNFPSWGLWEKAAPALLSGVPVIVKPATAT 190
Query: 111 PLIALYFAHLAKLAGV-PDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQA 169
+ AG+ P G L+++ G ++ + D VSFTGS D +
Sbjct: 191 AWLTQRMVADVVDAGILPPGALSIICG---SSAGLLDQIRSFDVVSFTGSADTAATLRAH 247
Query: 170 AA-TSNLKPVSLELGGKSPLLIFDDVDVNT-----AADMALLGILFNKGEICVASSRVYV 223
A ++++ + ++ D +T + + G+ C A R +V
Sbjct: 248 PAFVQRGARLNVQADSLNSAILCADATPDTPAFDLFIKEVVREMTVKSGQKCTAIRRAFV 307
Query: 224 QEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTG 283
E + + L K VG+P + AVR G V ++Q++ +L+ I + E
Sbjct: 308 PEAALEPVLEALKAKLAKITVGNPRNDAVRMGSLVSREQYENVLAGIAALREEAVLAYDS 367
Query: 284 GK-----PIGKKGYYIEPTIF--TNVTEDMLIAKNEIFGPVMALMKFKTV--------EE 328
+ P +F + L+ E+FGPV ++ ++
Sbjct: 368 SAVPLIDADANIAACVAPHLFVVNDPDNATLLHDVEVFGPVASVAPYRVTTDTNALPEAH 427
Query: 329 AIKSANNTRYGLAAGIMTKDLNVANTVSRSIRAGIIWINCYFAFDSD-----------CP 377
A+ A + L A I + D ++ + ++
Sbjct: 428 AVALARRGQGSLVASIYSNDDAHLGRLALELADSHGRVHAISPSVQHSQTGHGNVMPMSL 487
Query: 378 YGGYKMSGFGRDC-GLESLHNYLQVKSV 404
+GG +G G + GL +L Y + ++
Sbjct: 488 HGGPGRAGGGEELGGLRALAFYHRRSAI 515
|
| >1euh_A NADP dependent non phosphorylating glyceraldehyde-3-phosphate dehydrogenase; oxidoreductase; 1.82A {Streptococcus mutans} SCOP: c.82.1.1 PDB: 1qi6_A 2euh_A* 2id2_A* 2qe0_A* 2esd_A* 1qi1_A* Length = 475 | Back alignment and structure |
|---|
Score = 475 bits (1225), Expect = e-167
Identities = 133/412 (32%), Positives = 201/412 (48%), Gaps = 15/412 (3%)
Query: 1 MLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMS 60
+ K AD++ E + + + + K + A ++ A + Y A ++ GEVL+
Sbjct: 68 LHKVADILMRDKEKIGAILSKEVAKGYKSAV-SEVVRTAEIINYAAEEGLRMEGEVLEGG 126
Query: 61 RAL------QGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIA 114
REP+G+V I P+N+P + K++PAL AG + KP Q +
Sbjct: 127 SFEAASKKKIAVVRREPVGLVLAISPFNYPVNLAGSKIAPALIAGNVIAFKPPTQGSISG 186
Query: 115 LYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSN 174
L A AG+P GV N + G G G I H ++ ++FTGST +G ++ + A
Sbjct: 187 LLLAEAFAEAGLPAGVFNTITGRGSEIGDYIVEHQAVNFINFTGSTGIGERIGKMAG--- 243
Query: 175 LKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKK 234
++P+ LELGGK ++ +D D+ A + G G+ C A RV V E + DE +K
Sbjct: 244 MRPIMLELGGKDSAIVLEDADLELTAKNIIAGAFGYSGQRCTAVKRVLVMESVADELVEK 303
Query: 235 LVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIGKKGYYI 294
+ EK A +G+P D P +D K D + I +GAT LT K +G I
Sbjct: 304 IREKVLALTIGNPEDD-ADITPLIDTKSADYVEGLINDANDKGATALTEIKR---EGNLI 359
Query: 295 EPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANT 354
P +F VT DM +A E FGPV+ +++ +VEEAI+ +N + YGL A I T D A
Sbjct: 360 CPILFDKVTTDMRLAWEEPFGPVLPIIRVTSVEEAIEISNKSEYGLQASIFTNDFPRAFG 419
Query: 355 VSRSIRAGIIWINCYFAFDSD-CPYGGYKMSGFGRDCGLESLHNYLQVKSVV 405
++ + G + IN +D P+ G K SG G S+ VKSVV
Sbjct: 420 IAEQLEVGTVHINNKTQRGTDNFPFLGAKKSGAGIQGVKYSIEAMTTVKSVV 471
|
| >2imp_A Lactaldehyde dehydrogenase; protein-lactate-NADH ternary complex, oxidoreductase; HET: NAI; 2.10A {Escherichia coli} PDB: 2ilu_A* 2hg2_A* 2opx_A* Length = 479 | Back alignment and structure |
|---|
Score = 461 bits (1188), Expect = e-161
Identities = 141/406 (34%), Positives = 221/406 (54%), Gaps = 4/406 (0%)
Query: 1 MLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMS 60
+ K + I E A ++ L + GK+ A+ ++ A+ + Y A A + GE+++
Sbjct: 72 LRKISAGIRERASEISALIVEEGGKIQQLAE-VEVAFTADYIDYMAEWARRYEGEIIQSD 130
Query: 61 RA-LQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAH 119
R + +GV I+PWNFP + K++PAL G T+++KP+E TP A+ FA
Sbjct: 131 RPGENILLFKRALGVTTGILPWNFPFFLIARKMAPALLTGNTIVIKPSEFTPNNAIAFAK 190
Query: 120 LAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVS 179
+ G+P GV N+V G G T G +A + + VS TGS G ++M AA N+ V
Sbjct: 191 IVDEIGLPRGVFNLVLGRGETVGQELAGNPKVAMVSMTGSVSAGEKIMATAA-KNITKVC 249
Query: 180 LELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKA 239
LELGGK+P ++ DD D+ A + + N G++C + RVYVQ+GIYD+F +L E
Sbjct: 250 LELGGKAPAIVMDDADLELAVKAIVDSRVINSGQVCNCAERVYVQKGIYDQFVNRLGEAM 309
Query: 240 KAWVVGDPFD-PAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIGKKGYYIEPTI 298
+A G+P + + GP ++ +R+ + EGA + GGK + KGYY PT+
Sbjct: 310 QAVQFGNPAERNDIAMGPLINAAALERVEQKVARAVEEGARVAFGGKAVEGKGYYYPPTL 369
Query: 299 FTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRS 358
+V ++M I E FGPV+ ++ F T+E+AI AN++ YGL + I T++LNVA +
Sbjct: 370 LLDVRQEMSIMHEETFGPVLPVVAFDTLEDAISMANDSDYGLTSSIYTQNLNVAMKAIKG 429
Query: 359 IRAGIIWINCYFAFDSDCPYGGYKMSGFGRDCGLESLHNYLQVKSV 404
++ G +IN + G++ SG G G LH YLQ + V
Sbjct: 430 LKFGETYINRENFEAMQGFHAGWRKSGIGGADGKHGLHEYLQTQVV 475
|
| >4dng_A Uncharacterized aldehyde dehydrogenase ALDY; structural genomics, protein structure initiative, nysgrc, P biology; 2.50A {Bacillus subtilis} Length = 485 | Back alignment and structure |
|---|
Score = 446 bits (1150), Expect = e-155
Identities = 117/408 (28%), Positives = 198/408 (48%), Gaps = 9/408 (2%)
Query: 1 MLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHG-EVLKM 59
+ K + E+ + + ++ A + G + ++ L ++ G + +
Sbjct: 72 LQKARGYLHENRDDIIMMIARETGGTIIKST-IELEQTIAILDEAMTYTGELGGVKEVPS 130
Query: 60 SRA-LQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIA-LYF 117
R P+GV+ I P+NFP + ++PA+A G +++ KP QT +
Sbjct: 131 DIEGKTNKIYRLPLGVISSISPFNFPMNLSMRSIAPAIALGNSVVHKPDIQTAISGGTII 190
Query: 118 AHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKP 177
A + AG+P GVLNV+ G + ++ +SFTGST VGR + + A K
Sbjct: 191 AKAFEHAGLPAGVLNVMLTDVKEIGDGMLTNPIPRLISFTGSTAVGRHIGEIAG-RAFKR 249
Query: 178 VSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVE 237
++LELGG +P + D DV+ A D A+ G ++G+IC+ +R+ V + +YDEF +K
Sbjct: 250 MALELGGNNPFAVLSDADVDRAVDAAIFGKFIHQGQICMIINRIIVHQDVYDEFVEKFTA 309
Query: 238 KAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIGKKGYYIEPT 297
+ K GD DP GP ++++Q ++ L IE K +G L GK G + P
Sbjct: 310 RVKQLPYGDQTDPKTVVGPLINERQIEKALEIIEQAKTDGIELAVEGKR---VGNVLTPY 366
Query: 298 IFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVSR 357
+F + IA+ E+F P+ ++K + +EAI AN+T YGL++ + T DL +
Sbjct: 367 VFVGADNNSKIAQTELFAPIATIIKAGSDQEAIDMANDTEYGLSSAVFTSDLEKGEKFAL 426
Query: 358 SIRAGIIWINCYFAFDS-DCPYGGYKMSGFGRDCGLESLHNYLQVKSV 404
I +G+ +N DS + +GG K SG GR + + K +
Sbjct: 427 QIDSGMTHVNDQSVNDSPNIAFGGNKASGVGRFGNPWVVEEFTVTKWI 474
|
| >4f9i_A Proline dehydrogenase/delta-1-pyrroline-5-carboxy dehydrogenase; proline utilization A, PUTA, flavoenzyme, structural genomic biology; HET: FAD MES; 2.20A {Geobacter sulfurreducens} Length = 1026 | Back alignment and structure |
|---|
Score = 454 bits (1171), Expect = e-152
Identities = 136/414 (32%), Positives = 209/414 (50%), Gaps = 13/414 (3%)
Query: 1 MLKFADLIEEHAEVLAVLEALDAGKLHSWAK-MGDIPGAANTLRYYAGAADKIHGEVLKM 59
+LK A + L+ + L+ GK W + D+ A + L YYA ++
Sbjct: 596 LLKAAQAARKRLFELSAWQVLEIGK--QWDQAYADVTEAIDFLEYYAREMIRLGQPQRVG 653
Query: 60 SRALQG-YTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFA 118
+ + EP GV I PWNFP + S A+ G ++ KP+ T +I +
Sbjct: 654 HAPGELNHYFYEPKGVAAVIAPWNFPLAISMGMASAAIVTGNCVVFKPSGITSIIGWHLV 713
Query: 119 HLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAAT-----S 173
L + AG+P+GV N PG G G + H DI ++FTGS + G ++++ AA +
Sbjct: 714 ELFREAGLPEGVFNFTPGRGSVMGDYLVDHPDISLIAFTGSMETGLRIIERAAKVHPGQA 773
Query: 174 NLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEK 233
N+K + E+GGK+ ++I DD D++ A L +G+ C A SRV V + +YD+F +
Sbjct: 774 NVKKIISEMGGKNAIIIDDDADLDEAVPHVLYSAFGFQGQKCSACSRVIVLDAVYDKFIE 833
Query: 234 KLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIGKKGYY 293
+LV AKA VG DPA G D K I Y E GKREG L P +GY+
Sbjct: 834 RLVSMAKATKVGPSEDPANYMGAVADDKAMKSIKEYAEIGKREGHVLYESPVP-AGEGYF 892
Query: 294 IEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVAN 353
+ TI + + IA+ EIFGPV+A+M+ K ++AI+ AN+T++ L GI ++
Sbjct: 893 VPMTIIGGIKPEHRIAQEEIFGPVLAVMRAKDFDQAIEWANSTQFALTGGIFSRSPEHLA 952
Query: 354 TVSRSIRAGIIWINCYF--AFDSDCPYGGYKMSGFG-RDCGLESLHNYLQVKSV 404
R R G ++IN A P+GG +MSG G + G + L +++ + V
Sbjct: 953 KARREFRVGNLYINRNNTGALVERQPFGGARMSGVGTKAGGPDYLLHFMDPRVV 1006
|
| >2j6l_A Aldehyde dehydrogenase family 7 member A1; NAD, reductase, oxidoreductase, lysine catabolism; HET: NAI; 1.3A {Homo sapiens} PDB: 2jg7_A* Length = 500 | Back alignment and structure |
|---|
Score = 426 bits (1099), Expect = e-147
Identities = 118/410 (28%), Positives = 197/410 (48%), Gaps = 11/410 (2%)
Query: 3 KFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMSRA 62
+ D + E +VL L +L+ GK+ G++ + Y G + I G +L R+
Sbjct: 89 QIGDALREKIQVLGSLVSLEMGKILVEGV-GEVQEYVDICDYAVGLSRMIGGPILPSERS 147
Query: 63 LQG-YTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLA 121
P+G+VG I +NFP ++ + A+ G + K A T LI++ +
Sbjct: 148 GHALIEQWNPVGLVGIITAFNFPVAVYGWNNAIAMICGNVCLWKGAPTTSLISVAVTKII 207
Query: 122 ----KLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKP 177
+ +P + ++ G G G A+A ++ +SFTGST VG+QV
Sbjct: 208 AKVLEDNKLPGAICSLTCG-GADIGTAMAKDERVNLLSFTGSTQVGKQVGLMVQ-ERFGR 265
Query: 178 VSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVE 237
LELGG + ++ F+D D++ AL + G+ C + R+++ E I+DE +L +
Sbjct: 266 SLLELGGNNAIIAFEDADLSLVVPSALFAAVGTAGQRCTTARRLFIHESIHDEVVNRLKK 325
Query: 238 KAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIGKKGYYIEPT 297
VG+P+DP V GP K+ L +E K+EG T++ GGK + + G Y+EPT
Sbjct: 326 AYAQIRVGNPWDPNVLYGPLHTKQAVSMFLGAVEEAKKEGGTVVYGGKVMDRPGNYVEPT 385
Query: 298 IFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTV-- 355
I T + D IA E F P++ + KF+ EE N + GL++ I TKDL
Sbjct: 386 IVTGLGHDASIAHTETFAPILYVFKFQNEEEVFAWNNEVKQGLSSSIFTKDLGRIFRWLG 445
Query: 356 SRSIRAGIIWINCYFA-FDSDCPYGGYKMSGFGRDCGLESLHNYLQVKSV 404
+ GI+ +N + + +GG K +G GR+ G ++ Y++ +
Sbjct: 446 PKGSDCGIVNVNIPTSGAEIGGAFGGEKHTGGGRESGSDAWKQYMRRSTC 495
|
| >3k2w_A Betaine-aldehyde dehydrogenase; structural genomics, PSI-2, protein initiative; 1.90A {Pseudoalteromonas atlantica T6C} Length = 497 | Back alignment and structure |
|---|
Score = 426 bits (1097), Expect = e-147
Identities = 141/409 (34%), Positives = 222/409 (54%), Gaps = 7/409 (1%)
Query: 1 MLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMS 60
+ FA+ I E+ +LA + + GKL S A+ ++ A + Y A I G++L
Sbjct: 78 LRTFANKIRENKHILAPMLVAEQGKLLSVAE-MEVDVTATFIDYGCDNALTIEGDILPSD 136
Query: 61 RA-LQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAH 119
+ Y + P GVV I WNFP + K+ PAL G TM++KP ++TPL
Sbjct: 137 NQDEKIYIHKVPRGVVVGITAWNFPLALAGRKIGPALITGNTMVLKPTQETPLATTELGR 196
Query: 120 LAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVS 179
+AK AG+PDGVLNV+ G G G + ++ TGST G+Q+ + +A + PV
Sbjct: 197 IAKEAGLPDGVLNVINGTGSVVGQTLCESPITKMITMTGSTVAGKQIYKTSA-EYMTPVM 255
Query: 180 LELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKA 239
LELGGK+P+++ DD D++ AA+ AL G N G++C R+YV +YDEF K +
Sbjct: 256 LELGGKAPMVVMDDADLDKAAEDALWGRFANCGQVCTCVERLYVHASVYDEFMAKFLPLV 315
Query: 240 KAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPI----GKKGYYIE 295
K VGDP D + GP+ ++++ D I + ++GAT+ TGGK + G + E
Sbjct: 316 KGLKVGDPMDADSQMGPKCNQREIDNIDHIVHEAIKQGATVATGGKTATVEGFEGGCWYE 375
Query: 296 PTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTV 355
PT+ +V +D ++ E FGP++ ++K ++E+AI+ N++ YGL+A + T+ N
Sbjct: 376 PTVLVDVKQDNIVVHEETFGPILPIVKVSSMEQAIEFCNDSIYGLSAYVHTQSFANINQA 435
Query: 356 SRSIRAGIIWINCYFAFDSDCPYGGYKMSGFGRDCGLESLHNYLQVKSV 404
+ G ++IN + G+K SGFG + G L YL+ K+V
Sbjct: 436 ISDLEVGEVYINRGMGEQHQGFHNGWKQSGFGGEDGKFGLEQYLEKKTV 484
|
| >3jz4_A Succinate-semialdehyde dehydrogenase [NADP+]; tetramer, NADP binding, oxidoreductase; HET: NAP; 2.30A {Escherichia coli} Length = 481 | Back alignment and structure |
|---|
Score = 420 bits (1083), Expect = e-145
Identities = 158/405 (39%), Positives = 239/405 (59%), Gaps = 3/405 (0%)
Query: 1 MLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMS 60
+ + +L+ EH + LA L L+ GK + AK G+I AA+ + ++A +I+G+ +
Sbjct: 75 LRNWFNLMMEHQDDLARLMTLEQGKPLAEAK-GEISYAASFIEWFAEEGKRIYGDTIPGH 133
Query: 61 RA-LQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAH 119
+A + +++PIGV I PWNFP M K PALAAGCTM++KPA QTP AL A
Sbjct: 134 QADKRLIVIKQPIGVTAAITPWNFPAAMITRKAGPALAAGCTMVLKPASQTPFSALALAE 193
Query: 120 LAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVS 179
LA AGVP GV NVV G G + S+ + K+SFTGST++GRQ+M+ A ++K VS
Sbjct: 194 LAIRAGVPAGVFNVVTGSAGAVGNELTSNPLVRKLSFTGSTEIGRQLMEQCA-KDIKKVS 252
Query: 180 LELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKA 239
LELGG +P ++FDD D++ A + AL N G+ CV ++R+YVQ+G+YD F +KL +
Sbjct: 253 LELGGNAPFIVFDDADLDKAVEGALASKFRNAGQTCVCANRLYVQDGVYDRFAEKLQQAM 312
Query: 240 KAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIGKKGYYIEPTIF 299
+GD D V GP +D+K ++ +I +GA ++ GGK + G + +PTI
Sbjct: 313 SKLHIGDGLDNGVTIGPLIDEKAVAKVEEHIADALEKGARVVCGGKAHERGGNFFQPTIL 372
Query: 300 TNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSI 359
+V + ++K E FGP+ L +FK + I AN+T +GLAA +DL+ V ++
Sbjct: 373 VDVPANAKVSKEETFGPLAPLFRFKDEADVIAQANDTEFGLAAYFYARDLSRVFRVGEAL 432
Query: 360 RAGIIWINCYFAFDSDCPYGGYKMSGFGRDCGLESLHNYLQVKSV 404
GI+ IN + P+GG K SG GR+ + +YL++K +
Sbjct: 433 EYGIVGINTGIISNEVAPFGGIKASGLGREGSKYGIEDYLEIKYM 477
|
| >3ifg_A Succinate-semialdehyde dehydrogenase (NADP+); niaid,.infectious disease, ssgcid, seattle structural genomi for infectious disease; 2.70A {Burkholderia pseudomallei} PDB: 3ifh_Q Length = 484 | Back alignment and structure |
|---|
Score = 420 bits (1083), Expect = e-145
Identities = 151/409 (36%), Positives = 235/409 (57%), Gaps = 3/409 (0%)
Query: 1 MLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMS 60
+ ++ DL+ +++ LA++ + GK + AK G+I AA+ + ++A ++ G+ L
Sbjct: 78 LRRWFDLVIANSDDLALILTTEQGKPLAEAK-GEIAYAASFIEWFAEEGKRVAGDTLPTP 136
Query: 61 RA-LQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAH 119
A + ++EPIGV I PWNFP M KV PALAAGC ++VKPAE TP AL A
Sbjct: 137 DANKRIVVVKEPIGVCAAITPWNFPAAMIARKVGPALAAGCPIVVKPAESTPFSALAMAF 196
Query: 120 LAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVS 179
LA+ AGVP GVL+VV G G I S+ + K+SFTGST VGR +M +A +K ++
Sbjct: 197 LAERAGVPKGVLSVVIGDPKAIGTEITSNPIVRKLSFTGSTAVGRLLMAQSA-PTVKKLT 255
Query: 180 LELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKA 239
LELGG +P ++FDD D++ A + A+ N G+ CV ++R +V E +YD F KL
Sbjct: 256 LELGGNAPFIVFDDADLDAAVEGAIASKYRNNGQTCVCTNRFFVHERVYDAFADKLAAAV 315
Query: 240 KAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIGKKGYYIEPTIF 299
VG + GP +++ ++ S+I +GA+L+TGGK + EPT+
Sbjct: 316 SKLKVGRGTESGATLGPLINEAAVKKVESHIADALAKGASLMTGGKRHALGHGFFEPTVL 375
Query: 300 TNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSI 359
T V DM +AK E FGP+ L +F + EE ++ AN+T +GLAA + ++D+ V+ ++
Sbjct: 376 TGVKPDMDVAKEETFGPLAPLFRFASEEELVRLANDTEFGLAAYLYSRDIGRVWRVAEAL 435
Query: 360 RAGIIWINCYFAFDSDCPYGGYKMSGFGRDCGLESLHNYLQVKSVVTPI 408
G++ IN + P+GG K SG GR+ + +Y+ +K + +
Sbjct: 436 EYGMVGINTGLISNEVAPFGGVKQSGLGREGSHYGIDDYVVIKYLCVAV 484
|
| >3ek1_A Aldehyde dehydrogenase; ssgcid, oxidoreductase, structural genomics; HET: MES; 2.10A {Brucella melitensis biovar ABORTUS2308} Length = 504 | Back alignment and structure |
|---|
Score = 418 bits (1078), Expect = e-144
Identities = 164/405 (40%), Positives = 248/405 (61%), Gaps = 5/405 (1%)
Query: 1 MLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMS 60
+ K+ DLI +A+ +A++ + GK + A+ G++ AA+ + ++A A +++G+ +
Sbjct: 98 LRKWFDLIIANADDIALIMTSEQGKPLAEAR-GEVLYAASFIEWFAEEAKRVYGDTIPAP 156
Query: 61 RA-LQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAH 119
+ + +R+P+GV I PWNFP M K +PALAAGCTMIV+PA+ TPL AL
Sbjct: 157 QNGQRLTVIRQPVGVTAAITPWNFPAAMITRKAAPALAAGCTMIVRPADLTPLTALALGV 216
Query: 120 LAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVS 179
LA+ AG+P GVL +V G GA + S+ + K+SFTGST+VGR +M A +K +S
Sbjct: 217 LAEKAGIPAGVLQIVTGKAREIGAELTSNDTVRKLSFTGSTEVGRLLMAQCA-PTIKRIS 275
Query: 180 LELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKA 239
LELGG +P ++FDD D++ A D A++ N G+ CV ++R+YVQ G+YD+F +KL K
Sbjct: 276 LELGGNAPFIVFDDADLDAAVDGAMVSKYRNAGQTCVCANRIYVQRGVYDKFAEKLAAKV 335
Query: 240 KAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIGKKGYYIEPTIF 299
K VG+ +P V GP +++K ++ ++IE +GA L+TGGK +G G + EP I
Sbjct: 336 KELKVGNGTEPGVVIGPMIEEKAITKVKAHIEDAVSKGAKLITGGKELG--GLFFEPGIL 393
Query: 300 TNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSI 359
T VT DML+AK E FGP+ L F T EE I AN+T +GLAA T++ + A VS ++
Sbjct: 394 TGVTSDMLVAKEETFGPLAPLFAFDTEEEVIAQANDTIFGLAAYFYTENFSRAIRVSEAL 453
Query: 360 RAGIIWINCYFAFDSDCPYGGYKMSGFGRDCGLESLHNYLQVKSV 404
G++ N + P+GG K SG GR+ + YL+ K +
Sbjct: 454 EYGMVGHNTGLISNEVAPFGGVKQSGLGREGSKYGIEEYLETKYI 498
|
| >3ros_A NAD-dependent aldehyde dehydrogenase; nysgrc, PSI-biology, structural genomics, NEW YORK structura genomics research consortium; 1.88A {Lactobacillus acidophilus} Length = 484 | Back alignment and structure |
|---|
Score = 416 bits (1073), Expect = e-143
Identities = 112/406 (27%), Positives = 186/406 (45%), Gaps = 3/406 (0%)
Query: 1 MLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMS 60
+ A+ ++EH + LA + L+ GKL S +K ++ + YYA ++ S
Sbjct: 54 LHDIANALKEHEDELAKMMTLEMGKLLSESK-EEVELCVSICNYYADHGPEMLKPTKLNS 112
Query: 61 RALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHL 120
Y L++ GV+ PWNFP +P G +++K A P A A +
Sbjct: 113 DLGNAYYLKQSTGVIMACEPWNFPLYQVIRVFAPNFIVGNPILLKHAHNVPGSAALTAKI 172
Query: 121 AKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSL 180
K AG P+G L + IA I V+ TGS G V +AA NLK ++
Sbjct: 173 IKRAGAPEGSLINLYPSYDQLADIIA-DPRIQGVALTGSERGGSAVAEAAG-KNLKKSTM 230
Query: 181 ELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAK 240
ELGG ++ DD D ++ +N G++C +S R+ V++ YDE +L
Sbjct: 231 ELGGNDAFIVLDDADPQVLRNVLNDARTYNDGQVCTSSKRIIVEKSRYDEVLHELKNVFS 290
Query: 241 AWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIGKKGYYIEPTIFT 300
GDP + P +K +++ + ++ GA + I KG + PTI T
Sbjct: 291 NLKAGDPLEADTTLPPMNSEKAKEKLEAQVKEAIDAGAKVFYQYPEIDSKGAFFRPTILT 350
Query: 301 NVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSIR 360
++ +D + E+FGP+ + + AI+ AN++ YGL + ++ D++ A VS I
Sbjct: 351 DIAKDNPVFDKEVFGPIAEVFVVEDDNAAIQLANDSSYGLGSSVIGSDIDRAKKVSAQIE 410
Query: 361 AGIIWINCYFAFDSDCPYGGYKMSGFGRDCGLESLHNYLQVKSVVT 406
G+ IN + + P+GG K SG+GR+ L ++ V+
Sbjct: 411 TGMTVINGRWITSGELPFGGIKKSGYGRELSGLGLMAFVNEHLVID 456
|
| >3rh9_A Succinate-semialdehyde dehydrogenase (NAD(P)(+)); structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.63A {Marinobacter aquaeolei} Length = 506 | Back alignment and structure |
|---|
Score = 417 bits (1075), Expect = e-143
Identities = 133/406 (32%), Positives = 219/406 (53%), Gaps = 4/406 (0%)
Query: 1 MLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMS 60
+ D ++E+ E + + ++ GK A+ G++ AA Y A + +
Sbjct: 77 LEDIRDGLKENREEIGRILCMEHGKPWKEAQ-GEVDYAAGFFDYCAKHISALDSHTIPEK 135
Query: 61 RA-LQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAH 119
P+GV G I+PWNFP M K+S ALAAGC ++KPA +TPL + F
Sbjct: 136 PKDCTWTVHYRPVGVTGLIVPWNFPIGMIAKKLSAALAAGCPSVIKPASETPLTMIAFFS 195
Query: 120 LAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVS 179
+ +PDG++N+V G G + H D+ +SFTGST+VGR+++ A +K ++
Sbjct: 196 VMDKLDLPDGMVNLVMGKASVIGKVLCEHKDVPMLSFTGSTEVGRKLIVDTA-EQVKKLA 254
Query: 180 LELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKA 239
LELGG +P ++FDD D+ AAD + G+ CV ++R++V E + D F +KL E+
Sbjct: 255 LELGGNAPFIVFDDADLEAAADNLIANKFRGGGQTCVCANRIFVHEKVADAFGQKLAERV 314
Query: 240 KAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIGK-KGYYIEPTI 298
VGD + + GP ++K+ FD++ +++ +GA+L+ G +P G + PT+
Sbjct: 315 NKMTVGDGMNDGIDIGPLINKQGFDKVKRHLQDALDKGASLVAGKQPAELGDGLFFPPTV 374
Query: 299 FTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRS 358
V +M + E FGP++ + F+T EE I + N+T +GLA+ + T D A V+
Sbjct: 375 VQGVDREMCCYQEETFGPLVPMALFRTEEEVIDAGNDTEFGLASYVFTADAERAQRVAAG 434
Query: 359 IRAGIIWINCYFAFDSDCPYGGYKMSGFGRDCGLESLHNYLQVKSV 404
+R G + N + P+GG K SG GR+ GLE L +++ ++V
Sbjct: 435 LRFGHVGWNTGTGPTPEAPFGGMKASGIGREGGLEGLFEFVEAQTV 480
|
| >3etf_A Putative succinate-semialdehyde dehydrogenase; center for ST genomics of infectious diseases, oxidoreductase, csgid; 1.85A {Salmonella typhimurium} PDB: 3efv_A Length = 462 | Back alignment and structure |
|---|
Score = 414 bits (1068), Expect = e-143
Identities = 124/405 (30%), Positives = 183/405 (45%), Gaps = 3/405 (0%)
Query: 1 MLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMS 60
+ + HAE +A + GK A+ ++ +A +YA + +
Sbjct: 57 LRDIGQALRAHAEEMAQCITREMGKPIKQAR-AEVTKSAALCDWYAEHGPAMLNPEPTLV 115
Query: 61 RALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHL 120
Q P+GV+ I+PWNFP P L AG + ++K A A A +
Sbjct: 116 ENQQAVIEYRPLGVILAIMPWNFPLWQVLRGAVPILLAGNSYLLKHAPNVTGCAQMIARI 175
Query: 121 AKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSL 180
AG P GV V I I V+ TGS G + A + LK L
Sbjct: 176 LAEAGTPAGVYGWVNANNEGVSQMIN-DPRIAAVTVTGSVRAGAAIGAQAG-AALKKCVL 233
Query: 181 ELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAK 240
ELGG P ++ +D D+ A A+ G N G++C A+ R V+EGI F + V A
Sbjct: 234 ELGGSDPFIVLNDADLELAVKAAVAGRYQNTGQVCAAAKRFIVEEGIAQAFTDRFVAAAA 293
Query: 241 AWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIGKKGYYIEPTIFT 300
A +GDP GP D + ++ EGA LL GG+ I +G Y T+
Sbjct: 294 ALKMGDPLVEENDLGPMARFDLRDELHQQVQASVAEGARLLLGGEKIAGEGNYYAATVLA 353
Query: 301 NVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSIR 360
+VT DM + E+FGPV A+ K A+ AN++ +GL+A I T D +A ++ +
Sbjct: 354 DVTPDMTAFRQELFGPVAAITVAKDAAHALALANDSEFGLSATIFTADDTLAAEMAARLE 413
Query: 361 AGIIWINCYFAFDSDCPYGGYKMSGFGRDCGLESLHNYLQVKSVV 405
G ++IN Y A D+ +GG K SGFGR+ LH + V++V
Sbjct: 414 CGGVFINGYSASDARVAFGGVKKSGFGRELSHFGLHEFCNVQTVW 458
|
| >2w8n_A Succinate-semialdehyde dehydrogenase, mitochondrial; mitochondrion, oxidoreductase, transit peptide, disease mutation, SSA, NAD, ssadh; 2.00A {Homo sapiens} PDB: 2w8o_A 2w8p_A 2w8q_A 2w8r_A* Length = 487 | Back alignment and structure |
|---|
Score = 410 bits (1057), Expect = e-141
Identities = 151/409 (36%), Positives = 231/409 (56%), Gaps = 7/409 (1%)
Query: 1 MLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMS 60
+ K+ +L+ ++ + LA + ++GK A G+I +A L +++ A +++G+++
Sbjct: 76 LRKWYNLMIQNKDDLARIITAESGKPLKEAH-GEILYSAFFLEWFSEEARRVYGDIIHTP 134
Query: 61 RA-LQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAH 119
+ L++PIGV I PWNFP+ M KV ALAAGCT++VKPAE TP AL A
Sbjct: 135 AKDRRALVLKQPIGVAAVITPWNFPSAMITRKVGAALAAGCTVVVKPAEDTPFSALALAE 194
Query: 120 LAKLAGVPDGVLNVVPGFGPTA---GAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLK 176
LA AG+P GV NV+P A G AI + + K+SFTGST G+ ++ AA +++K
Sbjct: 195 LASQAGIPSGVYNVIPCSRKNAKEVGEAICTDPLVSKISFTGSTTTGKILLHHAA-NSVK 253
Query: 177 PVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLV 236
VS+ELGG +P ++FD +V+ A A+ N G+ CV S++ VQ GI+D F K
Sbjct: 254 RVSMELGGLAPFIVFDSANVDQAVAGAMASKFRNTGQTCVCSNQFLVQRGIHDAFVKAFA 313
Query: 237 EKAKAW-VVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIGKKGYYIE 295
E K VG+ F+ QGP +++K +++ + +GAT++TGGK + E
Sbjct: 314 EAMKKNLRVGNGFEEGTTQGPLINEKAVEKVEKQVNDAVSKGATVVTGGKRHQLGKNFFE 373
Query: 296 PTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTV 355
PT+ NVT+DML E FGP+ ++KF T EEAI AN GLA ++D V
Sbjct: 374 PTLLCNVTQDMLCTHEETFGPLAPVIKFDTEEEAIAIANAADVGLAGYFYSQDPAQIWRV 433
Query: 356 SRSIRAGIIWINCYFAFDSDCPYGGYKMSGFGRDCGLESLHNYLQVKSV 404
+ + G++ +N +CP+GG K SG GR+ + YL++K V
Sbjct: 434 AEQLEVGMVGVNEGLISSVECPFGGVKQSGLGREGSKYGIDEYLELKYV 482
|
| >1ez0_A ALDH, aldehyde dehydrogenase; nucleotide binding domain, NADP+, oxidoreductase; HET: NAP; 2.10A {Vibrio harveyi} SCOP: c.82.1.1 PDB: 1eyy_A* Length = 510 | Back alignment and structure |
|---|
Score = 373 bits (959), Expect = e-126
Identities = 83/436 (19%), Positives = 145/436 (33%), Gaps = 46/436 (10%)
Query: 1 MLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMS 60
+ A +E ++ + L+ G+I AN LR +A + +
Sbjct: 58 LRTIASELEARSDDIIARAHLETALPEVRLT-GEIARTANQLRLFADVVNSGSYHQAILD 116
Query: 61 RALQG---------YTLREPIGVVGHIIPWNFP--TTMFFMKVSPALAAGCTMIVKPAEQ 109
+ +G V NFP + + ALAAGC +IVK
Sbjct: 117 TPNPTRAPLPKPDIRRQQIALGPVAVFGASNFPLAFSAAGGDTASALAAGCPVIVKGHTA 176
Query: 110 TPLIALYFAHLAKLA----GVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQ 165
P + A + A +P + ++ G G A+ SH +I V FTGS GR
Sbjct: 177 HPGTSQIVAECIEQALKQEQLPQAIFTLLQGNQRALGQALVSHPEIKAVGFTGSVGGGRA 236
Query: 166 VMQAAA-TSNLKPVSLELGGKSPLLIFDDVDVNTA--ADMALLGILFNKGEICVASSRVY 222
+ A P ELG +P IF A AD + + G+ C V+
Sbjct: 237 LFNLAHERPEPIPFYGELGAINPTFIFPSAMRAKADLADQFVASMTMGCGQFCTKPGVVF 296
Query: 223 VQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLT 282
+ +E A++ + P+ P + + + G +G +
Sbjct: 297 ALNTPETQ---AFIETAQS--LIRQQSPSTLLTPGIRDSYQSQ---VVSRGSDDGIDVTF 348
Query: 283 GGKPIGKKGYYIEPTIFTNVTEDML---IAKNEIFGPVMALMKFKTVEEAIKSANNTRYG 339
+ +F +E+ + EIFGP ++ + V + + +
Sbjct: 349 SQAE----SPCVASALFVTSSENWRKHPAWEEEIFGPQSLIVVCENVADMLSLSEMLAGS 404
Query: 340 LAAGIMT--KDLNVANTVSRSI--RAGIIWINCYFAFDSDC-------PYGGYKMSGFGR 388
L A I +D + + + AG + N + PY S
Sbjct: 405 LTATIHATEEDYPQVSQLIPRLEEIAGRLVFNGWPTGVEVGYAMVHGGPYPASTHSA-ST 463
Query: 389 DCGLESLHNYLQVKSV 404
G E++H +L+ +
Sbjct: 464 SVGAEAIHRWLRPVAY 479
|
| >3haz_A Proline dehydrogenase; proline utilization A, PUTA, flavoenzyme, 1-pyrroline-5-carboxylate dehydrogenase, oxidoreductase; HET: FAD NAD; 2.10A {Bradyrhizobium japonicum usda 110} Length = 1001 | Back alignment and structure |
|---|
Score = 352 bits (904), Expect = e-112
Identities = 118/413 (28%), Positives = 193/413 (46%), Gaps = 16/413 (3%)
Query: 1 MLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMS 60
+ + A L+E + L + GK A + ++ AA+ RYYA K+ G M
Sbjct: 578 LEQAAHLLESRSAHFIALLQREGGKTLDDA-LSELREAADFCRYYAAQGRKLFGSETAMP 636
Query: 61 RAL--QGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFA 118
GV I PWNFP +F +V+ AL AG +++ KPAEQTP IA
Sbjct: 637 GPTGESNALTMRGRGVFVAISPWNFPLAIFLGQVTAALMAGNSVVAKPAEQTPRIAREAV 696
Query: 119 HLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSN--LK 176
L AG+P L +V G G GAA+ +H DI V FTGST+V R + +A A + +
Sbjct: 697 ALLHEAGIPKSALYLVTGDGR-IGAALTAHPDIAGVVFTGSTEVARSINRALAAKDGPIV 755
Query: 177 PVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLV 236
P+ E GG + ++ AD + + G+ C A ++VQE + D + +
Sbjct: 756 PLIAETGGINAMIADATALPEQVADDVVTSAFRSAGQRCSALRLLFVQEDVADRMIEMVA 815
Query: 237 EKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIGKKGYYIEP 296
A+ +GDP D A GP +D + R+ ++I K E G P +G ++ P
Sbjct: 816 GAARELKIGDPSDVATHVGPVIDVEAKQRLDAHIARMKTEARLHFAGPAP---EGCFVAP 872
Query: 297 TIFTNVTEDMLIAKNEIFGPVMALMKFK--TVEEAIKSANNTRYGLAAGIMTKDLNVANT 354
IF + E+FGP++ +++++ +E +++ T YGL G+ ++ +
Sbjct: 873 HIFELT--EAGQLTEEVFGPILHVVRYRPENLERVLRAIERTGYGLTLGVHSRIDDSIEA 930
Query: 355 VSRSIRAGIIWIN--CYFAFDSDCPYGGYKMSGFG-RDCGLESLHNYLQVKSV 404
+ ++ G I++N A P+GG +SG G + G L + ++V
Sbjct: 931 IIDRVQVGNIYVNRNMIGAVVGVQPFGGNGLSGTGPKAGGPHYLARFATEQTV 983
|
| >3my7_A Alcohol dehydrogenase/acetaldehyde dehydrogenase; ACDH, PSI, MCSG, structural genomics, midwest center for STR genomics; 2.30A {Vibrio parahaemolyticus} Length = 452 | Back alignment and structure |
|---|
Score = 336 bits (863), Expect = e-112
Identities = 80/433 (18%), Positives = 143/433 (33%), Gaps = 39/433 (9%)
Query: 1 MLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMS 60
+ + LA ++G K+ A+ + Y ++ G +L+
Sbjct: 35 FRAASLAANQARIPLAQQAVEESGMGIVEDKVIKNHFASEFI-YNKYKDEQTCG-ILEED 92
Query: 61 RALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHL 120
L T+ EP+G++ I+P PT+ K +L +I P + A L
Sbjct: 93 DNLGTMTIAEPVGIICGIVPTTNPTSTAIFKSLISLKTRNGIIFSPHPRAKNSTNDAAKL 152
Query: 121 ----AKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLK 176
A AG P ++ + A+ H DI + TG + + AA S+ K
Sbjct: 153 VLDAAVAAGAPKDIIGWIDQPSVELSNALMKHDDIALILATGGPGMVK-----AAYSSGK 207
Query: 177 PVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLV 236
P G P++I + D+ A L+ F+ G +C + V V + +YDE +++
Sbjct: 208 PAIGVGAGNVPVVIDETADIKRAVASVLMSKTFDNGVVCASEQAVIVVDEVYDEVKERFA 267
Query: 237 EKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIGKKGYYIEP 296
+ D VR+ +D +I+ E A G + +
Sbjct: 268 SHKAHVLSKTDADK-VRKVLLIDGALNAKIVGQPATAIAEMA-----GVKVPADTKVLIG 321
Query: 297 TIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSA----NNTRYGLAAGIMTKDL--- 349
V+ D A E P + + + E+A+ A G +G+ T
Sbjct: 322 EGLGKVSYDDAFAH-EKLSPTLGMFRADNFEDAVAQAVTMVEIGGIGHTSGLYTNQDVNA 380
Query: 350 NVANTVSRSIRAGIIWINCYFAFD---SDCPYGGYKMSGFGRDCGLE---------SLHN 397
+ ++ I IN + G CG +
Sbjct: 381 DRIRYFGDKMKTARILINIPTTHGGIGDLYNFNVAPSLTLG--CGSWGGNSISENVGPKH 438
Query: 398 YLQVKSVVTPIFN 410
+ K+V N
Sbjct: 439 LINKKTVAKRAEN 451
|
| >3v4c_A Aldehyde dehydrogenase (NADP+); structural genomics, PSI-biology, nysgrc, NEW YORK structura genomics research consortium; HET: PE4; 1.91A {Sinorhizobium meliloti} Length = 528 | Back alignment and structure |
|---|
Score = 318 bits (817), Expect = e-104
Identities = 83/419 (19%), Positives = 134/419 (31%), Gaps = 44/419 (10%)
Query: 1 MLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAA------DKIHG 54
+ AD IE AE + + + + G + G+ LR +A D+
Sbjct: 91 LRAIADEIEARAEAITEIGSQETGLPEARLN-GERGRTTGQLRLFADHIEKGDYLDRRVD 149
Query: 55 EVLKMSRALQG---YTLREPIGVVGHIIPWNFPTTMFFM--KVSPALAAGCTMIVKPAEQ 109
+ + ++ P+G V NFP + ALAAGC ++VK
Sbjct: 150 AAMPERQPAPRQEIRLVQRPVGPVAVFGASNFPLAFSTAGGDTAAALAAGCPVVVKGHSA 209
Query: 110 TPLIALYFAHLA----KLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQ 165
P A + GV GV +++ G G A+ H I V FTGS GR
Sbjct: 210 HPGTGEIVAEAVDAAIRKTGVHPGVFSLIQGGSRDVGHALVQHPHIKAVGFTGSLAGGRA 269
Query: 166 VM-QAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMA---LLGILFNKGEICVASSRV 221
+ AA P ELG +P+ + + A + + G+ C
Sbjct: 270 LFDLCAARPEPIPFFGELGSVNPMFLLPEALKARAETLGQGWAGSLTMGAGQFCTNPGIA 329
Query: 222 YVQEGI-YDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATL 280
V EG D F VE + + + + +F R
Sbjct: 330 VVIEGADADRFTTAAVEALAKVAPQTMLTDGIAKAYRDGQARF---------ATRNAVKP 380
Query: 281 LTGGKPIGKKGYYIEPTIFTNVTEDMLIAKN---EIFGPVMALMKFKTVEEAIKSANNTR 337
L + G P +F L E+FGP+ +++ + E + A +
Sbjct: 381 LLATES---SGRDASPNLFETTGAQFLADHALGEEVFGPLGLVVRVGSPAEMEELARGFQ 437
Query: 338 YGLAAGIMTKDLNVAN----TVSRSIRAGIIWINCYFAFDSDCPY----GGYKMSGFGR 388
L A I ++ +AG + +N + G Y S
Sbjct: 438 GQLTATIHMDAGDLETARRLRPVLERKAGRVLVNGFPTGVEVVDSMVHGGPYPASTNFG 496
|
| >1t90_A MMSDH, probable methylmalonate-semialdehyde dehydrogenase; oxidoreductase, NAD; HET: NAD; 2.50A {Bacillus subtilis} Length = 486 | Back alignment and structure |
|---|
Score = 297 bits (762), Expect = 7e-97
Identities = 144/419 (34%), Positives = 213/419 (50%), Gaps = 24/419 (5%)
Query: 1 MLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLK-M 59
+ F L+ +H E LA L ++ GK A G++ + + AGA + G+ L +
Sbjct: 71 LFNFQQLLSQHKEELAHLITIENGKNTKEAL-GEVGRGIENVEFAAGAPSLMMGDSLASI 129
Query: 60 SRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAH 119
+ ++ R PIGVVG I P+NFP + A+A G T I+KP+E+TPL+
Sbjct: 130 ATDVEAANYRYPIGVVGGIAPFNFPMMVPCWMFPMAIALGNTFILKPSERTPLLTEKLVE 189
Query: 120 LAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVS 179
L + AG+P GV NVV G I H +I +SF GS VG V + NLK V
Sbjct: 190 LFEKAGLPKGVFNVVYG-AHDVVNGILEHPEIKAISFVGSKPVGEYV-YKKGSENLKRVQ 247
Query: 180 LELGGKSPLLIFDDVDVNTAADMALLGILF-NKGEICVASSRVYVQEGIYDEFEKKLVEK 238
G K+ ++ +D ++ ++G F + GE C+A + V V+EGI DEF KL EK
Sbjct: 248 SLTGAKNHTIVLNDANLEDTVT-NIVGAAFGSAGERCMACAVVTVEEGIADEFMAKLQEK 306
Query: 239 AKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIG-KKGYYIEPT 297
+G+ D V GP + + R LSYIE G EGA L+ G+ GY++ PT
Sbjct: 307 VADIKIGNGLDDGVFLGPVIREDNKKRTLSYIEKGLEEGARLVCDGRENVSDDGYFVGPT 366
Query: 298 IFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVSR 357
IF NVT +M I K+EIF PV+++++ K ++EAI+ AN + + A + T + N
Sbjct: 367 IFDNVTTEMTIWKDEIFAPVLSVIRVKNLKEAIEIANKSEFANGACLFTSNSNAIRYFRE 426
Query: 358 SIRAGIIWIN-------CYFAFDSDCPYGGYKMSGFGRD---CGLESLHNYLQVKSVVT 406
+I AG++ IN +F F G+K S FG G +S+ Y + K V
Sbjct: 427 NIDAGMLGINLGVPAPMAFFPF------SGWKSSFFG-TLHANGKDSVDFYTRKKVVTA 478
|
| >4e4g_A Methylmalonate-semialdehyde dehydrogenase; structural genomics, protein structure INI nysgrc, PSI-biology; 2.90A {Sinorhizobium meliloti} Length = 521 | Back alignment and structure |
|---|
Score = 289 bits (743), Expect = 1e-93
Identities = 135/423 (31%), Positives = 209/423 (49%), Gaps = 28/423 (6%)
Query: 1 MLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLK-M 59
+KF L+ ++ LA + + + GK AK GDI + G E +
Sbjct: 92 FMKFVQLLNDNMNELAEMLSREHGKTIDDAK-GDIVRGLEVCEFVIGIPHLQKSEFTEGA 150
Query: 60 SRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAH 119
+ Y++R+P+G+ I P+NFP + +PA+A G I+KP+E+ P + + A
Sbjct: 151 GPGIDMYSIRQPVGIGAGITPFNFPGMIPMWMFAPAIACGNAFILKPSERDPSVPIRLAE 210
Query: 120 LAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVS 179
L AG+P G+LNVV G A AI +H DI VSF GST + R V A N K
Sbjct: 211 LMIEAGLPAGILNVVNG-DKGAVDAILTHPDIAAVSFVGSTPIARYV-YGTAAMNGKRAQ 268
Query: 180 LELGGKSPLLIFDDVDVNTAADMALLGILF-NKGEICVA-SSRVYVQEGIYDEFEKKLVE 237
G K+ ++I D D++ AA+ AL+G + + GE C+A S V V E + KLV
Sbjct: 269 CFGGAKNHMIIMPDADLDQAAN-ALIGAGYGSAGERCMAISVAVPVGEETANRLIDKLVP 327
Query: 238 KAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGK----PIGKKGYY 293
++ +G D GP V K+ RI S I+ G +GA L+ G+ + G++
Sbjct: 328 MVESLRIGPYTDEKADMGPVVTKEAEQRIRSLIDSGIEQGAKLVVDGRDFKLQGYENGHF 387
Query: 294 IEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVAN 353
I +F +VT DM I K EIFGPV+++++ + EEA+ YG I T+D + A
Sbjct: 388 IGGCLFDDVTPDMDIYKTEIFGPVLSVVRARNYEEALSLPMKHEYGNGVAIYTRDGDAAR 447
Query: 354 TVSRSIRAGIIWIN-------CYFAFDSDCPYGGYKMSGFGRD---CGLESLHNYLQVKS 403
+ I G++ +N Y +F GG+K S FG D G +S+ + + K+
Sbjct: 448 DFASRINIGMVGVNVPIPVPLAYHSF------GGWKSSSFG-DLNQHGTDSIKFWTRTKT 500
Query: 404 VVT 406
+ +
Sbjct: 501 ITS 503
|
| >3k9d_A LMO1179 protein, aldehyde dehydrogenase; structural genomics, PSI-2, protein initiative; 2.00A {Listeria monocytogenes} Length = 464 | Back alignment and structure |
|---|
Score = 278 bits (714), Expect = 5e-90
Identities = 72/442 (16%), Positives = 138/442 (31%), Gaps = 58/442 (13%)
Query: 3 KFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGE-VLKMSR 61
AD E LA + + G K+ A+ ++ + +LK
Sbjct: 42 AIADAGYGAREKLAKMAHEETGFGIWQDKVIKNVFAS---KHVYNYIKDMKTIGMLKEDN 98
Query: 62 ALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHL- 120
+ + P+GVV +IP PT+ K ++ AG +++ P L +
Sbjct: 99 EKKVMEVAVPLGVVAGLIPSTNPTSTVIYKTLISIKAGNSIVFSPHPNALKAILETVRII 158
Query: 121 ---AKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKP 177
A+ AG P G ++ + + H D + TG + + + S+ P
Sbjct: 159 SEAAEKAGCPKGAISCMTVPTIQGTDQLMKHKDTAVILATGGSAMVKAAY-----SSGTP 213
Query: 178 VSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVE 237
G P I ++ A L F+ G IC + V V+ + + +
Sbjct: 214 AIGVGPGNGPAFIERSANIPRAVKHILDSKTFDNGTICASEQSVVVERVNKEAVIAEFRK 273
Query: 238 KAKAWVVGD--------PFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIGK 289
+ ++ P P + K I + A +L +
Sbjct: 274 QGAHFLSDAEAVQLGKFILRPNGSMNPAIVGKSVQHIANLAGLTVPADARVLIAEE---- 329
Query: 290 KGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRY----GLAAGIM 345
T V + ++ E P++A +T +EA + + + Y G I
Sbjct: 330 ----------TKVGAKIPYSR-EKLAPILAFYTAETWQEACELSMDILYHEGAGHTLIIH 378
Query: 346 TKDLNVANTVSRSIRAGIIWIN-------------CYFAFDSDCPYGGYKMSGFGRDCGL 392
++D + + + +N A C G S + G
Sbjct: 379 SEDKEIIREFALKKPVSRLLVNTPGALGGIGATTNLVPALTLGC--GAVGGSSSSDNIGP 436
Query: 393 ESLHNYLQVKSVVTPIFNSPWL 414
E N ++ + T + +
Sbjct: 437 E---NLFNIRRIATGVLELEDI 455
|
| >4e3x_A Delta-1-pyrroline-5-carboxylate dehydrogenase, mitochondrial; amino acid metabolism, proline inhibition, oxidoreductase; HET: 16P PGE; 1.24A {Mus musculus} PDB: 3v9k_A* 3v9l_A* 3v9j_A* 3v9g_A 3v9h_A 3v9i_A Length = 563 | Back alignment and structure |
|---|
Score = 259 bits (665), Expect = 2e-81
Identities = 101/407 (24%), Positives = 173/407 (42%), Gaps = 29/407 (7%)
Query: 1 MLKFADLIE-EHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEV-LK 58
LK AD++ + + GK A++ + R+ A A ++ GE +
Sbjct: 128 FLKAADMLSGPRRAEVLAKTMVGQGKTVIQAEIDAAAELIDFFRFNAKFAVELEGEQPIS 187
Query: 59 MSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFA 118
+ + R G V I P+NF + G ++ KP++ L +
Sbjct: 188 VPPSTNHTVYRGLEGFVAAISPFNFTAIGGNL-AGAPALMGNVVLWKPSDTAMLASYAVY 246
Query: 119 HLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATS----- 173
+ + AG+P ++ VP GPT G + S + ++FTGS + + + A +
Sbjct: 247 RILREAGLPPNIIQFVPADGPTFGDTVTSSEHLCGINFTGSVPTFKHLWRQVAQNLDRFR 306
Query: 174 NLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEK 233
++ E GGK+ + DV++ L G+ C A SR+YV + ++ + +
Sbjct: 307 TFPRLAGECGGKNFHFVHSSADVDSVVSGTLRSAFEYGGQKCSACSRLYVPKSLWPQIKG 366
Query: 234 KLVEKAKAWVVGDPF-DPAVRQGPQVDKKQFDRILSYIEHGKREG-ATLLTGGKPIGKKG 291
+L+E+ VGDP D +D K F RI ++EH + ++L GG+ G
Sbjct: 367 RLLEEHSRIKVGDPAEDFGTFFSAVIDAKAFARIKKWLEHARSSPSLSILAGGQCNESVG 426
Query: 292 YYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFK--TVEEAIKSANN-TRYGLAAGIMTKD 348
YY+EP I + I K EIFGPV+ + + E +K ++ T YGL + +D
Sbjct: 427 YYVEPCIIESKDPQEPIMKEEIFGPVLTVYVYPDDKYRETLKLVDSTTSYGLTGAVFAQD 486
Query: 349 LNVANTVSRSIR--AGIIWINCYFAFDSDC--------PYGGYKMSG 385
+ +R +R AG +IN P+GG + SG
Sbjct: 487 KAIVQEATRMLRNAAGNFYIND------KSTGSVVGQQPFGGARASG 527
|
| >3sza_A Aldehyde dehydrogenase, dimeric NADP-preferring; ALDH, rossmann fold, oxidoreductase; 1.48A {Homo sapiens} PDB: 3szb_A* 1ad3_A* Length = 469 | Back alignment and structure |
|---|
Score = 226 bits (578), Expect = 1e-69
Identities = 108/412 (26%), Positives = 173/412 (41%), Gaps = 57/412 (13%)
Query: 3 KFADLIEEHAEVLAVLEAL--DAGKLHSWAKMGDIPGAANTLRYYAGAADKIHG----EV 56
LI+E + ++ AL D K A ++ + Y K+ E
Sbjct: 48 ALQRLIQEQEQ--ELVGALAADLHKNEWNAYYEEVVYVLEEIEY---MIQKLPEWAADEP 102
Query: 57 LKMSRALQG---YTLREPIGVVGHIIPWNFPTTMFFMKVSP---ALAAGCTMIVKPAEQT 110
++ + Q Y EP+GVV I WN+P F + + P A+AAG +++KP+E +
Sbjct: 103 VEKTPQTQQDELYIHSEPLGVVLVIGTWNYP---FNLTIQPMVGAIAAGNAVVLKPSELS 159
Query: 111 P--------LIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDV 162
+I Y D V+ G G + D + +TGST V
Sbjct: 160 ENMASLLATIIPQYLD--------KDLY-PVING-GVPETTELLKE-RFDHILYTGSTGV 208
Query: 163 GRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVY 222
G+ +M AAA +L PV+LELGGKSP + + D++ A G N G+ CVA +
Sbjct: 209 GKIIMTAAA-KHLTPVTLELGGKSPCYVDKNCDLDVACRRIAWGKFMNSGQTCVAPDYIL 267
Query: 223 VQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQ----VDKKQFDRILSYIEHGKREGA 278
I ++ +KL + K + D ++ + + F R++ IE K
Sbjct: 268 CDPSIQNQIVEKLKKSLKEFYGEDA-----KKSRDYGRIISARHFQRVMGLIEGQK---- 318
Query: 279 TLLTGGKPIGKKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRY 338
+ GG YI PTI T+V + + EIFGPV+ ++ +++EEAI+ N
Sbjct: 319 -VAYGGT-GDAATRYIAPTILTDVDPQSPVMQEEIFGPVLPIVCVRSLEEAIQFINQREK 376
Query: 339 GLAAGIMTKDLNVANTVSRSIRAGIIWIN-CYFAF-DSDCPYGGYKMSGFGR 388
LA + + + V + +G + N P+GG SG G
Sbjct: 377 PLALYMFSSNDKVIKKMIAETSSGGVAANDVIVHITLHSLPFGGVGNSGMGS 428
|
| >3lns_A Benzaldehyde dehydrogenase; oxidoreductase, NADP+, class 3 aldehyde dehyd adduct, covalent catalysis, mandelate racemase pathway; HET: ZBZ NAP; 2.50A {Pseudomonas putida} PDB: 3lv1_A* Length = 457 | Back alignment and structure |
|---|
Score = 205 bits (523), Expect = 1e-61
Identities = 107/412 (25%), Positives = 181/412 (43%), Gaps = 58/412 (14%)
Query: 3 KFADLIEEHAEVLAVLEAL--DAGKLHSWAKMGDIPGAANTLRYYAGAADKIH------- 53
+ + + + E A+ AL D GK + +I + + + A +
Sbjct: 58 RLKEAVINNKE--ALYSALAEDLGKPKDVVDLAEIGAVLHEIDF---ALAHLDEWVAPVS 112
Query: 54 ---GEVLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSP---ALAAGCTMIVKPA 107
+++ S Y ++EP GV I P+N+P + ++P A+ G T I+KP+
Sbjct: 113 VPSPDIIAPSEC---YVVQEPYGVTYIIGPFNYP---VNLTLTPLIGAIIGGNTCIIKPS 166
Query: 108 EQTP--------LIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGS 159
E TP +IA F + V+ G G + + S D + FTGS
Sbjct: 167 ETTPETSAVIEKIIAEAF---------APEYVAVIQG-GRDENSHLLSL-PFDFIFFTGS 215
Query: 160 TDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASS 219
+VG+ VMQAAA +L PV LELGGK PL++ D D++ + + G N G+ +A
Sbjct: 216 PNVGKVVMQAAA-KHLTPVVLELGGKCPLIVLPDADLDQTVNQLMFGKFINSGQTXIAPD 274
Query: 220 RVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGAT 279
+YV + D ++LVE+ K + + V ++Q R++S +E + +
Sbjct: 275 YLYVHYSVKDALLERLVERVKTELPEINSTGKL-----VTERQVQRLVSLLEATQGQVLV 329
Query: 280 LLTGGKPIGKKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTR-Y 338
G + T+ V + + E+FGP++ +++F +V AI N
Sbjct: 330 ----GSQADVSKRALSATVVDGVEWNDPLMSEELFGPILPVLEFDSVRTAIDQVNKHHPK 385
Query: 339 GLAAGIMTKDLNVANTVSRSIRAGIIWIN--CYFAFDSDCPYGGYKMSGFGR 388
LA + KD++VA + I++G +N AF P+GG SG G
Sbjct: 386 PLAVYVFGKDMDVAKGIINQIQSGDAQVNGVMLHAFSPYLPFGGIGASGMGE 437
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 52.5 bits (125), Expect = 2e-07
Identities = 59/435 (13%), Positives = 114/435 (26%), Gaps = 134/435 (30%)
Query: 45 YAGAADKIHGEVLKMSRALQGY-TLREPIGVVGHII-PWNFPTTMFFMKVSPALAAGCTM 102
Y I E + S + Y R+ + + +N ++K+ AL +
Sbjct: 91 YKFLMSPIKTEQRQPSMMTRMYIEQRDRLYNDNQVFAKYNVSRLQPYLKLRQAL-----L 145
Query: 103 IVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPT--AGAAIASHMDIDKVSFT--- 157
++PA + + GVL G G T A S+ K+ F
Sbjct: 146 ELRPA---KNVLID------------GVL----GSGKTWVALDVCLSYKVQCKMDFKIFW 186
Query: 158 ---GSTDVGRQVMQAAAT--SNLKPVSLELGGKSP------------------------- 187
+ + V++ + P S
Sbjct: 187 LNLKNCNSPETVLEMLQKLLYQIDPNWTSRSDHSSNIKLRIHSIQAELRRLLKSKPYENC 246
Query: 188 LLIFDDV-DVNTAADMALLG--ILFNKGEICVASS------RVYVQEGIYDEFEKKLVEK 238
LL+ +V + L IL V + V+
Sbjct: 247 LLVLLNVQNAKAWNAFN-LSCKILLTTRFKQVTDFLSAATTTHISLDHHSMTLTPDEVKS 305
Query: 239 --AKAWVVGDPFD---------P--------AVRQGP-------QVDKKQFDRIL-SYIE 271
K ++ P D P ++R G V+ + I+ S +
Sbjct: 306 LLLK-YLDCRPQDLPREVLTTNPRRLSIIAESIRDGLATWDNWKHVNCDKLTTIIESSLN 364
Query: 272 HGKREGATLLTGGKPIGKKGYYIEPTIF---TNVTEDMLIA--KNEIFGPVMALM-KFKT 325
L +P + + ++F ++ +L + I VM ++ K
Sbjct: 365 V-------L----EPAEYRKMFDRLSVFPPSAHIPTILLSLIWFDVIKSDVMVVVNKLHK 413
Query: 326 VEEAIKSANNTRYGLAAGIMTKDLNVANTVS--RSIRAGIIWINCYFAFDSDCPYGGYKM 383
K + + + + + + N + RSI ++ Y +
Sbjct: 414 YSLVEKQPKESTISIPSIYLELKVKLENEYALHRSI------VDHYNIPKTFDSD----- 462
Query: 384 SGFGRDCGLESLHNY 398
D L Y
Sbjct: 463 -----DLIPPYLDQY 472
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 44.1 bits (103), Expect = 8e-05
Identities = 44/243 (18%), Positives = 76/243 (31%), Gaps = 83/243 (34%)
Query: 148 HMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGI 207
HMD + TG + ++ V + D+ D DM I
Sbjct: 6 HMDFE----TGEHQYQYK--------DILSVFEDA-------FVDNFDCKDVQDM-PKSI 45
Query: 208 LFNK--GEICVAS---SRVYV--------QEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQ 254
L + I ++ S QE + +F ++++ +++ P RQ
Sbjct: 46 LSKEEIDHIIMSKDAVSGTLRLFWTLLSKQEEMVQKFVEEVLRINYKFLM-SPIKTEQRQ 104
Query: 255 GPQVDKKQFDRILSYIEHGKREGATLLTGGKPIGKKGYYIEPTIFTNVT--EDMLIAKNE 312
P + + YIE R L + K NV+ + L +
Sbjct: 105 -PSMMTR------MYIEQRDR----LYNDNQVFAKY----------NVSRLQPYLKLRQ- 142
Query: 313 IFGPVMALMKFKTVEEAIKSANN-TRYGLA-AGIMTKDLNVANTVSRSIRA------GII 364
AL++ ++ A N G+ +G K VA V S + I
Sbjct: 143 ------ALLE-------LRPAKNVLIDGVLGSG---KTW-VALDVCLSYKVQCKMDFKIF 185
Query: 365 WIN 367
W+N
Sbjct: 186 WLN 188
|
Structure Templates Detected by HHsearch 
Original result of HHsearch against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 414 | |||
| 2wme_A | 490 | BADH, betaine aldehyde dehydrogenase; aldehyde oxi | 100.0 | |
| 3ed6_A | 520 | Betaine aldehyde dehydrogenase; structural genomic | 100.0 | |
| 3rh9_A | 506 | Succinate-semialdehyde dehydrogenase (NAD(P)(+)); | 100.0 | |
| 3u4j_A | 528 | NAD-dependent aldehyde dehydrogenase; PSI-biology, | 100.0 | |
| 3ros_A | 484 | NAD-dependent aldehyde dehydrogenase; nysgrc, PSI- | 100.0 | |
| 3ifg_A | 484 | Succinate-semialdehyde dehydrogenase (NADP+); niai | 100.0 | |
| 1bxs_A | 501 | Aldehyde dehydrogenase; retinal, class 1, tetramer | 100.0 | |
| 2o2p_A | 517 | Formyltetrahydrofolate dehydrogenase; aldehyde deh | 100.0 | |
| 3iwj_A | 503 | Putative aminoaldehyde dehydrogenase; rossmann fol | 100.0 | |
| 1o04_A | 500 | Aldehyde dehydrogenase, mitochondrial precursor; A | 100.0 | |
| 4f3x_A | 498 | Putative aldehyde dehydrogenase; structural genomi | 100.0 | |
| 3ek1_A | 504 | Aldehyde dehydrogenase; ssgcid, oxidoreductase, st | 100.0 | |
| 3k2w_A | 497 | Betaine-aldehyde dehydrogenase; structural genomic | 100.0 | |
| 3b4w_A | 495 | Aldehyde dehydrogenase; RV0223C-NAD complex, struc | 100.0 | |
| 2d4e_A | 515 | 5-carboxymethyl-2-hydroxymuconate semialdehyde deh | 100.0 | |
| 1a4s_A | 503 | ALDH, betaine aldehyde dehydrogenase; oxidoreducta | 100.0 | |
| 3qan_A | 538 | 1-pyrroline-5-carboxylate dehydrogenase 1; proline | 100.0 | |
| 3jz4_A | 481 | Succinate-semialdehyde dehydrogenase [NADP+]; tetr | 100.0 | |
| 3prl_A | 505 | NADP-dependent glyceraldehyde-3-phosphate dehydro; | 100.0 | |
| 3r31_A | 517 | BADH, betaine aldehyde dehydrogenase; structural g | 100.0 | |
| 2ve5_A | 490 | BADH, betaine aldehyde dehydrogenase; aldehyde oxi | 100.0 | |
| 1wnd_A | 495 | Putative betaine aldehyde dehydrogenase; NADH, flu | 100.0 | |
| 2imp_A | 479 | Lactaldehyde dehydrogenase; protein-lactate-NADH t | 100.0 | |
| 3i44_A | 497 | Aldehyde dehydrogenase; oxidoreductase, structural | 100.0 | |
| 4e4g_A | 521 | Methylmalonate-semialdehyde dehydrogenase; structu | 100.0 | |
| 3pqa_A | 486 | Lactaldehyde dehydrogenase; structural genomics, p | 100.0 | |
| 3etf_A | 462 | Putative succinate-semialdehyde dehydrogenase; cen | 100.0 | |
| 2w8n_A | 487 | Succinate-semialdehyde dehydrogenase, mitochondria | 100.0 | |
| 3r64_A | 508 | NAD dependent benzaldehyde dehydrogenase; structur | 100.0 | |
| 1uxt_A | 501 | Glyceraldehyde-3-phosphate dehydrogenase (NADP+); | 100.0 | |
| 1euh_A | 475 | NADP dependent non phosphorylating glyceraldehyde- | 100.0 | |
| 2j6l_A | 500 | Aldehyde dehydrogenase family 7 member A1; NAD, re | 100.0 | |
| 4dng_A | 485 | Uncharacterized aldehyde dehydrogenase ALDY; struc | 100.0 | |
| 1uzb_A | 516 | 1-pyrroline-5-carboxylate dehydrogenase; oxidoredu | 100.0 | |
| 3ty7_A | 478 | Putative aldehyde dehydrogenase SAV2122; structura | 100.0 | |
| 1t90_A | 486 | MMSDH, probable methylmalonate-semialdehyde dehydr | 100.0 | |
| 3sza_A | 469 | Aldehyde dehydrogenase, dimeric NADP-preferring; A | 100.0 | |
| 4h7n_A | 474 | Aldehyde dehydrogenase; structural genomics, PSI-b | 100.0 | |
| 4e3x_A | 563 | Delta-1-pyrroline-5-carboxylate dehydrogenase, mit | 100.0 | |
| 3lns_A | 457 | Benzaldehyde dehydrogenase; oxidoreductase, NADP+, | 100.0 | |
| 3ju8_A | 490 | Succinylglutamic semialdehyde dehydrogenase; alpha | 100.0 | |
| 4f9i_A | 1026 | Proline dehydrogenase/delta-1-pyrroline-5-carboxy | 100.0 | |
| 2y53_A | 534 | Aldehyde dehydrogenase (BOX pathway); oxidoreducta | 100.0 | |
| 3haz_A | 1001 | Proline dehydrogenase; proline utilization A, PUTA | 100.0 | |
| 3v4c_A | 528 | Aldehyde dehydrogenase (NADP+); structural genomic | 100.0 | |
| 1ez0_A | 510 | ALDH, aldehyde dehydrogenase; nucleotide binding d | 100.0 | |
| 3k9d_A | 464 | LMO1179 protein, aldehyde dehydrogenase; structura | 100.0 | |
| 1vlu_A | 468 | Gamma-glutamyl phosphate reductase; YOR323C, struc | 100.0 | |
| 2h5g_A | 463 | Delta 1-pyrroline-5-carboxylate synthetase; dehydr | 100.0 | |
| 4ghk_A | 444 | Gamma-glutamyl phosphate reductase; structural gen | 100.0 | |
| 1o20_A | 427 | Gamma-glutamyl phosphate reductase; TM0293, struct | 100.0 | |
| 3my7_A | 452 | Alcohol dehydrogenase/acetaldehyde dehydrogenase; | 100.0 | |
| 4gic_A | 423 | HDH, histidinol dehydrogenase; protein structure i | 97.71 | |
| 1kae_A | 434 | HDH, histidinol dehydrogenase; L-histidinol dehydr | 97.6 |
| >2wme_A BADH, betaine aldehyde dehydrogenase; aldehyde oxidation, NAD, NADP complex, oxidoreductase; HET: NAP CSO; 2.10A {Pseudomonas aeruginosa} PDB: 2wox_A* 3zqa_A* 2xdr_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.9e-96 Score=745.59 Aligned_cols=410 Identities=43% Similarity=0.743 Sum_probs=391.8
Q ss_pred CHHHHHHHHHhHHHHHHHHHHHcCCChHHHhhccHHHHHHHHHHHHHhhhhhcCceeccccCccccccccCCcEEEEEcC
Q 015031 1 MLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMSRALQGYTLREPIGVVGHIIP 80 (414)
Q Consensus 1 L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p 80 (414)
|+++++.|++|+++|++++++|+|||..++...|+..+++.+++++.++++..+...+...+...+.+++|+|||++|+|
T Consensus 72 L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea~~~~v~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~P 151 (490)
T 2wme_A 72 LRRAVDILRERNDELAALETLDTGKPLAETRSVDIVTGADVLEYYAGLVPAIEGEQIPLRETSFVYTRREPLGVVAGIGA 151 (490)
T ss_dssp HHHHHHHHHHTHHHHHHHHHHHHCCCHHHHTTTHHHHHHHHHHHHHHHGGGCCEEEEEEETTEEEEEEEEECSEEEEECC
T ss_pred HHHHHHHHHHhHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhccccccCccccccCCcceeEEecceeEEEEecc
Confidence 57899999999999999999999999998755679999999999999998887776666666778899999999999999
Q ss_pred CCcChHhhHHHHHHHHhcCCeEEEecCCCChhHHHHHHHHHHHcCCCCCeEEEEcCCchhHHHHHHhCCCcCeEEEeCCH
Q 015031 81 WNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGST 160 (414)
Q Consensus 81 ~n~P~~~~~~~~~~ALaaGN~vv~kps~~~~~~~~~l~~~~~~aglp~g~v~~~~~~~~~~~~~l~~~~~~~~v~~tGs~ 160 (414)
||||+...++++++||++||+||+|||+.+|+++..+++++.++|+|+|++|+++|++.++++.|+.||++|.|.||||+
T Consensus 152 wNfP~~~~~~~~a~ALaaGNtVVlKPse~tp~ta~~l~~l~~eaGlP~gv~~vv~g~g~~~g~~L~~~p~v~~I~FTGS~ 231 (490)
T 2wme_A 152 WNYPVQIALWKSAPALAAGNAMIFKPSEVTPLTALKLAEIYTEAGVPDGVFNVLTGSGREVGQWLTEHPLIEKISFTGGT 231 (490)
T ss_dssp SSSHHHHHHHHHHHHHHTTCEEEEECCTTSCHHHHHHHHHHHHHTCCTTSEEECCSCTTTHHHHHHHCTTCCEEEEESCH
T ss_pred ccCcchhhhhhHHHHHHcCCeEEEECCcCCHHHHHHHHHHHHHhCCCCCcEEEEeCChHHHHHHHHhCCCCCEEEEECCh
Confidence 99999999999999999999999999999999999999999999999999999999888999999999999999999999
Q ss_pred HHHHHHHHHHhhCCCCceeeeCCCCCceeecCCCCHHHHHHHHHHHHhcccCCccccCcEEEEeCccHHHHHHHHHHHHh
Q 015031 161 DVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAK 240 (414)
Q Consensus 161 ~~~~~i~~~~~~~~~~~~~~e~gG~~~~iV~~dadl~~a~~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f~~~l~~~~~ 240 (414)
.+|+++.+.++.+++||+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|+|||++++|+|+++|+++++
T Consensus 232 ~~G~~i~~~~a~~~lk~v~lELGGk~p~iV~~dAdl~~A~~~~~~~~~~n~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~ 311 (490)
T 2wme_A 232 STGKKVMASASSSSLKEVTMELGGKSPLIIFPDADLDRAADIAVMANFFSSGQVCTNGTRVFIHRSQQARFEAKVLERVQ 311 (490)
T ss_dssp HHHHHHHHHHHHHHCCEEEEECCCCCEEEECTTSCHHHHHHHHHHHHHGGGGCCTTCCCEEEEEGGGHHHHHHHHHHHHH
T ss_pred HHHHHHHHhhhccCCceEEEEcCCcCeEEEccCccHHHHHHHHHHHHhccCCCcCCCceeeccchhHHHHHHHHHHHHHH
Confidence 99999987665578899999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccCCCCCCCCCccccCCHHHHHHHHHHHHHhhhcCCeEeeCCcccC----CCCceeeeEEEEeCCCCCcccccccccc
Q 015031 241 AWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIG----KKGYYIEPTIFTNVTEDMLIAKNEIFGP 316 (414)
Q Consensus 241 ~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~----~~g~~~~Ptvl~~~~~~~~~~~~E~fgP 316 (414)
++++|+|.|+++++||+++..+++++.++|++++.+|+++++||.... .+|+|++|||+.+++++|++++||+|||
T Consensus 312 ~l~vGdp~~~~~~~Gpli~~~~~~rv~~~i~~a~~~Ga~v~~gG~~~~~~~~~~G~~~~Ptvl~~v~~~~~i~~eEiFGP 391 (490)
T 2wme_A 312 RIRLGDPQDENTNFGPLVSFPHMESVLGYIESGKAQKARLLCGGERVTDGAFGKGAYVAPTVFTDCRDDMTIVREEIFGP 391 (490)
T ss_dssp TCCBSCTTSTTCCBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCSBCCTTTGGGTTCBCCEEEESCCTTSHHHHSCCCSS
T ss_pred hCcCCCCccccCccCCcCCHHHHHHHHHHHHHHHhcCCEEEECCcccCcccccCCCccCCEEEEcCCCCChhhhccccCC
Confidence 999999999999999999999999999999999999999999998653 3689999999999999999999999999
Q ss_pred eEEEeeeCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHHhccceeEEEECCcCCCCCCCCccCCCCCCCCCcchHHHHH
Q 015031 317 VMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSIRAGIIWINCYFAFDSDCPYGGYKMSGFGRDCGLESLH 396 (414)
Q Consensus 317 vl~v~~~~~~~eai~~~n~~~~gl~~sv~s~d~~~~~~~~~~l~~g~v~vN~~~~~~~~~pfgG~~~sG~g~~~g~~~~~ 396 (414)
|++|++|+|+||||+++|+++|||++||||+|.+.++++++++++|+|+||++....+.+||||+|.||+|+++|.+|++
T Consensus 392 Vl~v~~~~~~deAi~~aN~~~yGL~a~v~t~d~~~a~~~~~~l~aG~v~iN~~~~~~~~~PFGG~k~SG~Gre~G~~gl~ 471 (490)
T 2wme_A 392 VMSILVYDDEDEAIRRANDTEYGLAAGVVTQDLARAHRAIHRLEAGICWINTWGESPAEMPVGGYKQSGVGRENGLTTLA 471 (490)
T ss_dssp EEEEEEESCHHHHHHHHHCSSCCSEEEEECSBHHHHHHHHHHSCCSEEEESCCSCCCTTSCBCCSGGGEESCBSHHHHHH
T ss_pred EEEEEEeCCHHHHHHHHhcCCCCCeEEEEcCCHHHHHHHHHHCCeeEEEEeCCCCCCCCCCcccccccccCchhHHHHHH
Confidence 99999999999999999999999999999999999999999999999999998777788999999999999999999999
Q ss_pred hhhcccEEEEeCCC
Q 015031 397 NYLQVKSVVTPIFN 410 (414)
Q Consensus 397 ~~~~~k~i~~~~~~ 410 (414)
+||+.|+|+++++.
T Consensus 472 ~ft~~K~v~i~~g~ 485 (490)
T 2wme_A 472 HYTRIKSVQVELGD 485 (490)
T ss_dssp TTEEEEEEEEECSC
T ss_pred HhhceeEEEEECCC
Confidence 99999999998763
|
| >3ed6_A Betaine aldehyde dehydrogenase; structural genomics, infecti deseases, NAD, oxidoreductase, PSI; 1.70A {Staphylococcus aureus} PDB: 3fg0_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.2e-93 Score=727.58 Aligned_cols=412 Identities=40% Similarity=0.726 Sum_probs=391.5
Q ss_pred CHHHHHHHHHhHHHHHHHHHHHcCCChHHHhhccHHHHHHHHHHHHHhhhhhcCceeccc-cCccccccccCCcEEEEEc
Q 015031 1 MLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMS-RALQGYTLREPIGVVGHII 79 (414)
Q Consensus 1 L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~-~~~~~~~~~~P~Gvv~~i~ 79 (414)
|+++++.|++|+++|++++++|+|||..++ ..|+..+++.+++++.++++..+...+.. .+...+++++|+|||++|+
T Consensus 100 L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea-~~ev~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~~P~GVV~~I~ 178 (520)
T 3ed6_A 100 VRAIADKIKEHREALARLETLDTGKTLEES-YADMDDIHNVFMYFAGLADKDGGEMIDSPIPDTESKIVKEPVGVVTQIT 178 (520)
T ss_dssp HHHHHHHHHHTHHHHHHHHHHHHCCCHHHH-HHHHHHHHHHHHHHHHHTTSCCEEEECCSSTTEEEEEEEEECCEEEEEC
T ss_pred HHHHHHHHHHhHHHHHHHHHHHhCCCHHHH-HHHHHHHHHHHHHHHHHHHHhcCeecccCCCCCcccccccCccEEEEEC
Confidence 578999999999999999999999999976 46999999999999999887766544433 4556789999999999999
Q ss_pred CCCcChHhhHHHHHHHHhcCCeEEEecCCCChhHHHHHHHHHHHcCCCCCeEEEEcCCchhHHHHHHhCCCcCeEEEeCC
Q 015031 80 PWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGS 159 (414)
Q Consensus 80 p~n~P~~~~~~~~~~ALaaGN~vv~kps~~~~~~~~~l~~~~~~aglp~g~v~~~~~~~~~~~~~l~~~~~~~~v~~tGs 159 (414)
|||||+...++++++||++||+||+|||+.+|+++..+++++.++|+|+|++|++++++.++++.|+.||++|.|.||||
T Consensus 179 PwN~P~~~~~~~~apALaaGNtVVlKPs~~tp~t~~~l~~l~~eaGlP~gvvnvv~g~~~~~g~~L~~~p~vd~V~FTGS 258 (520)
T 3ed6_A 179 PWNYPLLQASWKIAPALATGCSLVMKPSEITPLTTIRVFELMEEVGFPKGTINLILGAGSEVGDVMSGHKEVDLVSFTGG 258 (520)
T ss_dssp CSSSHHHHHHHHHHHHHHHTCEEEEECCTTCCHHHHHHHHHHHHHCCCTTSEEECCSCCTTHHHHHHHCTTCSEEEEESC
T ss_pred CCccHHHHHHHHHHHHHHcCCEEEEEcCCcchHHHHHHHHHHHHhCCCCCeEEEEeCCChHHHHHHHhCCCcCEEEEECC
Confidence 99999999999999999999999999999999999999999999999999999999988889999999999999999999
Q ss_pred HHHHHHHHHHHhhCCCCceeeeCCCCCceeecCCCCHHHHHHHHHHHHhcccCCccccCcEEEEeCccHHHHHHHHHHHH
Q 015031 160 TDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKA 239 (414)
Q Consensus 160 ~~~~~~i~~~~~~~~~~~~~~e~gG~~~~iV~~dadl~~a~~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f~~~l~~~~ 239 (414)
+.+|+.|.+.++ ++++|+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|++++
T Consensus 259 ~~vG~~i~~~aa-~~l~~v~lELGGk~p~IV~~dADl~~Aa~~i~~~~f~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~ 337 (520)
T 3ed6_A 259 IETGKHIMKNAA-NNVTNIALELGGKNPNIIFDDADFELAVDQALNGGYFHAGQVCSAGSRILVQNSIKDKFEQALIDRV 337 (520)
T ss_dssp HHHHHHHHHHHH-TTTCEEEEECCCCCEEEECTTSCHHHHHHHHHHHHHGGGGTSTTCCCEEEEEHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhh-hcCCCEEEEcCCCCeeEECCCCCHHHHHHHHHHHHHhcCCCCcccCceEEEcHHHHHHHHHHHHHHH
Confidence 999999999988 8899999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hccccCCCCCCCCCccccCCHHHHHHHHHHHHHhhhcCCeEeeCCcccC----CCCceeeeEEEEeCCCCCccccccccc
Q 015031 240 KAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIG----KKGYYIEPTIFTNVTEDMLIAKNEIFG 315 (414)
Q Consensus 240 ~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~----~~g~~~~Ptvl~~~~~~~~~~~~E~fg 315 (414)
+++++|+|.|+++++||+++..+++++++++++++++|+++++||.... ..|+|++|||+.+++++|++++||+||
T Consensus 338 ~~l~vG~p~d~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~v~~gG~~~~~~~~~~g~f~~PTvl~~v~~~~~i~~eEiFG 417 (520)
T 3ed6_A 338 KKIKLGNGFDADTEMGPVISTEHRNKIESYMDVAKAEGATIAVGGKRPDRDDLKDGLFFEPTVITNCDTSMRIVQEEVFG 417 (520)
T ss_dssp TTCCBCCTTSTTCSBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCSCCCCGGGTTTTCCCCEEEESCCTTSHHHHSCCCS
T ss_pred HhccCCCCccCCCcccccCCHHHHHHHHHHHHHHHhCCCEEEeCCCcCccccCCCCceECCeEEecCCCCCccccCceeC
Confidence 9999999999999999999999999999999999999999999998642 479999999999999999999999999
Q ss_pred ceEEEeeeCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHHhccceeEEEECCcCCCCCCCCccCCCCCCCCCcchHHHH
Q 015031 316 PVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSIRAGIIWINCYFAFDSDCPYGGYKMSGFGRDCGLESL 395 (414)
Q Consensus 316 Pvl~v~~~~~~~eai~~~n~~~~gl~~sv~s~d~~~~~~~~~~l~~g~v~vN~~~~~~~~~pfgG~~~sG~g~~~g~~~~ 395 (414)
||++|++|+|+||||+++|+++|||++||||+|.+.++++++++++|+|+||++....+.+||||+|.||+|+++|++|+
T Consensus 418 PVl~v~~~~~~deAi~~aN~~~~GL~a~v~t~d~~~a~~~a~~l~aG~V~iN~~~~~~~~~PfGG~k~SG~Gre~G~~gl 497 (520)
T 3ed6_A 418 PVVTVEGFETEQEAIQLANDSIYGLAGAVFSKDIGKAQRVANKLKLGTVWINDFHPYFAQAPWGGYKQSGIGRELGKEGL 497 (520)
T ss_dssp SEEEEEEESSHHHHHHHHTCSSCCSEEEEECSCHHHHHHHHHHSCCSEEEESCSCCCCTTSCBCCSGGGEESCBSHHHHH
T ss_pred cEEEEEEeCCHHHHHHHHhCCCCCcEEEEECCCHHHHHHHHHHCCcceEEECCCCCCCCCCCcCCcCcCcCCccchHHHH
Confidence 99999999999999999999999999999999999999999999999999999887778999999999999999999999
Q ss_pred HhhhcccEEEEeCC--CCCCC
Q 015031 396 HNYLQVKSVVTPIF--NSPWL 414 (414)
Q Consensus 396 ~~~~~~k~i~~~~~--~~~~~ 414 (414)
++||+.|+|+++.. ..+||
T Consensus 498 ~~~t~~k~v~~~~~~~~~~~~ 518 (520)
T 3ed6_A 498 EEYLVSKHILTNTNPQLVNWF 518 (520)
T ss_dssp HTTEEEEEEEEESSCCCCCCS
T ss_pred HHhhceEEEEEcCCCCccCcc
Confidence 99999999998875 35676
|
| >3rh9_A Succinate-semialdehyde dehydrogenase (NAD(P)(+)); structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.63A {Marinobacter aquaeolei} | Back alignment and structure |
|---|
Probab=100.00 E-value=7.5e-93 Score=722.62 Aligned_cols=406 Identities=33% Similarity=0.612 Sum_probs=387.7
Q ss_pred CHHHHHHHHHhHHHHHHHHHHHcCCChHHHhhccHHHHHHHHHHHHHhhhhhcCceeccccCccccccc-cCCcEEEEEc
Q 015031 1 MLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMSRALQGYTLR-EPIGVVGHII 79 (414)
Q Consensus 1 L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~-~P~Gvv~~i~ 79 (414)
|+++++.|++|+++|++++++|+|||..++. .|+..+++.+++++.++++..+...+...+...+.++ +|+|||++|+
T Consensus 77 L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea~-~ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVV~~I~ 155 (506)
T 3rh9_A 77 LEDIRDGLKENREEIGRILCMEHGKPWKEAQ-GEVDYAAGFFDYCAKHISALDSHTIPEKPKDCTWTVHYRPVGVTGLIV 155 (506)
T ss_dssp HHHHHHHHHHTHHHHHHHHHHHHCCCHHHHH-HHHHHHHHHHHHHHHHGGGGCCEECSCCGGGCEEEEEEEECCSEEEEC
T ss_pred HHHHHHHHHHhHHHHHHHHHHHhCCCHHHHH-HHHHHHHHHHHHHHHHHHHhcCcccccCCCceeeEeecccceEEEEEC
Confidence 5789999999999999999999999999864 8999999999999999988776654443456678888 9999999999
Q ss_pred CCCcChHhhHHHHHHHHhcCCeEEEecCCCChhHHHHHHHHHHHcCCCCCeEEEEcCCchhHHHHHHhCCCcCeEEEeCC
Q 015031 80 PWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGS 159 (414)
Q Consensus 80 p~n~P~~~~~~~~~~ALaaGN~vv~kps~~~~~~~~~l~~~~~~aglp~g~v~~~~~~~~~~~~~l~~~~~~~~v~~tGs 159 (414)
|||||+...++++++||++||+||+|||+.+|.++..+++++.++|+|+|++|+++|++.+.++.|+.||++|.|.||||
T Consensus 156 PwN~P~~~~~~~~a~ALaaGN~VVlKps~~tp~t~~~l~~l~~eaGlP~gvv~vv~g~~~~~g~~L~~~p~vd~I~FTGS 235 (506)
T 3rh9_A 156 PWNFPIGMIAKKLSAALAAGCPSVIKPASETPLTMIAFFSVMDKLDLPDGMVNLVMGKASVIGKVLCEHKDVPMLSFTGS 235 (506)
T ss_dssp CSSSTTHHHHHHHHHHHHHTCCEEEECCTTSCHHHHHHHHHHTTTTCCTTSEEECCSCHHHHHHHHHHCTTCCEEEEESC
T ss_pred CCchHHHHHHHHHHHHHHcCCEEEEEcCCccHHHHHHHHHHHHHhCcChhhEEEEeCCChHHHHHHHhCCCCCEEEEECC
Confidence 99999999999999999999999999999999999999999999999999999999988889999999999999999999
Q ss_pred HHHHHHHHHHHhhCCCCceeeeCCCCCceeecCCCCHHHHHHHHHHHHhcccCCccccCcEEEEeCccHHHHHHHHHHHH
Q 015031 160 TDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKA 239 (414)
Q Consensus 160 ~~~~~~i~~~~~~~~~~~~~~e~gG~~~~iV~~dadl~~a~~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f~~~l~~~~ 239 (414)
+.+|+.|.+.++ ++++|+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||++++|+|+++|++++
T Consensus 236 ~~vG~~i~~~aa-~~l~~v~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~ 314 (506)
T 3rh9_A 236 TEVGRKLIVDTA-EQVKKLALELGGNAPFIVFDDADLEAAADNLIANKFRGGGQTCVCANRIFVHEKVADAFGQKLAERV 314 (506)
T ss_dssp HHHHHHHHHHTT-TTTCEEEEECCCCCEEEECTTSCHHHHHHHHHHHHHGGGGCSSSSCCEEEEETTTHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhh-hcCCceEEecCCCCceEECCCCCHHHHHHHHHHHHHHhCCCCcccCcEEEEcHHHHHHHHHHHHHHH
Confidence 999999999987 8899999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hccccCCCCCCCCCccccCCHHHHHHHHHHHHHhhhcCCeEeeCCcccCC-CCceeeeEEEEeCCCCCcccccccccceE
Q 015031 240 KAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIGK-KGYYIEPTIFTNVTEDMLIAKNEIFGPVM 318 (414)
Q Consensus 240 ~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~~-~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl 318 (414)
+++++|+|.++++++||+++..+++++++++++++++|+++++||...+. .|+|++|||+.+++++|++++||+||||+
T Consensus 315 ~~~~~G~p~~~~~~~Gpli~~~~~~rv~~~i~~a~~~Ga~v~~gG~~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl 394 (506)
T 3rh9_A 315 NKMTVGDGMNDGIDIGPLINKQGFDKVKRHLQDALDKGASLVAGKQPAELGDGLFFPPTVVQGVDREMCCYQEETFGPLV 394 (506)
T ss_dssp HHCCBSCTTSTTCSBCCCSCHHHHHHHHHHHHHHHHTTCEEEESCCGGGCCSSSCCCCEEEECCCTTSHHHHSCCCSSEE
T ss_pred HhccCCCCcccCCcccccCCHHHHHHHHHHHHHHHHCCCEEEecCCcCCCCCCcEECCeEEccCCCCChhhcccccCcEE
Confidence 99999999999999999999999999999999999999999999986444 79999999999999999999999999999
Q ss_pred EEeeeCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHHhccceeEEEECCcCCCCCCCCccCCCCCCCCCcchHHHHHhh
Q 015031 319 ALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSIRAGIIWINCYFAFDSDCPYGGYKMSGFGRDCGLESLHNY 398 (414)
Q Consensus 319 ~v~~~~~~~eai~~~n~~~~gl~~sv~s~d~~~~~~~~~~l~~g~v~vN~~~~~~~~~pfgG~~~sG~g~~~g~~~~~~~ 398 (414)
+|++|+|+||||+++|+++|||++||||+|.+.++++++++++|+|+||++....+.+||||+|.||+|+++|++|+++|
T Consensus 395 ~v~~~~~~deAi~~aN~~~~gLaa~v~t~d~~~a~~~~~~l~aG~V~vN~~~~~~~~~PfGG~k~SG~G~~~G~~gl~~f 474 (506)
T 3rh9_A 395 PMALFRTEEEVIDAGNDTEFGLASYVFTADAERAQRVAAGLRFGHVGWNTGTGPTPEAPFGGMKASGIGREGGLEGLFEF 474 (506)
T ss_dssp EEEEECCHHHHHHHHTCSSCCSEEEEECSCHHHHHHHHHHCCCSEEEESCCCCCCTTSCBCCSGGGEESCBSHHHHHTTT
T ss_pred EEEEeCCHHHHHHHHhCCCCCceEEEEcCCHHHHHHHHHhCCcceEEEcCCCCCCCCCCccCcCcCcCCcCccHHHHHHh
Confidence 99999999999999999999999999999999999999999999999999988788999999999999999999999999
Q ss_pred hcccEEEEeC
Q 015031 399 LQVKSVVTPI 408 (414)
Q Consensus 399 ~~~k~i~~~~ 408 (414)
|+.|+|+++.
T Consensus 475 t~~K~v~~~~ 484 (506)
T 3rh9_A 475 VEAQTVPRGF 484 (506)
T ss_dssp EEEEEEEEC-
T ss_pred cceEEEEEcC
Confidence 9999998765
|
| >3u4j_A NAD-dependent aldehyde dehydrogenase; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, tetramer; 2.00A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=100.00 E-value=8.6e-93 Score=725.63 Aligned_cols=412 Identities=41% Similarity=0.711 Sum_probs=392.6
Q ss_pred CHHHHHHHHHhHHHHHHHHHHHcCCChHHHhhccHHHHHHHHHHHHHhhhhhcCceeccc-cCccccccccCCcEEEEEc
Q 015031 1 MLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMS-RALQGYTLREPIGVVGHII 79 (414)
Q Consensus 1 L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~-~~~~~~~~~~P~Gvv~~i~ 79 (414)
|+++++.|++|+++|++++++|+|||..++ ..|+..+++.++++++++++..+...+.. .+...+.+++|+|||++|+
T Consensus 91 L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea-~~ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVV~~I~ 169 (528)
T 3u4j_A 91 MFKVADLILARQEELALIESLEVGKPIAQA-RGEIGFCADLWSYAAGQARALEGQTHNNIGDDRLGLVLREPVGVVGIIT 169 (528)
T ss_dssp HHHHHHHHHHTHHHHHHHHHHHHCCCHHHH-HHHHHHHHHHHHHHHHHHTTCCEEEECCSCTTEEEEEEEEECCEEEEEC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCCHHHH-HHHHHHHHHHHHHHHHHHHHhcCeeeccCCCCceeEEEeccceEEEEEC
Confidence 578999999999999999999999999986 78999999999999999887766555443 4566889999999999999
Q ss_pred CCCcChHhhHHHHHHHHhcCCeEEEecCCCChhHHHHHHHHHHHcCCCCCeEEEEcCCchhHHHHHHhCCCcCeEEEeCC
Q 015031 80 PWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGS 159 (414)
Q Consensus 80 p~n~P~~~~~~~~~~ALaaGN~vv~kps~~~~~~~~~l~~~~~~aglp~g~v~~~~~~~~~~~~~l~~~~~~~~v~~tGs 159 (414)
|||||+...++++++||++||+||+|||+.+|.++..+++++.++|+|+|++|++++++.++++.|+.||++|.|.||||
T Consensus 170 PwN~P~~~~~~~~a~ALaaGN~VVlKps~~tp~t~~~l~~l~~eaGlP~gvv~vv~g~~~~~g~~L~~~p~vd~I~FTGS 249 (528)
T 3u4j_A 170 PWNFPFIIASERVPWAIGSGCTVVLKPSEFTSGTSIRLAELAREAGIPDGVFNVVTGYGDPAGQVLAEDPNVDMVAFTGS 249 (528)
T ss_dssp CSSSHHHHHHHHHHHHHHTTCEEEEECCTTCCHHHHHHHHHHHHHTCCTTSEEECCCSSTTHHHHHHHCTTCCEEEEESC
T ss_pred CCccHHHHHHHHHHHHHHcCCeEEEEcCCccHHHHHHHHHHHHHhCCCCCeEEEEeCCcHHHHHHHHhCCCcCEEEEeCC
Confidence 99999999999999999999999999999999999999999999999999999999988889999999999999999999
Q ss_pred HHHHHHHHHHHhhCCCCceeeeCCCCCceeecCCCCHHHHHHHHHHHHhcccCCccccCcEEEEeCccHHHHHHHHHHHH
Q 015031 160 TDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKA 239 (414)
Q Consensus 160 ~~~~~~i~~~~~~~~~~~~~~e~gG~~~~iV~~dadl~~a~~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f~~~l~~~~ 239 (414)
+.+|+.|.+.++ ++++|+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||++++|+|+++|++++
T Consensus 250 ~~~G~~i~~~aa-~~lk~v~lELGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~ 328 (528)
T 3u4j_A 250 VRVGTKLGEIAA-RTVKRVGLELGGKGPQIVFADADLDAAADGIAYGVYHNAGQCCISGSRLLVQEGIRDALMERLLDIS 328 (528)
T ss_dssp HHHHHHHHHHHH-TTTCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCCTTCEEEEEEEGGGHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH-hcCCceEEecCCCCeeEECCCCCHHHHHHHHHHHHhhcCCCCCcCCCEEEEechHHHHHHHHHHHHH
Confidence 999999999988 8899999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hccccCCCCCCCCCccccCCHHHHHHHHHHHHHhhhcCCeEeeCCcccCC-CCceeeeEEEEeCCCCCcccccccccceE
Q 015031 240 KAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIGK-KGYYIEPTIFTNVTEDMLIAKNEIFGPVM 318 (414)
Q Consensus 240 ~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~~-~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl 318 (414)
+++++|+|.++++++||+++..+++++.+++++++++|+++++||..... +|+|++|||+.+++++|++++||+||||+
T Consensus 329 ~~~~~G~p~~~~~~~Gpli~~~~~~rv~~~i~~a~~~Ga~v~~gG~~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl 408 (528)
T 3u4j_A 329 RKVAFGDPLNERTKIGAMISEAHAEKVHSYVTAGITSGAELLLGGERIGREAGLYYAPTVFAGVTPDMSIAREEIFGPVL 408 (528)
T ss_dssp HHCCEECTTSTTCSBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCSEECTTTSCEECCEEEESCCTTSHHHHSCCCSSEE
T ss_pred HhhcCCCCCCcCCccCCccCHHHHHHHHHHHHHHHHCCCEEEeCCCcCCCCCCcEecceEEecCCCCCccccceeeccEE
Confidence 99999999999999999999999999999999999999999999987544 79999999999999999999999999999
Q ss_pred EEeeeCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHHhccceeEEEECCcCCCCCCCCccCCCCCCCCCcchHHHHHhh
Q 015031 319 ALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSIRAGIIWINCYFAFDSDCPYGGYKMSGFGRDCGLESLHNY 398 (414)
Q Consensus 319 ~v~~~~~~~eai~~~n~~~~gl~~sv~s~d~~~~~~~~~~l~~g~v~vN~~~~~~~~~pfgG~~~sG~g~~~g~~~~~~~ 398 (414)
+|++|+|.||||+++|+++|||+++|||+|.+.++++++++++|+|+||++....+.+||||+|.||+|+++|++|+++|
T Consensus 409 ~v~~~~~~deAi~~aN~~~~GL~a~v~t~d~~~a~~~~~~l~aG~V~vN~~~~~~~~~PfGG~k~SG~Gr~~G~~gl~~f 488 (528)
T 3u4j_A 409 STLTFKTADEAVALANATEFGLSASVWSTNLETALQTIRRIRAGRCWINSVIDGTPELPIGGYKKSGLGRELGRYGFDEY 488 (528)
T ss_dssp EEEEESSHHHHHHHHHCSSCCSEEEEECSBHHHHHHHHHHSCCSEEEESCCSCCCTTSCBCCSGGGEESCBSTTHHHHHT
T ss_pred EEEEeCCHHHHHHHHhcCCCCcEEEEEcCCHHHHHHHHHhCCeeEEEECCCCCCCCCCCcCCcCcCCCCcCchHHHHHHh
Confidence 99999999999999999999999999999999999999999999999999887788999999999999999999999999
Q ss_pred hcccEEEEeCC-CCCCC
Q 015031 399 LQVKSVVTPIF-NSPWL 414 (414)
Q Consensus 399 ~~~k~i~~~~~-~~~~~ 414 (414)
|+.|+|+++.+ ..+||
T Consensus 489 t~~K~v~~~~~~~~~~~ 505 (528)
T 3u4j_A 489 SQFKGVHVTLGRPAPWF 505 (528)
T ss_dssp EEEEEEEEESSCCCCSC
T ss_pred hceEEEEEeCCCCCCcc
Confidence 99999998764 45665
|
| >3ros_A NAD-dependent aldehyde dehydrogenase; nysgrc, PSI-biology, structural genomics, NEW YORK structura genomics research consortium; 1.88A {Lactobacillus acidophilus} | Back alignment and structure |
|---|
Probab=100.00 E-value=6.4e-93 Score=720.05 Aligned_cols=405 Identities=27% Similarity=0.451 Sum_probs=387.4
Q ss_pred CHHHHHHHHHhHHHHHHHHHHHcCCChHHHhhccHHHHHHHHHHHHHhhhhhcCceeccccCccccccccCCcEEEEEcC
Q 015031 1 MLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMSRALQGYTLREPIGVVGHIIP 80 (414)
Q Consensus 1 L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p 80 (414)
|+++++.|++|+++|++++++|+|||..++. .|+..+++.+++++..+++..+...+...+...+.+++|+|||++|+|
T Consensus 54 L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea~-~ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~P~GVV~~I~P 132 (484)
T 3ros_A 54 LHDIANALKEHEDELAKMMTLEMGKLLSESK-EEVELCVSICNYYADHGPEMLKPTKLNSDLGNAYYLKQSTGVIMACEP 132 (484)
T ss_dssp HHHHHHHHHHTHHHHHHHHHHHHCCCHHHHH-HHHHHHHHHHHHHHHHHHHHTSCEEECCTTSEEEEEEECCCEEEEECC
T ss_pred HHHHHHHHHHhHHHHHHHHHHHhCCCHHHHH-HHHHHHHHHHHHHHHHHHHhcCCeeccCCCceeEEEecCCceEEEECC
Confidence 5789999999999999999999999999764 799999999999999988776664443355678899999999999999
Q ss_pred CCcChHhhHHHHHHHHhcCCeEEEecCCCChhHHHHHHHHHHHcCCCCCeEEEEcCCchhHHHHHHhCCCcCeEEEeCCH
Q 015031 81 WNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGST 160 (414)
Q Consensus 81 ~n~P~~~~~~~~~~ALaaGN~vv~kps~~~~~~~~~l~~~~~~aglp~g~v~~~~~~~~~~~~~l~~~~~~~~v~~tGs~ 160 (414)
||||+...++++++||++||+||+|||+.+|.++..|.+++.++|+|+|++|+++|++.+.++ |+.||++|.|+||||+
T Consensus 133 wN~P~~~~~~~~a~ALaaGN~VVlKps~~tp~t~~~l~~l~~~aGlP~gvv~vv~g~~~~~~~-L~~~p~vd~I~fTGS~ 211 (484)
T 3ros_A 133 WNFPLYQVIRVFAPNFIVGNPILLKHAHNVPGSAALTAKIIKRAGAPEGSLINLYPSYDQLAD-IIADPRIQGVALTGSE 211 (484)
T ss_dssp SSSTTHHHHHHHHHHHHHTCCEEEECCTTCHHHHHHHHHHHHHHTCCTTSEEEECCCHHHHHH-HHTSTTEEEEEEESCH
T ss_pred CchHHHHHHHHHHHHHHcCCEEEEECCCCChHHHHHHHHHHHHhCcCcCeEEEEeCChHHHHH-HHhCCCcCEEEEECCH
Confidence 999999999999999999999999999999999999999999999999999999998777788 9999999999999999
Q ss_pred HHHHHHHHHHhhCCCCceeeeCCCCCceeecCCCCHHHHHHHHHHHHhcccCCccccCcEEEEeCccHHHHHHHHHHHHh
Q 015031 161 DVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAK 240 (414)
Q Consensus 161 ~~~~~i~~~~~~~~~~~~~~e~gG~~~~iV~~dadl~~a~~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f~~~l~~~~~ 240 (414)
.+|+.|.+.++ ++++|+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||++++|+|+++|+++++
T Consensus 212 ~~G~~i~~~aa-~~lk~v~lELGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~ 290 (484)
T 3ros_A 212 RGGSAVAEAAG-KNLKKSTMELGGNDAFIVLDDADPQVLRNVLNDARTYNDGQVCTSSKRIIVEKSRYDEVLHELKNVFS 290 (484)
T ss_dssp HHHHHHHHHHH-HTTCEEEEECCCCCEEEECTTCCHHHHHHHHTTTTTGGGGCCTTSCCEEEEEGGGHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHh-ccCCceEeecCCCCcceeCCCCCHHHHHHHHHHHHhcCCCCCccCCceEEEcHHHHHHHHHHHHHHHH
Confidence 99999999988 78999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccCCCCCCCCCccccCCHHHHHHHHHHHHHhhhcCCeEeeCCcccCCCCceeeeEEEEeCCCCCcccccccccceEEE
Q 015031 241 AWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIGKKGYYIEPTIFTNVTEDMLIAKNEIFGPVMAL 320 (414)
Q Consensus 241 ~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v 320 (414)
++++|+|.++++++||+++..+++++++++++++++|+++++||...+..|+|++|||+.+++++|++++||+||||++|
T Consensus 291 ~~~~G~p~~~~~~~gpli~~~~~~rv~~~i~~a~~~Ga~v~~gG~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v 370 (484)
T 3ros_A 291 NLKAGDPLEADTTLPPMNSEKAKEKLEAQVKEAIDAGAKVFYQYPEIDSKGAFFRPTILTDIAKDNPVFDKEVFGPIAEV 370 (484)
T ss_dssp TCCBSCTTSTTCCBCCCSCHHHHHHHHHHHHHHHHTTCEEEEECCCCCCSSCCCCCEEEECCCTTSTTTTSCCCSSEEEE
T ss_pred hccCCCCCCCCCccCCCCCHHHHHHHHHHHHHHHHcCCeEEecCCcCCCCCceeCCeEeecCCCCCcccccccccceEEE
Confidence 99999999999999999999999999999999999999999999875568999999999999999999999999999999
Q ss_pred eeeCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHHhccceeEEEECCcCCCCCCCCccCCCCCCCCCcchHHHHHhhhc
Q 015031 321 MKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSIRAGIIWINCYFAFDSDCPYGGYKMSGFGRDCGLESLHNYLQ 400 (414)
Q Consensus 321 ~~~~~~~eai~~~n~~~~gl~~sv~s~d~~~~~~~~~~l~~g~v~vN~~~~~~~~~pfgG~~~sG~g~~~g~~~~~~~~~ 400 (414)
++|+|+||||+++|+++|||++||||+|.+.++++++++++|+|+||++....+.+||||+|.||+|+++|++|+++||+
T Consensus 371 ~~~~~~deAi~~aN~~~~GL~a~v~t~d~~~a~~~~~~l~aG~V~vN~~~~~~~~~PfGG~k~SG~Gr~~G~~gl~~ft~ 450 (484)
T 3ros_A 371 FVVEDDNAAIQLANDSSYGLGSSVIGSDIDRAKKVSAQIETGMTVINGRWITSGELPFGGIKKSGYGRELSGLGLMAFVN 450 (484)
T ss_dssp EEESSHHHHHHHHHSSSCCSCEEEECSCHHHHHHHHHHSCSSCCEETSCCCCCTTSCBCCSGGGEESCBSHHHHHTTTCE
T ss_pred EEcCCHHHHHHHHhCCCCCcEEEEECCCHHHHHHHHHhCccceEEECCCCCCCCCCCcCCcCcccCCcCchHHHHHHhhe
Confidence 99999999999999999999999999999999999999999999999987778899999999999999999999999999
Q ss_pred ccEEEEeC
Q 015031 401 VKSVVTPI 408 (414)
Q Consensus 401 ~k~i~~~~ 408 (414)
.|+|+++.
T Consensus 451 ~K~v~~~~ 458 (484)
T 3ros_A 451 EHLVIDVT 458 (484)
T ss_dssp EEEEEECG
T ss_pred eEEEEECC
Confidence 99998865
|
| >3ifg_A Succinate-semialdehyde dehydrogenase (NADP+); niaid,.infectious disease, ssgcid, seattle structural genomi for infectious disease; 2.70A {Burkholderia pseudomallei} PDB: 3ifh_Q | Back alignment and structure |
|---|
Probab=100.00 E-value=5.6e-93 Score=721.04 Aligned_cols=405 Identities=37% Similarity=0.629 Sum_probs=386.5
Q ss_pred CHHHHHHHHHhHHHHHHHHHHHcCCChHHHhhccHHHHHHHHHHHHHhhhhhcCceeccc-cCccccccccCCcEEEEEc
Q 015031 1 MLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMS-RALQGYTLREPIGVVGHII 79 (414)
Q Consensus 1 L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~-~~~~~~~~~~P~Gvv~~i~ 79 (414)
|+++++.|++|+++|++++++|+|||..++ ..|+..+++.+++++.++++..+...+.. .+...+.+++|+|||++|+
T Consensus 78 L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a-~~ev~~~~~~l~~~a~~~~~~~g~~~~~~~~~~~~~~~~~P~GVv~~I~ 156 (484)
T 3ifg_A 78 LRRWFDLVIANSDDLALILTTEQGKPLAEA-KGEIAYAASFIEWFAEEGKRVAGDTLPTPDANKRIVVVKEPIGVCAAIT 156 (484)
T ss_dssp HHHHHHHHHHTHHHHHHHHHHHHCCCHHHH-HHHHHHHHHHHHHHHHHHTTCCEEEECCSSTTEEEEEEEEECSSEEEEC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHcCCCHHHH-HHHHHHHHHHHHHHHHHHHhhcCccccccCCCceeEEEecCCcEEEEEC
Confidence 578999999999999999999999999975 57999999999999998877665544432 4567789999999999999
Q ss_pred CCCcChHhhHHHHHHHHhcCCeEEEecCCCChhHHHHHHHHHHHcCCCCCeEEEEcCCchhHHHHHHhCCCcCeEEEeCC
Q 015031 80 PWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGS 159 (414)
Q Consensus 80 p~n~P~~~~~~~~~~ALaaGN~vv~kps~~~~~~~~~l~~~~~~aglp~g~v~~~~~~~~~~~~~l~~~~~~~~v~~tGs 159 (414)
|||||+...++++++||++||+||+|||+.+|+++..+++++.++|+|+|++|++++++.++++.|+.||++|.|.||||
T Consensus 157 PwN~P~~~~~~~~a~ALaaGN~VVlKps~~tp~t~~~l~~l~~~aGlP~gv~~vv~g~~~~~g~~L~~~p~v~~v~FTGS 236 (484)
T 3ifg_A 157 PWNFPAAMIARKVGPALAAGCPIVVKPAESTPFSALAMAFLAERAGVPKGVLSVVIGDPKAIGTEITSNPIVRKLSFTGS 236 (484)
T ss_dssp CSSSTTHHHHHHHHHHHHHTCCEEEECCTTSCHHHHHHHHHHHHHTCCTTSEEECCBCHHHHHHHHHHCTTCCEEEEESC
T ss_pred CCcChHHHHHHHHHHHHHcCCEEEEECCCCCcHHHHHHHHHHHHhCCCcccEEEEeCCCHHHHHHHHhCCCcCEEEEECC
Confidence 99999999999999999999999999999999999999999999999999999999988889999999999999999999
Q ss_pred HHHHHHHHHHHhhCCCCceeeeCCCCCceeecCCCCHHHHHHHHHHHHhcccCCccccCcEEEEeCccHHHHHHHHHHHH
Q 015031 160 TDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKA 239 (414)
Q Consensus 160 ~~~~~~i~~~~~~~~~~~~~~e~gG~~~~iV~~dadl~~a~~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f~~~l~~~~ 239 (414)
+.+|+.|.+.++ ++++|+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|++++
T Consensus 237 ~~~G~~i~~~aa-~~~k~v~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~ 315 (484)
T 3ifg_A 237 TAVGRLLMAQSA-PTVKKLTLELGGNAPFIVFDDADLDAAVEGAIASKYRNNGQTCVCTNRFFVHERVYDAFADKLAAAV 315 (484)
T ss_dssp HHHHHHHHHHTG-GGTCEEEEECCCCCEEEECTTSCHHHHHHHHHHHHHGGGGCSTTCCCEEEEEGGGHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhh-ccCCceEEecCCCCeEEECCCCCHHHHHHHHHHHHHhcCCCcccCCCeEEEcHHHHHHHHHHHHHHH
Confidence 999999999987 8899999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hccccCCCCCCCCCccccCCHHHHHHHHHHHHHhhhcCCeEeeCCcccCCCCceeeeEEEEeCCCCCcccccccccceEE
Q 015031 240 KAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIGKKGYYIEPTIFTNVTEDMLIAKNEIFGPVMA 319 (414)
Q Consensus 240 ~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~ 319 (414)
+++++|+|.|+++++||+++..+++++++++++++++|+++++||.....+|+|++|||+.+++++|++++||+||||++
T Consensus 316 ~~~~~G~p~~~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~v~~gG~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~ 395 (484)
T 3ifg_A 316 SKLKVGRGTESGATLGPLINEAAVKKVESHIADALAKGASLMTGGKRHALGHGFFEPTVLTGVKPDMDVAKEETFGPLAP 395 (484)
T ss_dssp HTCCBSCTTSTTCCBCCCSSHHHHHHHHHHHHHHHHTTCEEEECCSBCTTCTTCBCCEEEEEECTTSGGGTSCCCSSEEE
T ss_pred HhccCCCCCCCCCCCCCCcCHHHHHHHHHHHHHHHHCCCEEEECCCccCCCCceEcCEEEecCCCCChhhCCeeeCcEEE
Confidence 99999999999999999999999999999999999999999999987555799999999999999999999999999999
Q ss_pred EeeeCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHHhccceeEEEECCcCCCCCCCCccCCCCCCCCCcchHHHHHhhh
Q 015031 320 LMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSIRAGIIWINCYFAFDSDCPYGGYKMSGFGRDCGLESLHNYL 399 (414)
Q Consensus 320 v~~~~~~~eai~~~n~~~~gl~~sv~s~d~~~~~~~~~~l~~g~v~vN~~~~~~~~~pfgG~~~sG~g~~~g~~~~~~~~ 399 (414)
|++|+|.||||+++|+++|||+++|||+|.+.++++++++++|+|+||+.....+.+||||+|.||+|+++|++|+++||
T Consensus 396 v~~~~~~deAi~~aN~~~~GL~a~v~t~d~~~a~~~~~~l~aG~v~iN~~~~~~~~~PfGG~k~SG~Gr~~g~~gl~~~~ 475 (484)
T 3ifg_A 396 LFRFASEEELVRLANDTEFGLAAYLYSRDIGRVWRVAEALEYGMVGINTGLISNEVAPFGGVKQSGLGREGSHYGIDDYV 475 (484)
T ss_dssp EEEECCHHHHHHHHHCSSEESEEEEECCBHHHHHHHHHHCCCSEEEESCSCCCCSSSCBCCEETTEECCBSTTTTTGGGE
T ss_pred EEEeCCHHHHHHHHhCCCCCceEEEECCCHHHHHHHHHhCCcceEEEcCCCCCCCCCCcCCcCcCcCCCCchHHHHHHhh
Confidence 99999999999999999999999999999999999999999999999997767789999999999999999999999999
Q ss_pred cccEEEEe
Q 015031 400 QVKSVVTP 407 (414)
Q Consensus 400 ~~k~i~~~ 407 (414)
+.|+|++.
T Consensus 476 ~~k~v~~~ 483 (484)
T 3ifg_A 476 VIKYLCVA 483 (484)
T ss_dssp EEEEEEEE
T ss_pred ceEEEEEe
Confidence 99999864
|
| >1bxs_A Aldehyde dehydrogenase; retinal, class 1, tetramer, NAD, cytosolic, oxidoreductase; HET: NAD; 2.35A {Ovis aries} SCOP: c.82.1.1 PDB: 1o9j_A* 1bi9_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.9e-92 Score=718.14 Aligned_cols=409 Identities=55% Similarity=0.958 Sum_probs=388.1
Q ss_pred CHHHHHHHHHhHHHHHHHHHHHcCCChHHHhhccHHHHHHHHHHHHHhhhhhcCceeccccCccccccccCCcEEEEEcC
Q 015031 1 MLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMSRALQGYTLREPIGVVGHIIP 80 (414)
Q Consensus 1 L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p 80 (414)
|+++++.|++|+++|++++++|+|||..++...|+..+++.+++++.++++..+...+...+...+.+++|+|||++|+|
T Consensus 89 L~~~a~~l~~~~~ela~~~~~e~Gk~~~e~~~~ev~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~P~GVV~~I~P 168 (501)
T 1bxs_A 89 LNKLADLIERDRLLLATMEAMNGGKLFSNAYLMDLGGCIKTLRYCAGWADKIQGRTIPMDGNFFTYTRSEPVGVCGQIIP 168 (501)
T ss_dssp HHHHHHHHHHTHHHHHHHHHHHHTCCHHHHHHTHHHHHHHHHHHHHHHGGGCCEEEECCSSSEEEEEEEEECCEEEEECC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhCCeeeccCCcceeEEecCCceEEEECC
Confidence 57899999999999999999999999997666899999999999999988776654443344556889999999999999
Q ss_pred CCcChHhhHHHHHHHHhcCCeEEEecCCCChhHHHHHHHHHHHcCCCCCeEEEEcCCchhHHHHHHhCCCcCeEEEeCCH
Q 015031 81 WNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGST 160 (414)
Q Consensus 81 ~n~P~~~~~~~~~~ALaaGN~vv~kps~~~~~~~~~l~~~~~~aglp~g~v~~~~~~~~~~~~~l~~~~~~~~v~~tGs~ 160 (414)
||||+...++++++||++||+||+|||+.+|+++..+++++.++|+|+|++|+++|++.+.++.|+.||++|.|.||||+
T Consensus 169 wN~P~~~~~~~~a~ALaaGN~VVlKps~~tp~t~~~l~~l~~~aGlP~gv~~vv~g~~~~~g~~L~~~~~v~~I~FTGS~ 248 (501)
T 1bxs_A 169 WNFPLLMFLWKIGPALSCGNTVVVKPAEQTPLTALHMGSLIKEAGFPPGVVNIVPGYGPTAGAAISSHMDVDKVAFTGST 248 (501)
T ss_dssp SSSHHHHHHHHHHHHHHTTCEEEEECCTTCCHHHHHHHHHHHHHTCCTTSEEECCSCTTTHHHHHHTCTTCSEEEEESCH
T ss_pred CcchHHHHHHHHHHHHHcCCeeeccCCCccHHHHHHHHHHHHHhCCCcceEEEEecCchHHHHHHHhCCCcCEEEEECCH
Confidence 99999999999999999999999999999999999999999999999999999999888899999999999999999999
Q ss_pred HHHHHHHHHHhhCCCCceeeeCCCCCceeecCCCCHHHHHHHHHHHHhcccCCccccCcEEEEeCccHHHHHHHHHHHHh
Q 015031 161 DVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAK 240 (414)
Q Consensus 161 ~~~~~i~~~~~~~~~~~~~~e~gG~~~~iV~~dadl~~a~~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f~~~l~~~~~ 240 (414)
.+|+.|.+.+++++++|+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||++++|+|+++|+++++
T Consensus 249 ~~G~~i~~~aa~~~l~~v~lELGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~ 328 (501)
T 1bxs_A 249 EVGKLIKEAAGKSNLKRVSLELGGKSPCIVFADADLDNAVEFAHQGVFYHQGQCCIAASRLFVEESIYDEFVRRSVERAK 328 (501)
T ss_dssp HHHHHHHHHHHHTTCCEEEEECCCCCEEEECTTSCHHHHHHHHHHHHHTTTTCCTTCCCEEEEEHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHhhhccCCcEEEecCCcCeEEECCCCCHHHHHHHHHHHHHhcCCCCCCCCCEEEEchhHHHHHHHHHHHHHH
Confidence 99999999876578899999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccCCCCCCCCCccccCCHHHHHHHHHHHHHhhhcCCeEeeCCcccCCCCceeeeEEEEeCCCCCcccccccccceEEE
Q 015031 241 AWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIGKKGYYIEPTIFTNVTEDMLIAKNEIFGPVMAL 320 (414)
Q Consensus 241 ~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v 320 (414)
++++|+|.|+++++||+++..+++++++++++++++|+++++||+.....|+|++|||+.+++++|++++||+||||++|
T Consensus 329 ~~~~G~p~~~~~~~Gpli~~~~~~rv~~~i~~a~~~Ga~~~~gG~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v 408 (501)
T 1bxs_A 329 KYVLGNPLTPGVSQGPQIDKEQYEKILDLIESGKKEGAKLECGGGPWGNKGYFIQPTVFSDVTDDMRIAKEEIFGPVQQI 408 (501)
T ss_dssp CCCBSCTTSTTCCBCCCSCHHHHHHHHHHHHHHHHTTCEECSCCSEECSSSCEECCEEEESCCTTSHHHHSCCCSSEEEE
T ss_pred hcCCCCCcccCCccCCCcCHHHHHHHHHHHHHHHhCCCEEEeCCccCCCCCCeeCCEEEecCCCCCHHHhcccccceEEE
Confidence 99999999999999999999999999999999999999999999865446999999999999999999999999999999
Q ss_pred eeeCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHHhccceeEEEECCcCCCCCCCCccCCCCCCCCCcchHHHHHhhhc
Q 015031 321 MKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSIRAGIIWINCYFAFDSDCPYGGYKMSGFGRDCGLESLHNYLQ 400 (414)
Q Consensus 321 ~~~~~~~eai~~~n~~~~gl~~sv~s~d~~~~~~~~~~l~~g~v~vN~~~~~~~~~pfgG~~~sG~g~~~g~~~~~~~~~ 400 (414)
++|+|+||||+++|+++|||++||||+|.+.++++++++++|+|+||++....+.+||||+|.||+|+++|++|+++|++
T Consensus 409 ~~~~~~deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~V~iN~~~~~~~~~pfGG~k~SG~G~~~G~~~l~~f~~ 488 (501)
T 1bxs_A 409 MKFKSLDDVIKRANNTFYGLSAGIFTNDIDKAITVSSALQSGTVWVNCYSVVSAQCPFGGFKMSGNGRELGEYGFHEYTE 488 (501)
T ss_dssp EEECCHHHHHHHHHCSSCCSEEEEECSBHHHHHHHHHHSCCSEEEESCCCCCCTTSCBCCSGGGEESCBSHHHHHHTTEE
T ss_pred EEeCCHHHHHHHHhcCCCCeeEEEEcCCHHHHHHHHHhcCeeEEEECCCCCCCCCCCCCCcCcCCcCccchHHHHHHhhC
Confidence 99999999999999999999999999999999999999999999999987767889999999999999999999999999
Q ss_pred ccEEEEeCC
Q 015031 401 VKSVVTPIF 409 (414)
Q Consensus 401 ~k~i~~~~~ 409 (414)
.|+|+.++.
T Consensus 489 ~K~v~~~~~ 497 (501)
T 1bxs_A 489 VKTVTIKIS 497 (501)
T ss_dssp EEEEEEECS
T ss_pred eeEEEEccC
Confidence 999988754
|
| >2o2p_A Formyltetrahydrofolate dehydrogenase; aldehyde dehydrogenase, FDH, oxidoreductase; 1.70A {Rattus norvegicus} PDB: 2o2q_A* 2o2r_A* 3rho_A* 3rhm_A* 3rhj_A* 3rhq_A* 3rhp_A* 3rhr_A* 3rhl_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.9e-92 Score=721.40 Aligned_cols=407 Identities=43% Similarity=0.803 Sum_probs=384.6
Q ss_pred CHHHHHHHHHhHHHHHHHHHHHcCCChHHHhhccHHHHHHHHHHHHHhhhhhcCceeccc----cCccccccccCCcEEE
Q 015031 1 MLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMS----RALQGYTLREPIGVVG 76 (414)
Q Consensus 1 L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~----~~~~~~~~~~P~Gvv~ 76 (414)
|+++++.|++|+++|++++++|+|||..++...|+..+++.+++++.++++..+..++.. .+...+.+++|+|||+
T Consensus 104 L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea~~~Ev~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~~~~~P~GVV~ 183 (517)
T 2o2p_A 104 LYRLADVMEQHQEELATIEALDAGAVYTLALKTHVGMSIQTFRYFAGWCDKIQGATIPINQARPNRNLTLTKKEPVGVCG 183 (517)
T ss_dssp HHHHHHHHHHTHHHHHHHHHHHHCCCHHHHHHTTTHHHHHHHHHHHHHGGGCCEEEECCCCCTTSCEEEEEEEEECCEEE
T ss_pred HHHHHHHHHHhHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCccccccccCCCCceEEEEecCCccEE
Confidence 578999999999999999999999999976448999999999999999887666544431 2225688999999999
Q ss_pred EEcCCCcChHhhHHHHHHHHhcCCeEEEecCCCChhHHHHHHHHHHHcCCCCCeEEEEcCCchhHHHHHHhCCCcCeEEE
Q 015031 77 HIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSF 156 (414)
Q Consensus 77 ~i~p~n~P~~~~~~~~~~ALaaGN~vv~kps~~~~~~~~~l~~~~~~aglp~g~v~~~~~~~~~~~~~l~~~~~~~~v~~ 156 (414)
+|+|||||+...++++++||++||+||+|||+.+|+++..+++++.++|+|+|++|+++|++.++++.|+.||++|.|.|
T Consensus 184 ~I~PwN~P~~~~~~~~a~ALaaGNtVVlKps~~tp~ta~~l~~l~~eaGlP~gvv~vv~g~g~~~g~~L~~~~~v~~V~F 263 (517)
T 2o2p_A 184 IVIPWNYPLMMLSWKTAACLAAGNTVVIKPAQVTPLTALKFAELTLKAGIPKGVVNILPGSGSLVGQRLSDHPDVRKIGF 263 (517)
T ss_dssp EECCSSSHHHHHHHHHHHHHHTTCEEEEECCTTCCHHHHHHHHHHHHTTCCTTSEEECCSCHHHHHHHHHHCTTCCEEEE
T ss_pred EECCCcchHHHHHHHHHHHHHcCCEEEEECCCccHHHHHHHHHHHHHhCCCcCeEEEEeCCCHHHHHHHHhCCCCCEEEE
Confidence 99999999999999999999999999999999999999999999999999999999999988889999999999999999
Q ss_pred eCCHHHHHHHHHHHhhCCCCceeeeCCCCCceeecCCCCHHHHHHHHHHHHhcccCCccccCcEEEEeCccHHHHHHHHH
Q 015031 157 TGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLV 236 (414)
Q Consensus 157 tGs~~~~~~i~~~~~~~~~~~~~~e~gG~~~~iV~~dadl~~a~~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f~~~l~ 236 (414)
|||+.+|+.|.+.++.++++|+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|+
T Consensus 264 TGS~~~G~~I~~~aa~~~lk~v~lELGGk~p~IV~~dADl~~Aa~~i~~~~f~n~GQ~C~a~~rv~V~~~i~d~f~~~l~ 343 (517)
T 2o2p_A 264 TGSTEVGKHIMKSCALSNVKKVSLELGGKSPLIIFADCDLNKAVQMGMSSVFFNKGENCIAAGRLFVEESIHNQFVQKVV 343 (517)
T ss_dssp ESCHHHHHHHHHHHHHHTCCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCCTTCEEEEEEEHHHHHHHHHHHH
T ss_pred ECCHHHHHHHHHHhHHhcCCeEEEECCCcCeEEECCCCCHHHHHHHHHHHHHhcCCCCCcCCeEEEEeHHHHHHHHHHHH
Confidence 99999999999987635789999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhccccCCCCCCCCCccccCCHHHHHHHHHHHHHhhhcCCeEeeCCcccCCCCceeeeEEEEeCCCCCcccccccccc
Q 015031 237 EKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIGKKGYYIEPTIFTNVTEDMLIAKNEIFGP 316 (414)
Q Consensus 237 ~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgP 316 (414)
++++++++|+|.|+++++||+++..+++++.+++++++++|+++++||......|+|++|||+.+++++|++++||+|||
T Consensus 344 ~~~~~~~vGdp~~~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~~~~gG~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGP 423 (517)
T 2o2p_A 344 EEVEKMKIGNPLERDTNHGPQNHEAHLRKLVEYCQRGVKEGATLVCGGNQVPRPGFFFQPTVFTDVEDHMYIAKEESFGP 423 (517)
T ss_dssp HHHTTCCBSCTTSTTCCBCCCSSHHHHHHHHHHHHHHHHTTCEEEECCSBCSSSSCCBCCEEEESCCTTSGGGTSCCCSS
T ss_pred HHHHhcCCCCCCCCCCccCCCcCHHHHHHHHHHHHHHHHCCCEEEeccccCCCCCCeECCEEEeCCCCCChhhhcccccc
Confidence 99999999999999999999999999999999999999999999999986544699999999999999999999999999
Q ss_pred eEEEeeeCC--HHHHHHHHhcCCCCceEEEecCCHHHHHHHHhccceeEEEECCcCCCCCCCCccCCCCCCCCCcchHHH
Q 015031 317 VMALMKFKT--VEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSIRAGIIWINCYFAFDSDCPYGGYKMSGFGRDCGLES 394 (414)
Q Consensus 317 vl~v~~~~~--~~eai~~~n~~~~gl~~sv~s~d~~~~~~~~~~l~~g~v~vN~~~~~~~~~pfgG~~~sG~g~~~g~~~ 394 (414)
|++|++|+| +||||+++|+++|||++||||+|.+.++++++++++|+|+||++....+.+||||+|.||+|+++|.++
T Consensus 424 Vl~v~~~~~~~~deAi~~aN~~~~GL~a~v~t~d~~~a~~~~~~l~aG~V~iN~~~~~~~~~PfGG~k~SG~Gr~~G~~~ 503 (517)
T 2o2p_A 424 IMIISRFADGDVDAVLSRANATEFGLASGVFTRDINKALYVSDKLQAGTVFINTYNKTDVAAPFGGFKQSGFGKDLGEAA 503 (517)
T ss_dssp EEEEEEECTTCSHHHHHHHTCSSCCSCCEEECSBHHHHHHHHHHCCSSEEEESCSSCCCTTSCBCCCGGGEECCBSHHHH
T ss_pred EEEEEEcCCCCHHHHHHHHhcCCCCceEEEeCCCHHHHHHHHHhcCEeEEEECCCCCCCCCCCcCCcCcCCcCccChHHH
Confidence 999999999 999999999999999999999999999999999999999999987777899999999999999999999
Q ss_pred HHhhhcccEEEEe
Q 015031 395 LHNYLQVKSVVTP 407 (414)
Q Consensus 395 ~~~~~~~k~i~~~ 407 (414)
+++|+++|+|+.+
T Consensus 504 l~~~~~~k~v~~~ 516 (517)
T 2o2p_A 504 LNEYLRIKTVTFE 516 (517)
T ss_dssp HHTTEEEEEEEEE
T ss_pred HHHhCCceEEEee
Confidence 9999999999875
|
| >3iwj_A Putative aminoaldehyde dehydrogenase; rossmann fold, dimer, betaine aldehyde dehydrogenase, NAD, oxidoreductase; HET: NAD; 2.15A {Pisum sativum} SCOP: c.82.1.0 PDB: 3iwk_A* 4a0m_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.5e-92 Score=720.02 Aligned_cols=412 Identities=45% Similarity=0.781 Sum_probs=388.5
Q ss_pred CHHHHHHHHHhHHHHHHHHHHHcCCChHHHhhccHHHHHHHHHHHHHhhhhhcCce-ec--c-ccCccccccccCCcEEE
Q 015031 1 MLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEV-LK--M-SRALQGYTLREPIGVVG 76 (414)
Q Consensus 1 L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~~~~~~~~~-~~--~-~~~~~~~~~~~P~Gvv~ 76 (414)
|+++++.|++|+++|++++++|+|||..++ ..|+..+++.+++++.++++..+.. .+ . ..+...+++++|+|||+
T Consensus 78 L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea-~~ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~ 156 (503)
T 3iwj_A 78 LRAIAAKVTEKKPELAKLESIDCGKPLDEA-AWDIDDVAGCFEYYADLAEKLDARQKAPVSLPMDTFKSHVLREPIGVVG 156 (503)
T ss_dssp HHHHHHHHHHTHHHHHHHHHHHHCCCHHHH-HHHHHHHHHHHHHHHHHHHHHHHHTTEEECCSCTTEEEEEEEEECCEEE
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCCHHHH-HHHHHHHHHHHHHHHHHHHHhcCCccccccccCCCccceEEEcCCceEE
Confidence 578999999999999999999999999975 5799999999999999887665432 11 1 13456788999999999
Q ss_pred EEcCCCcChHhhHHHHHHHHhcCCeEEEecCCCChhHHHHHHHHHHHcCCCCCeEEEEcCCchhHHHHHHhCCCcCeEEE
Q 015031 77 HIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSF 156 (414)
Q Consensus 77 ~i~p~n~P~~~~~~~~~~ALaaGN~vv~kps~~~~~~~~~l~~~~~~aglp~g~v~~~~~~~~~~~~~l~~~~~~~~v~~ 156 (414)
+|+|||||+...++++++||++||+||+|||+.+|+++..+++++.++|+|+|++|+++|++.+.++.|+.||++|.|.|
T Consensus 157 ~I~PwN~P~~~~~~~~~~ALaaGN~VVlKps~~tp~t~~~l~~l~~~aGlP~gvv~vv~g~~~~~g~~L~~~~~v~~I~F 236 (503)
T 3iwj_A 157 LITPWNYPMLMATWKVAPALAAGCAAILKPSELASLTCLELGEICKEVGLPPGVLNILTGLGPEAGAPLATHPDVDKVAF 236 (503)
T ss_dssp EECCSSSHHHHHHHHHHHHHHTTCEEEEECCTTSCHHHHHHHHHHHHHTCCTTSEEECCSCHHHHTHHHHTCTTCCEEEE
T ss_pred EECCCchHHHHHHHHHHHHHhcCCeEEEECCCcchHHHHHHHHHHHHhCcCcCeEEEEeCCcHHHHHHHhhCCCccEEEE
Confidence 99999999999999999999999999999999999999999999999999999999999988889999999999999999
Q ss_pred eCCHHHHHHHHHHHhhCCCCceeeeCCCCCceeecCCCCHHHHHHHHHHHHhcccCCccccCcEEEEeCccHHHHHHHHH
Q 015031 157 TGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLV 236 (414)
Q Consensus 157 tGs~~~~~~i~~~~~~~~~~~~~~e~gG~~~~iV~~dadl~~a~~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f~~~l~ 236 (414)
|||+.+|+.|.+.++ ++++|+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||++++|+|+++|+
T Consensus 237 TGS~~~G~~i~~~aa-~~l~~v~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~ 315 (503)
T 3iwj_A 237 TGSSATGSKIMTAAA-QLVKPVSLELGGKSPLVVFEDVDLDKAAEWAIFGCFWTNGQICSATSRLILHESIATEFLNRIV 315 (503)
T ss_dssp ESCHHHHHHHHHHHG-GGTCCEEEECCCCEEEEECSSSCHHHHHHHHHHHHTGGGGCCTTCEEEEEEETTTHHHHHHHHH
T ss_pred ECcHHHHHHHHHHHh-cCCCCEEEECCCCCceEEcCCCCHHHHHHHHHHHHHhcCCCCcccCCeeEEcHHHHHHHHHHHH
Confidence 999999999999987 8899999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhccccCCCCCCCCCccccCCHHHHHHHHHHHHHhhhcCCeEeeCCcccC--CCCceeeeEEEEeCCCCCcccccccc
Q 015031 237 EKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIG--KKGYYIEPTIFTNVTEDMLIAKNEIF 314 (414)
Q Consensus 237 ~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~--~~g~~~~Ptvl~~~~~~~~~~~~E~f 314 (414)
++++++++|+|.++++++||++++.+++++.+++++++++|+++++||.... ..|+|++|||+.+++++|++++||+|
T Consensus 316 ~~~~~~~~g~p~~~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~v~~gG~~~~~~~~g~~~~PTvl~~v~~~~~i~~eEiF 395 (503)
T 3iwj_A 316 KWIKNIKISDPLEEGCRLGPVVSEGQYEKILKFVSNAKSEGATILTGGSRPEHLKKGFFIEPTIITDVTTNMQIWREEVF 395 (503)
T ss_dssp HHHHTCCBSCTTSTTCCBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCSCCTTCCSSSCCCCEEEESCCTTSHHHHSCCC
T ss_pred HHHHhccCCCCCCCCCcccCccCHHHHHHHHHHHHHHHHCCCEEEecCCCCccCCCCceeCCeeeecCCCCchhhCceee
Confidence 9999999999999999999999999999999999999999999999998654 47999999999999999999999999
Q ss_pred cceEEEeeeCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHHhccceeEEEECCcCCCCCCCCccCCCCCCCCCcchHHH
Q 015031 315 GPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSIRAGIIWINCYFAFDSDCPYGGYKMSGFGRDCGLES 394 (414)
Q Consensus 315 gPvl~v~~~~~~~eai~~~n~~~~gl~~sv~s~d~~~~~~~~~~l~~g~v~vN~~~~~~~~~pfgG~~~sG~g~~~g~~~ 394 (414)
|||++|++|+|+||||+++|+++|||++||||+|.+.++++++++++|+|+||++....+.+||||+|.||+|+++|.+|
T Consensus 396 GPVl~v~~~~~~deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~v~iN~~~~~~~~~PfGG~k~SG~G~~~G~~g 475 (503)
T 3iwj_A 396 GPVLCVKTFSTEEEAIDLANDTVYGLGAAVISNDLERCERVTKAFKAGIVWVNCSQPCFTQAPWGGVKRSGFGRELGEWG 475 (503)
T ss_dssp SSEEEEEEESSHHHHHHHHTCSSCCSEEEEECSCHHHHHHHHHHCCSSEEEESSSCCCCTTSCBCCSGGGEECCBSHHHH
T ss_pred CceEEEEEeCCHHHHHHHHhCCCCCcEEEEECCCHHHHHHHHHhCCcceEEEcCCCCCCCCCCcCCcCcccCCCcchHHH
Confidence 99999999999999999999999999999999999999999999999999999987777899999999999999999999
Q ss_pred HHhhhcccEEEEeCCC--CCCC
Q 015031 395 LHNYLQVKSVVTPIFN--SPWL 414 (414)
Q Consensus 395 ~~~~~~~k~i~~~~~~--~~~~ 414 (414)
+++|++.|+|+++... ..||
T Consensus 476 ~~~f~~~k~v~~~~~~~~~~~~ 497 (503)
T 3iwj_A 476 LDNYLSVKQVTQYISEEPWGWY 497 (503)
T ss_dssp HHTTEEEEEEEEECCSSCCCCS
T ss_pred HHHhhCeEEEEEeCCCCccccc
Confidence 9999999999987653 3465
|
| >1o04_A Aldehyde dehydrogenase, mitochondrial precursor; ALDH, NAD, NADH, isomerization, oxidoreductase; HET: NAD; 1.42A {Homo sapiens} SCOP: c.82.1.1 PDB: 1nzw_A* 3inl_A* 3n80_A* 1nzz_A* 1o00_A* 1nzx_A* 1o01_A* 1o05_A 1of7_A* 1o02_A* 3inj_A* 3sz9_A* 1zum_A 2onm_A* 2onp_A* 2onn_A 2ono_A* 3n81_A 3n82_A* 3n83_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=2.4e-92 Score=718.57 Aligned_cols=409 Identities=53% Similarity=0.888 Sum_probs=387.6
Q ss_pred CHHHHHHHHHhHHHHHHHHHHHcCCChHHHhhccHHHHHHHHHHHHHhhhhhcCceeccccCccccccccCCcEEEEEcC
Q 015031 1 MLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMSRALQGYTLREPIGVVGHIIP 80 (414)
Q Consensus 1 L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p 80 (414)
|+++++.|++|+++|++++++|+|||..++...|+..+++.++++++++++..+..++...+...+.+++|+|||++|+|
T Consensus 88 L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea~~~ev~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~P~GVv~~I~P 167 (500)
T 1o04_A 88 LNRLADLIERDRTYLAALETLDNGKPYVISYLVDLDMVLKCLRYYAGWADKYHGKTIPIDGDFFSYTRHEPVGVCGQIIP 167 (500)
T ss_dssp HHHHHHHHHHTHHHHHHHHHHHHCCCHHHHHHTHHHHHHHHHHHHHHHTTTCCEEEECCSSSEEEEEEEEECCEEEEECC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhCcceecCCCceEEEEEecCCcEEEECC
Confidence 57899999999999999999999999997666899999999999999887776654443334556889999999999999
Q ss_pred CCcChHhhHHHHHHHHhcCCeEEEecCCCChhHHHHHHHHHHHcCCCCCeEEEEcCCchhHHHHHHhCCCcCeEEEeCCH
Q 015031 81 WNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGST 160 (414)
Q Consensus 81 ~n~P~~~~~~~~~~ALaaGN~vv~kps~~~~~~~~~l~~~~~~aglp~g~v~~~~~~~~~~~~~l~~~~~~~~v~~tGs~ 160 (414)
||||+...++++++||++||+||+|||+.+|+++..|++++.++|+|+|++|+++|++.++++.|+.||++|.|.||||+
T Consensus 168 wN~P~~~~~~~~a~ALaaGN~VVlKps~~tp~t~~~l~~l~~~aGlP~gvv~vv~g~~~~~g~~L~~~p~v~~I~FTGS~ 247 (500)
T 1o04_A 168 WNFPLLMQAWKLGPALATGNVVVMKVAEQTPLTALYVANLIKEAGFPPGVVNIVPGFGPTAGAAIASHEDVDKVAFTGST 247 (500)
T ss_dssp SSSHHHHHHHHHHHHHHTTCEEEEECCTTSCHHHHHHHHHHHHHTCCTTSEEECCBCTTTHHHHHHTCTTCCEEEEESCH
T ss_pred CCchHHHHHHHHHHHHHcCCEEEEECCccChHHHHHHHHHHHHhCCCcCeEEEEecCcHHHHHHHHhCCCcCEEEEECCH
Confidence 99999999999999999999999999999999999999999999999999999999877899999999999999999999
Q ss_pred HHHHHHHHHHhhCCCCceeeeCCCCCceeecCCCCHHHHHHHHHHHHhcccCCccccCcEEEEeCccHHHHHHHHHHHHh
Q 015031 161 DVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAK 240 (414)
Q Consensus 161 ~~~~~i~~~~~~~~~~~~~~e~gG~~~~iV~~dadl~~a~~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f~~~l~~~~~ 240 (414)
.+|+.|.+.+++++++|+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||++++|+|+++|+++++
T Consensus 248 ~~G~~i~~~aa~~~l~pv~lELGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~ 327 (500)
T 1o04_A 248 EIGRVIQVAAGSSNLKRVTLELGGKSPNIIMSDADMDWAVEQAHFALFFNQGQCSCAGSRTFVQEDIYDEFVERSVARAK 327 (500)
T ss_dssp HHHHHHHHHHHHTTCCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCCTTCEEEEEEEHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhhhhhcCceEEEEcCCcCeEEECCCCCHHHHHHHHHHHHhccCCCCCCCCCEEEEehhHHHHHHHHHHHHHH
Confidence 99999999876578999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccCCCCCCCCCccccCCHHHHHHHHHHHHHhhhcCCeEeeCCcccCCCCceeeeEEEEeCCCCCcccccccccceEEE
Q 015031 241 AWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIGKKGYYIEPTIFTNVTEDMLIAKNEIFGPVMAL 320 (414)
Q Consensus 241 ~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v 320 (414)
++++|+|.|+++++||+++..+++++++++++++++|+++++||......|+|++|||+.+++++|++++||+||||++|
T Consensus 328 ~~~~G~p~~~~~~~Gpli~~~~~~rv~~~i~~a~~~Ga~~~~gG~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v 407 (500)
T 1o04_A 328 SRVVGNPFDSKTEQGPQVDETQFKKILGYINTGKQEGAKLLCGGGIAADRGYFIQPTVFGDVQDGMTIAKEEIFGPVMQI 407 (500)
T ss_dssp HCCBCCTTSTTCSBCCCSSHHHHHHHHHHHHHHHHTTCEEEECCSBCCSSSSCBCCEEEESCCTTSHHHHSCCCSSEEEE
T ss_pred hCcCCCcccccCccCcccCHHHHHHHHHHHHHHHhCCCEEEeCCccCCCCCCeeCCEEEeCCCCCChhhhCcccceEEEE
Confidence 99999999999999999999999999999999999999999999865346999999999999999999999999999999
Q ss_pred eeeCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHHhccceeEEEECCcCCCCCCCCccCCCCCCCCCcchHHHHHhhhc
Q 015031 321 MKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSIRAGIIWINCYFAFDSDCPYGGYKMSGFGRDCGLESLHNYLQ 400 (414)
Q Consensus 321 ~~~~~~~eai~~~n~~~~gl~~sv~s~d~~~~~~~~~~l~~g~v~vN~~~~~~~~~pfgG~~~sG~g~~~g~~~~~~~~~ 400 (414)
++|+|+||||+++|+++|||++||||+|.+.++++++++++|+|+||++....+.+||||+|.||+|+++|.+|+++|++
T Consensus 408 ~~~~~~deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~V~iN~~~~~~~~~PfGG~k~SG~G~~~G~~gl~~f~~ 487 (500)
T 1o04_A 408 LKFKTIEEVVGRANNSTYGLAAAVFTKDLDKANYLSQALQAGTVWVNCYDVFGAQSPFGGYKMSGSGRELGEYGLQAYTE 487 (500)
T ss_dssp EEECCHHHHHHHHHCSSCCSEEEEECSBHHHHHHHHHHCCSSEEEESCSSCCCTTSCBCCSGGGEESCBSTGGGGGGGEE
T ss_pred EeeCCHHHHHHHHhcCCCCceEEEECCCHHHHHHHHHhCCeeEEEECCCCCCCCCCCCCCcCCCCCCccchHHHHHHhcc
Confidence 99999999999999999999999999999999999999999999999987767889999999999999999999999999
Q ss_pred ccEEEEeCC
Q 015031 401 VKSVVTPIF 409 (414)
Q Consensus 401 ~k~i~~~~~ 409 (414)
.|+|+.++.
T Consensus 488 ~K~v~~~~~ 496 (500)
T 1o04_A 488 VKTVTVKVP 496 (500)
T ss_dssp EEEEEEECS
T ss_pred eEEEEEecC
Confidence 999988754
|
| >4f3x_A Putative aldehyde dehydrogenase; structural genomics, protein structure initiative, nysgrc, P biology; HET: MSE NAD; 2.01A {Sinorhizobium meliloti} PDB: 4dal_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.3e-92 Score=718.37 Aligned_cols=406 Identities=34% Similarity=0.629 Sum_probs=387.7
Q ss_pred CHHHHHHHHHhHHHHHHHHHHHcCCChHHHhhccHHHHHHHHHHHHHhhhhhcCceecc-ccCccccccccCCcEEEEEc
Q 015031 1 MLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKM-SRALQGYTLREPIGVVGHII 79 (414)
Q Consensus 1 L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~~~~~~~~~~~~-~~~~~~~~~~~P~Gvv~~i~ 79 (414)
|+++++.|++|+++|++++++|+|||..++...|+..+++.+++++.++++..+...+. ..+...+++++|+|||++|+
T Consensus 90 L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea~~~ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~ 169 (498)
T 4f3x_A 90 LLKIADAIEKEADEFAALEALNCGKPINAVKNDELPAIIDCWRFFAGAVRNLHAPAAGEYLPGHTSMIRRDPIGIVGSIA 169 (498)
T ss_dssp HHHHHHHHHHTHHHHHHHHHHHHCCCHHHHHHTHHHHHHHHHHHHHHHTTCCEEECBEEEETTEEEEEEEEECCEEEEEC
T ss_pred HHHHHHHHHHhHHHHHHHHHHHhCCCHHHHhHHHHHHHHHHHHHHHHHHHHhcCccccCCcccccceEEEcCcceEEEEC
Confidence 57899999999999999999999999998646899999999999999988766554432 24567889999999999999
Q ss_pred CCCcChHhhHHHHHHHHhcCCeEEEecCCCChhHHHHHHHHHHHcCCCCCeEEEEcCCchhHHHHHHhCCCcCeEEEeCC
Q 015031 80 PWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGS 159 (414)
Q Consensus 80 p~n~P~~~~~~~~~~ALaaGN~vv~kps~~~~~~~~~l~~~~~~aglp~g~v~~~~~~~~~~~~~l~~~~~~~~v~~tGs 159 (414)
|||||+...++++++||++||+||+|||+.+|+++..+++++.++ +|+|++|++++++.+.++.|+.||++|.|.||||
T Consensus 170 PwN~P~~~~~~~~a~ALaaGNtVVlKPs~~tp~t~~~l~~l~~ea-lP~gv~nvv~g~~~~~g~~L~~~p~v~~V~FTGS 248 (498)
T 4f3x_A 170 PWNYPLMMMAWKLAPAIGGGNTVVFKPSEQTPLTALKLARLIADI-LPEGVVNVITGRGETVGNALINHPKVGMVSITGD 248 (498)
T ss_dssp CSSSHHHHHHHHHHHHHHTTCEEEEECCTTCCHHHHHHHHHHHTT-SCTTSEEECCCCTTTHHHHHHTCTTCCEEEEESC
T ss_pred CCchHHHHHHHHHHHHHHcCCeEEEECCcccHHHHHHHHHHHHHh-CCcCeEEEEeCCchHHHHHHHhCCCcCEEEEECC
Confidence 999999999999999999999999999999999999999999999 9999999999988889999999999999999999
Q ss_pred HHHHHHHHHHHhhCCCCceeeeCCCCCceeecCCCCHHHHHHHHHHHHhcccCCccccCcEEEEeCccHHHHHHHHHHHH
Q 015031 160 TDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKA 239 (414)
Q Consensus 160 ~~~~~~i~~~~~~~~~~~~~~e~gG~~~~iV~~dadl~~a~~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f~~~l~~~~ 239 (414)
+.+|+.|.+.++ ++++|+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|++++
T Consensus 249 ~~~G~~i~~~aa-~~~k~v~lElGGk~p~IV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~ 327 (498)
T 4f3x_A 249 IATGKKVLAAAA-KTVKRTHLELGGKAPVIVYGDADLEAVVNGIRTFGYYNAGQDCTAACRIYAEAGIYEKLVADLTSAV 327 (498)
T ss_dssp HHHHHHHHHHHH-TTTCEEEEECCCCEEEEECTTSCHHHHHHHHHHHTTGGGGCSTTCEEEEEEETTTHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH-hhCCceeecCCCCCcEEECCCCCHHHHHHHHHHHHHhcCCCCccCCceEEecHHHHHHHHHHHHHHH
Confidence 999999999988 8899999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hccccCCCCCCCCCccccCCHHHHHHHHHHHHHhhhcCC-eEeeCCcccCCCCceeeeEEEEeCCCCCcccccccccceE
Q 015031 240 KAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGA-TLLTGGKPIGKKGYYIEPTIFTNVTEDMLIAKNEIFGPVM 318 (414)
Q Consensus 240 ~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ga-~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl 318 (414)
+++++|+|.|+++++||+++..+++++++++++++++|+ ++++||...+.+|+|++|||+.+++++|++++||+||||+
T Consensus 328 ~~~~vG~p~d~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~~v~~gG~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl 407 (498)
T 4f3x_A 328 STIRYNLDDDTENEIGPLISRRQRDRVASFVERAADQKHIEITTGGRTGSDEGFFFQPTVVAGATQEDEIVRREVFGPVV 407 (498)
T ss_dssp TTCCCSCSSGGGCSSCCCSCHHHHHHHHHHHHHHHHSTTCEEEECCSBCCSSSCCBCCEEEESCCTTSHHHHSCCCSSEE
T ss_pred HhcccCCCccccCccccCcCHHHHHHHHHHHHHHHHCCCCEEEECCccCCCCCcEECCEEeecCCCCChhhCCceeCcEE
Confidence 999999999999999999999999999999999999999 9999998755689999999999999999999999999999
Q ss_pred EEeeeCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHHhccceeEEEECCcCCCCCCCCccCCCCCCCCCcchHHHHHhh
Q 015031 319 ALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSIRAGIIWINCYFAFDSDCPYGGYKMSGFGRDCGLESLHNY 398 (414)
Q Consensus 319 ~v~~~~~~~eai~~~n~~~~gl~~sv~s~d~~~~~~~~~~l~~g~v~vN~~~~~~~~~pfgG~~~sG~g~~~g~~~~~~~ 398 (414)
+|++|+|.||||+++|+++|||++||||+|.+.++++++++++|+|+||++....+.+||||+|.||+|+++|.+|+++|
T Consensus 408 ~v~~~~~~deAi~~aN~~~~GL~a~v~t~d~~~a~~~a~~l~aG~V~vN~~~~~~~~~PfGG~k~SG~Gr~~G~~~l~~~ 487 (498)
T 4f3x_A 408 SVTRFTGKDDAVAWANDSDYGLASSVWTKDISKAMRAASRLQYGCTWINTHFMLTNEMPHGGIKQSGYGKDMSVYALEDY 487 (498)
T ss_dssp EEEEECTTSCHHHHHHSSSCCSEEEEECSBHHHHHHHHHHCCSSEEEESCCSCCCTTSCBCCSGGGEECCBSHHHHHHHT
T ss_pred EEEEeCCHHHHHHHHhcCCCCceEEEECCCHHHHHHHHHhCCcceEEEcCCCCCCCCCCcCCcCcCCcCccchHHHHHHh
Confidence 99999999999999999999999999999999999999999999999999887778999999999999999999999999
Q ss_pred hcccEEEEeC
Q 015031 399 LQVKSVVTPI 408 (414)
Q Consensus 399 ~~~k~i~~~~ 408 (414)
|+.|+|+++.
T Consensus 488 t~~k~v~~~~ 497 (498)
T 4f3x_A 488 TAVRHIMINH 497 (498)
T ss_dssp EEEEEEEEEC
T ss_pred hceEEEEEeC
Confidence 9999998764
|
| >3ek1_A Aldehyde dehydrogenase; ssgcid, oxidoreductase, structural genomics; HET: MES; 2.10A {Brucella melitensis biovar ABORTUS2308} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.7e-92 Score=718.21 Aligned_cols=405 Identities=40% Similarity=0.682 Sum_probs=386.1
Q ss_pred CHHHHHHHHHhHHHHHHHHHHHcCCChHHHhhccHHHHHHHHHHHHHhhhhhcCceeccc-cCccccccccCCcEEEEEc
Q 015031 1 MLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMS-RALQGYTLREPIGVVGHII 79 (414)
Q Consensus 1 L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~-~~~~~~~~~~P~Gvv~~i~ 79 (414)
|+++++.|++|+++|++++++|+|||..++ ..|+..+++.+++++.++++..+...+.. .+...+.+++|+|||++|+
T Consensus 98 L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea-~~ev~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~~P~GVV~~I~ 176 (504)
T 3ek1_A 98 LRKWFDLIIANADDIALIMTSEQGKPLAEA-RGEVLYAASFIEWFAEEAKRVYGDTIPAPQNGQRLTVIRQPVGVTAAIT 176 (504)
T ss_dssp HHHHHHHHHHTHHHHHHHHHHHHCCCHHHH-HHHHHHHHHHHHHHHHHHTTCCEEEECCSSTTEEEEEEEEECCEEEEEC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCCHHHH-HHHHHHHHHHHHHHHHHHHHhcCcccccccccccceeeccCceEEEEEC
Confidence 578999999999999999999999999975 56999999999999999877665544332 3566788999999999999
Q ss_pred CCCcChHhhHHHHHHHHhcCCeEEEecCCCChhHHHHHHHHHHHcCCCCCeEEEEcCCchhHHHHHHhCCCcCeEEEeCC
Q 015031 80 PWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGS 159 (414)
Q Consensus 80 p~n~P~~~~~~~~~~ALaaGN~vv~kps~~~~~~~~~l~~~~~~aglp~g~v~~~~~~~~~~~~~l~~~~~~~~v~~tGs 159 (414)
|||||+...++++++||++||+||+|||+.+|+++..+++++.++|+|+|++|++++++.++++.|+.||++|.|.||||
T Consensus 177 PwN~P~~~~~~~~a~ALaaGN~VVlKPs~~tp~t~~~l~~l~~eaGlP~gv~~vv~g~~~~~g~~L~~~p~v~~V~FTGS 256 (504)
T 3ek1_A 177 PWNFPAAMITRKAAPALAAGCTMIVRPADLTPLTALALGVLAEKAGIPAGVLQIVTGKAREIGAELTSNDTVRKLSFTGS 256 (504)
T ss_dssp CSSSTTHHHHHHHHHHHHHTCEEEEECCTTSCHHHHHHHHHHHHTTCCTTTEEECCSCHHHHHHHHHHCTTCCEEEEESC
T ss_pred CCcchHHHHHHHHHHHHHcCCEEEEECCCcChHHHHHHHHHHHHhCCCcccEEEEeCCCHHHHHHHHhCCCcCEEEEECC
Confidence 99999999999999999999999999999999999999999999999999999999988889999999999999999999
Q ss_pred HHHHHHHHHHHhhCCCCceeeeCCCCCceeecCCCCHHHHHHHHHHHHhcccCCccccCcEEEEeCccHHHHHHHHHHHH
Q 015031 160 TDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKA 239 (414)
Q Consensus 160 ~~~~~~i~~~~~~~~~~~~~~e~gG~~~~iV~~dadl~~a~~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f~~~l~~~~ 239 (414)
+.+|+.|.+.++ ++++|+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|++++
T Consensus 257 ~~~G~~i~~~aa-~~lk~v~lELGGk~p~IV~~dADl~~Aa~~i~~~~f~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~ 335 (504)
T 3ek1_A 257 TEVGRLLMAQCA-PTIKRISLELGGNAPFIVFDDADLDAAVDGAMVSKYRNAGQTCVCANRIYVQRGVYDKFAEKLAAKV 335 (504)
T ss_dssp HHHHHHHHHHHG-GGTCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCSTTSEEEEEEEHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhhh-hhcCCeEecCCCCCeeEEcCCCCHHHHHHHHHHHHHhcCCCCCCCCCEEEEehhHHHHHHHHHHHHH
Confidence 999999999987 7899999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hccccCCCCCCCCCccccCCHHHHHHHHHHHHHhhhcCCeEeeCCcccCCCCceeeeEEEEeCCCCCcccccccccceEE
Q 015031 240 KAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIGKKGYYIEPTIFTNVTEDMLIAKNEIFGPVMA 319 (414)
Q Consensus 240 ~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~ 319 (414)
+++++|+|.|+++++||+++..+++++++++++++++|+++++||.. .+|+|++|||+.+++++|++++||+||||++
T Consensus 336 ~~~~~G~p~~~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~v~~gG~~--~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~ 413 (504)
T 3ek1_A 336 KELKVGNGTEPGVVIGPMIEEKAITKVKAHIEDAVSKGAKLITGGKE--LGGLFFEPGILTGVTSDMLVAKEETFGPLAP 413 (504)
T ss_dssp HTCCBSCTTSTTCCBCCCSSHHHHHHHHHHHHHHHHTTCEEEECCCE--EETTEECCEEEEEECTTSGGGTSCCCSSEEE
T ss_pred hhcccCCCccccCccccccCHHHHHHHHHHHHHHHHCCCEEEeCCcc--CCCceECCeEEecCCCcChhhcccccCcEEE
Confidence 99999999999999999999999999999999999999999999986 3689999999999999999999999999999
Q ss_pred EeeeCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHHhccceeEEEECCcCCCCCCCCccCCCCCCCCCcchHHHHHhhh
Q 015031 320 LMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSIRAGIIWINCYFAFDSDCPYGGYKMSGFGRDCGLESLHNYL 399 (414)
Q Consensus 320 v~~~~~~~eai~~~n~~~~gl~~sv~s~d~~~~~~~~~~l~~g~v~vN~~~~~~~~~pfgG~~~sG~g~~~g~~~~~~~~ 399 (414)
|++|+|+||||+++|+++|||++||||+|.+.++++++++++|+|+||+.....+.+||||+|.||+|+++|++|+++|+
T Consensus 414 v~~~~~~deAi~~aN~~~~GL~a~v~t~d~~~a~~~a~~l~aG~V~vN~~~~~~~~~PfGG~k~SG~Gr~~G~~gl~~~t 493 (504)
T 3ek1_A 414 LFAFDTEEEVIAQANDTIFGLAAYFYTENFSRAIRVSEALEYGMVGHNTGLISNEVAPFGGVKQSGLGREGSKYGIEEYL 493 (504)
T ss_dssp EEEECCHHHHHHHHHCSSCCSEEEEECCBHHHHHHHHHHSCCSEEEESCSCCCCSSSCBCCSGGGEESCBSTTTSGGGGE
T ss_pred EEEeCCHHHHHHHHhCCCCCeEEEEEcCCHHHHHHHHHhCCcCeEEECCCCCCCCCCCcCCcCcCcCCCCCcHHHHHHhh
Confidence 99999999999999999999999999999999999999999999999998777789999999999999999999999999
Q ss_pred cccEEEEeCC
Q 015031 400 QVKSVVTPIF 409 (414)
Q Consensus 400 ~~k~i~~~~~ 409 (414)
+.|+|+++++
T Consensus 494 ~~K~v~~~~g 503 (504)
T 3ek1_A 494 ETKYICSAYK 503 (504)
T ss_dssp EEEEEEEECC
T ss_pred ceEEEEEecC
Confidence 9999988754
|
| >3k2w_A Betaine-aldehyde dehydrogenase; structural genomics, PSI-2, protein initiative; 1.90A {Pseudoalteromonas atlantica T6C} | Back alignment and structure |
|---|
Probab=100.00 E-value=6.3e-92 Score=716.10 Aligned_cols=410 Identities=34% Similarity=0.589 Sum_probs=386.6
Q ss_pred CHHHHHHHHHhHHHHHHHHHHHcCCChHHHhhccHHHHHHHHHHHHHhhhhhcCceecc-ccCccccccccCCcEEEEEc
Q 015031 1 MLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKM-SRALQGYTLREPIGVVGHII 79 (414)
Q Consensus 1 L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~~~~~~~~~~~~-~~~~~~~~~~~P~Gvv~~i~ 79 (414)
|+++++.|++|+++|++++++|+|||..++ ..|+..+++.+++++.++++..+...+. ..+...+..++|+|||++|+
T Consensus 78 L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a-~~ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVV~~I~ 156 (497)
T 3k2w_A 78 LRTFANKIRENKHILAPMLVAEQGKLLSVA-EMEVDVTATFIDYGCDNALTIEGDILPSDNQDEKIYIHKVPRGVVVGIT 156 (497)
T ss_dssp HHHHHHHHHTTHHHHHHHHHHHHCCCHHHH-HHHHHHHHHHHHHHHHTTTTCCEEEEECSSTTEEEEEEEEECSEEEEEC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCCHHHH-HHHHHHHHHHHHHHHHHHHHhcCcccccCCCCcceeEEEcCCceEEEEC
Confidence 578999999999999999999999999976 4799999999999999988776654443 24566788999999999999
Q ss_pred CCCcChHhhHHHHHHHHhcCCeEEEecCCCChhHHHHHHHHHHHcCCCCCeEEEEcCCchhHHHHHHhCCCcCeEEEeCC
Q 015031 80 PWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGS 159 (414)
Q Consensus 80 p~n~P~~~~~~~~~~ALaaGN~vv~kps~~~~~~~~~l~~~~~~aglp~g~v~~~~~~~~~~~~~l~~~~~~~~v~~tGs 159 (414)
|||||+...++++++||++||+||+|||+.+|.++..+++++.++|+|+|++|++++++.++++.|+.||++|.|.||||
T Consensus 157 PwN~P~~~~~~~~~~ALaaGN~VVlKps~~tp~t~~~l~~ll~~aGlP~gvv~vv~g~~~~~g~~L~~~p~vd~I~fTGS 236 (497)
T 3k2w_A 157 AWNFPLALAGRKIGPALITGNTMVLKPTQETPLATTELGRIAKEAGLPDGVLNVINGTGSVVGQTLCESPITKMITMTGS 236 (497)
T ss_dssp CSSSHHHHHHHHHHHHHHTTCEEEEECCSSSCHHHHHHHHHHHHTTCCTTSEEECCSCTTTHHHHHHHCSSEEEEEEESC
T ss_pred CCccHHHHHHHHHHHHHHcCCEEEEECCCCChHHHHHHHHHHHHhCcCcCeEEEEeCCchHHHHHHHhCCCcCEEEEECc
Confidence 99999999999999999999999999999999999999999999999999999999988889999999999999999999
Q ss_pred HHHHHHHHHHHhhCCCCceeeeCCCCCceeecCCCCHHHHHHHHHHHHhcccCCccccCcEEEEeCccHHHHHHHHHHHH
Q 015031 160 TDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKA 239 (414)
Q Consensus 160 ~~~~~~i~~~~~~~~~~~~~~e~gG~~~~iV~~dadl~~a~~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f~~~l~~~~ 239 (414)
+.+|+.|.+.++ ++++|+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||++++|+|+++|++++
T Consensus 237 ~~~G~~i~~~aa-~~l~pv~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~ 315 (497)
T 3k2w_A 237 TVAGKQIYKTSA-EYMTPVMLELGGKAPMVVMDDADLDKAAEDALWGRFANCGQVCTCVERLYVHASVYDEFMAKFLPLV 315 (497)
T ss_dssp HHHHHHHHHHHT-TTTCCEEEECCCCEEEEECTTCCHHHHHHHHHHHHHGGGGCSTTSEEEEEEETTTHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhh-hcCCCeEEEcCCCCceEEcCCCCHHHHHHHHHHHHHhCCCCCCcCCcEEEEeHHHHHHHHHHHHHHH
Confidence 999999999987 8899999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hccccCCCCCCCCCccccCCHHHHHHHHHHHHHhhhcCCeEeeCCcc--cCC--CCceeeeEEEEeCCCCCccccccccc
Q 015031 240 KAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKP--IGK--KGYYIEPTIFTNVTEDMLIAKNEIFG 315 (414)
Q Consensus 240 ~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ga~v~~gg~~--~~~--~g~~~~Ptvl~~~~~~~~~~~~E~fg 315 (414)
+++++|+|.++++++||+++..+++++++++++++++|+++++||.. ... +|+|++|||+.+++++|++++||+||
T Consensus 316 ~~~~vg~p~~~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~v~~gG~~~~~~~~~~g~~~~Ptvl~~v~~~~~i~~eEiFG 395 (497)
T 3k2w_A 316 KGLKVGDPMDADSQMGPKCNQREIDNIDHIVHEAIKQGATVATGGKTATVEGFEGGCWYEPTVLVDVKQDNIVVHEETFG 395 (497)
T ss_dssp HTCCBSCTTSTTCSBCCCSCHHHHHHHHHHHHHHHHHHCEEEECCC---------CCCCCCEEEESCCTTSHHHHSCCCS
T ss_pred HhccCCCCCCCCCccccCcCHHHHHHHHHHHHHHHHCCCEEEecCccCCccccCCCceeCCEEEecCCCCcHhhcCCccC
Confidence 99999999999999999999999999999999999999999999973 222 68999999999999999999999999
Q ss_pred ceEEEeeeCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHHhccceeEEEECCcCCCCCCCCccCCCCCCCCCcchHHHH
Q 015031 316 PVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSIRAGIIWINCYFAFDSDCPYGGYKMSGFGRDCGLESL 395 (414)
Q Consensus 316 Pvl~v~~~~~~~eai~~~n~~~~gl~~sv~s~d~~~~~~~~~~l~~g~v~vN~~~~~~~~~pfgG~~~sG~g~~~g~~~~ 395 (414)
||++|++|+|+||||+++|+++|||++||||+|.+.++++++++++|+|+||++....+.+||||+|.||+|+++|++|+
T Consensus 396 PVl~v~~~~~~deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~v~vN~~~~~~~~~PfGG~k~SG~G~~~G~~gl 475 (497)
T 3k2w_A 396 PILPIVKVSSMEQAIEFCNDSIYGLSAYVHTQSFANINQAISDLEVGEVYINRGMGEQHQGFHNGWKQSGFGGEDGKFGL 475 (497)
T ss_dssp SEEEEEEESCHHHHHHHHTCSSEESEEEEECSBHHHHHHHHHHCCSSEEEESCCSCCCTTSCBCCEETSEESCBSHHHHH
T ss_pred cEEEEEEeCCHHHHHHHHhcCCCCcEEEEEcCCHHHHHHHHHhCCeeEEEEcCCCCCCCCCCcCCcCCCcCCccchHHHH
Confidence 99999999999999999999999999999999999999999999999999999988788999999999999999999999
Q ss_pred HhhhcccEEEEeCCCCC
Q 015031 396 HNYLQVKSVVTPIFNSP 412 (414)
Q Consensus 396 ~~~~~~k~i~~~~~~~~ 412 (414)
++||++|+|+.++.+.+
T Consensus 476 ~~ft~~k~v~~~~~~~~ 492 (497)
T 3k2w_A 476 EQYLEKKTVYINEAEGH 492 (497)
T ss_dssp HTTEEEEEEEEECCC--
T ss_pred HHhcceEEEEEEccccc
Confidence 99999999999887643
|
| >3b4w_A Aldehyde dehydrogenase; RV0223C-NAD complex, structural genomics, PSI-2, protein STR initiative; HET: NAD GOL; 1.80A {Mycobacterium tuberculosis} | Back alignment and structure |
|---|
Probab=100.00 E-value=7.4e-92 Score=714.69 Aligned_cols=406 Identities=40% Similarity=0.682 Sum_probs=385.5
Q ss_pred CHHHHHHHHHhHHHHHHHHHHHcCCChHHHhhccHHHHHHHHHHHHHhhhhhcCceeccccCccccccccCCcEEEEEcC
Q 015031 1 MLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMSRALQGYTLREPIGVVGHIIP 80 (414)
Q Consensus 1 L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p 80 (414)
|+++++.|++|+++|++++++|+|||..++...|+..+++.+++++.++++..+..++.+.+...+..++|+|||++|+|
T Consensus 76 L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea~~~Ev~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~P~GVv~~I~P 155 (495)
T 3b4w_A 76 IAAAVKMLAERKDLFTKLLAAETGQPPTIIETMHWMGSMGAMNYFAGAADKVTWTETRTGSYGQSIVSREPVGVVGAIVA 155 (495)
T ss_dssp HHHHHHHHHHTHHHHHHHHHHHHCCCHHHHHHTTTHHHHHHHHHHHTCGGGSCSEEEEEETTEEEEEEEEECCEEEEECC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccCCCCceEEEEEccCceEEEECC
Confidence 57899999999999999999999999997644899999999999999888877665443333456889999999999999
Q ss_pred CCcChHhhHHHHHHHHhcCCeEEEecCCCChhHHHHHHHHHHHcCCCCCeEEEEcCCchhHHHHHHhCCCcCeEEEeCCH
Q 015031 81 WNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGST 160 (414)
Q Consensus 81 ~n~P~~~~~~~~~~ALaaGN~vv~kps~~~~~~~~~l~~~~~~aglp~g~v~~~~~~~~~~~~~l~~~~~~~~v~~tGs~ 160 (414)
||||+...++++++||++||+||+|||+.+|+++..+++++.++|+|+|++|+++| +.+.++.|+.||++|.|.||||+
T Consensus 156 wN~P~~~~~~~~~~ALaaGN~VVlKps~~tp~t~~~l~~l~~eaGlP~gvv~vv~g-~~~~g~~L~~~~~v~~I~FTGS~ 234 (495)
T 3b4w_A 156 WNVPLFLAVNKIAPALLAGCTIVLKPAAETPLTANALAEVFAEVGLPEGVLSVVPG-GIETGQALTSNPDIDMFTFTGSS 234 (495)
T ss_dssp SSSHHHHHHHHHHHHHHTTCEEEEECBTTSCHHHHHHHHHHHHTTCCTTSEEECCB-SHHHHHHHTTCTTCCEEEEESCH
T ss_pred CcchHHHHHHHHHHHHHcCCEEEEecCCccHHHHHHHHHHHHHhCCCcCeEEEEeC-CHHHHHHHHhCCCcCEEEEeCCH
Confidence 99999999999999999999999999999999999999999999999999999999 88899999999999999999999
Q ss_pred HHHHHHHHHHhhCCCCceeeeCCCCCceeecCCCCHHHHHHHHHHHHhcccCCccccCcEEEEeCccHHHHHHHHHHHHh
Q 015031 161 DVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAK 240 (414)
Q Consensus 161 ~~~~~i~~~~~~~~~~~~~~e~gG~~~~iV~~dadl~~a~~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f~~~l~~~~~ 240 (414)
.+|+.|.+.++ ++++|+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||++++|+|+++|+++++
T Consensus 235 ~~G~~i~~~aa-~~l~pv~lELGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~ 313 (495)
T 3b4w_A 235 AVGREVGRRAA-EMLKPCTLELGGKSAAIILEDVDLAAAIPMMVFSGVMNAGQGCVNQTRILAPRSRYDEIVAAVTNFVT 313 (495)
T ss_dssp HHHHHHHHHHH-HTTCCEEEECCCCEEEEECTTCCHHHHHHHHHHHHHGGGGCCTTCEEEEEEEGGGHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhh-hcCCceeecCCCcceEEECCCCCHHHHHHHHHHHHhhcCCCCCCCCeEEEEcccHHHHHHHHHHHHHH
Confidence 99999999987 78999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccCCCCCCCCCccccCCHHHHHHHHHHHHHhhhcCCeEeeCCcccC--CCCceeeeEEEEeCCCCCcccccccccceE
Q 015031 241 AWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIG--KKGYYIEPTIFTNVTEDMLIAKNEIFGPVM 318 (414)
Q Consensus 241 ~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~--~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl 318 (414)
++++|+|.++++++||+++..+++++++++++++++|+++++||+... ..|+|++|||+.+++++|++++||+||||+
T Consensus 314 ~~~~g~p~~~~~~~gpli~~~~~~rv~~~i~~a~~~Ga~~~~gG~~~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl 393 (495)
T 3b4w_A 314 ALPVGPPSDPAAQIGPLISEKQRTRVEGYIAKGIEEGARLVCGGGRPEGLDNGFFIQPTVFADVDNKMTIAQEEIFGPVL 393 (495)
T ss_dssp HSCBCCTTCTTCCBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCSCCTTCTTSCCCCCEEEESCCTTSHHHHSCCCSSEE
T ss_pred hcCCCCCccCCCccCCCcCHHHHHHHHHHHHHHHhCCCEEEecCcccccccCCceeCCEEecCCCCCChhhhcccccceE
Confidence 999999999999999999999999999999999999999999997643 369999999999999999999999999999
Q ss_pred EEeeeCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHHhccceeEEEECCcCCCCCCCCccCCCCCCCCCcchHHHHHhh
Q 015031 319 ALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSIRAGIIWINCYFAFDSDCPYGGYKMSGFGRDCGLESLHNY 398 (414)
Q Consensus 319 ~v~~~~~~~eai~~~n~~~~gl~~sv~s~d~~~~~~~~~~l~~g~v~vN~~~~~~~~~pfgG~~~sG~g~~~g~~~~~~~ 398 (414)
+|++|+|+||||+++|+++|||++||||+|.+.++++++++++|+|+||+++ ..+.+||||+|.||+|+++|++|+++|
T Consensus 394 ~v~~~~~~deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~V~iN~~~-~~~~~PfGG~k~SG~Gr~~G~~gl~~~ 472 (495)
T 3b4w_A 394 AIIPYDTEEDAIAIANDSVYGLAGSVWTTDVPKGIKISQQIRTGTYGINWYA-FDPGSPFGGYKNSGIGRENGPEGVEHF 472 (495)
T ss_dssp EEEEESSHHHHHHHHHCSSCCSCCEEECSCHHHHHHHHHHSCCSCCEESSCC-CCTTSCBCCSGGGEESCBSHHHHHHTT
T ss_pred EEEecCCHHHHHHHHhcCCCCeEEEEECCCHHHHHHHHHhCCEeEEEECCCC-CCCCCCCCCCCCCCcCccchHHHHHHh
Confidence 9999999999999999999999999999999999999999999999999987 778999999999999999999999999
Q ss_pred hcccEEEEeCC
Q 015031 399 LQVKSVVTPIF 409 (414)
Q Consensus 399 ~~~k~i~~~~~ 409 (414)
+++|+|+.++.
T Consensus 473 ~~~k~v~~~~~ 483 (495)
T 3b4w_A 473 TQQKSVLLPMG 483 (495)
T ss_dssp EEEEEEECCTT
T ss_pred cceeEEEEccC
Confidence 99999988653
|
| >2d4e_A 5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase; HPCC; HET: NAD; 2.10A {Thermus thermophilus} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.6e-91 Score=712.85 Aligned_cols=406 Identities=42% Similarity=0.699 Sum_probs=385.4
Q ss_pred CHHHHHHHHHhHHHHHHHHHHHcCCChHHHhhccHHHHHHHHHHHHHhhhhhcCceecc-ccCccccccccCCcEEEEEc
Q 015031 1 MLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKM-SRALQGYTLREPIGVVGHII 79 (414)
Q Consensus 1 L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~~~~~~~~~~~~-~~~~~~~~~~~P~Gvv~~i~ 79 (414)
|+++++.|++|+++|++++++|+|||..++. .|+..+++.++++++++++..+..++. ..+...+.+++|+|||++|+
T Consensus 92 L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea~-~ev~~~~~~l~~~a~~~~~~~g~~~~~~~~~~~~~~~~~P~GVv~~I~ 170 (515)
T 2d4e_A 92 LLRIAELIEKHADELAVMECLDAGQVLRIVR-AQVARAAENFAFYAEYAEHAMEDRTFPVDRDWLYYTVRVPAGPVGIIT 170 (515)
T ss_dssp HHHHHHHHHHTHHHHHHHHHHHHCCCHHHHH-HHHHHHHHHHHHHHTTGGGTTCEEECCBTTTEEEEEEEEECCCEEEEC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCCHHHHH-HHHHHHHHHHHHHHHHHHHhcCcccccCCCCceeEEEEecCCceEEEC
Confidence 5789999999999999999999999999765 899999999999999888776654443 23455688999999999999
Q ss_pred CCCcChHhhHHHHHHHHhcCCeEEEecCCCChhHHHHHHHHHHHcCCCCCeEEEEcCCchhHHHHHHhCCCcCeEEEeCC
Q 015031 80 PWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGS 159 (414)
Q Consensus 80 p~n~P~~~~~~~~~~ALaaGN~vv~kps~~~~~~~~~l~~~~~~aglp~g~v~~~~~~~~~~~~~l~~~~~~~~v~~tGs 159 (414)
|||||+...++++++||++||+||+|||+.+|+++..+++++.++|+|+|++|+++|++.++++.|+.||++|.|.||||
T Consensus 171 PwN~P~~~~~~~~~~ALaaGN~VVlKps~~tp~t~~~l~~l~~eaGlP~gvv~vv~g~~~~~g~~L~~~p~vd~I~FTGS 250 (515)
T 2d4e_A 171 PWNAPLMLSTWRIAPALAFGNTVVLKPAEWSPFTATKLAEILKEADLPPGVFNLVQGFGEEAGAALVAHPLVPLLTLTGE 250 (515)
T ss_dssp CSSSHHHHHHHHHHHHHHTTCCEEEECCTTSCHHHHHHHHHHHHTTCCTTSEEECCCCTTTHHHHHHHCTTCCEEEEESC
T ss_pred CCCchhhhhhhhhhHHHHcCCeeeecCCCCcHHHHHHHHHHHHHhCCCcCeEEEEeCCchHHHHHHHhCCCcCEEEEeCc
Confidence 99999999999999999999999999999999999999999999999999999999977788999999999999999999
Q ss_pred HHHHHHHHHHHhhCCCCceeeeCCCCCceeecCCCCHHHHHHHHHHHHhcccCCccccCcEEEEeCccHHHHHHHHHHHH
Q 015031 160 TDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKA 239 (414)
Q Consensus 160 ~~~~~~i~~~~~~~~~~~~~~e~gG~~~~iV~~dadl~~a~~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f~~~l~~~~ 239 (414)
+.+|+.|.+.++ ++++|+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||++++|+|+++|++++
T Consensus 251 ~~~G~~I~~~aa-~~l~~v~lELGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~ 329 (515)
T 2d4e_A 251 TETGKIVMRNAA-DHLKRLSPELGGKSPALVFADADLERALDAVVFQIFSFNGERCTASSRLLVEEKIFEDFVGKVVERA 329 (515)
T ss_dssp HHHHHHHHHHHG-GGTCEEEEECCCCCEEEECTTSCHHHHHHHHHHHHHGGGGCSTTCCCEEEEEHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHh-hcCCceEecCCCcCeEEEcCCCCHHHHHHHHHHHHHhcCCCCCCCCeEEEEehhHHHHHHHHHHHHH
Confidence 999999999988 7899999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hccccCCCCCCCCCccccCCHHHHHHHHHHHHHhhhcCCeEeeCCcccC--------CCCceeeeEEEEeCCCCCccccc
Q 015031 240 KAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIG--------KKGYYIEPTIFTNVTEDMLIAKN 311 (414)
Q Consensus 240 ~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~--------~~g~~~~Ptvl~~~~~~~~~~~~ 311 (414)
+++++|+|.++++++||+++..+++++++++++++++|+++++||+... ..|+|++|||+.+ +++|++++|
T Consensus 330 ~~~~~g~p~~~~~~~gpli~~~~~~rv~~~i~~a~~~Ga~~~~gG~~~~~~~~~~~~~~g~~~~PTvl~~-~~~~~i~~e 408 (515)
T 2d4e_A 330 RAIRVGHPLDPETEVGPLIHPEHLQRVLGYVEAGKREGARLLVGGERAKTSFRGEDLSRGNYLLPTVFVG-ENHMKIAQE 408 (515)
T ss_dssp HHCCBCCTTSTTCSBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCSBCCBCTTSCBCTTTTCBCCEEEEC-CTTSHHHHS
T ss_pred hhcccCCcccccCccCCCcCHHHHHHHHHHHHHHHHCCCEEEeCCccccccccccccCCCceeCCEEEeC-CCCChhhhc
Confidence 9999999999999999999999999999999999999999999997643 2699999999999 999999999
Q ss_pred ccccceEEEeeeCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHHhccceeEEEECCcCCCCCCCCccCCCCCCCCCcch
Q 015031 312 EIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSIRAGIIWINCYFAFDSDCPYGGYKMSGFGRDCG 391 (414)
Q Consensus 312 E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~sv~s~d~~~~~~~~~~l~~g~v~vN~~~~~~~~~pfgG~~~sG~g~~~g 391 (414)
|+||||++|++|+|+||||+++|+++|||++||||+|.+.++++++++++|+|+||++....+.+||||+|.||+|+++|
T Consensus 409 EiFGPVl~v~~~~~~deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~V~vN~~~~~~~~~PfGG~k~SG~Gr~~G 488 (515)
T 2d4e_A 409 EIFGPVLVAIPFKDEEEALRKANDTKYGLAAYVFTRDLERAHRLALELEAGMVYLNSHNVRHLPTPFGGVKGSGDRREGG 488 (515)
T ss_dssp CCCSSEEEEEEESSHHHHHHHHHCSSCCSEEEEECSBHHHHHHHHHHSCSSEEEESSSCCCCTTSCBCCSGGGBCSCBSH
T ss_pred cccCCceEEEeeCCHHHHHHHHhcCCCCceEEEECCCHHHHHHHHHhCCeeEEEECCCCCCCCCCCCCCcCCCCCCccch
Confidence 99999999999999999999999999999999999999999999999999999999987777899999999999999999
Q ss_pred HHHHHhhhcccEEEEeCC
Q 015031 392 LESLHNYLQVKSVVTPIF 409 (414)
Q Consensus 392 ~~~~~~~~~~k~i~~~~~ 409 (414)
++|+++|+++|+|+.++.
T Consensus 489 ~~gl~~~~~~K~v~~~~~ 506 (515)
T 2d4e_A 489 TYALDFYTDLKTIALPLR 506 (515)
T ss_dssp HHHHHHHEEEEEEEEESS
T ss_pred HHHHHHhCceeEEEEcCC
Confidence 999999999999988764
|
| >1a4s_A ALDH, betaine aldehyde dehydrogenase; oxidoreductase, aldehyde oxidation; 2.10A {Gadus callarias} SCOP: c.82.1.1 PDB: 1bpw_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.7e-91 Score=713.34 Aligned_cols=407 Identities=40% Similarity=0.730 Sum_probs=385.9
Q ss_pred CHHHHHHHHHhHHHHHHHHHHHcCCChHHHhhccHHHHHHHHHHHHHhhhhhcCceeccccCccccccccCCcEEEEEcC
Q 015031 1 MLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMSRALQGYTLREPIGVVGHIIP 80 (414)
Q Consensus 1 L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p 80 (414)
|+++++.|++|+++|++++++|+|||..++ ..|+..+++.+++++.++++..+...+...+...+..++|+|||++|+|
T Consensus 86 L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea-~~ev~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~P~GVv~~I~P 164 (503)
T 1a4s_A 86 MLEAARIIRERRDNIAKLEVINNGKTITEA-EYDIDAAWQCIEYYAGLAPTLSGQHIQLPGGAFAYTRREPLGVCAGILA 164 (503)
T ss_dssp HHHHHHHHHHTHHHHHHHHHHHHCCCHHHH-HHHHHHHHHHHHHHHHHGGGCCEEEEECGGGCEEEEEEEECSEEEEECC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCCHHHH-HHHHHHHHHHHHHHHHHHHHhcCCcccCCCCceeEEEEecCceEEEECC
Confidence 578999999999999999999999999975 6799999999999999988766554443334466889999999999999
Q ss_pred CCcChHhhHHHHHHHHhcCCeEEEecCCCChhHHHHHHHHHHHcCCCCCeEEEEcCCchhHHHHHHhCCCcCeEEEeCCH
Q 015031 81 WNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGST 160 (414)
Q Consensus 81 ~n~P~~~~~~~~~~ALaaGN~vv~kps~~~~~~~~~l~~~~~~aglp~g~v~~~~~~~~~~~~~l~~~~~~~~v~~tGs~ 160 (414)
||||+...++++++||++||+||+|||+.+|+++..+++++.++|+|+|++|+++|++ ++++.|+.||++|.|.||||+
T Consensus 165 wN~P~~~~~~~~a~ALaaGN~VVlKps~~tp~ta~~l~~l~~~aGlP~gvv~vv~g~~-~~g~~L~~~p~v~~V~FTGS~ 243 (503)
T 1a4s_A 165 WNYPFMIAAWKCAPALACGNAVVFKPSPMTPVTGVILAEIFHEAGVPVGLVNVVQGGA-ETGSLLCHHPNVAKVSFTGSV 243 (503)
T ss_dssp SSSHHHHHHHHHHHHHHTTCEEEEECCTTSCHHHHHHHHHHHHTTCCTTSEEECCCSH-HHHHHHHHCTTCCEEEEESCH
T ss_pred CcchHHHHHHHHHHHHHcCCEEEEECCCCChHHHHHHHHHHHHhCCCcCeEEEEecCc-hHHHHHHhCCCcCEEEEeCCH
Confidence 9999999999999999999999999999999999999999999999999999999977 899999999999999999999
Q ss_pred HHHHHHHHHHhhCCCCceeeeCCCCCceeecCCCCHHHHHHHHHHHHhcccCCccccCcEEEEeCccHHHHHHHHHHHHh
Q 015031 161 DVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAK 240 (414)
Q Consensus 161 ~~~~~i~~~~~~~~~~~~~~e~gG~~~~iV~~dadl~~a~~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f~~~l~~~~~ 240 (414)
.+|+.|.+.++ ++++|+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||++++|+|+++|+++++
T Consensus 244 ~~G~~i~~~aa-~~~~~v~lELGGk~p~IV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~ 322 (503)
T 1a4s_A 244 PTGKKVMEMSA-KTVKHVTLELGGKSPLLIFKDCELENAVRGALMANFLTQGQVCTNGTRVFVQREIMPQFLEEVVKRTK 322 (503)
T ss_dssp HHHHHHHHHHH-TTTCEEEEECCCCCEEEECTTSCHHHHHHHHHHTTCGGGGCCTTCCCEEEEEGGGHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhh-hcCCceEEecCCcCeEEECCCCCHHHHHHHHHHHHHhcCCCCCcCCcEEEEehHHHHHHHHHHHHHHH
Confidence 99999999988 88999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccCCCCCCCCCccccCCHHHHHHHHHHHHHhhhcCCeEeeCCccc--C----CCCceeeeEEEEeCCCCCcccccccc
Q 015031 241 AWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPI--G----KKGYYIEPTIFTNVTEDMLIAKNEIF 314 (414)
Q Consensus 241 ~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ga~v~~gg~~~--~----~~g~~~~Ptvl~~~~~~~~~~~~E~f 314 (414)
++++|+|.++++++||+++..+++++++++++++++|+++++||+.. . ..|+|++|||+.+++++|++++||+|
T Consensus 323 ~~~~G~p~~~~~~~gpli~~~~~~rv~~~i~~a~~~Ga~~~~gG~~~~~~~~~~~~g~~~~PTvl~~v~~~~~i~~eEiF 402 (503)
T 1a4s_A 323 AIVVGDPLLTETRMGGLISKPQLDKVLGFVAQAKKEGARVLCGGEPLTPSDPKLKNGYFMSPCVLDNCRDDMTCVKEEIF 402 (503)
T ss_dssp TCCBSCTTSTTCCBCCCSCHHHHHHHHHHHHHHHHHTCEEEECCSBCCCSSGGGTTSCCBCCEEEESCCTTSHHHHSCCC
T ss_pred hcCCCCCcccCCccCCCcCHHHHHHHHHHHHHHHHCCCEEEeCCcccccccccccCCceeCCEEEecCCCCCHHHhcccc
Confidence 99999999999999999999999999999999999999999999764 2 36899999999999999999999999
Q ss_pred cceEEEeeeCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHHhccceeEEEECCcCCCCCCCCccCCCCCCCCCcchHHH
Q 015031 315 GPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSIRAGIIWINCYFAFDSDCPYGGYKMSGFGRDCGLES 394 (414)
Q Consensus 315 gPvl~v~~~~~~~eai~~~n~~~~gl~~sv~s~d~~~~~~~~~~l~~g~v~vN~~~~~~~~~pfgG~~~sG~g~~~g~~~ 394 (414)
|||++|++|+|+||||+++|+++|||+++|||+|.+.++++++++++|+|+||++....+.+||||+|.||+|+++|++|
T Consensus 403 GPVl~v~~~~~~deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~V~vN~~~~~~~~~PfGG~k~SG~G~~~G~~~ 482 (503)
T 1a4s_A 403 GPVMSVLPFDTEEEVLQRANNTTFGLASGVFTRDISRAHRVAANLEAGTCYINTYSISPVEVPFGGYKMSGFGRENGQAT 482 (503)
T ss_dssp SSEEEEEEECCHHHHHHHHHCSSCCSEEEEECSBHHHHHHHHHHSCSSEEEESCCCCCCTTSCBCCSGGGEECCBSTTGG
T ss_pred CceEEEEecCCHHHHHHHHhcCCCCceEEEECCCHHHHHHHHHHCceeEEEECCCCCCCCCCCCCCcCCCCCCccchHHH
Confidence 99999999999999999999999999999999999999999999999999999987777889999999999999999999
Q ss_pred HHhhhcccEEEEeCCC
Q 015031 395 LHNYLQVKSVVTPIFN 410 (414)
Q Consensus 395 ~~~~~~~k~i~~~~~~ 410 (414)
+++|++.|+|+.++..
T Consensus 483 l~~f~~~k~v~~~~~~ 498 (503)
T 1a4s_A 483 VDYYSQLKTVIVEMGD 498 (503)
T ss_dssp GGGSEEEEEEEECCSC
T ss_pred HHHhcCceEEEEccCC
Confidence 9999999999887643
|
| >3qan_A 1-pyrroline-5-carboxylate dehydrogenase 1; proline oxidation, redox control, apoptosis, NAD binding, oxidoreductase, PSI-biology; 1.95A {Bacillus halodurans} PDB: 3rjl_A | Back alignment and structure |
|---|
Probab=100.00 E-value=3.4e-91 Score=715.36 Aligned_cols=407 Identities=34% Similarity=0.560 Sum_probs=383.3
Q ss_pred CHHHHHHHHHhHHHHHHHHHHHcCCChHHHhhccHHHHHHHHHHHHHh-hhhhcCceeccccCccccccccCCcEEEEEc
Q 015031 1 MLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGA-ADKIHGEVLKMSRALQGYTLREPIGVVGHII 79 (414)
Q Consensus 1 L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~-~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~ 79 (414)
|+++++.|++|+++|++++++|+|||..++ ..|+..+++.+++++.+ .+...+...+...+...+..++|+|||++|+
T Consensus 102 L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea-~~Ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVV~~I~ 180 (538)
T 3qan_A 102 LVKAAAIIRRRKHEFSAWLVHEAGKPWKEA-DADTAEAIDFLEYYARQMIELNRGKEILSRPGEQNRYFYTPMGVTVTIS 180 (538)
T ss_dssp HHHHHHHHHHTHHHHHHHHHHHTCCCHHHH-HHHHHHHHHHHHHHHHHHHHHHTCBCCCCCTTEEEEEEEEECCEEEEEC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCCHHHH-HHHHHHHHHHHHHHHHHHHHhcCCeeecccCCcceeeecCCCcEEEEEC
Confidence 578999999999999999999999999976 45999999999999998 4555555444334667889999999999999
Q ss_pred CCCcChHhhHHHHHHHHhcCCeEEEecCCCChhHHHHHHHHHHHcCCCCCeEEEEcCCchhHHHHHHhCCCcCeEEEeCC
Q 015031 80 PWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGS 159 (414)
Q Consensus 80 p~n~P~~~~~~~~~~ALaaGN~vv~kps~~~~~~~~~l~~~~~~aglp~g~v~~~~~~~~~~~~~l~~~~~~~~v~~tGs 159 (414)
|||||+...++++++||++||+||+|||+.+|+++..|++++.++|+|+|++|+++|++.++++.|+.||++|.|.||||
T Consensus 181 PwN~P~~~~~~~~a~ALaaGN~VVlKps~~tp~ta~~l~~l~~eaGlP~gvv~vv~g~~~~~g~~L~~~p~v~~I~FTGS 260 (538)
T 3qan_A 181 PWNFALAIMVGTAVAPIVTGNTVVLKPASTTPVVAAKFVEVLEDAGLPKGVINYVPGSGAEVGDYLVDHPKTSLITFTGS 260 (538)
T ss_dssp CSTTTTHHHHHHHHHHHHTTCEEEEECCTTSHHHHHHHHHHHHHTTCCTTSEEECCBCTTTTHHHHHHCTTEEEEEEESC
T ss_pred CCchHHHHHHHHHHHHHHcCCEEEEECCCccHHHHHHHHHHHHHhCCCCCeEEEEecCCHHHHHHHHhCCCcCEEEEECC
Confidence 99999999999999999999999999999999999999999999999999999999988889999999999999999999
Q ss_pred HHHHHHHHHHHhhCC------CCceeeeCCCCCceeecCCCCHHHHHHHHHHHHhcccCCccccCcEEEEeCccHHHHHH
Q 015031 160 TDVGRQVMQAAATSN------LKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEK 233 (414)
Q Consensus 160 ~~~~~~i~~~~~~~~------~~~~~~e~gG~~~~iV~~dadl~~a~~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f~~ 233 (414)
+.+|+.|.+.++ ++ ++|+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||++++|+|++
T Consensus 261 ~~~G~~i~~~aa-~~~~~~~~lkpv~lELGGk~p~IV~~dADl~~Aa~~i~~~~f~n~GQ~C~a~~rvlV~~~i~d~f~~ 339 (538)
T 3qan_A 261 KDVGVRLYERAA-VVRPGQNHLKRVIVEMGGKDTVVVDRDADLDLAAESILVSAFGFSGQKCSAGSRAVIHKDVYDEVLE 339 (538)
T ss_dssp HHHHHHHHHHHT-SCCTTCCSCCEEEEECCCCCEEEECTTSCHHHHHHHHHHHHHGGGGCSTTCCCEEEEETTTHHHHHH
T ss_pred HHHHHHHHHHhh-hccccccccccEEEecCCCCceEECCCCCHHHHHHHHHHHHHhcCCCCCccCceeEEehHHHHHHHH
Confidence 999999999987 66 89999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhccccCCCCCCCCCccccCCHHHHHHHHHHHHHhhhcCCeEeeCCcccCCCCceeeeEEEEeCCCCCccccccc
Q 015031 234 KLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIGKKGYYIEPTIFTNVTEDMLIAKNEI 313 (414)
Q Consensus 234 ~l~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~ 313 (414)
+|+++++++++|+|.|+++++||+++..+++++++++++++++| ++++||......|+|++|||+.+++++|++++||+
T Consensus 340 ~l~~~~~~~~vG~p~~~~~~~Gpli~~~~~~rv~~~i~~a~~~G-~~~~gG~~~~~~g~~~~PTvl~~v~~~~~i~~eEi 418 (538)
T 3qan_A 340 KTVALAKNLTVGDPTNRDNYMGPVIDEKAFEKIMSYIEIGKKEG-RLMTGGEGDSSTGFFIQPTIIADLDPEAVIMQEEI 418 (538)
T ss_dssp HHHHHHTTCCBSCTTSTTCSBCCCSCHHHHHHHHHHHHHHHHHS-EEEECCCEECSSSCEECCEEEESCCTTSHHHHSCC
T ss_pred HHHHHHHhccCCCCCCCCCCCcCccCHHHHHHHHHHHHHHHHCC-eEEeCCCcCCCCCceeCCeeeecCCCCChhhCCCc
Confidence 99999999999999999999999999999999999999999999 99999987544799999999999999999999999
Q ss_pred ccceEEEeeeCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHHhccceeEEEEC-CcCCC-CCCCCccCCCCCCCC-Ccc
Q 015031 314 FGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSIRAGIIWIN-CYFAF-DSDCPYGGYKMSGFG-RDC 390 (414)
Q Consensus 314 fgPvl~v~~~~~~~eai~~~n~~~~gl~~sv~s~d~~~~~~~~~~l~~g~v~vN-~~~~~-~~~~pfgG~~~sG~g-~~~ 390 (414)
||||++|++|+|+||||+++|+++|||++||||+|.+.++++++++++|+|+|| +.... .+.+||||+|.||+| +++
T Consensus 419 FGPVl~V~~~~~~deAi~~aN~~~~gLaa~v~t~d~~~a~~~~~~l~aG~V~iN~~~~~~~~~~~PfGG~k~SG~G~~~~ 498 (538)
T 3qan_A 419 FGPVVAFSKANDFDHALEIANNTEYGLTGAVITRNRAHIEQAKREFHVGNLYFNRNCTGAIVGYHPFGGFKMSGTDSKAG 498 (538)
T ss_dssp CSSEEEEEEESSHHHHHHHHHCSSEESEEEEECSCHHHHHHHHHHCCCSEEEESSCSCCCCTTTSCBCCEETTBSCCCBT
T ss_pred CCcEEEEEEeCCHHHHHHHHhcCCCCcEEEEECCCHHHHHHHHHhCCeeEEEEeCCCCCCCCCCCCcCCcCcCCCCcccc
Confidence 999999999999999999999999999999999999999999999999999999 55443 789999999999999 999
Q ss_pred hHHHHHhhhcccEEEEeCCC
Q 015031 391 GLESLHNYLQVKSVVTPIFN 410 (414)
Q Consensus 391 g~~~~~~~~~~k~i~~~~~~ 410 (414)
|++|+++|++.|+|+.+...
T Consensus 499 G~~gl~~ft~~k~v~~~~~~ 518 (538)
T 3qan_A 499 GPDYLALHMQAKTVSEMYAE 518 (538)
T ss_dssp STTTGGGGEEEEEEEEEC--
T ss_pred cHHHHHHhhCeEEEEEecCC
Confidence 99999999999999887643
|
| >3jz4_A Succinate-semialdehyde dehydrogenase [NADP+]; tetramer, NADP binding, oxidoreductase; HET: NAP; 2.30A {Escherichia coli} | Back alignment and structure |
|---|
Probab=100.00 E-value=6.6e-91 Score=706.91 Aligned_cols=405 Identities=39% Similarity=0.666 Sum_probs=385.7
Q ss_pred CHHHHHHHHHhHHHHHHHHHHHcCCChHHHhhccHHHHHHHHHHHHHhhhhhcCceeccc-cCccccccccCCcEEEEEc
Q 015031 1 MLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMS-RALQGYTLREPIGVVGHII 79 (414)
Q Consensus 1 L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~-~~~~~~~~~~P~Gvv~~i~ 79 (414)
|+++++.|++|+++|++++++|+|||..++ ..|+..+++.+++++..+.+..+...+.. .+...+.+++|+|||++|+
T Consensus 75 L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a-~~ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~ 153 (481)
T 3jz4_A 75 LRNWFNLMMEHQDDLARLMTLEQGKPLAEA-KGEISYAASFIEWFAEEGKRIYGDTIPGHQADKRLIVIKQPIGVTAAIT 153 (481)
T ss_dssp HHHHHHHHHHTHHHHHHHHHHHHCCCHHHH-HHHHHHHHHHHHHHHHHGGGCCEEEECCSSTTEEEEEEEEECCEEEEEC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHcCCCHHHH-HHHHHHHHHHHHHHHHHHHHhcCccccccCCCceEEEEEcCccEEEEEC
Confidence 578999999999999999999999999975 57999999999999988876655544332 3556788999999999999
Q ss_pred CCCcChHhhHHHHHHHHhcCCeEEEecCCCChhHHHHHHHHHHHcCCCCCeEEEEcCCchhHHHHHHhCCCcCeEEEeCC
Q 015031 80 PWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGS 159 (414)
Q Consensus 80 p~n~P~~~~~~~~~~ALaaGN~vv~kps~~~~~~~~~l~~~~~~aglp~g~v~~~~~~~~~~~~~l~~~~~~~~v~~tGs 159 (414)
|||||+...++++++||++||+||+|||+.+|+++..+.+++.++|+|+|++|++++++.+.++.|+.||++|.|.||||
T Consensus 154 PwN~P~~~~~~~~~~ALaaGN~VVlKps~~tp~~~~~l~~l~~~aGlP~gvv~vv~g~~~~~g~~L~~~p~v~~I~fTGS 233 (481)
T 3jz4_A 154 PWNFPAAMITRKAGPALAAGCTMVLKPASQTPFSALALAELAIRAGVPAGVFNVVTGSAGAVGNELTSNPLVRKLSFTGS 233 (481)
T ss_dssp CSSSTTHHHHHHHHHHHHHTCEEEEECCTTSCHHHHHHHHHHHHHTCCTTTEEECCBCTHHHHHHHHHCTTEEEEEEESC
T ss_pred CCcchHHHHHHHHHHHHHcCCEEEEECCCCCcHHHHHHHHHHHHhCcCCCeEEEEeCCChHHHHHHHhCCCcCEEEEECC
Confidence 99999999999999999999999999999999999999999999999999999999988889999999999999999999
Q ss_pred HHHHHHHHHHHhhCCCCceeeeCCCCCceeecCCCCHHHHHHHHHHHHhcccCCccccCcEEEEeCccHHHHHHHHHHHH
Q 015031 160 TDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKA 239 (414)
Q Consensus 160 ~~~~~~i~~~~~~~~~~~~~~e~gG~~~~iV~~dadl~~a~~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f~~~l~~~~ 239 (414)
+.+|+.|.+.++ ++++|+++|+|||||+||++|||++.|++.+++++|.|+||.|+++++||||++++|+|+++|++++
T Consensus 234 ~~~g~~i~~~aa-~~~~~v~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~ 312 (481)
T 3jz4_A 234 TEIGRQLMEQCA-KDIKKVSLELGGNAPFIVFDDADLDKAVEGALASKFRNAGQTCVCANRLYVQDGVYDRFAEKLQQAM 312 (481)
T ss_dssp HHHHHHHHHHHT-TTTCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCSTTSEEEEEEEGGGHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHh-hcCCceEEecCCCCeEEEcCCCCHHHHHHHHHHHHHHhCCCcccCCcEEEEeHHHHHHHHHHHHHHH
Confidence 999999999987 8899999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hccccCCCCCCCCCccccCCHHHHHHHHHHHHHhhhcCCeEeeCCcccCCCCceeeeEEEEeCCCCCcccccccccceEE
Q 015031 240 KAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIGKKGYYIEPTIFTNVTEDMLIAKNEIFGPVMA 319 (414)
Q Consensus 240 ~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~ 319 (414)
+++++|+|.++++++||+++..+++++++++++++++|+++++||...+.+|+|++|||+.+++++|++++||+||||++
T Consensus 313 ~~~~~G~p~~~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~v~~gg~~~~~~g~~~~Ptvl~~v~~~~~i~~eEiFGPVl~ 392 (481)
T 3jz4_A 313 SKLHIGDGLDNGVTIGPLIDEKAVAKVEEHIADALEKGARVVCGGKAHERGGNFFQPTILVDVPANAKVSKEETFGPLAP 392 (481)
T ss_dssp TTCCBSCTTSTTCCBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCSBCTTCTTCBCCEEEESCCTTSGGGTSCCCSSEEE
T ss_pred HhccCCCCccCcCccccccCHHHHHHHHHHHHHHHHCCCEEEeCCcccCCCCceeccEEEecCCCCcccccccccCceEE
Confidence 99999999999999999999999999999999999999999999987545789999999999999999999999999999
Q ss_pred EeeeCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHHhccceeEEEECCcCCCCCCCCccCCCCCCCCCcchHHHHHhhh
Q 015031 320 LMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSIRAGIIWINCYFAFDSDCPYGGYKMSGFGRDCGLESLHNYL 399 (414)
Q Consensus 320 v~~~~~~~eai~~~n~~~~gl~~sv~s~d~~~~~~~~~~l~~g~v~vN~~~~~~~~~pfgG~~~sG~g~~~g~~~~~~~~ 399 (414)
|++|+|+||||+++|+++|||++||||+|.+.++++++++++|.|+||++....+.+||||+|.||+|+++|++|+++||
T Consensus 393 v~~~~~~deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~~G~v~iN~~~~~~~~~PfGG~k~SG~G~~~g~~g~~~~t 472 (481)
T 3jz4_A 393 LFRFKDEADVIAQANDTEFGLAAYFYARDLSRVFRVGEALEYGIVGINTGIISNEVAPFGGIKASGLGREGSKYGIEDYL 472 (481)
T ss_dssp EEEECCHHHHHHHHHCSSCCSEEEEECCBHHHHHHHHHHCCCSEEEESCSCCCCSSSCBCCSGGGEESCBSHHHHHHTTE
T ss_pred EEEECCHHHHHHHHhcCCCCceEEEECCCHHHHHHHHHhCCeeeEEECCCCCCCCCCCcCCcccCcCCCCchHHHHHHhh
Confidence 99999999999999999999999999999999999999999999999998877889999999999999999999999999
Q ss_pred cccEEEEe
Q 015031 400 QVKSVVTP 407 (414)
Q Consensus 400 ~~k~i~~~ 407 (414)
+.|+|++.
T Consensus 473 ~~k~v~~~ 480 (481)
T 3jz4_A 473 EIKYMCIG 480 (481)
T ss_dssp EEEEEEEE
T ss_pred ceeEEEEe
Confidence 99999875
|
| >3prl_A NADP-dependent glyceraldehyde-3-phosphate dehydro; structural genomics, protein structure initiative, dehydroge PSI-biology; 2.00A {Bacillus halodurans} PDB: 3rhh_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4.3e-91 Score=710.10 Aligned_cols=401 Identities=33% Similarity=0.540 Sum_probs=380.0
Q ss_pred CHHHHHHHHHhHHHHHHHHHHHcCCChHHHhhccHHHHHHHHHHHHHhhhhhcCceeccc--c----CccccccccCCcE
Q 015031 1 MLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMS--R----ALQGYTLREPIGV 74 (414)
Q Consensus 1 L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~--~----~~~~~~~~~P~Gv 74 (414)
|+++++.|++|+++|++++++|+|||..++ ..|+..+++.+++++.++++..+...+.. . +...+++++|+||
T Consensus 77 L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea-~~Ev~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~P~GV 155 (505)
T 3prl_A 77 LYAWADLLEERKEIIGELIMHEVAKPKKSA-IGEVSRTADIIRHTADEALRLNGETLKGDQFKGGSSKKIALVEREPLGV 155 (505)
T ss_dssp HHHHHHHHHHTHHHHHHHHHHHHTCCHHHH-HHHHHHHHHHHHHHHHHHHTCCEEEEEGGGSTTTCSSEEEEEEEEECSE
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCCHHHH-HHHHHHHHHHHHHHHHHHHHhcCccccccccccccCCceeEEEEcCCcE
Confidence 578999999999999999999999999975 46999999999999999887665544332 1 3456888999999
Q ss_pred EEEEcCCCcChHhhHHHHHHHHhcCCeEEEecCCCChhHHHHHHHHHHHcCCCCCeEEEEcCCchhHHHHHHhCCCcCeE
Q 015031 75 VGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKV 154 (414)
Q Consensus 75 v~~i~p~n~P~~~~~~~~~~ALaaGN~vv~kps~~~~~~~~~l~~~~~~aglp~g~v~~~~~~~~~~~~~l~~~~~~~~v 154 (414)
|++|+|||||+...++++++||++||+||+|||+.+|.++..|.+++.++|+|+|++|+++|++.++++.|+.||++|.|
T Consensus 156 V~~I~PwN~P~~~~~~~~a~ALaaGN~VVlKpse~tp~ta~~l~~ll~eaGlP~gvv~vv~g~~~~~g~~L~~~p~vd~I 235 (505)
T 3prl_A 156 VLAISPFNYPVNLAAAKIAPALVTGNTVVFKPATQGSLSGIKMVEALADAGAPEGIIQVVTGRGSVIGDHLVEHPGIDMI 235 (505)
T ss_dssp EEEEECSSSTTHHHHHHHHHHHHTTCEEEEEECSTTHHHHHHHHHHHHHTTCCTTSEEECCCCHHHHHHHHHTCTTCCEE
T ss_pred EEEECCCccHHHHHHHHHHHHHHcCCEEEEECCCCChHHHHHHHHHHHHhCcCcCeEEEEeCCCHHHHHHHHhCCCCCEE
Confidence 99999999999999999999999999999999999999999999999999999999999999888899999999999999
Q ss_pred EEeCCHHHHHHHHHHHhhCCCCceeeeCCCCCceeecCCCCHHHHHHHHHHHHhcccCCccccCcEEEEeCccHHHHHHH
Q 015031 155 SFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKK 234 (414)
Q Consensus 155 ~~tGs~~~~~~i~~~~~~~~~~~~~~e~gG~~~~iV~~dadl~~a~~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f~~~ 234 (414)
.||||+.+|+.|.+.++ ++|+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||++++|+|+++
T Consensus 236 ~FTGS~~~G~~i~~~aa---l~~v~lELGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~ 312 (505)
T 3prl_A 236 TFTGGTTTGERISEKAK---MIPVVLELGGKDPAIVLDDADLKLTASQIVSGAFSYSGQRCTAIKRVFVQDSVADQLVAN 312 (505)
T ss_dssp EEESCHHHHHHHHHHCC---SSCEEEECCCCEEEEECTTCCHHHHHHHHHHHHHGGGGCCSSSEEEEEEEHHHHHHHHHH
T ss_pred EEeCCHHHHHHHHHHcc---CCcEEEECCCCCCCccCCCCCHHHHHHHHHHHHHhcCCCccccCceEEEeHHHHHHHHHH
Confidence 99999999999998864 899999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhccccCCCCCCCCCccccCCHHHHHHHHHHHHHhhhcCCeEeeCCcccCCCCceeeeEEEEeCCCCCcccccccc
Q 015031 235 LVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIGKKGYYIEPTIFTNVTEDMLIAKNEIF 314 (414)
Q Consensus 235 l~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~f 314 (414)
|+++++++++|+|. +++++||+++..+++++.+++++++++|+++++||.. .|+|++|||+.+++++|++++||+|
T Consensus 313 l~~~~~~~~~g~p~-~~~~~gpli~~~~~~rv~~~i~~a~~~Ga~v~~gG~~---~g~~~~PTvl~~v~~~~~i~~eEiF 388 (505)
T 3prl_A 313 IKELVEQLTVGSPE-DDADITPVIDEKSAAFIQGLIDDALENGATLLSGNKR---QGNLLSPTLLDDVTPAMRVAWEEPF 388 (505)
T ss_dssp HHHHHHHCCBSCTT-TTCSBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCCE---ETTEECCEEEESCCTTSGGGTSCCC
T ss_pred HHHHHHhcccCCCC-CcCcCCcccCHHHHHHHHHHHHHHHHCCCEEEecCCC---CCceeCCeEeecCCCCChhhcCCcc
Confidence 99999999999999 9999999999999999999999999999999999974 6899999999999999999999999
Q ss_pred cceEEEeeeCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHHhccceeEEEECCcCC-CCCCCCccCCCCCCCCCcchHH
Q 015031 315 GPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSIRAGIIWINCYFA-FDSDCPYGGYKMSGFGRDCGLE 393 (414)
Q Consensus 315 gPvl~v~~~~~~~eai~~~n~~~~gl~~sv~s~d~~~~~~~~~~l~~g~v~vN~~~~-~~~~~pfgG~~~sG~g~~~g~~ 393 (414)
|||++|++|+|+||||+++|+++|||++||||+|.+.++++++++++|+|+||++.. ..+.+||||+|.||+|+++|.+
T Consensus 389 GPVl~V~~~~~~deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~V~iN~~~~~~~~~~PFGG~k~SG~Gr~~g~~ 468 (505)
T 3prl_A 389 GPVLPIIRVKDANEAISLSNQSDYGLQASIFTKDTDRAINIGKHLEVGTVHINAKTERGPDHFPFLGVKKSGLGVQGIKP 468 (505)
T ss_dssp SSEEEEEEESSHHHHHHHHHTSSEESEEEEECSCHHHHHHHHHTSCSSEEEESSCCCSCSTTSCBCCEETTEESCBSHHH
T ss_pred CcEEEEEEeCCHHHHHHHHhCCCCCeEEEEEcCCHHHHHHHHHHCCeeEEEEcCCCCCCCCCCCcCCcCcCCCCcCccHH
Confidence 999999999999999999999999999999999999999999999999999999876 4578999999999999999999
Q ss_pred HHHhhhcccEEEEeCC
Q 015031 394 SLHNYLQVKSVVTPIF 409 (414)
Q Consensus 394 ~~~~~~~~k~i~~~~~ 409 (414)
|+++|++.|+|+++..
T Consensus 469 ~~~~f~~~k~v~~~~~ 484 (505)
T 3prl_A 469 SLLSMTRERVTVLNLA 484 (505)
T ss_dssp HHHHTEEEEEEEEEC-
T ss_pred HHHHhhceEEEEEeCC
Confidence 9999999999988764
|
| >3r31_A BADH, betaine aldehyde dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.15A {Agrobacterium tumefaciens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-91 Score=715.46 Aligned_cols=403 Identities=40% Similarity=0.705 Sum_probs=383.6
Q ss_pred CHHHHHHHHHhHHHHHHHHHHHcCCChHHHhhccHHHHHHHHHHHHHhhhh----hcCceeccccCccccccccCCcEEE
Q 015031 1 MLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADK----IHGEVLKMSRALQGYTLREPIGVVG 76 (414)
Q Consensus 1 L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~~~~----~~~~~~~~~~~~~~~~~~~P~Gvv~ 76 (414)
|+++++.|++|+++|++++++|+|||..++ |+..+++.+++++.++++ ..+...+...+. .+.+++|+|||+
T Consensus 80 L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea---ev~~~~~~~~~~a~~~~~~~~~~~g~~~~~~~~~-~~~~~~P~GVV~ 155 (517)
T 3r31_A 80 LKRAADIMRERNDALSTLETLDTGKPIQET---IVADPTSGADAFEFFGGIAPSALNGDYIPLGGDF-AYTKRVPLGVCV 155 (517)
T ss_dssp HHHHHHHHHHTHHHHHHHHHHHHCCCHHHH---HHHSHHHHHHHHHHHHHHHHHHTCCCEEECSSSE-EEEEEEECSEEE
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCCHHHH---HHHHHHHHHHHHHHHhhhccccccCcccccCCCc-ceEEEcCccEEE
Confidence 578999999999999999999999999975 999999999999998877 666555443455 889999999999
Q ss_pred EEcCCCcChHhhHHHHHHHHhcCCeEEEecCCCChhHHHHHHHHHHHcCCCCCeEEEEcCCchhHHHHHHhCCCcCeEEE
Q 015031 77 HIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSF 156 (414)
Q Consensus 77 ~i~p~n~P~~~~~~~~~~ALaaGN~vv~kps~~~~~~~~~l~~~~~~aglp~g~v~~~~~~~~~~~~~l~~~~~~~~v~~ 156 (414)
+|+|||||+...++++++||++||+||+|||+.+|.++..+++++.++|+|+|++|+++| +.+.++.|+.||++|.|.|
T Consensus 156 ~I~PwN~P~~~~~~~~a~ALaaGN~VVlKps~~tp~t~~~l~~ll~eaGlP~gvv~vv~g-~~~~g~~L~~~p~vd~I~F 234 (517)
T 3r31_A 156 GIGAWNYPQQIACWKAAPALVAGNAMVFKPSENTPLGALKIAEILIEAGLPKGLFNVIQG-DRDTGPLLVNHPDVAKVSL 234 (517)
T ss_dssp EECCSSSHHHHHHHHHHHHHHTTCEEEEECCTTSCSHHHHHHHHHHHTTCCTTSEEECCC-CTTHHHHHHTCTTEEEEEE
T ss_pred EECCCcchHHHHHHHHHHHHHcCCEEEEEcCcccHHHHHHHHHHHHHhCcCcccEEEEEC-CHHHHHHHHhCCCcCEEec
Confidence 999999999999999999999999999999999999999999999999999999999999 7789999999999999999
Q ss_pred eCCHHHHHHHHHHHhhCCCCceeeeCCCCCceeecCCCCHHHHHHHHHHHHhcccCCccccCcEEEEeCccHHHHHHHHH
Q 015031 157 TGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLV 236 (414)
Q Consensus 157 tGs~~~~~~i~~~~~~~~~~~~~~e~gG~~~~iV~~dadl~~a~~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f~~~l~ 236 (414)
|||+.+|+.|.+.++ ++++|+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||++++|+|+++|+
T Consensus 235 TGS~~~G~~i~~~aa-~~lk~v~lElGGk~p~IV~~dADl~~Aa~~i~~~~f~n~GQ~C~a~~rvlV~~~i~d~f~~~l~ 313 (517)
T 3r31_A 235 TGSVPTGRKVAAAAA-GHLKHVTMELGGKSPMIVFDDADIESAVGGAMLGNFYSSGQVCSNGTRVFVQKKAKARFLENLK 313 (517)
T ss_dssp ESCHHHHHHHHHHHH-HTTCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHTSCCHHHHTTCEEEEEEGGGHHHHHHHHH
T ss_pred cCCHHHHHHHHHHhh-cCCCcEEEEcCCcCeEEEecCCCHHHHHHHHHHHHhcCCCceeccCceEEEeHHHHHHHHHHHH
Confidence 999999999999988 7899999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhccccCCCCCCCCCccccCCHHHHHHHHHHHHHhhhcCCeEeeCCcccC---CCCceeeeEEEEeCCCCCccccccc
Q 015031 237 EKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIG---KKGYYIEPTIFTNVTEDMLIAKNEI 313 (414)
Q Consensus 237 ~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~---~~g~~~~Ptvl~~~~~~~~~~~~E~ 313 (414)
++++++++|+|.|+++++||++++.++++++++|++++++|+++++||...+ .+|+|++|||+.+++++|++++||+
T Consensus 314 ~~~~~~~~G~p~~~~~~~Gpli~~~~~~rv~~~i~~a~~~Ga~v~~gG~~~~~~~~~g~~~~PTvl~~v~~~~~i~~eEi 393 (517)
T 3r31_A 314 RRTEAMILGDPLDYATHLGPLVSKAQQEKVLSYIEKGKAEGATLITGGGIPNNVAGEGAYVQPTVFADVTDDMTIAREEI 393 (517)
T ss_dssp HHHHHCCBCCTTSTTCSBCCBSCHHHHHHHHHHHHHHHHHTCEEEECCSCCSSCCSSSBCCCCEEEEEECTTSHHHHSCC
T ss_pred HHHHhccCCCCCCcCCcccCCcCHHHHHHHHHHHHHHHhCCCEEEECCccCcccCCCCceECCEEEecCCCCCcccccee
Confidence 9999999999999999999999999999999999999999999999993121 3799999999999999999999999
Q ss_pred ccceEEEeeeCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHHhccceeEEEECCcCCCCCCCCccCCCCCCCCCcchHH
Q 015031 314 FGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSIRAGIIWINCYFAFDSDCPYGGYKMSGFGRDCGLE 393 (414)
Q Consensus 314 fgPvl~v~~~~~~~eai~~~n~~~~gl~~sv~s~d~~~~~~~~~~l~~g~v~vN~~~~~~~~~pfgG~~~sG~g~~~g~~ 393 (414)
||||++|++|+|.||||+++|+++|||++||||+|.+.++++++++++|+|+||+.....+.+||||+|.||+|+++|++
T Consensus 394 FGPVl~v~~~~~~deAi~~aN~~~~gLaa~v~t~d~~~a~~~~~~l~aG~V~iN~~~~~~~~~PfGG~k~SG~Gr~~G~~ 473 (517)
T 3r31_A 394 FGPVMCVLDFDDEDEVLARANATEFGLAGGVFTADLARAHRVVDGLEAGTLWINTYNLCPVEIPFGGSKQSGFGRENSAA 473 (517)
T ss_dssp SSSEEEEEEECCHHHHHHHHHCSSEESEEEEECSCHHHHHHHHHHSCCSEEEESSCCCCCTTSCBCCEETTEECCBSTGG
T ss_pred eccEEEEEEeCCHHHHHHHHhCCCCCeeEEEEeCCHHHHHHHHHHCCcceEEECCCCCCCCCCCcCCcCcCCCCcCchHH
Confidence 99999999999999999999999999999999999999999999999999999998877889999999999999999999
Q ss_pred HHHhhhcccEEEEeCC
Q 015031 394 SLHNYLQVKSVVTPIF 409 (414)
Q Consensus 394 ~~~~~~~~k~i~~~~~ 409 (414)
|+++||+.|+|+++..
T Consensus 474 gl~~ft~~K~v~~~~~ 489 (517)
T 3r31_A 474 ALEHYSELKTVYVSTG 489 (517)
T ss_dssp GGGGSEEEEEEEECCC
T ss_pred HHHHhhceEEEEEcCC
Confidence 9999999999988753
|
| >1wnd_A Putative betaine aldehyde dehydrogenase; NADH, fluorescence, kinetics, oxidor; 2.10A {Escherichia coli} SCOP: c.82.1.1 PDB: 1wnb_A | Back alignment and structure |
|---|
Probab=100.00 E-value=7e-91 Score=706.97 Aligned_cols=404 Identities=37% Similarity=0.643 Sum_probs=382.3
Q ss_pred CHHHHHHHHHhHHHHHHHHHHHcCCChHHHhhccHHHHHHHHHHHHHhhhhhcCceeccc-cCccccccccCCcEEEEEc
Q 015031 1 MLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMS-RALQGYTLREPIGVVGHII 79 (414)
Q Consensus 1 L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~-~~~~~~~~~~P~Gvv~~i~ 79 (414)
|+++++.|++|+++|++++++|+|||..++...|+..+++.++++++++++..++.++.. .+...+..++|+|||++|+
T Consensus 88 L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea~~~Ev~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~~P~GVV~~I~ 167 (495)
T 1wnd_A 88 LLKLADVIEENGQVFAELESRNCGKPLHSAFNDEIPAIVDVFRFFAGAARCLNGLAAGEYLEGHTSMIRRDPLGVVASIA 167 (495)
T ss_dssp HHHHHHHHHHTHHHHHHHHHHHHCCCHHHHHHTHHHHHHHHHHHHHHHTTCCEEECBEEEETTEEEEEEEEECSEEEEEC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCccccCCCCCceeEEeeecCCeEEEEC
Confidence 578999999999999999999999999976444999999999999998877665543332 3445688999999999999
Q ss_pred CCCcChHhhHHHHHHHHhcCCeEEEecCCCChhHHHHHHHHHHHcCCCCCeEEEEcCCchhHHHHHHhCCCcCeEEEeCC
Q 015031 80 PWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGS 159 (414)
Q Consensus 80 p~n~P~~~~~~~~~~ALaaGN~vv~kps~~~~~~~~~l~~~~~~aglp~g~v~~~~~~~~~~~~~l~~~~~~~~v~~tGs 159 (414)
|||||+...++++++||++||+||+|||+.+|.++..+++++.++ +|+|++|+++|++.+.++.|+.||++|.|.||||
T Consensus 168 PwN~P~~~~~~~~a~ALaaGN~VVlKps~~tp~t~~~l~~l~~ea-lP~gvv~vv~g~~~~~g~~L~~~p~vd~I~FTGS 246 (495)
T 1wnd_A 168 PWNYPLMMAAWKLAPALAAGNCVVLKPSEITPLTALKLAELAKDI-FPAGVVNILFGRGKTVGDPLTGHPKVRMVSLTGS 246 (495)
T ss_dssp CSSSHHHHHHHHHHHHHHTTCEEEEECCTTCCHHHHHHHHHHTTT-SCTTSEEECCCCTTTTHHHHHTCTTEEEEEEESC
T ss_pred CCcchHHHHHHHHHHHHHcCCeeEeeCCCCChHHHHHHHHHHHHh-CCcCeEEEEeCCCHHHHHHHHhCCCcCEEEEECc
Confidence 999999999999999999999999999999999999999999999 9999999999987788999999999999999999
Q ss_pred HHHHHHHHHHHhhCCCCceeeeCCCCCceeecCCCCHHHHHHHHHHHHhcccCCccccCcEEEEeCccHHHHHHHHHHHH
Q 015031 160 TDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKA 239 (414)
Q Consensus 160 ~~~~~~i~~~~~~~~~~~~~~e~gG~~~~iV~~dadl~~a~~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f~~~l~~~~ 239 (414)
+.+|+.|.+.++ ++++|+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||++++|+|+++|++++
T Consensus 247 ~~~G~~i~~~aa-~~l~~v~lELGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~ 325 (495)
T 1wnd_A 247 IATGEHIISHTA-SSIKRTHMELGGKAPVIVFDDADIEAVVEGVRTFGYYNAGQDCTAACRIYAQKGIYDTLVEKLGAAV 325 (495)
T ss_dssp HHHHHHHHHHHG-GGTCEEEEECCCCCEEEECTTSCHHHHHHHHHHHTTGGGGCSTTCCCEEEEETTTHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH-hcCCccccccCCCCeEEECCcCCHHHHHHHHHHHHHhcCCCCCCCCcEEEecchhHHHHHHHHHHHH
Confidence 999999999987 7899999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hccccCCCCCCCCCccccCCHHHHHHHHHHHHHhhhcC-CeEeeCCc-ccCCCCceeeeEEEEeCCCCCcccccccccce
Q 015031 240 KAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREG-ATLLTGGK-PIGKKGYYIEPTIFTNVTEDMLIAKNEIFGPV 317 (414)
Q Consensus 240 ~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~g-a~v~~gg~-~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPv 317 (414)
+++++|+|.|+++++||+++..+++++++++++++++| +++++||+ .. +.|+|++|||+.+++++|++++||+||||
T Consensus 326 ~~~~~g~p~~~~~~~Gpli~~~~~~rv~~~i~~a~~~G~a~~~~gG~~~~-~~g~~~~PTvl~~v~~~~~i~~eEiFGPV 404 (495)
T 1wnd_A 326 ATLKSGAPDDESTELGPLSSLAHLERVGKAVEEAKATGHIKVITGGEKRK-GNGYYYAPTLLAGALQDDAIVQKEVFGPV 404 (495)
T ss_dssp HTCCBCCTTSTTCCBCCCSCHHHHHHHHHHHHHHHHTSSCEEEECCSBCS-SSSCCBCCEEEECCCTTSHHHHSCCCSSE
T ss_pred HhccCCCCccCCCCccCCCCHHHHHHHHHHHHHHHhCCCeEEEECCcccC-CCCCeeCCEEEeCCCCCChhhhccccCce
Confidence 99999999999999999999999999999999999999 99999997 53 26999999999999999999999999999
Q ss_pred EEEeeeCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHHhccceeEEEECCcCCCCCCCCccCCCCCCCCCcchHHHHHh
Q 015031 318 MALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSIRAGIIWINCYFAFDSDCPYGGYKMSGFGRDCGLESLHN 397 (414)
Q Consensus 318 l~v~~~~~~~eai~~~n~~~~gl~~sv~s~d~~~~~~~~~~l~~g~v~vN~~~~~~~~~pfgG~~~sG~g~~~g~~~~~~ 397 (414)
++|++|+|+||||+++|+++|||+++|||+|.+.++++++++++|+|+||++....+.+||||+|.||+|+++|.+|+++
T Consensus 405 l~v~~~~~~deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~V~iN~~~~~~~~~PfGG~k~SG~Gr~~G~~gl~~ 484 (495)
T 1wnd_A 405 VSVTPFDNEEQVVNWANDSQYGLASSVWTKDVGRAHRVSARLQYGCTWVNTHFMLVSEMPHGGQKLSGYGKDMSLYGLED 484 (495)
T ss_dssp EEEEEECCHHHHHHHHHSSSCCSEEEEECSBHHHHHHHHHHCCSSEEEESCCCCCCTTSCBCCSGGGEECCBSHHHHHHT
T ss_pred EEEEEeCCHHHHHHHHhcCCCCeeEEEECCCHHHHHHHHHhCCcceEEECCCCCCCCCCCCCCCCcCcCCccchHHHHHH
Confidence 99999999999999999999999999999999999999999999999999987777899999999999999999999999
Q ss_pred hhcccEEEEe
Q 015031 398 YLQVKSVVTP 407 (414)
Q Consensus 398 ~~~~k~i~~~ 407 (414)
|+++|+|+.+
T Consensus 485 f~~~k~v~~~ 494 (495)
T 1wnd_A 485 YTVVRHVMVK 494 (495)
T ss_dssp TEEEEEEEEE
T ss_pred hhCeEEEEec
Confidence 9999999764
|
| >2imp_A Lactaldehyde dehydrogenase; protein-lactate-NADH ternary complex, oxidoreductase; HET: NAI; 2.10A {Escherichia coli} PDB: 2ilu_A* 2hg2_A* 2opx_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=8.7e-91 Score=705.67 Aligned_cols=405 Identities=35% Similarity=0.592 Sum_probs=383.7
Q ss_pred CHHHHHHHHHhHHHHHHHHHHHcCCChHHHhhccHHHHHHHHHHHHHhhhhhcCceeccc-cCccccccccCCcEEEEEc
Q 015031 1 MLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMS-RALQGYTLREPIGVVGHII 79 (414)
Q Consensus 1 L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~-~~~~~~~~~~P~Gvv~~i~ 79 (414)
|+++++.|++|+++|++++++|+|||..++ ..|+..+++.++++++++++..+...+.. .+...+..++|+|||++|+
T Consensus 72 L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea-~~ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~ 150 (479)
T 2imp_A 72 LRKISAGIRERASEISALIVEEGGKIQQLA-EVEVAFTADYIDYMAEWARRYEGEIIQSDRPGENILLFKRALGVTTGIL 150 (479)
T ss_dssp HHHHHHHHHHTHHHHHHHHHHHHCCCHHHH-HHHHHHHHHHHHHHHTTTTTCCCEEECCSSTTEEEEEEEEECSEEEEEC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCCHHHH-HHHHHHHHHHHHHHHHHHHHhhCCccccCCCCceeEEEEeccceEEEEC
Confidence 578999999999999999999999999975 57999999999999998877666543332 3446788999999999999
Q ss_pred CCCcChHhhHHHHHHHHhcCCeEEEecCCCChhHHHHHHHHHHHcCCCCCeEEEEcCCchhHHHHHHhCCCcCeEEEeCC
Q 015031 80 PWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGS 159 (414)
Q Consensus 80 p~n~P~~~~~~~~~~ALaaGN~vv~kps~~~~~~~~~l~~~~~~aglp~g~v~~~~~~~~~~~~~l~~~~~~~~v~~tGs 159 (414)
|||||+...++++++||++||+||+|||+.+|+++..+++++.++|+|+|++|+++|++.++++.|+.||++|.|.||||
T Consensus 151 PwN~P~~~~~~~~~~ALaaGN~VVlKps~~tp~t~~~l~~l~~~aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~V~fTGS 230 (479)
T 2imp_A 151 PWNFPFFLIARKMAPALLTGNTIVIKPSEFTPNNAIAFAKIVDEIGLPRGVFNLVLGRGETVGQELAGNPKVAMVSMTGS 230 (479)
T ss_dssp CSSSHHHHHHHHHHHHHHTTCEEEEECCTTSCHHHHHHHHHHHHHTCCTTSEEECCSCTTTHHHHHHHCTTEEEEEEESC
T ss_pred CCchHHHHHHHHHHHHHHcCCEEEEECCccchHHHHHHHHHHHHhCCCcCeEEEEECCcHHHHHHHHhCCCcCEEEEeCC
Confidence 99999999999999999999999999999999999999999999999999999999977778999999999999999999
Q ss_pred HHHHHHHHHHHhhCCCCceeeeCCCCCceeecCCCCHHHHHHHHHHHHhcccCCccccCcEEEEeCccHHHHHHHHHHHH
Q 015031 160 TDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKA 239 (414)
Q Consensus 160 ~~~~~~i~~~~~~~~~~~~~~e~gG~~~~iV~~dadl~~a~~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f~~~l~~~~ 239 (414)
+.+|+.|.+.++ ++++|+++|+|||||+||++|||++.|++.+++++|.|+||.|+++++||||++++|+|+++|++++
T Consensus 231 ~~~g~~i~~~aa-~~~~~v~lElGGk~p~iV~~dADl~~aa~~i~~~~~~n~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~ 309 (479)
T 2imp_A 231 VSAGEKIMATAA-KNITKVCLELGGKAPAIVMDDADLELAVKAIVDSRVINSGQVCNCAERVYVQKGIYDQFVNRLGEAM 309 (479)
T ss_dssp HHHHHHHHHHHH-TTTCEEEEECCCCCEEEECTTSCHHHHHHHHHTTSSTTTTCCSSSCSEEEEEGGGHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHh-ccCCcEEEEcCCcCeEEECCCCCHHHHHHHHHHHHhhcCCCcCcCCcEEEEehhhHHHHHHHHHHHH
Confidence 999999999988 8899999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hccccCCCCC-CCCCccccCCHHHHHHHHHHHHHhhhcCCeEeeCCcccCCCCceeeeEEEEeCCCCCcccccccccceE
Q 015031 240 KAWVVGDPFD-PAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIGKKGYYIEPTIFTNVTEDMLIAKNEIFGPVM 318 (414)
Q Consensus 240 ~~~~~g~~~~-~~~~~gpl~~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl 318 (414)
+++++|+|.| +++++||++++.+++++++++++++++|+++++||+..+..|+|++|||+.+++++|++++||+||||+
T Consensus 310 ~~~~~g~p~~~~~~~~gpli~~~~~~rv~~~i~~a~~~Ga~~~~gG~~~~~~g~~~~Ptvl~~v~~~~~~~~eEiFGPVl 389 (479)
T 2imp_A 310 QAVQFGNPAERNDIAMGPLINAAALERVEQKVARAVEEGARVAFGGKAVEGKGYYYPPTLLLDVRQEMSIMHEETFGPVL 389 (479)
T ss_dssp HTCCBSCTTTCSSCSBCCCSSHHHHHHHHHHHHHHHHTTCEEEECCCCCCSSSCCCCCEEEESCCTTSGGGGSCCCSSEE
T ss_pred HhcccCCccccCCCccCCCcCHHHHHHHHHHHHHHHHCCCEEEECCcccCCCCceECCEEEeCCCCCCHHHhCccCCceE
Confidence 9999999999 999999999999999999999999999999999997643468999999999999999999999999999
Q ss_pred EEeeeCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHHhccceeEEEECCcCCCCCCCCccCCCCCCCCCcchHHHHHhh
Q 015031 319 ALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSIRAGIIWINCYFAFDSDCPYGGYKMSGFGRDCGLESLHNY 398 (414)
Q Consensus 319 ~v~~~~~~~eai~~~n~~~~gl~~sv~s~d~~~~~~~~~~l~~g~v~vN~~~~~~~~~pfgG~~~sG~g~~~g~~~~~~~ 398 (414)
+|++|+|+||||+++|+++|||++||||+|.+.++++++++++|+|+||++....+.+||||+|.||+|+++|++|+++|
T Consensus 390 ~v~~~~~~~eAi~~aN~~~~gL~a~v~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~PfGG~k~SG~G~~~g~~~l~~~ 469 (479)
T 2imp_A 390 PVVAFDTLEDAISMANDSDYGLTSSIYTQNLNVAMKAIKGLKFGETYINRENFEAMQGFHAGWRKSGIGGADGKHGLHEY 469 (479)
T ss_dssp EEEEESSHHHHHHHHHCSSEESEEEEECCCHHHHHHHHHHCCSSEEEESSCCCCCTTSCBCCEETTEESCBSHHHHHHTT
T ss_pred EEEeeCCHHHHHHHHhcCCCCeeEEEECCCHHHHHHHHHhCCEeEEEECCCCCCCCCCCCCCCCCCCCCCCchHHHHHHh
Confidence 99999999999999999999999999999999999999999999999999877678999999999999999999999999
Q ss_pred hcccEEEEe
Q 015031 399 LQVKSVVTP 407 (414)
Q Consensus 399 ~~~k~i~~~ 407 (414)
+++|+|+.+
T Consensus 470 ~~~k~v~~~ 478 (479)
T 2imp_A 470 LQTQVVYLQ 478 (479)
T ss_dssp EEEEEEEEE
T ss_pred cCeeEEEec
Confidence 999999763
|
| >3i44_A Aldehyde dehydrogenase; oxidoreductase, structural genomics, seattle structural genomics center for infectious disease, ssgcid; 2.00A {Bartonella henselae} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.5e-90 Score=704.78 Aligned_cols=402 Identities=35% Similarity=0.592 Sum_probs=377.0
Q ss_pred CHHHHHHHHHhHHHHHHHHHHHcCCChHHHhhccHHHHHHHHHHHHHhhhhhcCceeccccCcccccc-ccCCcEEEEEc
Q 015031 1 MLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMSRALQGYTL-REPIGVVGHII 79 (414)
Q Consensus 1 L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~-~~P~Gvv~~i~ 79 (414)
|+++++.|++|+++|++++++|+|||..++...|+..+++.++++++..+........ ..+...+++ ++|+|||++|+
T Consensus 91 L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a~~~ev~~~~~~~~~~a~~~~~~~~~~~~-~~~~~~~~~~~~P~GVv~~I~ 169 (497)
T 3i44_A 91 VEKILEIYEKRSSDMAKTISMEMGAPIDMALNAQTATGSSHIRNFIKAYKEFSFQEAL-IEGNEQAILHYDAIGVVGLIT 169 (497)
T ss_dssp HHHHHHHHHHTHHHHHHHHHHHHCCCHHHHHHTHHHHHHHHHHHHHHHHHHCCSEEES-STTCSSCEEEEEECCEEEEEC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHhhcccccccc-cCCceeEEEeecCceEEEEEC
Confidence 5789999999999999999999999999865489999999999998877654332211 124557788 99999999999
Q ss_pred CCCcChHhhHHHHHHHHhcCCeEEEecCCCChhHHHHHHHHHHHcCCCCCeEEEEcCCchhHHHHHHhCCCcCeEEEeCC
Q 015031 80 PWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGS 159 (414)
Q Consensus 80 p~n~P~~~~~~~~~~ALaaGN~vv~kps~~~~~~~~~l~~~~~~aglp~g~v~~~~~~~~~~~~~l~~~~~~~~v~~tGs 159 (414)
|||||+...++++++||++||+||+|||+.+|+++..+++++.++|+|+|++|++++++.++++.|+.||++|.|.||||
T Consensus 170 PwN~P~~~~~~~~a~ALaaGN~VVlKps~~tp~t~~~l~~l~~eaGlP~gvvnvv~g~~~~~g~~L~~hp~v~~I~FTGS 249 (497)
T 3i44_A 170 PWNWPMNQVTLKVIPALLAGCTMVLKPSEIAPLSAMLFAEILDEAALPSGVFNLINGDGANVGSYLSAHPDLEMISFTGS 249 (497)
T ss_dssp CSSSHHHHHHHHHHHHHHHTCEEEEECCTTSCHHHHHHHHHHHHTTCCTTSEEECCCCTTTHHHHHHHCTTCCEEEEESC
T ss_pred CCcchHHHHHHHHHHHHHcCCEEEEECCcccHHHHHHHHHHHHHhCcCCCeEEEEeCCChHHHHHHHhCCCcCEEEEeCc
Confidence 99999999999999999999999999999999999999999999999999999999988889999999999999999999
Q ss_pred HHHHHHHHHHHhhCCCCceeeeCCCCCceeecCCCCHHHHHHHHHHHHhcccCCccccCcEEEEeCccHHHHHHHHHHHH
Q 015031 160 TDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKA 239 (414)
Q Consensus 160 ~~~~~~i~~~~~~~~~~~~~~e~gG~~~~iV~~dadl~~a~~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f~~~l~~~~ 239 (414)
+.+|+.|.+.++ ++++|+++|+|||||+||++||| +.|++.+++++|.|+||.|++++|||||+++||+|+++|++++
T Consensus 250 ~~~G~~i~~~aa-~~~k~v~lElGGk~p~IV~~dAD-~~Aa~~i~~~~f~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~ 327 (497)
T 3i44_A 250 TRAGKDISKNAS-NTLKRVCLELGGKGANIIFADAD-IDALQRGVRHCFYNSGQSCNAPTRMLVEQAIYDKAIKTAKDIA 327 (497)
T ss_dssp HHHHHHHHHHHH-TTTCEEEEECCCCCEEEECTTSC-TTHHHHHHHHHHGGGGCCTTCCCEEEEEGGGHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHh-hcCCceeeccCCCCceEECCChh-HHHHHHHHHHHHhcCCCCcccCCEEEEcHHHHHHHHHHHHHHH
Confidence 999999999988 88999999999999999999999 9999999999999999999999999999999999999999999
Q ss_pred hccccCCCCCCCCCccccCCHHHHHHHHHHHHHhhhcCCeEeeCCc-ccC--CCCceeeeEEEEeCCCCCcccccccccc
Q 015031 240 KAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGK-PIG--KKGYYIEPTIFTNVTEDMLIAKNEIFGP 316 (414)
Q Consensus 240 ~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ga~v~~gg~-~~~--~~g~~~~Ptvl~~~~~~~~~~~~E~fgP 316 (414)
+++++|+|.|+++++||++++.+++++++++++++++|+++++||. ... ..|+|++|||+.+++++|++++||+|||
T Consensus 328 ~~~~vG~p~~~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~v~~gG~~~~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGP 407 (497)
T 3i44_A 328 EKTQVGPGHQTGNHIGPVVSKEQYDKIQDLIQSGIDEGATLVTGGTGLPMGMERGYYVRPTVFADVKPHMRIFREEIFGP 407 (497)
T ss_dssp HHCCBCCTTSCSSCBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCSSCCTTCCSSCCCCCEEEESCCTTSHHHHSCCCSS
T ss_pred HhccCCCCCCCCCccCCCcCHHHHHHHHHHHHHHHHCCCEEEECCCcCCCcCCCCcEECCEEEEeCCCCCHHHcCcccCc
Confidence 9999999999999999999999999999999999999999999994 322 2699999999999999999999999999
Q ss_pred eEEEeeeCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHHhccceeEEEECCcCCCCCCCCccCCCCCCCCCcchHHHHH
Q 015031 317 VMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSIRAGIIWINCYFAFDSDCPYGGYKMSGFGRDCGLESLH 396 (414)
Q Consensus 317 vl~v~~~~~~~eai~~~n~~~~gl~~sv~s~d~~~~~~~~~~l~~g~v~vN~~~~~~~~~pfgG~~~sG~g~~~g~~~~~ 396 (414)
|++|++|+|+||||+++|+++|||++||||+|.+.++++++++++|+|+||. ....+.+||||+|.||+|+++|.+|++
T Consensus 408 Vl~v~~~~~~deAi~~aN~~~~GL~a~v~t~d~~~a~~~a~~l~aG~V~iN~-~~~~~~~PfGG~k~SG~Gr~~G~~gl~ 486 (497)
T 3i44_A 408 VLSLLPFNTEDEAVTLANDTEYGLTNYIQSQDRSKCRRIAAQVRSGMVEVNG-HELPGGSYFGGVKFSGRAREGGLWGIK 486 (497)
T ss_dssp EEEEEEESSHHHHHHHHHCSSCCSEEEEECSCHHHHHHHHHHSCCSEEEETT-CCCCTTCCBCCSGGGCCCCBSHHHHHH
T ss_pred eEEEEecCCHHHHHHHHhCCCCCcEEEEECCCHHHHHHHHHhCCcCeEEECC-CCCCCCCCcCCcCcCcCCccchHHHHH
Confidence 9999999999999999999999999999999999999999999999999995 445678999999999999999999999
Q ss_pred hhhcccEEEE
Q 015031 397 NYLQVKSVVT 406 (414)
Q Consensus 397 ~~~~~k~i~~ 406 (414)
+||+.|+|+.
T Consensus 487 ~~t~~K~v~~ 496 (497)
T 3i44_A 487 EFLDTKAISY 496 (497)
T ss_dssp TTEEEEEESC
T ss_pred HhcceeEEEe
Confidence 9999999753
|
| >4e4g_A Methylmalonate-semialdehyde dehydrogenase; structural genomics, protein structure INI nysgrc, PSI-biology; 2.90A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.7e-90 Score=706.11 Aligned_cols=406 Identities=31% Similarity=0.468 Sum_probs=381.5
Q ss_pred CHHHHHHHHHhHHHHHHHHHHHcCCChHHHhhccHHHHHHHHHHHHHhhhhhcCceecc-ccCccccccccCCcEEEEEc
Q 015031 1 MLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKM-SRALQGYTLREPIGVVGHII 79 (414)
Q Consensus 1 L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~~~~~~~~~~~~-~~~~~~~~~~~P~Gvv~~i~ 79 (414)
|+++++.|++|+++|++++++|+|||..++ ..|+..+++.+++++.+.+...+...+. ..+...+.+++|+|||++|+
T Consensus 92 L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea-~~Ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVV~~I~ 170 (521)
T 4e4g_A 92 FMKFVQLLNDNMNELAEMLSREHGKTIDDA-KGDIVRGLEVCEFVIGIPHLQKSEFTEGAGPGIDMYSIRQPVGIGAGIT 170 (521)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHCSCHHHH-HHHHHHHHHHHHHHHTHHHHTCEEEEEEEETTEEEEEEEEECCEEEEEC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCCHHHH-HHHHHHHHHHHHHHHHHHHHhcCcccccCCCCcceeEEEcCCcEEEEEC
Confidence 578999999999999999999999999975 5799999999999998776665543322 24556788999999999999
Q ss_pred CCCcChHhhHHHHHHHHhcCCeEEEecCCCChhHHHHHHHHHHHcCCCCCeEEEEcCCchhHHHHHHhCCCcCeEEEeCC
Q 015031 80 PWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGS 159 (414)
Q Consensus 80 p~n~P~~~~~~~~~~ALaaGN~vv~kps~~~~~~~~~l~~~~~~aglp~g~v~~~~~~~~~~~~~l~~~~~~~~v~~tGs 159 (414)
|||||+...++++++||++||+||+|||+.+|.++..+++++.++|+|+|++|+++|+ .+.++.|+.||++|.|.||||
T Consensus 171 PwN~P~~~~~~~~a~ALaaGN~VVlKpse~tp~t~~~l~~l~~eaGlP~gvv~vv~g~-~~~~~~L~~~p~vd~I~FTGS 249 (521)
T 4e4g_A 171 PFNFPGMIPMWMFAPAIACGNAFILKPSERDPSVPIRLAELMIEAGLPAGILNVVNGD-KGAVDAILTHPDIAAVSFVGS 249 (521)
T ss_dssp CSSCTTHHHHHHHHHHHHTTCEEEEECCTTSTHHHHHHHHHHHHTTCCTTSEEECCCC-HHHHHHHHTCTTCCEEEEESC
T ss_pred CCcchHHHHHHHHHHHHHcCCEEEEECCCcchHHHHHHHHHHHHhCCCcCeEEEEeCC-hHHHHHHHhCCCcCEEEEECC
Confidence 9999999999999999999999999999999999999999999999999999999994 566799999999999999999
Q ss_pred HHHHHHHHHHHhhCCCCceeeeCCCCCceeecCCCCHHHHHHHHHHHHhcccCCccccCcEEEEeCc-cHHHHHHHHHHH
Q 015031 160 TDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEG-IYDEFEKKLVEK 238 (414)
Q Consensus 160 ~~~~~~i~~~~~~~~~~~~~~e~gG~~~~iV~~dadl~~a~~~i~~~~~~~~Gq~C~a~~~v~V~~~-~~~~f~~~l~~~ 238 (414)
+.+|+.|.+.++ ++++|+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|+|||++ ++|+|+++|+++
T Consensus 250 ~~vG~~i~~~aa-~~lkpv~lELGGk~p~IV~~dADl~~Aa~~i~~~~f~n~GQ~C~a~~rvlV~~~~i~d~f~~~l~~~ 328 (521)
T 4e4g_A 250 TPIARYVYGTAA-MNGKRAQCFGGAKNHMIIMPDADLDQAANALIGAGYGSAGERCMAISVAVPVGEETANRLIDKLVPM 328 (521)
T ss_dssp HHHHHHHHHHHH-HTTCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCCTTSEEEEEEBSHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHh-hcCCCeeecCCCCCeEEEcCCCCHHHHHHHHHHHHHhCCCCCcccCeEEEEeCchHHHHHHHHHHHH
Confidence 999999999987 789999999999999999999999999999999999999999999999999999 999999999999
Q ss_pred HhccccCCCCCCCCCccccCCHHHHHHHHHHHHHhhhcCCeEeeCCccc----CCCCceeeeEEEEeCCCCCcccccccc
Q 015031 239 AKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPI----GKKGYYIEPTIFTNVTEDMLIAKNEIF 314 (414)
Q Consensus 239 ~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ga~v~~gg~~~----~~~g~~~~Ptvl~~~~~~~~~~~~E~f 314 (414)
++++++|+|.++++++||+++..+++++++++++++++|+++++||... ..+|+|++|||+.+++++|++++||+|
T Consensus 329 ~~~~~vG~~~~~~~~~gpli~~~~~~rv~~~i~~a~~~Ga~v~~gG~~~~~~~~~~g~~~~PTvl~~v~~~~~i~~eEiF 408 (521)
T 4e4g_A 329 VESLRIGPYTDEKADMGPVVTKEAEQRIRSLIDSGIEQGAKLVVDGRDFKLQGYENGHFIGGCLFDDVTPDMDIYKTEIF 408 (521)
T ss_dssp HHTCCBCCTTCTTCSBCCCSCHHHHHHHHHHHHHHHHHTCEEEECCSSCCCTTCTTSCCCCCEEEESCCTTSHHHHSCCC
T ss_pred HHhccCCCCCCccCccCCCCCHHHHHHHHHHHHHHHHCCCEEEecCcccCCCcCCCCcEECCEEEEcCCCCCHhhcCccc
Confidence 9999999999999999999999999999999999999999999999753 247999999999999999999999999
Q ss_pred cceEEEeeeCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHHhccceeEEEECCcCCC-CCCCCccCCCCCCCC--Ccch
Q 015031 315 GPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSIRAGIIWINCYFAF-DSDCPYGGYKMSGFG--RDCG 391 (414)
Q Consensus 315 gPvl~v~~~~~~~eai~~~n~~~~gl~~sv~s~d~~~~~~~~~~l~~g~v~vN~~~~~-~~~~pfgG~~~sG~g--~~~g 391 (414)
|||++|++|+|+||||+++|+++|||++||||+|.+.++++++++++|+|+||++... .+.+||||+|.||+| +++|
T Consensus 409 GPVl~v~~~~~~deAi~~aN~~~~gLaa~v~t~d~~~a~~~~~~l~aG~V~vN~~~~~~~~~~PfGG~k~SG~G~~~~~G 488 (521)
T 4e4g_A 409 GPVLSVVRARNYEEALSLPMKHEYGNGVAIYTRDGDAARDFASRINIGMVGVNVPIPVPLAYHSFGGWKSSSFGDLNQHG 488 (521)
T ss_dssp SSEEEECCBSSHHHHHHHHHHSSEESEEEEECSBHHHHHHHHHHCCCSEEEESCSSCCCCTTSCBCCEETTEESSCCBSH
T ss_pred CcEEEEEEeCCHHHHHHHHhcCCCCeEEEEECCCHHHHHHHHHhCCeeeEEECCCCCCCCCCCCcCCcccCCCCCCccch
Confidence 9999999999999999999999999999999999999999999999999999998654 478999999999999 7899
Q ss_pred HHHHHhhhcccEEEEeCC
Q 015031 392 LESLHNYLQVKSVVTPIF 409 (414)
Q Consensus 392 ~~~~~~~~~~k~i~~~~~ 409 (414)
++|+++||+.|+|+.++.
T Consensus 489 ~~gl~~ft~~K~v~~~~~ 506 (521)
T 4e4g_A 489 TDSIKFWTRTKTITSRWP 506 (521)
T ss_dssp HHHHHHTEEEEEEEECCC
T ss_pred HHHHHHhheEEEEEEecC
Confidence 999999999999998764
|
| >3pqa_A Lactaldehyde dehydrogenase; structural genomics, protein structure initiative, nysgrc, P biology, oxidoreductase; 1.50A {Methanocaldococcus jannaschii} PDB: 3rhd_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.8e-90 Score=700.11 Aligned_cols=399 Identities=32% Similarity=0.552 Sum_probs=378.6
Q ss_pred CHHHHHHHHHhHHHHHHHHHHHcCCChHHHhhccHHHHHHHHHHHHHhhhhhcCceeccccCccccccccCCcEEEEEcC
Q 015031 1 MLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMSRALQGYTLREPIGVVGHIIP 80 (414)
Q Consensus 1 L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p 80 (414)
|+++++.|++|+++|++++++|+|||..++ ..|+..+++.+++++.++++..+...+.+ +...+.+++|+|||++|+|
T Consensus 62 L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea-~~Ev~~~~~~~~~~a~~~~~~~~~~~~~~-~~~~~~~~~P~GVv~~I~P 139 (486)
T 3pqa_A 62 LMNIAKQIKEKKEELAKILAIDAGKPIKQA-RVEVERSIGTFKLAAFYVKEHRDEVIPSD-DRLIFTRREPVGIVGAITP 139 (486)
T ss_dssp HHHHHHHHHHTHHHHHHHHHHHHCCCHHHH-HHHHHHHHHHHHHHHHHHHHCCEEEECCT-TEEEEEEEEECSEEEEEEC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCCHHHH-HHHHHHHHHHHHHHHHHHHHhcCceecCC-CceeEEEEccccEEEEECC
Confidence 578999999999999999999999999975 57999999999999999887765544432 5578899999999999999
Q ss_pred CCcChHhhHHHHHHHHhcCCeEEEecCCCChhHHHHHHHHHHHc----CCCCCeEEEEcCCchhHHHHHHhCCCcCeEEE
Q 015031 81 WNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLA----GVPDGVLNVVPGFGPTAGAAIASHMDIDKVSF 156 (414)
Q Consensus 81 ~n~P~~~~~~~~~~ALaaGN~vv~kps~~~~~~~~~l~~~~~~a----glp~g~v~~~~~~~~~~~~~l~~~~~~~~v~~ 156 (414)
||||+...++++++||++||+||+|||+.+|.++..+++++.++ |+|+|++|+++|++.++++.|+.||++|.|.|
T Consensus 140 wN~P~~~~~~~~~~ALaaGN~VVlKps~~tp~t~~~l~~l~~~al~~~GlP~gvv~vv~g~~~~~g~~L~~~p~vd~V~f 219 (486)
T 3pqa_A 140 FNFPLNLSAHKIAPAIATGNVIVHHPSSKAPLVCIELAKIIENALKKYNVPLGVYNLLTGAGEVVGDEIVVNEKVNMISF 219 (486)
T ss_dssp SSSHHHHHHHHHHHHHHTTCEEEEEECTTSCHHHHHHHHHHHHHHHHTTCCGGGEEECCSCTTTHHHHHHHCTTCCEEEE
T ss_pred CchHHHHHHHHHHHHHHcCCEEEEECCCCchHHHHHHHHHHHHHHHhcCCCCCeEEEEeCCchHHHHHHHhCCCccEEEE
Confidence 99999999999999999999999999999999999999999999 99999999999988888999999999999999
Q ss_pred eCCHHHHHHHHHHHhhCCCCceeeeCCCCCceeecCCCCHHHHHHHHHHHHhcccCCccccCcEEEEeCccHHHHHHHHH
Q 015031 157 TGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLV 236 (414)
Q Consensus 157 tGs~~~~~~i~~~~~~~~~~~~~~e~gG~~~~iV~~dadl~~a~~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f~~~l~ 236 (414)
|||+.+|+.|.+.++ ++|+++|+|||||+||++|||++.|++.+++++|.|+||.|+++++||||++++|+|+++|+
T Consensus 220 TGS~~~g~~i~~~aa---~~~v~lELGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~ 296 (486)
T 3pqa_A 220 TGSSKVGELITKKAG---FKKIALELGGVNPNIVLKDADLNKAVNALIKGSFIYAGQVCISVGMILVDESIADKFIEMFV 296 (486)
T ss_dssp ESCHHHHHHHHHHCC---SSEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCSTTSEEEEEEEGGGHHHHHHHHH
T ss_pred ECChHHHHHHHHHcC---CCceeeccCCcCcEEEcCCCCHHHHHHHHHHHHHhcCCCCccCCcEEEEeHHHHHHHHHHHH
Confidence 999999999998864 89999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhccccCCCCCCCCCccccCCHHHHHHHHHHHHHhhhcCCeEeeCCcccCCCCceeeeEEEEeCCCCCcccccccccc
Q 015031 237 EKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIGKKGYYIEPTIFTNVTEDMLIAKNEIFGP 316 (414)
Q Consensus 237 ~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgP 316 (414)
++++++++|+|.|+++++||+++..+++++++++++++++|+++++||.. .|+|++|||+ +++++|++++||+|||
T Consensus 297 ~~~~~~~~g~p~~~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~v~~gG~~---~g~~~~Ptvl-~v~~~~~i~~eEiFGP 372 (486)
T 3pqa_A 297 NKAKVLNVGNPLDEKTDVGPLISVEHAEWVEKVVEKAIDEGGKLLLGGKR---DKALFYPTIL-EVDRDNILCKTETFAP 372 (486)
T ss_dssp HHHHTCCBSCTTSTTCSBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCCE---ETTEECCEEE-ECCTTSGGGTCCCCSS
T ss_pred HHHHhcccCCCCcCCCCcCCCCCHHHHHHHHHHHHHHHHCCCEEEecCCC---CCcEeccEEE-eCCCCChhhccccccc
Confidence 99999999999999999999999999999999999999999999999975 6899999999 9999999999999999
Q ss_pred eEEEeeeCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHHhccceeEEEECCcCCC-CCCCCccCCCCCCCCCcchHHHH
Q 015031 317 VMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSIRAGIIWINCYFAF-DSDCPYGGYKMSGFGRDCGLESL 395 (414)
Q Consensus 317 vl~v~~~~~~~eai~~~n~~~~gl~~sv~s~d~~~~~~~~~~l~~g~v~vN~~~~~-~~~~pfgG~~~sG~g~~~g~~~~ 395 (414)
|++|++|+| ||||+++|+++|||++||||+|.+.++++++++++|+|+||+++.+ .+.+||||+|.||+|+++|.+|+
T Consensus 373 Vl~v~~~~~-deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~v~vN~~~~~~~~~~PfGG~k~SG~Gr~~g~~gl 451 (486)
T 3pqa_A 373 VIPIIRTNE-EEMIDIANSTEYGLHSAIFTNDINKSLKFAENLEFGGVVINDSSLFRQDNMPFGGVKKSGLGREGVKYAM 451 (486)
T ss_dssp EEEEEEECH-HHHHHHHTCSSCCSEEEEECSBHHHHHHHHHHSCSSEEEESSCTTCCCTTSCBCCSGGGEESCBSHHHHH
T ss_pred EEEEEEEcH-HHHHHHHhcCCCCcEEEEECCCHHHHHHHHHhCCcceEEEeCCCCcCCCCCCCCCcCcCcCCCCCcHHHH
Confidence 999999999 9999999999999999999999999999999999999999998653 35899999999999999999999
Q ss_pred HhhhcccEEEEeCC
Q 015031 396 HNYLQVKSVVTPIF 409 (414)
Q Consensus 396 ~~~~~~k~i~~~~~ 409 (414)
++|++.|+|+++..
T Consensus 452 ~~f~~~k~v~~~~~ 465 (486)
T 3pqa_A 452 EEMSNIKTIIISKA 465 (486)
T ss_dssp HHTEEEEEEEEEC-
T ss_pred HHhhceEEEEEcCC
Confidence 99999999988653
|
| >3etf_A Putative succinate-semialdehyde dehydrogenase; center for ST genomics of infectious diseases, oxidoreductase, csgid; 1.85A {Salmonella typhimurium} PDB: 3efv_A | Back alignment and structure |
|---|
Probab=100.00 E-value=6.4e-90 Score=697.19 Aligned_cols=404 Identities=30% Similarity=0.478 Sum_probs=383.8
Q ss_pred CHHHHHHHHHhHHHHHHHHHHHcCCChHHHhhccHHHHHHHHHHHHHhhhhhcCceeccccCccccccccCCcEEEEEcC
Q 015031 1 MLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMSRALQGYTLREPIGVVGHIIP 80 (414)
Q Consensus 1 L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p 80 (414)
|+++++.|++|+++|++++++|+|||..++ ..|+..+++.+++++.++++..+.......+...+.+++|+|||++|+|
T Consensus 57 L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a-~~ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~P 135 (462)
T 3etf_A 57 LRDIGQALRAHAEEMAQCITREMGKPIKQA-RAEVTKSAALCDWYAEHGPAMLNPEPTLVENQQAVIEYRPLGVILAIMP 135 (462)
T ss_dssp HHHHHHHHHHTHHHHHHHHHHHHCCCHHHH-HHHHHHHHHHHHHHHHHHHHHTSCEECSSGGGCEEEEEEECSEEEEECC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCCHHHH-HHHHHHHHHHHHHHHHhHHHhcCCcccCCCCceeEEEeecCcEEEEECC
Confidence 578999999999999999999999999975 5799999999999999887766554222245567889999999999999
Q ss_pred CCcChHhhHHHHHHHHhcCCeEEEecCCCChhHHHHHHHHHHHcCCCCCeEEEEcCCchhHHHHHHhCCCcCeEEEeCCH
Q 015031 81 WNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGST 160 (414)
Q Consensus 81 ~n~P~~~~~~~~~~ALaaGN~vv~kps~~~~~~~~~l~~~~~~aglp~g~v~~~~~~~~~~~~~l~~~~~~~~v~~tGs~ 160 (414)
||||+...++++++||++||+||+|||+.+|.++..+.+++.++|+|+|++|++++ +.+.+..|+.||++|.|.||||+
T Consensus 136 wN~P~~~~~~~~~~ALaaGN~VvlKps~~tp~~~~~l~~~l~~aglP~gv~~vv~g-~~~~~~~l~~~~~v~~v~fTGS~ 214 (462)
T 3etf_A 136 WNFPLWQVLRGAVPILLAGNSYLLKHAPNVTGCAQMIARILAEAGTPAGVYGWVNA-NNEGVSQMINDPRIAAVTVTGSV 214 (462)
T ss_dssp SSSTTHHHHHHHHHHHHTTCEEEEECCTTCHHHHHHHHHHHHHTTCCBTTEEECCC-CHHHHHHHHTSTTEEEEEEESCH
T ss_pred CchHHHHHHHHHHHHHhcCCEEEEECCCCCcHHHHHHHHHHHHhCCCcCeEEEEEC-CHHHHHHHhcCCCCCEEEEeCCc
Confidence 99999999999999999999999999999999999999999999999999999998 55778999999999999999999
Q ss_pred HHHHHHHHHHhhCCCCceeeeCCCCCceeecCCCCHHHHHHHHHHHHhcccCCccccCcEEEEeCccHHHHHHHHHHHHh
Q 015031 161 DVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAK 240 (414)
Q Consensus 161 ~~~~~i~~~~~~~~~~~~~~e~gG~~~~iV~~dadl~~a~~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f~~~l~~~~~ 240 (414)
.+|+.|.+.++ ++.+|+++|+|||||+||++|||++.|++.+++++|.|+||.|+++++||||++++|+|+++|+++++
T Consensus 215 ~~g~~i~~~aa-~~~~~v~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~ 293 (462)
T 3etf_A 215 RAGAAIGAQAG-AALKKCVLELGGSDPFIVLNDADLELAVKAAVAGRYQNTGQVCAAAKRFIVEEGIAQAFTDRFVAAAA 293 (462)
T ss_dssp HHHHHHHHHHH-HTTCCEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCCTTCEEEEEEEHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHh-ccCCceEEEcCCCCccEECCCCCHHHHHHHHHHHHHhcCCCcccCCcEEEEehhHHHHHHHHHHHHHH
Confidence 99999999988 78899999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccCCCCCCCCCccccCCHHHHHHHHHHHHHhhhcCCeEeeCCcccCCCCceeeeEEEEeCCCCCcccccccccceEEE
Q 015031 241 AWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIGKKGYYIEPTIFTNVTEDMLIAKNEIFGPVMAL 320 (414)
Q Consensus 241 ~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v 320 (414)
++++|+|.++++++||+++..+++++++++++++++|+++++||...+..|+|++|||+.+++++|++++||+||||++|
T Consensus 294 ~~~~G~p~~~~~~~gpli~~~~~~~v~~~i~~a~~~ga~~~~gg~~~~~~g~~~~Ptvl~~v~~~~~~~~eE~FGPVl~v 373 (462)
T 3etf_A 294 ALKMGDPLVEENDLGPMARFDLRDELHQQVQASVAEGARLLLGGEKIAGEGNYYAATVLADVTPDMTAFRQELFGPVAAI 373 (462)
T ss_dssp HCCBSCTTSTTCSBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCSBCSSSSCCBCCEEEESCCTTSHHHHSCCCSSEEEE
T ss_pred hhcCCCCccccCcccCCCCHHHHHHHHHHHHHHHHCCCEEEeCCcccCCCCcEEeeEEEECCCCCChhhcCceeCcEEEE
Confidence 99999999999999999999999999999999999999999999866568999999999999999999999999999999
Q ss_pred eeeCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHHhccceeEEEECCcCCCCCCCCccCCCCCCCCCcchHHHHHhhhc
Q 015031 321 MKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSIRAGIIWINCYFAFDSDCPYGGYKMSGFGRDCGLESLHNYLQ 400 (414)
Q Consensus 321 ~~~~~~~eai~~~n~~~~gl~~sv~s~d~~~~~~~~~~l~~g~v~vN~~~~~~~~~pfgG~~~sG~g~~~g~~~~~~~~~ 400 (414)
++|+|+||||+++|+++|||+++|||+|.+.++++++++++|+|+||++....+.+||||+|.||+|+++|.+|+++||+
T Consensus 374 ~~~~~~deAi~~an~~~~gL~a~v~t~d~~~a~~~~~~l~aG~v~vN~~~~~~~~~PfGG~k~SG~G~~~g~~g~~~~~~ 453 (462)
T 3etf_A 374 TVAKDAAHALALANDSEFGLSATIFTADDTLAAEMAARLECGGVFINGYSASDARVAFGGVKKSGFGRELSHFGLHEFCN 453 (462)
T ss_dssp EEESSHHHHHHHHHCSSCCSCEEEECSCHHHHHHHHHHCCSSEEEESSCCCCCTTSCBCCSGGGEECCBSHHHHHHTTEE
T ss_pred EEcCCHHHHHHHHhCCCCCceEEEECCCHHHHHHHHHhCCcceEEECCCCCCCCCCCcCCcCCCCCCccchHHHHHHHhc
Confidence 99999999999999999999999999999999999999999999999988777899999999999999999999999999
Q ss_pred ccEEEEe
Q 015031 401 VKSVVTP 407 (414)
Q Consensus 401 ~k~i~~~ 407 (414)
.|+|+++
T Consensus 454 ~k~v~~~ 460 (462)
T 3etf_A 454 VQTVWKN 460 (462)
T ss_dssp EEEEEEC
T ss_pred eeEEEEe
Confidence 9999875
|
| >2w8n_A Succinate-semialdehyde dehydrogenase, mitochondrial; mitochondrion, oxidoreductase, transit peptide, disease mutation, SSA, NAD, ssadh; 2.00A {Homo sapiens} PDB: 2w8o_A 2w8p_A 2w8q_A 2w8r_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.3e-90 Score=702.96 Aligned_cols=404 Identities=37% Similarity=0.632 Sum_probs=383.4
Q ss_pred CHHHHHHHHHhHHHHHHHHHHHcCCChHHHhhccHHHHHHHHHHHHHhhhhhcCceecc-ccCccccccccCCcEEEEEc
Q 015031 1 MLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKM-SRALQGYTLREPIGVVGHII 79 (414)
Q Consensus 1 L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~~~~~~~~~~~~-~~~~~~~~~~~P~Gvv~~i~ 79 (414)
|+++++.|++|+++|++++++|+|||..++ ..|+..+++.++++++++++..+...+. ..+...+.+++|+|||++|+
T Consensus 76 L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea-~~ev~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~~P~GVv~~I~ 154 (487)
T 2w8n_A 76 LRKWYNLMIQNKDDLARIITAESGKPLKEA-HGEILYSAFFLEWFSEEARRVYGDIIHTPAKDRRALVLKQPIGVAAVIT 154 (487)
T ss_dssp HHHHHHHHHHTHHHHHHHHHHHHCCCHHHH-HHHHHHHHHHHHHHHHHGGGCCCEEECCSCTTCEEEEEEEECCEEEEEC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCCHHHH-HHHHHHHHHHHHHHHHHHHHhcCcccccCCCCceeEEEEecceEEEEEC
Confidence 578999999999999999999999999976 4699999999999999887766654443 23456788999999999999
Q ss_pred CCCcChHhhHHHHHHHHhcCCeEEEecCCCChhHHHHHHHHHHHcCCCCCeEEEEc---CCchhHHHHHHhCCCcCeEEE
Q 015031 80 PWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVP---GFGPTAGAAIASHMDIDKVSF 156 (414)
Q Consensus 80 p~n~P~~~~~~~~~~ALaaGN~vv~kps~~~~~~~~~l~~~~~~aglp~g~v~~~~---~~~~~~~~~l~~~~~~~~v~~ 156 (414)
|||||+...++++++||++||+||+|||+.+|.++..|++++.++|+|+|++|+++ |++.+.++.|+.||++|.|.|
T Consensus 155 PwN~P~~~~~~~~~~ALaaGN~VVlKps~~tp~t~~~l~~l~~~aGlP~gvv~vv~~~~g~~~~~~~~L~~~~~v~~V~f 234 (487)
T 2w8n_A 155 PWNFPSAMITRKVGAALAAGCTVVVKPAEDTPFSALALAELASQAGIPSGVYNVIPCSRKNAKEVGEAICTDPLVSKISF 234 (487)
T ss_dssp CSSSTTHHHHHHHHHHHHHTCEEEEECCTTCCHHHHHHHHHHHHHTCCTTSEEECCCCHHHHHHHHHHHTTCTTEEEEEE
T ss_pred CCcchHHHHHHHHHHHHHcCCEEEEECCCcchHHHHHHHHHHHHhCCCCCeEEEEecCCCCcHHHHHHHHhCCCcCEEEE
Confidence 99999999999999999999999999999999999999999999999999999999 867788999999999999999
Q ss_pred eCCHHHHHHHHHHHhhCCCCceeeeCCCCCceeecCCCCHHHHHHHHHHHHhcccCCccccCcEEEEeCccHHHHHHHHH
Q 015031 157 TGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLV 236 (414)
Q Consensus 157 tGs~~~~~~i~~~~~~~~~~~~~~e~gG~~~~iV~~dadl~~a~~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f~~~l~ 236 (414)
|||+.+|+.|.+.++ ++++|+++|+|||||+||++|||++.|++.+++++|.|+||.|+++++||||++++|+|+++|+
T Consensus 235 TGS~~~g~~i~~~aa-~~~~pv~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~ 313 (487)
T 2w8n_A 235 TGSTTTGKILLHHAA-NSVKRVSMELGGLAPFIVFDSANVDQAVAGAMASKFRNTGQTCVCSNQFLVQRGIHDAFVKAFA 313 (487)
T ss_dssp EECHHHHHHHHHHHH-TTTCEEEEEECEEEEEEECTTSCHHHHHHHHHHHHTCCCSCCCSEEEEEEEEHHHHHHHHHHHH
T ss_pred eCCHHHHHHHHHHHh-ccCCcEEEecCCCCeEEECCCCCHHHHHHHHHHHHHhCCCCccccCCEEEEcccHHHHHHHHHH
Confidence 999999999999988 8899999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhc-cccCCCCCCCCCccccCCHHHHHHHHHHHHHhhhcCCeEeeCCcccCCCCc-eeeeEEEEeCCCCCcccccccc
Q 015031 237 EKAKA-WVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIGKKGY-YIEPTIFTNVTEDMLIAKNEIF 314 (414)
Q Consensus 237 ~~~~~-~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~~~g~-~~~Ptvl~~~~~~~~~~~~E~f 314 (414)
+++++ +++|+|.++++++||+++..+++++++++++++++|+++++||+... .|+ |++|||+.+++++|++++||+|
T Consensus 314 ~~~~~~~~~G~p~~~~~~~gpli~~~~~~rv~~~i~~a~~~Ga~~~~gg~~~~-~g~~~~~Ptvl~~v~~~~~i~~eEiF 392 (487)
T 2w8n_A 314 EAMKKNLRVGNGFEEGTTQGPLINEKAVEKVEKQVNDAVSKGATVVTGGKRHQ-LGKNFFEPTLLCNVTQDMLCTHEETF 392 (487)
T ss_dssp HHHHHHCCBSCTTSTTCCBCCCSSHHHHHHHHHHHHHHHTTTCEEEECCSBCT-TCTTCBCCEEEEEECGGGGTTCTTCC
T ss_pred HHHHhhcccCCcccccCcccCCCCHHHHHHHHHHHHHHHHCCCEEEeCCccCC-CCCceECCEEEecCCCcchhhhcccc
Confidence 99999 99999999999999999999999999999999999999999998643 688 9999999999999999999999
Q ss_pred cceEEEeeeCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHHhccceeEEEECCcCCCCCCCCccCCCCCCCCCcchHHH
Q 015031 315 GPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSIRAGIIWINCYFAFDSDCPYGGYKMSGFGRDCGLES 394 (414)
Q Consensus 315 gPvl~v~~~~~~~eai~~~n~~~~gl~~sv~s~d~~~~~~~~~~l~~g~v~vN~~~~~~~~~pfgG~~~sG~g~~~g~~~ 394 (414)
|||++|++|+|+||||+++|+++|||++||||+|.+.++++++++++|+|+||++....+.+||||+|.||+|+++|.+|
T Consensus 393 GPVl~v~~~~~~~eAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~v~vN~~~~~~~~~PfGG~~~SG~G~~~G~~~ 472 (487)
T 2w8n_A 393 GPLAPVIKFDTEEEAIAIANAADVGLAGYFYSQDPAQIWRVAEQLEVGMVGVNEGLISSVECPFGGVKQSGLGREGSKYG 472 (487)
T ss_dssp SSEEEEEEESCHHHHHHHHTCTTCCSEEEEECCCHHHHHHHHHHSCSSEEEESCSCCCCTTSCBCCSGGGEESCBSTTTG
T ss_pred cceEEEEEeCCHHHHHHHHhCCCCCceEEEeCCCHHHHHHHHHhCCeeeEEEcCCCCCCCCCCCCCCCCCCcCCCchHHH
Confidence 99999999999999999999999999999999999999999999999999999987777789999999999999999999
Q ss_pred HHhhhcccEEEEe
Q 015031 395 LHNYLQVKSVVTP 407 (414)
Q Consensus 395 ~~~~~~~k~i~~~ 407 (414)
+++|++.|+|+.+
T Consensus 473 l~~f~~~k~v~~~ 485 (487)
T 2w8n_A 473 IDEYLELKYVCYG 485 (487)
T ss_dssp GGGGEEEEEEEEC
T ss_pred HHHhcCccEEEEe
Confidence 9999999999764
|
| >3r64_A NAD dependent benzaldehyde dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.57A {Corynebacterium glutamicum} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-89 Score=701.22 Aligned_cols=403 Identities=34% Similarity=0.552 Sum_probs=366.2
Q ss_pred CHHHHHHHHHhHHHHHHHHHHHcCCChHHHhhccHHHHHHHHHHHHHhhhhhcCceeccc--cCccccccccCCcEEEEE
Q 015031 1 MLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMS--RALQGYTLREPIGVVGHI 78 (414)
Q Consensus 1 L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~--~~~~~~~~~~P~Gvv~~i 78 (414)
|+++++.|++|+++|++++++|+|||..++ ..|+..+++.+++++.++++..+ ..+.. .+...+.+++|+|||++|
T Consensus 78 L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a-~~Ev~~~~~~~~~~a~~~~~~~~-~~~~~~~~~~~~~~~~~P~GVv~~I 155 (508)
T 3r64_A 78 IYRAAELLEEHREEIVEWLIKESGSTRSKA-NLEITLAGNITKESASFPGRVHG-RISPSNTPGKENRVYRVAKGVVGVI 155 (508)
T ss_dssp HHHHHHHHHHTHHHHHHHHHHTSCCCHHHH-HHHHHHHHHHHHHHTTSTTTCCE-EEECCSSTTEEEEEEEEECSEEEEE
T ss_pred HHHHHHHHHHhHHHHHHHHHHHcCCCHHHH-HHHHHHHHHHHHHHHHHhhhhcC-cccccCCCCceeEEEEecceEEEEE
Confidence 578999999999999999999999999976 46999999999999988876555 44322 346788999999999999
Q ss_pred cCCCcChHhhHHHHHHHHhcCCeEEEecCCCChhHH-HHHHHHHHHcCCCCCeEEEEcCCchhHHHHHHhCCCcCeEEEe
Q 015031 79 IPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIA-LYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFT 157 (414)
Q Consensus 79 ~p~n~P~~~~~~~~~~ALaaGN~vv~kps~~~~~~~-~~l~~~~~~aglp~g~v~~~~~~~~~~~~~l~~~~~~~~v~~t 157 (414)
+|||||+...++++++||++||+||+|||+.+|.++ ..+.+++.++|+|+|++|+++|++.+.++.|+.||++|.|.||
T Consensus 156 ~PwN~P~~~~~~~~~~ALaaGN~VVlKps~~tp~t~~~~l~~ll~~aGlP~gvv~vv~g~~~~~g~~L~~~p~vd~I~fT 235 (508)
T 3r64_A 156 SPWNFPLNLSIRSVAPALAVGNAVVIKPASDTPVTGGVIPARIFEEAGVPAGVISTVAGAGSEIGDHFVTHAVPKLISFT 235 (508)
T ss_dssp CCSSSHHHHHHHHHHHHHHTTCEEEEECCTTCHHHHTHHHHHHHHTTTCCTTTEEECCCCTTTTHHHHHHCSSCSEEEEE
T ss_pred CCCcchHHHHHHHHHHHHhcCCEEEEECCCCChHHHHHHHHHHHHHhCcCcCeEEEEeCCCHHHHHHHhhCCCccEEEEE
Confidence 999999999999999999999999999999999999 9999999999999999999999878899999999999999999
Q ss_pred CCHHHHHHHHHHHhhC--CCCceeeeCCCCCceeecCCCCHHHHHHHHHHHHhcccCCccccCcEEEEeCccHHHHHHHH
Q 015031 158 GSTDVGRQVMQAAATS--NLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKL 235 (414)
Q Consensus 158 Gs~~~~~~i~~~~~~~--~~~~~~~e~gG~~~~iV~~dadl~~a~~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f~~~l 235 (414)
||+.+|+.|.+.++ + +++|+++|+|||||+||++|||++.|++.+++++|.|+||.|+++++||||++++|+|+++|
T Consensus 236 GS~~~g~~i~~~aa-~~~~l~~v~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l 314 (508)
T 3r64_A 236 GSTPVGRRVGELAI-NGGPMKTVALELGGNAPFVVLADADIDAAAQAAAVGAFLHQGQICMSINRVIVDAAVHDEFLEKF 314 (508)
T ss_dssp SCHHHHHHHHHHHH-SSSSCCEEEEECCCCCEEEECTTSCHHHHHHHHHHHHHTSTTCTTTCCSEEEEEHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHhh-cccCCCceEeecCCcCceEECCCCCHHHHHHHHHHHHHhcCCCCcccCcEEEEehhHHHHHHHHH
Confidence 99999999999987 6 78999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhccccCCCCCCCCCccccCCHHHHHHHHHHHHHhhhcCCeEeeCCcccCCCCceeeeEEEEeCCCCCccccccccc
Q 015031 236 VEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIGKKGYYIEPTIFTNVTEDMLIAKNEIFG 315 (414)
Q Consensus 236 ~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fg 315 (414)
+++++++++|+|.++++++||++++.+++++++++++++++|+++++||.. .|+|+.|||+.+++++|++++||+||
T Consensus 315 ~~~~~~~~~G~p~~~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~v~~gG~~---~g~~~~Ptvl~~v~~~~~i~~eEiFG 391 (508)
T 3r64_A 315 VEAVKNIPTGDPSAEGTLVGPVINDSQLSGLKEKIELAKKEGATVQVEGPI---EGRLVHPHVFSDVTSDMEIAREEIFG 391 (508)
T ss_dssp HHHHHTCCBSCTTSSSCCBCCCSCHHHHHHHHHHHHHHHTTTCEEEECCCE---ETTEECCEEEEEECTTSGGGTSCCCS
T ss_pred HHHHHhccCCCCccCCCcccCCCCHHHHHHHHHHHHHHHHcCCEEEecCCC---CCcEEecEEEecCCCCChhhcccccC
Confidence 999999999999999999999999999999999999999999999999975 68999999999999999999999999
Q ss_pred ceEEEeeeCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHHhccceeEEEECCcCCC-CCCCCccCCCCCCCCCcchHHH
Q 015031 316 PVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSIRAGIIWINCYFAF-DSDCPYGGYKMSGFGRDCGLES 394 (414)
Q Consensus 316 Pvl~v~~~~~~~eai~~~n~~~~gl~~sv~s~d~~~~~~~~~~l~~g~v~vN~~~~~-~~~~pfgG~~~sG~g~~~g~~~ 394 (414)
||++|++|+|+||||+++|+++|||++||||+|.+.++++++++++|+|+||++... .+.+||||+|.||+|+++|++|
T Consensus 392 PVl~v~~~~~~deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~V~vN~~~~~~~~~~PfGG~~~SG~Gr~~G~~~ 471 (508)
T 3r64_A 392 PLISVLKADDEAHAAELANASDFGLSAAVWSKDIDRAAQFALQIDSGMVHINDLTVNDEPHVMFGGSKNSGLGRFNGDWA 471 (508)
T ss_dssp SEEEEEEESSHHHHHHHHTSSSCCSCEEEECSCHHHHHHHHTTSCSSEEEECC--------------------CCCHHHH
T ss_pred ceEEEEEeCCHHHHHHHHhCCCCCcEEEEEcCCHHHHHHHHHhCCcceEEEcCCCCCCCCCCCcCCcCCCCCCcCccHHH
Confidence 999999999999999999999999999999999999999999999999999998754 6789999999999999999999
Q ss_pred HHhhhcccEEEEeCC
Q 015031 395 LHNYLQVKSVVTPIF 409 (414)
Q Consensus 395 ~~~~~~~k~i~~~~~ 409 (414)
+++||++|+|+++..
T Consensus 472 l~~ft~~k~v~~~~~ 486 (508)
T 3r64_A 472 IEEFTTDRWIGIKRS 486 (508)
T ss_dssp HHHTEEEEEEEEECC
T ss_pred HHHhhceEEEEEecc
Confidence 999999999988763
|
| >1uxt_A Glyceraldehyde-3-phosphate dehydrogenase (NADP+); GAPN, ALDH, glucose 1-phosphate, glycolysis, regulation, catatysis, oxidoreductase; HET: G1P NAD; 2.2A {Thermoproteus tenax} SCOP: c.82.1.1 PDB: 1uxp_A* 1uxq_A* 1uxr_A* 1uxn_A* 1uxu_A* 1uxv_A* 1ky8_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=7.4e-90 Score=700.97 Aligned_cols=401 Identities=30% Similarity=0.479 Sum_probs=380.2
Q ss_pred CHHHHHHHHHhHHHHHHHHHHHcCCChHHHhhccHHHHHHHHHHHHHhhhhhcCceeccc---c--CccccccccCCcEE
Q 015031 1 MLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMS---R--ALQGYTLREPIGVV 75 (414)
Q Consensus 1 L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~---~--~~~~~~~~~P~Gvv 75 (414)
|+++++.|++|+++|++++++|+|||..++. .|+..+++.+++++.++++..+..++.. . +...+.+++|+|||
T Consensus 83 L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea~-~Ev~~~~~~l~~~a~~~~~~~g~~~~~~~~~~~~~~~~~~~~~P~GVv 161 (501)
T 1uxt_A 83 LRKAADIIERNLDVFAEVLVMNAGKPKSAAV-GEVKAAVDRLRLAELDLKKIGGDYIPGDWTYDTLETEGLVRREPLGVV 161 (501)
T ss_dssp HHHHHHHHHHTHHHHHHHHHHHHCCCHHHHH-HHHHHHHHHHHTGGGGGGGTCCEEEESTTSSTTTTEEEEEEEEECSEE
T ss_pred HHHHHHHHHHhHHHHHHHHHHHhCCCHHHHH-HHHHHHHHHHHHHHHHHHHhcCccccccccCCCcCceEEEEEeeccEE
Confidence 5789999999999999999999999999764 7999999999999998887766554432 2 23568899999999
Q ss_pred EEEcCCCcChHhhHHHHHHHHhcCCeEEEecCCCChhHHHHHHHHHHHcCCCCCeEEEEcCCchhHHHHHHhCCCcCeEE
Q 015031 76 GHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVS 155 (414)
Q Consensus 76 ~~i~p~n~P~~~~~~~~~~ALaaGN~vv~kps~~~~~~~~~l~~~~~~aglp~g~v~~~~~~~~~~~~~l~~~~~~~~v~ 155 (414)
++|+|||||+...++++++||++||+||+|||+.+|.++..+++++.++|+|+|++|+++|++ ++++.|+.||++|.|.
T Consensus 162 ~~I~PwN~P~~~~~~~~~~ALaaGN~VVlKps~~tp~t~~~l~~l~~eaGlP~gvv~vv~g~~-~~g~~L~~~~~vd~I~ 240 (501)
T 1uxt_A 162 AAITPFNYPLFDAVNKITYSFIYGNAVVVKPSISDPLPAAMAVKALLDAGFPPDAIALLNLPG-KEAEKIVADDRVAAVS 240 (501)
T ss_dssp EEECCTTSTTHHHHHHHHHHHHTTCEEEEECCTTSCHHHHHHHHHHHHTTCCTTSEEECCCCH-HHHHHHHTCTTCCEEE
T ss_pred EEECCCccHHHHHHHHHHHHHHcCCEEEEeCCCCchHHHHHHHHHHHHhCCCcCeEEEEeCCc-HHHHHHHhCCCcCEEE
Confidence 999999999999999999999999999999999999999999999999999999999999977 8899999999999999
Q ss_pred EeCCHHHHHHHHHHHhhCCCCceeeeCCCCCceeecCCCCHHHHHHHHHHHHhcccCCccccCcEEEEeCccHHHHHHHH
Q 015031 156 FTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKL 235 (414)
Q Consensus 156 ~tGs~~~~~~i~~~~~~~~~~~~~~e~gG~~~~iV~~dadl~~a~~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f~~~l 235 (414)
||||+.+|+.|.+.++ ++|+++|+|||||+||++|||++.|++.+++++|.|+||.|+++++||||++++|+|+++|
T Consensus 241 FTGS~~~G~~i~~~aa---l~~v~lELGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l 317 (501)
T 1uxt_A 241 FTGSTEVGERVVKVGG---VKQYVMELGGGDPAIVLEDADLDLAADKIARGIYSYAGQRCDAIKLVLAERPVYGKLVEEV 317 (501)
T ss_dssp EESCHHHHHHHHHHHC---SSEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCSTTCEEEEEEEHHHHHHHHHHH
T ss_pred EeCcHHHHHHHHHhcC---CCeEEEEcCCcCeEEECCCCCHHHHHHHHHHHHhcCCCCCCcCCcEEEeccchHHHHHHHH
Confidence 9999999999999864 8999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhccccCCCCCCCCCccccCCHHHHHHHHHHHHHhhhcCCeEeeCCcccCCCC-ceeeeEEEEeCC---CCCccccc
Q 015031 236 VEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIGKKG-YYIEPTIFTNVT---EDMLIAKN 311 (414)
Q Consensus 236 ~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~~~g-~~~~Ptvl~~~~---~~~~~~~~ 311 (414)
+++++++++|+|.|+++++||+++..+++++++++++++++|+++++||.. .| +|++|||+.+++ ++|++++|
T Consensus 318 ~~~~~~~~~g~p~~~~~~~Gpli~~~~~~rv~~~i~~a~~~Ga~~~~gG~~---~g~~~~~Ptvl~~v~~~~~~~~i~~e 394 (501)
T 1uxt_A 318 AKRLSSLRVGDPRDPTVDVGPLISPSAVDEMMAAIEDAVEKGGRVLAGGRR---LGPTYVQPTFVEAPADRVKDMVLYKR 394 (501)
T ss_dssp HHHHHTCCBSCTTSTTCSBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCCB---CSSSCBCCEEEECCHHHHTTSHHHHS
T ss_pred HHHHHhccCCCccccCCcccCCCCHHHHHHHHHHHHHHHHCCCEEEeCCcc---CCCceECCEEEeCCCCCCCcCHHHhC
Confidence 999999999999999999999999999999999999999999999999975 57 999999999999 99999999
Q ss_pred ccccceEEEeeeCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHHhccceeEEEECCc-CCCCCCCCccCCCCCCCCCcc
Q 015031 312 EIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSIRAGIIWINCY-FAFDSDCPYGGYKMSGFGRDC 390 (414)
Q Consensus 312 E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~sv~s~d~~~~~~~~~~l~~g~v~vN~~-~~~~~~~pfgG~~~sG~g~~~ 390 (414)
|+||||++|++|+|+||||+++|+++|||++||||+|.+.++++++++++|+|+||++ ....+.+||||+|.||+|+++
T Consensus 395 EiFGPVl~v~~~~~~deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~~G~V~iN~~~~~~~~~~PfGG~k~SG~G~~~ 474 (501)
T 1uxt_A 395 EVFAPVALAVEVKDLDQAIELANGRPYGLDAAVFGRDVVKIRRAVRLLEVGAIYINDMPRHGIGYYPFGGRKKSGVFREG 474 (501)
T ss_dssp CCCSSEEEEEEESSHHHHHHHHHTSSEESEEEEECCCHHHHHHHHHHCCSSEEEETSCCCCTTSSSCBCCEETTEESCBS
T ss_pred cccCceEEEEeeCCHHHHHHHHhcCCCCcEEEEeCCCHHHHHHHHHhCCEeeEEEeCCCCCCCCCCCCCCcCCCCCCccC
Confidence 9999999999999999999999999999999999999999999999999999999998 556788999999999999999
Q ss_pred hHHHHHhhhcccEEEEeCC
Q 015031 391 GLESLHNYLQVKSVVTPIF 409 (414)
Q Consensus 391 g~~~~~~~~~~k~i~~~~~ 409 (414)
|.+|+++|+++|+|+.++.
T Consensus 475 G~~~l~~f~~~k~v~~~~~ 493 (501)
T 1uxt_A 475 IGYAVEAVTAYKTIVFNYK 493 (501)
T ss_dssp TTTTHHHHEEEEEEEEECT
T ss_pred hHHHHHHhCceeEEEEecC
Confidence 9999999999999988763
|
| >1euh_A NADP dependent non phosphorylating glyceraldehyde-3-phosphate dehydrogenase; oxidoreductase; 1.82A {Streptococcus mutans} SCOP: c.82.1.1 PDB: 1qi6_A 2euh_A* 2id2_A* 2qe0_A* 2esd_A* 1qi1_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3e-89 Score=693.73 Aligned_cols=400 Identities=33% Similarity=0.505 Sum_probs=378.4
Q ss_pred CHHHHHHHHHhHHHHHHHHHHHcCCChHHHhhccHHHHHHHHHHHHHhhhhhcCceeccc-cC----ccc-cccccCCcE
Q 015031 1 MLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMS-RA----LQG-YTLREPIGV 74 (414)
Q Consensus 1 L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~-~~----~~~-~~~~~P~Gv 74 (414)
|+++++.|++|+++|++++++|+|||..++ ..|+..+++.+++++.++++..+...+.. .+ ... +..++|+||
T Consensus 68 L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea-~~ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GV 146 (475)
T 1euh_A 68 LHKVADILMRDKEKIGAILSKEVAKGYKSA-VSEVVRTAEIINYAAEEGLRMEGEVLEGGSFEAASKKKIAVVRREPVGL 146 (475)
T ss_dssp HHHHHHHHHHTHHHHHHHHHHHHTCCHHHH-HHHHHHHHHHHHHHHHHHTTCCEEEEEGGGTCGGGTTEEEEEEEEECSE
T ss_pred HHHHHHHHHHhHHHHHHHHHHHhCCCHHHH-HHHHHHHHHHHHHHHHHHHHhcCCcccCCCCCccccceeeEEEEeccce
Confidence 578999999999999999999999999975 67999999999999998877655543322 23 345 889999999
Q ss_pred EEEEcCCCcChHhhHHHHHHHHhcCCeEEEecCCCChhHHHHHHHHHHHcCCCCCeEEEEcCCchhHHHHHHhCCCcCeE
Q 015031 75 VGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKV 154 (414)
Q Consensus 75 v~~i~p~n~P~~~~~~~~~~ALaaGN~vv~kps~~~~~~~~~l~~~~~~aglp~g~v~~~~~~~~~~~~~l~~~~~~~~v 154 (414)
|++|+|||||+...++++++||++||+||+|||+.+|.++..+++++.++|+|+|++|+++|++.+.++.|+.||++|.|
T Consensus 147 v~~I~PwN~P~~~~~~~~~~ALaaGN~vVlKps~~tp~t~~~l~~ll~~aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~V 226 (475)
T 1euh_A 147 VLAISPFNYPVNLAGSKIAPALIAGNVIAFKPPTQGSISGLLLAEAFAEAGLPAGVFNTITGRGSEIGDYIVEHQAVNFI 226 (475)
T ss_dssp EEEECCTTSTTHHHHHHHHHHHHTTCEEEEECCSTTHHHHHHHHHHHHHHTCCTTTEEECCCCHHHHHHHHHHCTTCCEE
T ss_pred EEEECCCCchHHHHHHHHHHHHHcCCEEEEeCCCcChHHHHHHHHHHHHhCCCcCeEEEEeCCcHHHHHHHHhCCCcCEE
Confidence 99999999999999999999999999999999999999999999999999999999999999777789999999999999
Q ss_pred EEeCCHHHHHHHHHHHhhCCCCceeeeCCCCCceeecCCCCHHHHHHHHHHHHhcccCCccccCcEEEEeCccHHHHHHH
Q 015031 155 SFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKK 234 (414)
Q Consensus 155 ~~tGs~~~~~~i~~~~~~~~~~~~~~e~gG~~~~iV~~dadl~~a~~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f~~~ 234 (414)
.||||+.+|+.|.+.++ ++|+++|+|||||+||++|||++.|++.+++++|.|+||.|+++++||||++++|+|+++
T Consensus 227 ~fTGS~~~g~~i~~~aa---~~~v~lElGGk~p~iV~~dADl~~aa~~i~~~~~~n~GQ~C~a~~rv~V~~~i~d~f~~~ 303 (475)
T 1euh_A 227 NFTGSTGIGERIGKMAG---MRPIMLELGGKDSAIVLEDADLELTAKNIIAGAFGYSGQRCTAVKRVLVMESVADELVEK 303 (475)
T ss_dssp EEESCHHHHHHHHHHTT---TSCEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCCSSSEEEEEEEHHHHHHHHHH
T ss_pred EEECchHHHHHHHHhcC---CCcEEEEcCCcCeEEECCCCCHHHHHHHHHHHHhhcCCCcCCCCcEEEEehhHHHHHHHH
Confidence 99999999999999864 899999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhccccCCCCCCCCCccccCCHHHHHHHHHHHHHhhhcCCeEeeCCcccCCCCceeeeEEEEeCCCCCcccccccc
Q 015031 235 LVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIGKKGYYIEPTIFTNVTEDMLIAKNEIF 314 (414)
Q Consensus 235 l~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~f 314 (414)
|+++++++++|+|.+ ++++||+++..+++++.+++++++++|+++++||.. .|+|++|||+.+++++|++++||+|
T Consensus 304 l~~~~~~~~~g~p~~-~~~~gpli~~~~~~~v~~~i~~a~~~Ga~~~~gG~~---~g~~~~Ptvl~~v~~~~~~~~eE~F 379 (475)
T 1euh_A 304 IREKVLALTIGNPED-DADITPLIDTKSADYVEGLINDANDKGATALTEIKR---EGNLICPILFDKVTTDMRLAWEEPF 379 (475)
T ss_dssp HHHHHHTSCBSCGGG-TCSBCCCSCHHHHHHHHHHHHHHHHTTCEECSCCCE---ETTEECCEEEESCCTTSGGGTSCCC
T ss_pred HHHHHHhccCCCccc-cCccCCCCCHHHHHHHHHHHHHHHHCCCEEEeCCcc---CCceeCCEEEeCCCCcCHHHcCccc
Confidence 999999999999999 999999999999999999999999999999999975 5899999999999999999999999
Q ss_pred cceEEEeeeCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHHhccceeEEEECC-cCCCCCCCCccCCCCCCCCCcchHH
Q 015031 315 GPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSIRAGIIWINC-YFAFDSDCPYGGYKMSGFGRDCGLE 393 (414)
Q Consensus 315 gPvl~v~~~~~~~eai~~~n~~~~gl~~sv~s~d~~~~~~~~~~l~~g~v~vN~-~~~~~~~~pfgG~~~sG~g~~~g~~ 393 (414)
|||++|++|+|+||||+++|+++|||++||||+|.+.++++++++++|+|+||+ +....+.+||||+|.||+|+++|.+
T Consensus 380 GPvl~v~~~~~~~eai~~an~~~~gL~a~v~t~d~~~~~~~~~~l~~G~v~vN~~~~~~~~~~pfGG~k~SG~G~~~g~~ 459 (475)
T 1euh_A 380 GPVLPIIRVTSVEEAIEISNKSEYGLQASIFTNDFPRAFGIAEQLEVGTVHINNKTQRGTDNFPFLGAKKSGAGIQGVKY 459 (475)
T ss_dssp SSEEEEEEESCHHHHHHHHHHSSEESEEEEECSCHHHHHHHHHHSCSSEEEESSCCCCCSTTSCBCCEETTEESCBSHHH
T ss_pred cceEEEEecCCHHHHHHHHhCCCCCeeEEEEeCCHHHHHHHHHhCCEeeEEECCCCCCCCCCCCcCCCCCCCcCCCccHH
Confidence 999999999999999999999999999999999999999999999999999999 6656788999999999999999999
Q ss_pred HHHhhhcccEEEEeC
Q 015031 394 SLHNYLQVKSVVTPI 408 (414)
Q Consensus 394 ~~~~~~~~k~i~~~~ 408 (414)
|+++|+++|+|+.++
T Consensus 460 ~~~~~~~~k~v~~~~ 474 (475)
T 1euh_A 460 SIEAMTTVKSVVFDI 474 (475)
T ss_dssp HHHHTEEEEEEEEEC
T ss_pred HHHHhCCeeEEEEec
Confidence 999999999998764
|
| >2j6l_A Aldehyde dehydrogenase family 7 member A1; NAD, reductase, oxidoreductase, lysine catabolism; HET: NAI; 1.3A {Homo sapiens} PDB: 2jg7_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.6e-89 Score=696.32 Aligned_cols=405 Identities=29% Similarity=0.487 Sum_probs=378.4
Q ss_pred CHHHHHHHHHhHHHHHHHHHHHcCCChHHHhhccHHHHHHHHHHHHHhhhhhcCceeccc-cCccccccccCCcEEEEEc
Q 015031 1 MLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMS-RALQGYTLREPIGVVGHII 79 (414)
Q Consensus 1 L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~-~~~~~~~~~~P~Gvv~~i~ 79 (414)
|+++++.|++|+++|++++++|+|||..++ ..|+..+++.+++++.++++..+...+.. .+...+.+++|+|||++|+
T Consensus 87 L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea-~~ev~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~~P~GVv~~I~ 165 (500)
T 2j6l_A 87 VRQIGDALREKIQVLGSLVSLEMGKILVEG-VGEVQEYVDICDYAVGLSRMIGGPILPSERSGHALIEQWNPVGLVGIIT 165 (500)
T ss_dssp HHHHHHHHHHTHHHHHHHHHHHTCCCHHHH-HHHHHHHHHHHHHHHHHTTTCCCBEECCSSTTEEEEEEEEECSEEEEEC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHcCCCHHHH-HHHHHHHHHHHHHHHHHHHHhcCccccccCCCceeEEEEecccEEEEEC
Confidence 578999999999999999999999999976 67999999999999988877655543322 2334567899999999999
Q ss_pred CCCcChHhhHHHHHHHHhcCCeEEEecCCCChhHHHHHHHHHH----HcCCCCCeEEEEcCCchhHHHHHHhCCCcCeEE
Q 015031 80 PWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAK----LAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVS 155 (414)
Q Consensus 80 p~n~P~~~~~~~~~~ALaaGN~vv~kps~~~~~~~~~l~~~~~----~aglp~g~v~~~~~~~~~~~~~l~~~~~~~~v~ 155 (414)
|||||+...++++++||++||+||+|||+.+|.++..+++++. ++|+|+|++|+++| +.++++.|+.||++|.|.
T Consensus 166 PwN~P~~~~~~~~~~ALaaGN~VVlKps~~tp~t~~~l~~l~~~al~~aGlP~gvv~vv~g-~~~~g~~L~~~~~vd~I~ 244 (500)
T 2j6l_A 166 AFNFPVAVYGWNNAIAMICGNVCLWKGAPTTSLISVAVTKIIAKVLEDNKLPGAICSLTCG-GADIGTAMAKDERVNLLS 244 (500)
T ss_dssp CSSSTTHHHHHHHHHHHHTTCEEEEECCGGGHHHHHHHHHHHHHHHHHTTCCGGGEEEECC-SHHHHHHHHHCTTCSEEE
T ss_pred CCcchhhHHHHHHHHHHHhCCEEEEECCCccHHHHHHHHHHHHHHHHhhcCCcCeEEEEeC-CHHHHHHHhcCCCcCEEE
Confidence 9999999999999999999999999999999999999888866 56999999999999 778899999999999999
Q ss_pred EeCCHHHHHHHHHHHhhCCCCceeeeCCCCCceeecCCCCHHHHHHHHHHHHhcccCCccccCcEEEEeCccHHHHHHHH
Q 015031 156 FTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKL 235 (414)
Q Consensus 156 ~tGs~~~~~~i~~~~~~~~~~~~~~e~gG~~~~iV~~dadl~~a~~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f~~~l 235 (414)
||||+.+|+.|.+.++ ++.+|+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||++++|+|+++|
T Consensus 245 FTGS~~~g~~i~~~aa-~~l~~v~lELGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l 323 (500)
T 2j6l_A 245 FTGSTQVGKQVGLMVQ-ERFGRSLLELGGNNAIIAFEDADLSLVVPSALFAAVGTAGQRCTTARRLFIHESIHDEVVNRL 323 (500)
T ss_dssp EESCHHHHHHHHHHHH-HTTCEEEEECCCCEEEEECTTCCHHHHHHHHHHHHHGGGGCSTTCEEEEEEETTTHHHHHHHH
T ss_pred EECCHHHHHHHHHHhc-cCCCceEEEcCCCCceEECCCCCHHHHHHHHHHHHHhcCCCCcCCCcEEEEcHHHHHHHHHHH
Confidence 9999999999999987 789999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhccccCCCCCCCCCccccCCHHHHHHHHHHHHHhhhcCCeEeeCCcccCCCCceeeeEEEEeCCCCCccccccccc
Q 015031 236 VEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIGKKGYYIEPTIFTNVTEDMLIAKNEIFG 315 (414)
Q Consensus 236 ~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fg 315 (414)
+++++++++|+|.++++++||++++.+++++++++++++++|+++++||...+..|+|++|||+.+++++|++++||+||
T Consensus 324 ~~~~~~~~~G~p~~~~~~~gpli~~~~~~rv~~~i~~a~~~Ga~v~~gg~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFG 403 (500)
T 2j6l_A 324 KKAYAQIRVGNPWDPNVLYGPLHTKQAVSMFLGAVEEAKKEGGTVVYGGKVMDRPGNYVEPTIVTGLGHDASIAHTETFA 403 (500)
T ss_dssp HHHHHTCCBSCTTSTTCCBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCSBCSSSSSCBCCEEEESCCTTCHHHHSCCSS
T ss_pred HHHhhhcccCCcccCCCccccCCCHHHHHHHHHHHHHHHHCCCEEEECCcccCCCCCEEcCEEEECCCCcChhhcCcccC
Confidence 99999999999999999999999999999999999999999999999998644479999999999999999999999999
Q ss_pred ceEEEeeeCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHH--hccceeEEEECCcCC-CCCCCCccCCCCCCCCCcchH
Q 015031 316 PVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVS--RSIRAGIIWINCYFA-FDSDCPYGGYKMSGFGRDCGL 392 (414)
Q Consensus 316 Pvl~v~~~~~~~eai~~~n~~~~gl~~sv~s~d~~~~~~~~--~~l~~g~v~vN~~~~-~~~~~pfgG~~~sG~g~~~g~ 392 (414)
||++|++|+|+||||+++|+++|||++||||+|.+.+++++ .++++|+|+||++.. ..+.+||||+|.||+|+++|.
T Consensus 404 PVl~v~~~~~~deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~~~~~~G~V~vN~~~~~~~~~~PfGG~k~SG~G~~~g~ 483 (500)
T 2j6l_A 404 PILYVFKFQNEEEVFAWNNEVKQGLSSSIFTKDLGRIFRWLGPKGSDCGIVNVNIPTSGAEIGGAFGGEKHTGGGRESGS 483 (500)
T ss_dssp SEEEEEEECCHHHHHHHHHTSSCCSEEEEECCCHHHHHHHHSTTSCCSSEEEESSCTTCCCTTSEECCSGGGCSCCEEST
T ss_pred ceEEEEeeCCHHHHHHHHhCCCCCcEEEEECCCHHHHHHHHhhccCCeeEEEECCCCccCCCCCCcCCcCCCCCCCcchH
Confidence 99999999999999999999999999999999999999999 779999999998754 346899999999999999999
Q ss_pred HHHHhhhcccEEEEeC
Q 015031 393 ESLHNYLQVKSVVTPI 408 (414)
Q Consensus 393 ~~~~~~~~~k~i~~~~ 408 (414)
+|+++|++.|+|+.++
T Consensus 484 ~~~~~f~~~k~v~~~~ 499 (500)
T 2j6l_A 484 DAWKQYMRRSTCTINY 499 (500)
T ss_dssp TGGGGGEEEEEEEEEC
T ss_pred HHHHHhhceEEEEEeC
Confidence 9999999999998753
|
| >4dng_A Uncharacterized aldehyde dehydrogenase ALDY; structural genomics, protein structure initiative, nysgrc, P biology; 2.50A {Bacillus subtilis} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.5e-89 Score=698.10 Aligned_cols=406 Identities=29% Similarity=0.467 Sum_probs=361.3
Q ss_pred CHHHHHHHHHhHHHHHHHHHHHcCCChHHHhhccHHHHHHHHHHHHHhhhhhcCceeccc--cCccccccccCCcEEEEE
Q 015031 1 MLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMS--RALQGYTLREPIGVVGHI 78 (414)
Q Consensus 1 L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~--~~~~~~~~~~P~Gvv~~i 78 (414)
|+++++.|++|+++|++++++|+|||..++. .|+..+++.+++++.++++..+...+.. .+...+.+++|+|||++|
T Consensus 72 L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a~-~ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I 150 (485)
T 4dng_A 72 LQKARGYLHENRDDIIMMIARETGGTIIKST-IELEQTIAILDEAMTYTGELGGVKEVPSDIEGKTNKIYRLPLGVISSI 150 (485)
T ss_dssp HHHHHHHHHHTHHHHHHHHHHHHCCCHHHHH-HHHHHHHHHHHHHHHHGGGCSCEECCCCSSTTEEEEEEEEECCEEEEE
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCCHHHHH-HHHHHHHHHHHHHHHHHHHhCCeeccccCCCCceEEEEEecceEEEEE
Confidence 5789999999999999999999999999864 5999999999999998877666544322 346678999999999999
Q ss_pred cCCCcChHhhHHHHHHHHhcCCeEEEecCCCChhHH-HHHHHHHHHcCCCCCeEEEEcCCchhHHHHHHhCCCcCeEEEe
Q 015031 79 IPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIA-LYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFT 157 (414)
Q Consensus 79 ~p~n~P~~~~~~~~~~ALaaGN~vv~kps~~~~~~~-~~l~~~~~~aglp~g~v~~~~~~~~~~~~~l~~~~~~~~v~~t 157 (414)
+|||||+...++++++||++||+||+|||+.+|.++ ..|.+++.++|+|+|++|++++++.+.++.|+.||++|.|.||
T Consensus 151 ~PwN~P~~~~~~~~~~ALaaGN~VVlKps~~tp~~~~~~l~~~l~~aGlP~gvv~vv~g~~~~~~~~L~~~p~v~~v~fT 230 (485)
T 4dng_A 151 SPFNFPMNLSMRSIAPAIALGNSVVHKPDIQTAISGGTIIAKAFEHAGLPAGVLNVMLTDVKEIGDGMLTNPIPRLISFT 230 (485)
T ss_dssp CCSSSHHHHHHHHHHHHHHTTCEEEEECCGGGHHHHTHHHHHHHHHTTCCTTSEEECCCCHHHHTTHHHHCSSCSEEEEE
T ss_pred CCCccHHHHHHHHHHHHHHcCCEEEEECCCcChHHHHHHHHHHHHHhCcCCCeEEEEeCCChhHHHHHHhCCCCCEEEEE
Confidence 999999999999999999999999999999999999 9999999999999999999999887899999999999999999
Q ss_pred CCHHHHHHHHHHHhhCCCCceeeeCCCCCceeecCCCCHHHHHHHHHHHHhcccCCccccCcEEEEeCccHHHHHHHHHH
Q 015031 158 GSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVE 237 (414)
Q Consensus 158 Gs~~~~~~i~~~~~~~~~~~~~~e~gG~~~~iV~~dadl~~a~~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f~~~l~~ 237 (414)
||+.+|+.|.+.++ ++++|+++|+|||||+||++|||++.|++.+++++|.|+||.|+++++||||++++|+|+++|++
T Consensus 231 GS~~~g~~i~~~aa-~~~~~v~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~~~GQ~C~a~~rvlV~~~i~d~f~~~l~~ 309 (485)
T 4dng_A 231 GSTAVGRHIGEIAG-RAFKRMALELGGNNPFAVLSDADVDRAVDAAIFGKFIHQGQICMIINRIIVHQDVYDEFVEKFTA 309 (485)
T ss_dssp ECHHHHHHHHHHHH-HHTCEEEEEECCCEEEEECTTSCHHHHHHHHHHHHTTCC----CCEEEEEEEHHHHHHHHHHHHH
T ss_pred CCcHHHHHHHHHHh-hhccchhhhcCCCCceEEcCCCCHHHHHHHHHHHHHhcCCCccccCCEEEEeHHHHHHHHHHHHH
Confidence 99999999999987 78899999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhccccCCCCCCCCCccccCCHHHHHHHHHHHHHhhhcCCeEeeCCcccCCCCceeeeEEEEeCCCCCcccccccccce
Q 015031 238 KAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIGKKGYYIEPTIFTNVTEDMLIAKNEIFGPV 317 (414)
Q Consensus 238 ~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPv 317 (414)
+++++++|+|.|+++++||+++..+++++++++++++++|+++++||.. .|+|++|||+.+++++|++++||+||||
T Consensus 310 ~~~~~~~g~~~~~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~v~~gg~~---~g~~~~Ptvl~~v~~~~~i~~eE~FGPv 386 (485)
T 4dng_A 310 RVKQLPYGDQTDPKTVVGPLINERQIEKALEIIEQAKTDGIELAVEGKR---VGNVLTPYVFVGADNNSKIAQTELFAPI 386 (485)
T ss_dssp HHHHCCBSCTTSTTCSBCCCSSHHHHHHHHHHHHHHHHTTCEEEECCCE---ETTEECCEEEESCCTTSHHHHCCCCSSE
T ss_pred HHHhccCCCCCcCCCccCCCCCHHHHHHHHHHHHHHHHCCCEEEeCCCC---CCcEECCEEEecCCCCChhhcCccccce
Confidence 9999999999999999999999999999999999999999999999975 6899999999999999999999999999
Q ss_pred EEEeeeCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHHhccceeEEEECCcCCC-CCCCCccCCCCCCCCCcchHHHHH
Q 015031 318 MALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSIRAGIIWINCYFAF-DSDCPYGGYKMSGFGRDCGLESLH 396 (414)
Q Consensus 318 l~v~~~~~~~eai~~~n~~~~gl~~sv~s~d~~~~~~~~~~l~~g~v~vN~~~~~-~~~~pfgG~~~sG~g~~~g~~~~~ 396 (414)
++|++|+|+||||+++|+++|||+++|||+|.+.++++++++++|+|+||++... .+.+||||+|.||+|+++|+++++
T Consensus 387 l~v~~~~~~~eAi~~an~~~~gL~a~v~t~d~~~a~~~~~~l~~G~v~vN~~~~~~~~~~pfGG~~~SG~G~~~g~~~l~ 466 (485)
T 4dng_A 387 ATIIKAGSDQEAIDMANDTEYGLSSAVFTSDLEKGEKFALQIDSGMTHVNDQSVNDSPNIAFGGNKASGVGRFGNPWVVE 466 (485)
T ss_dssp EEEEEESSHHHHHHHHHCSSCCSEEEEECSCHHHHHHHHTTSCSSEEEESCC----------------------CHHHHH
T ss_pred EEEEEeCCHHHHHHHHhCCCCCceEEEECCCHHHHHHHHHhcCcceEEECCCCCCCCCCCCcCCcCCCCCCccchHHHHH
Confidence 9999999999999999999999999999999999999999999999999998753 688999999999999999999999
Q ss_pred hhhcccEEEEeCCCC
Q 015031 397 NYLQVKSVVTPIFNS 411 (414)
Q Consensus 397 ~~~~~k~i~~~~~~~ 411 (414)
+||+.|+|++++...
T Consensus 467 ~~t~~k~v~~~~~~~ 481 (485)
T 4dng_A 467 EFTVTKWISIQKQYR 481 (485)
T ss_dssp HHEEEEEEEEEC---
T ss_pred HhhceEEEEEecCCc
Confidence 999999999887644
|
| >1uzb_A 1-pyrroline-5-carboxylate dehydrogenase; oxidoreductase, riken structural genomics/proteomics initiative, RSGI, structural genomics; 1.4A {Thermus thermophilus} SCOP: c.82.1.1 PDB: 2eiw_A 2bhq_A* 2bhp_A* 2bja_A* 2bjk_A* 2ehq_A* 2ehu_A* 2eii_A* 2eit_A* 2ej6_A 2ejd_A* 2ejl_A 2iy6_A* 2j40_A* 2j5n_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=7.7e-89 Score=696.34 Aligned_cols=404 Identities=32% Similarity=0.541 Sum_probs=377.8
Q ss_pred CHHHHHHHHHhHHHHHHHHHHHcCCChHHHhhccHHHHHHHHHHHHHhhhhhcCceec--cccCccccccccCCcEEEEE
Q 015031 1 MLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLK--MSRALQGYTLREPIGVVGHI 78 (414)
Q Consensus 1 L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~~~~~~~~~~~--~~~~~~~~~~~~P~Gvv~~i 78 (414)
|+++++.|++|+++|++++++|+|||..++ ..|+..+++.+++++..+++..+...+ ...+...+..++|+|||++|
T Consensus 102 L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea-~~ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I 180 (516)
T 1uzb_A 102 LLKAAALMRRRKRELEATLVYEVGKNWVEA-SADVAEAIDFIEYYARAALRYRYPAVEVVPYPGEDNESFYVPLGAGVVI 180 (516)
T ss_dssp HHHHHHHHHHTHHHHHHHHHHHHCCCHHHH-HHHHHHHHHHHHHHHHHHGGGCSSCCCCCCCTTEEEEEEEEECCEEEEE
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCCHHHH-HHHHHHHHHHHHHHHHHHHHhcCCcccccCCCCceEEEEEeccceEEEE
Confidence 578999999999999999999999999976 479999999999999988877655322 12345568899999999999
Q ss_pred cCCCcChHhhHHHHHHHHhcCCeEEEecCCCChhHHHHHHHHHHHcCCCCCeEEEEcCCchhHHHHHHhCCCcCeEEEeC
Q 015031 79 IPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTG 158 (414)
Q Consensus 79 ~p~n~P~~~~~~~~~~ALaaGN~vv~kps~~~~~~~~~l~~~~~~aglp~g~v~~~~~~~~~~~~~l~~~~~~~~v~~tG 158 (414)
+|||||+...++++++||++||+||+|||+.+|+++..+++++.++|+|+|++|+++|++.++++.|+.||++|.|.|||
T Consensus 181 ~PwN~P~~~~~~~~a~ALaaGN~VVlKps~~tp~ta~~l~~l~~eaGlP~gvv~vv~g~~~~~~~~L~~~~~v~~I~FTG 260 (516)
T 1uzb_A 181 APWNFPVAIFTGMIVGPVAVGNTVIAKPAEDAVVVGAKVFEIFHEAGFPPGVVNFLPGVGEEVGAYLVEHPRIRFINFTG 260 (516)
T ss_dssp CCSSSTTHHHHHHHHHHHHTTCEEEEECCGGGHHHHHHHHHHHHHHTCCTTSEEECCCSSSHHHHHHHTCTTCCEEEEES
T ss_pred CCCccHHHHHHHHHHHHHHcCCeEEEeCCCCCHHHHHHHHHHHHHhCCCcCeEEEEeCCCchhhhhhhcCCCcCEEEecC
Confidence 99999999999999999999999999999999999999999999999999999999997778899999999999999999
Q ss_pred CHHHHHHHHHHHhh-----CCCCceeeeCCCCCceeecCCCCHHHHHHHHHHHHhcccCCccccCcEEEEeCccHHHHHH
Q 015031 159 STDVGRQVMQAAAT-----SNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEK 233 (414)
Q Consensus 159 s~~~~~~i~~~~~~-----~~~~~~~~e~gG~~~~iV~~dadl~~a~~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f~~ 233 (414)
|+.+|+.|.+.++. ++++|+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||++++|+|++
T Consensus 261 S~~~G~~i~~~aa~~~~~~~~~~~v~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~ 340 (516)
T 1uzb_A 261 SLEVGLKIYEAAGRLAPGQTWFKRAYVETGGKNAIIVDETADFDLAAEGVVVSAYGFQGQKCSAASRLILTQGAYEPVLE 340 (516)
T ss_dssp CHHHHHHHHHHHTSCCTTCCSCCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCSTTCEEEEEEEHHHHHHHHH
T ss_pred CHHHHHHHHHHhhhccccccccceeEEecCCccceeECCCCCHHHHHHHHHHHHHhCCCCccccCcEEEEchHHHHHHHH
Confidence 99999999998762 5689999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhccccCCCCCCCCCccccCCHHHHHHHHHHHHHhhhcCCeEeeCCcccCCCCceeeeEEEEeCCCCCccccccc
Q 015031 234 KLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIGKKGYYIEPTIFTNVTEDMLIAKNEI 313 (414)
Q Consensus 234 ~l~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~ 313 (414)
+|+++++++++|+| ++++++||++++.+++++++++++++++| ++++||......|+|++|||+.+++++|++++||+
T Consensus 341 ~l~~~~~~~~~G~p-~~~~~~Gpli~~~~~~~v~~~i~~a~~~G-~v~~gg~~~~~~g~~~~Ptvl~~v~~~~~i~~eEi 418 (516)
T 1uzb_A 341 RVLKRAERLSVGPA-EENPDLGPVVSAEQERKVLSYIEIGKNEG-QLVLGGKRLEGEGYFIAPTVFTEVPPKARIAQEEI 418 (516)
T ss_dssp HHHHHHTTCCBSCG-GGCCSBCCCSCHHHHHHHHHHHHHHTTTS-EEEECCSBCSSSSCCBCCEEEESCCTTSGGGTSCC
T ss_pred HHHHHHHhccCCCC-ccccccCCCCCHHHHHHHHHHHHHHHHCC-CEEECCccCCCCCcEECCEEEECCCCCCHhhhccc
Confidence 99999999999999 99999999999999999999999999998 89999976334699999999999999999999999
Q ss_pred ccceEEEeeeCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHHhccceeEEEECCcCC--CCCCCCccCCCCCCCCC-cc
Q 015031 314 FGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSIRAGIIWINCYFA--FDSDCPYGGYKMSGFGR-DC 390 (414)
Q Consensus 314 fgPvl~v~~~~~~~eai~~~n~~~~gl~~sv~s~d~~~~~~~~~~l~~g~v~vN~~~~--~~~~~pfgG~~~sG~g~-~~ 390 (414)
||||++|++|+|+||||+++|+++|||++||||+|.+.++++++++++|+|+||++.. ..+.+||||+|.||+|+ .+
T Consensus 419 FGPVl~v~~~~~~~eAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~v~iN~~~~~~~~~~~PfGG~k~SG~G~~~~ 498 (516)
T 1uzb_A 419 FGPVLSVIRVKDFAEALEVANDTPYGLTGGVYSRKREHLEWARREFHVGNLYFNRKITGALVGVQPFGGFKLSGTNAKTG 498 (516)
T ss_dssp CSSEEEEEEESSHHHHHHHHHCSSCCSEEEEECSCHHHHHHHHHHSCCSEEEESSCSCCCCTTTSCBCCSGGGBSCCCBT
T ss_pred cCceEEEEEeCCHHHHHHHHhcCCCCceEEEECCCHHHHHHHHHhCCEeEEEEeCCCCCCCCCCCCCCCcCcCCCCCccc
Confidence 9999999999999999999999999999999999999999999999999999998654 35689999999999994 78
Q ss_pred hHHHHHhhhcccEEEEe
Q 015031 391 GLESLHNYLQVKSVVTP 407 (414)
Q Consensus 391 g~~~~~~~~~~k~i~~~ 407 (414)
|.+++++|+++|+|+.+
T Consensus 499 g~~~l~~f~~~k~v~~~ 515 (516)
T 1uzb_A 499 ALDYLRLFLEMKAVAER 515 (516)
T ss_dssp SHHHHHTTEEEEEEEEE
T ss_pred hHHHHHHcCCeeEEEec
Confidence 99999999999999764
|
| >3ty7_A Putative aldehyde dehydrogenase SAV2122; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE; 2.40A {Staphylococcus aureus} | Back alignment and structure |
|---|
Probab=100.00 E-value=7.1e-89 Score=691.94 Aligned_cols=400 Identities=39% Similarity=0.629 Sum_probs=357.0
Q ss_pred CHHHHHHHHHhHHHHHHHHHHHcCCChHHHhhccHHHHHHHHHHHHHhhhhhcCceeccccCccccccccCCcEEEEEcC
Q 015031 1 MLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMSRALQGYTLREPIGVVGHIIP 80 (414)
Q Consensus 1 L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p 80 (414)
|+++++.|++|+++|++++++|+|||..++...|+..+++.++++++.+++..+.. .....+.+++|+|||++|+|
T Consensus 73 L~~~a~~l~~~~~~la~~~~~e~Gk~~~ea~~~ev~~~~~~~~~~a~~~~~~~~~~----~~~~~~~~~~P~GVv~~I~P 148 (478)
T 3ty7_A 73 LDKIVKEYENRKDDIVQAITDELGAPLSLSERVHYQMGLNHFVAARDALDNYEFEE----RRGDDLVVKEAIGVSGLITP 148 (478)
T ss_dssp HHHHHHHHHHTHHHHHHHHHHHHCCCHHHHHHTHHHHHHHHHHHHHHHHHHCCSEE----EETTEEEEEEECCCEEEECC
T ss_pred HHHHHHHHHHhHHHHHHHHHHHhCCCHHHHhHHHHHHHHHHHHHHHHHHHHhhccc----CCccceEEecCceEEEEECC
Confidence 57899999999999999999999999998657899999999999999887765532 12457889999999999999
Q ss_pred CCcChHhhHHHHHHHHhcCCeEEEecCCCChhHHHHHHHHHHHcCCCCCeEEEEcCCchhHHHHHHhCCCcCeEEEeCCH
Q 015031 81 WNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGST 160 (414)
Q Consensus 81 ~n~P~~~~~~~~~~ALaaGN~vv~kps~~~~~~~~~l~~~~~~aglp~g~v~~~~~~~~~~~~~l~~~~~~~~v~~tGs~ 160 (414)
||||+...++++++||++||+||+|||+.+|.++..+++++.++|+|+|++|++++++.++++.|+.||++|.|.||||+
T Consensus 149 wN~P~~~~~~~~~~ALaaGN~VVlKps~~tp~t~~~l~~~~~~aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~v~fTGS~ 228 (478)
T 3ty7_A 149 WNFPTNQTSLKLAAAFAAGSPVVLKPSEETPFAAVILAEIFDKVGVPKGVFNLVNGDGAGVGNPLSEHPKVRMMSFTGSG 228 (478)
T ss_dssp SSSTTHHHHHHHHHHHHHTCCEEEECCTTSCHHHHHHHHHHHHHTCCTTTEEECCCCTTTTHHHHHHCTTCCEEEECSCH
T ss_pred CcchHHHHHHHHHHHHHcCCeEEEECCCcchHHHHHHHHHHHHhCcCcCeEEEEECCChHHHHHHHhCCCcCEEEEECcH
Confidence 99999999999999999999999999999999999999999999999999999999888899999999999999999999
Q ss_pred HHHHHHHHHHhhCCCCceeeeCCCCCceeecCCCCHHHHHHHHHHHHhcccCCccccCcEEEEeCccHHHHHHHHHHHHh
Q 015031 161 DVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAK 240 (414)
Q Consensus 161 ~~~~~i~~~~~~~~~~~~~~e~gG~~~~iV~~dadl~~a~~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f~~~l~~~~~ 240 (414)
.+|+.|.+.++ ++++|+++|+|||||+||++|||++.|++.+++++|.|+||.|+++++||||++++|+|+++|+++++
T Consensus 229 ~~G~~i~~~aa-~~~~~v~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~~~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~ 307 (478)
T 3ty7_A 229 PTGSKIMEKAA-KDFKKVSLELGGKSPYIVLDDVDIKEAAKATTGKVVNNTGQVCTAGTRVLVPNKIKDAFLAELKEQFS 307 (478)
T ss_dssp HHHCC--CSTT-TTTCEEECCCCCCCEEEECTTSCHHHHHHHHHHHHHGGGGCCTTCCCEEEEETTTHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHH-hcCCceEEecCCCCCcccCCCCCHHHHHHHHHHHHHHhCCCCccCCCeEEEcHHHHHHHHHHHHHHHH
Confidence 99999999887 88999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccCCCCCCCCCccccCCHHHHHHHHHHHHHhhhcCCeEeeCCcccC---CCCceeeeEEEEeCCCCCcccccccccce
Q 015031 241 AWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIG---KKGYYIEPTIFTNVTEDMLIAKNEIFGPV 317 (414)
Q Consensus 241 ~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~---~~g~~~~Ptvl~~~~~~~~~~~~E~fgPv 317 (414)
++++|+|.++++++||+++..+++++++++++++++|+++++||.... ..|+|++|||+.+++++|++++||+||||
T Consensus 308 ~~~~g~p~~~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~~~~gg~~~~~~~~~g~~~~Ptvl~~v~~~~~~~~eE~FGPv 387 (478)
T 3ty7_A 308 QVRVGNPREDGTQVGPIISKKQFDQVQNYINKGIEEGAELFYGGPGKPEGLEKGYFARPTIFINVDNQMTIAQEEIFGPV 387 (478)
T ss_dssp TCCBSCTTSTTCCBCCCSCHHHHHHHHHHHHHHHHHTCEEEECCSSCCTTCCSSCCCCCEEEESCCTTSHHHHSCCCSSE
T ss_pred hccCCCCCCCCCccCCCcCHHHHHHHHHHHHHHHHCCCEEEecCccCccccCCCceeCCEEEecCCCCCcccCceeECce
Confidence 999999999999999999999999999999999999999999994321 37999999999999999999999999999
Q ss_pred EEEeeeCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHHhccceeEEEECCcCCCCCCCCccCCCCCCCCCcchHHHHHh
Q 015031 318 MALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSIRAGIIWINCYFAFDSDCPYGGYKMSGFGRDCGLESLHN 397 (414)
Q Consensus 318 l~v~~~~~~~eai~~~n~~~~gl~~sv~s~d~~~~~~~~~~l~~g~v~vN~~~~~~~~~pfgG~~~sG~g~~~g~~~~~~ 397 (414)
++|++|+|+||||+++|+++|||++||||+|.+.++++++++++|+|+||+ ....+.+||||+|.||+|+++|++|+++
T Consensus 388 l~v~~~~~~~eAi~~an~~~~gL~a~v~t~d~~~a~~~~~~l~~G~v~vN~-~~~~~~~PfGG~k~SG~G~~~G~~~l~~ 466 (478)
T 3ty7_A 388 MSVITYNDLDEAIQIANDTKYGLAGYVIGKDKETLHKVARSIEAGTVEINE-AGRKPDLPFGGYKQSGLGREWGDYGIEE 466 (478)
T ss_dssp EEEEEESSHHHHHHHHTCSSCCSEEEEECSCHHHHHHHHHHSCSSEEEETT-CC----------------------CCGG
T ss_pred eEEEecCCHHHHHHHHhCCCCCceEEEECCCHHHHHHHHHhCCcCeEEECC-CCCCCCCCcCCcCcCcCCccchHHHHHH
Confidence 999999999999999999999999999999999999999999999999999 5566789999999999999999999999
Q ss_pred hhcccEEEE
Q 015031 398 YLQVKSVVT 406 (414)
Q Consensus 398 ~~~~k~i~~ 406 (414)
||+.|+|+.
T Consensus 467 ~t~~k~v~~ 475 (478)
T 3ty7_A 467 FLEVKSIAG 475 (478)
T ss_dssp GEEEEEEET
T ss_pred hcCeEEEEE
Confidence 999999873
|
| >1t90_A MMSDH, probable methylmalonate-semialdehyde dehydrogenase; oxidoreductase, NAD; HET: NAD; 2.50A {Bacillus subtilis} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.9e-88 Score=689.22 Aligned_cols=408 Identities=33% Similarity=0.519 Sum_probs=380.4
Q ss_pred CHHHHHHHHHhHHHHHHHHHHHcCCChHHHhhccHHHHHHHHHHHHHhhhhhcCceec-cccCccccccccCCcEEEEEc
Q 015031 1 MLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLK-MSRALQGYTLREPIGVVGHII 79 (414)
Q Consensus 1 L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~~~~~~~~~~~-~~~~~~~~~~~~P~Gvv~~i~ 79 (414)
|+++++.|++|+++|++++++|+|||..++ ..|+..+++.+++++.+.+...++..+ ...+...+.+++|+|||++|+
T Consensus 71 L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a-~~ev~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~~P~GVV~~I~ 149 (486)
T 1t90_A 71 LFNFQQLLSQHKEELAHLITIENGKNTKEA-LGEVGRGIENVEFAAGAPSLMMGDSLASIATDVEAANYRYPIGVVGGIA 149 (486)
T ss_dssp HHHHHHHHHTTHHHHHHHHHHHHCCCHHHH-HHHHHHHHHHHHHHTTHHHHHCEEEEEEEETTEEEEEEEEECSEEEEEC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCCHHHH-HHHHHHHHHHHHHHHHHHHHhcCcccccCCCCceeEEEecccCEEEEEC
Confidence 578999999999999999999999999975 579999999999998766665554333 123446688999999999999
Q ss_pred CCCcChHhhHHHHHHHHhcCCeEEEecCCCChhHHHHHHHHHHHcCCCCCeEEEEcCCchhHHHHHHhCCCcCeEEEeCC
Q 015031 80 PWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGS 159 (414)
Q Consensus 80 p~n~P~~~~~~~~~~ALaaGN~vv~kps~~~~~~~~~l~~~~~~aglp~g~v~~~~~~~~~~~~~l~~~~~~~~v~~tGs 159 (414)
|||||+...++++++||++||+||+|||+.+|.++..+++++.++|+|+|++|+++| +.+.++.|+.||++|.|.||||
T Consensus 150 PwN~P~~~~~~~~~~ALaaGN~VVlKps~~tp~t~~~l~~l~~~aGlP~gvv~vv~g-~~~~~~~L~~~~~v~~I~fTGS 228 (486)
T 1t90_A 150 PFNFPMMVPCWMFPMAIALGNTFILKPSERTPLLTEKLVELFEKAGLPKGVFNVVYG-AHDVVNGILEHPEIKAISFVGS 228 (486)
T ss_dssp CSSCTTHHHHHHHHHHHHTTCEEEEECCSSSCHHHHHHHHHHHHTTCCTTSEEECCC-SHHHHHHHHHCTTEEEEEEESC
T ss_pred CCchhHHHHHHHHHHHHHcCCEEEEECCCCChHHHHHHHHHHHHhCCCCCEEEEEEC-CHHHHHHHHhCCCCCEEEEeCC
Confidence 999999999999999999999999999999999999999999999999999999999 5678999999999999999999
Q ss_pred HHHHHHHHHHHhhCCCCceeeeCCCCCceeecCCCCHHHHHHHHHHHHhcccCCccccCcE-EEEeCccHHHHHHHHHHH
Q 015031 160 TDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSR-VYVQEGIYDEFEKKLVEK 238 (414)
Q Consensus 160 ~~~~~~i~~~~~~~~~~~~~~e~gG~~~~iV~~dadl~~a~~~i~~~~~~~~Gq~C~a~~~-v~V~~~~~~~f~~~l~~~ 238 (414)
+.+|+.|.+.++ ++++|+++|+|||||+||++|||++.|++.+++++|.|+||.|+++++ +|||++ +|+|+++|+++
T Consensus 229 ~~~g~~i~~~aa-~~~~pv~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvv~v~~~-~d~f~~~l~~~ 306 (486)
T 1t90_A 229 KPVGEYVYKKGS-ENLKRVQSLTGAKNHTIVLNDANLEDTVTNIVGAAFGSAGERCMACAVVTVEEGI-ADEFMAKLQEK 306 (486)
T ss_dssp HHHHHHHHHHHH-HTTCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCCTTCEEEEEEEHHH-HHHHHHHHHHH
T ss_pred HHHHHHHHHHHh-ccCCcEEeccCCCCcEEECCCCCHHHHHHHHHHHHHhCCCCCcccCCeeEEecCC-HHHHHHHHHHH
Confidence 999999999987 789999999999999999999999999999999999999999999999 999999 99999999999
Q ss_pred HhccccCCCCCCCCCccccCCHHHHHHHHHHHHHhhhcCCeEeeCCcccC-CCCceeeeEEEEeCCCCCcccccccccce
Q 015031 239 AKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIG-KKGYYIEPTIFTNVTEDMLIAKNEIFGPV 317 (414)
Q Consensus 239 ~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~-~~g~~~~Ptvl~~~~~~~~~~~~E~fgPv 317 (414)
++++++|+|.++++++||+++..+++++.+++++++++|+++++||.... ..|+|++|||+.+++++|++++||+||||
T Consensus 307 ~~~~~vG~~~~~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~~~~gg~~~~~~~g~~~~Ptvl~~v~~~~~~~~eEiFGPv 386 (486)
T 1t90_A 307 VADIKIGNGLDDGVFLGPVIREDNKKRTLSYIEKGLEEGARLVCDGRENVSDDGYFVGPTIFDNVTTEMTIWKDEIFAPV 386 (486)
T ss_dssp HTTCCBSCTTSTTCCBCCCSCHHHHHHHHHHHHHHHHHTCEEEECSSSSCCSSSSCCCCEEEESCCTTSHHHHSCCCSSE
T ss_pred HHhcccCCCCccCCccCCCCCHHHHHHHHHHHHHHHhCCCEEEeCCccCCCCCCCEECCEEEeCCCCCCHhhcCcccCce
Confidence 99999999999999999999999999999999999999999999997432 36899999999999999999999999999
Q ss_pred EEEeeeCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHHhccceeEEEECCcCC-CCCCCCccCCCCCCCC--CcchHHH
Q 015031 318 MALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSIRAGIIWINCYFA-FDSDCPYGGYKMSGFG--RDCGLES 394 (414)
Q Consensus 318 l~v~~~~~~~eai~~~n~~~~gl~~sv~s~d~~~~~~~~~~l~~g~v~vN~~~~-~~~~~pfgG~~~sG~g--~~~g~~~ 394 (414)
++|++|+|+||||+++|+++|||++||||+|.+.++++++++++|+|+||++.. ..+.+||||+|.||+| +++|++|
T Consensus 387 l~v~~~~~~~eai~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~v~vN~~~~~~~~~~PfGG~k~SG~G~~~~~g~~g 466 (486)
T 1t90_A 387 LSVIRVKNLKEAIEIANKSEFANGACLFTSNSNAIRYFRENIDAGMLGINLGVPAPMAFFPFSGWKSSFFGTLHANGKDS 466 (486)
T ss_dssp EEEEEESSHHHHHHHHHHSSEESEEEEECCBHHHHHHHHHHCCCSEEEESCSCCCCCTTSCCCCEETTEESSSCSSHHHH
T ss_pred EEEEEeCCHHHHHHHHhCCCCCeEEEEEcCCHHHHHHHHHhCCcCeEEECCCCCCCCCCCCcCCCCcCCCCCCccchHHH
Confidence 999999999999999999999999999999999999999999999999998644 3467999999999999 8999999
Q ss_pred HHhhhcccEEEEeCCCCC
Q 015031 395 LHNYLQVKSVVTPIFNSP 412 (414)
Q Consensus 395 ~~~~~~~k~i~~~~~~~~ 412 (414)
+++|++.|+|+.+++...
T Consensus 467 ~~~~~~~k~v~~~~~~~~ 484 (486)
T 1t90_A 467 VDFYTRKKVVTARYPAPD 484 (486)
T ss_dssp HHHTEEEEEEEEECCCCC
T ss_pred HHHhhceEEEEEecCCCC
Confidence 999999999998875543
|
| >3sza_A Aldehyde dehydrogenase, dimeric NADP-preferring; ALDH, rossmann fold, oxidoreductase; 1.48A {Homo sapiens} SCOP: c.82.1.1 PDB: 3szb_A* 1ad3_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.6e-87 Score=675.98 Aligned_cols=397 Identities=26% Similarity=0.402 Sum_probs=366.0
Q ss_pred CHHHHHHHHHhHHHHHHHHHHHcCCChHHHhhccHHHHHHHHHHHHHhhhhhcCce----eccccCccccccccCCcEEE
Q 015031 1 MLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEV----LKMSRALQGYTLREPIGVVG 76 (414)
Q Consensus 1 L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~~~~~~~~~----~~~~~~~~~~~~~~P~Gvv~ 76 (414)
|+++++.|++|+++|++++++|+|||..++...|+..+++.++++++...+..... .....+...+++++|+|||+
T Consensus 46 L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea~~~ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~ 125 (469)
T 3sza_A 46 LEALQRLIQEQEQELVGALAADLHKNEWNAYYEEVVYVLEEIEYMIQKLPEWAADEPVEKTPQTQQDELYIHSEPLGVVL 125 (469)
T ss_dssp HHHHHHHHHHTHHHHHHHHHHHHCCCHHHHHHTTHHHHHHHHHHHHHHHHHHHSCEECCCCGGGTTSEEEEEEEECSEEE
T ss_pred HHHHHHHHHHhHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhcccccCccccCCCccceeeccCCCEEE
Confidence 57899999999999999999999999998766799999998888876654432211 11122446788999999999
Q ss_pred EEcCCCcChHhhHHHHHHHHhcCCeEEEecCCCChhHHHHHHHHHHHcCCCCCeEEEEcCCchhHHHHHHhCCCcCeEEE
Q 015031 77 HIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSF 156 (414)
Q Consensus 77 ~i~p~n~P~~~~~~~~~~ALaaGN~vv~kps~~~~~~~~~l~~~~~~aglp~g~v~~~~~~~~~~~~~l~~~~~~~~v~~ 156 (414)
+|+|||||+...++++++||++||+||+|||+.+|.++..+++++.++ +|+|++|+++|+ .+.+..|+.| ++|.|.|
T Consensus 126 ~I~PwN~P~~~~~~~~~~ALaaGN~vVlKps~~tp~t~~~l~~l~~~a-lP~gvv~vv~g~-~~~~~~ll~~-~vd~I~F 202 (469)
T 3sza_A 126 VIGTWNYPFNLTIQPMVGAIAAGNAVVLKPSELSENMASLLATIIPQY-LDKDLYPVINGG-VPETTELLKE-RFDHILY 202 (469)
T ss_dssp EECCSSSTTHHHHHHHHHHHHTTCEEEEECCTTSHHHHHHHHHHHHHH-SCTTTSCBCCCS-HHHHHHHTTS-CCSEEEE
T ss_pred EECCCcchHHHHHHHHHHHHHcCCEEEEECCCCChHHHHHHHHHHHHh-CCcceEEEEECC-HHHHHHHHhc-CCCEEEE
Confidence 999999999999999999999999999999999999999999999999 999999999994 4556677777 7999999
Q ss_pred eCCHHHHHHHHHHHhhCCCCceeeeCCCCCceeecCCCCHHHHHHHHHHHHhcccCCccccCcEEEEeCccHHHHHHHHH
Q 015031 157 TGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLV 236 (414)
Q Consensus 157 tGs~~~~~~i~~~~~~~~~~~~~~e~gG~~~~iV~~dadl~~a~~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f~~~l~ 236 (414)
|||+.+|+.|.+.++ ++++|+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||++++|+|+++|+
T Consensus 203 TGS~~vG~~i~~~aa-~~lkpv~lELGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~ 281 (469)
T 3sza_A 203 TGSTGVGKIIMTAAA-KHLTPVTLELGGKSPCYVDKNCDLDVACRRIAWGKFMNSGQTCVAPDYILCDPSIQNQIVEKLK 281 (469)
T ss_dssp ESCHHHHHHHHHHHH-TTTCCEEEECCCCCEEEECTTSCHHHHHHHHHHHHHGGGGCCTTSCCEEEECGGGHHHHHHHHH
T ss_pred ECCHHHHHHHHHHHh-hccCceEEecCCCCceEECCCCCHHHHHHHHHHHHHhcCCCCCCCCcEEEEehhHHHHHHHHHH
Confidence 999999999999988 8899999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhccccCCCCCCCCCccccCCHHHHHHHHHHHHHhhhcCCeEeeCCcccCCCCceeeeEEEEeCCCCCcccccccccc
Q 015031 237 EKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIGKKGYYIEPTIFTNVTEDMLIAKNEIFGP 316 (414)
Q Consensus 237 ~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgP 316 (414)
++++++ +|+|.++++++||+++..+++++++++ +|+++++||... .+|+|++|||+.+++++|++++||+|||
T Consensus 282 ~~~~~~-~g~~~~~~~~~gpli~~~~~~rv~~~i-----~ga~v~~GG~~~-~~g~~~~PTvl~~v~~~~~i~~eEiFGP 354 (469)
T 3sza_A 282 KSLKEF-YGEDAKKSRDYGRIISARHFQRVMGLI-----EGQKVAYGGTGD-AATRYIAPTILTDVDPQSPVMQEEIFGP 354 (469)
T ss_dssp HHHHHH-HCSCGGGCTTCCCCSCHHHHHHHHHHH-----TTSEEEECCCEE-TTTTEECCEEEESCCTTSGGGTSCCCSS
T ss_pred HHHHHh-cCCCCcccCcccccCCHHHHHHHHHHH-----cCCEEEeCCccC-CCCceeCCeeecCCCCcchhhhccccCC
Confidence 999988 599999999999999999999999998 589999999875 3799999999999999999999999999
Q ss_pred eEEEeeeCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHHhccceeEEEECCcCC--CCCCCCccCCCCCCCCCcchHHH
Q 015031 317 VMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSIRAGIIWINCYFA--FDSDCPYGGYKMSGFGRDCGLES 394 (414)
Q Consensus 317 vl~v~~~~~~~eai~~~n~~~~gl~~sv~s~d~~~~~~~~~~l~~g~v~vN~~~~--~~~~~pfgG~~~sG~g~~~g~~~ 394 (414)
|++|++|+|+||||+++|+++|||++||||+|.+.++++++++++|.|+||++.. ..+.+||||+|.||+|+++|.+|
T Consensus 355 Vl~v~~~~~~deAi~~aN~~~~gLaa~v~t~d~~~a~~~~~~l~~G~V~vN~~~~~~~~~~~PfGG~k~SG~Gr~~G~~g 434 (469)
T 3sza_A 355 VLPIVCVRSLEEAIQFINQREKPLALYMFSSNDKVIKKMIAETSSGGVAANDVIVHITLHSLPFGGVGNSGMGSYHGKKS 434 (469)
T ss_dssp EEEEEECSSHHHHHHHHHHSCCCSEEEEECSCHHHHHHHHHHCCCSEEEESCSSGGGSCTTSCBCCCGGGEECCBSTHHH
T ss_pred eEEEEecCCHHHHHHHHHcCCCCceEEEECCCHHHHHHHHHhCCcceEEEeCCCCCCCCCCCCcCCccccccCccchHHH
Confidence 9999999999999999999999999999999999999999999999999999863 46889999999999999999999
Q ss_pred HHhhhcccEEEEeC
Q 015031 395 LHNYLQVKSVVTPI 408 (414)
Q Consensus 395 ~~~~~~~k~i~~~~ 408 (414)
+++||+.|+|+.+.
T Consensus 435 ~~~ft~~K~v~~~~ 448 (469)
T 3sza_A 435 FETFSHRRSCLVRP 448 (469)
T ss_dssp HHHTEEEEEEEECC
T ss_pred HHHhhCeeEEEECC
Confidence 99999999998753
|
| >4h7n_A Aldehyde dehydrogenase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, ALDH_ddaldh, COG1012, glyco_hydro_97; 2.00A {Anabaena variabilis} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.6e-87 Score=680.93 Aligned_cols=408 Identities=31% Similarity=0.493 Sum_probs=377.1
Q ss_pred CHHHHHHHHHhHHHHHHHHHHHcCCChHHHhhccHHHHHHHHHHHHHhhhhhcCceec-c-ccCccccccccCCcEEEEE
Q 015031 1 MLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLK-M-SRALQGYTLREPIGVVGHI 78 (414)
Q Consensus 1 L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~~~~~~~~~~~-~-~~~~~~~~~~~P~Gvv~~i 78 (414)
|+++++.|++|+++|++++++|+||+..+ ..|+...++.+++++..+.+....... . ..+......++|+|||++|
T Consensus 56 L~~~a~~l~~~~~ela~~~~~e~Gk~~~~--~~ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I 133 (474)
T 4h7n_A 56 LQQWKQAILSRREQLTEALVNDTGRLSIT--VLEIDSFLASIDRWCGLAPELLQTSAKNTSIPFIALQQSLVPYPLVGVI 133 (474)
T ss_dssp HHHHHHHHHTTHHHHHHHHHHHHSCSHHH--HHHHHHHHHHHHHHHHHHHHHHCCEEEECSSTTEEEEEEEEECSEEEEE
T ss_pred HHHHHHHHHHHHHHHHHHHHHHcCCcHHH--HHHHHHHHHHHHHHHhhhhhcccccccCCCCCCccceEEEEeccEEEEE
Confidence 57899999999999999999999998653 469999999999998877665443222 1 1344556778899999999
Q ss_pred cCCCcChHhhHHHHHHHHhcCCeEEEecCCCChhHHHHHHHHHHHcCCCCCeEEEEcCCchhHHHHHHhCCCcCeEEEeC
Q 015031 79 IPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTG 158 (414)
Q Consensus 79 ~p~n~P~~~~~~~~~~ALaaGN~vv~kps~~~~~~~~~l~~~~~~aglp~g~v~~~~~~~~~~~~~l~~~~~~~~v~~tG 158 (414)
+|||||+...++++++||++||+||+|||+.+|.++..+.+++.++|+|+|+++++++ +.+.+..|..| +|.|.|||
T Consensus 134 ~PwNfP~~~~~~~~~~ALaaGN~VVlKps~~tp~~~~~l~~~~~~ag~p~gv~~~v~g-~~~~~~~l~~~--v~~v~FTG 210 (474)
T 4h7n_A 134 SPWNFPLTLSMIDTIPALLAGCAVVVKPSEIAPRFVAPLLMALNTVPELRDVLIFVEG-GGETGANLINY--VDFVCFTG 210 (474)
T ss_dssp ECSSSHHHHHHTTHHHHHHHTCEEEEEECTTSCTTHHHHHHHHTTCTTTTTTEEECCC-CHHHHHHHHTT--CSEEEEES
T ss_pred CCCCcHHHHHhcccCcchhcCCceeecccccCchHHHHHHhhhhhhcccccceeeccc-cchhhhhhhhc--cceEEecc
Confidence 9999999999999999999999999999999999999999999999999999999999 56788888865 89999999
Q ss_pred CHHHHHHHHHHHhhCCCCceeeeCCCCCceeecCCCCHHHHHHHHHHHHhcccCCccccCcEEEEeCccHHHHHHHHHHH
Q 015031 159 STDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEK 238 (414)
Q Consensus 159 s~~~~~~i~~~~~~~~~~~~~~e~gG~~~~iV~~dadl~~a~~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f~~~l~~~ 238 (414)
|+.+|+.|.+.++ ++++|+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|+|||++++|+|+++|+++
T Consensus 211 S~~~G~~i~~~aa-~~~~~v~lElGGk~p~iV~~dAdl~~aa~~i~~~~~~n~GQ~C~a~~rv~V~~~i~d~f~~~l~~~ 289 (474)
T 4h7n_A 211 SVATGREVAETAA-RRFIPAYLELGGKDPAIVLESANLELATSAILWGAVVNTGQSCLSIERIYVAESKFEEFYHQLIAK 289 (474)
T ss_dssp CHHHHHHHHHHHH-HHTCCEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCSTTCEEEEEEEGGGHHHHHHHHHHH
T ss_pred ccchhhhhhhhhh-cccccccccCCCcCccccCchhhHHHHHHHHHhhhccCCCCceeecccccchHHHHHHHHHHHHHH
Confidence 9999999999988 789999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhccccCCCCCCCCCccccCCHHHHHHHHHHHHHhhhcCCeEeeCCcccC-CCCceeeeEEEEeCCCCCcccccccccce
Q 015031 239 AKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIG-KKGYYIEPTIFTNVTEDMLIAKNEIFGPV 317 (414)
Q Consensus 239 ~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~-~~g~~~~Ptvl~~~~~~~~~~~~E~fgPv 317 (414)
++++++|+|.++++++||+++..+++++.+++++++++|+++++||.... .+|+|++|||+.+++++|++++||+||||
T Consensus 290 ~~~~~~g~p~~~~~~~gpli~~~~~~~v~~~i~~a~~~ga~v~~Gg~~~~~~~g~~~~Ptv~~~v~~~~~i~~eEiFGPV 369 (474)
T 4h7n_A 290 AHRLQLAYPLVEDGAIGPIIAEKQAGIINDHILDAVEKGAVIHCGGKVEELGGGWWCRPTVMTNVNHSMKVMTEETFGPI 369 (474)
T ss_dssp HHHCCBCCSSGGGCSBCCCSSHHHHHHHHHHHHHHHHTTCEEEECCCCEEETTEEECCCEEEESCCTTSGGGTSCCCSSE
T ss_pred hhccccCCCcccccccCccccHHHHHHHHHHHHHHHhhCceeccCCcccccCCCcccCceeEEeeccccccccccccCcE
Confidence 99999999999999999999999999999999999999999999998653 47899999999999999999999999999
Q ss_pred EEEeeeCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHHhccceeEEEECCcCC--CCCCCCccCCCCCCCC-CcchHHH
Q 015031 318 MALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSIRAGIIWINCYFA--FDSDCPYGGYKMSGFG-RDCGLES 394 (414)
Q Consensus 318 l~v~~~~~~~eai~~~n~~~~gl~~sv~s~d~~~~~~~~~~l~~g~v~vN~~~~--~~~~~pfgG~~~sG~g-~~~g~~~ 394 (414)
++|++|+|+||||+++|+++|||++||||+|.+.++++++++++|+|+||+... ..+..||||+|.||+| +.+|.+|
T Consensus 370 l~v~~~~~~deAi~~aN~~~~GL~a~v~t~d~~~a~~~a~~l~aG~v~iN~~~~~~~~~~~pfgG~~~SG~G~~~~G~~g 449 (474)
T 4h7n_A 370 MPVMPFPDVEEAVYLANDTIYGLSAAVFAGSEDEALKVARQLNAGAISINDAALTAMMHEGEKNAFNFSGLGGSRVGAAG 449 (474)
T ss_dssp EEEEEESSHHHHHHHHHCSSCCSEEEEECSSHHHHHHHHTTSCCSEEEESSSCGGGTCCCSCCCCCGGGEESCCSSTTHH
T ss_pred EEEEEECCHHHHHHHHHcCCCCCeEEEEeCCHHHHHHHHHhCCeeEEEECCCCccCCcCCCCCCCcCCCCCCCCcchHHH
Confidence 999999999999999999999999999999999999999999999999999765 4578999999999998 7889999
Q ss_pred HHhhhcccEEEEeCC--CCCCC
Q 015031 395 LHNYLQVKSVVTPIF--NSPWL 414 (414)
Q Consensus 395 ~~~~~~~k~i~~~~~--~~~~~ 414 (414)
+++|+++|+|+++.. ..||+
T Consensus 450 ~~~f~~~k~v~~~~~~~~~p~w 471 (474)
T 4h7n_A 450 LKRFLRKQAFLIKTNSTSDPWW 471 (474)
T ss_dssp HHTTEEEEEEEEECSSSCCTTS
T ss_pred HHHhCeEEEEEECCCCCCCCCC
Confidence 999999999998753 45653
|
| >4e3x_A Delta-1-pyrroline-5-carboxylate dehydrogenase, mitochondrial; amino acid metabolism, proline inhibition, oxidoreductase; HET: 16P PGE; 1.24A {Mus musculus} PDB: 3v9k_A* 3v9l_A* 3v9j_A* 3v9g_A 3v9h_A 3v9i_A | Back alignment and structure |
|---|
Probab=100.00 E-value=7.4e-87 Score=684.66 Aligned_cols=407 Identities=26% Similarity=0.425 Sum_probs=377.0
Q ss_pred CHHHHHHHHHh-HHHHHHHHHHHcCCChHHHhhccHHHHHHHHHHHHHhhhhhcCcee-ccccCccccccccCCcEEEEE
Q 015031 1 MLKFADLIEEH-AEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVL-KMSRALQGYTLREPIGVVGHI 78 (414)
Q Consensus 1 L~~~a~~l~~~-~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~~~~~~~~~~-~~~~~~~~~~~~~P~Gvv~~i 78 (414)
|+++++.|+++ +++|++++++|+|||..++...++..+++.+++++..+++..+... ..+.+...+.++.|+|||++|
T Consensus 128 L~~~a~~l~~~~~~el~~~~~~e~Gk~~~ea~~e~v~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~r~p~GVV~~I 207 (563)
T 4e3x_A 128 FLKAADMLSGPRRAEVLAKTMVGQGKTVIQAEIDAAAELIDFFRFNAKFAVELEGEQPISVPPSTNHTVYRGLEGFVAAI 207 (563)
T ss_dssp HHHHHHHHHTTTHHHHHHHHHHHHCCCHHHHHHHTTHHHHHHHHHHHHHHHHHTTCCCCCCTTEEEEEECCBCSSEEEEE
T ss_pred HHHHHHHHHhccHHHHHHHHHHHcCCCHHHHhHHHHHHHHHHHHHHHHHHHHhhCCCccCCCCCcceEEEecCceEEEEE
Confidence 57899999999 9999999999999999986443499999999999999887765422 112234456778889999999
Q ss_pred cCCCcChHhhHHHHHHHHhcCCeEEEecCCCChhHHHHHHHHHHHcCCCCCeEEEEcCCchhHHHHHHhCCCcCeEEEeC
Q 015031 79 IPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTG 158 (414)
Q Consensus 79 ~p~n~P~~~~~~~~~~ALaaGN~vv~kps~~~~~~~~~l~~~~~~aglp~g~v~~~~~~~~~~~~~l~~~~~~~~v~~tG 158 (414)
+|||||+....+++++|| +||+||+|||+.+|+++..+++++.++|+|+|++|+++|++.++++.|+.||+++.|.|||
T Consensus 208 ~PwNfP~~~~~~~~apAL-aGNtVVlKPs~~tp~sa~~l~~ll~eAGlP~Gvvnvv~g~g~~~g~~L~~hp~v~~I~FTG 286 (563)
T 4e3x_A 208 SPFNFTAIGGNLAGAPAL-MGNVVLWKPSDTAMLASYAVYRILREAGLPPNIIQFVPADGPTFGDTVTSSEHLCGINFTG 286 (563)
T ss_dssp CCSSCHHHHHHHHHHHHH-TTCCEEEECCGGGHHHHHHHHHHHHHTTCCTTSEEECCCCHHHHHHHHTTCTTEEEEEEES
T ss_pred CCchHHHHHHHHHHHHhh-cCCEEEEECCCCChHHHHHHHHHHHHhCCCCCeEEEEeCCcHHHHHHHHhCCCcCEEEEEC
Confidence 999999999999999999 5999999999999999999999999999999999999998888999999999999999999
Q ss_pred CHHHHHHHHHHHhhCCCC------ceeeeCCCCCceeecCCCCHHHHHHHHHHHHhcccCCccccCcEEEEeCccHHHHH
Q 015031 159 STDVGRQVMQAAATSNLK------PVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFE 232 (414)
Q Consensus 159 s~~~~~~i~~~~~~~~~~------~~~~e~gG~~~~iV~~dadl~~a~~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f~ 232 (414)
|+.+|+.|.+.++ ++++ |+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|+|||+++||+|+
T Consensus 287 St~vG~~i~~~aa-~~lk~~~~~prv~lElGGk~p~IV~~dADld~Aa~~iv~~~f~~~GQ~C~A~~rv~V~~si~d~f~ 365 (563)
T 4e3x_A 287 SVPTFKHLWRQVA-QNLDRFRTFPRLAGECGGKNFHFVHSSADVDSVVSGTLRSAFEYGGQKCSACSRLYVPKSLWPQIK 365 (563)
T ss_dssp CHHHHHHHHHHHH-HTTTTCSSCCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCSTTCEEEEEEEGGGHHHHH
T ss_pred CHHHHHHHHHHHH-hhCCccccCCceeccCCCCCceeeCCCCCHHHHHHHHHHHHHhcCCCCCcCCcEEEEecchHHHHH
Confidence 9999999999987 6666 59999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhccccCCC-CCCCCCccccCCHHHHHHHHHHHHHhhh-cCCeEeeCCcccCCCCceeeeEEEEeCCCCCcccc
Q 015031 233 KKLVEKAKAWVVGDP-FDPAVRQGPQVDKKQFDRILSYIEHGKR-EGATLLTGGKPIGKKGYYIEPTIFTNVTEDMLIAK 310 (414)
Q Consensus 233 ~~l~~~~~~~~~g~~-~~~~~~~gpl~~~~~~~~~~~~i~~a~~-~ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~ 310 (414)
++|+++++++++|+| .|+++++||++++.+++++.++|+++++ +|+++++||..+...|+|++|||+.+++++|++++
T Consensus 366 ~~l~~~~~~l~vGdp~~d~~~~~Gpli~~~~~~rv~~~i~~a~~~~ga~v~~GG~~~~~~G~fv~PTvl~~v~~~~~i~~ 445 (563)
T 4e3x_A 366 GRLLEEHSRIKVGDPAEDFGTFFSAVIDAKAFARIKKWLEHARSSPSLSILAGGQCNESVGYYVEPCIIESKDPQEPIMK 445 (563)
T ss_dssp HHHHHHHHTCCBSCTTTCTTCSBCCCSCHHHHHHHHHHHHHHHHCTTEEEEECCCEECSSSCEECCEEEEESCTTCGGGT
T ss_pred HHHHHHHHhccCCCcccCcCCccCCCcCHHHHHHHHHHHHHHhhcCCCEEEeCCccCCCCCcEecCEEEecCCCCChhhc
Confidence 999999999999999 9999999999999999999999999996 89999999987666899999999999999999999
Q ss_pred cccccceEEEeeeCC--HHHHHHHH-hcCCCCceEEEecCCHHHHHHHHhccc--eeEEEECCcCC--CCCCCCccCCCC
Q 015031 311 NEIFGPVMALMKFKT--VEEAIKSA-NNTRYGLAAGIMTKDLNVANTVSRSIR--AGIIWINCYFA--FDSDCPYGGYKM 383 (414)
Q Consensus 311 ~E~fgPvl~v~~~~~--~~eai~~~-n~~~~gl~~sv~s~d~~~~~~~~~~l~--~g~v~vN~~~~--~~~~~pfgG~~~ 383 (414)
||+||||++|++|+| +||||+++ |+++|||+++|||+|.+.+++++++++ +|+|+||+.++ ..+.+||||+|.
T Consensus 446 eEiFGPVl~V~~~~d~~~deAi~~ann~s~yGLta~V~t~d~~~~~~~~~~l~~~aG~v~IN~~~~~~~~~~~PFGG~k~ 525 (563)
T 4e3x_A 446 EEIFGPVLTVYVYPDDKYRETLKLVDSTTSYGLTGAVFAQDKAIVQEATRMLRNAAGNFYINDKSTGSVVGQQPFGGARA 525 (563)
T ss_dssp SCCCSSEEEEEEECGGGHHHHHHHHHHSSSEESEEEEECSCHHHHHHHHHHTTTTCSEEEESSCSCCCCTTTSCCCCEET
T ss_pred CCCcCeEEEEEEECCCCHHHHHHHHHcCCCCCCEEEEEeCCHHHHHHHHHhhhcCeeEEEEcCCCCCCCcCCCCCCCccc
Confidence 999999999999997 79999999 789999999999999999999999976 99999999764 356899999999
Q ss_pred CCCC-CcchHHHHHhhhcccEEEEeCC
Q 015031 384 SGFG-RDCGLESLHNYLQVKSVVTPIF 409 (414)
Q Consensus 384 sG~g-~~~g~~~~~~~~~~k~i~~~~~ 409 (414)
||+| +.+|++++++|+++|+|..+..
T Consensus 526 SG~g~~~~G~~~l~~~~~~k~v~~~~~ 552 (563)
T 4e3x_A 526 SGTNDKPGGPHYILRWTSPQVIKETHK 552 (563)
T ss_dssp TBCCCCTTSTTGGGGGBCCEEEEEECS
T ss_pred cCCCCccCCHHHHHHhCceEEEEEeCc
Confidence 9998 8999999999999999988763
|
| >3lns_A Benzaldehyde dehydrogenase; oxidoreductase, NADP+, class 3 aldehyde dehyd adduct, covalent catalysis, mandelate racemase pathway; HET: ZBZ NAP; 2.50A {Pseudomonas putida} PDB: 3lv1_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.8e-85 Score=663.03 Aligned_cols=394 Identities=28% Similarity=0.448 Sum_probs=366.2
Q ss_pred CHHHHHHHHHhHHHHHHHHHHHcCCChHHHhhccHHHHHHHHHHHHHhhhhhcCc-eecc---ccCccccccccCCcEEE
Q 015031 1 MLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGE-VLKM---SRALQGYTLREPIGVVG 76 (414)
Q Consensus 1 L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~~~~~~~~-~~~~---~~~~~~~~~~~P~Gvv~ 76 (414)
|+++++.|++|+++|++++++|+|||..++...|+..+++.++++++.+++.... .... ..+...+.+++|+|||+
T Consensus 56 L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea~~~ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~ 135 (457)
T 3lns_A 56 LERLKEAVINNKEALYSALAEDLGKPKDVVDLAEIGAVLHEIDFALAHLDEWVAPVSVPSPDIIAPSECYVVQEPYGVTY 135 (457)
T ss_dssp HHHHHHHHHTTHHHHHHHHHHHHCCCHHHHHHHTHHHHHHHHHHHHHHHHHHTSCEEECCCGGGCSCEEEEEEEECCEEE
T ss_pred HHHHHHHHHHhHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhccccccccccCCCcceEEEeecceEEE
Confidence 5789999999999999999999999999865469999999999999887765432 2211 13456789999999999
Q ss_pred EEcCCCcChHhhHHHHHHHHhcCCeEEEecCCCChhHHHHHHHHHHHcCCCCCeEEEEcCCchhHHHHHHhCCCcCeEEE
Q 015031 77 HIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSF 156 (414)
Q Consensus 77 ~i~p~n~P~~~~~~~~~~ALaaGN~vv~kps~~~~~~~~~l~~~~~~aglp~g~v~~~~~~~~~~~~~l~~~~~~~~v~~ 156 (414)
+|+|||||+...++++++||++||+||+|||+.+|.++..+++++.++ +|+|++|+++| +.+.+..|+. +++|.|.|
T Consensus 136 ~I~PwN~P~~~~~~~~~~ALaaGN~VVlKps~~tp~t~~~l~~l~~~a-lP~gvv~vv~g-~~~~~~~L~~-~~vd~V~f 212 (457)
T 3lns_A 136 IIGPFNYPVNLTLTPLIGAIIGGNTCIIKPSETTPETSAVIEKIIAEA-FAPEYVAVIQG-GRDENSHLLS-LPFDFIFF 212 (457)
T ss_dssp EECCSSSTTHHHHHHHHHHHHTTCEEEEECCTTCHHHHHHHHHHHHHH-CCTTTEEECCC-CHHHHHHHTT-SCCSEEEE
T ss_pred EECCCcchHHHHHHHHHHHHHcCCEEEEECCCCChHHHHHHHHHHHHh-CCHhhEEEecC-CHHHHHHHhc-CCCCEEEE
Confidence 999999999999999999999999999999999999999999999999 99999999999 6788999988 78999999
Q ss_pred eCCHHHHHHHHHHHhhCCCCceeeeCCCCCceeecCCCCHHHHHHHHHHHHhcccCCccccCcEEEEeCccHHHHHHHHH
Q 015031 157 TGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLV 236 (414)
Q Consensus 157 tGs~~~~~~i~~~~~~~~~~~~~~e~gG~~~~iV~~dadl~~a~~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f~~~l~ 236 (414)
|||+.+|+.|.+.++ ++++|+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||++++|+|+++|+
T Consensus 213 TGS~~~G~~i~~~aa-~~l~pv~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~ 291 (457)
T 3lns_A 213 TGSPNVGKVVMQAAA-KHLTPVVLELGGKCPLIVLPDADLDQTVNQLMFGKFINSGQTXIAPDYLYVHYSVKDALLERLV 291 (457)
T ss_dssp ESCHHHHHHHHHHHH-TTTCCEEEECCCCEEEEECTTCCHHHHHHHHHHHHHGGGGCCTTSEEEEEEEGGGHHHHHHHHH
T ss_pred ECCHHHHHHHHHHHh-hccCceEEECCCCCCCeECCCCCHHHHHHHHHHHHHHhCCCCccCCceEEEcHHHHHHHHHHHH
Confidence 999999999999988 8899999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhccccCCCCCCCCCccccCCHHHHHHHHHHHHHhhhcCCeEeeCCcccCCCCceeeeEEEEeCCCCCcccccccccc
Q 015031 237 EKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIGKKGYYIEPTIFTNVTEDMLIAKNEIFGP 316 (414)
Q Consensus 237 ~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgP 316 (414)
+++++++ |.++ ++||++++.++++++++++++. +++++||... .+|+|++|||+.+++++|++++||+|||
T Consensus 292 ~~~~~~~---p~~~--~~gpli~~~~~~rv~~~i~~a~---~~~~~gg~~~-~~g~~~~Ptvl~~v~~~~~i~~eEiFGP 362 (457)
T 3lns_A 292 ERVKTEL---PEIN--STGKLVTERQVQRLVSLLEATQ---GQVLVGSQAD-VSKRALSATVVDGVEWNDPLMSEELFGP 362 (457)
T ss_dssp HHHHHHC---CSTT--TTCCCSSHHHHHHHHHHHHHCC---SEEEECCCEE-GGGTEECCEEEESCCTTSGGGSSCCCSS
T ss_pred HHHHhcC---CCcc--cccCCCCHHHHHHHHHHHHhcC---CeEEeCCccC-CCCceeCCEEEecCCCCChhhcCcccCc
Confidence 9999987 6665 9999999999999999999864 5999999764 3789999999999999999999999999
Q ss_pred eEEEeeeCCHHHHHHHHhc-CCCCceEEEecCCHHHHHHHHhccceeEEEECCcCC--CCCCCCccCCCCCCCCCcchHH
Q 015031 317 VMALMKFKTVEEAIKSANN-TRYGLAAGIMTKDLNVANTVSRSIRAGIIWINCYFA--FDSDCPYGGYKMSGFGRDCGLE 393 (414)
Q Consensus 317 vl~v~~~~~~~eai~~~n~-~~~gl~~sv~s~d~~~~~~~~~~l~~g~v~vN~~~~--~~~~~pfgG~~~sG~g~~~g~~ 393 (414)
|++|++|+|+||||+++|+ ++|||+++|||+|.+.++++++++++|+|+||++.. ..+.+||||+|.||+|+++|.+
T Consensus 363 Vl~v~~~~~~deAi~~aN~~~~~gL~a~v~t~d~~~a~~~~~~l~aG~v~vN~~~~~~~~~~~PfGG~k~SG~G~~~g~~ 442 (457)
T 3lns_A 363 ILPVLEFDSVRTAIDQVNKHHPKPLAVYVFGKDMDVAKGIINQIQSGDAQVNGVMLHAFSPYLPFGGIGASGMGEYHGHF 442 (457)
T ss_dssp EEEEEEESCHHHHHHHHHHHSCSCSEEEEECSCHHHHHHHHHTSCCSEEEESCCSGGGGCTTSCBCCCGGGEECCBSHHH
T ss_pred EEEEEEeCCHHHHHHHHHcCCCCCeEEEEECCCHHHHHHHHHhCCcceEEEcCCCCCCCCCCCCcCCcCcCCCCCCchHH
Confidence 9999999999999999999 999999999999999999999999999999999853 4688999999999999999999
Q ss_pred HHHhhhcccEEEEe
Q 015031 394 SLHNYLQVKSVVTP 407 (414)
Q Consensus 394 ~~~~~~~~k~i~~~ 407 (414)
|+++||+.|+|++.
T Consensus 443 ~~~~f~~~k~v~~~ 456 (457)
T 3lns_A 443 SYLTFTHKKSVRIV 456 (457)
T ss_dssp HHHHTEEEEEEEEC
T ss_pred HHHHhhCeeEEEeC
Confidence 99999999998763
|
| >3ju8_A Succinylglutamic semialdehyde dehydrogenase; alpha-beta structure, structural genomics, PSI-2, protein ST initiative; HET: NAD; 1.82A {Pseudomonas aeruginosa} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.9e-85 Score=666.47 Aligned_cols=398 Identities=27% Similarity=0.401 Sum_probs=372.6
Q ss_pred CHHHHHHHHHhHHHHHHHHHHHcCCChHHHhhccHHHHHHHHHHHHHhhhhhcCceeccccCccccccccCCcEEEEEcC
Q 015031 1 MLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMSRALQGYTLREPIGVVGHIIP 80 (414)
Q Consensus 1 L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p 80 (414)
|+++++.|++|+++|++++++|+|||..++ ..|+..+++.+++++...++..+...+...+...+.+++|+|||++|+|
T Consensus 70 L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea-~~ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~P 148 (490)
T 3ju8_A 70 LERFAATLKSRADELARVIGEETGKPLWES-ATEVTSMVNKVAISVQAFRERTGEKSGPLADATAVLRHKPHGVVAVFGP 148 (490)
T ss_dssp HHHHHHHHHHTHHHHHHHHHHHHCCCHHHH-HHHHHHHHHHHHHHHHHHHHHSCCEEEEETTEEEEEEEEECSEEEEECC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCCHHHH-HHHHHHHHHHHHHHHHHHHHhcCCccccCCCCeeeEEECCCCEEEEECC
Confidence 578999999999999999999999999975 5799999999999998887766554332233455677999999999999
Q ss_pred CCcChHhhHHHHHHHHhcCCeEEEecCCCChhHHHHHHHHHHHcCCCCCeEEEEcCCchhHHHHHHhCCCcCeEEEeCCH
Q 015031 81 WNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGST 160 (414)
Q Consensus 81 ~n~P~~~~~~~~~~ALaaGN~vv~kps~~~~~~~~~l~~~~~~aglp~g~v~~~~~~~~~~~~~l~~~~~~~~v~~tGs~ 160 (414)
||||+...++++++||++||+||+|||+.+|.++..+++++.++|+|+|++|++++ +.+.++.|+.||++|.|.||||+
T Consensus 149 wN~P~~~~~~~~~~ALaaGN~VVlKps~~tp~t~~~l~~l~~~aGlP~gvv~vv~g-~~~~~~~L~~~~~v~~V~fTGS~ 227 (490)
T 3ju8_A 149 YNFPGHLPNGHIVPALLAGNCVVFKPSELTPKVAELTLKAWIQAGLPAGVLNLVQG-GRETGVALAAHRGLDGLFFTGSS 227 (490)
T ss_dssp SSSTTHHHHHHHHHHHHHTCEEEEECCTTCHHHHHHHHHHHHHTTCCTTTEEECCC-SHHHHHHHHTCTTCSEEEEESCH
T ss_pred CcchHHHHHHHHHHHHHcCCeEEEECCCCCcHHHHHHHHHHHHhCcCcCeEEEEeC-CHHHHHHHHhCCCcCEEEEECcH
Confidence 99999999999999999999999999999999999999999999999999999999 67899999999999999999999
Q ss_pred HHHHHHHHHHhhCCCCce-eeeCCCCCceeecCCCCHHHHHHHHHHHHhcccCCccccCcEEEEeCcc-HHHHHHHHHHH
Q 015031 161 DVGRQVMQAAATSNLKPV-SLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGI-YDEFEKKLVEK 238 (414)
Q Consensus 161 ~~~~~i~~~~~~~~~~~~-~~e~gG~~~~iV~~dadl~~a~~~i~~~~~~~~Gq~C~a~~~v~V~~~~-~~~f~~~l~~~ 238 (414)
.+|+.|.+.++ ++++|+ ++|+|||||+||++|||++.|++.+++++|.|+||.|++++++|||+++ +|+|+++|+++
T Consensus 228 ~~g~~i~~~aa-~~~~~v~~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~~i~d~f~~~l~~~ 306 (490)
T 3ju8_A 228 RTGNLLHSQFG-GQPQKILALEMGGNNPLVVEEVADLDAAVYTIIQSAFISAGQRCTCARRLLVPQGAWGDALLARLVAV 306 (490)
T ss_dssp HHHHHHHHHTT-TCTTSEEEEECCCCEEEEECCCSCHHHHHHHHHHHHHGGGGCSTTSEEEEEEESSHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhh-ccCCCcEEeecCCCCeEEECCCCCHHHHHHHHHHHHHhcCCCCCcCCCEEEEECCccHHHHHHHHHHH
Confidence 99999999987 788998 7999999999999999999999999999999999999999999999996 99999999999
Q ss_pred HhccccCC-CCCCCCCccccCCHHHHHHHHHHHHHhhhcCCeEeeCCcccCCCCceeeeEEEEeCCCCCcccccccccce
Q 015031 239 AKAWVVGD-PFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIGKKGYYIEPTIFTNVTEDMLIAKNEIFGPV 317 (414)
Q Consensus 239 ~~~~~~g~-~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPv 317 (414)
++++++|+ |.|+++++||+++..+++++++++++++++|+++++||...+.+|+|++|||+. ++++|++++||+||||
T Consensus 307 ~~~~~~G~~~~~~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~~~~gg~~~~~~g~~~~PTvl~-v~~~~~i~~eEiFGPV 385 (490)
T 3ju8_A 307 SATLRVGRFDEQPAPFMGAVISLSAAEHLLKAQEHLIGKGAQPLLAMTQPIDGAALLTPGILD-VSAVAERPDEEFFGPL 385 (490)
T ss_dssp HHHCCBCCTTCSSCCSBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCCCCSTTSCCCCCEEEE-CTTCSSCCCCCCCSSE
T ss_pred HHhccCCCCCCCCcCccccccCHHHHHHHHHHHHHHHHCCCEEEECCCccCCCCCEEccEEEE-eCCCCccccccccccE
Confidence 99999999 999999999999999999999999999999999999998765689999999998 9999999999999999
Q ss_pred EEEeeeCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHHhccceeEEEECCcCC-CCCCCCccCCCCCCCCCcchHHHHH
Q 015031 318 MALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSIRAGIIWINCYFA-FDSDCPYGGYKMSGFGRDCGLESLH 396 (414)
Q Consensus 318 l~v~~~~~~~eai~~~n~~~~gl~~sv~s~d~~~~~~~~~~l~~g~v~vN~~~~-~~~~~pfgG~~~sG~g~~~g~~~~~ 396 (414)
++|++|+|+||||+++|+++|||++||||+|.+.++++++++++|+|+||++.. ..+.+||||+|.||.+ +++
T Consensus 386 l~v~~~~~~~eAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~v~vN~~~~~~~~~~PfGG~~~SG~~------~~~ 459 (490)
T 3ju8_A 386 LQVIRYSDFAAAIREANATQYGLAAGLLSDSRERFEQFLVESRAGIVNWNKQLTGAASSAPFGGIGASGNH------RPS 459 (490)
T ss_dssp EEEEEESSHHHHHHHHHCSSCCSEEEEECSCHHHHHHHHHHCCSSEEEESSCSSCCCTTSEECCCGGGBSS------CCE
T ss_pred EEEEEeCCHHHHHHHHhcCCCCceEEEEcCCHHHHHHHHHhcCcceEEECCCcCCCCCCCCcCCccccchh------HHH
Confidence 999999999999999999999999999999999999999999999999999865 4578999999999974 589
Q ss_pred hhhcccEEEEeC
Q 015031 397 NYLQVKSVVTPI 408 (414)
Q Consensus 397 ~~~~~k~i~~~~ 408 (414)
+|++.|+|+++.
T Consensus 460 ~~~~~k~v~~~~ 471 (490)
T 3ju8_A 460 AYYAADYCAYPV 471 (490)
T ss_dssp ETTHHHHHEEEE
T ss_pred hhheeEEEEEec
Confidence 999999987754
|
| >4f9i_A Proline dehydrogenase/delta-1-pyrroline-5-carboxy dehydrogenase; proline utilization A, PUTA, flavoenzyme, structural genomic biology; HET: FAD MES; 2.20A {Geobacter sulfurreducens} | Back alignment and structure |
|---|
Probab=100.00 E-value=7.1e-85 Score=704.33 Aligned_cols=406 Identities=33% Similarity=0.529 Sum_probs=382.3
Q ss_pred CHHHHHHHHHhHHHHHHHHHHHcCCChHHHhhccHHHHHHHHHHHHHhhhhhcCceecc-ccCccccccccCCcEEEEEc
Q 015031 1 MLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKM-SRALQGYTLREPIGVVGHII 79 (414)
Q Consensus 1 L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~~~~~~~~~~~~-~~~~~~~~~~~P~Gvv~~i~ 79 (414)
|+++++.|++|+++|++++++|+|||..++ ..|+..+++.+++++.++++..+..... ..+..++..++|+|||++|+
T Consensus 596 L~~~Adll~~~~~eLa~~~~~E~GK~~~ea-~~Ev~~aid~lr~~a~~~~~~~~~~~~~~~~g~~~~~~~~PlGVV~~I~ 674 (1026)
T 4f9i_A 596 LLKAAQAARKRLFELSAWQVLEIGKQWDQA-YADVTEAIDFLEYYAREMIRLGQPQRVGHAPGELNHYFYEPKGVAAVIA 674 (1026)
T ss_dssp HHHHHHHHHHTHHHHHHHHHHHTCCCHHHH-HHHHHHHHHHHHHHHHHHHHHTSCEEECCCTTEEEEEEEEECSEEEEEC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCChhhH-HHHHHHHHHHHHHHHHHHHHhcCCccccCCCCccceeEeecCceEEEeC
Confidence 578999999999999999999999999975 5799999999999999988776543322 34567788999999999999
Q ss_pred CCCcChHhhHHHHHHHHhcCCeEEEecCCCChhHHHHHHHHHHHcCCCCCeEEEEcCCchhHHHHHHhCCCcCeEEEeCC
Q 015031 80 PWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGS 159 (414)
Q Consensus 80 p~n~P~~~~~~~~~~ALaaGN~vv~kps~~~~~~~~~l~~~~~~aglp~g~v~~~~~~~~~~~~~l~~~~~~~~v~~tGs 159 (414)
|||||+...++++++||++||+||+|||+.+|+++..+++++.++|+|+|++|+++|++.++++.|+.||+++.|.||||
T Consensus 675 PwNfPl~i~~~~~a~ALaaGNtVVlKPse~tplsa~~l~ell~eAGlP~gvvnvV~G~g~~vg~~L~~hp~v~~V~FTGS 754 (1026)
T 4f9i_A 675 PWNFPLAISMGMASAAIVTGNCVVFKPSGITSIIGWHLVELFREAGLPEGVFNFTPGRGSVMGDYLVDHPDISLIAFTGS 754 (1026)
T ss_dssp CSSSTTHHHHHHHHHHHHTTCEEEEECCGGGHHHHHHHHHHHHHTTCCTTSEEECCCCHHHHHHHHHHCTTEEEEEEESC
T ss_pred CCccHHHHHHHHHHHHHHcCCEEEEEcCccchHHHHHHHHHHHHhCcCCCeEEEEecCcHHHHHHHHhCCCCCEEEeCCC
Confidence 99999999999999999999999999999999999999999999999999999999988889999999999999999999
Q ss_pred HHHHHHHHHHHhh-----CCCCceeeeCCCCCceeecCCCCHHHHHHHHHHHHhcccCCccccCcEEEEeCccHHHHHHH
Q 015031 160 TDVGRQVMQAAAT-----SNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKK 234 (414)
Q Consensus 160 ~~~~~~i~~~~~~-----~~~~~~~~e~gG~~~~iV~~dadl~~a~~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f~~~ 234 (414)
+.+|+.|.+.++. ++++|+++|+|||||+||++|||++.|++.+++|+|.|+||.|++++++|||++++|+|+++
T Consensus 755 t~vg~~I~~~aa~~~~~~~~lkpv~lElGGknp~IV~~dADld~Aa~~iv~saf~~aGQ~C~A~~rl~V~~~i~d~f~~~ 834 (1026)
T 4f9i_A 755 METGLRIIERAAKVHPGQANVKKIISEMGGKNAIIIDDDADLDEAVPHVLYSAFGFQGQKCSACSRVIVLDAVYDKFIER 834 (1026)
T ss_dssp HHHHHHHHHHHTSCCTTCCSCCEEEEECCCCEEEEECTTCCHHHHHHHHHHHHHGGGGCSTTCEEEEEEEGGGHHHHHHH
T ss_pred HHHHHHHHHHhhcccccccCccceEEecCCCCeEEECCCCCHHHHHHHHHHHHHhCCCCCCCCCceEEecHHHHHHHHHH
Confidence 9999999998762 46799999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhccccCCCCCCCCCccccCCHHHHHHHHHHHHHhhhcCCeEeeCCcccCCCCceeeeEEEEeCCCCCcccccccc
Q 015031 235 LVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIGKKGYYIEPTIFTNVTEDMLIAKNEIF 314 (414)
Q Consensus 235 l~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~f 314 (414)
|+++++++++|+|.++++++||+++..+++++.++|++++++| ++++||..+...|+|++|||+.+++++|++++||+|
T Consensus 835 L~~~~~~l~vG~p~d~~t~~Gpvi~~~~~~~v~~~i~~a~~~G-~~v~gG~~~~~~G~fv~PTvl~~v~~~~~i~~eEiF 913 (1026)
T 4f9i_A 835 LVSMAKATKVGPSEDPANYMGAVADDKAMKSIKEYAEIGKREG-HVLYESPVPAGEGYFVPMTIIGGIKPEHRIAQEEIF 913 (1026)
T ss_dssp HHHHHHHCCBCCTTSTTCSBCCCSSHHHHHHHHHHHHHHHHHS-EEEEECCCCSSSSCCCCCEEEESCCTTSGGGTSCCC
T ss_pred HHHHHHhcccCCcccccCccccccCHHHHHHHHHHHHHHHhCC-eEEecCCcCCCCCceecceeeecCCCCccccCceec
Confidence 9999999999999999999999999999999999999999999 999999765545999999999999999999999999
Q ss_pred cceEEEeeeCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHHhccceeEEEECCcCC--CCCCCCccCCCCCCCCC-cch
Q 015031 315 GPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSIRAGIIWINCYFA--FDSDCPYGGYKMSGFGR-DCG 391 (414)
Q Consensus 315 gPvl~v~~~~~~~eai~~~n~~~~gl~~sv~s~d~~~~~~~~~~l~~g~v~vN~~~~--~~~~~pfgG~~~sG~g~-~~g 391 (414)
|||++|++|+|+||||+++|+++|||+++|||+|.+.++++++++++|+|+||+.++ ..+.+||||+|.||+|+ .+|
T Consensus 914 GPVl~V~~~~d~deAI~~aN~t~yGLt~~V~t~d~~~a~~~~~~l~aG~v~IN~~~~~~~~~~~PFGG~k~SG~G~~~gG 993 (1026)
T 4f9i_A 914 GPVLAVMRAKDFDQAIEWANSTQFALTGGIFSRSPEHLAKARREFRVGNLYINRNNTGALVERQPFGGARMSGVGTKAGG 993 (1026)
T ss_dssp SSEEEEEEESSHHHHHHHHTCSSCCSEEEEECCCHHHHHHHHHHSCCSEEEESSCSCCCCTTTSCBCCCGGGBSSCCBTS
T ss_pred CcEEEEEEeCCHHHHHHHHHcCCCCCeEEEECCCHHHHHHHHHhCCEeeEEEcCCCCCCCCCCCCCCCcCcCCCCCCcCC
Confidence 999999999999999999999999999999999999999999999999999999765 34789999999999994 689
Q ss_pred HHHHHhhhcccEEEEeC
Q 015031 392 LESLHNYLQVKSVVTPI 408 (414)
Q Consensus 392 ~~~~~~~~~~k~i~~~~ 408 (414)
++++++|+++|+|+.+.
T Consensus 994 ~~~l~~f~~~k~v~~~~ 1010 (1026)
T 4f9i_A 994 PDYLLHFMDPRVVTENT 1010 (1026)
T ss_dssp TTTGGGGEEEEEEEEEC
T ss_pred HHHHHHhceEEEEEEec
Confidence 99999999999998865
|
| >2y53_A Aldehyde dehydrogenase (BOX pathway); oxidoreductase, NADP, nucleotide-binding; HET: NAP; 1.40A {Burkholderia xenovorans LB400} PDB: 2y52_A 2y51_A 2vro_A* 2y5d_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.5e-83 Score=660.23 Aligned_cols=401 Identities=23% Similarity=0.327 Sum_probs=362.2
Q ss_pred CHHHHHHHHHhHHHHHHHHHHHcCCChHHHhhccHHHHHHHHHHHHHhhhhhcCc-------eeccc-cC-ccccccccC
Q 015031 1 MLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGE-------VLKMS-RA-LQGYTLREP 71 (414)
Q Consensus 1 L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~~~~~~~~-------~~~~~-~~-~~~~~~~~P 71 (414)
|+++++.|++|+++|++++++|+|||..++ ..|+..+++.+++++.+++++.+. ..+.. .+ ...+..++|
T Consensus 72 L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea-~~ev~~~~~~~~~~a~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~P 150 (534)
T 2y53_A 72 LADIVKLLQAKRGDYYAIATANSGTTRNDS-AVDIDGGIFTLSYYAKLGASLGEVHALRDGSAESLSKDRSFSAQHVLSP 150 (534)
T ss_dssp HHHHHHHHHHTHHHHHHHHHHHHCCCHHHH-HHHHHHHHHHHHHHHHHHHTTCSCSEEEEEEEEECSTTSSEEEEEEEEE
T ss_pred HHHHHHHHHHhHHHHHHHHHHHhCCCHHHH-HHHHHHHHHHHHHHHHHHHhccccccccCCccccCCCCCcccceEEEec
Confidence 578999999999999999999999999976 469999999999999887665432 11211 11 134678899
Q ss_pred C-cEEEEEcCCCcChHhhHHHHHHHHhcCCeEEEecCCCChhHHHHHHHHHHHcC-CCCCeEEEEcCCchhHHHHHHhCC
Q 015031 72 I-GVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAG-VPDGVLNVVPGFGPTAGAAIASHM 149 (414)
Q Consensus 72 ~-Gvv~~i~p~n~P~~~~~~~~~~ALaaGN~vv~kps~~~~~~~~~l~~~~~~ag-lp~g~v~~~~~~~~~~~~~l~~~~ 149 (414)
+ |||++|+|||||+...++++++||++||+||+|||+.+|+++..+++++.++| +|+|++|+++|++.+++.. .+
T Consensus 151 ~~GVv~~I~PwN~P~~~~~~~~a~ALaaGN~VVlKPs~~tp~~~~~l~~l~~~aG~lP~gvv~vv~g~~~~l~~~---l~ 227 (534)
T 2y53_A 151 TRGVALFINAFNFPSWGLWEKAAPALLSGVPVIVKPATATAWLTQRMVADVVDAGILPPGALSIICGSSAGLLDQ---IR 227 (534)
T ss_dssp CSSCEEEECCTTCTTHHHHHHHHHHHHTTCCEEEECCGGGHHHHHHHHHHHHHHTCSCTTSEEECCSCCTTSGGG---CC
T ss_pred CCCEEEEECCCchHHHHHHHHHHHHHHcCCEEEEECCCcchHHHHHHHHHHHHhCCCCCCeEEEEeCChHHHHhc---cc
Confidence 7 99999999999999999999999999999999999999999999999999999 7999999999865443222 25
Q ss_pred CcCeEEEeCCHHHHHHHHHHHh-hCCCCceeeeCCCCCceeecCCC-----CHHHHHHHHHHHHhcccCCccccCcEEEE
Q 015031 150 DIDKVSFTGSTDVGRQVMQAAA-TSNLKPVSLELGGKSPLLIFDDV-----DVNTAADMALLGILFNKGEICVASSRVYV 223 (414)
Q Consensus 150 ~~~~v~~tGs~~~~~~i~~~~~-~~~~~~~~~e~gG~~~~iV~~da-----dl~~a~~~i~~~~~~~~Gq~C~a~~~v~V 223 (414)
.+|.|.||||+.+|+.|.+.++ .++++|+++|+|||||+||++|| |++.|++.+++++|.|+||.|++++||||
T Consensus 228 ~vd~V~FTGS~~~G~~i~~~aa~a~~~k~v~lELGGk~p~iV~~dA~~~~~Dl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV 307 (534)
T 2y53_A 228 SFDVVSFTGSADTAATLRAHPAFVQRGARLNVQADSLNSAILCADATPDTPAFDLFIKEVVREMTVKSGQKCTAIRRAFV 307 (534)
T ss_dssp TTCEEEEESCHHHHHHHHTSHHHHTTCCEEEEECCCCEEEEECTTCCTTSHHHHHHHHHHHHHHHGGGGCCTTSEEEEEE
T ss_pred ccCEEEEECCHHHHHHHHHhhhhhcCCCcEEEEcCCCCeEEECCCccccccCHHHHHHHHHHHHHhCCCCcccCCCEEEE
Confidence 7999999999999999998753 37899999999999999999999 99999999999999999999999999999
Q ss_pred eCccHHHHHHHHHHHHhccccCCCCCCCCCccccCCHHHHHHHHHHHHHhhhcCCeEeeCCcccC------CCCceeeeE
Q 015031 224 QEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIG------KKGYYIEPT 297 (414)
Q Consensus 224 ~~~~~~~f~~~l~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~------~~g~~~~Pt 297 (414)
|++++|+|+++|+++++++++|+|.|+++++||++++.++++++++|+++ .+|+++++||.... ..|+|++||
T Consensus 308 ~~~i~d~f~~~l~~~~~~~~vG~p~~~~~~~Gpli~~~~~~rv~~~i~~a-~~ga~~~~GG~~~~~~~~~~~~g~~~~PT 386 (534)
T 2y53_A 308 PEAALEPVLEALKAKLAKITVGNPRNDAVRMGSLVSREQYENVLAGIAAL-REEAVLAYDSSAVPLIDADANIAACVAPH 386 (534)
T ss_dssp EGGGHHHHHHHHHHHHTTCCBBCTTSTTCSBCCCSCHHHHHHHHHHHHHH-HTSSEEEEECTTSCCBSCCTTTSCCCCCE
T ss_pred eccHHHHHHHHHHHHHHhccCCCCCcCCCCccCCCCHHHHHHHHHHHHHH-HcCCEEEECCcccccccccCCCCceecCE
Confidence 99999999999999999999999999999999999999999999999999 68999999997421 368999999
Q ss_pred EEEeCCCC--CcccccccccceEEEeeeC---CH-----HHHHHHHhcCCCCceEEEecCCHHHHHHHHhcc--ceeEEE
Q 015031 298 IFTNVTED--MLIAKNEIFGPVMALMKFK---TV-----EEAIKSANNTRYGLAAGIMTKDLNVANTVSRSI--RAGIIW 365 (414)
Q Consensus 298 vl~~~~~~--~~~~~~E~fgPvl~v~~~~---~~-----~eai~~~n~~~~gl~~sv~s~d~~~~~~~~~~l--~~g~v~ 365 (414)
|+.+++++ |++++||+||||++|++|+ |. ||||+++|+++|||++||||+|.+.++++++++ ++|+|+
T Consensus 387 vl~~v~~~~~~~i~~eEiFGPVl~v~~~~~~~~~~~~~~deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~~~aG~V~ 466 (534)
T 2y53_A 387 LFVVNDPDNATLLHDVEVFGPVASVAPYRVTTDTNALPEAHAVALARRGQGSLVASIYSNDDAHLGRLALELADSHGRVH 466 (534)
T ss_dssp EEECSCGGGCSSTTTCCCSSSEEEEEEECCCCC---CTTHHHHHHHHTTSSEEEEEEECSCHHHHHHHHHHHTTTEEEEE
T ss_pred EEEecCccccCHHHhCCCcCCEEEEEEECCCCCcccCCHHHHHHHHhCCCCCceEEEECCCHHHHHHHHHHHHhhCCEEE
Confidence 99999987 6899999999999999999 99 999999999999999999999999999999999 899999
Q ss_pred ECCcCC---------CCCCCCccCCCCCCCCCc-chHHHHHhhhcccEEEE
Q 015031 366 INCYFA---------FDSDCPYGGYKMSGFGRD-CGLESLHNYLQVKSVVT 406 (414)
Q Consensus 366 vN~~~~---------~~~~~pfgG~~~sG~g~~-~g~~~~~~~~~~k~i~~ 406 (414)
||++.. ..+.+||||+|.||+|++ +|.+++++|+++|++..
T Consensus 467 vN~~~~~~~~~~~~~~~~~~pfGG~k~SG~Gr~~~g~~~l~~~~~~k~v~~ 517 (534)
T 2y53_A 467 AISPSVQHSQTGHGNVMPMSLHGGPGRAGGGEELGGLRALAFYHRRSAIQA 517 (534)
T ss_dssp EECGGGTTTCCCSSCCCTTSEECCSGGGCSCCEESGGGGGGGGEEEEEEEE
T ss_pred EcCCcccccccccCCCCCCCCCCCcccCCCCCCcchHHHHHHHhhhheeec
Confidence 998642 357899999999999999 69999999999999876
|
| >3haz_A Proline dehydrogenase; proline utilization A, PUTA, flavoenzyme, 1-pyrroline-5-carboxylate dehydrogenase, oxidoreductase; HET: FAD NAD; 2.10A {Bradyrhizobium japonicum usda 110} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.1e-82 Score=682.34 Aligned_cols=401 Identities=29% Similarity=0.458 Sum_probs=374.7
Q ss_pred CHHHHHHHHHhHHHHHHHHHHHcCCChHHHhhccHHHHHHHHHHHHHhhhhhcCce--eccccCccccccccCCcEEEEE
Q 015031 1 MLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEV--LKMSRALQGYTLREPIGVVGHI 78 (414)
Q Consensus 1 L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~~~~~~~~~--~~~~~~~~~~~~~~P~Gvv~~i 78 (414)
|+++++.|++|+++|+++++.|+|||..++ ..|+..+++.+++++..+++..+.. .+...+...+++++|+|||++|
T Consensus 578 L~~~ad~l~~~~~eLa~~~~~E~GK~~~ea-~~Ev~~ai~~lr~~a~~a~~~~g~~~~~~~~~g~~~~~~~~P~GVV~~I 656 (1001)
T 3haz_A 578 LEQAAHLLESRSAHFIALLQREGGKTLDDA-LSELREAADFCRYYAAQGRKLFGSETAMPGPTGESNALTMRGRGVFVAI 656 (1001)
T ss_dssp HHHHHHHHHHTHHHHHHHHHHTTCCCHHHH-HHHHHHHHHHHHHHHHHHHHHHSSCEECCCCTTEEEEEEEEECSEEEEE
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCChhHH-HHHHHHHHHHHHHHHHHHHhhcCccccccCCCCCceEEEEeCCcEEEEE
Confidence 578999999999999999999999999975 6799999999999999988766543 3334566788999999999999
Q ss_pred cCCCcChHhhHHHHHHHHhcCCeEEEecCCCChhHHHHHHHHHHHcCCCCCeEEEEcCCchhHHHHHHhCCCcCeEEEeC
Q 015031 79 IPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTG 158 (414)
Q Consensus 79 ~p~n~P~~~~~~~~~~ALaaGN~vv~kps~~~~~~~~~l~~~~~~aglp~g~v~~~~~~~~~~~~~l~~~~~~~~v~~tG 158 (414)
+|||||+...++++++||++||+||+|||+.+|.++..+++++.++|+|+|++|+++|++.+ +..|+.||++|.|+|||
T Consensus 657 ~PwNfPl~i~~~~va~ALAAGNtVVlKPse~tp~ta~~l~ell~eAGlP~gvv~vV~G~g~~-g~~L~~~p~Vd~V~FTG 735 (1001)
T 3haz_A 657 SPWNFPLAIFLGQVTAALMAGNSVVAKPAEQTPRIAREAVALLHEAGIPKSALYLVTGDGRI-GAALTAHPDIAGVVFTG 735 (1001)
T ss_dssp CCSSSTTHHHHHHHHHHHHTTCEEEEECCTTCHHHHHHHHHHHHHHTCCTTTEEECCCCHHH-HHHHHHCTTCCEEEEES
T ss_pred cCCCChHHHHHHHHHHHHHcCCEEEEecchhhHHHHHHHHHHHHHhCcCcCcEEEEecCchH-HHHHHhCCCcCEEEecC
Confidence 99999999999999999999999999999999999999999999999999999999998777 99999999999999999
Q ss_pred CHHHHHHHHHHHhhC--CCCceeeeCCCCCceeecCCCCHHHHHHHHHHHHhcccCCccccCcEEEEeCccHHHHHHHHH
Q 015031 159 STDVGRQVMQAAATS--NLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLV 236 (414)
Q Consensus 159 s~~~~~~i~~~~~~~--~~~~~~~e~gG~~~~iV~~dadl~~a~~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f~~~l~ 236 (414)
|+.+|+.|.+.++.+ +.+|+++|+|||||+||++|||++.|++.+++++|.|+||.|+++++||||++++|+|+++|+
T Consensus 736 St~vGr~I~~~aA~~~~~l~pv~lElGGknp~IV~~dADld~Aa~~iv~s~f~naGQ~C~A~~rllV~e~i~d~f~~~L~ 815 (1001)
T 3haz_A 736 STEVARSINRALAAKDGPIVPLIAETGGINAMIADATALPEQVADDVVTSAFRSAGQRCSALRLLFVQEDVADRMIEMVA 815 (1001)
T ss_dssp CHHHHHHHHHHHHHSSSCCCCEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCSTTCEEEEEEEHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHhcccCCCceEEeecCCcceEEEcCCCCHHHHHHHHHHHHHhCCCCCCCCCceeeccHHHHHHHHHHHH
Confidence 999999999988743 479999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhccccCCCCCCCCCccccCCHHHHHHHHHHHHHhhhcCCeEeeCCcccCCCCceeeeEEEEeCCCCCcccccccccc
Q 015031 237 EKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIGKKGYYIEPTIFTNVTEDMLIAKNEIFGP 316 (414)
Q Consensus 237 ~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgP 316 (414)
++++++++|+|.++++++||+++..+++++.++|++++++| ++ +||..+. .|+|+.|||+.+ +++.+++||+|||
T Consensus 816 ~~~~~l~vGdp~d~~t~~Gpli~~~~~~rv~~~i~~a~~~g-~v-~gg~~~~-~G~fv~PTvl~~--~~~~~~~eEiFGP 890 (1001)
T 3haz_A 816 GAARELKIGDPSDVATHVGPVIDVEAKQRLDAHIARMKTEA-RL-HFAGPAP-EGCFVAPHIFEL--TEAGQLTEEVFGP 890 (1001)
T ss_dssp HHHHTCCBSCTTSTTCSBCCCSCHHHHHHHHHHHHHHHHHS-EE-EEECCCC-SSSCCCCEEEEC--SSGGGCCSCCCSS
T ss_pred HHHHhcCCCCcccccCccCCCCCHHHHHHHHHHHHHHHhcC-eE-eccccCC-CCcEEeeEEecC--CCHHHHhccccCc
Confidence 99999999999999999999999999999999999999888 88 8887653 699999999974 6788999999999
Q ss_pred eEEEeeeCC--HHHHHHHHhcCCCCceEEEecCCHHHHHHHHhccceeEEEECCcCCC--CCCCCccCCCCCCCC-Ccch
Q 015031 317 VMALMKFKT--VEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSIRAGIIWINCYFAF--DSDCPYGGYKMSGFG-RDCG 391 (414)
Q Consensus 317 vl~v~~~~~--~~eai~~~n~~~~gl~~sv~s~d~~~~~~~~~~l~~g~v~vN~~~~~--~~~~pfgG~~~sG~g-~~~g 391 (414)
|++|++|++ +||||+++|+++|||+++|||+|.+.++++++++++|+|+||+.... .+.+||||+|.||+| +.+|
T Consensus 891 VL~V~~~~~~~ldeAI~~aN~t~yGLta~V~T~d~~~a~~~a~~l~aG~V~VN~~~~~~~~~~~PFGG~k~SG~G~~~gG 970 (1001)
T 3haz_A 891 ILHVVRYRPENLERVLRAIERTGYGLTLGVHSRIDDSIEAIIDRVQVGNIYVNRNMIGAVVGVQPFGGNGLSGTGPKAGG 970 (1001)
T ss_dssp EEEEEEECGGGHHHHHHHHHHTCCCSEEEEECSCHHHHHHHHHHCCCSEEEESSCSCCCCTTTSCBCCCGGGBCCCCBTS
T ss_pred EEEEEEeCCCCHHHHHHHHHcCCCCceEEEEcCCHHHHHHHHHhCCeeeEEEeCCCcCCCCCCCCCCCcccCcCCCCCCC
Confidence 999999996 89999999999999999999999999999999999999999998653 357899999999999 5789
Q ss_pred HHHHHhhhcccEEEEeC
Q 015031 392 LESLHNYLQVKSVVTPI 408 (414)
Q Consensus 392 ~~~~~~~~~~k~i~~~~ 408 (414)
++++++|++.|+|+++.
T Consensus 971 ~~gl~~ft~~K~v~~~~ 987 (1001)
T 3haz_A 971 PHYLARFATEQTVTINT 987 (1001)
T ss_dssp TTSGGGGEEEEEEEEEC
T ss_pred HHHHHHhceeeEEEECC
Confidence 99999999999998875
|
| >3v4c_A Aldehyde dehydrogenase (NADP+); structural genomics, PSI-biology, nysgrc, NEW YORK structura genomics research consortium; HET: PE4; 1.91A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=100.00 E-value=9.2e-80 Score=631.39 Aligned_cols=390 Identities=23% Similarity=0.300 Sum_probs=353.5
Q ss_pred CHHHHHHHHHhHHHHHHHHHHHcCCChHHHhhccHHHHHHHHHHHHHhhhhh--cCceec----c---ccCccccccccC
Q 015031 1 MLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKI--HGEVLK----M---SRALQGYTLREP 71 (414)
Q Consensus 1 L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~~~~~--~~~~~~----~---~~~~~~~~~~~P 71 (414)
|+++++.|++|+++|++++++|+|||..++ ..|+..+++.+++++..+++. ...... . ..+...+.+++|
T Consensus 91 L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a-~~ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P 169 (528)
T 3v4c_A 91 LRAIADEIEARAEAITEIGSQETGLPEARL-NGERGRTTGQLRLFADHIEKGDYLDRRVDAAMPERQPAPRQEIRLVQRP 169 (528)
T ss_dssp HHHHHHHHHHTHHHHHHHHHHHHCCCHHHH-HHHHHHHHHHHHHHHHHHHHCGGGCCEEECCBTTCSSSCBCCEEEEEEE
T ss_pred HHHHHHHHHHhHHHHHHHHHHHhCCCHHHH-HHHHHHHHHHHHHHHHHHhhccccccccccccccccCCCCCcceeEeeC
Confidence 578999999999999999999999999875 579999999999999988762 222221 0 023456789999
Q ss_pred CcEEEEEcCCCcChHhhH--HHHHHHHhcCCeEEEecCCCChhHHHHHHHHH----HHcCCCCCeEEEEcCCchhHHHHH
Q 015031 72 IGVVGHIIPWNFPTTMFF--MKVSPALAAGCTMIVKPAEQTPLIALYFAHLA----KLAGVPDGVLNVVPGFGPTAGAAI 145 (414)
Q Consensus 72 ~Gvv~~i~p~n~P~~~~~--~~~~~ALaaGN~vv~kps~~~~~~~~~l~~~~----~~aglp~g~v~~~~~~~~~~~~~l 145 (414)
+|||++|+|||||+...+ +++++||++||+||+|||+.+|.++..+++++ .++|+|+|++|++++++.++++.|
T Consensus 170 ~GVv~~I~PwN~P~~~~~~~~~~a~ALaaGN~VVlKps~~tp~t~~~l~~l~~~~l~~aGlP~gvv~vv~g~~~~~g~~L 249 (528)
T 3v4c_A 170 VGPVAVFGASNFPLAFSTAGGDTAAALAAGCPVVVKGHSAHPGTGEIVAEAVDAAIRKTGVHPGVFSLIQGGSRDVGHAL 249 (528)
T ss_dssp CSCEEEECCSSSTTTTSTTSHHHHHHHHHTCCEEEECCTTCHHHHHHHHHHHHHHHHHHTCCGGGEEEECCCCHHHHHHH
T ss_pred CcEEEEECCCcchHHHhhhhhhhHHHHhcCCEEEEECCCCCcHHHHHHHHHHHHHHHhcCCCcCeEEEEeCCCHHHHHHH
Confidence 999999999999999865 89999999999999999999999999998875 568999999999999888899999
Q ss_pred HhCCCcCeEEEeCCHHHHHHHHHHHhhCCC--CceeeeCCCCCceeecCCC---CHHHHHHHHHHHHhcccCCccccCcE
Q 015031 146 ASHMDIDKVSFTGSTDVGRQVMQAAATSNL--KPVSLELGGKSPLLIFDDV---DVNTAADMALLGILFNKGEICVASSR 220 (414)
Q Consensus 146 ~~~~~~~~v~~tGs~~~~~~i~~~~~~~~~--~~~~~e~gG~~~~iV~~da---dl~~a~~~i~~~~~~~~Gq~C~a~~~ 220 (414)
+.||++|.|.||||+.+|+.|.+.++ +++ +|+++|+|||||+||++|| |++.|++.+++++|.|+||.|++++|
T Consensus 250 ~~~p~v~~V~fTGS~~~G~~i~~~aa-~~~~~~pv~lElGGk~p~iV~~dAd~~dl~~Aa~~i~~~~~~n~GQ~C~a~~r 328 (528)
T 3v4c_A 250 VQHPHIKAVGFTGSLAGGRALFDLCA-ARPEPIPFFGELGSVNPMFLLPEALKARAETLGQGWAGSLTMGAGQFCTNPGI 328 (528)
T ss_dssp HHCTTCCEEEEESCHHHHHHHHHHHH-HSSSCCCEEEECCCCCCEEECHHHHHHHHHHHHHHHHHHHHGGGGCCTTCCCE
T ss_pred HhCCCCCEEEEECChHHHHHHHHHHh-hccCCCceEEecCCCCeEEECCCCChhhHHHHHHHHHHHHHhcCCCccccCcE
Confidence 99999999999999999999999987 777 8999999999999999999 88999999999999999999999999
Q ss_pred EEEeCc-cHHHHHHHHHHHHhccccCCCCCCCCCccccCCHHHHHHHHHHHHHhhhcCCeEeeCCcccCCCCceeeeEEE
Q 015031 221 VYVQEG-IYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIGKKGYYIEPTIF 299 (414)
Q Consensus 221 v~V~~~-~~~~f~~~l~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~~~g~~~~Ptvl 299 (414)
||||++ ++|+|+++|++++++++. ++.+||+++..+.++++++++ ++|+++++||.. .|+|++|||+
T Consensus 329 vlV~~~~i~d~f~~~l~~~~~~~~~------~~~~gp~~~~~~~~~v~~~~~---~~Ga~v~~gG~~---~g~~~~PTvl 396 (528)
T 3v4c_A 329 AVVIEGADADRFTTAAVEALAKVAP------QTMLTDGIAKAYRDGQARFAT---RNAVKPLLATES---SGRDASPNLF 396 (528)
T ss_dssp EEEESSHHHHHHHHHHHHHHHTCCC------EECSCHHHHHHHHHHHHHHHT---CTTCEEEECCCC---CTTEECCEEE
T ss_pred EEEecccHHHHHHHHHHHHHHhccc------CCCCCHHHHHHHHHHHHHHHH---hCCCEEEeCCCc---CCceeccEEE
Confidence 999997 999999999999999864 357899998888888877763 478999999975 7999999999
Q ss_pred EeCCCC---CcccccccccceEEEeeeCCHHHHHHHHhcCCCCceEEEecC--CHHHHHHHHhccc--eeEEEECCcCC-
Q 015031 300 TNVTED---MLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTK--DLNVANTVSRSIR--AGIIWINCYFA- 371 (414)
Q Consensus 300 ~~~~~~---~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~sv~s~--d~~~~~~~~~~l~--~g~v~vN~~~~- 371 (414)
.+++++ |++++||+||||++|++|+|+||||+++|+++|||+++|||+ |.+.+++++++++ +|+|+||++++
T Consensus 397 ~~~~~~~~~~~i~~eEiFGPVl~V~~~~~~deAi~~aN~~~~GL~a~v~t~d~d~~~a~~~a~~l~~~aG~V~vN~~~~~ 476 (528)
T 3v4c_A 397 ETTGAQFLADHALGEEVFGPLGLVVRVGSPAEMEELARGFQGQLTATIHMDAGDLETARRLRPVLERKAGRVLVNGFPTG 476 (528)
T ss_dssp EEEHHHHHHCGGGGCCCSSSEEEEEEESSHHHHHHHHHHCCCEEEEEEECCGGGHHHHHHHHHHHHHHEEEEEESSCTTC
T ss_pred EecCcccccChhhcccccCCeEEEEecCCHHHHHHHHhcCCCCceEEEEcCCCCHHHHHHHHHHHhhcCcEEEEcCCCCC
Confidence 988887 899999999999999999999999999999999999999999 8899999999998 99999999765
Q ss_pred --CCCCCCccC-CCCCCCCCcc--hHHHHHhhhcccEE
Q 015031 372 --FDSDCPYGG-YKMSGFGRDC--GLESLHNYLQVKSV 404 (414)
Q Consensus 372 --~~~~~pfgG-~~~sG~g~~~--g~~~~~~~~~~k~i 404 (414)
..+.+|||| +|.||+|+++ |++|+++|+++|++
T Consensus 477 ~~~~~~~pfGG~~~~Sg~gr~~~~G~~gl~~~~~~k~~ 514 (528)
T 3v4c_A 477 VEVVDSMVHGGPYPASTNFGATSVGTMSIRRFLRPVAY 514 (528)
T ss_dssp CCCSTTCCCCCTTTTBSCTTCCSSSGGGGGGGEEEEEE
T ss_pred CccCCCCCCCCCCCCCCCCCCCCCcHHHHHHhchhHHh
Confidence 357899999 9999999976 99999999999875
|
| >1ez0_A ALDH, aldehyde dehydrogenase; nucleotide binding domain, NADP+, oxidoreductase; HET: NAP; 2.10A {Vibrio harveyi} SCOP: c.82.1.1 PDB: 1eyy_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.2e-79 Score=626.19 Aligned_cols=389 Identities=21% Similarity=0.281 Sum_probs=351.6
Q ss_pred CHHHHHHHHHhHHHHHHHHHHHcCCChHHHhhccHHHHHHHHHHHHHhhhh--hcCceec----c--ccC-ccccccccC
Q 015031 1 MLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADK--IHGEVLK----M--SRA-LQGYTLREP 71 (414)
Q Consensus 1 L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~~~~--~~~~~~~----~--~~~-~~~~~~~~P 71 (414)
|+++++.|++|+++|++++++|+|||..++ ..|+..+++.++++++.+++ ..+..+. . +.+ ...+.+++|
T Consensus 58 L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a-~~Ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P 136 (510)
T 1ez0_A 58 LRTIASELEARSDDIIARAHLETALPEVRL-TGEIARTANQLRLFADVVNSGSYHQAILDTPNPTRAPLPKPDIRRQQIA 136 (510)
T ss_dssp HHHHHHHHHHTHHHHHHHHHHHHCCCHHHH-HHHHHHHHHHHHHHHHHHHHTGGGCEEEECCBTTCSSSCBCCEEEEEEE
T ss_pred HHHHHHHHHHhHHHHHHHHHHHhCCCHHHH-HHHHHHHHHHHHHHHHHHHhCccccccccccccccCCCCCCCceEEEec
Confidence 578999999999999999999999999864 67999999999999988865 3333221 1 111 135789999
Q ss_pred CcEEEEEcCCCcChHhh--HHHHHHHHhcCCeEEEecCCCChhHHHHHHHHH----HHcCCCCCeEEEEcCCchhHHHHH
Q 015031 72 IGVVGHIIPWNFPTTMF--FMKVSPALAAGCTMIVKPAEQTPLIALYFAHLA----KLAGVPDGVLNVVPGFGPTAGAAI 145 (414)
Q Consensus 72 ~Gvv~~i~p~n~P~~~~--~~~~~~ALaaGN~vv~kps~~~~~~~~~l~~~~----~~aglp~g~v~~~~~~~~~~~~~l 145 (414)
+|||++|+|||||+... .+++++||++||+||+|||+.+|+++..+++++ .++|+|+|++|+++|++.++++.|
T Consensus 137 ~GVv~~I~PwN~P~~~~~~~~~~~~ALaaGN~VVlKps~~tp~t~~~l~~l~~~al~~aGlP~gvv~vv~g~~~~~g~~L 216 (510)
T 1ez0_A 137 LGPVAVFGASNFPLAFSAAGGDTASALAAGCPVIVKGHTAHPGTSQIVAECIEQALKQEQLPQAIFTLLQGNQRALGQAL 216 (510)
T ss_dssp CSCEEEECCSSCTTTTSTTSHHHHHHHHHTCCEEEECCTTCHHHHHHHHHHHHHHHHHHTCCGGGEEEECCSCTHHHHHH
T ss_pred CcEEEEECCccchhhhhhhHHHHHHHHHcCCEEEEECCCCchHHHHHHHHHHHHHHHHhCCCCCeEEEEeCCcHHHHHHH
Confidence 99999999999999985 499999999999999999999999999999998 567999999999999777899999
Q ss_pred HhCCCcCeEEEeCCHHHHHHHHHHHhhCCC--CceeeeCCCCCceeecCCCCHH--HHHHHHHHHHhcccCCccccCcEE
Q 015031 146 ASHMDIDKVSFTGSTDVGRQVMQAAATSNL--KPVSLELGGKSPLLIFDDVDVN--TAADMALLGILFNKGEICVASSRV 221 (414)
Q Consensus 146 ~~~~~~~~v~~tGs~~~~~~i~~~~~~~~~--~~~~~e~gG~~~~iV~~dadl~--~a~~~i~~~~~~~~Gq~C~a~~~v 221 (414)
+.||++|.|.||||+.+|+.|.+.++ +++ +|+++|+|||||+||++|||++ .|++.+++++|.|+||.|++++||
T Consensus 217 ~~~p~v~~I~FTGS~~~G~~i~~~aa-~~l~~~pv~lELGGk~p~iV~~dADl~~~~aa~~i~~~~~~n~GQ~C~a~~rv 295 (510)
T 1ez0_A 217 VSHPEIKAVGFTGSVGGGRALFNLAH-ERPEPIPFYGELGAINPTFIFPSAMRAKADLADQFVASMTMGCGQFCTKPGVV 295 (510)
T ss_dssp HHCTTCCEEEEESCHHHHHHHHHHHH-HSSSCCCEEEECCCCCEEEECHHHHHHCTTHHHHHHHHHTGGGGCCTTCCCEE
T ss_pred HcCCCCCEEEEeCcHHHHHHHHHHhh-ccCCCccEEEECCCCCeEEEeCCCCccHHHHHHHHHHHHHcCCCCCcCCCCEE
Confidence 99999999999999999999999887 564 9999999999999999999999 999999999999999999999999
Q ss_pred EEeCc-cHHHHHHHHHHHHhccccCCCCCCCCCccccCCHHHHHHHHHHHHHhhh-cCCeEeeCCcccCCCCceeeeEEE
Q 015031 222 YVQEG-IYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKR-EGATLLTGGKPIGKKGYYIEPTIF 299 (414)
Q Consensus 222 ~V~~~-~~~~f~~~l~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~-~ga~v~~gg~~~~~~g~~~~Ptvl 299 (414)
|||++ ++|+|+++|+++++++++ ||++++.+.+++.++++++++ +|+++++||. .|+|++|||+
T Consensus 296 lV~~~~i~d~f~~~l~~~~~~~~~----------gp~~~~~~~~~~~~~v~~~~~~~Ga~~~~gg~----~g~~~~Ptvl 361 (510)
T 1ez0_A 296 FALNTPETQAFIETAQSLIRQQSP----------STLLTPGIRDSYQSQVVSRGSDDGIDVTFSQA----ESPCVASALF 361 (510)
T ss_dssp EEESSHHHHHHHHHHHHHHHHCCC----------BCCSSHHHHHHHHHHHHHHHTSTTEEEEECCC----CTTSBCCEEE
T ss_pred EEeCCccHHHHHHHHHHHHHhcCC----------CCCCCHHHHHHHHHHHHHHHhcCCCEEEecCC----CCCEecCEEE
Confidence 99999 999999999999998864 678888899999999999884 7999999997 2899999999
Q ss_pred EeCCCC---CcccccccccceEEEeeeCCHHHHHHHHhcCCCCceEEEecCCH--HHHHHHHhcc--ceeEEEECCcCC-
Q 015031 300 TNVTED---MLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDL--NVANTVSRSI--RAGIIWINCYFA- 371 (414)
Q Consensus 300 ~~~~~~---~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~sv~s~d~--~~~~~~~~~l--~~g~v~vN~~~~- 371 (414)
.+++++ |++++||+||||++|++|+|+||||+++|+++|||++||||+|. +.++++++++ ++|+|+||++..
T Consensus 362 ~~~~~~~~~~~i~~eEiFGPVl~v~~~~~~deai~~aN~~~~gLaa~v~t~d~~~~~a~~~~~~l~~~aG~V~iN~~~~~ 441 (510)
T 1ez0_A 362 VTSSENWRKHPAWEEEIFGPQSLIVVCENVADMLSLSEMLAGSLTATIHATEEDYPQVSQLIPRLEEIAGRLVFNGWPTG 441 (510)
T ss_dssp EEEHHHHHHCGGGGSCCCSSEEEEEEESSHHHHHHHHHTCCCEEEEEEECCGGGHHHHHHHHHHHHTTEEEEEESSCSSC
T ss_pred EecCCccccCHHHcCCccCCeEEEEEeCCHHHHHHHHhcCCCCeEEEEEccCcCHHHHHHHHHHHhhcccEEEECCCCcc
Confidence 988777 99999999999999999999999999999999999999999987 7899999999 799999999764
Q ss_pred --CCCCCCccC-CCCCCCCC--cchHHHHHhhhcccEEE
Q 015031 372 --FDSDCPYGG-YKMSGFGR--DCGLESLHNYLQVKSVV 405 (414)
Q Consensus 372 --~~~~~pfgG-~~~sG~g~--~~g~~~~~~~~~~k~i~ 405 (414)
..+.+|||| +|.||.|+ .+|.+|+++|+++|++.
T Consensus 442 ~~~~~~~pfGG~~~~sG~g~~~~~G~~gl~~~~~~k~~~ 480 (510)
T 1ez0_A 442 VEVGYAMVHGGPYPASTHSASTSVGAEAIHRWLRPVAYQ 480 (510)
T ss_dssp CCCSSSCCCCCSTTSCSCSSCCSSSGGGGGGGEEEEEEE
T ss_pred CccCCCCCCCCCCCCcCCCCCCCccHHHHHHhheEEEEc
Confidence 457899999 78899875 37999999999998764
|
| >3k9d_A LMO1179 protein, aldehyde dehydrogenase; structural genomics, PSI-2, protein initiative; 2.00A {Listeria monocytogenes} | Back alignment and structure |
|---|
Probab=100.00 E-value=4.7e-75 Score=588.05 Aligned_cols=384 Identities=19% Similarity=0.214 Sum_probs=336.7
Q ss_pred CHHHHHHHHHhHHHHHHHHHHHcCCChHHHhhccHHHHHHHHHHHHHhhhhhcC-ceeccccCccccccccCCcEEEEEc
Q 015031 1 MLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHG-EVLKMSRALQGYTLREPIGVVGHII 79 (414)
Q Consensus 1 L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~~~~~~~-~~~~~~~~~~~~~~~~P~Gvv~~i~ 79 (414)
|+++++.|++|+++|++++++|+||+..++...+...+++.+ ..+++.... ..+..+.+...+.+++|+|||++|+
T Consensus 40 L~~~a~~l~~~~~ela~~~~~e~Gk~~~e~~~~~~~~~~~~~---~~~~~~~~~~g~~~~~~~~~~~~~~~P~GVv~~I~ 116 (464)
T 3k9d_A 40 VKAIADAGYGAREKLAKMAHEETGFGIWQDKVIKNVFASKHV---YNYIKDMKTIGMLKEDNEKKVMEVAVPLGVVAGLI 116 (464)
T ss_dssp HHHHHHHHHHTHHHHHHHHHHHHCCSCHHHHHHHHHHHHHHH---HHHHTTCCCSEEEEEETTTTEEEEEEECCEEEEEE
T ss_pred HHHHHHHHHHhHHHHHHHHHHHhCcCHHHHHHHHHHHHHHHH---HHhhhcccccceeccCCCceeEEEEecceEEEEEC
Confidence 578999999999999999999999999875433444444433 333332211 1222234567788999999999999
Q ss_pred CCCcChHhhHHHHHHHHhcCCeEEEecCCCChhHHHHHH----HHHHHcCCCCCeEEEEcCCchhHHHHHHhCCCcCeEE
Q 015031 80 PWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFA----HLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVS 155 (414)
Q Consensus 80 p~n~P~~~~~~~~~~ALaaGN~vv~kps~~~~~~~~~l~----~~~~~aglp~g~v~~~~~~~~~~~~~l~~~~~~~~v~ 155 (414)
|||||+...++++++||++||+||+|||+.+|.++..++ +++.++|+|+|++|++++++.+.++.|+.||++|.|+
T Consensus 117 P~N~P~~~~~~~~~~ALaaGN~VVlKps~~ap~t~~~l~~ll~~~~~~aG~P~gvv~vv~g~~~~~~~~L~~~~~vd~I~ 196 (464)
T 3k9d_A 117 PSTNPTSTVIYKTLISIKAGNSIVFSPHPNALKAILETVRIISEAAEKAGCPKGAISCMTVPTIQGTDQLMKHKDTAVIL 196 (464)
T ss_dssp CSSSHHHHHHHHHHHHHHTTCEEEEEECGGGHHHHHHHHHHHHHHHHHTTCCTTSEEECSSCCHHHHHHHHHCTTEEEEE
T ss_pred CCcChHHHHHHHHHHHHHhCCeEEEECCcchHHHHHHHHHHHHHHHHHhCCCCCeEEEEeCCCHHHHHHHHhCCCCCEEE
Confidence 999999999999999999999999999999999998755 5568999999999999998888999999999999999
Q ss_pred EeCCHHHHHHHHHHHhhCCCCceeeeCC-CCCceeecCCCCHHHHHHHHHHHHhcccCCccccCcEEEEeCccHHHHHHH
Q 015031 156 FTGSTDVGRQVMQAAATSNLKPVSLELG-GKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKK 234 (414)
Q Consensus 156 ~tGs~~~~~~i~~~~~~~~~~~~~~e~g-G~~~~iV~~dadl~~a~~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f~~~ 234 (414)
||||+.. .+.++ ++++|+ +|+| ||+|+||++|||++.|++.+++++|+|+||.|+++++||||+++||+|+++
T Consensus 197 fTGs~~v----~~~a~-~~~kpv-lelG~G~~p~iV~~dADl~~Aa~~i~~~~~~n~Gq~C~a~~rvlV~~~i~d~f~~~ 270 (464)
T 3k9d_A 197 ATGGSAM----VKAAY-SSGTPA-IGVGPGNGPAFIERSANIPRAVKHILDSKTFDNGTICASEQSVVVERVNKEAVIAE 270 (464)
T ss_dssp ECSCHHH----HHHHT-TSSSCE-EEBCCCCCEEEECTTSCHHHHHHHHHHHHTGGGGCSTTSCCEEEEEHHHHHHHHHH
T ss_pred EeCChHH----HHHHH-hcCCcE-EeeCCCCCeEEECCCCCHHHHHHHHHHHHhcCCCCCCCCCcEEEEeHHHHHHHHHH
Confidence 9999984 34444 788999 7777 999999999999999999999999999999999999999999999999999
Q ss_pred HHHHH-------hccccCCCC-CCCCCccccCCHHHHHHHHHHHHHhhhcCCeEeeCCcccCCCCceeeeEEEEeCCCCC
Q 015031 235 LVEKA-------KAWVVGDPF-DPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIGKKGYYIEPTIFTNVTEDM 306 (414)
Q Consensus 235 l~~~~-------~~~~~g~~~-~~~~~~gpl~~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~ 306 (414)
|+++. +.+++|+|. ++++++||+++.++++++.++++.++.+|+++++||.. ++++++
T Consensus 271 l~~~~~~~~~~~~~~~~g~~~~~~~~~~gp~i~~~~~~~i~~~~~~a~~~ga~vl~gg~~--------------~v~~~~ 336 (464)
T 3k9d_A 271 FRKQGAHFLSDAEAVQLGKFILRPNGSMNPAIVGKSVQHIANLAGLTVPADARVLIAEET--------------KVGAKI 336 (464)
T ss_dssp HHHTTEEECCHHHHHHHHHHHBCTTSCBCGGGTTCCHHHHHHHTTCCCCTTCCEEEEECC--------------CCSTTC
T ss_pred HHHhhhhhcChhhhhhhcccccCCCCccCcccCHHHHHHHHHHhhhhhcCCCEEEEcCCC--------------CCCCCC
Confidence 99986 456788887 77899999999999999999999999999999999863 456777
Q ss_pred cccccccccceEEEeeeCCHHHHH----HHHhcCCCCceEEEecCCHHHHHHHHhccceeEEEECCcCC---------CC
Q 015031 307 LIAKNEIFGPVMALMKFKTVEEAI----KSANNTRYGLAAGIMTKDLNVANTVSRSIRAGIIWINCYFA---------FD 373 (414)
Q Consensus 307 ~~~~~E~fgPvl~v~~~~~~~eai----~~~n~~~~gl~~sv~s~d~~~~~~~~~~l~~g~v~vN~~~~---------~~ 373 (414)
++. +|+||||++|++|+|+|||| +++|+++|||+++|||+|.+.++++++++++|+|+||++.. ..
T Consensus 337 ~~~-~E~fgPVl~v~~~~~~~eAi~~ai~~~n~~~~gl~a~i~t~d~~~a~~~~~~l~~G~v~vN~~~~~~~~g~~~~~~ 415 (464)
T 3k9d_A 337 PYS-REKLAPILAFYTAETWQEACELSMDILYHEGAGHTLIIHSEDKEIIREFALKKPVSRLLVNTPGALGGIGATTNLV 415 (464)
T ss_dssp GGG-SCCCSSEEEEEEESSHHHHHHHHHHHHHHTTTEEEEEEECSCHHHHHHHHHHSSEEEEEESSCHHHHHTTSSSSSC
T ss_pred ccc-ccccCceEEEEEeCCHHHHHHHHHHHHhcCCCCCeEEEEeCCHHHHHHHHHhCCEeEEEEECCccccccccCCCCC
Confidence 765 89999999999999999997 79999999999999999999999999999999999999864 46
Q ss_pred CCCCccCCCCCCCCCcchHHHHHhhhcccEEEEeCC
Q 015031 374 SDCPYGGYKMSGFGRDCGLESLHNYLQVKSVVTPIF 409 (414)
Q Consensus 374 ~~~pfgG~~~sG~g~~~g~~~~~~~~~~k~i~~~~~ 409 (414)
+.+|||| +.+|.|.++|..|+++|++.|+|.+..+
T Consensus 416 ~~~~~G~-G~~G~g~~~~~~~~~~~~~~k~v~~~~~ 450 (464)
T 3k9d_A 416 PALTLGC-GAVGGSSSSDNIGPENLFNIRRIATGVL 450 (464)
T ss_dssp CCSCBBC-TGGGTCSCCSBCCGGGSEEEEEEEECCC
T ss_pred ccccccC-cCCCCCcCCCCCCHHHheEEEEEEecCC
Confidence 8899998 7789999999999999999999988654
|
| >1vlu_A Gamma-glutamyl phosphate reductase; YOR323C, structural GENO JCSG, protein structure initiative, PSI, joint center for S genomics; 2.29A {Saccharomyces cerevisiae} SCOP: c.82.1.1 | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-75 Score=591.09 Aligned_cols=368 Identities=15% Similarity=0.165 Sum_probs=297.7
Q ss_pred CHHHHHHHHHhHHHHHHHHHHHcCCCh----HHHhhccHHH-HHHHHHHHHHhhhhhc------Cceecc---ccCcccc
Q 015031 1 MLKFADLIEEHAEVLAVLEALDAGKLH----SWAKMGDIPG-AANTLRYYAGAADKIH------GEVLKM---SRALQGY 66 (414)
Q Consensus 1 L~~~a~~l~~~~~~l~~~~~~e~Gk~~----~~~~~~ev~~-~~~~l~~~~~~~~~~~------~~~~~~---~~~~~~~ 66 (414)
|+++++.|++|+++|++++++|+|||. .++...|+.. +++.++++++.+++.. +...+. +.+...+
T Consensus 42 L~~~a~~l~~~~~ela~~~~~e~Gk~~~~g~~ea~~~ev~~~~~~~~~~~a~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ 121 (468)
T 1vlu_A 42 LYKIHDALKANAHAIEEANKIDLAVAKETGLADSLLKRLDLFKGDKFEVMLQGIKDVAELEDPVGKVKMARELDDGLTLY 121 (468)
T ss_dssp HHHHHHHHHHTHHHHHHHHHHHHHHHHHSSCCHHHHHHHCTTSTTHHHHHHHHHHHHHHSCCSSSCEEEEEEEETTEEEE
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCcccccccchHHHHHHhhhhHHHHHHHHHHHHHHhhcCCCCCeecccccCCCCceeE
Confidence 578999999999999999999999998 6654578888 8888998888776654 333231 1244568
Q ss_pred ccccCCcEEEEEcCCCcChHhhHHHHHHHHhcCCeEEEecCCCChhHHHHHHHHHH----H----cCCCCCeEEEEcCCc
Q 015031 67 TLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAK----L----AGVPDGVLNVVPGFG 138 (414)
Q Consensus 67 ~~~~P~Gvv~~i~p~n~P~~~~~~~~~~ALaaGN~vv~kps~~~~~~~~~l~~~~~----~----aglp~g~v~~~~~~~ 138 (414)
..++|+|||++|+||| | ...++++++||++||+||+|||+.+|.++..+++++. + +|+|+|++|+++ ++
T Consensus 122 ~~~~P~GVV~~I~pwN-P-~~~~~~~~~ALaaGN~VVlKps~~tp~t~~~l~~l~~~aL~e~~~~aGlP~gvv~vv~-~~ 198 (468)
T 1vlu_A 122 QVTAPVGVLLVIFESR-P-EVIANITALSIKSGNAAILKGGKESVNTFREMAKIVNDTIAQFQSETGVPVGSVQLIE-TR 198 (468)
T ss_dssp EEEEECCEEEEEESSC-T-HHHHHHHHHHHHHTCEEEEECCGGGHHHHHHHHHHHHHHHHHHHHHHCCCTTSEEECC-CC
T ss_pred EEecCcceEEEEeccC-h-HHHHHHHHHHHHcCCEEEEEcCCccHHHHHHHHHHHHHHHHhhchhcCCCCCcEEEEC-CH
Confidence 8999999999999999 9 9999999999999999999999999999999999995 8 999999999999 66
Q ss_pred hhHHHHHHhCCCcCeEEEeCCHHHHHHHHHHHhhCCCCceeeeCCCCCceeecCCCCHHHHHHHHHHHHhcccCCccccC
Q 015031 139 PTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVAS 218 (414)
Q Consensus 139 ~~~~~~l~~~~~~~~v~~tGs~~~~~~i~~~~~~~~~~~~~~e~gG~~~~iV~~dadl~~a~~~i~~~~~~~~Gq~C~a~ 218 (414)
.++++.|..||++|.|.||||+.+|+.|.+.+ ++|+++|+|||||+||++|||++.|++.+++++|.|+| .|+++
T Consensus 199 ~~~g~~L~~~p~vd~I~fTGS~~~g~~i~~~a----~kpv~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~G-~C~a~ 273 (468)
T 1vlu_A 199 QDVSDLLDQDEYIDLVVPRGSNALVRKIKDTT----KIPVLGHADGICSIYLDEDADLIKAKRISLDAKTNYPA-GCNAM 273 (468)
T ss_dssp --CGGGGGCTTTCCEEEEESCHHHHHHHHHTC----CSCBTTBCSCCEEEEECTTCCHHHHHHHHHHTTCC-----CCCC
T ss_pred HHHHHHHhhCCCcCEEEEECCHHHHHHHHHhc----CCCEEeecCCccceEECCCCCHHHHHHHHHHHhcCCCC-cCCcC
Confidence 67899999999999999999999999998764 69999999999999999999999999999999999999 99999
Q ss_pred cEEEEeCccHHHHHHHHHHHHhcccc---CCCCCCCCCccccCCHHHHHHHHHH-HHHhhhcCCeEeeCCcccCCCCcee
Q 015031 219 SRVYVQEGIYDEFEKKLVEKAKAWVV---GDPFDPAVRQGPQVDKKQFDRILSY-IEHGKREGATLLTGGKPIGKKGYYI 294 (414)
Q Consensus 219 ~~v~V~~~~~~~f~~~l~~~~~~~~~---g~~~~~~~~~gpl~~~~~~~~~~~~-i~~a~~~ga~v~~gg~~~~~~g~~~ 294 (414)
++||||+++ |+|+++|+++++++++ |+|.+ +++ ++++. ++++||+ | +
T Consensus 274 ~rvlV~~~i-d~f~~~l~~~~~~~~v~~~Gdp~~-----------------~~~~i~~a~----~~~~gG~-----g--~ 324 (468)
T 1vlu_A 274 ETLLINPKF-SKWWEVLENLTLEGGVTIHATKDL-----------------KTAYFDKLN----ELGKLTE-----A--I 324 (468)
T ss_dssp EEEEECTTS-TTHHHHHHHHHHHHCCCBEECHHH-----------------HHHHHHHHH----HHTCCCH-----H--H
T ss_pred cEEEEECCH-HHHHHHHHHHHHhcCCeecCCHHH-----------------hcccccccc----eeeccCC-----C--C
Confidence 999999999 9999999999999887 76532 344 55554 4677775 4 7
Q ss_pred eeEEEEeCCCCCcccccccccceEEEeeeCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHHhccceeEEEECCcCCCCC
Q 015031 295 EPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSIRAGIIWINCYFAFDS 374 (414)
Q Consensus 295 ~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~sv~s~d~~~~~~~~~~l~~g~v~vN~~~~~~~ 374 (414)
.||++ ++++|++++||+||||++|++|+|+||||+++|+++|||+++|||+|.+.++++++++++|+|+||++....+
T Consensus 325 ~Ptvl--v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~V~vN~~~~~~~ 402 (468)
T 1vlu_A 325 QCKTV--DADEEQDFDKEFLSLDLAAKFVTSTESAIQHINTHSSRHTDAIVTENKANAEKFMKGVDSSGVYWNASTRFAD 402 (468)
T ss_dssp HTTBC---------------CCCCEEEECCSHHHHHHHHTTSCSSCEEEEECSCHHHHHHHHHHCCCSEEEESSCGGGCC
T ss_pred CCcee--eCCCchhhhcCccCceEEEEEeCCHHHHHHHHHhCCCCceEEEEeCCHHHHHHHHHhCCeeEEEEcCCCCCCC
Confidence 89997 7889999999999999999999999999999999999999999999999999999999999999999877778
Q ss_pred CCCcc-----CCCCCCCCCcchHHHHHhhhcccEEEEeC
Q 015031 375 DCPYG-----GYKMSGFGRDCGLESLHNYLQVKSVVTPI 408 (414)
Q Consensus 375 ~~pfg-----G~~~sG~g~~~g~~~~~~~~~~k~i~~~~ 408 (414)
.+||| |+|.||+|++ |++|+++|++.|+|+.+.
T Consensus 403 ~~pfG~Gg~~G~~~SG~g~~-G~~gl~~f~~~K~v~~~~ 440 (468)
T 1vlu_A 403 GFRYGFGAEVGISTSKIHAR-GPVGLDGLVSYQYQIRGD 440 (468)
T ss_dssp -----------------------CCSGGGEEEEEEEECS
T ss_pred CCCCCCCCCcceecCCCCCC-cchHHHHhcceEEEEECC
Confidence 89999 9999999999 999999999999998764
|
| >2h5g_A Delta 1-pyrroline-5-carboxylate synthetase; dehydrogenase, structural genomics, structural genomics CONS SGC, oxidoreductase; 2.25A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.8e-73 Score=573.29 Aligned_cols=358 Identities=17% Similarity=0.176 Sum_probs=307.4
Q ss_pred CHHHHHHHHHhHHHHHHHHHHHc-------CCChHH---HhhccHHHHHHHHHHHHHhhhhhcCceeccc---cCccccc
Q 015031 1 MLKFADLIEEHAEVLAVLEALDA-------GKLHSW---AKMGDIPGAANTLRYYAGAADKIHGEVLKMS---RALQGYT 67 (414)
Q Consensus 1 L~~~a~~l~~~~~~l~~~~~~e~-------Gk~~~~---~~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~---~~~~~~~ 67 (414)
|+++++.|++|+++|++++++|+ |||..+ ....|+..+++.+++++.++++..+...+.. .+...+.
T Consensus 57 L~~~a~~l~~~~~ela~~~~~e~g~~~~~~Gk~~~~rl~~a~~ev~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~ 136 (463)
T 2h5g_A 57 IHHLADLLTDQRDEILLANKKDLEEAEGRLAAPLLKRLSLSTSKLNSLAIGLRQIAASSQDSVGRVLRRTRIAKNLELEQ 136 (463)
T ss_dssp HHHHHHHHHHTHHHHHHHHHHHHHHHTTTSCHHHHHTTCCCHHHHHHHHHHHHHHHHHCTTSTTCEEEEEEEETTEEEEE
T ss_pred HHHHHHHHHHhHHHHHHHHHHHhhcccccCCCchhhhhhhhHHHHHHHHHHHHHHHHhhHhhcCcccccccCCCCceeEE
Confidence 57899999999999999999999 699873 1247999999999999988877666543321 3445688
Q ss_pred cccCCcEEEEEcCCCcChHhhHHHHHHHHhcCCeEEEecCCCChhHHHHHHHHHHHc----CCCCCeEEEEcCCchhHHH
Q 015031 68 LREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLA----GVPDGVLNVVPGFGPTAGA 143 (414)
Q Consensus 68 ~~~P~Gvv~~i~p~n~P~~~~~~~~~~ALaaGN~vv~kps~~~~~~~~~l~~~~~~a----glp~g~v~~~~~~~~~~~~ 143 (414)
.++|+|||++|+||| |.... +++++||++||+||+|||+.+|.++..+++++.++ | |+|++|++++ +.++++
T Consensus 137 ~~~P~GVv~~I~p~n-P~n~p-~~~a~ALaaGN~VVlKps~~tp~t~~~l~~l~~~al~~~G-P~gvv~vv~g-~~~~g~ 212 (463)
T 2h5g_A 137 VTVPIGVLLVIFESR-PDCLP-QVAALAIASGNGLLLKGGKEAAHSNRILHLLTQEALSIHG-VKEAVQLVNT-REEVED 212 (463)
T ss_dssp EEEECCEEEEEESSC-TTHHH-HHHHHHHHHTCEEEEECCGGGHHHHHHHHHHHHHHHHTTT-CGGGEEECCT-TCCC--
T ss_pred EEEcCceEEEEecCC-cHHHH-HHHHHHHHcCCEEEEECCCCcHHHHHHHHHHHHHHHHhcC-CCCeEEEEcC-CHHHHH
Confidence 999999999999887 88777 89999999999999999999999999999999999 9 9999999999 667899
Q ss_pred HHHhCCCcCeEEEeCCHHHHHHHHHHHhhCCCCceeeeCCCCCceeecCCCCHHHHHHHHHHHHhcccCCccccCcEEEE
Q 015031 144 AIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYV 223 (414)
Q Consensus 144 ~l~~~~~~~~v~~tGs~~~~~~i~~~~~~~~~~~~~~e~gG~~~~iV~~dadl~~a~~~i~~~~~~~~Gq~C~a~~~v~V 223 (414)
.|+.||++|.|.||||+.+|+.|.+.++ ++|+++|+|||||+||++|||++.|++.+++++|.| ||.|++++||||
T Consensus 213 ~L~~~p~vd~I~FTGS~~~G~~i~~~aa---l~pv~lElGGk~p~iV~~dADl~~Aa~~i~~~~f~n-GQ~C~a~~rvlV 288 (463)
T 2h5g_A 213 LCRLDKMIDLIIPRGSSQLVRDIQKAAK---GIPVMGHSEGICHMYVDSEASVDKVTRLVRDSKCEY-PAACNALETLLI 288 (463)
T ss_dssp -----CCCSEEEEESCHHHHHHHHHHCS---SSCBCSCSCCCEEEEECTTCCTTTHHHHHHHHHHSC-TTSTTSEEEEEE
T ss_pred HHHhCCCcCEEEEECCHHHHHHHHHhcC---CCCEEEecCCcceEEEcCCCCHHHHHHHHHHHhccC-CCccccCcEEEE
Confidence 9999999999999999999999998864 899999999999999999999999999999999999 999999999999
Q ss_pred eCccHHHHHHHHHHHHhccccCCCCCCCCCccccCCHHHHHHHHHHHHHhhhcCCeEeeCCcccCCCCceeeeEEEEeCC
Q 015031 224 QEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIGKKGYYIEPTIFTNVT 303 (414)
Q Consensus 224 ~~~~~~~f~~~l~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~~~g~~~~Ptvl~~~~ 303 (414)
|++++| ||+ +++++++++++|++++.|+... ..++|+ +
T Consensus 289 ~~~i~d-------------------------~p~--------~~~~i~~~~~~Ga~v~~G~~~~-~~g~~~--------~ 326 (463)
T 2h5g_A 289 HRDLLR-------------------------TPL--------FDQIIDMLRVEQVKIHAGPKFA-SYLTFS--------P 326 (463)
T ss_dssp EGGGTT-------------------------SHH--------HHHHHHHHHHTTCEEEECHHHH-C--------------
T ss_pred eccccc-------------------------hHH--------HHHHHHHHHhCCCEEEeCCccc-ccCccC--------C
Confidence 999998 233 2345777888999998554322 234443 5
Q ss_pred CCCcccccccccceEEEeeeCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHHhccceeEEEECCcCCCCCCCCccCCCC
Q 015031 304 EDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSIRAGIIWINCYFAFDSDCPYGGYKM 383 (414)
Q Consensus 304 ~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~sv~s~d~~~~~~~~~~l~~g~v~vN~~~~~~~~~pfgG~~~ 383 (414)
++|++++||+||||++|++|+|+||||+++|++++||++||||+|.+.++++++++++|+|+||++....+.+||||+|.
T Consensus 327 ~~~~i~~eE~FgPvl~v~~~~~~deAi~~aN~~~~gLaa~v~t~d~~~a~~~~~~l~aG~V~iN~~~~~~~~~PfGG~k~ 406 (463)
T 2h5g_A 327 SEVKSLRTEYGDLELCIEVVDNVQDAIDHIHKYGSSHTDVIVTEDENTAEFFLQHVDSACVFWNASTRFSDGYRFGLGAE 406 (463)
T ss_dssp ---CCSSCCCCSSEEEEEEESSHHHHHHHHHHHCCSSEEEEECSCHHHHHHHHHHCCSSEEEESSCGGGCSTTTTTSSCC
T ss_pred CCchHHhccccCceEEEEEeCCHHHHHHHHHcCCCCceEEEEeCCHHHHHHHHHhCCeeEEEEeCCccCCCCCCCCCCcc
Confidence 78999999999999999999999999999999999999999999999999999999999999999877778899999999
Q ss_pred CCCC--Cc--chHHHHHhhhcccEEEEeC
Q 015031 384 SGFG--RD--CGLESLHNYLQVKSVVTPI 408 (414)
Q Consensus 384 sG~g--~~--~g~~~~~~~~~~k~i~~~~ 408 (414)
||+| ++ +|++|+++|++.|+|+.+.
T Consensus 407 SG~G~~r~~~~G~~gl~~ft~~K~v~~~~ 435 (463)
T 2h5g_A 407 VGISTSRIHARGPVGLEGLLTTKWLLRGK 435 (463)
T ss_dssp SCEECCSSSCCEECCGGGGEEEEEEEECS
T ss_pred CcCCCCcccCCCHHHHHHhceeEEEEECC
Confidence 9999 65 8999999999999998764
|
| >4ghk_A Gamma-glutamyl phosphate reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.25A {Burkholderia thailandensis} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.4e-72 Score=563.80 Aligned_cols=360 Identities=21% Similarity=0.229 Sum_probs=304.5
Q ss_pred CHHHHHHHHHhHHHHHHHHHHHcCCChH----HHhh-------ccHHHHHHHHHHHHHhhhhhcCceecc---ccCcccc
Q 015031 1 MLKFADLIEEHAEVLAVLEALDAGKLHS----WAKM-------GDIPGAANTLRYYAGAADKIHGEVLKM---SRALQGY 66 (414)
Q Consensus 1 L~~~a~~l~~~~~~l~~~~~~e~Gk~~~----~~~~-------~ev~~~~~~l~~~~~~~~~~~~~~~~~---~~~~~~~ 66 (414)
|+++++.|++|+++|++++++|+||+.. ++.. .|+..+++.+++++.+++.. +...+. ..+...+
T Consensus 54 L~~~a~~l~~~~~ela~~~~~e~gk~~~~g~~ea~~~~~~~~~~~v~~~~~~l~~~a~~~~~~-g~~~~~~~~~~~~~~~ 132 (444)
T 4ghk_A 54 LEAVARAIERDAGALKAANARDVARAKDKGLDAAFVDRLTLSDKALKTMVEGLRQVATLPDPI-GEMSNLKYRPSGIQVG 132 (444)
T ss_dssp HHHHHHHHHHSHHHHHHHHHHHHCC------CCSHHHHHCCCTTHHHHHHHHHHHHHHSCCCT-TCEEEEEECTTSCEEE
T ss_pred HHHHHHHHHhhHHHHHHHHHHHHhhhhhccchHHHHHHhhccHHHHHHHHHHHHHHHhhcccc-CccCCcccCCCCccce
Confidence 5789999999999999999999999853 3221 47899999999999887643 333332 2355678
Q ss_pred ccccCCcEEEEEcCCCcChHhhHHHHHHHHhcCCeEEEecCCCChhHHHHHHHHH----HHcCCCCCeEEEEcCCch-hH
Q 015031 67 TLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLA----KLAGVPDGVLNVVPGFGP-TA 141 (414)
Q Consensus 67 ~~~~P~Gvv~~i~p~n~P~~~~~~~~~~ALaaGN~vv~kps~~~~~~~~~l~~~~----~~aglp~g~v~~~~~~~~-~~ 141 (414)
++++|+|||++|+||| | ...++++++||++||+||+|||+.+|.++..+.+++ .++|+|+|++|+++|++. +.
T Consensus 133 ~~~~P~GVV~~I~p~n-P-~~~~~~~~~ALaaGN~VVlKps~~tp~t~~~l~~l~~~~l~~aGlP~gvv~vv~g~~~~~~ 210 (444)
T 4ghk_A 133 QMRVPLGVIGIIYESR-P-NVTIDAAALCLKSGNATILRGGSEALESNTALAKLIGEGLAEAGLPQDTVQVVETADRAAV 210 (444)
T ss_dssp EEEEECSEEEEECCSC-H-HHHHHHHHHHHHTTCEEEEECCGGGHHHHHHHHHHHHHHHHHTTCCGGGEEECCCCCTHHH
T ss_pred EEEeccEEEEEEeCCC-c-HHHHHHHHHHHHcCCEEEEECCccchHHHHHHHHHHHHHHHHcCCCcccEEEEeCCCHHHH
Confidence 8999999999999998 8 588899999999999999999999999999999997 799999999999998654 57
Q ss_pred HHHHHhCCCcCeEEEeCCHHHHHHHHHHHhhCCCCceeeeCCCCCceeecCCCCHHHHHHHHHHHHhcccCCccccCcEE
Q 015031 142 GAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRV 221 (414)
Q Consensus 142 ~~~l~~~~~~~~v~~tGs~~~~~~i~~~~~~~~~~~~~~e~gG~~~~iV~~dadl~~a~~~i~~~~~~~~Gq~C~a~~~v 221 (414)
+..|..||++|.|.||||+.+++.+.+.+ ++|+++|+|||||+||++|||++.|++.+++++|.|+| .|++++||
T Consensus 211 ~~~L~~~p~vd~V~fTGs~~vg~~v~~~a----~~pv~lELGGk~p~IV~~dADl~~Aa~~i~~~~~~n~G-~C~a~~rv 285 (444)
T 4ghk_A 211 GRLITMTEYVDVIVPRGGKSLIERLINEA----RVPMIKHLDGICHVYVDDRASVTKALTVCDNAKTHRYG-TCNTMETL 285 (444)
T ss_dssp HHHTTCTTTCSEEEECSCHHHHHHHHHHC----CSCBCCCCCCCCEEEECTTCCHHHHHHHCC----------CCCCCEE
T ss_pred HHHHhcCCCccEEEEECcHHHHHHHHHhC----CCCEEEEcCCcCeEEECCCCCHHHHHHHHHHHhcCCCc-ccCcCceE
Confidence 88888899999999999999999998764 69999999999999999999999999999999999999 99999999
Q ss_pred EEeCccHHHHHHHHHHHHhcccc---CCCCCCCCCccccCCHHHHHHHHHHHHHhhhcCCeEeeCCcccCCCCceeeeEE
Q 015031 222 YVQEGIYDEFEKKLVEKAKAWVV---GDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIGKKGYYIEPTI 298 (414)
Q Consensus 222 ~V~~~~~~~f~~~l~~~~~~~~~---g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~~~g~~~~Ptv 298 (414)
|||++++|+|+++|+++++++++ |+|. ..++++++. .| +
T Consensus 286 lV~~~i~d~f~~~l~~~~~~~~~~~~g~p~-----------------~~~~i~~a~---------------~G------~ 327 (444)
T 4ghk_A 286 LVARGIAPAVLSPLGRLYREKGVELRVDAD-----------------ARAVLEAAG---------------VG------P 327 (444)
T ss_dssp EEEGGGHHHHHHHHHHHHHHTTCEEEECHH-----------------HHHHHHHTT---------------CC------C
T ss_pred EEeHHHHHHHHHHHHHHHHHcCCeecCCHH-----------------HHHHHHhcc---------------cC------c
Confidence 99999999999999999999887 6542 135565542 11 1
Q ss_pred EEeCCCCCcccccccccceEEEeeeCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHHhccceeEEEECCcCCCCCCCCc
Q 015031 299 FTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSIRAGIIWINCYFAFDSDCPY 378 (414)
Q Consensus 299 l~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~sv~s~d~~~~~~~~~~l~~g~v~vN~~~~~~~~~pf 378 (414)
+ ++++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.+.++++++++++|+|+||++..+.+..||
T Consensus 328 ~--~~~~~~~~~eEiFGPVl~v~~~~~~deAi~~aN~~~~gL~a~v~t~d~~~a~~~a~~l~aG~V~vN~~~~~~~~~pf 405 (444)
T 4ghk_A 328 L--VDATDEDWRTEYLAPVLAIKIVDGIDAAIEHINEYGSHHTDAIVTEDHDRAMRFLREVDSASVMVNASTRFADGFEF 405 (444)
T ss_dssp C--EECCSGGGTCC---CEEEEEEESSHHHHHHHHHHHSCSSEEEEECSBHHHHHHHHHHCCSSEEEEEECGGGCSTTTT
T ss_pred c--cCCCchhhhccccCceEEEEEeCCHHHHHHHHHhCCCCceEEEEeCCHHHHHHHHHhCCcceEEEcCCCccCCCCCc
Confidence 1 34678999999999999999999999999999999999999999999999999999999999999998877788999
Q ss_pred cCCCCCCCC----CcchHHHHHhhhcccEEEEeC
Q 015031 379 GGYKMSGFG----RDCGLESLHNYLQVKSVVTPI 408 (414)
Q Consensus 379 gG~~~sG~g----~~~g~~~~~~~~~~k~i~~~~ 408 (414)
||.+.||+| +++|++|+++||++|+|+++.
T Consensus 406 Gg~~~sG~g~~~~~~~G~~gl~~~t~~K~v~~~~ 439 (444)
T 4ghk_A 406 GLGAEIGISNDKLHARGPVGLEGLTSLKYVVLGH 439 (444)
T ss_dssp TCSCCSEEECCSSSCCEEECGGGGEEEEEEEEEE
T ss_pred CCcccccccCCcccCCChhHHHhhceEEEEEECC
Confidence 999999998 578999999999999998764
|
| >1o20_A Gamma-glutamyl phosphate reductase; TM0293, structural genom JCSG, PSI, protein structure initiative, joint center for S genomics; 2.00A {Thermotoga maritima} SCOP: c.82.1.1 | Back alignment and structure |
|---|
Probab=100.00 E-value=3.1e-72 Score=561.36 Aligned_cols=359 Identities=19% Similarity=0.221 Sum_probs=315.4
Q ss_pred CHHHHHHHHHhHHHHHHHHHHHcCCCh----HHHh-------hccHHHHHHHHHHHHHhhhhhcCceecc---ccCcccc
Q 015031 1 MLKFADLIEEHAEVLAVLEALDAGKLH----SWAK-------MGDIPGAANTLRYYAGAADKIHGEVLKM---SRALQGY 66 (414)
Q Consensus 1 L~~~a~~l~~~~~~l~~~~~~e~Gk~~----~~~~-------~~ev~~~~~~l~~~~~~~~~~~~~~~~~---~~~~~~~ 66 (414)
|+++++.|++|+++|++++++|+||+. .++. ..|+..+++.+++++.++++ .+...+. +.+...+
T Consensus 42 L~~~a~~l~~~~~~la~~~~~e~gk~~~~g~~ea~~~~~~~~~~ev~~~~~~l~~~a~~~~~-~g~~~~~~~~~~~~~~~ 120 (427)
T 1o20_A 42 IKKIAEKLDERRKEILEANRIDVEKARERGVKESLVDRLALNDKRIDEMIKACETVIGLKDP-VGEVIDSWVREDGLRIA 120 (427)
T ss_dssp HHHHHHHHHHTHHHHHHHHHHHHHHHHHTTCCHHHHHHHCCCHHHHHHHHHHHHHHHHSCCC-TTCEEEEEECTTSCEEE
T ss_pred HHHHHHHHHHhHHHHHHHHHHHhhccccccccHHHHHHHhcCHHHHHHHHHHHHHHHhcccc-cCccccccccCCCceeE
Confidence 578999999999999999999999885 3432 25899999999999988765 3443332 1244567
Q ss_pred ccccCCcEEEEEcCCCcChHhhHHHHHHHHhcCCeEEEecCCCChhHHHHHHHHHH----HcCCCCCeEEEEcCC-chhH
Q 015031 67 TLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAK----LAGVPDGVLNVVPGF-GPTA 141 (414)
Q Consensus 67 ~~~~P~Gvv~~i~p~n~P~~~~~~~~~~ALaaGN~vv~kps~~~~~~~~~l~~~~~----~aglp~g~v~~~~~~-~~~~ 141 (414)
.+++|+|||++|+||| +...++++++||++||+||+|||+.+|+++..+++++. ++|+|+|++|++++. ..+.
T Consensus 121 ~~~~P~GVV~~I~p~p--~~~~~~~~~~ALaaGNtVVlKps~~tp~t~~~l~~l~~~al~eaGlP~gvv~vv~g~~~~~~ 198 (427)
T 1o20_A 121 RVRVPIGPIGIIYESR--PNVTVETTILALKSGNTILLRGGSDALNSNKAIVSAIREALKETEIPESSVEFIENTDRSLV 198 (427)
T ss_dssp EEEEECCCEEEECCSC--THHHHHHHHHHHHTTCCEEEECCGGGHHHHHHHHHHHHHHHTTSSSCGGGEEECCCCCTHHH
T ss_pred EEeecceeEEEEecCC--hHHHHHHHHHHHHcCCEEEEECCHhHHHHHHHHHHHHHHHHHHcCCCcccEEEecCCChHHH
Confidence 8999999999999875 47888999999999999999999999999999999997 689999999999984 4567
Q ss_pred HHHHHhCCCcCeEEEeCCHHHHHHHHHHHhhCCCCceeeeCCCCCceeecCCCCHHHHHHHHHHHHhcccCCccccCcEE
Q 015031 142 GAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRV 221 (414)
Q Consensus 142 ~~~l~~~~~~~~v~~tGs~~~~~~i~~~~~~~~~~~~~~e~gG~~~~iV~~dadl~~a~~~i~~~~~~~~Gq~C~a~~~v 221 (414)
++.|..||++|.|.||||+.+|+.|.+.+ .+|+++|+|||||+||++|||++.|++.+++++|.|+| .|++++||
T Consensus 199 ~~~L~~~~~v~~I~fTGS~~~G~~i~~~a----~~~v~lELGGk~p~iV~~dADl~~Aa~~i~~~~f~n~G-~C~a~~rv 273 (427)
T 1o20_A 199 LEMIRLREYLSLVIPRGGYGLISFVRDNA----TVPVLETGVGNCHIFVDESADLKKAVPVIINAKTQRPG-TCNAAEKL 273 (427)
T ss_dssp HHHTTCTTTCSEEEECSCHHHHHHHHHHC----SSCBCCCCCCCEEEEECTTSCHHHHHHHHHHHHHSCTT-STTSEEEE
T ss_pred HHHHhCCCCccEEEeCCChHHHHHHHHhc----CCCEEEecCCCceEEEeCCCCHHHHHHHHHHHhccCCC-CCCCccEE
Confidence 88899999999999999999999998875 59999999999999999999999999999999999999 99999999
Q ss_pred EEeCccHHHHHHHHHHHHhccccCCCCCCCCCccccCCHHHHHHHHHHHHHhhhcCCeEeeCCcccCCCCceeeeEEEEe
Q 015031 222 YVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIGKKGYYIEPTIFTN 301 (414)
Q Consensus 222 ~V~~~~~~~f~~~l~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~~~g~~~~Ptvl~~ 301 (414)
|||+++||+|+++|++++++++++ +.||... .+ |+ |||
T Consensus 274 ~V~~~i~d~f~~~l~~~~~~~~~~-----------------------------------~~gg~~~--~~-~~-Ptl--- 311 (427)
T 1o20_A 274 LVHEKIAKEFLPVIVEELRKHGVE-----------------------------------VRGCEKT--RE-IV-PDV--- 311 (427)
T ss_dssp EEEHHHHHHHHHHHHHHHHHTTCE-----------------------------------EEECHHH--HH-HS-TTS---
T ss_pred EEehhhHHHHHHHHHHHHHHcCCe-----------------------------------eecChhh--hh-hC-Ccc---
Confidence 999999999999999999987652 1122211 12 33 885
Q ss_pred CCCCCcccccccccceEEEeeeCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHHhccceeEEEECCcCCCCCCCCccCC
Q 015031 302 VTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSIRAGIIWINCYFAFDSDCPYGGY 381 (414)
Q Consensus 302 ~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~sv~s~d~~~~~~~~~~l~~g~v~vN~~~~~~~~~pfgG~ 381 (414)
++++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.+.++++++++++|+|+||++....+.+||||.
T Consensus 312 ~~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~~G~V~iN~~~~~~~~~pfGg~ 391 (427)
T 1o20_A 312 VPATEDDWPTEYLDLIIAIKVVKNVDEAIEHIKKYSTGHSESILTENYSNAKKFVSEIDAAAVYVNASTRFTDGGQFGFG 391 (427)
T ss_dssp EECCGGGTTCCCCSSEEEEEEESSHHHHHHHHHHHCCSSEEEEECSCHHHHHHHHHHCCSSEEEESSCGGGCSTTTTTCS
T ss_pred cCCCcchhhcccccceEEEEEECCHHHHHHHHHhCCCCCeEEEEeCCHHHHHHHHHhCCccEEEECCCCccCCCCCCCCc
Confidence 24578899999999999999999999999999999999999999999999999999999999999998777788999999
Q ss_pred CCCCCC----CcchHHHHHhhhcccEEEEeCC
Q 015031 382 KMSGFG----RDCGLESLHNYLQVKSVVTPIF 409 (414)
Q Consensus 382 ~~sG~g----~~~g~~~~~~~~~~k~i~~~~~ 409 (414)
|.||+| +++|++|+++|+++|+|+.+++
T Consensus 392 ~~SG~g~~~~~~~g~~gl~~~~~~k~v~~~~~ 423 (427)
T 1o20_A 392 AEIGISTQRFHARGPVGLRELTTYKFVVLGEY 423 (427)
T ss_dssp CCSCEECSSSSCCEECCTGGGEEEEEEEECSS
T ss_pred ccccccCCcccCCChHHHHHHhceEEEEECCC
Confidence 999997 4679999999999999988754
|
| >3my7_A Alcohol dehydrogenase/acetaldehyde dehydrogenase; ACDH, PSI, MCSG, structural genomics, midwest center for STR genomics; 2.30A {Vibrio parahaemolyticus} | Back alignment and structure |
|---|
Probab=100.00 E-value=7.5e-71 Score=555.58 Aligned_cols=383 Identities=19% Similarity=0.232 Sum_probs=312.2
Q ss_pred CHHHHHHHHHhHHHHHHHHHHHcCCChHHHhhccHHHHHHHH-HHHHHhhhhhcCceeccccCccccccccCCcEEEEEc
Q 015031 1 MLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTL-RYYAGAADKIHGEVLKMSRALQGYTLREPIGVVGHII 79 (414)
Q Consensus 1 L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l-~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~ 79 (414)
|+++++.|++|+++|++++++|+||+..++...|+..+.+.+ ++++. .+. ...++.+.+...+..++|+|||++|+
T Consensus 35 l~~~a~~l~~~~~~la~~~~~e~Gk~~~e~~~~~~~~a~~~~~~~~~~--~~~-~g~~~~~~~~~~~~~~~P~GVv~~I~ 111 (452)
T 3my7_A 35 FRAASLAANQARIPLAQQAVEESGMGIVEDKVIKNHFASEFIYNKYKD--EQT-CGILEEDDNLGTMTIAEPVGIICGIV 111 (452)
T ss_dssp HHHHHHHHHHTHHHHHHHHHHHHCCSCHHHHHHHHHHHHHHHHHHHTT--CCC-SEEC-------CEEEEEECCEEEEEE
T ss_pred HHHHHHHHHHhHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHhhh--ccc-cccccCCCCCceEEEecCceEEEEEc
Confidence 578999999999999999999999999986545666666666 33322 111 11222234456788999999999999
Q ss_pred CCCcChHhhHHHHHHHHhcCCeEEEecCCCChhHHHHHHHHHH----HcCCCCCeEEEEcCCchhHHHHHHhCCCcCeEE
Q 015031 80 PWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAK----LAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVS 155 (414)
Q Consensus 80 p~n~P~~~~~~~~~~ALaaGN~vv~kps~~~~~~~~~l~~~~~----~aglp~g~v~~~~~~~~~~~~~l~~~~~~~~v~ 155 (414)
|||||+...++++++||++||+||+|||+.+|.++..+++++. ++|+|+|++|++++++.+.++.|+.||+++.|.
T Consensus 112 P~N~P~~~~~~k~~~ALaaGN~VVlKps~~tp~~~~~~~~~~~~a~~~aG~P~gvv~~v~g~~~~~~~~L~~~p~v~~V~ 191 (452)
T 3my7_A 112 PTTNPTSTAIFKSLISLKTRNGIIFSPHPRAKNSTNDAAKLVLDAAVAAGAPKDIIGWIDQPSVELSNALMKHDDIALIL 191 (452)
T ss_dssp CTTSTTHHHHHHHHHHHHTTCEEEEEECGGGHHHHHHHHHHHHHHHHHTTCCTTSEEECSSCCHHHHHHHHHCTTCCEEE
T ss_pred CCCChHHHHHHHHHHHHhcCCeEEEEcCCCchHHHHHHHHHHHHHHHHcCCCcCcEEEEcCCCHHHHHHHHhCCCccEEE
Confidence 9999999999999999999999999999999999988887765 799999999999998889999999999999999
Q ss_pred EeCCHHHHHHHHHHHhhCCCCceeeeCCCCCceeecCCCCHHHHHHHHHHHHhcccCCccccCcEEEEeCccHHHHHHHH
Q 015031 156 FTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKL 235 (414)
Q Consensus 156 ~tGs~~~~~~i~~~~~~~~~~~~~~e~gG~~~~iV~~dadl~~a~~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f~~~l 235 (414)
||||+..++ .++ ++++|+++|+|||+|+||++|||++.|++.+++++|+|+||.|+++++||||+++||+|+++|
T Consensus 192 fTGs~~~~~----~a~-~~~kp~~~e~gG~~p~iV~~dADl~~Aa~~iv~s~~~~~GQ~C~a~~rv~V~~~i~d~f~~~l 266 (452)
T 3my7_A 192 ATGGPGMVK----AAY-SSGKPAIGVGAGNVPVVIDETADIKRAVASVLMSKTFDNGVVCASEQAVIVVDEVYDEVKERF 266 (452)
T ss_dssp ECSCHHHHH----HHH-TSSSCEEECC--CEEEEECTTSCHHHHHHHHHHGGGGGGGCCTTCEEEEEEEGGGHHHHHHHH
T ss_pred EECcHHHHH----HHH-hcCCCEEecCCCCCeEEEeCCCCHHHHHHHHHHHHhCCCCCccCCCcEEEEcHHHHHHHHHHH
Confidence 999998544 333 788999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhccccCCCCCCCCCccccCCHHHHHHHHHHHHHhhhcCCeEeeCCccc---CCCCceeeeEE-------EEeCCCC
Q 015031 236 VEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPI---GKKGYYIEPTI-------FTNVTED 305 (414)
Q Consensus 236 ~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ga~v~~gg~~~---~~~g~~~~Ptv-------l~~~~~~ 305 (414)
+++ .||+++++++++++++++++...|+++ +||... ...|+|++||+ +.+++++
T Consensus 267 ~~~---------------~gpli~~~~~~~v~~~i~~~~~~~a~v-~G~~~~~~~~~~G~~v~pt~~vl~~~~~~~v~~~ 330 (452)
T 3my7_A 267 ASH---------------KAHVLSKTDADKVRKVLLIDGALNAKI-VGQPATAIAEMAGVKVPADTKVLIGEGLGKVSYD 330 (452)
T ss_dssp HTT---------------TEEECCHHHHHHHHHHHEETTEECGGG-TTCCHHHHHHHHTCCCCTTCCEEEEECSSSCCTT
T ss_pred HHh---------------CCCcCCHHHHHHHHHHHHhhcccCCeE-ecCccchhHHhCCceeCCCeeEEeeccccCCCCc
Confidence 864 389999999999999998877777776 476542 13689999997 5578889
Q ss_pred CcccccccccceEEEeeeCCHHHHHHHHhcCC----CCceEEEecCCHHHHHH---HHhccceeEEEECCcCCCC-----
Q 015031 306 MLIAKNEIFGPVMALMKFKTVEEAIKSANNTR----YGLAAGIMTKDLNVANT---VSRSIRAGIIWINCYFAFD----- 373 (414)
Q Consensus 306 ~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~----~gl~~sv~s~d~~~~~~---~~~~l~~g~v~vN~~~~~~----- 373 (414)
+++.+ |+||||++|++|+|+||||+++|++. +||+++|||+|.+.+++ +++++++|+|+||++..+.
T Consensus 331 ~~~~~-E~FgPVl~v~~~~~~~eAi~~an~~~~~~g~Glta~i~t~d~~~a~~i~~~a~~l~~G~V~VN~~~~~Gg~G~~ 409 (452)
T 3my7_A 331 DAFAH-EKLSPTLGMFRADNFEDAVAQAVTMVEIGGIGHTSGLYTNQDVNADRIRYFGDKMKTARILINIPTTHGGIGDL 409 (452)
T ss_dssp CGGGS-CCSSSEEEEEEESSHHHHHHHHHHHHHHHSSCCEEEEESCTTTCHHHHHHHHHHCCCSEEEESCCCC-------
T ss_pred chhhc-CccCcEEEEEEeCCHHHHHHHHHhcccccCCCCEEEEEcCCHHHHHHHHHHHHhCCEEEEEECCCCCCcccccc
Confidence 99875 89999999999999999999999974 99999999999887777 9999999999999976421
Q ss_pred ------CCCCccCCCCCCCCCcchHHHHHhhhcccEEEEeCC
Q 015031 374 ------SDCPYGGYKMSGFGRDCGLESLHNYLQVKSVVTPIF 409 (414)
Q Consensus 374 ------~~~pfgG~~~sG~g~~~g~~~~~~~~~~k~i~~~~~ 409 (414)
+.+.+ |++..|.+..++.-+.+++++.|+|.++..
T Consensus 410 ~~f~~~~~~t~-g~g~~Gg~~~~~nv~~~~l~n~~~v~~~~~ 450 (452)
T 3my7_A 410 YNFNVAPSLTL-GCGSWGGNSISENVGPKHLINKKTVAKRAE 450 (452)
T ss_dssp ----------------------CCCCCGGGGEEEEEEECCC-
T ss_pred cccCcCceEee-eccccCCCccCCCCChhHeeeeeEEEeecC
Confidence 11111 444445555666778899999999877643
|
| >4gic_A HDH, histidinol dehydrogenase; protein structure initiative, STR genomics, PSI-biology, NEW YORK structural genomics researc consortium; 2.05A {Methylococcus capsulatus} | Back alignment and structure |
|---|
Probab=97.71 E-value=0.014 Score=56.29 Aligned_cols=262 Identities=19% Similarity=0.196 Sum_probs=148.4
Q ss_pred ccCccccccccCCcEEEEEcCCC---cChHhhHHHHHHHHhcCCeE-E-EecCCCChhHHHHHHHHHHHcCCCCCeEEEE
Q 015031 60 SRALQGYTLREPIGVVGHIIPWN---FPTTMFFMKVSPALAAGCTM-I-VKPAEQTPLIALYFAHLAKLAGVPDGVLNVV 134 (414)
Q Consensus 60 ~~~~~~~~~~~P~Gvv~~i~p~n---~P~~~~~~~~~~ALaaGN~v-v-~kps~~~~~~~~~l~~~~~~aglp~g~v~~~ 134 (414)
..|.....++.|+--|++..|.- ||-..+| ..+||-.||..= | ..|++. -.....+.-+...+|..+ +.
T Consensus 118 ~~G~~~g~~~~Pi~~VGlYVPGG~A~ypSsvLM-~aiPAkVAGV~~Iv~~tPp~~-G~i~p~iL~AA~l~Gv~e----Iy 191 (423)
T 4gic_A 118 ADGTLLGQKITPLDRVGLYVPGGKAAYPSSVLM-NAVPAKVAGVPELIMAVPAPR-GELNALVLAAAYISGVDR----VF 191 (423)
T ss_dssp TTSCEEEEEEEECSEEEEECCCSTTCCHHHHHH-HHHHHHHHTCSEEEEECCCGG-GCCCHHHHHHHHHHTCCE----EE
T ss_pred CCCCEEEEEEEEecceeEEeeCCCCchhhHHHH-hhccHHHhCCCeEEEecCCCC-CCccHHHHHHHHhcCCcE----EE
Confidence 35666778889999999999954 6654444 578999999873 3 344332 122233444455667653 33
Q ss_pred cCCchhHHHHHHh----CCCcCeEEEeCCHHHHHHHHHHHhhCCCCceeeeCCCCCceee-cCCCCHHHHHHHHHHHHhc
Q 015031 135 PGFGPTAGAAIAS----HMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLI-FDDVDVNTAADMALLGILF 209 (414)
Q Consensus 135 ~~~~~~~~~~l~~----~~~~~~v~~tGs~~~~~~i~~~~~~~~~~~~~~e~gG~~~~iV-~~dadl~~a~~~i~~~~~~ 209 (414)
.-.|.....+|.- -|.+|.|+=.|..-++.+ ++.. ....-+=+..|-.--+|| ++++|.+..+.+++.-+=+
T Consensus 192 ~vGGAQAIAAlAyGTetI~~VDkIvGPGN~yVa~A--Kr~v-~g~VgIDm~AGPSEilViAD~~a~p~~vAaDLlsQAEH 268 (423)
T 4gic_A 192 RIGGAQAVAALAYGTETVPRVDKIVGPGNIYVATA--KKLV-FGQVGIDMVAGPSEILVISDGRTDPDWIAMDLFSQAEH 268 (423)
T ss_dssp CCCHHHHHHHHHHCCSSSCCCSEEECCCCHHHHHH--HHHH-BTTBEECCCCCCCEEEEEECSCSCHHHHHHHHHHHHTT
T ss_pred EcCChhhhhhhccCCCcccceeEEecCCcHHHHHH--HHHh-cCCcCcccccccceEEEEeCCCCCHHHHHHHHHHhhcc
Confidence 2224444444443 578999999999876542 2222 111111122222222333 5568999999988876654
Q ss_pred ccCCccccCcEEEEeCccHHHHHHHHHHHHhccccCCCCCCCCCccccCCHHHHHHHHHHHHHhhhcCCeEeeCCcccCC
Q 015031 210 NKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIGK 289 (414)
Q Consensus 210 ~~Gq~C~a~~~v~V~~~~~~~f~~~l~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~~ 289 (414)
... .+.++|..+ .+|.+++.+.+.+..-.-| .. +. +..+..+
T Consensus 269 d~~-----a~~iLvT~s--~~la~~V~~~i~~~l~~l~-----------r~---~i----~~~sl~~------------- 310 (423)
T 4gic_A 269 DED-----AQAILISPD--AAHLEAVQASIERLLPGME-----------RA---EV----IRTSLER------------- 310 (423)
T ss_dssp CTT-----CEEEEEESC--HHHHHHHHHHHHHHGGGCT-----------TH---HH----HHHHHHH-------------
T ss_pred CCC-----CeEEEEeCc--HHHHHHHHHHHHHHHhhCc-----------cH---HH----HHHHHhc-------------
Confidence 433 334666655 3455555444443210001 11 11 1112110
Q ss_pred CCceeeeEEEEeCCCCCcccccccccceEEEeeeCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHHhccc-eeEEEECC
Q 015031 290 KGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSIR-AGIIWINC 368 (414)
Q Consensus 290 ~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~sv~s~d~~~~~~~~~~l~-~g~v~vN~ 368 (414)
+| .++.++|++||++++|..- .=..-|.++|+. .+..+++ +|.|++..
T Consensus 311 ------------------------~g---~ii~v~~~~ea~~~~N~~A-PEHLel~~~~~~---~~l~~i~nAGaIFlG~ 359 (423)
T 4gic_A 311 ------------------------RG---GMILVDDLEQAAAVANRIA-PEHLELSVESPE---VLVESIRNAGAIFMGR 359 (423)
T ss_dssp ------------------------HC---EEEECSSHHHHHHHHHHHC-CSEEEEESSCHH---HHGGGCCCCSEEEEC-
T ss_pred ------------------------Cc---eEEEEeehHHHHHHHHhhC-hHHhhhhhCCHH---HHHhhCcEeceeecCC
Confidence 11 3456799999999999842 235678888864 5777776 89999987
Q ss_pred cCC---------CCCCCCccCCCCCCCCCcchHHHHHhhhcccEE
Q 015031 369 YFA---------FDSDCPYGGYKMSGFGRDCGLESLHNYLQVKSV 404 (414)
Q Consensus 369 ~~~---------~~~~~pfgG~~~sG~g~~~g~~~~~~~~~~k~i 404 (414)
++. .++-+|-+ |..++.+.-+...|+++.++
T Consensus 360 ~tp~~~GDY~aG~NHvLPT~-----G~Ar~~sgLsv~~F~K~~s~ 399 (423)
T 4gic_A 360 YTAEALGDYCAGPNHVLPTS-----GTARFSSPLGVYDFQKRSSL 399 (423)
T ss_dssp ---------------CCCCT-----TGGGTCCCCCGGGGEEEEEE
T ss_pred CCchhhhhcCcCCCccCCCC-----CcccccCCCCHHHeeeeeeE
Confidence 543 12445554 45566666678888887665
|
| >1kae_A HDH, histidinol dehydrogenase; L-histidinol dehydrogenase, homodimer, rossman fold, 4 domai L-histidine biosynthesis, NAD cofactor; HET: HSO NAD; 1.70A {Escherichia coli} SCOP: c.82.1.2 PDB: 1k75_A* 1kah_A* 1kar_A | Back alignment and structure |
|---|
Probab=97.60 E-value=0.031 Score=54.08 Aligned_cols=259 Identities=19% Similarity=0.200 Sum_probs=150.2
Q ss_pred cCccccccccCCcEEEEEcCC---CcChHhhHHHHHHHHhcCCeEEEecCCCChhHHHHHHHHHHHcCCCCCeEEEEcCC
Q 015031 61 RALQGYTLREPIGVVGHIIPW---NFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGF 137 (414)
Q Consensus 61 ~~~~~~~~~~P~Gvv~~i~p~---n~P~~~~~~~~~~ALaaGN~vv~kps~~~~~~~~~l~~~~~~aglp~g~v~~~~~~ 137 (414)
.|.....++.|+--|++..|. -||-..+| ..+||-.+|..=|+-.+|- .....+.-....+|..+ +..-.
T Consensus 113 ~Gv~~gq~~~Pi~rvGlYVPGG~a~ypSsvLM-~aiPAkVAGV~~Iv~~tPp--~i~p~iL~AA~l~Gv~e----Iy~vG 185 (434)
T 1kae_A 113 PGVRCQQVTRPVASVGLYIPGGSAPLFSTVLM-LATPASIAGCKKVVLCSPP--PIADEILYAAQLCGVQD----VFNVG 185 (434)
T ss_dssp TTEEEEEEEEECSEEEEECCCSSSCCTHHHHH-HHHHHHHHTCSEEEEEECS--SCCHHHHHHHHHTTCCE----EEECC
T ss_pred CCcEEEEEEeehheEEEEecCCCCCchhHHHH-hhccHhhcCCCeEEEECCC--CCCHHHHHHHHHcCCCE----Eeecc
Confidence 355666788999999999997 46654444 5789999998765433331 12223344455666653 22222
Q ss_pred chhHHHHHH----hCCCcCeEEEeCCHHHHHHHHHHHhhCCCCceeee-CCCCCce--eecCCCCHHHHHHHHHHHHhcc
Q 015031 138 GPTAGAAIA----SHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLE-LGGKSPL--LIFDDVDVNTAADMALLGILFN 210 (414)
Q Consensus 138 ~~~~~~~l~----~~~~~~~v~~tGs~~~~~~i~~~~~~~~~~~~~~e-~gG~~~~--iV~~dadl~~a~~~i~~~~~~~ 210 (414)
|.....+|. +-|.+|.|+=.|..-+...=..... ..+. |-.. ..|.+=+ |-+++||.+..+.+++.-+=+.
T Consensus 186 GAQAIAAlAyGTetIp~VDkI~GPGN~yVa~AKr~Vs~-~~G~-VgIDm~AGPSEilViAD~tAnp~~vAaDLLsQAEHd 263 (434)
T 1kae_A 186 GAQAIAALAFGTESVPKVDKIFGPGNAFVTEAKRQVSQ-RLDG-AAIDMPAGPSEVLVIADSGATPDFVASDLLSQAEHG 263 (434)
T ss_dssp HHHHHHHHHHCCSSSCCCSEEECCCCHHHHHHHHHHHH-CTTS-CEESCCCCCCEEEEEECTTSCHHHHHHHHHHHHTTC
T ss_pred cHHHHHHHHcCCCCCCCccEEECCCcHHHHHHHHHhHh-hcCc-cccCCCCCCceEEEEeCCCCCHHHHHHHHHHHhccC
Confidence 433333333 2478999999888765442211110 1111 2111 1333333 3356789999998888665444
Q ss_pred cCCccccCcEEEEeCc--cHHHHHHHHHHHHhccccCCCCCCCCCccccCCHHHHHHHHHHHHHhhhcCCeEeeCCcccC
Q 015031 211 KGEICVASSRVYVQEG--IYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIG 288 (414)
Q Consensus 211 ~Gq~C~a~~~v~V~~~--~~~~f~~~l~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~ 288 (414)
.. .+.++|..+ ..++..+.+.+++..+. . . +.++.+.
T Consensus 264 ~~-----a~aiLvT~s~~la~~V~~ev~~ql~~lp---------------r---~----~ia~~sl-------------- 302 (434)
T 1kae_A 264 PD-----SQVILLTPAADMARRVAEAVERQLAELP---------------R---A----ETARQAL-------------- 302 (434)
T ss_dssp TT-----CEEEEEESCHHHHHHHHHHHHHHHTTCT---------------T---H----HHHHHHH--------------
T ss_pred CC-----CcEEEEECCHHHHHHHHHHHHHHHHhCC---------------h---H----HHHHHHH--------------
Confidence 32 334566555 23444444444444321 1 1 1111111
Q ss_pred CCCceeeeEEEEeCCCCCcccccccccceEEEeeeCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHHhccc-eeEEEEC
Q 015031 289 KKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSIR-AGIIWIN 367 (414)
Q Consensus 289 ~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~sv~s~d~~~~~~~~~~l~-~g~v~vN 367 (414)
..- .++.++|++||++++|..- .=..-|.++|+ ..++.+++ +|.|++.
T Consensus 303 --------------------------~~~-~ii~v~~l~ea~~~~N~~A-PEHLel~~~dp---~~~l~~I~nAGaIFlG 351 (434)
T 1kae_A 303 --------------------------NAS-RLIVTKDLAQCVEISNQYG-PEHLIIQTRNA---RELVDSITSAGSVFLG 351 (434)
T ss_dssp --------------------------TTC-EEEECSSHHHHHHHHHHHC-CSEEEEESTTH---HHHGGGCCSCSEEEES
T ss_pred --------------------------HcC-eEEEECCHHHHHHHHHHhh-hHhhhhhhcCH---HHHHhhcCcccchhcC
Confidence 112 4567899999999999742 23567888886 45777776 8999999
Q ss_pred CcCC---------CCCCCCccCCCCCCCCCcchHHHHHhhhcccEEE
Q 015031 368 CYFA---------FDSDCPYGGYKMSGFGRDCGLESLHNYLQVKSVV 405 (414)
Q Consensus 368 ~~~~---------~~~~~pfgG~~~sG~g~~~g~~~~~~~~~~k~i~ 405 (414)
.++. .++-+|-+| ..++.+.-+...|+++.++.
T Consensus 352 ~~tpe~~GDY~aG~NHvLPT~G-----~AR~~sgLsV~~F~K~~s~~ 393 (434)
T 1kae_A 352 DWSPESAGDYASGTNHVLPTYG-----YTATCSSLGLADFQKRMTVQ 393 (434)
T ss_dssp TTCCHHHHHHTSSSCCCCCCTT-----GGGTCCCSCGGGGEEEEEEE
T ss_pred CCCchhhcccccCCCcccCCCC-----ceeccCCCcHHhccceeeEE
Confidence 7643 345666654 45555666778888876653
|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| 414 | ||||
| d1bxsa_ | 494 | c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), | 1e-157 | |
| d1o04a_ | 494 | c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), | 1e-155 | |
| d1a4sa_ | 503 | c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), | 1e-129 | |
| d1wnda_ | 474 | c.82.1.1 (A:) Putative betaine aldehyde dehydrogen | 1e-113 | |
| d1uzba_ | 516 | c.82.1.1 (A:) 1-pyrroline-5-carboxylate dehydrogen | 2e-91 | |
| d1euha_ | 474 | c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), | 2e-90 | |
| d1ad3a_ | 446 | c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), | 7e-87 | |
| d1ky8a_ | 499 | c.82.1.1 (A:) Non-phosphorylating glyceraldehyde-3 | 2e-77 | |
| d1o20a_ | 414 | c.82.1.1 (A:) Gamma-glutamyl phosphate reductase { | 3e-41 | |
| d1ez0a_ | 504 | c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), | 1e-37 | |
| d1vlua_ | 436 | c.82.1.1 (A:) Gamma-glutamyl phosphate reductase { | 1e-17 |
| >d1bxsa_ c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), ALDH {Sheep (Ovis aries) [TaxId: 9940]} Length = 494 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: Aldehyde reductase (dehydrogenase), ALDH species: Sheep (Ovis aries) [TaxId: 9940]
Score = 451 bits (1160), Expect = e-157
Identities = 222/405 (54%), Positives = 299/405 (73%)
Query: 1 MLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMS 60
+ K ADLIE +LA +EA++ GKL S A + D+ G TLRY AG ADKI G + M
Sbjct: 82 LNKLADLIERDRLLLATMEAMNGGKLFSNAYLMDLGGCIKTLRYCAGWADKIQGRTIPMD 141
Query: 61 RALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHL 120
YT EP+GV G IIPWNFP MF K+ PAL+ G T++VKPAEQTPL AL+ L
Sbjct: 142 GNFFTYTRSEPVGVCGQIIPWNFPLLMFLWKIGPALSCGNTVVVKPAEQTPLTALHMGSL 201
Query: 121 AKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSL 180
K AG P GV+N+VPG+GPTAGAAI+SHMD+DKV+FTGST+VG+ + +AA SNLK VSL
Sbjct: 202 IKEAGFPPGVVNIVPGYGPTAGAAISSHMDVDKVAFTGSTEVGKLIKEAAGKSNLKRVSL 261
Query: 181 ELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAK 240
ELGGKSP ++F D D++ A + A G+ +++G+ C+A+SR++V+E IYDEF ++ VE+AK
Sbjct: 262 ELGGKSPCIVFADADLDNAVEFAHQGVFYHQGQCCIAASRLFVEESIYDEFVRRSVERAK 321
Query: 241 AWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIGKKGYYIEPTIFT 300
+V+G+P P V QGPQ+DK+Q+++IL IE GK+EGA L GG P G KGY+I+PT+F+
Sbjct: 322 KYVLGNPLTPGVSQGPQIDKEQYEKILDLIESGKKEGAKLECGGGPWGNKGYFIQPTVFS 381
Query: 301 NVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSIR 360
+VT+DM IAK EIFGPV +MKFK++++ IK ANNT YGL+AGI T D++ A TVS +++
Sbjct: 382 DVTDDMRIAKEEIFGPVQQIMKFKSLDDVIKRANNTFYGLSAGIFTNDIDKAITVSSALQ 441
Query: 361 AGIIWINCYFAFDSDCPYGGYKMSGFGRDCGLESLHNYLQVKSVV 405
+G +W+NCY + CP+GG+KMSG GR+ G H Y +VK+V
Sbjct: 442 SGTVWVNCYSVVSAQCPFGGFKMSGNGRELGEYGFHEYTEVKTVT 486
|
| >d1o04a_ c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), ALDH {Human (Homo sapiens), mitochondrial [TaxId: 9606]} Length = 494 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: Aldehyde reductase (dehydrogenase), ALDH species: Human (Homo sapiens), mitochondrial [TaxId: 9606]
Score = 446 bits (1148), Expect = e-155
Identities = 220/413 (53%), Positives = 285/413 (69%), Gaps = 2/413 (0%)
Query: 1 MLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMS 60
+ + ADLIE LA LE LD GK + + + D+ LRYYAG ADK HG+ + +
Sbjct: 82 LNRLADLIERDRTYLAALETLDNGKPYVISYLVDLDMVLKCLRYYAGWADKYHGKTIPID 141
Query: 61 RALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHL 120
YT EP+GV G IIPWNFP M K+ PALA G +++K AEQTPL ALY A+L
Sbjct: 142 GDFFSYTRHEPVGVCGQIIPWNFPLLMQAWKLGPALATGNVVVMKVAEQTPLTALYVANL 201
Query: 121 AKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSL 180
K AG P GV+N+VPGFGPTAGAAIASH D+DKV+FTGST++GR + AA +SNLK V+L
Sbjct: 202 IKEAGFPPGVVNIVPGFGPTAGAAIASHEDVDKVAFTGSTEIGRVIQVAAGSSNLKRVTL 261
Query: 181 ELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAK 240
ELGGKSP +I D D++ A + A + FN+G+ A SR +VQE IYDEF ++ V +AK
Sbjct: 262 ELGGKSPNIIMSDADMDWAVEQAHFALFFNQGQCSCAGSRTFVQEDIYDEFVERSVARAK 321
Query: 241 AWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIGKKGYYIEPTIFT 300
+ VVG+PFD QGPQVD+ QF +IL YI GK+EGA LL GG +GY+I+PT+F
Sbjct: 322 SRVVGNPFDSKTEQGPQVDETQFKKILGYINTGKQEGAKLLCGGGIAADRGYFIQPTVFG 381
Query: 301 NVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSIR 360
+V + M IAK EIFGPVM ++KFKT+EE + ANN+ YGLAA + TKDL+ AN +S++++
Sbjct: 382 DVQDGMTIAKEEIFGPVMQILKFKTIEEVVGRANNSTYGLAAAVFTKDLDKANYLSQALQ 441
Query: 361 AGIIWINCYFAFDSDCPYGGYKMSGFGRDCGLESLHNYLQVKSVV--TPIFNS 411
AG +W+NCY F + P+GGYKMSG GR+ G L Y +VK+V P NS
Sbjct: 442 AGTVWVNCYDVFGAQSPFGGYKMSGSGRELGEYGLQAYTEVKTVTVKVPQKNS 494
|
| >d1a4sa_ c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), ALDH {Baltic cod (Gadus callarias) [TaxId: 8053]} Length = 503 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: Aldehyde reductase (dehydrogenase), ALDH species: Baltic cod (Gadus callarias) [TaxId: 8053]
Score = 378 bits (972), Expect = e-129
Identities = 165/421 (39%), Positives = 255/421 (60%), Gaps = 11/421 (2%)
Query: 1 MLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMS 60
ML+ A +I E + +A LE ++ GK + DI A + YYAG A + G+ +++
Sbjct: 86 MLEAARIIRERRDNIAKLEVINNGKTITE-AEYDIDAAWQCIEYYAGLAPTLSGQHIQLP 144
Query: 61 RALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHL 120
YT REP+GV I+ WN+P + K +PALA G ++ KP+ TP+ + A +
Sbjct: 145 GGAFAYTRREPLGVCAGILAWNYPFMIAAWKCAPALACGNAVVFKPSPMTPVTGVILAEI 204
Query: 121 AKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSL 180
AGVP G++NVV G G G+ + H ++ KVSFTGS G++VM+ +A +K V+L
Sbjct: 205 FHEAGVPVGLVNVVQG-GAETGSLLCHHPNVAKVSFTGSVPTGKKVMEMSA-KTVKHVTL 262
Query: 181 ELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAK 240
ELGGKSPLLIF D ++ A AL+ +G++C +RV+VQ I +F +++V++ K
Sbjct: 263 ELGGKSPLLIFKDCELENAVRGALMANFLTQGQVCTNGTRVFVQREIMPQFLEEVVKRTK 322
Query: 241 AWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIG------KKGYYI 294
A VVGDP R G + K Q D++L ++ K+EGA +L GG+P+ K GY++
Sbjct: 323 AIVVGDPLLTETRMGGLISKPQLDKVLGFVAQAKKEGARVLCGGEPLTPSDPKLKNGYFM 382
Query: 295 EPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANT 354
P + N +DM K EIFGPVM+++ F T EE ++ ANNT +GLA+G+ T+D++ A+
Sbjct: 383 SPCVLDNCRDDMTCVKEEIFGPVMSVLPFDTEEEVLQRANNTTFGLASGVFTRDISRAHR 442
Query: 355 VSRSIRAGIIWINCYFAFDSDCPYGGYKMSGFGRDCGLESLHNYLQVKSVVTPI--FNSP 412
V+ ++ AG +IN Y + P+GGYKMSGFGR+ G ++ Y Q+K+V+ + +S
Sbjct: 443 VAANLEAGTCYINTYSISPVEVPFGGYKMSGFGRENGQATVDYYSQLKTVIVEMGDVDSL 502
Query: 413 W 413
+
Sbjct: 503 F 503
|
| >d1wnda_ c.82.1.1 (A:) Putative betaine aldehyde dehydrogenase YdcW {Escherichia coli [TaxId: 562]} Length = 474 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: Putative betaine aldehyde dehydrogenase YdcW species: Escherichia coli [TaxId: 562]
Score = 337 bits (866), Expect = e-113
Identities = 143/407 (35%), Positives = 217/407 (53%), Gaps = 4/407 (0%)
Query: 1 MLKFADLIEEHAEVLAVLEALDAGK-LHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKM 59
+LK AD+IEE+ +V A LE+ + GK LHS + A +
Sbjct: 67 LLKLADVIEENGQVFAELESRNCGKPLHSAFNDEIPAIVDVFRFFAGAARCLNGLAAGEY 126
Query: 60 SRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAH 119
R+P+GVV I PWN+P M K++PALAAG +++KP+E TPL AL A
Sbjct: 127 LEGHTSMIRRDPLGVVASIAPWNYPLMMAAWKLAPALAAGNCVVLKPSEITPLTALKLAE 186
Query: 120 LAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVS 179
LAK P GV+N++ G G T G + H + VS TGS G ++ S++K
Sbjct: 187 LAK-DIFPAGVVNILFGRGKTVGDPLTGHPKVRMVSLTGSIATGEHIISHT-ASSIKRTH 244
Query: 180 LELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKA 239
+ELGGK+P+++FDD D+ + +N G+ C A+ R+Y Q+GIYD +KL
Sbjct: 245 MELGGKAPVIVFDDADIEAVVEGVRTFGYYNAGQDCTAACRIYAQKGIYDTLVEKLGAAV 304
Query: 240 KAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGAT-LLTGGKPIGKKGYYIEPTI 298
G P D + GP +R+ +E K G ++TGG+ GYY PT+
Sbjct: 305 ATLKSGAPDDESTELGPLSSLAHLERVGKAVEEAKATGHIKVITGGEKRKGNGYYYAPTL 364
Query: 299 FTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRS 358
+D I + E+FGPV+++ F E+ + AN+++YGLA+ + TKD+ A+ VS
Sbjct: 365 LAGALQDDAIVQKEVFGPVVSVTPFDNEEQVVNWANDSQYGLASSVWTKDVGRAHRVSAR 424
Query: 359 IRAGIIWINCYFAFDSDCPYGGYKMSGFGRDCGLESLHNYLQVKSVV 405
++ G W+N +F S+ P+GG K+SG+G+D L L +Y V+ V+
Sbjct: 425 LQYGCTWVNTHFMLVSEMPHGGQKLSGYGKDMSLYGLEDYTVVRHVM 471
|
| >d1uzba_ c.82.1.1 (A:) 1-pyrroline-5-carboxylate dehydrogenase {Thermus thermophilus [TaxId: 274]} Length = 516 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: 1-pyrroline-5-carboxylate dehydrogenase species: Thermus thermophilus [TaxId: 274]
Score = 283 bits (724), Expect = 2e-91
Identities = 130/414 (31%), Positives = 212/414 (51%), Gaps = 13/414 (3%)
Query: 1 MLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAAD--KIHGEVLK 58
+LK A L+ L + GK D+ A + + YYA AA + +
Sbjct: 102 LLKAAALMRRRKRELEATLVYEVGKNWVE-ASADVAEAIDFIEYYARAALRYRYPAVEVV 160
Query: 59 MSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFA 118
+ P+G I PWNFP +F + +A G T+I KPAE ++
Sbjct: 161 PYPGEDNESFYVPLGAGVVIAPWNFPVAIFTGMIVGPVAVGNTVIAKPAEDAVVVGAKVF 220
Query: 119 HLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAA-----TS 173
+ AG P GV+N +PG G GA + H I ++FTGS +VG ++ +AA +
Sbjct: 221 EIFHEAGFPPGVVNFLPGVGEEVGAYLVEHPRIRFINFTGSLEVGLKIYEAAGRLAPGQT 280
Query: 174 NLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEK 233
K +E GGK+ +++ + D + AA+ ++ +G+ C A+SR+ + +G Y+ +
Sbjct: 281 WFKRAYVETGGKNAIIVDETADFDLAAEGVVVSAYGFQGQKCSAASRLILTQGAYEPVLE 340
Query: 234 KLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIGKKGYY 293
+++++A+ VG P + GP V +Q ++LSYIE GK EG +L GGK + +GY+
Sbjct: 341 RVLKRAERLSVG-PAEENPDLGPVVSAEQERKVLSYIEIGKNEGQLVL-GGKRLEGEGYF 398
Query: 294 IEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVAN 353
I PT+FT V IA+ EIFGPV+++++ K EA++ AN+T YGL G+ ++
Sbjct: 399 IAPTVFTEVPPKARIAQEEIFGPVLSVIRVKDFAEALEVANDTPYGLTGGVYSRKREHLE 458
Query: 354 TVSRSIRAGIIWIN--CYFAFDSDCPYGGYKMSGFGRDCG-LESLHNYLQVKSV 404
R G ++ N A P+GG+K+SG G L+ L +L++K+V
Sbjct: 459 WARREFHVGNLYFNRKITGALVGVQPFGGFKLSGTNAKTGALDYLRLFLEMKAV 512
|
| >d1euha_ c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), ALDH {Streptococcus mutans [TaxId: 1309]} Length = 474 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: Aldehyde reductase (dehydrogenase), ALDH species: Streptococcus mutans [TaxId: 1309]
Score = 279 bits (714), Expect = 2e-90
Identities = 129/411 (31%), Positives = 195/411 (47%), Gaps = 13/411 (3%)
Query: 1 MLKFADLIEEHAEVLAVLEALDAGK-----LHSWAKMGDIPGAANTLRYYAGAADKIHGE 55
+ K AD++ E + + + + K + + +I A G
Sbjct: 67 LHKVADILMRDKEKIGAILSKEVAKGYKSAVSEVVRTAEIINYAAEEGLRMEGEVLEGGS 126
Query: 56 VLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIAL 115
S+ REP+G+V I P+N+P + K++PAL AG + KP Q + L
Sbjct: 127 FEAASKKKIAVVRREPVGLVLAISPFNYPVNLAGSKIAPALIAGNVIAFKPPTQGSISGL 186
Query: 116 YFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNL 175
A AG+P GV N + G G G I H ++ ++FTGST +G ++ + A +
Sbjct: 187 LLAEAFAEAGLPAGVFNTITGRGSEIGDYIVEHQAVNFINFTGSTGIGERIGKMAG---M 243
Query: 176 KPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKL 235
+P+ LELGGK ++ +D D+ A + G G+ C A RV V E + DE +K+
Sbjct: 244 RPIMLELGGKDSAIVLEDADLELTAKNIIAGAFGYSGQRCTAVKRVLVMESVADELVEKI 303
Query: 236 VEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIGKKGYYIE 295
EK A +G+P D A P +D K D + I +GAT LT K ++G I
Sbjct: 304 REKVLALTIGNPEDDADIT-PLIDTKSADYVEGLINDANDKGATALTEIK---REGNLIC 359
Query: 296 PTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTV 355
P +F VT DM +A E FGPV+ +++ +VEEAI+ +N + YGL A I T D A +
Sbjct: 360 PILFDKVTTDMRLAWEEPFGPVLPIIRVTSVEEAIEISNKSEYGLQASIFTNDFPRAFGI 419
Query: 356 SRSIRAGIIWINCYFAF-DSDCPYGGYKMSGFGRDCGLESLHNYLQVKSVV 405
+ + G + IN + P+ G K SG G S+ VKSVV
Sbjct: 420 AEQLEVGTVHINNKTQRGTDNFPFLGAKKSGAGIQGVKYSIEAMTTVKSVV 470
|
| >d1ad3a_ c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), ALDH {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 446 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: Aldehyde reductase (dehydrogenase), ALDH species: Rat (Rattus norvegicus) [TaxId: 10116]
Score = 269 bits (688), Expect = 7e-87
Identities = 106/411 (25%), Positives = 170/411 (41%), Gaps = 17/411 (4%)
Query: 1 MLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKI-HGEVLKM 59
+ +I E+ + ++ A D GK + ++ L E +
Sbjct: 28 LEALQRMINENLKSISGALASDLGKNEWTSYYEEVAHVLEELDTTIKELPDWAEDEPVAK 87
Query: 60 SRALQG---YTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALY 116
+R Q Y EP+GVV I WN+P + + A+AAG +I+KP+E + +A
Sbjct: 88 TRQTQQDDLYIHSEPLGVVLVIGAWNYPFNLTIQPMVGAVAAGNAVILKPSEVSGHMADL 147
Query: 117 FAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLK 176
A L + G D + +TGST VG+ VM AAA +L
Sbjct: 148 LATLIP---QYMDQNLYLVVKGGVPETTELLKERFDHIMYTGSTAVGKIVMAAAA-KHLT 203
Query: 177 PVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLV 236
PV+LELGGKSP + D D++ A G N G+ CVA + I ++ +KL
Sbjct: 204 PVTLELGGKSPCYVDKDCDLDVACRRIAWGKFMNSGQTCVAPDYILCDPSIQNQIVEKLK 263
Query: 237 EKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIGKKGYYIEP 296
+ K G+ + G ++ + F R+ I++ K YI P
Sbjct: 264 KSLK-DFYGEDAKQSRDYGRIINDRHFQRVKGLIDNQKVAHGGTWDQS------SRYIAP 316
Query: 297 TIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVS 356
TI +V + + EIFGPVM ++ +++EEAI+ N LA + + + V +
Sbjct: 317 TILVDVDPQSPVMQEEIFGPVMPIVCVRSLEEAIQFINQREKPLALYVFSNNEKVIKKMI 376
Query: 357 RSIRAGIIWIN--CYFAFDSDCPYGGYKMSGFGRDCGLESLHNYLQVKSVV 405
+G + N P+GG SG G G +S + +S +
Sbjct: 377 AETSSGGVTANDVIVHITVPTLPFGGVGNSGMGAYHGKKSFETFSHRRSCL 427
|
| >d1ky8a_ c.82.1.1 (A:) Non-phosphorylating glyceraldehyde-3-phosphate dehydrogenase GapN {Archaeon Thermoproteus tenax [TaxId: 2271]} Length = 499 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: Non-phosphorylating glyceraldehyde-3-phosphate dehydrogenase GapN species: Archaeon Thermoproteus tenax [TaxId: 2271]
Score = 246 bits (629), Expect = 2e-77
Identities = 120/412 (29%), Positives = 201/412 (48%), Gaps = 12/412 (2%)
Query: 1 MLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKM- 59
+ K AD+IE + +V A + ++AGK S A +G++ A + LR KI G+ +
Sbjct: 81 LRKAADIIERNLDVFAEVLVMNAGKPKSAA-VGEVKAAVDRLRLAELDLKKIGGDYIPGD 139
Query: 60 ----SRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIAL 115
+ +G REP+GVV I P+N+P K++ + G ++VKP+ PL A
Sbjct: 140 WTYDTLETEGLVRREPLGVVAAITPFNYPLFDAVNKITYSFIYGNAVVVKPSISDPLPAA 199
Query: 116 YFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNL 175
AG P + ++ G A +A + VSFTGST+VG +V++ +
Sbjct: 200 MAVKALLDAGFPPDAIALLNLPGKEAEKIVA-DDRVAAVSFTGSTEVGERVVKVGG---V 255
Query: 176 KPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKL 235
K +ELGG P ++ +D D++ AAD GI G+ C A V + +Y + +++
Sbjct: 256 KQYVMELGGGDPAIVLEDADLDLAADKIARGIYSYAGQRCDAIKLVLAERPVYGKLVEEV 315
Query: 236 VEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIGKKGYYIE 295
++ + VGDP DP V GP + D +++ IE +G +L GG+ +G
Sbjct: 316 AKRLSSLRVGDPRDPTVDVGPLISPSAVDEMMAAIEDAVEKGGRVLAGGRRLGPTYVQPT 375
Query: 296 P-TIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANT 354
+ +DM++ K E+F PV + ++ K +++AI+ AN YGL A + +D+
Sbjct: 376 LVEAPADRVKDMVLYKREVFAPVASAVEVKDLDQAIELANGRPYGLDAAVFGRDVVKIRR 435
Query: 355 VSRSIRAGIIWINCYFAFDSD-CPYGGYKMSGFGRDCGLESLHNYLQVKSVV 405
R + G I+IN P+GG K SG R+ ++ K++V
Sbjct: 436 AVRLLEVGAIYINDMPRHGIGYYPFGGRKKSGVFREGIGYAVEAVTAYKTIV 487
|
| >d1o20a_ c.82.1.1 (A:) Gamma-glutamyl phosphate reductase {Thermotoga maritima [TaxId: 2336]} Length = 414 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: Gamma-glutamyl phosphate reductase species: Thermotoga maritima [TaxId: 2336]
Score = 149 bits (375), Expect = 3e-41
Identities = 58/421 (13%), Positives = 115/421 (27%), Gaps = 59/421 (14%)
Query: 1 MLKFADLIEEHAEVLAVLEALDAGKLHSWAK-----------MGDIPGAANTLRYYAGAA 49
+ K A+ ++E + + +D K I G
Sbjct: 29 IKKIAEKLDERRKEILEANRIDVEKARERGVKESLVDRLALNDKRIDEMIKACETVIGLK 88
Query: 50 DKIHGEVLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQ 109
D + + R R + + I + + AL +G T++++
Sbjct: 89 DPVGEVIDSWVREDGLRIARVRVPIGPIGIIYESRPNVTVETTILALKSGNTILLRGGSD 148
Query: 110 TPLIALYFAHLAKLAGVPDGVLNVVPGF-GPTAGAAIASHMDIDKVSFTGSTDVGRQVMQ 168
+ A + F T + + + + + G ++
Sbjct: 149 ALNSNKAIVSAIREALKETEIPESSVEFIENTDRSLVLEMIRLREYLSLVIPRGGYGLIS 208
Query: 169 AAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIY 228
+ PV G + + + D+ A + + G A + ++ I
Sbjct: 209 FVRDNATVPVLETGVGNCHIFVDESADLKKAVPVIINAKTQRPGTCNAAEKLLVHEK-IA 267
Query: 229 DEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIG 288
EF +VE+ + V R+
Sbjct: 268 KEFLPVIVEELRKHGVEVRGCEKTRE---------------------------------- 293
Query: 289 KKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKD 348
I P + +D E ++A+ K V+EAI+ G + I+T++
Sbjct: 294 -----IVPDVVPATEDDW---PTEYLDLIIAIKVVKNVDEAIEHIKKYSTGHSESILTEN 345
Query: 349 LNVANTVSRSIRAGIIWINCYFAFDSDCPYGGYKMSGFGRD----CGLESLHNYLQVKSV 404
+ A I A +++N F +G G G L K V
Sbjct: 346 YSNAKKFVSEIDAAAVYVNASTRFTDGGQFGFGAEIGISTQRFHARGPVGLRELTTYKFV 405
Query: 405 V 405
V
Sbjct: 406 V 406
|
| >d1ez0a_ c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), ALDH {Vibrio harveyi [TaxId: 669]} Length = 504 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: Aldehyde reductase (dehydrogenase), ALDH species: Vibrio harveyi [TaxId: 669]
Score = 140 bits (353), Expect = 1e-37
Identities = 71/433 (16%), Positives = 126/433 (29%), Gaps = 40/433 (9%)
Query: 1 MLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKM- 59
+ A +E ++ + L+ G+I AN LR +A + +
Sbjct: 54 LRTIASELEARSDDIIARAHLETALPEVRLT-GEIARTANQLRLFADVVNSGSYHQAILD 112
Query: 60 --------SRALQGYTLREPIGVVGHIIPWNFPTT--MFFMKVSPALAAGCTMIVKPAEQ 109
+ +G V NFP + ALAAGC +IVK
Sbjct: 113 TPNPTRAPLPKPDIRRQQIALGPVAVFGASNFPLAFSAAGGDTASALAAGCPVIVKGHTA 172
Query: 110 TPLIALYFAHLAKLAG----VPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQ 165
P + A + A +P + ++ G G A+ SH +I V FTGS GR
Sbjct: 173 HPGTSQIVAECIEQALKQEQLPQAIFTLLQGNQRALGQALVSHPEIKAVGFTGSVGGGRA 232
Query: 166 VMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMAL---LGILFNKGEICVASSRVY 222
+ A G + AD+A + G+ C V+
Sbjct: 233 LFNLAHERPEPIPFYGELGAINPTFIFPSAMRAKADLADQFVASMTMGCGQFCTKPGVVF 292
Query: 223 VQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLT 282
+ + + + + I+
Sbjct: 293 ALNTPETQAFIETAQSLIRQQSPSTLLTPGIRDSYQSQVVSRGSDDGIDVTFS------- 345
Query: 283 GGKPIGKKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAA 342
+ + + EIFGP ++ + V + + + L A
Sbjct: 346 --QAESPCVASALFVTSSENWRKHPAWEEEIFGPQSLIVVCENVADMLSLSEMLAGSLTA 403
Query: 343 GIMT--KDLNVANTVSRSIR--AGIIWINCY-------FAFDSDCPYGGYKMSGFGRDCG 391
I +D + + + AG + N + +A PY S G
Sbjct: 404 TIHATEEDYPQVSQLIPRLEEIAGRLVFNGWPTGVEVGYAMVHGGPYPASTHSASTS-VG 462
Query: 392 LESLHNYLQVKSV 404
E++H +L+ +
Sbjct: 463 AEAIHRWLRPVAY 475
|
| >d1vlua_ c.82.1.1 (A:) Gamma-glutamyl phosphate reductase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 436 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: Gamma-glutamyl phosphate reductase species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 82.2 bits (202), Expect = 1e-17
Identities = 49/398 (12%), Positives = 113/398 (28%), Gaps = 51/398 (12%)
Query: 1 MLKFADLIEEHAEVLAVLEALD---AGKLHSWAKMGD---------IPGAANTLRYYAGA 48
+ K D ++ +A + +D A + + ++ A
Sbjct: 31 LYKIHDALKANAHAIEEANKIDLAVAKETGLADSLLKRLDLFKGDKFEVMLQGIKDVAEL 90
Query: 49 ADKIHGEVLKMSRALQGYTLRE-PIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPA 107
D + G+V G TL + V ++ + + + ++ +G I+K
Sbjct: 91 EDPV-GKVKMARELDDGLTLYQVTAPVGVLLVIFESRPEVIANITALSIKSGNAAILKGG 149
Query: 108 EQTPLIALYFAHLAK------LAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTD 161
+++ A + + V +V + + + +
Sbjct: 150 KESVNTFREMAKIVNDTIAQFQSETGVPVGSVQLIETRQDVSDLLDQDEYIDLVVPRG-- 207
Query: 162 VGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRV 221
+++ + PV G + + +D D+ A ++L + +
Sbjct: 208 -SNALVRKIKDTTKIPVLGHADGICSIYLDEDADLIKAKRISLDAKTNYPAGCNAMETLL 266
Query: 222 YVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLL 281
+E + V + + FD++ E GK A
Sbjct: 267 IN-PKFSKWWEVLENLTLEGGV-------TIHATKDLKTAYFDKL---NELGKLTEA--- 312
Query: 282 TGGKPIGKKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLA 341
T+ + +D E +A + E AI+ N
Sbjct: 313 -----------IQCKTVDADEEQDF---DKEFLSLDLAAKFVTSTESAIQHINTHSSRHT 358
Query: 342 AGIMTKDLNVANTVSRSIRAGIIWINCYFAFDSDCPYG 379
I+T++ A + + + ++ N F YG
Sbjct: 359 DAIVTENKANAEKFMKGVDSSGVYWNASTRFADGFRYG 396
|
Homologous Domains Detected by HHsearch 
Original result of HHsearch against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 414 | |||
| d1bxsa_ | 494 | Aldehyde reductase (dehydrogenase), ALDH {Sheep (O | 100.0 | |
| d1o04a_ | 494 | Aldehyde reductase (dehydrogenase), ALDH {Human (H | 100.0 | |
| d1a4sa_ | 503 | Aldehyde reductase (dehydrogenase), ALDH {Baltic c | 100.0 | |
| d1wnda_ | 474 | Putative betaine aldehyde dehydrogenase YdcW {Esch | 100.0 | |
| d1uzba_ | 516 | 1-pyrroline-5-carboxylate dehydrogenase {Thermus t | 100.0 | |
| d1ad3a_ | 446 | Aldehyde reductase (dehydrogenase), ALDH {Rat (Rat | 100.0 | |
| d1ky8a_ | 499 | Non-phosphorylating glyceraldehyde-3-phosphate deh | 100.0 | |
| d1euha_ | 474 | Aldehyde reductase (dehydrogenase), ALDH {Streptoc | 100.0 | |
| d1ez0a_ | 504 | Aldehyde reductase (dehydrogenase), ALDH {Vibrio h | 100.0 | |
| d1o20a_ | 414 | Gamma-glutamyl phosphate reductase {Thermotoga mar | 100.0 | |
| d1vlua_ | 436 | Gamma-glutamyl phosphate reductase {Baker's yeast | 100.0 | |
| d1k75a_ | 431 | L-histidinol dehydrogenase HisD {Escherichia coli | 97.67 |
| >d1bxsa_ c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), ALDH {Sheep (Ovis aries) [TaxId: 9940]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: Aldehyde reductase (dehydrogenase), ALDH species: Sheep (Ovis aries) [TaxId: 9940]
Probab=100.00 E-value=2.6e-92 Score=718.71 Aligned_cols=410 Identities=54% Similarity=0.957 Sum_probs=394.0
Q ss_pred CHHHHHHHHHhHHHHHHHHHHHcCCChHHHhhccHHHHHHHHHHHHHhhhhhcCceeccccCccccccccCCcEEEEEcC
Q 015031 1 MLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMSRALQGYTLREPIGVVGHIIP 80 (414)
Q Consensus 1 L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p 80 (414)
|+++++.|++|+++|++++++|+|||..+....|+..+++.+++++.+.++..+...+...+...+++++|+|||++|+|
T Consensus 82 L~kia~~L~~~~eela~l~~~E~Gk~~~e~~~~ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~P 161 (494)
T d1bxsa_ 82 LNKLADLIERDRLLLATMEAMNGGKLFSNAYLMDLGGCIKTLRYCAGWADKIQGRTIPMDGNFFTYTRSEPVGVCGQIIP 161 (494)
T ss_dssp HHHHHHHHHHTHHHHHHHHHHHHTCCHHHHHHTHHHHHHHHHHHHHHHGGGCCEEEECCSSSEEEEEEEEECCEEEEECC
T ss_pred HHHHHHHHHhCHHHHHHHHHHhcCCchhhhhhhhhhhhhHHHHHHhhhhhhhcceeecCCCCceeEEEEccEEEEEEEeC
Confidence 57899999999999999999999999998667899999999999999988877776666667788899999999999999
Q ss_pred CCcChHhhHHHHHHHHhcCCeEEEecCCCChhHHHHHHHHHHHcCCCCCeEEEEcCCchhHHHHHHhCCCcCeEEEeCCH
Q 015031 81 WNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGST 160 (414)
Q Consensus 81 ~n~P~~~~~~~~~~ALaaGN~vv~kps~~~~~~~~~l~~~~~~aglp~g~v~~~~~~~~~~~~~l~~~~~~~~v~~tGs~ 160 (414)
||||+...++++++||++||+||+|||+.+|.++..+.+++.++|+|+|++|+++|++.++++.|+.||+++.|.||||+
T Consensus 162 wN~P~~~~~~~i~~ALaaGN~VVlKpse~tp~~a~~l~~~~~~aglP~gv~~~v~g~~~~~~~~l~~~p~v~~i~fTGS~ 241 (494)
T d1bxsa_ 162 WNFPLLMFLWKIGPALSCGNTVVVKPAEQTPLTALHMGSLIKEAGFPPGVVNIVPGYGPTAGAAISSHMDVDKVAFTGST 241 (494)
T ss_dssp SSSHHHHHHHHHHHHHHTTCEEEEECCTTCCHHHHHHHHHHHHHTCCTTSEEECCSCTTTHHHHHHTCTTCSEEEEESCH
T ss_pred ccchhHHHHHHHHHHHHcCCeEEEECCCCChHHHHHHHHHHHHhCCCcCeEEEEeCCchHHHHHHHhCCCcCEEEecCCH
Confidence 99999999999999999999999999999999999999999999999999999999888899999999999999999999
Q ss_pred HHHHHHHHHHhhCCCCceeeeCCCCCceeecCCCCHHHHHHHHHHHHhcccCCccccCcEEEEeCccHHHHHHHHHHHHh
Q 015031 161 DVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAK 240 (414)
Q Consensus 161 ~~~~~i~~~~~~~~~~~~~~e~gG~~~~iV~~dadl~~a~~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f~~~l~~~~~ 240 (414)
.+|+.|.+.++..+++|+++|+||+||+||++|||++.|++.+++++|+|+||.|++++|||||++++|+|+++|+++++
T Consensus 242 ~~g~~i~~~aa~~~~~~~~lElGG~np~iV~~dadl~~a~~~i~~~~~~~~GQ~C~a~~rv~V~~~~~d~f~~~l~~~~~ 321 (494)
T d1bxsa_ 242 EVGKLIKEAAGKSNLKRVSLELGGKSPCIVFADADLDNAVEFAHQGVFYHQGQCCIAASRLFVEESIYDEFVRRSVERAK 321 (494)
T ss_dssp HHHHHHHHHHHHTTCCEEEEECCCCCEEEECTTSCHHHHHHHHHHHHHTTTTCCTTCCCEEEEEHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHhcccCCCeEEEEcCCcCcEEECcCcchhHhHHHHHHHHhcCCCcccccceEEecccchhHHHHHHHHhhhh
Confidence 99999999887567899999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccCCCCCCCCCccccCCHHHHHHHHHHHHHhhhcCCeEeeCCcccCCCCceeeeEEEEeCCCCCcccccccccceEEE
Q 015031 241 AWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIGKKGYYIEPTIFTNVTEDMLIAKNEIFGPVMAL 320 (414)
Q Consensus 241 ~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v 320 (414)
++++|+|.++++++||++++.+++++++++++++++|+++++||....+.|+|++|||+.+++++|++++||+||||++|
T Consensus 322 ~~~~g~~~~~~~~~gpli~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~FGPvl~v 401 (494)
T d1bxsa_ 322 KYVLGNPLTPGVSQGPQIDKEQYEKILDLIESGKKEGAKLECGGGPWGNKGYFIQPTVFSDVTDDMRIAKEEIFGPVQQI 401 (494)
T ss_dssp CCCBSCTTSTTCCBCCCSCHHHHHHHHHHHHHHHHTTCEECSCCSEECSSSCEECCEEEESCCTTSHHHHSCCCSSEEEE
T ss_pred heeeeccCCCCCcCCCcCCHHHHHHHHHHHHHHHHcCCEEEeCCCccCCCceeEcCEEEeCCCCCcHHHhccccCceEEE
Confidence 99999999999999999999999999999999999999999999887778999999999999999999999999999999
Q ss_pred eeeCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHHhccceeEEEECCcCCCCCCCCccCCCCCCCCCcchHHHHHhhhc
Q 015031 321 MKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSIRAGIIWINCYFAFDSDCPYGGYKMSGFGRDCGLESLHNYLQ 400 (414)
Q Consensus 321 ~~~~~~~eai~~~n~~~~gl~~sv~s~d~~~~~~~~~~l~~g~v~vN~~~~~~~~~pfgG~~~sG~g~~~g~~~~~~~~~ 400 (414)
++|+|.||||+++|+++|||++||||+|.+.++++++++++|+|+||++....+.+||||+|.||+|+++|.+|+++||+
T Consensus 402 ~~~~~~~eai~~~n~~~~gL~a~i~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~PfGG~~~SG~G~~~g~~~~~~ft~ 481 (494)
T d1bxsa_ 402 MKFKSLDDVIKRANNTFYGLSAGIFTNDIDKAITVSSALQSGTVWVNCYSVVSAQCPFGGFKMSGNGRELGEYGFHEYTE 481 (494)
T ss_dssp EEECCHHHHHHHHHCSSCCSEEEEECSBHHHHHHHHHHSCCSEEEESCCCCCCTTSCBCCSGGGEESCBSHHHHHHTTEE
T ss_pred EEECCHHHHHHHHhCCCCCCeEEEEeCCHHHHHHHHHhCCEeEEEEcCCCCcCCCCCcCccccccCChhhHHHHHHHhcc
Confidence 99999999999999999999999999999999999999999999999988888899999999999999999999999999
Q ss_pred ccEEEEeCCC
Q 015031 401 VKSVVTPIFN 410 (414)
Q Consensus 401 ~k~i~~~~~~ 410 (414)
.|+|++++..
T Consensus 482 ~k~i~~~~~~ 491 (494)
T d1bxsa_ 482 VKTVTIKISQ 491 (494)
T ss_dssp EEEEEEECSC
T ss_pred eEEEEEecCC
Confidence 9999998754
|
| >d1o04a_ c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), ALDH {Human (Homo sapiens), mitochondrial [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: Aldehyde reductase (dehydrogenase), ALDH species: Human (Homo sapiens), mitochondrial [TaxId: 9606]
Probab=100.00 E-value=1e-91 Score=713.99 Aligned_cols=411 Identities=53% Similarity=0.884 Sum_probs=394.7
Q ss_pred CHHHHHHHHHhHHHHHHHHHHHcCCChHHHhhccHHHHHHHHHHHHHhhhhhcCceeccccCccccccccCCcEEEEEcC
Q 015031 1 MLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMSRALQGYTLREPIGVVGHIIP 80 (414)
Q Consensus 1 L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p 80 (414)
|+++++.|++|+++|++++++|+|||..++...|+..+++.+++++.++.+..+...+...+...+++++|+|||++|+|
T Consensus 82 L~~~a~~l~~~~eela~~~~~E~GK~~~ea~~~ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~P 161 (494)
T d1o04a_ 82 LNRLADLIERDRTYLAALETLDNGKPYVISYLVDLDMVLKCLRYYAGWADKYHGKTIPIDGDFFSYTRHEPVGVCGQIIP 161 (494)
T ss_dssp HHHHHHHHHHTHHHHHHHHHHHHCCCHHHHHHTHHHHHHHHHHHHHHHTTTCCEEEECCSSSEEEEEEEEECCEEEEECC
T ss_pred HHHHHHHHHHhHHHHHHHHHHHhCcchhhhhhhHHHHHHHHHHHHHHHHHHhcCceeccCCCceeEEEEecccEEEEECC
Confidence 57899999999999999999999999998767899999999999999998877776666566778899999999999999
Q ss_pred CCcChHhhHHHHHHHHhcCCeEEEecCCCChhHHHHHHHHHHHcCCCCCeEEEEcCCchhHHHHHHhCCCcCeEEEeCCH
Q 015031 81 WNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGST 160 (414)
Q Consensus 81 ~n~P~~~~~~~~~~ALaaGN~vv~kps~~~~~~~~~l~~~~~~aglp~g~v~~~~~~~~~~~~~l~~~~~~~~v~~tGs~ 160 (414)
||||+...++++++||++||+||+|||+.+|.++..+.+++.++|+|+|++|+++|++.++++.|+.||+++.|.||||+
T Consensus 162 ~N~P~~~~~~~~~~ALaaGN~VVlKps~~~p~~~~~l~~l~~~aglP~gv~~~v~g~~~~~g~~L~~~~~v~~v~fTGS~ 241 (494)
T d1o04a_ 162 WNFPLLMQAWKLGPALATGNVVVMKVAEQTPLTALYVANLIKEAGFPPGVVNIVPGFGPTAGAAIASHEDVDKVAFTGST 241 (494)
T ss_dssp SSSHHHHHHHHHHHHHHTTCEEEEECCTTSCHHHHHHHHHHHHHTCCTTSEEECCBCTTTHHHHHHTCTTCCEEEEESCH
T ss_pred cccHHHHHHHHHHHHHHcCCeEEEeCCCCCcHHHHHHHHHHHHhCcCcCeEEEEeCCChHHHHHHhhCCCcCEEEEeCCH
Confidence 99999999999999999999999999999999999999999999999999999999888899999999999999999999
Q ss_pred HHHHHHHHHHhhCCCCceeeeCCCCCceeecCCCCHHHHHHHHHHHHhcccCCccccCcEEEEeCccHHHHHHHHHHHHh
Q 015031 161 DVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAK 240 (414)
Q Consensus 161 ~~~~~i~~~~~~~~~~~~~~e~gG~~~~iV~~dadl~~a~~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f~~~l~~~~~ 240 (414)
.+|+.|.+.++.++++|+++|+||+||+||++|||++.|++.+++++|+|+||.|++++++|||++++|+|++.|+++++
T Consensus 242 ~~g~~i~~~aa~~~~~~~~lElGG~~p~iV~~dAdl~~a~~~i~~~~~~~~GQ~C~a~~~v~v~~~i~d~f~~~l~~~~~ 321 (494)
T d1o04a_ 242 EIGRVIQVAAGSSNLKRVTLELGGKSPNIIMSDADMDWAVEQAHFALFFNQGQCSCAGSRTFVQEDIYDEFVERSVARAK 321 (494)
T ss_dssp HHHHHHHHHHHHTTCCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCCTTCEEEEEEEHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhhccCCCeEEEECCCcCcEEEccCccHHHHHHhhhhhccccCcccccccccccccchhhHHHHHHHHHHhh
Confidence 99999998876578999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccCCCCCCCCCccccCCHHHHHHHHHHHHHhhhcCCeEeeCCcccCCCCceeeeEEEEeCCCCCcccccccccceEEE
Q 015031 241 AWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIGKKGYYIEPTIFTNVTEDMLIAKNEIFGPVMAL 320 (414)
Q Consensus 241 ~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v 320 (414)
.+++|+|.++.+++||++++.+++++++++++++++|+++++||....+.|+|++|||+.+++++|++++||+||||++|
T Consensus 322 ~~~~g~p~~~~~~~gpli~~~~~~~~~~~i~~a~~~Ga~vl~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~FGPvl~v 401 (494)
T d1o04a_ 322 SRVVGNPFDSKTEQGPQVDETQFKKILGYINTGKQEGAKLLCGGGIAADRGYFIQPTVFGDVQDGMTIAKEEIFGPVMQI 401 (494)
T ss_dssp HCCBCCTTSTTCSBCCCSSHHHHHHHHHHHHHHHHTTCEEEECCSBCCSSSSCBCCEEEESCCTTSHHHHSCCCSSEEEE
T ss_pred heeecCcccccCccCCCCCHHHHHHHHHHHHHHHHCCCEEEECCCcCCCCCceEcCEEEeCCCCCCHHHhccccCceEEE
Confidence 99999999999999999999999999999999999999999999887778999999999999999999999999999999
Q ss_pred eeeCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHHhccceeEEEECCcCCCCCCCCccCCCCCCCCCcchHHHHHhhhc
Q 015031 321 MKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSIRAGIIWINCYFAFDSDCPYGGYKMSGFGRDCGLESLHNYLQ 400 (414)
Q Consensus 321 ~~~~~~~eai~~~n~~~~gl~~sv~s~d~~~~~~~~~~l~~g~v~vN~~~~~~~~~pfgG~~~sG~g~~~g~~~~~~~~~ 400 (414)
++|+|.||||+++|+++|||++||||+|.+.++++++++++|+|+||+++...+.+||||+|.||+|+++|.+++++||+
T Consensus 402 ~~~~~~~eai~~an~~~~gL~a~i~s~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~PfGG~~~SG~G~~~g~~~~~~ft~ 481 (494)
T d1o04a_ 402 LKFKTIEEVVGRANNSTYGLAAAVFTKDLDKANYLSQALQAGTVWVNCYDVFGAQSPFGGYKMSGSGRELGEYGLQAYTE 481 (494)
T ss_dssp EEECCHHHHHHHHHCSSCCSEEEEECSBHHHHHHHHHHCCSSEEEESCSSCCCTTSCBCCSGGGEESCBSTGGGGGGGEE
T ss_pred EEeCCHHHHHHHHhCCCCCCeEEEEeCCHHHHHHHHHhCCeeEEEEcCCCCCCCCCCcCCcccccCCchhHHHHHHHhcC
Confidence 99999999999999999999999999999999999999999999999988878889999999999999999999999999
Q ss_pred ccEEEEeCCCC
Q 015031 401 VKSVVTPIFNS 411 (414)
Q Consensus 401 ~k~i~~~~~~~ 411 (414)
+|+|+++++++
T Consensus 482 ~k~v~~~~p~k 492 (494)
T d1o04a_ 482 VKTVTVKVPQK 492 (494)
T ss_dssp EEEEEEECSCC
T ss_pred eEEEEEeCCCC
Confidence 99999988753
|
| >d1a4sa_ c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), ALDH {Baltic cod (Gadus callarias) [TaxId: 8053]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: Aldehyde reductase (dehydrogenase), ALDH species: Baltic cod (Gadus callarias) [TaxId: 8053]
Probab=100.00 E-value=4.9e-89 Score=694.81 Aligned_cols=411 Identities=40% Similarity=0.729 Sum_probs=391.7
Q ss_pred CHHHHHHHHHhHHHHHHHHHHHcCCChHHHhhccHHHHHHHHHHHHHhhhhhcCceeccccCccccccccCCcEEEEEcC
Q 015031 1 MLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMSRALQGYTLREPIGVVGHIIP 80 (414)
Q Consensus 1 L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p 80 (414)
|+++++.|++|+++|++++++|+|||..++ ..|+..+++.+++++.+.++..+.....+.+...+..++|+|||++|+|
T Consensus 86 L~~~a~~L~~~~eela~~~~~etGkp~~ea-~~ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p 164 (503)
T d1a4sa_ 86 MLEAARIIRERRDNIAKLEVINNGKTITEA-EYDIDAAWQCIEYYAGLAPTLSGQHIQLPGGAFAYTRREPLGVCAGILA 164 (503)
T ss_dssp HHHHHHHHHHTHHHHHHHHHHHHCCCHHHH-HHHHHHHHHHHHHHHHHGGGCCEEEEECGGGCEEEEEEEECSEEEEECC
T ss_pred HHHHHHHHHHhHHHHHHHHHHhhhhcchhh-hhhhhhhhhcccccccccccccccccccCCCcccccccccceeeecccC
Confidence 578999999999999999999999999975 6799999999999999988776665555567778999999999999999
Q ss_pred CCcChHhhHHHHHHHHhcCCeEEEecCCCChhHHHHHHHHHHHcCCCCCeEEEEcCCchhHHHHHHhCCCcCeEEEeCCH
Q 015031 81 WNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGST 160 (414)
Q Consensus 81 ~n~P~~~~~~~~~~ALaaGN~vv~kps~~~~~~~~~l~~~~~~aglp~g~v~~~~~~~~~~~~~l~~~~~~~~v~~tGs~ 160 (414)
||||+...++++++||++||+||+|||+.+|.++..+++++.++|+|+|++|++++ +.++++.|++||++|.|.||||+
T Consensus 165 ~NfP~~~~~~~~~~ALaaGN~VV~Kps~~~p~~~~~l~~~~~~aglP~gv~~~v~g-~~e~g~~L~~~~~v~~V~fTGS~ 243 (503)
T d1a4sa_ 165 WNYPFMIAAWKCAPALACGNAVVFKPSPMTPVTGVILAEIFHEAGVPVGLVNVVQG-GAETGSLLCHHPNVAKVSFTGSV 243 (503)
T ss_dssp SSSHHHHHHHHHHHHHHTTCEEEEECCTTSCHHHHHHHHHHHHTTCCTTSEEECCC-SHHHHHHHHHCTTCCEEEEESCH
T ss_pred CCChHHHHHHHHHHHHHcCCEEEEECCCCChHHHHHHHHHHHHhCcCCCeEEEecC-CHHHHHHHHhCCCcCEEEEeCCH
Confidence 99999999999999999999999999999999999999999999999999999999 66899999999999999999999
Q ss_pred HHHHHHHHHHhhCCCCceeeeCCCCCceeecCCCCHHHHHHHHHHHHhcccCCccccCcEEEEeCccHHHHHHHHHHHHh
Q 015031 161 DVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAK 240 (414)
Q Consensus 161 ~~~~~i~~~~~~~~~~~~~~e~gG~~~~iV~~dadl~~a~~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f~~~l~~~~~ 240 (414)
++|+.|.+.++ ++++|+++|+||+||+||++|||++.|++.+++++|.++||.|++++|+|||++++++|+++|.+.++
T Consensus 244 ~~G~~i~~~aa-~~~~~~~lElGG~~p~iV~~dAdl~~a~~~i~~~~~~~~GQ~C~a~~ri~v~~~~~~~~~~~l~~~~~ 322 (503)
T d1a4sa_ 244 PTGKKVMEMSA-KTVKHVTLELGGKSPLLIFKDCELENAVRGALMANFLTQGQVCTNGTRVFVQREIMPQFLEEVVKRTK 322 (503)
T ss_dssp HHHHHHHHHHH-TTTCEEEEECCCCCEEEECTTSCHHHHHHHHHHTTCGGGGCCTTCCCEEEEEGGGHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhh-hcCCcEEEECCCcCcEEECCCccHHHHhhhhhcchhccCCCccccCcceEEEechhhhHHHHHHHhhh
Confidence 99999999987 88999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccCCCCCCCCCccccCCHHHHHHHHHHHHHhhhcCCeEeeCCcccC------CCCceeeeEEEEeCCCCCcccccccc
Q 015031 241 AWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIG------KKGYYIEPTIFTNVTEDMLIAKNEIF 314 (414)
Q Consensus 241 ~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~------~~g~~~~Ptvl~~~~~~~~~~~~E~f 314 (414)
++++|+|.++.+++||++++.+++++++++++++++|+++++||.... ..|+|++|||+.+++++|+++++|+|
T Consensus 323 ~~~~g~~~~~~~~~gp~i~~~~~~~~~~~~~~a~~~Ga~v~~gg~~~~~~~~~~~~G~~~~Ptvl~~~~~~~~~~~~E~F 402 (503)
T d1a4sa_ 323 AIVVGDPLLTETRMGGLISKPQLDKVLGFVAQAKKEGARVLCGGEPLTPSDPKLKNGYFMSPCVLDNCRDDMTCVKEEIF 402 (503)
T ss_dssp TCCBSCTTSTTCCBCCCSCHHHHHHHHHHHHHHHHHTCEEEECCSBCCCSSGGGTTSCCBCCEEEESCCTTSHHHHSCCC
T ss_pred hEeeccccccccccccccCHHHHHHHHHHHHHHHHcCCEEEECCcccCCCCcccCCceEEcCEEEeCCCCCCHHHhcccc
Confidence 999999999999999999999999999999999999999999997532 47899999999999999999999999
Q ss_pred cceEEEeeeCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHHhccceeEEEECCcCCCCCCCCccCCCCCCCCCcchHHH
Q 015031 315 GPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSIRAGIIWINCYFAFDSDCPYGGYKMSGFGRDCGLES 394 (414)
Q Consensus 315 gPvl~v~~~~~~~eai~~~n~~~~gl~~sv~s~d~~~~~~~~~~l~~g~v~vN~~~~~~~~~pfgG~~~sG~g~~~g~~~ 394 (414)
|||++|++|+|.||||+++|+++|||++||||+|.+.++++++++++|+|+||++....+.+||||+|.||+|+++|.+|
T Consensus 403 gPvl~v~~~~~~~eai~~an~~~~gL~~~i~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~PfGG~k~SG~G~~~g~~~ 482 (503)
T d1a4sa_ 403 GPVMSVLPFDTEEEVLQRANNTTFGLASGVFTRDISRAHRVAANLEAGTCYINTYSISPVEVPFGGYKMSGFGRENGQAT 482 (503)
T ss_dssp SSEEEEEEECCHHHHHHHHHCSSCCSEEEEECSBHHHHHHHHHHSCSSEEEESCCCCCCTTSCBCCSGGGEECCBSTTGG
T ss_pred CceEEEEEcCCHHHHHHHHhCCCCCCeEEEEcCCHHHHHHHHHhCCeeEEEEeCCCCCCCCCCccCcccCcCCcchHHHH
Confidence 99999999999999999999999999999999999999999999999999999988877889999999999999999999
Q ss_pred HHhhhcccEEEEeCC-CCCCC
Q 015031 395 LHNYLQVKSVVTPIF-NSPWL 414 (414)
Q Consensus 395 ~~~~~~~k~i~~~~~-~~~~~ 414 (414)
+++||+.|+|+++++ -+.||
T Consensus 483 l~~~t~~k~v~~~~~~~~~~f 503 (503)
T d1a4sa_ 483 VDYYSQLKTVIVEMGDVDSLF 503 (503)
T ss_dssp GGGSEEEEEEEECCSCCCCCC
T ss_pred HHHhhCeEEEEEcCCCCCCCC
Confidence 999999999999886 35555
|
| >d1wnda_ c.82.1.1 (A:) Putative betaine aldehyde dehydrogenase YdcW {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: Putative betaine aldehyde dehydrogenase YdcW species: Escherichia coli [TaxId: 562]
Probab=100.00 E-value=2.1e-87 Score=679.50 Aligned_cols=406 Identities=37% Similarity=0.638 Sum_probs=377.7
Q ss_pred CHHHHHHHHHhHHHHHHHHHHHcCCChHHHhhccHHHHHHHHHHHHHhhhhhcCceec-cccCccccccccCCcEEEEEc
Q 015031 1 MLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLK-MSRALQGYTLREPIGVVGHII 79 (414)
Q Consensus 1 L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~~~~~~~~~~~-~~~~~~~~~~~~P~Gvv~~i~ 79 (414)
|+++++.|++|+++|+++++.|+|||..++...++..+...+++++...........+ ...+...+++++|+|||++|+
T Consensus 67 L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVV~~I~ 146 (474)
T d1wnda_ 67 LLKLADVIEENGQVFAELESRNCGKPLHSAFNDEIPAIVDVFRFFAGAARCLNGLAAGEYLEGHTSMIRRDPLGVVASIA 146 (474)
T ss_dssp HHHHHHHHHHTHHHHHHHHHHHHCCCHHHHHHTHHHHHHHHHHHHHHHTTCCEEECBEEEETTEEEEEEEEECSEEEEEC
T ss_pred HHHHHHHHHhCHHHHHHHHHHHhCCChhHhhhcccccccccccccccccccccccccccccCCcceEEEEecccceEEEe
Confidence 5789999999999999999999999999865667777777777776655443322221 124667889999999999999
Q ss_pred CCCcChHhhHHHHHHHHhcCCeEEEecCCCChhHHHHHHHHHHHcCCCCCeEEEEcCCchhHHHHHHhCCCcCeEEEeCC
Q 015031 80 PWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGS 159 (414)
Q Consensus 80 p~n~P~~~~~~~~~~ALaaGN~vv~kps~~~~~~~~~l~~~~~~aglp~g~v~~~~~~~~~~~~~l~~~~~~~~v~~tGs 159 (414)
|||||+...++++++||++||+||+|||+.+|.++..++++++++ +|+|++|++++++.++++.|++||++++|.||||
T Consensus 147 p~N~P~~~~~~~~a~ALaaGN~Vv~Kps~~~p~~~~~~~~l~~~~-lP~gv~~~v~g~~~~~g~~L~~~p~i~~v~fTGS 225 (474)
T d1wnda_ 147 PWNYPLMMAAWKLAPALAAGNCVVLKPSEITPLTALKLAELAKDI-FPAGVVNILFGRGKTVGDPLTGHPKVRMVSLTGS 225 (474)
T ss_dssp CSSSHHHHHHHHHHHHHHTTCEEEEECCTTCCHHHHHHHHHHTTT-SCTTSEEECCCCTTTTHHHHHTCTTEEEEEEESC
T ss_pred ecchHhhhhhccHHHHHHhCCCEEEeCCCcCcHHHHHHHHHHHHh-CCCCcEEEEeCCcHHHHHHHHhCCCcCEEEeeCC
Confidence 999999999999999999999999999999999999999999875 9999999999988889999999999999999999
Q ss_pred HHHHHHHHHHHhhCCCCceeeeCCCCCceeecCCCCHHHHHHHHHHHHhcccCCccccCcEEEEeCccHHHHHHHHHHHH
Q 015031 160 TDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKA 239 (414)
Q Consensus 160 ~~~~~~i~~~~~~~~~~~~~~e~gG~~~~iV~~dadl~~a~~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f~~~l~~~~ 239 (414)
+++|+.|.+.++ ++++|+++|+|||||+||++|||++.|++.+++++|+|+||.|++++++|||+++||+|+++|++.+
T Consensus 226 ~~~G~~i~~~a~-~~~k~~~lElgG~~p~iV~~dad~~~a~~~i~~~~~~~~GQ~C~a~~rv~V~~~i~d~~~~~l~~~~ 304 (474)
T d1wnda_ 226 IATGEHIISHTA-SSIKRTHMELGGKAPVIVFDDADIEAVVEGVRTFGYYNAGQDCTAACRIYAQKGIYDTLVEKLGAAV 304 (474)
T ss_dssp HHHHHHHHHHHG-GGTCEEEEECCCCCEEEECTTSCHHHHHHHHHHHTTGGGGCSTTCCCEEEEETTTHHHHHHHHHHHH
T ss_pred HHHHHHHHHhhh-cCCCeEEEEcCCCCceEEcCchhhhhhhhhhhhhcccCCCcccccccccccccccchhhhhhhHHHH
Confidence 999999999987 8899999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hccccCCCCCCCCCccccCCHHHHHHHHHHHHHhhhcCCe-EeeCCcccCCCCceeeeEEEEeCCCCCcccccccccceE
Q 015031 240 KAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGAT-LLTGGKPIGKKGYYIEPTIFTNVTEDMLIAKNEIFGPVM 318 (414)
Q Consensus 240 ~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ga~-v~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl 318 (414)
+++++|+|.++++.+||+++..+.+++.+++++++.+|+. ++.|+....+.|+|+.|||+.++++++++++||+||||+
T Consensus 305 ~~l~~G~~~~~~~~~Gpli~~~~~~~~~~~i~~a~~~ga~~v~~G~~~~~~~g~~~~Ptil~~~~~~~~~~~eE~FGPVl 384 (474)
T d1wnda_ 305 ATLKSGAPDDESTELGPLSSLAHLERVGKAVEEAKATGHIKVITGGEKRKGNGYYYAPTLLAGALQDDAIVQKEVFGPVV 384 (474)
T ss_dssp HTCCBCCTTSTTCCBCCCSCHHHHHHHHHHHHHHHHTSSCEEEECCSBCSSSSCCBCCEEEECCCTTSHHHHSCCCSSEE
T ss_pred HhhccCCcCCCCceecccccccccchHHHHHHHHHHCCCeEEEeCCcccCCCceEEeeeEeecccccccceeecccCCeE
Confidence 9999999999999999999999999999999999999985 666666666789999999999999999999999999999
Q ss_pred EEeeeCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHHhccceeEEEECCcCCCCCCCCccCCCCCCCCCcchHHHHHhh
Q 015031 319 ALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSIRAGIIWINCYFAFDSDCPYGGYKMSGFGRDCGLESLHNY 398 (414)
Q Consensus 319 ~v~~~~~~~eai~~~n~~~~gl~~sv~s~d~~~~~~~~~~l~~g~v~vN~~~~~~~~~pfgG~~~sG~g~~~g~~~~~~~ 398 (414)
+|++|+|.||||+++|+++|||+++|||+|.++++++++++++|+|+||++....+.+||||+|.||+|+++|.+|+++|
T Consensus 385 ~v~~~~~~deai~~an~~~~GL~a~i~t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~PfGG~k~SG~G~~~g~~gl~~~ 464 (474)
T d1wnda_ 385 SVTPFDNEEQVVNWANDSQYGLASSVWTKDVGRAHRVSARLQYGCTWVNTHFMLVSEMPHGGQKLSGYGKDMSLYGLEDY 464 (474)
T ss_dssp EEEEECCHHHHHHHHHSSSCCSEEEEECSBHHHHHHHHHHCCSSEEEESCCCCCCTTSCBCCSGGGEECCBSHHHHHHTT
T ss_pred EEEEeCCHHHHHHHHhCCCCCCeEEEEeCCHHHHHHHHHhCCccEEEEeCCCCccCCCCcccccccccCccCHHHHHHHc
Confidence 99999999999999999999999999999999999999999999999999888788999999999999999999999999
Q ss_pred hcccEEEEeC
Q 015031 399 LQVKSVVTPI 408 (414)
Q Consensus 399 ~~~k~i~~~~ 408 (414)
|++|+|+++.
T Consensus 465 t~~k~v~i~~ 474 (474)
T d1wnda_ 465 TVVRHVMVKH 474 (474)
T ss_dssp EEEEEEEEEC
T ss_pred CCEEEEEEeC
Confidence 9999998863
|
| >d1uzba_ c.82.1.1 (A:) 1-pyrroline-5-carboxylate dehydrogenase {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: 1-pyrroline-5-carboxylate dehydrogenase species: Thermus thermophilus [TaxId: 274]
Probab=100.00 E-value=8.9e-86 Score=673.48 Aligned_cols=405 Identities=32% Similarity=0.547 Sum_probs=375.4
Q ss_pred CHHHHHHHHHhHHHHHHHHHHHcCCChHHHhhccHHHHHHHHHHHHHhhhhhcCceec--cccCccccccccCCcEEEEE
Q 015031 1 MLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLK--MSRALQGYTLREPIGVVGHI 78 (414)
Q Consensus 1 L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~~~~~~~~~~~--~~~~~~~~~~~~P~Gvv~~i 78 (414)
|+++++.|++|+++|+++++.|+|||..++ ..|+..+++.+++++..+....+.... ...+...+.+++|+|||++|
T Consensus 102 L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a-~~ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~I 180 (516)
T d1uzba_ 102 LLKAAALMRRRKRELEATLVYEVGKNWVEA-SADVAEAIDFIEYYARAALRYRYPAVEVVPYPGEDNESFYVPLGAGVVI 180 (516)
T ss_dssp HHHHHHHHHHTHHHHHHHHHHHHCCCHHHH-HHHHHHHHHHHHHHHHHHGGGCSSCCCCCCCTTEEEEEEEEECCEEEEE
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCCcccc-chhHHHHHHHHHHHHHHHHhhhhcccccccccccceeEEeeccCccccc
Confidence 578999999999999999999999999975 689999999999999988766544222 12455677889999999999
Q ss_pred cCCCcChHhhHHHHHHHHhcCCeEEEecCCCChhHHHHHHHHHHHcCCCCCeEEEEcCCchhHHHHHHhCCCcCeEEEeC
Q 015031 79 IPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTG 158 (414)
Q Consensus 79 ~p~n~P~~~~~~~~~~ALaaGN~vv~kps~~~~~~~~~l~~~~~~aglp~g~v~~~~~~~~~~~~~l~~~~~~~~v~~tG 158 (414)
+|||||+...++++++||++||+||+|||+.+|+++..+.+++.++|+|+|++|+++|++++.++.|++||++++|.|||
T Consensus 181 ~PwN~Pl~~~~~~~~~ALaaGN~Vv~Kps~~~p~~~~~l~~~~~~aglP~gv~~~v~g~~~~~~~~L~~hp~v~~I~FTG 260 (516)
T d1uzba_ 181 APWNFPVAIFTGMIVGPVAVGNTVIAKPAEDAVVVGAKVFEIFHEAGFPPGVVNFLPGVGEEVGAYLVEHPRIRFINFTG 260 (516)
T ss_dssp CCSSSTTHHHHHHHHHHHHTTCEEEEECCGGGHHHHHHHHHHHHHHTCCTTSEEECCCSSSHHHHHHHTCTTCCEEEEES
T ss_pred cccccccccccccccchhhhcccccccccchhHHHHHHHHHHHHHhCcCcCeEEEccCChHHHHHHHHhCCCcCEEeccc
Confidence 99999999999999999999999999999999999999999999999999999999998888999999999999999999
Q ss_pred CHHHHHHHHHHHhh-----CCCCceeeeCCCCCceeecCCCCHHHHHHHHHHHHhcccCCccccCcEEEEeCccHHHHHH
Q 015031 159 STDVGRQVMQAAAT-----SNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEK 233 (414)
Q Consensus 159 s~~~~~~i~~~~~~-----~~~~~~~~e~gG~~~~iV~~dadl~~a~~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f~~ 233 (414)
|..+|+.|.+.++. .+++|+++|+||+||+||++|||++.|++.+++++|.|+||.|++++++|||++++|+|++
T Consensus 261 s~~~G~~i~~~aa~~~~~~~~~k~v~lElgG~~p~iV~~dAd~~~aa~~i~~~~~~~~GQ~C~a~~ri~v~~~i~d~~~~ 340 (516)
T d1uzba_ 261 SLEVGLKIYEAAGRLAPGQTWFKRAYVETGGKNAIIVDETADFDLAAEGVVVSAYGFQGQKCSAASRLILTQGAYEPVLE 340 (516)
T ss_dssp CHHHHHHHHHHHTSCCTTCCSCCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCSTTCEEEEEEEHHHHHHHHH
T ss_pred chhHHHHHHHHHhhcccchhhhhhheeeccCccceeeecchhHHHHHHHHhhhhcccCCCcccccCccccccccccchhh
Confidence 99999999988762 4679999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhccccCCCCCCCCCccccCCHHHHHHHHHHHHHhhhcCCeEeeCCcccCCCCceeeeEEEEeCCCCCccccccc
Q 015031 234 KLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIGKKGYYIEPTIFTNVTEDMLIAKNEI 313 (414)
Q Consensus 234 ~l~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~ 313 (414)
+++++++++++| |.++.+++||+++..+++++++++++++.+|+.+ +||...+..|+|++|||+.+++++|++++||+
T Consensus 341 ~~~~~~~~l~~g-~~~~~~~~gpli~~~~~~~~~~~i~~a~~~Ga~v-~~g~~~~~~g~~~~Ptvl~~v~~~~~~~~eE~ 418 (516)
T d1uzba_ 341 RVLKRAERLSVG-PAEENPDLGPVVSAEQERKVLSYIEIGKNEGQLV-LGGKRLEGEGYFIAPTVFTEVPPKARIAQEEI 418 (516)
T ss_dssp HHHHHHTTCCBS-CGGGCCSBCCCSCHHHHHHHHHHHHHHTTTSEEE-ECCSBCSSSSCCBCCEEEESCCTTSGGGTSCC
T ss_pred HHHHHHHhcccC-CCcccCccccccCHHHHHHHHHHHHHHHHCCCEE-ECCCcCCCCCceECCEEEecCCCCchhhcCCC
Confidence 999999999999 5678899999999999999999999999988655 56666666899999999999999999999999
Q ss_pred ccceEEEeeeCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHHhccceeEEEECCcCC--CCCCCCccCCCCCCCCCcch
Q 015031 314 FGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSIRAGIIWINCYFA--FDSDCPYGGYKMSGFGRDCG 391 (414)
Q Consensus 314 fgPvl~v~~~~~~~eai~~~n~~~~gl~~sv~s~d~~~~~~~~~~l~~g~v~vN~~~~--~~~~~pfgG~~~sG~g~~~g 391 (414)
||||++|++|+|.||||+++|+++|||++||||+|.+.++++++++++|+|+||++.+ ..+.+||||+|.||+|+++|
T Consensus 419 FGPvl~v~~~~d~eeai~~an~~~~gL~a~i~s~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~~~PfGG~k~SG~G~~~G 498 (516)
T d1uzba_ 419 FGPVLSVIRVKDFAEALEVANDTPYGLTGGVYSRKREHLEWARREFHVGNLYFNRKITGALVGVQPFGGFKLSGTNAKTG 498 (516)
T ss_dssp CSSEEEEEEESSHHHHHHHHHCSSCCSEEEEECSCHHHHHHHHHHSCCSEEEESSCSCCCCTTTSCBCCSGGGBSCCCBT
T ss_pred cCceEEEEEeCCHHHHHHHHHCCCCCCEEEEEcCCHHHHHHHHHhCCEeEEEEcCCCCCCCcCCCCCcCcccccCCcccc
Confidence 9999999999999999999999999999999999999999999999999999999765 34689999999999998765
Q ss_pred -HHHHHhhhcccEEEEeC
Q 015031 392 -LESLHNYLQVKSVVTPI 408 (414)
Q Consensus 392 -~~~~~~~~~~k~i~~~~ 408 (414)
.+++++||++|+|+.++
T Consensus 499 ~~~~l~~~~~~k~v~~r~ 516 (516)
T d1uzba_ 499 ALDYLRLFLEMKAVAERF 516 (516)
T ss_dssp SHHHHHTTEEEEEEEEEC
T ss_pred hHHHHHHhCCeeeEEEcC
Confidence 89999999999998754
|
| >d1ad3a_ c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), ALDH {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: Aldehyde reductase (dehydrogenase), ALDH species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=100.00 E-value=5.5e-80 Score=619.80 Aligned_cols=397 Identities=27% Similarity=0.405 Sum_probs=358.2
Q ss_pred CHHHHHHHHHhHHHHHHHHHHHcCCChHHHhhccHHHHHHHHHHHHHhhhhhcCcee----ccccCccccccccCCcEEE
Q 015031 1 MLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVL----KMSRALQGYTLREPIGVVG 76 (414)
Q Consensus 1 L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~~~~~~~~~~----~~~~~~~~~~~~~P~Gvv~ 76 (414)
|+++++.|++|+++|++++++|+||+..++...|+..+++.++++++.+........ ....+...++.++|+|||+
T Consensus 28 L~~~a~~l~~~~~~l~~~~~~e~GK~~~ea~~~ev~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~ 107 (446)
T d1ad3a_ 28 LEALQRMINENLKSISGALASDLGKNEWTSYYEEVAHVLEELDTTIKELPDWAEDEPVAKTRQTQQDDLYIHSEPLGVVL 107 (446)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHTHHHHHHHHHHHHHHHHHHHSCEECCCCSTTTTSEEEEEEEECSEEE
T ss_pred HHHHHHHHHHCHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccccCCCCCCcceEEEeecceeEe
Confidence 578999999999999999999999999987678999999999988877655433211 1123455678899999999
Q ss_pred EEcCCCcChHhhHHHHHHHHhcCCeEEEecCCCChhHHHHHHHHHHHcCCCCCeEEEEcCCchhHHHHHHhCCCcCeEEE
Q 015031 77 HIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSF 156 (414)
Q Consensus 77 ~i~p~n~P~~~~~~~~~~ALaaGN~vv~kps~~~~~~~~~l~~~~~~aglp~g~v~~~~~~~~~~~~~l~~~~~~~~v~~ 156 (414)
+|+|||||+...++++++||++||+||+|||+.+|.++..+++++++. +|+++++++.+.+.+. ..+ .++++|.|.|
T Consensus 108 ~I~P~N~P~~~~~~~~~~ALaaGN~vi~Kps~~~p~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~-~~~-~~~~~~~v~f 184 (446)
T d1ad3a_ 108 VIGAWNYPFNLTIQPMVGAVAAGNAVILKPSEVSGHMADLLATLIPQY-MDQNLYLVVKGGVPET-TEL-LKERFDHIMY 184 (446)
T ss_dssp EECCSSSTTHHHHHHHHHHHHTTCEEEEECCSTTHHHHHHHHHHHHHH-SCTTTEEECCCSHHHH-HHH-TTSCCSEEEE
T ss_pred cccccccccccccccccccchhcccccccccceecccccccccccccc-ccccccccccccchhh-hhh-cccccCceEE
Confidence 999999999999999999999999999999999999999999998775 8999999999865443 344 4567999999
Q ss_pred eCCHHHHHHHHHHHhhCCCCceeeeCCCCCceeecCCCCHHHHHHHHHHHHhcccCCccccCcEEEEeCccHHHHHHHHH
Q 015031 157 TGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLV 236 (414)
Q Consensus 157 tGs~~~~~~i~~~~~~~~~~~~~~e~gG~~~~iV~~dadl~~a~~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f~~~l~ 236 (414)
|||+.+|+.|.+.++ ++++|+++|+|||||+||++|||++.|++.+++++|.|+||.|+++++||||++++|+|+++|.
T Consensus 185 TGs~~~G~~i~~~aa-~~~~~~~lElgG~np~iV~~dADl~~Aa~~iv~~~~~~~GQ~C~a~~rv~v~~~i~~~f~~~l~ 263 (446)
T d1ad3a_ 185 TGSTAVGKIVMAAAA-KHLTPVTLELGGKSPCYVDKDCDLDVACRRIAWGKFMNSGQTCVAPDYILCDPSIQNQIVEKLK 263 (446)
T ss_dssp ESCHHHHHHHHHHHH-TTTCCEEEECCCCCEEEECSSSCHHHHHHHHHHHHHTTTTCCTTSCCEEEECGGGHHHHHHHHH
T ss_pred ECcHHHHHHHHHHHH-hcCCcEEEECCCcCcEEEecCCchHHHHHHHHHHHhcCCCCccccCCccccccchhHHHHHhhh
Confidence 999999999999988 8899999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhccccCCCCCCCCCccccCCHHHHHHHHHHHHHhhhcCCeEeeCCcccCCCCceeeeEEEEeCCCCCcccccccccc
Q 015031 237 EKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIGKKGYYIEPTIFTNVTEDMLIAKNEIFGP 316 (414)
Q Consensus 237 ~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgP 316 (414)
+.++.+ +|++.++.+++||++++.+++++.++++++ +...|+.. ...+.|+.|||+.+++++|++++||+|||
T Consensus 264 ~~~~~~-~g~~~~~~~~~gp~i~~~~~~~~~~~~~~a-----~~~~g~~~-~~~~~~~~Ptil~~v~~~~~~~~eE~FgP 336 (446)
T d1ad3a_ 264 KSLKDF-YGEDAKQSRDYGRIINDRHFQRVKGLIDNQ-----KVAHGGTW-DQSSRYIAPTILVDVDPQSPVMQEEIFGP 336 (446)
T ss_dssp HHHHHH-HCSCGGGCTTSCCCSCHHHHHHHHHTTTTS-----CEEECCCE-ETTTTEECCEEECSCCTTSGGGTSCCCSS
T ss_pred hhhhee-ecccccccccccchhhhhhhhhhhccccch-----hcccceee-cCCCCCcCCEEEECCCCCCHHHhCcccCc
Confidence 999887 799999999999999999999998877654 34444433 34788999999999999999999999999
Q ss_pred eEEEeeeCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHHhccceeEEEECCcCC--CCCCCCccCCCCCCCCCcchHHH
Q 015031 317 VMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSIRAGIIWINCYFA--FDSDCPYGGYKMSGFGRDCGLES 394 (414)
Q Consensus 317 vl~v~~~~~~~eai~~~n~~~~gl~~sv~s~d~~~~~~~~~~l~~g~v~vN~~~~--~~~~~pfgG~~~sG~g~~~g~~~ 394 (414)
|++|++|+|+||||+++|+++|||+++|||+|.+.++++++++++|+|+||++.. ..+.+||||+|.||+|+++|.+|
T Consensus 337 Vl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~~a~~~~~~l~~G~v~iN~~~~~~~~~~~PfGG~k~SG~G~~~g~~~ 416 (446)
T d1ad3a_ 337 VMPIVCVRSLEEAIQFINQREKPLALYVFSNNEKVIKKMIAETSSGGVTANDVIVHITVPTLPFGGVGNSGMGAYHGKKS 416 (446)
T ss_dssp EECEEECSSHHHHHHHHHTSCCCSEEEEECSCHHHHHHHHTTCCCSEEEESSSSGGGGCTTSCCCCCGGGEECCCSTHHH
T ss_pred ceEEEEeccHHHHHHHHhCCCCCCEEEEEcCCHHHHHHHHHhCCEeEEEEeCCccCCCCCCCCccccccceeccchHHHH
Confidence 9999999999999999999999999999999999999999999999999998754 55789999999999999999999
Q ss_pred HHhhhcccEEEEeC
Q 015031 395 LHNYLQVKSVVTPI 408 (414)
Q Consensus 395 ~~~~~~~k~i~~~~ 408 (414)
+++||++|+|+++.
T Consensus 417 l~~ft~~k~v~~~~ 430 (446)
T d1ad3a_ 417 FETFSHRRSCLVKS 430 (446)
T ss_dssp HHHTEEEEEEEECC
T ss_pred HHHHhceeEEEEcc
Confidence 99999999998853
|
| >d1ky8a_ c.82.1.1 (A:) Non-phosphorylating glyceraldehyde-3-phosphate dehydrogenase GapN {Archaeon Thermoproteus tenax [TaxId: 2271]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: Non-phosphorylating glyceraldehyde-3-phosphate dehydrogenase GapN species: Archaeon Thermoproteus tenax [TaxId: 2271]
Probab=100.00 E-value=1.4e-80 Score=633.13 Aligned_cols=406 Identities=30% Similarity=0.497 Sum_probs=372.3
Q ss_pred CHHHHHHHHHhHHHHHHHHHHHcCCChHHHhhccHHHHHHHHHHHHHhhhhhcCceecc-----ccCccccccccCCcEE
Q 015031 1 MLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKM-----SRALQGYTLREPIGVV 75 (414)
Q Consensus 1 L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~P~Gvv 75 (414)
|+++++.|++|+++|++++++|+|||..++ ..|+.++++.+++++..+++..+..... ..+...+.+++|+|||
T Consensus 81 L~~~a~~l~~~~~~la~~~~~etGk~~~~a-~~Ev~~~i~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~r~P~GVV 159 (499)
T d1ky8a_ 81 LRKAADIIERNLDVFAEVLVMNAGKPKSAA-VGEVKAAVDRLRLAELDLKKIGGDYIPGDWTYDTLETEGLVRREPLGVV 159 (499)
T ss_dssp HHHHHHHHHHTHHHHHHHHHHHHCCCHHHH-HHHHHHHHHHHHGGGGGGTTTCCEEEESTTSSTTTTEEEEEEEEECSEE
T ss_pred HHHHHHHHHHhHHHHHHHHHHHhCCCHHHH-hhhhhcccccccchhhhhhhhhhceeccccccccccccceeeeeccccc
Confidence 578999999999999999999999999974 6899999999999998887765543221 1345677899999999
Q ss_pred EEEcCCCcChHhhHHHHHHHHhcCCeEEEecCCCChhHHHHHHHHHHHcCCCCCeEEEEcCCchhHHHHHHhCCCcCeEE
Q 015031 76 GHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVS 155 (414)
Q Consensus 76 ~~i~p~n~P~~~~~~~~~~ALaaGN~vv~kps~~~~~~~~~l~~~~~~aglp~g~v~~~~~~~~~~~~~l~~~~~~~~v~ 155 (414)
++|+|||||+...++++++||++||+||+|||+.+|.++..+.+++.++|+|.++++++.+++ +.+..|+.|++++.+.
T Consensus 160 ~~I~p~N~P~~~~~~~~~~ALaaGn~Vi~Kps~~~~~~~~~l~~~~~~~~~p~~~~~~~~~~~-~~~~~l~~~~~i~~v~ 238 (499)
T d1ky8a_ 160 AAITPFNYPLFDAVNKITYSFIYGNAVVVKPSISDPLPAAMAVKALLDAGFPPDAIALLNLPG-KEAEKIVADDRVAAVS 238 (499)
T ss_dssp EEECCSSSHHHHHHHHHHHHHHTTCEEEEECCTTSCHHHHHHHHHHHHHTCCTTSEEECCCCG-GGGHHHHHCTTCCEEE
T ss_pred cccccccccchhhhhcchhhhcccccccccccccchhhhhhhccccccccccceeeecccCCh-HHHHHHhhccceeEEE
Confidence 999999999999999999999999999999999999999999999999999999999999865 5678899999999999
Q ss_pred EeCCHHHHHHHHHHHhhCCCCceeeeCCCCCceeecCCCCHHHHHHHHHHHHhcccCCccccCcEEEEeCccHHHHHHHH
Q 015031 156 FTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKL 235 (414)
Q Consensus 156 ~tGs~~~~~~i~~~~~~~~~~~~~~e~gG~~~~iV~~dadl~~a~~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f~~~l 235 (414)
||||...++.+.+.++ .+|+++|+||+||+||++|||++.|++.+++++|+++||.|++++++|||++++|+|+++|
T Consensus 239 ftGs~~~g~~i~~~~~---~~~~~lElgG~np~iV~~dAdl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~v~d~f~~~l 315 (499)
T d1ky8a_ 239 FTGSTEVGERVVKVGG---VKQYVMELGGGDPAIVLEDADLDLAADKIARGIYSYAGQRCDAIKLVLAERPVYGKLVEEV 315 (499)
T ss_dssp EESCHHHHHHHHHHHC---SSEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCCTTCEEEEEEEHHHHHHHHHHH
T ss_pred eecccccceEEeeccc---ccceEEecCCCCeEEEcCCcChhhhhhhhhhhhhccCcccccccccccccchhHHHHHHHH
Confidence 9999999999988754 5899999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhccccCCCCCCCCCccccCCHHHHHHHHHHHHHhhhcCCeEeeCCcccCCCCceeeeEEEE---eCCCCCcccccc
Q 015031 236 VEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIGKKGYYIEPTIFT---NVTEDMLIAKNE 312 (414)
Q Consensus 236 ~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~~~g~~~~Ptvl~---~~~~~~~~~~~E 312 (414)
+++++++++|+|.|+++++||+++..+++++++++++++.+|++++.||.... ..++.++++. ++.+||++++||
T Consensus 316 ~~~~~~l~~G~p~~~~~~~gpli~~~~~~~~~~~i~~a~~~ga~v~~~~~~~~--~~~~~~~~~~~~~~~~~d~~~~~eE 393 (499)
T d1ky8a_ 316 AKRLSSLRVGDPRDPTVDVGPLISPSAVDEMMAAIEDAVEKGGRVLAGGRRLG--PTYVQPTLVEAPADRVKDMVLYKRE 393 (499)
T ss_dssp HHHHHTCCBSCTTSTTCSBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCCEEE--TTEECCEEEECCHHHHTTSHHHHSC
T ss_pred HHHHHhCccCCCCCccccccccchHHHHHHHHHHHHHHHHcCCEEeeeecccc--ccccccccccccccCCCCChhhhcc
Confidence 99999999999999999999999999999999999999999999999998753 3344444443 455799999999
Q ss_pred cccceEEEeeeCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHHhccceeEEEECCcCCC-CCCCCccCCCCCCCCCcch
Q 015031 313 IFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSIRAGIIWINCYFAF-DSDCPYGGYKMSGFGRDCG 391 (414)
Q Consensus 313 ~fgPvl~v~~~~~~~eai~~~n~~~~gl~~sv~s~d~~~~~~~~~~l~~g~v~vN~~~~~-~~~~pfgG~~~sG~g~~~g 391 (414)
+||||++|++|+|.|||++++|+++|||++||||+|.+.++++++++++|+|+||+++.. .+.+||||+|.||+|+++|
T Consensus 394 ~FGPvl~v~~~~~~~eai~~~n~~~~gLt~sv~s~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~~PfGG~k~SG~G~~~g 473 (499)
T d1ky8a_ 394 VFAPVASAVEVKDLDQAIELANGRPYGLDAAVFGRDVVKIRRAVRLLEVGAIYINDMPRHGIGYYPFGGRKKSGVFREGI 473 (499)
T ss_dssp CCSSEEEEEEESSHHHHHHHHHTSSEESEEEEECCCHHHHHHHHHHCCSSEEEETSCCCCTTSSSCBCCEETTEESCBST
T ss_pred ccCceEEEEEcCCHHHHHHHHhCCCCCCeEEEEcCCHHHHHHHHHhCCEeEEEEeCCCCCCCCCCCccccccCcCCCCCH
Confidence 999999999999999999999999999999999999999999999999999999998764 4689999999999999999
Q ss_pred HHHHHhhhcccEEEEeCC-CCCC
Q 015031 392 LESLHNYLQVKSVVTPIF-NSPW 413 (414)
Q Consensus 392 ~~~~~~~~~~k~i~~~~~-~~~~ 413 (414)
.+|+++||+.|+|++++. ...|
T Consensus 474 ~~~~~~~~~~k~i~~~~~~~~~~ 496 (499)
T d1ky8a_ 474 GYAVEAVTAYKTIVFNYKGKGVW 496 (499)
T ss_dssp TTTHHHHEEEEEEEEECTTSSSC
T ss_pred HHHHHHhhCEEEEEEcCCCCCCC
Confidence 999999999999999975 4555
|
| >d1euha_ c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), ALDH {Streptococcus mutans [TaxId: 1309]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: Aldehyde reductase (dehydrogenase), ALDH species: Streptococcus mutans [TaxId: 1309]
Probab=100.00 E-value=9.8e-77 Score=602.16 Aligned_cols=400 Identities=33% Similarity=0.515 Sum_probs=369.0
Q ss_pred CHHHHHHHHHhHHHHHHHHHHHcCCChHHHhhccHHHHHHHHHHHHHhhhhhcCceec------cccCccccccccCCcE
Q 015031 1 MLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLK------MSRALQGYTLREPIGV 74 (414)
Q Consensus 1 L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~~~~~~~~~~~------~~~~~~~~~~~~P~Gv 74 (414)
|+++++.|.+|+++|++++++|+||+..+ ...|+...+..++++............. ...+...+++++|+||
T Consensus 67 L~~~a~~L~~~~~~la~~~~~e~Gk~~~~-a~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~P~GV 145 (474)
T d1euha_ 67 LHKVADILMRDKEKIGAILSKEVAKGYKS-AVSEVVRTAEIINYAAEEGLRMEGEVLEGGSFEAASKKKIAVVRREPVGL 145 (474)
T ss_dssp HHHHHHHHHHTHHHHHHHHHHHHTCCHHH-HHHHHHHHHHHHHHHHHHHTTCCEEEEEGGGTCGGGTTEEEEEEEEECSE
T ss_pred HHHHHHHHHHhHHHHHHHHHHHhCCCcch-hccccchhHHHHHHHHHHHhhhhcccccccccccccCCceeEEEeeceeE
Confidence 57899999999999999999999999996 4679999999999888766543322111 1134456788999999
Q ss_pred EEEEcCCCcChHhhHHHHHHHHhcCCeEEEecCCCChhHHHHHHHHHHHcCCCCCeEEEEcCCchhHHHHHHhCCCcCeE
Q 015031 75 VGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKV 154 (414)
Q Consensus 75 v~~i~p~n~P~~~~~~~~~~ALaaGN~vv~kps~~~~~~~~~l~~~~~~aglp~g~v~~~~~~~~~~~~~l~~~~~~~~v 154 (414)
|++|+|||||+...+..+++||++||+||+|||+.+|.++..+.+++.++|+|+|++|++++++.++++.|..||+++.|
T Consensus 146 V~~I~p~n~P~~~~~~~~~~aL~aGN~vV~Kps~~~~~~~~~l~~~~~eaglP~gv~~~i~g~~~~~~~~L~~~~~v~~v 225 (474)
T d1euha_ 146 VLAISPFNYPVNLAGSKIAPALIAGNVIAFKPPTQGSISGLLLAEAFAEAGLPAGVFNTITGRGSEIGDYIVEHQAVNFI 225 (474)
T ss_dssp EEEECCTTSTTHHHHHHHHHHHHTTCEEEEECCSTTHHHHHHHHHHHHHHTCCTTTEEECCCCHHHHHHHHHHCTTCCEE
T ss_pred EEEeccccccchhhhhhchhhhhccccceecccccchHHHHHHHHHHHHhCCCcCeEEEccCChHHHHHHHHhCCCccEE
Confidence 99999999999999999999999999999999999999999999999999999999999999888899999999999999
Q ss_pred EEeCCHHHHHHHHHHHhhCCCCceeeeCCCCCceeecCCCCHHHHHHHHHHHHhcccCCccccCcEEEEeCccHHHHHHH
Q 015031 155 SFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKK 234 (414)
Q Consensus 155 ~~tGs~~~~~~i~~~~~~~~~~~~~~e~gG~~~~iV~~dadl~~a~~~i~~~~~~~~Gq~C~a~~~v~V~~~~~~~f~~~ 234 (414)
.||||..+++.+.+.++ .+|+++|+||+||+||++|||++.|++.+++++|.++||.|+++++||||++++++|++.
T Consensus 226 ~ftGs~~~~~~i~~~a~---~k~~~~e~gG~~~~iV~~dAdl~~aa~~i~~~~~~~~Gq~C~a~~~i~v~~~~~~~~~~~ 302 (474)
T d1euha_ 226 NFTGSTGIGERIGKMAG---MRPIMLELGGKDSAIVLEDADLELTAKNIIAGAFGYSGQRCTAVKRVLVMESVADELVEK 302 (474)
T ss_dssp EEESCHHHHHHHHHHTT---TSCEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCCSSSEEEEEEEHHHHHHHHHH
T ss_pred EecCccccccchhhhcc---cceEEEecCCcceEEEECCCchhhHHHHHHHHHhhCCCCccccccccchhhhhhhhhhHh
Confidence 99999999999988754 689999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhccccCCCCCCCCCccccCCHHHHHHHHHHHHHhhhcCCeEeeCCcccCCCCceeeeEEEEeCCCCCcccccccc
Q 015031 235 LVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIGKKGYYIEPTIFTNVTEDMLIAKNEIF 314 (414)
Q Consensus 235 l~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~f 314 (414)
++++...++.|++.+. ..++|.+.....+++.+.+......+...+.++. ..|+|++|||+..++++|++++||+|
T Consensus 303 l~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~g~~~~Ptvl~~~~~~~~~~~eE~f 378 (474)
T d1euha_ 303 IREKVLALTIGNPEDD-ADITPLIDTKSADYVEGLINDANDKGATALTEIK---REGNLICPILFDKVTTDMRLAWEEPF 378 (474)
T ss_dssp HHHHHHTSCBSCGGGT-CSBCCCSCHHHHHHHHHHHHHHHHTTCEECSCCC---EETTEECCEEEESCCTTSGGGTSCCC
T ss_pred hhhhhhhccccCcccc-cccccccchHHHHHHHHHHHhhhcccccccccCC---CCCCCcCCEEEecCCCcchhhhcccC
Confidence 9999999999998865 4689999999999999999999988888776554 37899999999999999999999999
Q ss_pred cceEEEeeeCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHHhccceeEEEECCcCC-CCCCCCccCCCCCCCCCcchHH
Q 015031 315 GPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSIRAGIIWINCYFA-FDSDCPYGGYKMSGFGRDCGLE 393 (414)
Q Consensus 315 gPvl~v~~~~~~~eai~~~n~~~~gl~~sv~s~d~~~~~~~~~~l~~g~v~vN~~~~-~~~~~pfgG~~~sG~g~~~g~~ 393 (414)
|||++|++|+|+||||+++|++++||+++|||+|.+.++++++++++|+|+||++.. ..+.+||||+|.||+|+++|++
T Consensus 379 gPvl~v~~~~~~deai~~~n~~~~glta~v~s~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~~pfGG~~~SG~G~~~g~~ 458 (474)
T d1euha_ 379 GPVLPIIRVTSVEEAIEISNKSEYGLQASIFTNDFPRAFGIAEQLEVGTVHINNKTQRGTDNFPFLGAKKSGAGIQGVKY 458 (474)
T ss_dssp SSEEEEEEESCHHHHHHHHHHSSEESEEEEECSCHHHHHHHHHHSCSSEEEESSCCCCCSTTSCBCCEETTEESCBSHHH
T ss_pred CcEEEEEEeCCHHHHHHHHHCCCCCCeEEEEeCCHHHHHHHHHhCCEEEEEEECCCCCCCCCCCccccccCccCccCHHH
Confidence 999999999999999999999999999999999999999999999999999999765 4567999999999999999999
Q ss_pred HHHhhhcccEEEEeC
Q 015031 394 SLHNYLQVKSVVTPI 408 (414)
Q Consensus 394 ~~~~~~~~k~i~~~~ 408 (414)
|+++||+.|+|++++
T Consensus 459 ~l~~~~~~k~v~~~~ 473 (474)
T d1euha_ 459 SIEAMTTVKSVVFDI 473 (474)
T ss_dssp HHHHTEEEEEEEEEC
T ss_pred HHHHhCcEEEEEEec
Confidence 999999999999876
|
| >d1ez0a_ c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), ALDH {Vibrio harveyi [TaxId: 669]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: Aldehyde reductase (dehydrogenase), ALDH species: Vibrio harveyi [TaxId: 669]
Probab=100.00 E-value=1.1e-69 Score=552.20 Aligned_cols=388 Identities=21% Similarity=0.287 Sum_probs=324.2
Q ss_pred CHHHHHHHHHhHHHHHHHHHHHcCCChHHHhhccHHHHHHHHHHHHHhhhhhcCceecc---------ccCccccccccC
Q 015031 1 MLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKM---------SRALQGYTLREP 71 (414)
Q Consensus 1 L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~P 71 (414)
|+++++.|++|+++|++++++|+|||..++ ..|+..+++.+++++++.++........ ..+...+..++|
T Consensus 54 L~~~a~~l~~~~~~la~~~~~e~Gkp~~~a-~~Ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P 132 (504)
T d1ez0a_ 54 LRTIASELEARSDDIIARAHLETALPEVRL-TGEIARTANQLRLFADVVNSGSYHQAILDTPNPTRAPLPKPDIRRQQIA 132 (504)
T ss_dssp HHHHHHHHHHTHHHHHHHHHHHHCCCHHHH-HHHHHHHHHHHHHHHHHHHHTGGGCEEEECCBTTCSSSCBCCEEEEEEE
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCCHHHH-HHHHHHHHHHHHHHHHHHhhhccccccccccccccccCcccceeEEEec
Confidence 578999999999999999999999999975 6899999999999998886643321110 123456678889
Q ss_pred CcEEEEEcCCCcChHhhH--HHHHHHHhcCCeEEEecCCCChhHHHHHH----HHHHHcCCCCCeEEEEcCCchhHHHHH
Q 015031 72 IGVVGHIIPWNFPTTMFF--MKVSPALAAGCTMIVKPAEQTPLIALYFA----HLAKLAGVPDGVLNVVPGFGPTAGAAI 145 (414)
Q Consensus 72 ~Gvv~~i~p~n~P~~~~~--~~~~~ALaaGN~vv~kps~~~~~~~~~l~----~~~~~aglp~g~v~~~~~~~~~~~~~l 145 (414)
+|||++|+|||||+...+ .++++||++||+||+|||+.+|.++..+. +++.++|+|+|++|+++|++.++++.|
T Consensus 133 ~GvV~~I~PwNfPl~~~~~~~~~a~ALaaGN~VVlKPs~~tp~ta~~~~~li~~a~~~aGlP~Gv~~~v~g~~~~~g~~L 212 (504)
T d1ez0a_ 133 LGPVAVFGASNFPLAFSAAGGDTASALAAGCPVIVKGHTAHPGTSQIVAECIEQALKQEQLPQAIFTLLQGNQRALGQAL 212 (504)
T ss_dssp CSCEEEECCSSCTTTTSTTSHHHHHHHHHTCCEEEECCTTCHHHHHHHHHHHHHHHHHHTCCGGGEEEECCSCTHHHHHH
T ss_pred CceEEEEecccccchhhhhhHHHHHHHHHhccceecCcccccchhhhhhhHHHHHhhhhccccCceeccccccccccccc
Confidence 999999999999996544 58999999999999999999998887765 556678999999999999888899999
Q ss_pred HhCCCcCeEEEeCCHHHHHHHHHHHhhCCCCc--eeeeCCCCCceeecCCCCHHHHH--HHHHHHHhcccCCccccCcEE
Q 015031 146 ASHMDIDKVSFTGSTDVGRQVMQAAATSNLKP--VSLELGGKSPLLIFDDVDVNTAA--DMALLGILFNKGEICVASSRV 221 (414)
Q Consensus 146 ~~~~~~~~v~~tGs~~~~~~i~~~~~~~~~~~--~~~e~gG~~~~iV~~dadl~~a~--~~i~~~~~~~~Gq~C~a~~~v 221 (414)
++||+++.|.||||+.+|+.|.+.++ ++++| +++|+|||||+||++|||++.|+ +.+++++|.|+||.|++++++
T Consensus 213 ~~~p~v~~V~FTGS~~~g~~i~~~aa-~~~~~~~l~~ElGGknp~iV~~dAd~~~Aa~~~~~~~~~~~~~GQ~C~a~~rv 291 (504)
T d1ez0a_ 213 VSHPEIKAVGFTGSVGGGRALFNLAH-ERPEPIPFYGELGAINPTFIFPSAMRAKADLADQFVASMTMGCGQFCTKPGVV 291 (504)
T ss_dssp HHCTTCCEEEEESCHHHHHHHHHHHH-HSSSCCCEEEECCCCCEEEECHHHHHHCTTHHHHHHHHHTGGGGCCTTCCCEE
T ss_pred ccccccceeeeccchHHHHHHHhhhh-cccccccccccccccccccccccccHHHHhhhhccccchhhccCccccccccc
Confidence 99999999999999999999999987 66665 55699999999999999999874 478999999999999999999
Q ss_pred EEeCccH-HHHHHHHHHHHhccccCCCCCCCCCccccCCHHHHHHHHHHHHHhhhcCCeEeeCCcccCCCCceeeeEEEE
Q 015031 222 YVQEGIY-DEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIGKKGYYIEPTIFT 300 (414)
Q Consensus 222 ~V~~~~~-~~f~~~l~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~~~g~~~~Ptvl~ 300 (414)
||+++.+ +.|++.+++.++.. ++++.+||+++..+++++ ++.+..+++.+..|+.. +.+..|+++.
T Consensus 292 ~v~~~~~~~~~~~~~~~~~~~~------~~~~~~gp~i~~~~~~~v---i~~~~~~~~~~~~~~~~----~~~~~~~~~~ 358 (504)
T d1ez0a_ 292 FALNTPETQAFIETAQSLIRQQ------SPSTLLTPGIRDSYQSQV---VSRGSDDGIDVTFSQAE----SPCVASALFV 358 (504)
T ss_dssp EEESSHHHHHHHHHHHHHHHHC------CCBCCSSHHHHHHHHHHH---HHHHTSTTEEEEECCCC----TTSBCCEEEE
T ss_pred cchhhhhHHHHhhhhhhhhhhc------ccccccccchhhhhhhhh---hhhhhhhhhhccccccc----ccccCCcccc
Confidence 9988865 46777776665542 456889999998887665 56677788888888763 3444555554
Q ss_pred e---CCCCCcccccccccceEEEeeeCCHHHHHHHHhcCCCCceEEEecC--CHHHHHHHHhccc--eeEEEECCcCC--
Q 015031 301 N---VTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTK--DLNVANTVSRSIR--AGIIWINCYFA-- 371 (414)
Q Consensus 301 ~---~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~sv~s~--d~~~~~~~~~~l~--~g~v~vN~~~~-- 371 (414)
. +..++++++||+||||++|++|+|.||||+++|+++|||++||||+ |..++.+++++|+ +|+|+||++++
T Consensus 359 ~~~~~~~~~~~~~eE~FGPvl~i~~~~~~~eai~~an~~~~gL~a~I~t~d~d~~~a~~~~~~l~~~aG~v~iN~~~tG~ 438 (504)
T d1ez0a_ 359 TSSENWRKHPAWEEEIFGPQSLIVVCENVADMLSLSEMLAGSLTATIHATEEDYPQVSQLIPRLEEIAGRLVFNGWPTGV 438 (504)
T ss_dssp EEHHHHHHCGGGGSCCCSSEEEEEEESSHHHHHHHHHTCCCEEEEEEECCGGGHHHHHHHHHHHHTTEEEEEESSCSSCC
T ss_pred ccccccccchhhcccccCCeeeeeecCCHHHHHHHHHCCCCCceEEEEecchhHHHHHHHHHHHhCCccEEEEcCCcccc
Confidence 3 3346889999999999999999999999999999999999999996 4558899999997 89999998754
Q ss_pred -----CCCCCCccCCCCCCCCCcchHHHHHhhhcccEE
Q 015031 372 -----FDSDCPYGGYKMSGFGRDCGLESLHNYLQVKSV 404 (414)
Q Consensus 372 -----~~~~~pfgG~~~sG~g~~~g~~~~~~~~~~k~i 404 (414)
..++.||||.+.||.| ..|.+++++|+++.++
T Consensus 439 ~v~~~~~~ggpf~g~~~sg~~-~~G~~~i~~f~r~v~~ 475 (504)
T d1ez0a_ 439 EVGYAMVHGGPYPASTHSAST-SVGAEAIHRWLRPVAY 475 (504)
T ss_dssp CCSSSCCCCCSTTSCSCSSCC-SSSGGGGGGGEEEEEE
T ss_pred eecCcCCCCCCCCCcCCCCCC-cchHHHHHHHhchhhh
Confidence 2245688899999855 4689999999988553
|
| >d1o20a_ c.82.1.1 (A:) Gamma-glutamyl phosphate reductase {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: Gamma-glutamyl phosphate reductase species: Thermotoga maritima [TaxId: 2336]
Probab=100.00 E-value=1.8e-58 Score=459.68 Aligned_cols=359 Identities=17% Similarity=0.149 Sum_probs=281.0
Q ss_pred CHHHHHHHHHhHHHHHHHHHHHcCCChHHHhhcc------------HHHHHHHHHHHHHhhhhhcCceeccccCcccccc
Q 015031 1 MLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGD------------IPGAANTLRYYAGAADKIHGEVLKMSRALQGYTL 68 (414)
Q Consensus 1 L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~~~~~e------------v~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 68 (414)
|++++++|++|+++|++++++|+||+..++ ..| +..+++.+++++.......+..............
T Consensus 29 L~k~a~~l~~~~~eia~~~~~e~gk~~~~~-~~e~~~~rl~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 107 (414)
T d1o20a_ 29 IKKIAEKLDERRKEILEANRIDVEKARERG-VKESLVDRLALNDKRIDEMIKACETVIGLKDPVGEVIDSWVREDGLRIA 107 (414)
T ss_dssp HHHHHHHHHHTHHHHHHHHHHHHHHHHHTT-CCHHHHHHHCCCHHHHHHHHHHHHHHHHSCCCTTCEEEEEECTTSCEEE
T ss_pred HHHHHHHHHHhHHHHHHHHHHHHhhHHhcc-ccHHHHHHHhccHHHHHHHHHHHHHHHHhhhhcccccccccccccccee
Confidence 579999999999999999999999998753 344 5566777777777555544443333344556778
Q ss_pred ccCCcEEEEEcCCCcChHhhHHHHHHHHhcCCeEEEecCCCChhHHHHHHHHHHHc----CCCCCeEEEEcCCchhHHHH
Q 015031 69 REPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLA----GVPDGVLNVVPGFGPTAGAA 144 (414)
Q Consensus 69 ~~P~Gvv~~i~p~n~P~~~~~~~~~~ALaaGN~vv~kps~~~~~~~~~l~~~~~~a----glp~g~v~~~~~~~~~~~~~ 144 (414)
++|+|+++++.|||||+...++++++||++||+||+|||+.+|.++..+++++.++ |+|.++++.+.+.+.+....
T Consensus 108 ~~~~gv~~~~~p~n~p~~~~~~~~~~alaaGN~vvlKps~~tp~~~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~ 187 (414)
T d1o20a_ 108 RVRVPIGPIGIIYESRPNVTVETTILALKSGNTILLRGGSDALNSNKAIVSAIREALKETEIPESSVEFIENTDRSLVLE 187 (414)
T ss_dssp EEEEECCCEEEECCSCTHHHHHHHHHHHHTTCCEEEECCGGGHHHHHHHHHHHHHHHTTSSSCGGGEEECCCCCTHHHHH
T ss_pred ecccccccccccccCcHHHhhhccchheecccchhcccccccccccchhhhHHHhhhhhccccccccccccccchhhhhh
Confidence 88999999999999999999999999999999999999999999999999988766 55556678887766566666
Q ss_pred HHhCCCcC-eEEEeCCHHHHHHHHHHHhhCCCCceeeeCCCCC-ceeecCCCCHHHHHHHHHHHHhcccCCccccCcEEE
Q 015031 145 IASHMDID-KVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKS-PLLIFDDVDVNTAADMALLGILFNKGEICVASSRVY 222 (414)
Q Consensus 145 l~~~~~~~-~v~~tGs~~~~~~i~~~~~~~~~~~~~~e~gG~~-~~iV~~dadl~~a~~~i~~~~~~~~Gq~C~a~~~v~ 222 (414)
+..++.+. ..+++|+. .+.+.++ +..+++.+|+||+| ++||++|||++.|++.++.++|.| ||.|+++++++
T Consensus 188 ~~~~~~~~~~~~~~~~~----~v~~~a~-~~~~~~~le~gGgn~~viv~~dAd~~~A~~~~~~~~~~~-gq~C~a~~r~~ 261 (414)
T d1o20a_ 188 MIRLREYLSLVIPRGGY----GLISFVR-DNATVPVLETGVGNCHIFVDESADLKKAVPVIINAKTQR-PGTCNAAEKLL 261 (414)
T ss_dssp HTTCTTTCSEEEECSCH----HHHHHHH-HHCSSCBCCCCCCCEEEEECTTSCHHHHHHHHHHHHHSC-TTSTTSEEEEE
T ss_pred cccccccCeEEEcccHH----HHHHHhh-hccccceecccCCCCCeecccccchhhhhhHHHhhhhcC-Ccccccccccc
Confidence 66554443 33444443 4444444 44566677777655 578889999999999999999876 99999999999
Q ss_pred EeCccHHHHHHHHHHHHhccccCCCCCCCCCccccCCHHHHHHHHHHHHHhhhcCCeEeeCCcccCCCCceeeeEEEEeC
Q 015031 223 VQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIGKKGYYIEPTIFTNV 302 (414)
Q Consensus 223 V~~~~~~~f~~~l~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~~~g~~~~Ptvl~~~ 302 (414)
||+++||+|+++|.+...+..++.+.++ .. ... .+.+...
T Consensus 262 V~~~i~d~f~~~l~~~~~~~~~~~~~~~----------~~----~~~-------------------------~~~~~~~- 301 (414)
T d1o20a_ 262 VHEKIAKEFLPVIVEELRKHGVEVRGCE----------KT----REI-------------------------VPDVVPA- 301 (414)
T ss_dssp EEHHHHHHHHHHHHHHHHHTTCEEEECH----------HH----HHH-------------------------STTSEEC-
T ss_pred hhHHHHHHHHHHHhHHHHHcCCccccch----------hh----hhh-------------------------cccceec-
Confidence 9999999999999999888655443221 10 000 0011111
Q ss_pred CCCCcccccccccceEEEeeeCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHHhccceeEEEECCcCCCCCCCCccCCC
Q 015031 303 TEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSIRAGIIWINCYFAFDSDCPYGGYK 382 (414)
Q Consensus 303 ~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~sv~s~d~~~~~~~~~~l~~g~v~vN~~~~~~~~~pfgG~~ 382 (414)
....+++|+||||++|++|+|+||||+++|+++|||++||||+|.++++++++++++|.|+||+++.+....|||+.+
T Consensus 302 --~~~~~~~E~FgPvl~v~~~~~~dEAI~~aN~~~yGLsa~I~T~d~~~a~~~~~~i~~G~V~IN~~~~~~~~~~~g~g~ 379 (414)
T d1o20a_ 302 --TEDDWPTEYLDLIIAIKVVKNVDEAIEHIKKYSTGHSESILTENYSNAKKFVSEIDAAAVYVNASTRFTDGGQFGFGA 379 (414)
T ss_dssp --CGGGTTCCCCSSEEEEEEESSHHHHHHHHHHHCCSSEEEEECSCHHHHHHHHHHCCSSEEEESSCGGGCSTTTTTCSC
T ss_pred --ccccCCceeeeeEEEEEEeCCHHHHHHHHhcCCCCCcEEEEeCCHHHHHHHHHhCCeeEEEEeCCCcCCCCCCCCCCC
Confidence 123467999999999999999999999999999999999999999999999999999999999987655566777666
Q ss_pred CCCCC--Ccc--hHHHHHhhhcccEEEEeC
Q 015031 383 MSGFG--RDC--GLESLHNYLQVKSVVTPI 408 (414)
Q Consensus 383 ~sG~g--~~~--g~~~~~~~~~~k~i~~~~ 408 (414)
.+|+| +.+ |++|+++||+.|+|+++.
T Consensus 380 ~~G~~~~~~~~~G~~gl~~~t~~K~vv~~~ 409 (414)
T d1o20a_ 380 EIGISTQRFHARGPVGLRELTTYKFVVLGE 409 (414)
T ss_dssp CSCEECSSSSCCEECCTGGGEEEEEEEECS
T ss_pred ceeccCCCCCCCchhHHHHhCeEEEEEECC
Confidence 66653 333 899999999999998754
|
| >d1vlua_ c.82.1.1 (A:) Gamma-glutamyl phosphate reductase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: Gamma-glutamyl phosphate reductase species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=100.00 E-value=3.5e-48 Score=384.93 Aligned_cols=373 Identities=17% Similarity=0.169 Sum_probs=256.4
Q ss_pred CHHHHHHHHHhHHHHHHHHHH------HcCCChHHH-h--hc---cHHHHHHHHHHHHHhhhhhcCce---eccccCccc
Q 015031 1 MLKFADLIEEHAEVLAVLEAL------DAGKLHSWA-K--MG---DIPGAANTLRYYAGAADKIHGEV---LKMSRALQG 65 (414)
Q Consensus 1 L~~~a~~l~~~~~~l~~~~~~------e~Gk~~~~~-~--~~---ev~~~~~~l~~~~~~~~~~~~~~---~~~~~~~~~ 65 (414)
|+++++.|++|+++|.++..+ +.|++.... + .. .+...++.++..+...++. +.. ...+.+...
T Consensus 31 L~~~a~~L~~~~~eI~~aN~~Dl~~a~~~g~~~~~idRL~l~~~~ri~~~~~~l~~i~~~~dpv-g~~~~~~~~~~gl~~ 109 (436)
T d1vlua_ 31 LYKIHDALKANAHAIEEANKIDLAVAKETGLADSLLKRLDLFKGDKFEVMLQGIKDVAELEDPV-GKVKMARELDDGLTL 109 (436)
T ss_dssp HHHHHHHHHHTHHHHHHHHHHHHHHHHHSSCCHHHHHHHCTTSTTHHHHHHHHHHHHHHSCCSS-SCEEEEEEEETTEEE
T ss_pred HHHHHHHHHHCHHHHHHHHHHHHHHHHHcCCcHHHHHHHhcCchHHHHHHHHHHHHHHhccccc-eeEeeeeeccccceE
Confidence 578999999999999886444 456553311 0 11 1445555566555443332 221 122356667
Q ss_pred cccccCCcEEEEEcCCCcChHhhHHHHHHHHhcCCeEEEecCCCChhHHHHHHHHH--------HHcCCCCCeEEEEcCC
Q 015031 66 YTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLA--------KLAGVPDGVLNVVPGF 137 (414)
Q Consensus 66 ~~~~~P~Gvv~~i~p~n~P~~~~~~~~~~ALaaGN~vv~kps~~~~~~~~~l~~~~--------~~aglp~g~v~~~~~~ 137 (414)
+..+.|+||+++| |+++| ..++...+.||++||+||+||++.++.++..+.+++ .++|+|+++++++++
T Consensus 110 ~~~~~P~GVigiI-~e~~P-~vt~~~~~lalksGNavIlk~~~~a~~s~~~l~~~~~~al~~a~~~aGlP~~~i~~v~~- 186 (436)
T d1vlua_ 110 YQVTAPVGVLLVI-FESRP-EVIANITALSIKSGNAAILKGGKESVNTFREMAKIVNDTIAQFQSETGVPVGSVQLIET- 186 (436)
T ss_dssp EEEEEECCEEEEE-ESSCT-HHHHHHHHHHHHHTCEEEEECCGGGHHHHHHHHHHHHHHHHHHHHHHCCCTTSEEECCC-
T ss_pred EEeeeeeeeeecc-ccccc-hhhhhhhhcccccCCcceecCCcccccCHHHHHHHHHHhhhhhccccCCCCceEEEecc-
Confidence 7888999999998 66778 566778899999999999999999999988876665 467999999999987
Q ss_pred chhHHHHHHhCCCcCeEEEeCCHHHHHHHHHHHhhCCCCceeeeCCCCCceeecCCCCHHHHHHHHHHHHhcccCCcccc
Q 015031 138 GPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVA 217 (414)
Q Consensus 138 ~~~~~~~l~~~~~~~~v~~tGs~~~~~~i~~~~~~~~~~~~~~e~gG~~~~iV~~dadl~~a~~~i~~~~~~~~Gq~C~a 217 (414)
..++++.|..|+.+|.|+||||...++.+.+. ...|++.+++|++|+||++|||++.|++.++.++|.++|| |.+
T Consensus 187 ~~~v~~~l~~~~~Id~ii~tGg~~lv~~v~~~----~~~pvi~~~~G~~~~~Vd~~ADl~~A~~~i~~ak~~~~g~-C~a 261 (436)
T d1vlua_ 187 RQDVSDLLDQDEYIDLVVPRGSNALVRKIKDT----TKIPVLGHADGICSIYLDEDADLIKAKRISLDAKTNYPAG-CNA 261 (436)
T ss_dssp C--CGGGGGCTTTCCEEEEESCHHHHHHHHHT----CCSCBTTBCSCCEEEEECTTCCHHHHHHHHHHTTCC-----CCC
T ss_pred hhHHHHHhccCCCCceEEEecCCceeeeeecc----ccceEEEecCCccceeecccccHHHHHHHHHHHhccCCCc-ccc
Confidence 45788999999999999999999988877554 2369999999999999999999999999999999999986 889
Q ss_pred CcEEEEeCccHHHHHHHHHHHHhccccCCCCCCCCCccccCCHHHHHHHHHHHHHhhhcCCeEeeCCcccCCCCceeeeE
Q 015031 218 SSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIGKKGYYIEPT 297 (414)
Q Consensus 218 ~~~v~V~~~~~~~f~~~l~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~~~g~~~~Pt 297 (414)
.++++||+++++.|...+...... |. .+. .++.. .....+..... +.. .+....|+
T Consensus 262 ~e~llV~e~ia~~~~~~~~~~~~~---gv------~l~--~~~~~----~~~~~~~~~~~------~~~---~~~~~~~~ 317 (436)
T d1vlua_ 262 METLLINPKFSKWWEVLENLTLEG---GV------TIH--ATKDL----KTAYFDKLNEL------GKL---TEAIQCKT 317 (436)
T ss_dssp CEEEEECTTSTTHHHHHHHHHHHH---CC------CBE--ECHHH----HHHHHHHHHHH------TCC---CHHHHTTB
T ss_pred ccceeecHhhhhhhhhhHHHHHhC---Cc------EEE--eCHHH----HHHhhhhhhhc------ccc---cccccccc
Confidence 999999999998886655444333 11 010 11211 12222111111 110 12222333
Q ss_pred EEEeCCCCCcccccccccceEEEeeeCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHHhccceeEEEECCcCCCCCCCC
Q 015031 298 IFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSIRAGIIWINCYFAFDSDCP 377 (414)
Q Consensus 298 vl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~sv~s~d~~~~~~~~~~l~~g~v~vN~~~~~~~~~p 377 (414)
+....+.+ +.+|.|+|+++|++++|+||||+++|+.++||+++|||+|.+.+++|++++++|.|+||.++.+.++.+
T Consensus 318 ~~~~~~~d---~~~E~l~pvl~v~~v~~~eEAI~~in~~g~ghta~I~T~d~~~a~~F~~~vda~~V~vNasTrf~Dg~~ 394 (436)
T d1vlua_ 318 VDADEEQD---FDKEFLSLDLAAKFVTSTESAIQHINTHSSRHTDAIVTENKANAEKFMKGVDSSGVYWNASTRFADGFR 394 (436)
T ss_dssp C----------------CCCCEEEECCSHHHHHHHHTTSCSSCEEEEECSCHHHHHHHHHHCCCSEEEESSCGGGCC---
T ss_pred cCCCcccc---hhhhhhCcceeEEEECCHHHHHHHHHHhCCCCceEEEECCHHHHHHHHHhCCceEEEEcCCCccCCCCc
Confidence 33222223 579999999999999999999999999999999999999999999999999999999999998887777
Q ss_pred ccCCCCCCC--C--CcchHHHHHhhhcccEEEEeCC
Q 015031 378 YGGYKMSGF--G--RDCGLESLHNYLQVKSVVTPIF 409 (414)
Q Consensus 378 fgG~~~sG~--g--~~~g~~~~~~~~~~k~i~~~~~ 409 (414)
||--.+-|+ + ...|+.|++.+|..|++....+
T Consensus 395 ~g~g~e~Gist~k~h~rGp~gl~~ltt~k~~~~g~g 430 (436)
T d1vlua_ 395 YGFGAEVGISTSKIHARGPVGLDGLVSYQYQIRGDG 430 (436)
T ss_dssp -------------------CCSGGGEEEEEEEECSS
T ss_pred ccCcceeeEecCCCCCCCCcChHHhceEEEEEECCC
Confidence 763223333 2 3469999999999999887543
|
| >d1k75a_ c.82.1.2 (A:) L-histidinol dehydrogenase HisD {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: L-histidinol dehydrogenase HisD domain: L-histidinol dehydrogenase HisD species: Escherichia coli [TaxId: 562]
Probab=97.67 E-value=0.015 Score=54.42 Aligned_cols=259 Identities=18% Similarity=0.178 Sum_probs=154.3
Q ss_pred ccCccccccccCCcEEEEEcCCC---cChHhhHHHHHHHHhcCCeEE--EecCCCChhHHHHHHHHHHHcCCCCCeEEEE
Q 015031 60 SRALQGYTLREPIGVVGHIIPWN---FPTTMFFMKVSPALAAGCTMI--VKPAEQTPLIALYFAHLAKLAGVPDGVLNVV 134 (414)
Q Consensus 60 ~~~~~~~~~~~P~Gvv~~i~p~n---~P~~~~~~~~~~ALaaGN~vv--~kps~~~~~~~~~l~~~~~~aglp~g~v~~~ 134 (414)
..|.....++.|+--|++..|.- ||-..+| ..+||-.||..=| ..|+...|. +.-+...+|..+ +.
T Consensus 109 ~~Gv~~g~~~~PI~~VGlYVPGG~A~ypSsvLM-~aiPAkvAGV~~Ivv~tPp~~~~~----~l~aa~~~Gv~~----iy 179 (431)
T d1k75a_ 109 QPGVRCQQVTRPVASVGLYIPGGSAPLFSTVLM-LATPASIAGCKKVVLCSPPPIADE----ILYAAQLCGVQD----VF 179 (431)
T ss_dssp ETTEEEEEEEEECSEEEEECCCSSSCCHHHHHH-HHHHHHHHTCSEEEEEECSSCCHH----HHHHHHHTTCCE----EE
T ss_pred cCCceeeeeeeehhhheeeccCCCccchHHHHH-HHHHHHhcCCCceeEEeCCCCcch----HHHHHHHcCccc----eE
Confidence 35667778889999999999966 5554444 5789999997644 555544442 334445566653 22
Q ss_pred cCCchhHHHHHHh----CCCcCeEEEeCCHHHHHHHHHHHhhCCCCceeeeCCCCCc--eeecCCCCHHHHHHHHHHHHh
Q 015031 135 PGFGPTAGAAIAS----HMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSP--LLIFDDVDVNTAADMALLGIL 208 (414)
Q Consensus 135 ~~~~~~~~~~l~~----~~~~~~v~~tGs~~~~~~i~~~~~~~~~~~~~~e~gG~~~--~iV~~dadl~~a~~~i~~~~~ 208 (414)
.-.|.....+|.- -|.+|.|+=.|+.-+..+=.+..+ ....--+=-..|.+= +|-++++|.+.++.+++.-+=
T Consensus 180 ~~GGaqAIAAlAyGT~ti~~VdkI~GPGN~yV~~AK~~v~g-~~~~vgID~~aGPSEv~viAD~~a~p~~iAaDllaQAE 258 (431)
T d1k75a_ 180 NVGGAQAIAALAFGTESVPKVDKIFGPGNAFVTEAKRQVSQ-RLDGAAIDMPAGPSEVLVIADSGATPDFVASDLLSQAE 258 (431)
T ss_dssp ECCHHHHHHHHHHCCSSSCCCSEEECCCSHHHHHHHHHHHH-STTSCEESCCCCCCEEEEEECTTSCHHHHHHHHHHHHT
T ss_pred ecCChHHHHHHhhccCcccccceeecCCchhhhhhHHhhcc-cCCccccccccCCceEEEEecCCCCHHHHHHHHHhccC
Confidence 2224444444443 578999999999876553333322 111111111233333 344667899999999887765
Q ss_pred cccCCccccCcEEEEeCc--cHHHHHHHHHHHHhccccCCCCCCCCCccccCCHHHHHHHHHHHHHhhhcCCeEeeCCcc
Q 015031 209 FNKGEICVASSRVYVQEG--IYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKP 286 (414)
Q Consensus 209 ~~~Gq~C~a~~~v~V~~~--~~~~f~~~l~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ga~v~~gg~~ 286 (414)
+...- +.++|..+ ..+++.+.+.++++.+. . . +.++....
T Consensus 259 H~~~a-----~~ilvt~~~~l~~~v~~~i~~~l~~l~----r-----------~-------~i~~~s~~----------- 300 (431)
T d1k75a_ 259 HGPDS-----QVILLTPAADMARRVAEAVERQLAELP----R-----------A-------ETARQALN----------- 300 (431)
T ss_dssp TCTTC-----EEEEEESCHHHHHHHHHHHHHHHHTCS----S-----------C-------HHHHHHHT-----------
T ss_pred Ccccc-----eeEEEeccHHHHHHHHHHHHHHhhhch----H-----------H-------HHHHhhhc-----------
Confidence 55542 34666655 34555555555555431 0 0 01111110
Q ss_pred cCCCCceeeeEEEEeCCCCCcccccccccceEEEeeeCCHHHHHHHHhcCCCCceEEEecCCHHHHHHHHhcc-ceeEEE
Q 015031 287 IGKKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRYGLAAGIMTKDLNVANTVSRSI-RAGIIW 365 (414)
Q Consensus 287 ~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~sv~s~d~~~~~~~~~~l-~~g~v~ 365 (414)
.. .++.++|++||++++|..- +-...|.++|+. ++..++ .+|.|+
T Consensus 301 --------------------------~~----~ii~v~~~~ea~~~~N~~A-PEHL~l~~~~~~---~~~~~i~nAGsIf 346 (431)
T d1k75a_ 301 --------------------------AS----RLIVTKDLAQCVEISNQYG-PEHLIIQTRNAR---ELVDSITSAGSVF 346 (431)
T ss_dssp --------------------------TC----EEEECSSHHHHHHHHHHHC-CSEEEEESTTHH---HHGGGCCCCSEEE
T ss_pred --------------------------cc----eEEEecCHHHHHHHHHhhh-HHHHHHHhcCHH---HHHhhhhhcchhh
Confidence 11 1345799999999999842 235678888874 466666 489999
Q ss_pred ECCcCC---------CCCCCCccCCCCCCCCCcchHHHHHhhhcccEEE
Q 015031 366 INCYFA---------FDSDCPYGGYKMSGFGRDCGLESLHNYLQVKSVV 405 (414)
Q Consensus 366 vN~~~~---------~~~~~pfgG~~~sG~g~~~g~~~~~~~~~~k~i~ 405 (414)
+..+.. .++-+|-|| .+++.+.-+...|+++.++.
T Consensus 347 lG~~sp~a~GDY~aGpnHvLPT~G-----~Ar~~sgLsv~dF~k~~s~~ 390 (431)
T d1k75a_ 347 LGDWSPESAGDYASGTNHVLPTYG-----YTATCSSLGLADFQKRMTVQ 390 (431)
T ss_dssp ESTTCCHHHHHHTSSSCCCCCCTT-----GGGTCCCCCGGGGEEEEEEE
T ss_pred cCCCCcchhhccccCCCccCCCCC-----ceeecCCCCHHHeeeeeeEE
Confidence 988653 345667655 44555555678888876654
|