Citrus Sinensis ID: 015036
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
|---|
Close Homologs for Annotation Transfer
Close Homologs in the Non-Redundant Database Detected by BLAST 
Original result of BLAST against Nonredundant Database
GI ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 414 | ||||||
| 224056557 | 415 | predicted protein [Populus trichocarpa] | 0.995 | 0.992 | 0.820 | 0.0 | |
| 147789428 | 418 | hypothetical protein VITISV_017558 [Viti | 0.997 | 0.988 | 0.760 | 0.0 | |
| 359493609 | 795 | PREDICTED: uncharacterized protein LOC10 | 0.971 | 0.505 | 0.769 | 0.0 | |
| 356514597 | 420 | PREDICTED: uncharacterized protein LOC10 | 0.980 | 0.966 | 0.768 | 0.0 | |
| 449439061 | 415 | PREDICTED: uncharacterized protein LOC10 | 0.997 | 0.995 | 0.723 | 0.0 | |
| 302142917 | 397 | unnamed protein product [Vitis vinifera] | 0.946 | 0.987 | 0.729 | 0.0 | |
| 297842053 | 413 | hypothetical protein ARALYDRAFT_316264 [ | 0.973 | 0.975 | 0.718 | 1e-177 | |
| 145337478 | 413 | uncharacterized protein [Arabidopsis tha | 0.973 | 0.975 | 0.727 | 1e-177 | |
| 116831019 | 414 | unknown [Arabidopsis thaliana] | 0.973 | 0.973 | 0.727 | 1e-177 | |
| 12324320 | 403 | hypothetical protein; 63994-65574 [Arabi | 0.968 | 0.995 | 0.709 | 1e-168 |
| >gi|224056557|ref|XP_002298909.1| predicted protein [Populus trichocarpa] gi|222846167|gb|EEE83714.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
Score = 731 bits (1887), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 338/412 (82%), Positives = 378/412 (91%)
Query: 3 QPWLDRRIQSLFPVALVSVLIVGTTRLFLDNLKSYDSKIFEFYGEPERYKQRRPVFVSPK 62
+P LDRRIQ+LFPVAL +L++GT RL LD+LKS S IF YG E + ++PVFV P+
Sbjct: 4 KPSLDRRIQTLFPVALACLLVLGTARLVLDSLKSNQSSIFRVYGRQEGGEYKKPVFVLPE 63
Query: 63 DRFEESCNVFEGKWIWDNVTYPLYSEESCPYLVKQTTCQRNGRPDSFYQNWRWQPDGCKL 122
DRFE+ C+VFEG+W+WDNV+ PLY+EESCPYLVKQTTCQRNGRPDSFYQ+WRWQP CKL
Sbjct: 64 DRFEKGCDVFEGQWVWDNVSRPLYTEESCPYLVKQTTCQRNGRPDSFYQDWRWQPHACKL 123
Query: 123 PRFDPLKLLDILRGKRLMFIGDSVQRGQFESMVCMVQSVIPEGKKSFHRIPPMKIFKAEE 182
PRFDPLKLLD+LRGKRLMFIGDSVQRGQFESMVCMVQSVIP+GKKSFHRIPPMKIFKAEE
Sbjct: 124 PRFDPLKLLDVLRGKRLMFIGDSVQRGQFESMVCMVQSVIPDGKKSFHRIPPMKIFKAEE 183
Query: 183 YNASIEYYWAPFIVESISDHATNHTVLKRLVDLDSIAKHGKSWQGVDVLVFESYVWWMYK 242
YNASIEYYWAPFIVESISDHATNHTVLKRLV+LDSIAKHGKSW+GVDVLVFESYVWWMYK
Sbjct: 184 YNASIEYYWAPFIVESISDHATNHTVLKRLVNLDSIAKHGKSWEGVDVLVFESYVWWMYK 243
Query: 243 PTINATYGSADDIKEYNVTTAYRLAFETWANWLESSINPLTQKVYFMSMSPTHLWSWEWK 302
P INAT+GS DDI+EYNVTTAY+LA ETWA WLES+IN + QKV+FMSMSPTHLWSWEW+
Sbjct: 244 PLINATHGSTDDIQEYNVTTAYKLALETWAKWLESNINSIKQKVFFMSMSPTHLWSWEWR 303
Query: 303 PGSNENCFNESYPIQGSYWGTGSSLTIMKIVQDILQELKIDVTFLNITQLSEYRKDAHTS 362
PGS+E+CFNESYPI+G YWGTGS+L IMKIV DIL+E KI+VTFLNITQLSEYRKD HT+
Sbjct: 304 PGSDESCFNESYPIEGPYWGTGSNLQIMKIVDDILRESKINVTFLNITQLSEYRKDGHTT 363
Query: 363 VYGERKGKLLTKKQRSDPKNFADCIHWCLPGVPDTWNEILYAHLLQNHRNLL 414
+YGERKGKLLTK+QRSDPK FADCIHWCLPGVPD WNEILYA+LLQNH+N +
Sbjct: 364 IYGERKGKLLTKEQRSDPKKFADCIHWCLPGVPDAWNEILYAYLLQNHQNFM 415
|
Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|147789428|emb|CAN66611.1| hypothetical protein VITISV_017558 [Vitis vinifera] | Back alignment and taxonomy information |
|---|
| >gi|359493609|ref|XP_002283037.2| PREDICTED: uncharacterized protein LOC100252035 [Vitis vinifera] | Back alignment and taxonomy information |
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| >gi|356514597|ref|XP_003525992.1| PREDICTED: uncharacterized protein LOC100804200 [Glycine max] | Back alignment and taxonomy information |
|---|
| >gi|449439061|ref|XP_004137306.1| PREDICTED: uncharacterized protein LOC101210661 [Cucumis sativus] gi|449483306|ref|XP_004156551.1| PREDICTED: uncharacterized LOC101210661 [Cucumis sativus] | Back alignment and taxonomy information |
|---|
| >gi|302142917|emb|CBI20212.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
|---|
| >gi|297842053|ref|XP_002888908.1| hypothetical protein ARALYDRAFT_316264 [Arabidopsis lyrata subsp. lyrata] gi|297334749|gb|EFH65167.1| hypothetical protein ARALYDRAFT_316264 [Arabidopsis lyrata subsp. lyrata] | Back alignment and taxonomy information |
|---|
| >gi|145337478|ref|NP_177457.2| uncharacterized protein [Arabidopsis thaliana] gi|91806077|gb|ABE65767.1| hypothetical protein At1g73140 [Arabidopsis thaliana] gi|332197297|gb|AEE35418.1| uncharacterized protein [Arabidopsis thaliana] | Back alignment and taxonomy information |
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| >gi|116831019|gb|ABK28465.1| unknown [Arabidopsis thaliana] | Back alignment and taxonomy information |
|---|
| >gi|12324320|gb|AAG52129.1|AC010556_11 hypothetical protein; 63994-65574 [Arabidopsis thaliana] | Back alignment and taxonomy information |
|---|
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST 
Original result of BLAST against Gene Ontology (AMIGO)
ID ![]() |
Alignment graph ![]() |
Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 414 | ||||||
| TAIR|locus:2179172 | 434 | TBL3 "TRICHOME BIREFRINGENCE-L | 0.939 | 0.896 | 0.471 | 1.6e-102 | |
| TAIR|locus:2065069 | 424 | TBL28 "TRICHOME BIREFRINGENCE- | 0.823 | 0.804 | 0.504 | 1.3e-100 | |
| TAIR|locus:2082078 | 487 | ESK1 "ESKIMO 1" [Arabidopsis t | 0.905 | 0.770 | 0.454 | 3.9e-99 | |
| TAIR|locus:2063125 | 425 | TBL33 "AT2G40320" [Arabidopsis | 0.857 | 0.835 | 0.464 | 3.4e-93 | |
| TAIR|locus:2057145 | 410 | TBL34 "AT2G38320" [Arabidopsis | 0.821 | 0.829 | 0.477 | 1.1e-89 | |
| TAIR|locus:2080280 | 379 | TBL36 "AT3G54260" [Arabidopsis | 0.794 | 0.868 | 0.405 | 6.5e-67 | |
| TAIR|locus:2096094 | 475 | TBL6 "AT3G62390" [Arabidopsis | 0.794 | 0.692 | 0.372 | 1.3e-66 | |
| TAIR|locus:2149947 | 485 | TBL5 "AT5G20590" [Arabidopsis | 0.794 | 0.678 | 0.386 | 1.7e-66 | |
| TAIR|locus:2088659 | 556 | TBL1 "AT3G12060" [Arabidopsis | 0.847 | 0.631 | 0.378 | 5.8e-66 | |
| TAIR|locus:2170184 | 608 | TBR [Arabidopsis thaliana (tax | 0.804 | 0.547 | 0.370 | 1.2e-63 |
| TAIR|locus:2179172 TBL3 "TRICHOME BIREFRINGENCE-LIKE 3" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1016 (362.7 bits), Expect = 1.6e-102, P = 1.6e-102
Identities = 188/399 (47%), Positives = 265/399 (66%)
Query: 16 VALVSVLIVGTTRLFLDNLKSYDSKIFEFYGEPERYKQRRPVFVSPKDRFE---ESCNVF 72
++L+S ++ F LKS K + + K+R + DRFE E CNV
Sbjct: 38 ISLLSSSSSSSSSFF--KLKSCPRKDVSSKPKEKIRKERSEILEVLDDRFEFDPEECNVA 95
Query: 73 EGKWIWDNVTYPLYSEESCPYLVKQTTCQRNGRPDSFYQNWRWQPDGCKLPRFDPLKLLD 132
GKW++++ PLY++ SCPY+ +Q +C +NG+P++ Y W WQPD C +PRF P ++
Sbjct: 96 AGKWVYNSSIEPLYTDRSCPYIDRQFSCMKNGQPETDYLRWEWQPDDCTIPRFSPKLAMN 155
Query: 133 ILRGKRLMFIGDSVQRGQFESMVCMVQSVIPEGKKSFHRIPPMKIFKAEEYNASIEYYWA 192
LRGKRL+F+GDS+QR Q+ES VC+V+S+IPEG+KS R +FKA+EYNA+IE+YWA
Sbjct: 156 KLRGKRLLFVGDSLQRSQWESFVCLVESIIPEGEKSMKRSQKYFVFKAKEYNATIEFYWA 215
Query: 193 PFIVESISDHATNHTVLKRLVDLDSIAKHGKSWQGVDVLVFESYVWWMYKPTINATYGSA 252
P+IVES +D KR+V +DS+ K W+G D+LVF +YVWWM + A +GS
Sbjct: 216 PYIVESNTDIPVISDPKKRIVKVDSVKDRAKFWEGADILVFNTYVWWMSGLRMKALWGSF 275
Query: 253 DD----IKEYNVTTAYRLAFETWANWLESSINPLTQKVYFMSMSPTHLWSWEWKPGSNEN 308
+ + + AYRL +TWANW++S+++P +V+F +MSPTH S +W +
Sbjct: 276 GNGESGAEALDTQVAYRLGLKTWANWVDSTVDPNKTRVFFTTMSPTHTRSADWGKPNGTK 335
Query: 309 CFNESYPIQGS-YWGTGSSLTIMKIVQDILQELKIDVTFLNITQLSEYRKDAHTSVYGER 367
CFNE+ PI+ +WGTGS+ +MK+V +++ + VT +NITQLSEYR DAHTSVY E
Sbjct: 336 CFNETKPIKDKKFWGTGSNKQMMKVVSSVIKHMTTHVTVINITQLSEYRIDAHTSVYTET 395
Query: 368 KGKLLTKKQRSDPKNFADCIHWCLPGVPDTWNEILYAHL 406
GK+LT +QR+DP + ADCIHWCLPG+PDTWN IL AHL
Sbjct: 396 GGKILTAEQRADPMHHADCIHWCLPGLPDTWNRILLAHL 434
|
|
| TAIR|locus:2065069 TBL28 "TRICHOME BIREFRINGENCE-LIKE 28" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2082078 ESK1 "ESKIMO 1" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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| TAIR|locus:2063125 TBL33 "AT2G40320" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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| TAIR|locus:2057145 TBL34 "AT2G38320" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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| TAIR|locus:2080280 TBL36 "AT3G54260" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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| TAIR|locus:2096094 TBL6 "AT3G62390" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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| TAIR|locus:2149947 TBL5 "AT5G20590" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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| TAIR|locus:2088659 TBL1 "AT3G12060" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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| TAIR|locus:2170184 TBR [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Ezypred Server 
Original result from Ezypred Server
Fail to connect to Ezypred Server
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING 
Original result from the STRING server
Fail to connect to STRING server
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against CDD database part I
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 414 | |||
| pfam13839 | 270 | pfam13839, PC-Esterase, GDSL/SGNH-like Acyl-Estera | 1e-102 | |
| PLN02629 | 387 | PLN02629, PLN02629, powdery mildew resistance 5 | 5e-87 | |
| pfam14416 | 55 | pfam14416, PMR5N, PMR5 N terminal Domain | 3e-26 |
| >gnl|CDD|222410 pfam13839, PC-Esterase, GDSL/SGNH-like Acyl-Esterase family found in Pmr5 and Cas1p | Back alignment and domain information |
|---|
Score = 304 bits (781), Expect = e-102
Identities = 119/289 (41%), Positives = 165/289 (57%), Gaps = 23/289 (7%)
Query: 122 LPRFDPLKLLDILRGKRLMFIGDSVQRGQFESMVCMVQSVIPEGKKSFHRIPPMKIFKAE 181
LPRFD + L+ LRGKR++F+GDS+ R Q+ES+VC++ V P K+ R + F+ +
Sbjct: 1 LPRFDAQQFLERLRGKRVVFVGDSLSRNQWESLVCLLSQVEPPKGKTLERDGRLFRFRFK 60
Query: 182 EYNASIEYYWAPFIVESISDHATNHTVLKRLVDLDSI-AKHGKSWQGVDVLVFESYVWWM 240
+YN +IE+YW+PF+VES N KR++ LDSI K K W G DVLVF S WW+
Sbjct: 61 DYNVTIEFYWSPFLVESD-----NAEEGKRVLKLDSIDEKWSKLWPGADVLVFNSGHWWL 115
Query: 241 YKPTINAT-YGSADDIKEYNVTTAYRLAFETWANWLESSINPLTQKVYFMSMSPTHLWSW 299
++ Y + KE AYR A ETWA W++ ++ P +V+F + SP H
Sbjct: 116 HRKVYIGWDYCQKSNYKEMGFLDAYRKALETWAKWVDVNLPPSKTRVFFRTFSPVHFEGG 175
Query: 300 EWKPGSNENCFNESYPIQGSYWGTGSSLTIMKIVQDILQ--ELKIDVTFLNITQLSEYRK 357
EW G +C E+ P+ GS G + ++ IV ++L +K V L+IT LS+YRK
Sbjct: 176 EWNTGG--SC-YETEPLLGS-EYKGLTPEMIDIVNEVLSRAAMKTPVKLLDITLLSQYRK 231
Query: 358 DAHTSVYGERKGKLLTKKQRSDPKNFADCIHWCLPGVPDTWNEILYAHL 406
D H SVY + DC+HWCLPGVPDTWNE+L A L
Sbjct: 232 DGHPSVYRKPGPPKKE----------QDCLHWCLPGVPDTWNELLLALL 270
|
The PC-Esterase family is comprised of Cas1p, the Homo sapiens C7orf58, Arabidopsis thaliana PMR5 and a group of plant freezing resistance/coldacclimatization proteins typified by Arabidopsis thaliana ESKIMO1, animal FAM55D proteins, and animal FAM113 proteins. The PC-Esterase family has features that are both similar and different from the canonical GDSL/SGNH superfamily. The members of this family are predicted to have Acyl esterase activity and predicted to modify cell-surface biopolymers such as glycans and glycoproteins. The Cas1p protein has a Cas1_AcylT domain, in addition, with the opposing acyltransferase activity. The C7orf58 family has a ATP-Grasp domain fused to the PC-Esterase and is the first identified secreted tubulin-tyrosine ligase like enzyme in eukaryotes. The plant family with PMR5, ESK1, TBL3 etc have a N-terminal C rich potential sugar binding domain followed by the PC-Esterase domain. Length = 270 |
| >gnl|CDD|215338 PLN02629, PLN02629, powdery mildew resistance 5 | Back alignment and domain information |
|---|
| >gnl|CDD|206583 pfam14416, PMR5N, PMR5 N terminal Domain | Back alignment and domain information |
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Conserved Domains Detected by HHsearch 
Original result of HHsearch against CDD database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 414 | |||
| PLN02629 | 387 | powdery mildew resistance 5 | 100.0 | |
| PF13839 | 263 | PC-Esterase: GDSL/SGNH-like Acyl-Esterase family f | 100.0 | |
| PF14416 | 55 | PMR5N: PMR5 N terminal Domain | 99.91 | |
| cd01842 | 183 | SGNH_hydrolase_like_5 SGNH_hydrolase subfamily. SG | 98.41 | |
| cd01841 | 174 | NnaC_like NnaC (CMP-NeuNAc synthetase) _like subfa | 95.61 | |
| cd01838 | 199 | Isoamyl_acetate_hydrolase_like Isoamyl-acetate hyd | 94.82 | |
| cd01829 | 200 | SGNH_hydrolase_peri2 SGNH_peri2; putative periplas | 94.55 | |
| cd01820 | 214 | PAF_acetylesterase_like PAF_acetylhydrolase (PAF-A | 94.35 | |
| cd01827 | 188 | sialate_O-acetylesterase_like1 sialate O-acetylest | 88.95 | |
| cd01833 | 157 | XynB_like SGNH_hydrolase subfamily, similar to Rum | 84.87 |
| >PLN02629 powdery mildew resistance 5 | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.5e-108 Score=818.98 Aligned_cols=333 Identities=37% Similarity=0.831 Sum_probs=292.3
Q ss_pred CCCCCCCcCcccceeeCCCCCCCCCCCCCC-CccCCcccccCCCCCCccccceeecCCCCCCCCChHHHHHHhcCCeEEE
Q 015036 63 DRFEESCNVFEGKWIWDNVTYPLYSEESCP-YLVKQTTCQRNGRPDSFYQNWRWQPDGCKLPRFDPLKLLDILRGKRLMF 141 (414)
Q Consensus 63 ~~~~~~Cd~~~G~WV~d~~~~P~Y~~~~C~-~i~~~~~C~~nGRpD~~y~~wrWqP~~C~lprfd~~~fl~~LrgK~i~F 141 (414)
....+.||+|+|+||+|+ ++|+|++++|| +|++++||++|||||.+|++|||||++|+|||||+.+||+.||||+|+|
T Consensus 47 ~~~~~~CD~f~G~WV~D~-s~PlY~~~~Cp~fi~~~~nC~knGRPD~~Yl~WRWqP~gC~LPRFda~~fLe~~RgKrl~F 125 (387)
T PLN02629 47 QANQSTCALFVGTWVRDD-SYPLYQSSDCPGVIDPEFNCQMYGRPDSDYLKYRWQPLNCELPRFNGLEFLLKMKGKTVMF 125 (387)
T ss_pred CCCccccCCCCCeEecCC-CCCCCCCCCCccccccccchhhcCCCCcchhhccccCCCCCCCCcCHHHHHHHhcCCeEEE
Confidence 345678999999999995 68999999999 9999999999999999999999999999999999999999999999999
Q ss_pred EechhhHHHHHHHHHhhccccCCCceeeeecCCceEEEEeecceEEEEEEccccccccCCCCCccccccceeeccccccc
Q 015036 142 IGDSVQRGQFESMVCMVQSVIPEGKKSFHRIPPMKIFKAEEYNASIEYYWAPFIVESISDHATNHTVLKRLVDLDSIAKH 221 (414)
Q Consensus 142 VGDSl~Rq~~eSL~clL~~~~~~~~~~~~~~~~~~~~~f~~~n~tV~~~wspfLv~~~~~~~~~~~~~~~~~~lD~i~~~ 221 (414)
|||||+|||||||+|||++++|...+.....++.++|+|++||+||+||||||||+.+.+. ..+.++||+++.+
T Consensus 126 VGDSL~RNQ~eSLvClL~~~~p~~~~~~~~~~~~~~~~F~~yN~TV~~ywspfLV~~~~~~------~~~~l~LD~id~~ 199 (387)
T PLN02629 126 VGDSLGRNQWESLICLISSSVPSTRTQMSRGDPLSTFKFLDYGVSISFYKAPYLVDIDAVQ------GKRVLKLEEISGN 199 (387)
T ss_pred eccccchhHHHHHHHHhhccCCCCceeeecCCceEEEEeccCCEEEEEEecceEEeeecCC------CceeEEecCcchh
Confidence 9999999999999999999887665555566778899999999999999999999986543 1346899999988
Q ss_pred cCCCCCccEEEEeeeecccccCccee-ec--CCCCCCccccHHHHHHHHHHHHHHHHHhhcCCCcceEEEEeCCCCCCCC
Q 015036 222 GKSWQGVDVLVFESYVWWMYKPTINA-TY--GSADDIKEYNVTTAYRLAFETWANWLESSINPLTQKVYFMSMSPTHLWS 298 (414)
Q Consensus 222 ~~~~~~~DVlV~ntG~W~~~~~~~~~-~~--~~~~~~~~~~~~~ayr~al~t~~~~v~~~~~~~~t~Vf~Rt~sP~Hf~~ 298 (414)
+..|.++||||||+||||.+...+.. .+ .....+++|++.+|||+||+||++||++++++.+|+|||||+||+||+|
T Consensus 200 a~~w~~~DvlVfntghWw~~~~~~~~~~~~~~g~~~~~~~~~~~A~r~al~T~~~wv~~~~~~~kt~vffrT~SP~Hfe~ 279 (387)
T PLN02629 200 ANAWRDADVLIFNTGHWWSHQGSLQGWDYIESGGTYYQDMDRLVALEKALRTWAYWVDTNVDRSRTRVFFQSISPTHYNP 279 (387)
T ss_pred hhhhccCCEEEEeCccccCCCCeeEEeeeeccCCccccCccHHHHHHHHHHHHHHHHHhcCCCCCcEEEEEecCcccccC
Confidence 99999999999999999998874421 11 1223478999999999999999999999998889999999999999999
Q ss_pred CCCCCCC---CCCCCCCCccCcCCcCCCCCcHHHHHHHHHHHHHhcCceEEeecccccccccCCCCCccccccccccccc
Q 015036 299 WEWKPGS---NENCFNESYPIQGSYWGTGSSLTIMKIVQDILQELKIDVTFLNITQLSEYRKDAHTSVYGERKGKLLTKK 375 (414)
Q Consensus 299 g~W~~~~---gg~C~~~t~P~~~~~~~~~~~~~~~~i~~~~~~~~~~~v~lLDit~ms~~R~DgHp~~y~~~~~~~~~~~ 375 (414)
|+|++|+ +|+|+++|+|+.++... +....+++++++++++++.+|++||||+||++|||||||+|+.+ ++++
T Consensus 280 g~Wn~gg~~~~~~C~~et~P~~~~~~~-~~~~~~~~~ve~v~~~~~~~v~lLDIT~ls~lR~DgHPs~Y~~~----~~~~ 354 (387)
T PLN02629 280 SEWSAGASTTTKNCYGETTPMSGMTYP-GAYPDQMRVVDEVIRGMHNPAYLLDITLLSELRKDGHPSIYSGD----LSPS 354 (387)
T ss_pred CCcCCCCCCCCCCCccCCccCcCcccc-CcchHHHHHHHHHHHhcCCceEEEechhhhhcCCCCCcccccCC----Cchh
Confidence 9999863 47899999999843322 33445567889999988999999999999999999999999743 3566
Q ss_pred ccCCCCCCCCcccccCCCchhHHHHHHHHHHH
Q 015036 376 QRSDPKNFADCIHWCLPGVPDTWNEILYAHLL 407 (414)
Q Consensus 376 ~~~~~~~~~DC~HWCLPG~~D~WNelL~~~L~ 407 (414)
+++++..++||+||||||||||||||||++|+
T Consensus 355 ~~~~p~~~~DC~HWCLPGvpDTWNelL~a~L~ 386 (387)
T PLN02629 355 QRANPDRSADCSHWCLPGLPDTWNQLFYTALF 386 (387)
T ss_pred hccCCCCCCCcccccCCCCCccHHHHHHHHHh
Confidence 77788889999999999999999999999987
|
|
| >PF13839 PC-Esterase: GDSL/SGNH-like Acyl-Esterase family found in Pmr5 and Cas1p | Back alignment and domain information |
|---|
| >PF14416 PMR5N: PMR5 N terminal Domain | Back alignment and domain information |
|---|
| >cd01842 SGNH_hydrolase_like_5 SGNH_hydrolase subfamily | Back alignment and domain information |
|---|
| >cd01841 NnaC_like NnaC (CMP-NeuNAc synthetase) _like subfamily of SGNH_hydrolases, a diverse family of lipases and esterases | Back alignment and domain information |
|---|
| >cd01838 Isoamyl_acetate_hydrolase_like Isoamyl-acetate hydrolyzing esterase-like proteins | Back alignment and domain information |
|---|
| >cd01829 SGNH_hydrolase_peri2 SGNH_peri2; putative periplasmic member of the SGNH-family of hydrolases, a diverse family of lipases and esterases | Back alignment and domain information |
|---|
| >cd01820 PAF_acetylesterase_like PAF_acetylhydrolase (PAF-AH)_like subfamily of SGNH-hydrolases | Back alignment and domain information |
|---|
| >cd01827 sialate_O-acetylesterase_like1 sialate O-acetylesterase_like family of the SGNH hydrolases, a diverse family of lipases and esterases | Back alignment and domain information |
|---|
| >cd01833 XynB_like SGNH_hydrolase subfamily, similar to Ruminococcus flavefaciens XynB | Back alignment and domain information |
|---|
Homologous Structure Templates
Structure Templates Detected by BLAST 
Original result of BLAST against Protein Data Bank
No homologous structure with e-value below 0.005
Structure Templates Detected by RPS-BLAST 
Original result of RPS-BLAST against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 414 | |||
| 1vt4_I | 1221 | APAF-1 related killer DARK; drosophila apoptosome, | 6e-04 |
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 41.4 bits (96), Expect = 6e-04
Identities = 74/481 (15%), Positives = 136/481 (28%), Gaps = 147/481 (30%)
Query: 31 LDNLKSYDSK--IFEFYGEPERYKQRRPVFVSPKDRFEESCNVFEG-------KWIWDNV 81
D KS SK I + +F + + EE F K++ +
Sbjct: 39 QDMPKSILSKEEIDHIIMSKDAVSGTLRLFWTLLSKQEEMVQKFVEEVLRINYKFLMSPI 98
Query: 82 TY----PLYSEESCPYLVKQTTCQRNGRPDSFYQNWRWQPDGCKLPRFDPLK--LLDILR 135
P S + Y+ ++ + + + Y R QP + L+ LL++
Sbjct: 99 KTEQRQP--SMMTRMYIEQRDRLYNDNQVFAKYNVSRLQP-------YLKLRQALLELRP 149
Query: 136 GKRL----MF-IGDSVQRGQFESMVCMVQSVIPEGKKSFHRIPPMKIF-----KAEEYNA 185
K + + G + + V KIF
Sbjct: 150 AKNVLIDGVLGSGKTW----------VALDVCLS--YKVQCKMDFKIFWLNLKNCNSPET 197
Query: 186 SIE-----YYWAPFIVESISDHATN--------HTVLKR----------LVDLDSIAKHG 222
+E Y S SDH++N L+R L+ L ++ ++
Sbjct: 198 VLEMLQKLLYQIDPNWTSRSDHSSNIKLRIHSIQAELRRLLKSKPYENCLLVLLNV-QNA 256
Query: 223 KSWQGVD----VLV--------------------FESYVWWMYKP---TINATY--GSAD 253
K+W + +L+ + + + ++ Y
Sbjct: 257 KAWNAFNLSCKILLTTRFKQVTDFLSAATTTHISLDHHSMTLTPDEVKSLLLKYLDCRPQ 316
Query: 254 DIKEYNVTTA----------YRLAFETWANWLESSINPLTQKVYFMSMSPTHLWSWEWKP 303
D+ +TT R TW NW + + LT + S L +P
Sbjct: 317 DLPREVLTTNPRRLSIIAESIRDGLATWDNWKHVNCDKLTT---IIESSLNVL-----EP 368
Query: 304 GSNENC------FNESYPIQ----GSYWGTGSSLTIMKIVQDILQELKIDVTFLNITQLS 353
F S I W V ++ +L + +
Sbjct: 369 AEYRKMFDRLSVFPPSAHIPTILLSLIWFDVIK----SDVMVVVNKLH------KYSLVE 418
Query: 354 EYRKDAHTSVYG---ERKGKLLTKKQ--RS--DPKNFADCIHWCLPG-VPDTWNEILYAH 405
+ K++ S+ E K KL + RS D N + +P ++ Y+H
Sbjct: 419 KQPKESTISIPSIYLELKVKLENEYALHRSIVDHYNIPKT--FDSDDLIPPYLDQYFYSH 476
Query: 406 L 406
+
Sbjct: 477 I 477
|
Structure Templates Detected by HHsearch 
Original result of HHsearch against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 414 | |||
| 4h08_A | 200 | Putative hydrolase; GDSL-like lipase/acylhydrolase | 97.36 | |
| 3dc7_A | 232 | Putative uncharacterized protein LP_3323; NESG LPR | 94.8 |
| >4h08_A Putative hydrolase; GDSL-like lipase/acylhydrolase family protein, structural GE joint center for structural genomics, JCSG; HET: GOL; 1.80A {Bacteroides thetaiotaomicron} | Back alignment and structure |
|---|
Probab=97.36 E-value=0.0011 Score=59.19 Aligned_cols=92 Identities=12% Similarity=0.136 Sum_probs=54.9
Q ss_pred CCccEEEEeeeecccccCcceeecCCCCCCccccHHHHHHHHHHHHHHHHHhhcCCCcceEEEEeCCCCCCCCCCCCCCC
Q 015036 226 QGVDVLVFESYVWWMYKPTINATYGSADDIKEYNVTTAYRLAFETWANWLESSINPLTQKVYFMSMSPTHLWSWEWKPGS 305 (414)
Q Consensus 226 ~~~DVlV~ntG~W~~~~~~~~~~~~~~~~~~~~~~~~ayr~al~t~~~~v~~~~~~~~t~Vf~Rt~sP~Hf~~g~W~~~~ 305 (414)
..+|+|||+.|..= .. .-.+.|+..|+++++.+.+. .+++++++-+..|..... +..
T Consensus 73 ~~pd~Vvi~~G~ND-----~~------------~~~~~~~~~l~~ii~~l~~~--~p~~~ii~~~~~P~~~~~--~~~-- 129 (200)
T 4h08_A 73 TKFDVIHFNNGLHG-----FD------------YTEEEYDKSFPKLIKIIRKY--APKAKLIWANTTPVRTGE--GMK-- 129 (200)
T ss_dssp SCCSEEEECCCSSC-----TT------------SCHHHHHHHHHHHHHHHHHH--CTTCEEEEECCCCCEESG--GGC--
T ss_pred CCCCeEEEEeeeCC-----CC------------CCHHHHHHHHHHHHHHHhhh--CCCccEEEeccCCCcccc--ccc--
Confidence 45899999999761 00 11567888888888877653 457889999988864211 100
Q ss_pred CCCCCCCCccCcCCcCCCCCcHHHHHHHHHHHHHhcCceEEeecccccc
Q 015036 306 NENCFNESYPIQGSYWGTGSSLTIMKIVQDILQELKIDVTFLNITQLSE 354 (414)
Q Consensus 306 gg~C~~~t~P~~~~~~~~~~~~~~~~i~~~~~~~~~~~v~lLDit~ms~ 354 (414)
.. .... ..-.+++++++++.++ .++.++|++..+.
T Consensus 130 ---~~---~~~~------~~~~~~n~~~~~~a~~--~~v~~iD~~~~~~ 164 (200)
T 4h08_A 130 ---EF---APIT------ERLNVRNQIALKHINR--ASIEVNDLWKVVI 164 (200)
T ss_dssp ---EE---CTHH------HHHHHHHHHHHHHHHH--TTCEEECHHHHHT
T ss_pred ---cc---chhH------HHHHHHHHHHHHHhhh--cceEEEecHHhHh
Confidence 00 0000 0012345556666554 5688999877654
|
| >3dc7_A Putative uncharacterized protein LP_3323; NESG LPR109 X-RAY LP_3323, structural genomics, PSI-2, prote structure initiative; 2.12A {Lactobacillus plantarum} SCOP: c.23.10.9 | Back alignment and structure |
|---|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against SCOP70(version1.75) database
No hit with e-value below 0.005
Homologous Domains Detected by HHsearch 
Original result of HHsearch against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 414 | |||
| d2o14a2 | 208 | Hypothetical protein YxiM {Bacillus subtilis [TaxI | 97.07 | |
| d3dc7a1 | 207 | Uncharacterized protein Lp3323 {Lactobacillus plan | 96.97 | |
| d3bzwa1 | 248 | Uncharacterized protein BT2961 {Bacteroides thetai | 80.22 |
| >d2o14a2 c.23.10.8 (A:160-367) Hypothetical protein YxiM {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Flavodoxin-like superfamily: SGNH hydrolase family: YxiM C-terminal domain-like domain: Hypothetical protein YxiM species: Bacillus subtilis [TaxId: 1423]
Probab=97.07 E-value=0.00046 Score=59.78 Aligned_cols=93 Identities=6% Similarity=-0.021 Sum_probs=48.7
Q ss_pred CCCccEEEEeeeecccccCcceeecCCCCCCccccHHHHHHHHHHHHHHHHHhhcCCCcceEEEEeCCCCCCCCCCCCCC
Q 015036 225 WQGVDVLVFESYVWWMYKPTINATYGSADDIKEYNVTTAYRLAFETWANWLESSINPLTQKVYFMSMSPTHLWSWEWKPG 304 (414)
Q Consensus 225 ~~~~DVlV~ntG~W~~~~~~~~~~~~~~~~~~~~~~~~ayr~al~t~~~~v~~~~~~~~t~Vf~Rt~sP~Hf~~g~W~~~ 304 (414)
...+|+|||..|.- .. ... . -...+.|+..++++++.+.+ .+..+++-+..|. .. ..+.
T Consensus 69 ~~~~D~vvi~~G~N---D~--~~~-~-------~~~~~~~~~~l~~li~~~~~----~~~~~vl~~~~~~-~~-~~~~-- 127 (208)
T d2o14a2 69 IKPGDYFMLQLGIN---DT--NPK-H-------KESEAEFKEVMRDMIRQVKA----KGADVILSTPQGR-AT-DFTS-- 127 (208)
T ss_dssp CCTTCEEEEECCTG---GG--CGG-G-------CCCHHHHHHHHHHHHHHHHT----TTCEEEEECCCCC-TT-CBCT--
T ss_pred cCCCCEEEEEcCCC---cc--ccc-c-------cccHHHHHHHHHHHHHHHHh----cCCceeecccccc-cc-cccc--
Confidence 34579999998865 10 000 0 12367888888888876543 2344555443332 11 0000
Q ss_pred CCCCCCCCCccCcCCcCCCCCcHHHHHHHHHHHHHhcCceEEeecccccc
Q 015036 305 SNENCFNESYPIQGSYWGTGSSLTIMKIVQDILQELKIDVTFLNITQLSE 354 (414)
Q Consensus 305 ~gg~C~~~t~P~~~~~~~~~~~~~~~~i~~~~~~~~~~~v~lLDit~ms~ 354 (414)
.....+. ..+.+.+++++.++ ..+.++|++.++.
T Consensus 128 -----~~~~~~~---------~~~~~~~~~~~a~~--~~v~~vD~~~~~~ 161 (208)
T d2o14a2 128 -----EGIHSSV---------NRWYRASILALAEE--EKTYLIDLNVLSS 161 (208)
T ss_dssp -----TSCBCCT---------TSTTHHHHHHHHHH--TTCEEECHHHHHH
T ss_pred -----ccchHHH---------HHHHHHHHHHhhcc--CCcEEeccHHHHH
Confidence 0011111 11244566666664 4688899987764
|
| >d3dc7a1 c.23.10.9 (A:18-224) Uncharacterized protein Lp3323 {Lactobacillus plantarum [TaxId: 1590]} | Back information, alignment and structure |
|---|
| >d3bzwa1 c.23.10.9 (A:38-285) Uncharacterized protein BT2961 {Bacteroides thetaiotaomicron [TaxId: 818]} | Back information, alignment and structure |
|---|