Citrus Sinensis ID: 015042
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
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Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
| ID | Alignment graph | Length |
Definition |
RBH(Q2H) |
RBH(H2Q) |
Q cover |
H cover |
Identity |
E-value |
| Query | 414 | 2.2.26 [Sep-21-2011] | |||||||
| Q56YU0 | 501 | Aldehyde dehydrogenase fa | yes | no | 0.995 | 0.822 | 0.736 | 0.0 | |
| P86886 | 500 | Retinal dehydrogenase 1 O | N/A | no | 0.985 | 0.816 | 0.549 | 1e-134 | |
| P24549 | 501 | Retinal dehydrogenase 1 O | yes | no | 0.980 | 0.810 | 0.549 | 1e-134 | |
| Q9SU63 | 538 | Aldehyde dehydrogenase fa | no | no | 1.0 | 0.769 | 0.541 | 1e-133 | |
| P27463 | 509 | Retinal dehydrogenase 1 O | yes | no | 0.980 | 0.797 | 0.551 | 1e-132 | |
| P51647 | 501 | Retinal dehydrogenase 1 O | yes | no | 0.980 | 0.810 | 0.539 | 1e-132 | |
| Q8MI17 | 496 | Retinal dehydrogenase 1 O | yes | no | 0.985 | 0.822 | 0.549 | 1e-131 | |
| P13601 | 501 | Aldehyde dehydrogenase, c | no | no | 0.980 | 0.810 | 0.539 | 1e-130 | |
| P00352 | 501 | Retinal dehydrogenase 1 O | yes | no | 0.985 | 0.814 | 0.529 | 1e-130 | |
| P51977 | 501 | Retinal dehydrogenase 1 O | N/A | no | 0.980 | 0.810 | 0.539 | 1e-130 |
| >sp|Q56YU0|AL2C4_ARATH Aldehyde dehydrogenase family 2 member C4 OS=Arabidopsis thaliana GN=ALDH2C4 PE=1 SV=2 | Back alignment and function desciption |
|---|
Score = 643 bits (1658), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 304/413 (73%), Positives = 358/413 (86%), Gaps = 1/413 (0%)
Query: 3 KFADLIEEHVEELAALDALDAGKVYLRAKTAEIPGAAEFLRFFAGAADKIHGEVLKMSSE 62
KFADLIEE++EELA LDA+D GK++ K A+IP A R+ AGAADKIHGE LKM+ +
Sbjct: 89 KFADLIEENIEELAKLDAVDGGKLFQLGKYADIPATAGHFRYNAGAADKIHGETLKMTRQ 148
Query: 63 -LQGYTLREPVGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLTALYYAHLA 121
L GYTL+EP+GVVG+IIPWNFP+ MF KV+PA+AAGCTM+VKPAEQT L+AL+YAHL+
Sbjct: 149 SLFGYTLKEPIGVVGNIIPWNFPSIMFATKVAPAMAAGCTMVVKPAEQTSLSALFYAHLS 208
Query: 122 KLAGIPDGVLNVVPGFGPTAGAAICSHMDIDYVCFTGSTDVGRLVMQAAAASNLKQVSLE 181
K AGIPDGVLN+V GFG TAGAAI SHMD+D V FTGSTDVGR +MQAAAASNLK+VSLE
Sbjct: 209 KEAGIPDGVLNIVTGFGSTAGAAIASHMDVDKVSFTGSTDVGRKIMQAAAASNLKKVSLE 268
Query: 182 LGGKSPLLIFDDADLDTAADVALLGNLYNKGEICVASSRVFVQEGIYDKFEKKLLEKAKA 241
LGGKSPLLIF+DAD+D AAD+ALLG YNKGEICVASSRVFVQEGIYDK +KL+EKAK
Sbjct: 269 LGGKSPLLIFNDADIDKAADLALLGCFYNKGEICVASSRVFVQEGIYDKVVEKLVEKAKD 328
Query: 242 WLVGDPFDPTVRQGPQISERHFDRILSYIEHGKREGATLLTGGKPIGDKGYYIEPTIFTN 301
W VGDPFD T RQGPQ+ +R F++ILSYIEHGK EGATLLTGGK IGDKGY+I+PTIF +
Sbjct: 329 WTVGDPFDSTARQGPQVDKRQFEKILSYIEHGKNEGATLLTGGKAIGDKGYFIQPTIFAD 388
Query: 302 VKEDMIIAKEEIFGPVMALMKFKTVEEAIKSANNTQYGLAAGIVTKDLNVANTVSRSIRA 361
V EDM I ++EIFGPVM+LMKFKTVEE IK ANNT+YGLAAGI+++D+++ NTVSRSI+A
Sbjct: 389 VTEDMKIYQDEIFGPVMSLMKFKTVEEGIKCANNTKYGLAAGILSQDIDLINTVSRSIKA 448
Query: 362 GIIWINCYFGFSMDCPYGGYKMSGFGREYGLESLYKYLQIKSVVTPIYNSPWL 414
GIIW+NCYFGF +DCPYGGYKMSG RE G+++L YLQ KSVV P++NSPW+
Sbjct: 449 GIIWVNCYFGFDLDCPYGGYKMSGNCRESGMDALDNYLQTKSVVMPLHNSPWM 501
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Involved in ferulic acid and sinapic acid biosynthesis by oxidation of conyferylaldehyde and sinapaldehyde, respectively. Can oxidize L-lactaldehyde. Possesses activity on acetaldehyde and glycolaldehyde in vitro. Arabidopsis thaliana (taxid: 3702) EC: 1EC: .EC: 2EC: .EC: 1EC: .EC: 3 |
| >sp|P86886|AL1A1_MESAU Retinal dehydrogenase 1 OS=Mesocricetus auratus GN=ALDH1A1 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 478 bits (1229), Expect = e-134, Method: Compositional matrix adjust.
Identities = 224/408 (54%), Positives = 302/408 (74%)
Query: 1 MWKFADLIEEHVEELAALDALDAGKVYLRAKTAEIPGAAEFLRFFAGAADKIHGEVLKMS 60
++K ADL+E LA L+A + GKV+ + ++ G + L++ AG ADK+HG+ +
Sbjct: 88 LYKLADLMERDRLLLATLEATNGGKVFASSYLFDLGGCIKALKYCAGWADKVHGQTIPSD 147
Query: 61 SELQGYTLREPVGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLTALYYAHL 120
++ YT REP+GV G IIPWNFP MF K+ PAL G T+IVKPAEQTPLTALY A L
Sbjct: 148 GDIFTYTRREPIGVCGQIIPWNFPLLMFIWKIGPALGCGNTVIVKPAEQTPLTALYMASL 207
Query: 121 AKLAGIPDGVLNVVPGFGPTAGAAICSHMDIDYVCFTGSTDVGRLVMQAAAASNLKQVSL 180
K AG P GV+N+VPG+GPTAGAAI SHMDID V FTGST VG+L+ +AA SNLK+V+L
Sbjct: 208 IKEAGFPPGVVNIVPGYGPTAGAAISSHMDIDKVAFTGSTQVGKLIKEAAGKSNLKRVTL 267
Query: 181 ELGGKSPLLIFDDADLDTAADVALLGNLYNKGEICVASSRVFVQEGIYDKFEKKLLEKAK 240
ELGGKSP ++F DADLDTA + A G Y++G+ CVA+SR+FV+E IYD+F ++ +E+AK
Sbjct: 268 ELGGKSPCIVFADADLDTAVEFAHYGVFYHQGQCCVAASRLFVEESIYDEFVRRSVERAK 327
Query: 241 AWLVGDPFDPTVRQGPQISERHFDRILSYIEHGKREGATLLTGGKPIGDKGYYIEPTIFT 300
+++G+P + + QGPQI + D+IL IE GK+EGA L GG G+KGY+++PT+F+
Sbjct: 328 KYVLGNPLNSGINQGPQIDKEQHDKILDLIESGKKEGAKLECGGGRWGNKGYFVQPTVFS 387
Query: 301 NVKEDMIIAKEEIFGPVMALMKFKTVEEAIKSANNTQYGLAAGIVTKDLNVANTVSRSIR 360
NV +DM IAKEEIFGPV +MKFK++++ IK ANNT YGLAAG+ TKDL+ A TVS +++
Sbjct: 388 NVTDDMRIAKEEIFGPVQQIMKFKSLDDVIKRANNTSYGLAAGVFTKDLDKAITVSSALQ 447
Query: 361 AGIIWINCYFGFSMDCPYGGYKMSGFGREYGLESLYKYLQIKSVVTPI 408
AG++W+NCY S CP+GG+KMSG GRE G +Y+Y ++K+V I
Sbjct: 448 AGVVWVNCYMMLSAQCPFGGFKMSGNGRELGEHGIYEYTELKTVAIKI 495
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Binds free retinal and cellular retinol-binding protein-bound retinal. Can convert/oxidize retinaldehyde to retinoic acid. Mesocricetus auratus (taxid: 10036) EC: 1 EC: . EC: 2 EC: . EC: 1 EC: . EC: 3 EC: 6 |
| >sp|P24549|AL1A1_MOUSE Retinal dehydrogenase 1 OS=Mus musculus GN=Aldh1a1 PE=1 SV=5 | Back alignment and function description |
|---|
Score = 478 bits (1229), Expect = e-134, Method: Compositional matrix adjust.
Identities = 223/406 (54%), Positives = 302/406 (74%)
Query: 3 KFADLIEEHVEELAALDALDAGKVYLRAKTAEIPGAAEFLRFFAGAADKIHGEVLKMSSE 62
K ADL+E LA ++AL+ GKV+ A +++ G + L++ AG ADKIHG+ + +
Sbjct: 91 KLADLMERDRLLLATMEALNGGKVFANAYLSDLGGCIKALKYCAGWADKIHGQTIPSDGD 150
Query: 63 LQGYTLREPVGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLTALYYAHLAK 122
+ YT REP+GV G IIPWNFP MF K+ PAL+ G T++VKPAEQTPLTAL+ A L K
Sbjct: 151 IFTYTRREPIGVCGQIIPWNFPMLMFIWKIGPALSCGNTVVVKPAEQTPLTALHLASLIK 210
Query: 123 LAGIPDGVLNVVPGFGPTAGAAICSHMDIDYVCFTGSTDVGRLVMQAAAASNLKQVSLEL 182
AG P GV+N+VPG+GPTAGAAI SHMD+D V FTGST VG+L+ +AA SNLK+V+LEL
Sbjct: 211 EAGFPPGVVNIVPGYGPTAGAAISSHMDVDKVAFTGSTQVGKLIKEAAGKSNLKRVTLEL 270
Query: 183 GGKSPLLIFDDADLDTAADVALLGNLYNKGEICVASSRVFVQEGIYDKFEKKLLEKAKAW 242
GGKSP ++F DADLD A + A G Y++G+ CVA+SR+FV+E +YD+F K+ +E+AK +
Sbjct: 271 GGKSPCIVFADADLDIAVEFAHHGVFYHQGQCCVAASRIFVEESVYDEFVKRSVERAKKY 330
Query: 243 LVGDPFDPTVRQGPQISERHFDRILSYIEHGKREGATLLTGGKPIGDKGYYIEPTIFTNV 302
++G+P P + QGPQI + D+IL IE GK+EGA L GG G+KG++++PT+F+NV
Sbjct: 331 VLGNPLTPGINQGPQIDKEQHDKILDLIESGKKEGAKLECGGGRWGNKGFFVQPTVFSNV 390
Query: 303 KEDMIIAKEEIFGPVMALMKFKTVEEAIKSANNTQYGLAAGIVTKDLNVANTVSRSIRAG 362
++M IAKEEIFGPV +MKFK+V++ IK ANNT YGLAAG+ TKDL+ A TVS +++AG
Sbjct: 391 TDEMRIAKEEIFGPVQQIMKFKSVDDVIKRANNTTYGLAAGLFTKDLDKAITVSSALQAG 450
Query: 363 IIWINCYFGFSMDCPYGGYKMSGFGREYGLESLYKYLQIKSVVTPI 408
++W+NCY S CP+GG+KMSG GRE G LY+Y ++K+V I
Sbjct: 451 VVWVNCYMMLSAQCPFGGFKMSGNGRELGEHGLYEYTELKTVAMKI 496
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In addition to the activity on acetaldehyde and related substrates, is also involved in the oxidation of aldehydes derived from biogenic amines such as epinephrine and norepinephrine, as well as the aldehydes generated via lipid peroxidation. Binds free retinal and cellular retinol-binding protein-bound retinal. Can convert/oxidize retinaldehyde to retinoic acid. Mus musculus (taxid: 10090) EC: 1 EC: . EC: 2 EC: . EC: 1 EC: . EC: 3 EC: 6 |
| >sp|Q9SU63|AL2B4_ARATH Aldehyde dehydrogenase family 2 member B4, mitochondrial OS=Arabidopsis thaliana GN=ALDH2B4 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 475 bits (1222), Expect = e-133, Method: Compositional matrix adjust.
Identities = 224/414 (54%), Positives = 298/414 (71%)
Query: 1 MWKFADLIEEHVEELAALDALDAGKVYLRAKTAEIPGAAEFLRFFAGAADKIHGEVLKMS 60
+ +FADL+E+H EELA+L+ D GK Y ++ TAEIP A R++AG ADKIHG +
Sbjct: 125 LLRFADLVEKHSEELASLETWDNGKPYQQSLTAEIPMFARLFRYYAGWADKIHGLTIPAD 184
Query: 61 SELQGYTLREPVGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLTALYYAHL 120
Q +TL EP+GV G IIPWNFP MF KV PALA G T+++K AEQTPLTA Y L
Sbjct: 185 GNYQVHTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLTAFYAGKL 244
Query: 121 AKLAGIPDGVLNVVPGFGPTAGAAICSHMDIDYVCFTGSTDVGRLVMQAAAASNLKQVSL 180
AG+P GVLN+V GFG TAGAA+ SHMD+D + FTGSTD G++++ AA SNLK V+L
Sbjct: 245 FLEAGLPPGVLNIVSGFGATAGAALASHMDVDKLAFTGSTDTGKVILGLAANSNLKPVTL 304
Query: 181 ELGGKSPLLIFDDADLDTAADVALLGNLYNKGEICVASSRVFVQEGIYDKFEKKLLEKAK 240
ELGGKSP ++F+DAD+D A ++A +N+G+ C A SR FV E +YD+F +K +A
Sbjct: 305 ELGGKSPFIVFEDADIDKAVELAHFALFFNQGQCCCAGSRTFVHEKVYDEFVEKSKARAL 364
Query: 241 AWLVGDPFDPTVRQGPQISERHFDRILSYIEHGKREGATLLTGGKPIGDKGYYIEPTIFT 300
+VGDPF + QGPQI + F++++ YI+ G ATL GG IGDKGY+I+PT+F+
Sbjct: 365 KRVVGDPFRKGIEQGPQIDLKQFEKVMKYIKSGIESNATLECGGDQIGDKGYFIQPTVFS 424
Query: 301 NVKEDMIIAKEEIFGPVMALMKFKTVEEAIKSANNTQYGLAAGIVTKDLNVANTVSRSIR 360
NVK+DM+IA++EIFGPV +++KF V+E IK AN T+YGLAAG+ TK+L+ AN VSR+++
Sbjct: 425 NVKDDMLIAQDEIFGPVQSILKFSDVDEVIKRANETKYGLAAGVFTKNLDTANRVSRALK 484
Query: 361 AGIIWINCYFGFSMDCPYGGYKMSGFGREYGLESLYKYLQIKSVVTPIYNSPWL 414
AG +W+NC+ F P+GGYKMSG GRE G+ SL YLQIK+VVT + W+
Sbjct: 485 AGTVWVNCFDVFDAAIPFGGYKMSGNGREKGIYSLNNYLQIKAVVTALNKPAWI 538
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Possesses activity on acetaldehyde and glycolaldehyde in vitro. Arabidopsis thaliana (taxid: 3702) EC: 1 EC: . EC: 2 EC: . EC: 1 EC: . EC: 3 |
| >sp|P27463|AL1A1_CHICK Retinal dehydrogenase 1 OS=Gallus gallus GN=ALDH1A1 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 473 bits (1216), Expect = e-132, Method: Compositional matrix adjust.
Identities = 224/406 (55%), Positives = 295/406 (72%)
Query: 3 KFADLIEEHVEELAALDALDAGKVYLRAKTAEIPGAAEFLRFFAGAADKIHGEVLKMSSE 62
K ADL+E LA ++A+D GK++ A ++ + +R+ AG ADKIHG + M
Sbjct: 99 KLADLVERDRLTLATMEAIDGGKLFSTAYLMDLGACIKTIRYCAGWADKIHGRTVPMDGN 158
Query: 63 LQGYTLREPVGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLTALYYAHLAK 122
+T EPVGV G IIPWNFP MF K++PAL G T++VKPAEQTPL+ALY L K
Sbjct: 159 FFTFTRHEPVGVCGQIIPWNFPLVMFIWKIAPALCCGNTVVVKPAEQTPLSALYMGSLIK 218
Query: 123 LAGIPDGVLNVVPGFGPTAGAAICSHMDIDYVCFTGSTDVGRLVMQAAAASNLKQVSLEL 182
AG P GV+N+VPGFGPTAGAAI HMDID V FTGST+VG+L+ +AA +NLK+V+LEL
Sbjct: 219 EAGFPPGVVNIVPGFGPTAGAAISHHMDIDKVSFTGSTEVGKLIKEAAGKTNLKRVTLEL 278
Query: 183 GGKSPLLIFDDADLDTAADVALLGNLYNKGEICVASSRVFVQEGIYDKFEKKLLEKAKAW 242
GGKSP +IF DADLD AA+ A +G Y++G+ C+A SR+FV+E IYD+F ++ +E+AK +
Sbjct: 279 GGKSPNIIFADADLDEAAEFAHIGLFYHQGQCCIAGSRIFVEEPIYDEFVRRSIERAKKY 338
Query: 243 LVGDPFDPTVRQGPQISERHFDRILSYIEHGKREGATLLTGGKPIGDKGYYIEPTIFTNV 302
+GDP P V+QGPQI + F +IL IE GK+EGA L GG P G+KGY+I+PT+F+NV
Sbjct: 339 TLGDPLLPGVQQGPQIDKEQFQKILDLIESGKKEGAKLECGGGPWGNKGYFIQPTVFSNV 398
Query: 303 KEDMIIAKEEIFGPVMALMKFKTVEEAIKSANNTQYGLAAGIVTKDLNVANTVSRSIRAG 362
+DM IAKEEIFGPV +MKFKT++E IK ANNT YGLAA + TKD++ A T + +++AG
Sbjct: 399 TDDMRIAKEEIFGPVQQIMKFKTIDEVIKRANNTTYGLAAAVFTKDIDKALTFASALQAG 458
Query: 363 IIWINCYFGFSMDCPYGGYKMSGFGREYGLESLYKYLQIKSVVTPI 408
+W+NCY FS CP+GG+KMSG GRE G L +Y ++K+V I
Sbjct: 459 TVWVNCYSAFSAQCPFGGFKMSGNGRELGEYGLQEYTEVKTVTIKI 504
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Binds free retinal and cellular retinol-binding protein-bound retinal. Can convert/oxidize retinaldehyde to retinoic acid. Gallus gallus (taxid: 9031) EC: 1 EC: . EC: 2 EC: . EC: 1 EC: . EC: 3 EC: 6 |
| >sp|P51647|AL1A1_RAT Retinal dehydrogenase 1 OS=Rattus norvegicus GN=Aldh1a1 PE=1 SV=3 | Back alignment and function description |
|---|
Score = 471 bits (1213), Expect = e-132, Method: Compositional matrix adjust.
Identities = 219/406 (53%), Positives = 302/406 (74%)
Query: 3 KFADLIEEHVEELAALDALDAGKVYLRAKTAEIPGAAEFLRFFAGAADKIHGEVLKMSSE 62
K ADL+E LA ++A++ GKV+ A +++ G+ + L++ AG ADKIHG+ + +
Sbjct: 91 KLADLMERDRLLLATIEAINGGKVFANAYLSDLGGSIKALKYCAGWADKIHGQTIPSDGD 150
Query: 63 LQGYTLREPVGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLTALYYAHLAK 122
+ +T REP+GV G IIPWNFP MF K+ PAL+ G T++VKPAEQTPLTAL+ A L K
Sbjct: 151 IFTFTRREPIGVCGQIIPWNFPLLMFIWKIGPALSCGNTVVVKPAEQTPLTALHMASLIK 210
Query: 123 LAGIPDGVLNVVPGFGPTAGAAICSHMDIDYVCFTGSTDVGRLVMQAAAASNLKQVSLEL 182
AG P GV+N+VPG+GPTAGAAI SHMD+D V FTGST VG+L+ +AA SNLK+V+LEL
Sbjct: 211 EAGFPPGVVNIVPGYGPTAGAAISSHMDVDKVAFTGSTQVGKLIKEAAGKSNLKRVTLEL 270
Query: 183 GGKSPLLIFDDADLDTAADVALLGNLYNKGEICVASSRVFVQEGIYDKFEKKLLEKAKAW 242
GGKSP ++F DADLD A + A G Y++G+ CVA+SR+FV+E +YD+F +K +E+AK +
Sbjct: 271 GGKSPCIVFADADLDIAVEFAHHGVFYHQGQCCVAASRIFVEESVYDEFVRKSVERAKKY 330
Query: 243 LVGDPFDPTVRQGPQISERHFDRILSYIEHGKREGATLLTGGKPIGDKGYYIEPTIFTNV 302
++G+P + QGPQI + D+IL IE GK+EGA L GG G+KG++++PT+F+NV
Sbjct: 331 VLGNPLTQGINQGPQIDKEQHDKILDLIESGKKEGAKLECGGGRWGNKGFFVQPTVFSNV 390
Query: 303 KEDMIIAKEEIFGPVMALMKFKTVEEAIKSANNTQYGLAAGIVTKDLNVANTVSRSIRAG 362
++M IAKEEIFGPV +MKFK++++ IK ANNT YGLAAG+ TKDL+ A TVS +++AG
Sbjct: 391 TDEMRIAKEEIFGPVQQIMKFKSIDDVIKRANNTTYGLAAGVFTKDLDRAITVSSALQAG 450
Query: 363 IIWINCYFGFSMDCPYGGYKMSGFGREYGLESLYKYLQIKSVVTPI 408
++W+NCY S CP+GG+KMSG GRE G LY+Y ++K+V I
Sbjct: 451 VVWVNCYMILSAQCPFGGFKMSGNGRELGEHGLYEYTELKTVAMKI 496
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Is capable of converting 9-cis and all-trans retinal to corresponding retinoic acid with high efficiency, 9-cis retinal being 2-fold more active than all-trans retinal. Rattus norvegicus (taxid: 10116) EC: 1 EC: . EC: 2 EC: . EC: 1 EC: . EC: 3 EC: 6 |
| >sp|Q8MI17|AL1A1_RABIT Retinal dehydrogenase 1 OS=Oryctolagus cuniculus GN=ALDH1A1 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 470 bits (1209), Expect = e-131, Method: Compositional matrix adjust.
Identities = 224/408 (54%), Positives = 300/408 (73%)
Query: 1 MWKFADLIEEHVEELAALDALDAGKVYLRAKTAEIPGAAEFLRFFAGAADKIHGEVLKMS 60
++K ADLIE LA +++L+AGK++ A ++ G + LR+ AG ADKI G + M
Sbjct: 84 LYKLADLIERDRLLLATMESLNAGKLFPNAYLMDLGGCIKTLRYCAGWADKIQGRTMPMD 143
Query: 61 SELQGYTLREPVGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLTALYYAHL 120
+ YT EPVGV G IIPWNFP M K+ PAL+ G T+IVKPAEQTPLTAL+ A L
Sbjct: 144 GDFFCYTRHEPVGVCGQIIPWNFPLVMLIWKIGPALSCGNTVIVKPAEQTPLTALHVASL 203
Query: 121 AKLAGIPDGVLNVVPGFGPTAGAAICSHMDIDYVCFTGSTDVGRLVMQAAAASNLKQVSL 180
K AG P GV+N+VPG+GPTAGAAI SHMDID V FTGST+VG+L+ +AA SNLK+V+L
Sbjct: 204 IKEAGFPPGVVNIVPGYGPTAGAAISSHMDIDKVAFTGSTEVGKLIKEAAGKSNLKRVTL 263
Query: 181 ELGGKSPLLIFDDADLDTAADVALLGNLYNKGEICVASSRVFVQEGIYDKFEKKLLEKAK 240
ELGGKSP ++F DADLD A + A G Y++G+ C+A+SR+FV+E IYD+F ++ +E+AK
Sbjct: 264 ELGGKSPCIVFADADLDNAVEFAHQGVFYHQGQCCIAASRLFVEESIYDEFVRRSVERAK 323
Query: 241 AWLVGDPFDPTVRQGPQISERHFDRILSYIEHGKREGATLLTGGKPIGDKGYYIEPTIFT 300
+++G+P P V QGPQI + +++IL IE GK+EGA L GG P G+KGY+I+PT+F+
Sbjct: 324 KYVLGNPLAPEVNQGPQIDKEQYNKILDLIESGKKEGAKLECGGGPWGNKGYFIQPTVFS 383
Query: 301 NVKEDMIIAKEEIFGPVMALMKFKTVEEAIKSANNTQYGLAAGIVTKDLNVANTVSRSIR 360
NV ++M IAKEEIFGPV +MKFK++++ IK ANNT YGL+AGI TKDL+ A TVS +++
Sbjct: 384 NVTDEMRIAKEEIFGPVQQIMKFKSLDDVIKRANNTTYGLSAGIFTKDLDKAVTVSSALQ 443
Query: 361 AGIIWINCYFGFSMDCPYGGYKMSGFGREYGLESLYKYLQIKSVVTPI 408
AG +W+NCY S P+GG+KMSG GRE G L +Y ++K+V I
Sbjct: 444 AGTVWVNCYSVVSAQVPFGGFKMSGNGRELGEYGLQQYTEVKTVTVKI 491
|
Can convert/oxidize retinaldehyde to retinoic acid. Oryctolagus cuniculus (taxid: 9986) EC: 1 EC: . EC: 2 EC: . EC: 1 EC: . EC: 3 EC: 6 |
| >sp|P13601|AL1A7_RAT Aldehyde dehydrogenase, cytosolic 1 OS=Rattus norvegicus GN=Aldh1a7 PE=1 SV=2 | Back alignment and function description |
|---|
Score = 466 bits (1200), Expect = e-130, Method: Compositional matrix adjust.
Identities = 219/406 (53%), Positives = 302/406 (74%)
Query: 3 KFADLIEEHVEELAALDALDAGKVYLRAKTAEIPGAAEFLRFFAGAADKIHGEVLKMSSE 62
K ADL+E LA +++++AGK++ A + + + L++FAG ADKIHG+ + +
Sbjct: 91 KLADLMERDRVLLATMESMNAGKIFTHAYLLDTEVSIKALKYFAGWADKIHGQTIPSDGD 150
Query: 63 LQGYTLREPVGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLTALYYAHLAK 122
+ YT REP+GV G IIPWN P +F K+ AL+ G T+IVKPAEQTPLTALY A L K
Sbjct: 151 VFTYTRREPIGVCGQIIPWNGPLILFIWKIGAALSCGNTVIVKPAEQTPLTALYMASLIK 210
Query: 123 LAGIPDGVLNVVPGFGPTAGAAICSHMDIDYVCFTGSTDVGRLVMQAAAASNLKQVSLEL 182
AG P GV+NVVPG+G TAGAAI SHMDID V FTGST+VG+L+ +AA SNLK+V+LEL
Sbjct: 211 EAGFPPGVVNVVPGYGSTAGAAISSHMDIDKVSFTGSTEVGKLIKEAAGKSNLKRVTLEL 270
Query: 183 GGKSPLLIFDDADLDTAADVALLGNLYNKGEICVASSRVFVQEGIYDKFEKKLLEKAKAW 242
GGKSP ++F DADLD+A + A G +++G+ICVA+SR+FV+E IYD+F ++ +E+AK +
Sbjct: 271 GGKSPCIVFADADLDSAVEFAHQGVFFHQGQICVAASRLFVEESIYDEFVRRSVERAKKY 330
Query: 243 LVGDPFDPTVRQGPQISERHFDRILSYIEHGKREGATLLTGGKPIGDKGYYIEPTIFTNV 302
++G+P D + QGPQI + +IL IE GK+EGA L GG G+KG++++PT+F+NV
Sbjct: 331 VLGNPLDSGISQGPQIDKEQHAKILDLIESGKKEGAKLECGGGRWGNKGFFVQPTVFSNV 390
Query: 303 KEDMIIAKEEIFGPVMALMKFKTVEEAIKSANNTQYGLAAGIVTKDLNVANTVSRSIRAG 362
++M IAKEEIFGPV +MKFK+++E IK ANNT YGLAAG+ TKDL+ A TVS +++AG
Sbjct: 391 TDEMRIAKEEIFGPVQQIMKFKSIDEVIKRANNTPYGLAAGVFTKDLDRAITVSSALQAG 450
Query: 363 IIWINCYFGFSMDCPYGGYKMSGFGREYGLESLYKYLQIKSVVTPI 408
+W+NCY S+ CP+GG+KMSG GRE G + +Y+Y ++K+V I
Sbjct: 451 TVWVNCYLTLSVQCPFGGFKMSGNGREMGEQGVYEYTELKTVAMKI 496
|
Can oxidize benzaldehyde, propionaldehyde and acetaldehyde. No detectable activity with retinal. Rattus norvegicus (taxid: 10116) EC: 1 EC: . EC: 2 EC: . EC: 1 EC: . EC: 3 |
| >sp|P00352|AL1A1_HUMAN Retinal dehydrogenase 1 OS=Homo sapiens GN=ALDH1A1 PE=1 SV=2 | Back alignment and function description |
|---|
Score = 465 bits (1197), Expect = e-130, Method: Compositional matrix adjust.
Identities = 216/408 (52%), Positives = 298/408 (73%)
Query: 1 MWKFADLIEEHVEELAALDALDAGKVYLRAKTAEIPGAAEFLRFFAGAADKIHGEVLKMS 60
++K ADLIE LA +++++ GK+Y A ++ G + LR+ AG ADKI G + +
Sbjct: 89 LYKLADLIERDRLLLATMESMNGGKLYSNAYLNDLAGCIKTLRYCAGWADKIQGRTIPID 148
Query: 61 SELQGYTLREPVGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLTALYYAHL 120
YT EP+GV G IIPWNFP M K+ PAL+ G T++VKPAEQTPLTAL+ A L
Sbjct: 149 GNFFTYTRHEPIGVCGQIIPWNFPLVMLIWKIGPALSCGNTVVVKPAEQTPLTALHVASL 208
Query: 121 AKLAGIPDGVLNVVPGFGPTAGAAICSHMDIDYVCFTGSTDVGRLVMQAAAASNLKQVSL 180
K AG P GV+N+VPG+GPTAGAAI SHMDID V FTGST+VG+L+ +AA SNLK+V+L
Sbjct: 209 IKEAGFPPGVVNIVPGYGPTAGAAISSHMDIDKVAFTGSTEVGKLIKEAAGKSNLKRVTL 268
Query: 181 ELGGKSPLLIFDDADLDTAADVALLGNLYNKGEICVASSRVFVQEGIYDKFEKKLLEKAK 240
ELGGKSP ++ DADLD A + A G Y++G+ C+A+SR+FV+E IYD+F ++ +E+AK
Sbjct: 269 ELGGKSPCIVLADADLDNAVEFAHHGVFYHQGQCCIAASRIFVEESIYDEFVRRSVERAK 328
Query: 241 AWLVGDPFDPTVRQGPQISERHFDRILSYIEHGKREGATLLTGGKPIGDKGYYIEPTIFT 300
+++G+P P V QGPQI + +D+IL IE GK+EGA L GG P G+KGY+++PT+F+
Sbjct: 329 KYILGNPLTPGVTQGPQIDKEQYDKILDLIESGKKEGAKLECGGGPWGNKGYFVQPTVFS 388
Query: 301 NVKEDMIIAKEEIFGPVMALMKFKTVEEAIKSANNTQYGLAAGIVTKDLNVANTVSRSIR 360
NV ++M IAKEEIFGPV +MKFK++++ IK ANNT YGL+AG+ TKD++ A T+S +++
Sbjct: 389 NVTDEMRIAKEEIFGPVQQIMKFKSLDDVIKRANNTFYGLSAGVFTKDIDKAITISSALQ 448
Query: 361 AGIIWINCYFGFSMDCPYGGYKMSGFGREYGLESLYKYLQIKSVVTPI 408
AG +W+NCY S CP+GG+KMSG GRE G ++Y ++K+V I
Sbjct: 449 AGTVWVNCYGVVSAQCPFGGFKMSGNGRELGEYGFHEYTEVKTVTVKI 496
|
Binds free retinal and cellular retinol-binding protein-bound retinal. Can convert/oxidize retinaldehyde to retinoic acid. Homo sapiens (taxid: 9606) EC: 1 EC: . EC: 2 EC: . EC: 1 EC: . EC: 3 EC: 6 |
| >sp|P51977|AL1A1_SHEEP Retinal dehydrogenase 1 OS=Ovis aries GN=ALDH1A1 PE=1 SV=2 | Back alignment and function description |
|---|
Score = 465 bits (1196), Expect = e-130, Method: Compositional matrix adjust.
Identities = 219/406 (53%), Positives = 296/406 (72%)
Query: 3 KFADLIEEHVEELAALDALDAGKVYLRAKTAEIPGAAEFLRFFAGAADKIHGEVLKMSSE 62
K ADLIE LA ++A++ GK++ A ++ G + LR+ AG ADKI G + M
Sbjct: 91 KLADLIERDRLLLATMEAMNGGKLFSNAYLMDLGGCIKTLRYCAGWADKIQGRTIPMDGN 150
Query: 63 LQGYTLREPVGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLTALYYAHLAK 122
YT EPVGV G IIPWNFP MF K+ PAL+ G T++VKPAEQTPLTAL+ L K
Sbjct: 151 FFTYTRSEPVGVCGQIIPWNFPLLMFLWKIGPALSCGNTVVVKPAEQTPLTALHMGSLIK 210
Query: 123 LAGIPDGVLNVVPGFGPTAGAAICSHMDIDYVCFTGSTDVGRLVMQAAAASNLKQVSLEL 182
AG P GV+N+VPG+GPTAGAAI SHMD+D V FTGST+VG+L+ +AA SNLK+VSLEL
Sbjct: 211 EAGFPPGVVNIVPGYGPTAGAAISSHMDVDKVAFTGSTEVGKLIKEAAGKSNLKRVSLEL 270
Query: 183 GGKSPLLIFDDADLDTAADVALLGNLYNKGEICVASSRVFVQEGIYDKFEKKLLEKAKAW 242
GGKSP ++F DADLD A + A G Y++G+ C+A+SR+FV+E IYD+F ++ +E+AK +
Sbjct: 271 GGKSPCIVFADADLDNAVEFAHQGVFYHQGQCCIAASRLFVEESIYDEFVRRSVERAKKY 330
Query: 243 LVGDPFDPTVRQGPQISERHFDRILSYIEHGKREGATLLTGGKPIGDKGYYIEPTIFTNV 302
++G+P P V QGPQI + +++IL IE GK+EGA L GG P G+KGY+I+PT+F++V
Sbjct: 331 VLGNPLTPGVSQGPQIDKEQYEKILDLIESGKKEGAKLECGGGPWGNKGYFIQPTVFSDV 390
Query: 303 KEDMIIAKEEIFGPVMALMKFKTVEEAIKSANNTQYGLAAGIVTKDLNVANTVSRSIRAG 362
+DM IAKEEIFGPV +MKFK++++ IK ANNT YGL+AGI T D++ A TVS ++++G
Sbjct: 391 TDDMRIAKEEIFGPVQQIMKFKSLDDVIKRANNTFYGLSAGIFTNDIDKAITVSSALQSG 450
Query: 363 IIWINCYFGFSMDCPYGGYKMSGFGREYGLESLYKYLQIKSVVTPI 408
+W+NCY S CP+GG+KMSG GRE G ++Y ++K+V I
Sbjct: 451 TVWVNCYSVVSAQCPFGGFKMSGNGRELGEYGFHEYTEVKTVTIKI 496
|
Binds free retinal and cellular retinol-binding protein-bound retinal. Can convert/oxidize retinaldehyde to retinoic acid. Ovis aries (taxid: 9940) EC: 1 EC: . EC: 2 EC: . EC: 1 EC: . EC: 3 EC: 6 |
Close Homologs in the Non-Redundant Database Detected by BLAST
Original result of BLAST against Nonredundant Database
| GI | Alignment Graph | Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 414 | ||||||
| 255546535 | 501 | aldehyde dehydrogenase, putative [Ricinu | 1.0 | 0.826 | 0.787 | 0.0 | |
| 255546541 | 501 | aldehyde dehydrogenase, putative [Ricinu | 1.0 | 0.826 | 0.777 | 0.0 | |
| 388495142 | 497 | unknown [Lotus japonicus] | 1.0 | 0.832 | 0.775 | 0.0 | |
| 356513129 | 502 | PREDICTED: aldehyde dehydrogenase family | 1.0 | 0.824 | 0.758 | 0.0 | |
| 356520525 | 501 | PREDICTED: aldehyde dehydrogenase family | 1.0 | 0.826 | 0.763 | 0.0 | |
| 357518719 | 503 | Aldehyde dehydrogenase [Medicago truncat | 1.0 | 0.823 | 0.765 | 0.0 | |
| 356531249 | 501 | PREDICTED: aldehyde dehydrogenase family | 1.0 | 0.826 | 0.758 | 0.0 | |
| 357500461 | 502 | Aldehyde dehydrogenase [Medicago truncat | 1.0 | 0.824 | 0.782 | 0.0 | |
| 356531251 | 499 | PREDICTED: aldehyde dehydrogenase family | 1.0 | 0.829 | 0.756 | 0.0 | |
| 357518717 | 481 | Aldehyde dehydrogenase [Medicago truncat | 0.968 | 0.833 | 0.756 | 0.0 |
| >gi|255546535|ref|XP_002514327.1| aldehyde dehydrogenase, putative [Ricinus communis] gi|223546783|gb|EEF48281.1| aldehyde dehydrogenase, putative [Ricinus communis] | Back alignment and taxonomy information |
|---|
Score = 698 bits (1801), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 326/414 (78%), Positives = 375/414 (90%)
Query: 1 MWKFADLIEEHVEELAALDALDAGKVYLRAKTAEIPGAAEFLRFFAGAADKIHGEVLKMS 60
+ +FAD+IEEH+EELAA+D +DAGK++ K A+IP A LR++AGAADKIHG+VLKMS
Sbjct: 88 LMEFADIIEEHIEELAAIDTIDAGKLFTMGKAADIPMAINLLRYYAGAADKIHGQVLKMS 147
Query: 61 SELQGYTLREPVGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLTALYYAHL 120
ELQGYTL EPVGVVGHIIPWNFPT MFFMKV+PALAAGCTM+VKPAEQTPL+ALYYAHL
Sbjct: 148 RELQGYTLHEPVGVVGHIIPWNFPTNMFFMKVAPALAAGCTMVVKPAEQTPLSALYYAHL 207
Query: 121 AKLAGIPDGVLNVVPGFGPTAGAAICSHMDIDYVCFTGSTDVGRLVMQAAAASNLKQVSL 180
AK AGIPDGV+NV+ GFGPTAGAAI SHMDID V FTGST+VGR +MQAAA SNLKQVSL
Sbjct: 208 AKQAGIPDGVINVITGFGPTAGAAIASHMDIDKVSFTGSTEVGRKIMQAAATSNLKQVSL 267
Query: 181 ELGGKSPLLIFDDADLDTAADVALLGNLYNKGEICVASSRVFVQEGIYDKFEKKLLEKAK 240
ELGGKSPLLIFDDAD+DTA D+ALLG LYNKGE+CVASSRV+VQEGIYD+ KKL +KAK
Sbjct: 268 ELGGKSPLLIFDDADIDTAVDLALLGILYNKGEVCVASSRVYVQEGIYDELVKKLEKKAK 327
Query: 241 AWLVGDPFDPTVRQGPQISERHFDRILSYIEHGKREGATLLTGGKPIGDKGYYIEPTIFT 300
W+VGDPFDP R GPQ+ ++ FD+IL YIEHGK+EGATLLTGGKP G+KGYY+ PTIFT
Sbjct: 328 DWVVGDPFDPISRLGPQVDKQQFDKILYYIEHGKKEGATLLTGGKPSGNKGYYLHPTIFT 387
Query: 301 NVKEDMIIAKEEIFGPVMALMKFKTVEEAIKSANNTQYGLAAGIVTKDLNVANTVSRSIR 360
+VKEDM+IAK+EIFGPVM+LMKFKT++EAI+ ANNT+YGLAAGIVTK+L+VANTVSRSIR
Sbjct: 388 DVKEDMMIAKDEIFGPVMSLMKFKTIDEAIERANNTKYGLAAGIVTKNLDVANTVSRSIR 447
Query: 361 AGIIWINCYFGFSMDCPYGGYKMSGFGREYGLESLYKYLQIKSVVTPIYNSPWL 414
AGIIWINCYF F DCP+GGYKMSGFGR+ GL++L+KYLQ+KSVVTPIYNSPWL
Sbjct: 448 AGIIWINCYFVFDNDCPFGGYKMSGFGRDLGLDALHKYLQVKSVVTPIYNSPWL 501
|
Source: Ricinus communis Species: Ricinus communis Genus: Ricinus Family: Euphorbiaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|255546541|ref|XP_002514330.1| aldehyde dehydrogenase, putative [Ricinus communis] gi|223546786|gb|EEF48284.1| aldehyde dehydrogenase, putative [Ricinus communis] | Back alignment and taxonomy information |
|---|
Score = 692 bits (1785), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 322/414 (77%), Positives = 374/414 (90%)
Query: 1 MWKFADLIEEHVEELAALDALDAGKVYLRAKTAEIPGAAEFLRFFAGAADKIHGEVLKMS 60
M +FADLI+E+ EELAALD +D GK++ KT +IP AA LR++AGAADKIHGEVLKMS
Sbjct: 88 MMRFADLIDENKEELAALDTIDGGKLFSGGKTVDIPSAANTLRYYAGAADKIHGEVLKMS 147
Query: 61 SELQGYTLREPVGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLTALYYAHL 120
LQGYTLREP+GVVGHIIPWNFP+ MFFMKV+PALAAGCT IVKPAEQTPL+AL+YAHL
Sbjct: 148 RALQGYTLREPIGVVGHIIPWNFPSLMFFMKVAPALAAGCTTIVKPAEQTPLSALFYAHL 207
Query: 121 AKLAGIPDGVLNVVPGFGPTAGAAICSHMDIDYVCFTGSTDVGRLVMQAAAASNLKQVSL 180
AKLAG+PDGVLNVV G+GPTAGAAI SHMDID V FTGST+VGR VMQAAA SNLKQVSL
Sbjct: 208 AKLAGLPDGVLNVVTGYGPTAGAAIASHMDIDMVSFTGSTEVGRKVMQAAATSNLKQVSL 267
Query: 181 ELGGKSPLLIFDDADLDTAADVALLGNLYNKGEICVASSRVFVQEGIYDKFEKKLLEKAK 240
ELGGKSPLLIFDDAD++TA+D+AL G LYNKGE+CVASSRV+VQEGIYD+ KKL+EKAK
Sbjct: 268 ELGGKSPLLIFDDADINTASDLALFGILYNKGEVCVASSRVYVQEGIYDEIVKKLVEKAK 327
Query: 241 AWLVGDPFDPTVRQGPQISERHFDRILSYIEHGKREGATLLTGGKPIGDKGYYIEPTIFT 300
AW+VGDPFDP V QGPQ+ ++ +++ILSYIEH K EGATLLTGGK + +KGYYIEPTIF
Sbjct: 328 AWVVGDPFDPKVHQGPQVDKQQYEKILSYIEHAKGEGATLLTGGKSLFEKGYYIEPTIFA 387
Query: 301 NVKEDMIIAKEEIFGPVMALMKFKTVEEAIKSANNTQYGLAAGIVTKDLNVANTVSRSIR 360
+++EDM+I K+EIFGPVM+LMKFKT+EEAIK AN+T+YGLAAGIVTKDLN+ANTV+RSIR
Sbjct: 388 DLQEDMLIVKDEIFGPVMSLMKFKTIEEAIKRANDTRYGLAAGIVTKDLNIANTVARSIR 447
Query: 361 AGIIWINCYFGFSMDCPYGGYKMSGFGREYGLESLYKYLQIKSVVTPIYNSPWL 414
AG+IW+NCYF F DCPYGGYK SGFGR++GLE+L+KYLQ+KSVVTPIYNSPWL
Sbjct: 448 AGVIWVNCYFAFDQDCPYGGYKTSGFGRDFGLEALHKYLQVKSVVTPIYNSPWL 501
|
Source: Ricinus communis Species: Ricinus communis Genus: Ricinus Family: Euphorbiaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|388495142|gb|AFK35637.1| unknown [Lotus japonicus] | Back alignment and taxonomy information |
|---|
Score = 683 bits (1762), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 321/414 (77%), Positives = 372/414 (89%)
Query: 1 MWKFADLIEEHVEELAALDALDAGKVYLRAKTAEIPGAAEFLRFFAGAADKIHGEVLKMS 60
M K ADLI+E+ EELAALDA+DAGK+Y K +IPGAA+ LR+FAGAADKIHGEVLK+S
Sbjct: 84 MMKLADLIDENTEELAALDAIDAGKLYHMCKAMDIPGAAKTLRYFAGAADKIHGEVLKVS 143
Query: 61 SELQGYTLREPVGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLTALYYAHL 120
EL YTL EPVGVVGHIIPWNFP + FF KVSPALAAGCTM++KPAEQTPL+AL+ AHL
Sbjct: 144 RELHAYTLMEPVGVVGHIIPWNFPASFFFTKVSPALAAGCTMVLKPAEQTPLSALFCAHL 203
Query: 121 AKLAGIPDGVLNVVPGFGPTAGAAICSHMDIDYVCFTGSTDVGRLVMQAAAASNLKQVSL 180
AKLAGIPDGVLNVVPGFG TAGAA+ SHMDID V FTGST GR VM+AAA+SNLK+VSL
Sbjct: 204 AKLAGIPDGVLNVVPGFGSTAGAAVSSHMDIDAVSFTGSTQTGREVMKAAASSNLKRVSL 263
Query: 181 ELGGKSPLLIFDDADLDTAADVALLGNLYNKGEICVASSRVFVQEGIYDKFEKKLLEKAK 240
ELGGKSPL+IF+DAD+D AA++AL G L NKGE+CVASSRVFVQEGIYD+FEKKL+EKAK
Sbjct: 264 ELGGKSPLIIFNDADIDKAAELALYGILLNKGEVCVASSRVFVQEGIYDEFEKKLVEKAK 323
Query: 241 AWLVGDPFDPTVRQGPQISERHFDRILSYIEHGKREGATLLTGGKPIGDKGYYIEPTIFT 300
AW+VGDPFDP V+QGPQ+ ++ F++ILSYIEHGKREGATLLTGGK +G+KGYYIEPTIF+
Sbjct: 324 AWVVGDPFDPKVQQGPQVDKKQFEKILSYIEHGKREGATLLTGGKSVGNKGYYIEPTIFS 383
Query: 301 NVKEDMIIAKEEIFGPVMALMKFKTVEEAIKSANNTQYGLAAGIVTKDLNVANTVSRSIR 360
NVKEDM+I ++EIFGPVMAL KFKTVEEAIKSANNT+YGLAAGI+TK+L++ANTVSRSIR
Sbjct: 384 NVKEDMLIVQDEIFGPVMALKKFKTVEEAIKSANNTRYGLAAGIMTKNLDIANTVSRSIR 443
Query: 361 AGIIWINCYFGFSMDCPYGGYKMSGFGREYGLESLYKYLQIKSVVTPIYNSPWL 414
AG +WINCYF D P+GGYK SGFG++YGLE+++KYLQ+ SVVTPIYNSPWL
Sbjct: 444 AGSVWINCYFAIDNDIPFGGYKASGFGKDYGLEAIHKYLQVNSVVTPIYNSPWL 497
|
Source: Lotus japonicus Species: Lotus japonicus Genus: Lotus Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|356513129|ref|XP_003525266.1| PREDICTED: aldehyde dehydrogenase family 2 member C4-like [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 682 bits (1760), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 314/414 (75%), Positives = 374/414 (90%)
Query: 1 MWKFADLIEEHVEELAALDALDAGKVYLRAKTAEIPGAAEFLRFFAGAADKIHGEVLKMS 60
+ K+A+LIEE+ EELAALDA+DAGK+Y + E+P AA LR++AGAADKIHGEVLKMS
Sbjct: 89 LLKWAELIEENAEELAALDAIDAGKLYHMCRNLEVPAAANTLRYYAGAADKIHGEVLKMS 148
Query: 61 SELQGYTLREPVGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLTALYYAHL 120
+ YTL EP+GVVGHI PWNFP TMF++KV+P+LAAGCTM++KPAEQTPL+AL+ AHL
Sbjct: 149 RDFHAYTLLEPLGVVGHITPWNFPNTMFYIKVAPSLAAGCTMVLKPAEQTPLSALFNAHL 208
Query: 121 AKLAGIPDGVLNVVPGFGPTAGAAICSHMDIDYVCFTGSTDVGRLVMQAAAASNLKQVSL 180
AKLAGIPDGV+NVVPGFGPTAGAA+ SHMD+D V FTGST GR +MQAAA SNLKQVSL
Sbjct: 209 AKLAGIPDGVINVVPGFGPTAGAALSSHMDVDKVSFTGSTQTGREIMQAAAKSNLKQVSL 268
Query: 181 ELGGKSPLLIFDDADLDTAADVALLGNLYNKGEICVASSRVFVQEGIYDKFEKKLLEKAK 240
ELGGKSPL+IFDDAD+D AA++ALLG LYNKGE+CVASSRV VQEGIYD+FEKKL+EKAK
Sbjct: 269 ELGGKSPLIIFDDADIDKAAELALLGILYNKGEVCVASSRVLVQEGIYDEFEKKLVEKAK 328
Query: 241 AWLVGDPFDPTVRQGPQISERHFDRILSYIEHGKREGATLLTGGKPIGDKGYYIEPTIFT 300
AW+VGDPFDP V+QGPQ+ + F+++LSYIEHGK+EGATLLTGGK +G+KGY+IEPTIF+
Sbjct: 329 AWVVGDPFDPKVQQGPQVDKEQFEKVLSYIEHGKKEGATLLTGGKTVGNKGYFIEPTIFS 388
Query: 301 NVKEDMIIAKEEIFGPVMALMKFKTVEEAIKSANNTQYGLAAGIVTKDLNVANTVSRSIR 360
N++EDM+IA++EIFGPVMAL KFKT+EEAIKSANNT+YGLAAGIVTK+L+ ANTVSRSIR
Sbjct: 389 NIREDMLIAQDEIFGPVMALKKFKTIEEAIKSANNTKYGLAAGIVTKNLDTANTVSRSIR 448
Query: 361 AGIIWINCYFGFSMDCPYGGYKMSGFGREYGLESLYKYLQIKSVVTPIYNSPWL 414
AG IWINCYF F D P+GGYKMSGFG+++GLE+L+KYLQ+KSVVTP+YNSPWL
Sbjct: 449 AGTIWINCYFAFGDDVPFGGYKMSGFGKDHGLEALHKYLQVKSVVTPLYNSPWL 502
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|356520525|ref|XP_003528912.1| PREDICTED: aldehyde dehydrogenase family 2 member C4-like [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 677 bits (1747), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 316/414 (76%), Positives = 372/414 (89%)
Query: 1 MWKFADLIEEHVEELAALDALDAGKVYLRAKTAEIPGAAEFLRFFAGAADKIHGEVLKMS 60
M K+ADLI++++EE+AALDA+DAGK+Y K +IP AA +R++AGAADKIHGEVLK S
Sbjct: 88 MMKWADLIDQNIEEIAALDAIDAGKLYHWCKAVDIPAAANTIRYYAGAADKIHGEVLKAS 147
Query: 61 SELQGYTLREPVGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLTALYYAHL 120
E YTL EP+GVVGHIIPWNFP+TMF KVSP+LAAGCTM++KPAEQTPL+AL+YAHL
Sbjct: 148 REFHAYTLLEPIGVVGHIIPWNFPSTMFVAKVSPSLAAGCTMVLKPAEQTPLSALFYAHL 207
Query: 121 AKLAGIPDGVLNVVPGFGPTAGAAICSHMDIDYVCFTGSTDVGRLVMQAAAASNLKQVSL 180
AKLAGIPDGVLNVVPGFG TAGAAI SHMDID V FTGST+VGR VM+AAA SNLK VSL
Sbjct: 208 AKLAGIPDGVLNVVPGFGQTAGAAISSHMDIDKVSFTGSTEVGREVMRAAANSNLKPVSL 267
Query: 181 ELGGKSPLLIFDDADLDTAADVALLGNLYNKGEICVASSRVFVQEGIYDKFEKKLLEKAK 240
ELGGKSP+++FDDAD+D AA +AL+G L+NKGEICVA SRV VQEGIYD+FEKKL+EKA
Sbjct: 268 ELGGKSPVIVFDDADVDKAAGLALMGILFNKGEICVAGSRVLVQEGIYDEFEKKLVEKAN 327
Query: 241 AWLVGDPFDPTVRQGPQISERHFDRILSYIEHGKREGATLLTGGKPIGDKGYYIEPTIFT 300
AW+VGDPFDP V+QGPQ+ ++ F++ILSYIEHGK+EGATLLTGGK +G+KGYYIEPTIF+
Sbjct: 328 AWVVGDPFDPKVQQGPQVDKKQFEKILSYIEHGKKEGATLLTGGKRVGNKGYYIEPTIFS 387
Query: 301 NVKEDMIIAKEEIFGPVMALMKFKTVEEAIKSANNTQYGLAAGIVTKDLNVANTVSRSIR 360
NVKEDM+I ++EIFGPVMALMKFKT+E+AIK ANNT+YGLA+GIVTK L+ ANTVSRSIR
Sbjct: 388 NVKEDMLIVQDEIFGPVMALMKFKTIEDAIKIANNTRYGLASGIVTKSLDTANTVSRSIR 447
Query: 361 AGIIWINCYFGFSMDCPYGGYKMSGFGREYGLESLYKYLQIKSVVTPIYNSPWL 414
AGI+WINCYF F D PYGGYKMSGFGR++G+E+L+KYLQ+KSVVTPIYNSPWL
Sbjct: 448 AGIVWINCYFAFGDDIPYGGYKMSGFGRDFGMEALHKYLQVKSVVTPIYNSPWL 501
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|357518719|ref|XP_003629648.1| Aldehyde dehydrogenase [Medicago truncatula] gi|357521043|ref|XP_003630810.1| Aldehyde dehydrogenase [Medicago truncatula] gi|355523670|gb|AET04124.1| Aldehyde dehydrogenase [Medicago truncatula] gi|355524832|gb|AET05286.1| Aldehyde dehydrogenase [Medicago truncatula] | Back alignment and taxonomy information |
|---|
Score = 677 bits (1746), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 317/414 (76%), Positives = 365/414 (88%)
Query: 1 MWKFADLIEEHVEELAALDALDAGKVYLRAKTAEIPGAAEFLRFFAGAADKIHGEVLKMS 60
M KFA+LI+E++EELA LDA+DAGKVY K EIP AA LR++AGAADKIHGEVLK S
Sbjct: 90 MMKFAELIDENIEELATLDAIDAGKVYFINKAFEIPSAANTLRYYAGAADKIHGEVLKSS 149
Query: 61 SELQGYTLREPVGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLTALYYAHL 120
+ YTL EP+GVVGHIIPWN PT +FF KVSP+LAAGCTM++KPAEQTPL+AL+YAHL
Sbjct: 150 GQFHAYTLMEPIGVVGHIIPWNAPTMVFFTKVSPSLAAGCTMVLKPAEQTPLSALFYAHL 209
Query: 121 AKLAGIPDGVLNVVPGFGPTAGAAICSHMDIDYVCFTGSTDVGRLVMQAAAASNLKQVSL 180
AKLAGIP+GVLNVVPGFGPTAGAAI SHMDID V FTGS +VGR +MQAAA SNLK VSL
Sbjct: 210 AKLAGIPNGVLNVVPGFGPTAGAAISSHMDIDVVSFTGSVEVGREIMQAAAKSNLKHVSL 269
Query: 181 ELGGKSPLLIFDDADLDTAADVALLGNLYNKGEICVASSRVFVQEGIYDKFEKKLLEKAK 240
ELGGKSPL+IFDDAD+D A ++ALLG L NKGEICVA SRVFVQEGIYD+ EKKL+EKAK
Sbjct: 270 ELGGKSPLIIFDDADIDKAVELALLGILANKGEICVACSRVFVQEGIYDQVEKKLVEKAK 329
Query: 241 AWLVGDPFDPTVRQGPQISERHFDRILSYIEHGKREGATLLTGGKPIGDKGYYIEPTIFT 300
AW++GDPFDP +QGPQ F++I+SYIEHGKREGATLLTGG+ +G +GYYIEPTIF+
Sbjct: 330 AWVIGDPFDPKTQQGPQADRNQFEKIISYIEHGKREGATLLTGGRRVGSQGYYIEPTIFS 389
Query: 301 NVKEDMIIAKEEIFGPVMALMKFKTVEEAIKSANNTQYGLAAGIVTKDLNVANTVSRSIR 360
NVKEDM+IA++EIFGPVMALMKFKT+EEAIKSANNT+YGLAAGIVTK+L++ANTVSRSIR
Sbjct: 390 NVKEDMLIAQDEIFGPVMALMKFKTIEEAIKSANNTRYGLAAGIVTKNLDIANTVSRSIR 449
Query: 361 AGIIWINCYFGFSMDCPYGGYKMSGFGREYGLESLYKYLQIKSVVTPIYNSPWL 414
AGIIWIN Y D P+GGYKMSGFGR+ GLE+L+KYLQ+KS+VTPIYNSPWL
Sbjct: 450 AGIIWINSYLAVGSDIPFGGYKMSGFGRDQGLEALHKYLQVKSIVTPIYNSPWL 503
|
Source: Medicago truncatula Species: Medicago truncatula Genus: Medicago Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|356531249|ref|XP_003534190.1| PREDICTED: aldehyde dehydrogenase family 2 member C4-like [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 674 bits (1738), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 314/414 (75%), Positives = 371/414 (89%)
Query: 1 MWKFADLIEEHVEELAALDALDAGKVYLRAKTAEIPGAAEFLRFFAGAADKIHGEVLKMS 60
M K+ADL+++++EE+AALDA+DAGK+Y K +IP AA +R++AGAADKIHGEVLK S
Sbjct: 88 MMKWADLVDQNIEEIAALDAIDAGKLYHWCKAVDIPAAASTIRYYAGAADKIHGEVLKAS 147
Query: 61 SELQGYTLREPVGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLTALYYAHL 120
E YTL EP+GVVGHIIPWNFP+TMF KVSP+LAAGCTM++KPAEQTPL+AL+YAHL
Sbjct: 148 REFHAYTLLEPIGVVGHIIPWNFPSTMFVAKVSPSLAAGCTMVLKPAEQTPLSALFYAHL 207
Query: 121 AKLAGIPDGVLNVVPGFGPTAGAAICSHMDIDYVCFTGSTDVGRLVMQAAAASNLKQVSL 180
AKLAGIPDGVLNVVPGFG TAG AI HMDID V FTGST+VGR VM+AAA SNLK VSL
Sbjct: 208 AKLAGIPDGVLNVVPGFGQTAGVAISLHMDIDKVSFTGSTEVGREVMRAAANSNLKPVSL 267
Query: 181 ELGGKSPLLIFDDADLDTAADVALLGNLYNKGEICVASSRVFVQEGIYDKFEKKLLEKAK 240
ELGGKSP+++FDDAD+D AA++ALLG L+NKGEICVA SRV VQEGIYD+FEKKL+EKAK
Sbjct: 268 ELGGKSPVIVFDDADVDKAAELALLGILFNKGEICVAGSRVLVQEGIYDEFEKKLVEKAK 327
Query: 241 AWLVGDPFDPTVRQGPQISERHFDRILSYIEHGKREGATLLTGGKPIGDKGYYIEPTIFT 300
AW+VGDPFDP V+QGPQ+ ++ F++ILSYIE GK+EGATLLTGGK +G+KGYYIEPTIF+
Sbjct: 328 AWVVGDPFDPKVQQGPQVDKKQFEKILSYIEQGKKEGATLLTGGKRVGNKGYYIEPTIFS 387
Query: 301 NVKEDMIIAKEEIFGPVMALMKFKTVEEAIKSANNTQYGLAAGIVTKDLNVANTVSRSIR 360
NVKEDM+I ++EIFGPVMALMKFKT+E+AIK ANNT+YGLA+GIVTK L+ ANTVSRSIR
Sbjct: 388 NVKEDMLIVQDEIFGPVMALMKFKTIEDAIKIANNTRYGLASGIVTKSLDTANTVSRSIR 447
Query: 361 AGIIWINCYFGFSMDCPYGGYKMSGFGREYGLESLYKYLQIKSVVTPIYNSPWL 414
AGI+WINCYF F D PYGGYKMSGFGR++G+E+L+KYLQ+KSVVTPIYNSPWL
Sbjct: 448 AGIVWINCYFAFGNDIPYGGYKMSGFGRDFGMEALHKYLQVKSVVTPIYNSPWL 501
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|357500461|ref|XP_003620519.1| Aldehyde dehydrogenase [Medicago truncatula] gi|355495534|gb|AES76737.1| Aldehyde dehydrogenase [Medicago truncatula] | Back alignment and taxonomy information |
|---|
Score = 671 bits (1731), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 324/414 (78%), Positives = 375/414 (90%)
Query: 1 MWKFADLIEEHVEELAALDALDAGKVYLRAKTAEIPGAAEFLRFFAGAADKIHGEVLKMS 60
M K+ADLI++++EE+AALD +DAGK+Y K +IPG A +R++AGAADKIHG+VLK +
Sbjct: 89 MLKWADLIDQNIEEIAALDTIDAGKLYTFCKAVDIPGVANIIRYYAGAADKIHGKVLKPA 148
Query: 61 SELQGYTLREPVGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLTALYYAHL 120
EL YTL EP+GVVGHIIPWNFP+TMF KV+PALAAGCTM++KPAEQTPL+AL+YAHL
Sbjct: 149 RELHAYTLMEPIGVVGHIIPWNFPSTMFAAKVAPALAAGCTMVLKPAEQTPLSALFYAHL 208
Query: 121 AKLAGIPDGVLNVVPGFGPTAGAAICSHMDIDYVCFTGSTDVGRLVMQAAAASNLKQVSL 180
AK AGIPDGVLNVVPGFG TAGAAI SHMDID V FTGST+VGR +M +AA SNLK VSL
Sbjct: 209 AKEAGIPDGVLNVVPGFGATAGAAISSHMDIDKVSFTGSTEVGREIMVSAARSNLKPVSL 268
Query: 181 ELGGKSPLLIFDDADLDTAADVALLGNLYNKGEICVASSRVFVQEGIYDKFEKKLLEKAK 240
ELGGKSPLLIFDDAD++ AA++ALLG L+NKGEICVA SRVFVQEGIYD+FEKKL+EKAK
Sbjct: 269 ELGGKSPLLIFDDADVNKAAELALLGILFNKGEICVAGSRVFVQEGIYDEFEKKLVEKAK 328
Query: 241 AWLVGDPFDPTVRQGPQISERHFDRILSYIEHGKREGATLLTGGKPIGDKGYYIEPTIFT 300
AW+VGDPFDP V+QGPQ+ ++ F++ILSYIEHGK +GATLLTGGK IGDKGYYIEPTIF+
Sbjct: 329 AWVVGDPFDPKVQQGPQVDKKQFEKILSYIEHGKNDGATLLTGGKKIGDKGYYIEPTIFS 388
Query: 301 NVKEDMIIAKEEIFGPVMALMKFKTVEEAIKSANNTQYGLAAGIVTKDLNVANTVSRSIR 360
NVKEDM IA++EIFGPVMALMKFKT+EEAIKSANNT+YGLAAGIVTK+L++ANTVSRSIR
Sbjct: 389 NVKEDMRIAQDEIFGPVMALMKFKTIEEAIKSANNTKYGLAAGIVTKNLDIANTVSRSIR 448
Query: 361 AGIIWINCYFGFSMDCPYGGYKMSGFGREYGLESLYKYLQIKSVVTPIYNSPWL 414
AGIIWINCYF F D PYGGYKMSGFGR++GLESL+KYLQ+KSVVTPIYNSPWL
Sbjct: 449 AGIIWINCYFAFGNDIPYGGYKMSGFGRDFGLESLHKYLQVKSVVTPIYNSPWL 502
|
Source: Medicago truncatula Species: Medicago truncatula Genus: Medicago Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|356531251|ref|XP_003534191.1| PREDICTED: aldehyde dehydrogenase family 2 member C4-like [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 670 bits (1729), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 313/414 (75%), Positives = 366/414 (88%)
Query: 1 MWKFADLIEEHVEELAALDALDAGKVYLRAKTAEIPGAAEFLRFFAGAADKIHGEVLKMS 60
M K+ADLI++HVEE+AALDA+DAGK+Y K EIP A +R++AGAADKIHGEVLK +
Sbjct: 86 MMKWADLIDQHVEEIAALDAIDAGKLYHMLKAIEIPATANTIRYYAGAADKIHGEVLKPA 145
Query: 61 SELQGYTLREPVGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLTALYYAHL 120
E YTL EPVGVVGHIIPWNFP+ MF KVSP LAAGCTM++KPAEQTPL+AL+YAHL
Sbjct: 146 REFHAYTLLEPVGVVGHIIPWNFPSIMFVSKVSPCLAAGCTMVLKPAEQTPLSALFYAHL 205
Query: 121 AKLAGIPDGVLNVVPGFGPTAGAAICSHMDIDYVCFTGSTDVGRLVMQAAAASNLKQVSL 180
AKLAGIPDGVLNVVPGFG TAGAAICS MDID V FTGST+VGR VM+AAA SNLK VSL
Sbjct: 206 AKLAGIPDGVLNVVPGFGATAGAAICSDMDIDKVSFTGSTEVGREVMRAAANSNLKPVSL 265
Query: 181 ELGGKSPLLIFDDADLDTAADVALLGNLYNKGEICVASSRVFVQEGIYDKFEKKLLEKAK 240
ELGGKSP +IFDDADLD A ++AL+ +YNKGE+C A SRVFVQEGIYD+FEK+L+EKAK
Sbjct: 266 ELGGKSPFIIFDDADLDKAVELALMAVVYNKGEVCAAGSRVFVQEGIYDEFEKRLVEKAK 325
Query: 241 AWLVGDPFDPTVRQGPQISERHFDRILSYIEHGKREGATLLTGGKPIGDKGYYIEPTIFT 300
AW+VGDPFDP V+QGPQ+ ++ F++ILSYIEHGKREGATLLTGGK +G+KGYYIEPTIF+
Sbjct: 326 AWVVGDPFDPNVQQGPQVDKKQFEKILSYIEHGKREGATLLTGGKRVGNKGYYIEPTIFS 385
Query: 301 NVKEDMIIAKEEIFGPVMALMKFKTVEEAIKSANNTQYGLAAGIVTKDLNVANTVSRSIR 360
NVKEDM+IA++EIFGPV+ALMKFKT+EEAIKSANN++YGL AG+VTK L+ ANT+SRSIR
Sbjct: 386 NVKEDMLIAQDEIFGPVIALMKFKTIEEAIKSANNSRYGLVAGVVTKSLDTANTMSRSIR 445
Query: 361 AGIIWINCYFGFSMDCPYGGYKMSGFGREYGLESLYKYLQIKSVVTPIYNSPWL 414
AG++WINCYF F D PYGG KMSGFG++ GLE+L+KYL +KSVVTPIYNSPWL
Sbjct: 446 AGVVWINCYFAFENDIPYGGCKMSGFGKDSGLEALHKYLHVKSVVTPIYNSPWL 499
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|357518717|ref|XP_003629647.1| Aldehyde dehydrogenase [Medicago truncatula] gi|357521041|ref|XP_003630809.1| Aldehyde dehydrogenase [Medicago truncatula] gi|355523669|gb|AET04123.1| Aldehyde dehydrogenase [Medicago truncatula] gi|355524831|gb|AET05285.1| Aldehyde dehydrogenase [Medicago truncatula] | Back alignment and taxonomy information |
|---|
Score = 669 bits (1727), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 313/414 (75%), Positives = 366/414 (88%), Gaps = 13/414 (3%)
Query: 1 MWKFADLIEEHVEELAALDALDAGKVYLRAKTAEIPGAAEFLRFFAGAADKIHGEVLKMS 60
M KFADLI+E++EELAALDA+DAGK+Y K +IP AA LR++AGAADKIHGEVLK++
Sbjct: 81 MMKFADLIDENIEELAALDAIDAGKLYHMCKALDIPSAANTLRYYAGAADKIHGEVLKVA 140
Query: 61 SELQGYTLREPVGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLTALYYAHL 120
E YTL EP+GVVGHIIPWNFPT++FF+KVSP LAAGCTM+VKPAEQTPL+AL+YAHL
Sbjct: 141 REFHAYTLMEPIGVVGHIIPWNFPTSLFFVKVSPCLAAGCTMVVKPAEQTPLSALFYAHL 200
Query: 121 AKLAGIPDGVLNVVPGFGPTAGAAICSHMDIDYVCFTGSTDVGRLVMQAAAASNLKQVSL 180
AKLAGIPDGV+NVVPGFG TAGAA+ SHMDID V FTGST GR +MQAAA SNLK VSL
Sbjct: 201 AKLAGIPDGVINVVPGFGATAGAAVSSHMDIDAVSFTGSTQTGREIMQAAAKSNLKHVSL 260
Query: 181 ELGGKSPLLIFDDADLDTAADVALLGNLYNKGEICVASSRVFVQEGIYDKFEKKLLEKAK 240
ELGGKSPL+IFDDAD+D KGE+CVASSRVFVQEGIYD+FEKKL+EKAK
Sbjct: 261 ELGGKSPLIIFDDADID-------------KGEVCVASSRVFVQEGIYDEFEKKLVEKAK 307
Query: 241 AWLVGDPFDPTVRQGPQISERHFDRILSYIEHGKREGATLLTGGKPIGDKGYYIEPTIFT 300
W++GDPFDP V+QGPQ+ ++ F+++LSYIEHGK+EGATLLTGGK +G+KGYYIEPTIF+
Sbjct: 308 TWVIGDPFDPKVQQGPQVDKKQFEKVLSYIEHGKKEGATLLTGGKTVGNKGYYIEPTIFS 367
Query: 301 NVKEDMIIAKEEIFGPVMALMKFKTVEEAIKSANNTQYGLAAGIVTKDLNVANTVSRSIR 360
N+K+DM+IA++EIFGPVMAL KFKT+EEAIKSANNT+YGLAAGIVTK+L++ANTVSRSIR
Sbjct: 368 NIKDDMVIAQDEIFGPVMALKKFKTIEEAIKSANNTRYGLAAGIVTKNLDIANTVSRSIR 427
Query: 361 AGIIWINCYFGFSMDCPYGGYKMSGFGREYGLESLYKYLQIKSVVTPIYNSPWL 414
AG IWINCYF F D P+GGYKMSGFGR+YGLE+L+KYLQ+KSVVTPIYNSPWL
Sbjct: 428 AGTIWINCYFAFGDDIPFGGYKMSGFGRDYGLEALHKYLQVKSVVTPIYNSPWL 481
|
Source: Medicago truncatula Species: Medicago truncatula Genus: Medicago Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST
Original result of BLAST against Gene Ontology (AMIGO)
| ID |
Alignment graph |
Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 414 | ||||||
| TAIR|locus:505006369 | 501 | ALDH2C4 "AT3G24503" [Arabidops | 0.995 | 0.822 | 0.673 | 2.3e-149 | |
| TAIR|locus:2097845 | 538 | ALDH2B4 "AT3G48000" [Arabidops | 0.995 | 0.765 | 0.512 | 2.9e-112 | |
| MGI|MGI:1353450 | 501 | Aldh1a1 "aldehyde dehydrogenas | 0.980 | 0.810 | 0.509 | 9.7e-112 | |
| RGD|2087 | 501 | Aldh1a1 "aldehyde dehydrogenas | 0.980 | 0.810 | 0.502 | 2.3e-110 | |
| UNIPROTKB|E2RMX7 | 496 | ALDH1A1 "Uncharacterized prote | 0.985 | 0.822 | 0.504 | 4.8e-110 | |
| UNIPROTKB|J9NS92 | 501 | ALDH1A1 "Uncharacterized prote | 0.985 | 0.814 | 0.504 | 4.8e-110 | |
| UNIPROTKB|P27463 | 509 | ALDH1A1 "Retinal dehydrogenase | 0.980 | 0.797 | 0.509 | 6.1e-110 | |
| UNIPROTKB|P00352 | 501 | ALDH1A1 "Retinal dehydrogenase | 0.985 | 0.814 | 0.5 | 1.3e-109 | |
| TAIR|locus:2034855 | 534 | ALDH2B7 "AT1G23800" [Arabidops | 1.0 | 0.775 | 0.490 | 9e-109 | |
| RGD|620252 | 501 | Aldh1a7 "aldehyde dehydrogenas | 0.980 | 0.810 | 0.504 | 2.4e-108 |
| TAIR|locus:505006369 ALDH2C4 "AT3G24503" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1458 (518.3 bits), Expect = 2.3e-149, P = 2.3e-149
Identities = 278/413 (67%), Positives = 326/413 (78%)
Query: 3 KFADLIEEHVEEXXXXXXXXXGKVYLRAKTAEIPGAAEFLRFFAGAADKIHGEVLKMSSE 62
KFADLIEE++EE GK++ K A+IP A R+ AGAADKIHGE LKM+ +
Sbjct: 89 KFADLIEENIEELAKLDAVDGGKLFQLGKYADIPATAGHFRYNAGAADKIHGETLKMTRQ 148
Query: 63 -LQGYTLREPVGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLTALYYAHLA 121
L GYTL+EP+GVVG+IIPWNFP+ MF KV+PA+AAGCTM+VKPAEQT L+AL+YAHL+
Sbjct: 149 SLFGYTLKEPIGVVGNIIPWNFPSIMFATKVAPAMAAGCTMVVKPAEQTSLSALFYAHLS 208
Query: 122 KLAGIPDGVLNVVPGFGPTAGAAICSHMDIDYVCFTGSTDVGRLVMQAAAASNLKQVSLE 181
K AGIPDGVLN+V GFG TAGAAI SHMD+D V FTGSTDVGR +MQAAAASNLK+VSLE
Sbjct: 209 KEAGIPDGVLNIVTGFGSTAGAAIASHMDVDKVSFTGSTDVGRKIMQAAAASNLKKVSLE 268
Query: 182 LGGKSPXXXXXXXXXXXXXXXXXXGNLYNKGEICVASSRVFVQEGIYDKFXXXXXXXXXX 241
LGGKSP G YNKGEICVASSRVFVQEGIYDK
Sbjct: 269 LGGKSPLLIFNDADIDKAADLALLGCFYNKGEICVASSRVFVQEGIYDKVVEKLVEKAKD 328
Query: 242 WLVGDPFDPTVRQGPQISERHFDRILSYIEHGKREGATLLTGGKPIGDKGYYIEPTIFTN 301
W VGDPFD T RQGPQ+ +R F++ILSYIEHGK EGATLLTGGK IGDKGY+I+PTIF +
Sbjct: 329 WTVGDPFDSTARQGPQVDKRQFEKILSYIEHGKNEGATLLTGGKAIGDKGYFIQPTIFAD 388
Query: 302 VKEDMIIAKEEIFGPVMALMKFKTVEEAIKSANNTQYGLAAGIVTKDLNVANTVSRSIRA 361
V EDM I ++EIFGPVM+LMKFKTVEE IK ANNT+YGLAAGI+++D+++ NTVSRSI+A
Sbjct: 389 VTEDMKIYQDEIFGPVMSLMKFKTVEEGIKCANNTKYGLAAGILSQDIDLINTVSRSIKA 448
Query: 362 GIIWINCYFGFSMDCPYGGYKMSGFGREYGLESLYKYLQIKSVVTPIYNSPWL 414
GIIW+NCYFGF +DCPYGGYKMSG RE G+++L YLQ KSVV P++NSPW+
Sbjct: 449 GIIWVNCYFGFDLDCPYGGYKMSGNCRESGMDALDNYLQTKSVVMPLHNSPWM 501
|
|
| TAIR|locus:2097845 ALDH2B4 "AT3G48000" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1108 (395.1 bits), Expect = 2.9e-112, P = 2.9e-112
Identities = 211/412 (51%), Positives = 274/412 (66%)
Query: 3 KFADLIEEHVEEXXXXXXXXXGKVYLRAKTAEIPGAAEFLRFFAGAADKIHGEVLKMSSE 62
+FADL+E+H EE GK Y ++ TAEIP A R++AG ADKIHG +
Sbjct: 127 RFADLVEKHSEELASLETWDNGKPYQQSLTAEIPMFARLFRYYAGWADKIHGLTIPADGN 186
Query: 63 LQGYTLREPVGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLTALYYAHLAK 122
Q +TL EP+GV G IIPWNFP MF KV PALA G T+++K AEQTPLTA Y L
Sbjct: 187 YQVHTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLTAFYAGKLFL 246
Query: 123 LAGIPDGVLNVVPGFGPTAGAAICSHMDIDYVCFTGSTDVGRLVMQAAAASNLKQVSLEL 182
AG+P GVLN+V GFG TAGAA+ SHMD+D + FTGSTD G++++ AA SNLK V+LEL
Sbjct: 247 EAGLPPGVLNIVSGFGATAGAALASHMDVDKLAFTGSTDTGKVILGLAANSNLKPVTLEL 306
Query: 183 GGKSPXXXXXXXXXXXXXXXXXXGNLYNKGEICVASSRVFVQEGIYDKFXXXXXXXXXXW 242
GGKSP +N+G+ C A SR FV E +YD+F
Sbjct: 307 GGKSPFIVFEDADIDKAVELAHFALFFNQGQCCCAGSRTFVHEKVYDEFVEKSKARALKR 366
Query: 243 LVGDPFDPTVRQGPQISERHFDRILSYIEHGKREGATLLTGGKPIGDKGYYIEPTIFTNV 302
+VGDPF + QGPQI + F++++ YI+ G ATL GG IGDKGY+I+PT+F+NV
Sbjct: 367 VVGDPFRKGIEQGPQIDLKQFEKVMKYIKSGIESNATLECGGDQIGDKGYFIQPTVFSNV 426
Query: 303 KEDMIIAKEEIFGPVMALMKFKTVEEAIKSANNTQYGLAAGIVTKDLNVANTVSRSIRAG 362
K+DM+IA++EIFGPV +++KF V+E IK AN T+YGLAAG+ TK+L+ AN VSR+++AG
Sbjct: 427 KDDMLIAQDEIFGPVQSILKFSDVDEVIKRANETKYGLAAGVFTKNLDTANRVSRALKAG 486
Query: 363 IIWINCYFGFSMDCPYGGYKMSGFGREYGLESLYKYLQIKSVVTPIYNSPWL 414
+W+NC+ F P+GGYKMSG GRE G+ SL YLQIK+VVT + W+
Sbjct: 487 TVWVNCFDVFDAAIPFGGYKMSGNGREKGIYSLNNYLQIKAVVTALNKPAWI 538
|
|
| MGI|MGI:1353450 Aldh1a1 "aldehyde dehydrogenase family 1, subfamily A1" [Mus musculus (taxid:10090)] | Back alignment and assigned GO terms |
|---|
Score = 1103 (393.3 bits), Expect = 9.7e-112, P = 9.7e-112
Identities = 207/406 (50%), Positives = 277/406 (68%)
Query: 3 KFADLIEEHVEEXXXXXXXXXGKVYLRAKTAEIPGAAEFLRFFAGAADKIHGEVLKMSSE 62
K ADL+E GKV+ A +++ G + L++ AG ADKIHG+ + +
Sbjct: 91 KLADLMERDRLLLATMEALNGGKVFANAYLSDLGGCIKALKYCAGWADKIHGQTIPSDGD 150
Query: 63 LQGYTLREPVGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLTALYYAHLAK 122
+ YT REP+GV G IIPWNFP MF K+ PAL+ G T++VKPAEQTPLTAL+ A L K
Sbjct: 151 IFTYTRREPIGVCGQIIPWNFPMLMFIWKIGPALSCGNTVVVKPAEQTPLTALHLASLIK 210
Query: 123 LAGIPDGVLNVVPGFGPTAGAAICSHMDIDYVCFTGSTDVGRLVMQAAAASNLKQVSLEL 182
AG P GV+N+VPG+GPTAGAAI SHMD+D V FTGST VG+L+ +AA SNLK+V+LEL
Sbjct: 211 EAGFPPGVVNIVPGYGPTAGAAISSHMDVDKVAFTGSTQVGKLIKEAAGKSNLKRVTLEL 270
Query: 183 GGKSPXXXXXXXXXXXXXXXXXXGNLYNKGEICVASSRVFVQEGIYDKFXXXXXXXXXXW 242
GGKSP G Y++G+ CVA+SR+FV+E +YD+F +
Sbjct: 271 GGKSPCIVFADADLDIAVEFAHHGVFYHQGQCCVAASRIFVEESVYDEFVKRSVERAKKY 330
Query: 243 LVGDPFDPTVRQGPQISERHFDRILSYIEHGKREGATLLTGGKPIGDKGYYIEPTIFTNV 302
++G+P P + QGPQI + D+IL IE GK+EGA L GG G+KG++++PT+F+NV
Sbjct: 331 VLGNPLTPGINQGPQIDKEQHDKILDLIESGKKEGAKLECGGGRWGNKGFFVQPTVFSNV 390
Query: 303 KEDMIIAKEEIFGPVMALMKFKTVEEAIKSANNTQYGLAAGIVTKDLNVANTVSRSIRAG 362
++M IAKEEIFGPV +MKFK+V++ IK ANNT YGLAAG+ TKDL+ A TVS +++AG
Sbjct: 391 TDEMRIAKEEIFGPVQQIMKFKSVDDVIKRANNTTYGLAAGLFTKDLDKAITVSSALQAG 450
Query: 363 IIWINCYFGFSMDCPYGGYKMSGFGREYGLESLYKYLQIKSVVTPI 408
++W+NCY S CP+GG+KMSG GRE G LY+Y ++K+V I
Sbjct: 451 VVWVNCYMMLSAQCPFGGFKMSGNGRELGEHGLYEYTELKTVAMKI 496
|
|
| RGD|2087 Aldh1a1 "aldehyde dehydrogenase 1 family, member A1" [Rattus norvegicus (taxid:10116)] | Back alignment and assigned GO terms |
|---|
Score = 1090 (388.8 bits), Expect = 2.3e-110, P = 2.3e-110
Identities = 204/406 (50%), Positives = 277/406 (68%)
Query: 3 KFADLIEEHVEEXXXXXXXXXGKVYLRAKTAEIPGAAEFLRFFAGAADKIHGEVLKMSSE 62
K ADL+E GKV+ A +++ G+ + L++ AG ADKIHG+ + +
Sbjct: 91 KLADLMERDRLLLATIEAINGGKVFANAYLSDLGGSIKALKYCAGWADKIHGQTIPSDGD 150
Query: 63 LQGYTLREPVGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLTALYYAHLAK 122
+ +T REP+GV G IIPWNFP MF K+ PAL+ G T++VKPAEQTPLTAL+ A L K
Sbjct: 151 IFTFTRREPIGVCGQIIPWNFPLLMFIWKIGPALSCGNTVVVKPAEQTPLTALHMASLIK 210
Query: 123 LAGIPDGVLNVVPGFGPTAGAAICSHMDIDYVCFTGSTDVGRLVMQAAAASNLKQVSLEL 182
AG P GV+N+VPG+GPTAGAAI SHMD+D V FTGST VG+L+ +AA SNLK+V+LEL
Sbjct: 211 EAGFPPGVVNIVPGYGPTAGAAISSHMDVDKVAFTGSTQVGKLIKEAAGKSNLKRVTLEL 270
Query: 183 GGKSPXXXXXXXXXXXXXXXXXXGNLYNKGEICVASSRVFVQEGIYDKFXXXXXXXXXXW 242
GGKSP G Y++G+ CVA+SR+FV+E +YD+F +
Sbjct: 271 GGKSPCIVFADADLDIAVEFAHHGVFYHQGQCCVAASRIFVEESVYDEFVRKSVERAKKY 330
Query: 243 LVGDPFDPTVRQGPQISERHFDRILSYIEHGKREGATLLTGGKPIGDKGYYIEPTIFTNV 302
++G+P + QGPQI + D+IL IE GK+EGA L GG G+KG++++PT+F+NV
Sbjct: 331 VLGNPLTQGINQGPQIDKEQHDKILDLIESGKKEGAKLECGGGRWGNKGFFVQPTVFSNV 390
Query: 303 KEDMIIAKEEIFGPVMALMKFKTVEEAIKSANNTQYGLAAGIVTKDLNVANTVSRSIRAG 362
++M IAKEEIFGPV +MKFK++++ IK ANNT YGLAAG+ TKDL+ A TVS +++AG
Sbjct: 391 TDEMRIAKEEIFGPVQQIMKFKSIDDVIKRANNTTYGLAAGVFTKDLDRAITVSSALQAG 450
Query: 363 IIWINCYFGFSMDCPYGGYKMSGFGREYGLESLYKYLQIKSVVTPI 408
++W+NCY S CP+GG+KMSG GRE G LY+Y ++K+V I
Sbjct: 451 VVWVNCYMILSAQCPFGGFKMSGNGRELGEHGLYEYTELKTVAMKI 496
|
|
| UNIPROTKB|E2RMX7 ALDH1A1 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] | Back alignment and assigned GO terms |
|---|
Score = 1087 (387.7 bits), Expect = 4.8e-110, P = 4.8e-110
Identities = 206/408 (50%), Positives = 275/408 (67%)
Query: 1 MWKFADLIEEHVEEXXXXXXXXXGKVYLRAKTAEIPGAAEFLRFFAGAADKIHGEVLKMS 60
++K ADLIE GK++ + T ++ G LR+ AG ADKIHG + +
Sbjct: 84 IYKLADLIERDRLLLATMESINGGKLFSNSYTLDLGGCVATLRYCAGWADKIHGRTIPVD 143
Query: 61 SELQGYTLREPVGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLTALYYAHL 120
GYT EP+GV G IIPWNFP MF K+ PAL G T++VKPAEQTPLTAL+ A L
Sbjct: 144 GNFFGYTRHEPIGVCGQIIPWNFPLFMFIWKIGPALCCGNTVVVKPAEQTPLTALHVASL 203
Query: 121 AKLAGIPDGVLNVVPGFGPTAGAAICSHMDIDYVCFTGSTDVGRLVMQAAAASNLKQVSL 180
+ AG P GV+N+VPG+GPTAGAAI SHMDID V FTGST+VG+++ +AA SNLK+V+L
Sbjct: 204 IQEAGFPPGVVNIVPGYGPTAGAAISSHMDIDKVAFTGSTEVGKMIKEAAGKSNLKRVTL 263
Query: 181 ELGGKSPXXXXXXXXXXXXXXXXXXGNLYNKGEICVASSRVFVQEGIYDKFXXXXXXXXX 240
ELGGKSP Y++G+ C+A+SR+FV+E IYD+F
Sbjct: 264 ELGGKSPFIVFADSDLDSAVEVAHQALFYHQGQCCIAASRLFVEESIYDEFVRRSVERAK 323
Query: 241 XWLVGDPFDPTVRQGPQISERHFDRILSYIEHGKREGATLLTGGKPIGDKGYYIEPTIFT 300
+++G+P P V QGPQI ++ +++IL IE GK+EGA L GG P G+KG++I+PT+F+
Sbjct: 324 KYVLGNPLTPGVSQGPQIDKKQYEKILDLIESGKKEGAKLECGGGPWGNKGFFIQPTVFS 383
Query: 301 NVKEDMIIAKEEIFGPVMALMKFKTVEEAIKSANNTQYGLAAGIVTKDLNVANTVSRSIR 360
NV ++M IAKEEIFGPV +MKFK++++ IK ANNT YGLAAGI TKD++ A TVS +++
Sbjct: 384 NVTDEMRIAKEEIFGPVQQIMKFKSLDDVIKRANNTHYGLAAGIFTKDIDKAITVSSALQ 443
Query: 361 AGIIWINCYFGFSMDCPYGGYKMSGFGREYGLESLYKYLQIKSVVTPI 408
AG +W+NCY S CP+GG+KMSG GRE G L +Y ++K V I
Sbjct: 444 AGTVWVNCYSVVSPQCPFGGFKMSGNGRELGEYGLQEYTEVKMVTMKI 491
|
|
| UNIPROTKB|J9NS92 ALDH1A1 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] | Back alignment and assigned GO terms |
|---|
Score = 1087 (387.7 bits), Expect = 4.8e-110, P = 4.8e-110
Identities = 206/408 (50%), Positives = 275/408 (67%)
Query: 1 MWKFADLIEEHVEEXXXXXXXXXGKVYLRAKTAEIPGAAEFLRFFAGAADKIHGEVLKMS 60
++K ADLIE GK++ + T ++ G LR+ AG ADKIHG + +
Sbjct: 89 IYKLADLIERDRLLLATMESINGGKLFSNSYTLDLGGCVATLRYCAGWADKIHGRTIPVD 148
Query: 61 SELQGYTLREPVGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLTALYYAHL 120
GYT EP+GV G IIPWNFP MF K+ PAL G T++VKPAEQTPLTAL+ A L
Sbjct: 149 GNFFGYTRHEPIGVCGQIIPWNFPLFMFIWKIGPALCCGNTVVVKPAEQTPLTALHVASL 208
Query: 121 AKLAGIPDGVLNVVPGFGPTAGAAICSHMDIDYVCFTGSTDVGRLVMQAAAASNLKQVSL 180
+ AG P GV+N+VPG+GPTAGAAI SHMDID V FTGST+VG+++ +AA SNLK+V+L
Sbjct: 209 IQEAGFPPGVVNIVPGYGPTAGAAISSHMDIDKVAFTGSTEVGKMIKEAAGKSNLKRVTL 268
Query: 181 ELGGKSPXXXXXXXXXXXXXXXXXXGNLYNKGEICVASSRVFVQEGIYDKFXXXXXXXXX 240
ELGGKSP Y++G+ C+A+SR+FV+E IYD+F
Sbjct: 269 ELGGKSPFIVFADSDLDSAVEVAHQALFYHQGQCCIAASRLFVEESIYDEFVRRSVERAK 328
Query: 241 XWLVGDPFDPTVRQGPQISERHFDRILSYIEHGKREGATLLTGGKPIGDKGYYIEPTIFT 300
+++G+P P V QGPQI ++ +++IL IE GK+EGA L GG P G+KG++I+PT+F+
Sbjct: 329 KYVLGNPLTPGVSQGPQIDKKQYEKILDLIESGKKEGAKLECGGGPWGNKGFFIQPTVFS 388
Query: 301 NVKEDMIIAKEEIFGPVMALMKFKTVEEAIKSANNTQYGLAAGIVTKDLNVANTVSRSIR 360
NV ++M IAKEEIFGPV +MKFK++++ IK ANNT YGLAAGI TKD++ A TVS +++
Sbjct: 389 NVTDEMRIAKEEIFGPVQQIMKFKSLDDVIKRANNTHYGLAAGIFTKDIDKAITVSSALQ 448
Query: 361 AGIIWINCYFGFSMDCPYGGYKMSGFGREYGLESLYKYLQIKSVVTPI 408
AG +W+NCY S CP+GG+KMSG GRE G L +Y ++K V I
Sbjct: 449 AGTVWVNCYSVVSPQCPFGGFKMSGNGRELGEYGLQEYTEVKMVTMKI 496
|
|
| UNIPROTKB|P27463 ALDH1A1 "Retinal dehydrogenase 1" [Gallus gallus (taxid:9031)] | Back alignment and assigned GO terms |
|---|
Score = 1086 (387.4 bits), Expect = 6.1e-110, P = 6.1e-110
Identities = 207/406 (50%), Positives = 268/406 (66%)
Query: 3 KFADLIEEHVEEXXXXXXXXXGKVYLRAKTAEIPGAAEFLRFFAGAADKIHGEVLKMSSE 62
K ADL+E GK++ A ++ + +R+ AG ADKIHG + M
Sbjct: 99 KLADLVERDRLTLATMEAIDGGKLFSTAYLMDLGACIKTIRYCAGWADKIHGRTVPMDGN 158
Query: 63 LQGYTLREPVGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLTALYYAHLAK 122
+T EPVGV G IIPWNFP MF K++PAL G T++VKPAEQTPL+ALY L K
Sbjct: 159 FFTFTRHEPVGVCGQIIPWNFPLVMFIWKIAPALCCGNTVVVKPAEQTPLSALYMGSLIK 218
Query: 123 LAGIPDGVLNVVPGFGPTAGAAICSHMDIDYVCFTGSTDVGRLVMQAAAASNLKQVSLEL 182
AG P GV+N+VPGFGPTAGAAI HMDID V FTGST+VG+L+ +AA +NLK+V+LEL
Sbjct: 219 EAGFPPGVVNIVPGFGPTAGAAISHHMDIDKVSFTGSTEVGKLIKEAAGKTNLKRVTLEL 278
Query: 183 GGKSPXXXXXXXXXXXXXXXXXXGNLYNKGEICVASSRVFVQEGIYDKFXXXXXXXXXXW 242
GGKSP G Y++G+ C+A SR+FV+E IYD+F +
Sbjct: 279 GGKSPNIIFADADLDEAAEFAHIGLFYHQGQCCIAGSRIFVEEPIYDEFVRRSIERAKKY 338
Query: 243 LVGDPFDPTVRQGPQISERHFDRILSYIEHGKREGATLLTGGKPIGDKGYYIEPTIFTNV 302
+GDP P V+QGPQI + F +IL IE GK+EGA L GG P G+KGY+I+PT+F+NV
Sbjct: 339 TLGDPLLPGVQQGPQIDKEQFQKILDLIESGKKEGAKLECGGGPWGNKGYFIQPTVFSNV 398
Query: 303 KEDMIIAKEEIFGPVMALMKFKTVEEAIKSANNTQYGLAAGIVTKDLNVANTVSRSIRAG 362
+DM IAKEEIFGPV +MKFKT++E IK ANNT YGLAA + TKD++ A T + +++AG
Sbjct: 399 TDDMRIAKEEIFGPVQQIMKFKTIDEVIKRANNTTYGLAAAVFTKDIDKALTFASALQAG 458
Query: 363 IIWINCYFGFSMDCPYGGYKMSGFGREYGLESLYKYLQIKSVVTPI 408
+W+NCY FS CP+GG+KMSG GRE G L +Y ++K+V I
Sbjct: 459 TVWVNCYSAFSAQCPFGGFKMSGNGRELGEYGLQEYTEVKTVTIKI 504
|
|
| UNIPROTKB|P00352 ALDH1A1 "Retinal dehydrogenase 1" [Homo sapiens (taxid:9606)] | Back alignment and assigned GO terms |
|---|
Score = 1083 (386.3 bits), Expect = 1.3e-109, P = 1.3e-109
Identities = 204/408 (50%), Positives = 274/408 (67%)
Query: 1 MWKFADLIEEHVEEXXXXXXXXXGKVYLRAKTAEIPGAAEFLRFFAGAADKIHGEVLKMS 60
++K ADLIE GK+Y A ++ G + LR+ AG ADKI G + +
Sbjct: 89 LYKLADLIERDRLLLATMESMNGGKLYSNAYLNDLAGCIKTLRYCAGWADKIQGRTIPID 148
Query: 61 SELQGYTLREPVGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLTALYYAHL 120
YT EP+GV G IIPWNFP M K+ PAL+ G T++VKPAEQTPLTAL+ A L
Sbjct: 149 GNFFTYTRHEPIGVCGQIIPWNFPLVMLIWKIGPALSCGNTVVVKPAEQTPLTALHVASL 208
Query: 121 AKLAGIPDGVLNVVPGFGPTAGAAICSHMDIDYVCFTGSTDVGRLVMQAAAASNLKQVSL 180
K AG P GV+N+VPG+GPTAGAAI SHMDID V FTGST+VG+L+ +AA SNLK+V+L
Sbjct: 209 IKEAGFPPGVVNIVPGYGPTAGAAISSHMDIDKVAFTGSTEVGKLIKEAAGKSNLKRVTL 268
Query: 181 ELGGKSPXXXXXXXXXXXXXXXXXXGNLYNKGEICVASSRVFVQEGIYDKFXXXXXXXXX 240
ELGGKSP G Y++G+ C+A+SR+FV+E IYD+F
Sbjct: 269 ELGGKSPCIVLADADLDNAVEFAHHGVFYHQGQCCIAASRIFVEESIYDEFVRRSVERAK 328
Query: 241 XWLVGDPFDPTVRQGPQISERHFDRILSYIEHGKREGATLLTGGKPIGDKGYYIEPTIFT 300
+++G+P P V QGPQI + +D+IL IE GK+EGA L GG P G+KGY+++PT+F+
Sbjct: 329 KYILGNPLTPGVTQGPQIDKEQYDKILDLIESGKKEGAKLECGGGPWGNKGYFVQPTVFS 388
Query: 301 NVKEDMIIAKEEIFGPVMALMKFKTVEEAIKSANNTQYGLAAGIVTKDLNVANTVSRSIR 360
NV ++M IAKEEIFGPV +MKFK++++ IK ANNT YGL+AG+ TKD++ A T+S +++
Sbjct: 389 NVTDEMRIAKEEIFGPVQQIMKFKSLDDVIKRANNTFYGLSAGVFTKDIDKAITISSALQ 448
Query: 361 AGIIWINCYFGFSMDCPYGGYKMSGFGREYGLESLYKYLQIKSVVTPI 408
AG +W+NCY S CP+GG+KMSG GRE G ++Y ++K+V I
Sbjct: 449 AGTVWVNCYGVVSAQCPFGGFKMSGNGRELGEYGFHEYTEVKTVTVKI 496
|
|
| TAIR|locus:2034855 ALDH2B7 "AT1G23800" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1075 (383.5 bits), Expect = 9.0e-109, P = 9.0e-109
Identities = 203/414 (49%), Positives = 270/414 (65%)
Query: 1 MWKFADLIEEHVEEXXXXXXXXXGKVYLRAKTAEIPGAAEFLRFFAGAADKIHGEVLKMS 60
+++FADLIE+H +E GK Y ++ E+P A R++AG ADKIHG +
Sbjct: 121 LFRFADLIEKHNDEIAALETWDNGKPYEQSAQIEVPMLARVFRYYAGWADKIHGMTMPGD 180
Query: 61 SELQGYTLREPVGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLTALYYAHL 120
TL EP+GV G IIPWNFP M K+ PALA G T+++K AEQTPL+AL L
Sbjct: 181 GPHHVQTLHEPIGVAGQIIPWNFPLLMLSWKLGPALACGNTVVLKTAEQTPLSALLVGKL 240
Query: 121 AKLAGIPDGVLNVVPGFGPTAGAAICSHMDIDYVCFTGSTDVGRLVMQAAAASNLKQVSL 180
AG+PDGV+N+V GFG TAGAAI SHMD+D V FTGSTDVG+++++ A+ SNLK V+L
Sbjct: 241 LHEAGLPDGVVNIVSGFGATAGAAIASHMDVDKVAFTGSTDVGKIILELASKSNLKAVTL 300
Query: 181 ELGGKSPXXXXXXXXXXXXXXXXXXGNLYNKGEICVASSRVFVQEGIYDKFXXXXXXXXX 240
ELGGKSP +N+G+ C A SR FV E +YD+F
Sbjct: 301 ELGGKSPFIVCEDADVDQAVELAHFALFFNQGQCCCAGSRTFVHERVYDEFVEKAKARAL 360
Query: 241 XWLVGDPFDPTVRQGPQISERHFDRILSYIEHGKREGATLLTGGKPIGDKGYYIEPTIFT 300
VGDPF + QGPQ+ F++IL YI+HG GATL GG +G KGYYI+PT+F+
Sbjct: 361 KRNVGDPFKSGIEQGPQVDSEQFNKILKYIKHGVEAGATLQAGGDRLGSKGYYIQPTVFS 420
Query: 301 NVKEDMIIAKEEIFGPVMALMKFKTVEEAIKSANNTQYGLAAGIVTKDLNVANTVSRSIR 360
+VK+DM+IA +EIFGPV ++KFK ++E I ANN++YGLAAG+ T++L+ A+ + R++R
Sbjct: 421 DVKDDMLIATDEIFGPVQTILKFKDLDEVIARANNSRYGLAAGVFTQNLDTAHRLMRALR 480
Query: 361 AGIIWINCYFGFSMDCPYGGYKMSGFGREYGLESLYKYLQIKSVVTPIYNSPWL 414
G +WINC+ P+GGYKMSG GRE G+ SL YLQ+K+VVT + N WL
Sbjct: 481 VGTVWINCFDVLDASIPFGGYKMSGIGREKGIYSLNNYLQVKAVVTSLKNPAWL 534
|
|
| RGD|620252 Aldh1a7 "aldehyde dehydrogenase family 1, subfamily A7" [Rattus norvegicus (taxid:10116)] | Back alignment and assigned GO terms |
|---|
Score = 1071 (382.1 bits), Expect = 2.4e-108, P = 2.4e-108
Identities = 205/406 (50%), Positives = 275/406 (67%)
Query: 3 KFADLIEEHVEEXXXXXXXXXGKVYLRAKTAEIPGAAEFLRFFAGAADKIHGEVLKMSSE 62
K ADL+E GK++ A + + + L++FAG ADKIHG+ + +
Sbjct: 91 KLADLMERDRVLLATMESMNAGKIFTHAYLLDTEVSIKALKYFAGWADKIHGQTIPSDGD 150
Query: 63 LQGYTLREPVGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLTALYYAHLAK 122
+ YT REP+GV G IIPWN P +F K+ AL+ G T+IVKPAEQTPLTALY A L K
Sbjct: 151 VFTYTRREPIGVCGQIIPWNGPLILFIWKIGAALSCGNTVIVKPAEQTPLTALYMASLIK 210
Query: 123 LAGIPDGVLNVVPGFGPTAGAAICSHMDIDYVCFTGSTDVGRLVMQAAAASNLKQVSLEL 182
AG P GV+NVVPG+G TAGAAI SHMDID V FTGST+VG+L+ +AA SNLK+V+LEL
Sbjct: 211 EAGFPPGVVNVVPGYGSTAGAAISSHMDIDKVSFTGSTEVGKLIKEAAGKSNLKRVTLEL 270
Query: 183 GGKSPXXXXXXXXXXXXXXXXXXGNLYNKGEICVASSRVFVQEGIYDKFXXXXXXXXXXW 242
GGKSP G +++G+ICVA+SR+FV+E IYD+F +
Sbjct: 271 GGKSPCIVFADADLDSAVEFAHQGVFFHQGQICVAASRLFVEESIYDEFVRRSVERAKKY 330
Query: 243 LVGDPFDPTVRQGPQISERHFDRILSYIEHGKREGATLLTGGKPIGDKGYYIEPTIFTNV 302
++G+P D + QGPQI + +IL IE GK+EGA L GG G+KG++++PT+F+NV
Sbjct: 331 VLGNPLDSGISQGPQIDKEQHAKILDLIESGKKEGAKLECGGGRWGNKGFFVQPTVFSNV 390
Query: 303 KEDMIIAKEEIFGPVMALMKFKTVEEAIKSANNTQYGLAAGIVTKDLNVANTVSRSIRAG 362
++M IAKEEIFGPV +MKFK+++E IK ANNT YGLAAG+ TKDL+ A TVS +++AG
Sbjct: 391 TDEMRIAKEEIFGPVQQIMKFKSIDEVIKRANNTPYGLAAGVFTKDLDRAITVSSALQAG 450
Query: 363 IIWINCYFGFSMDCPYGGYKMSGFGREYGLESLYKYLQIKSVVTPI 408
+W+NCY S+ CP+GG+KMSG GRE G + +Y+Y ++K+V I
Sbjct: 451 TVWVNCYLTLSVQCPFGGFKMSGNGREMGEQGVYEYTELKTVAMKI 496
|
|
Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries
Original result of BLAST against SWISS-PROT
| ID | Name | Annotated EC number | Identity | Query coverage | Hit coverage | RBH(Q2H) | RBH(H2Q) |
| P51647 | AL1A1_RAT | 1, ., 2, ., 1, ., 3, 6 | 0.5394 | 0.9806 | 0.8103 | yes | no |
| P42041 | ALDH_ALTAL | 1, ., 2, ., 1, ., 3 | 0.5248 | 0.9710 | 0.8088 | N/A | no |
| P41751 | ALDH_ASPNG | 1, ., 2, ., 1, ., 3 | 0.5522 | 0.9685 | 0.8068 | yes | no |
| P40108 | ALDH_DAVTA | 1, ., 2, ., 1, ., 3 | 0.5323 | 0.9685 | 0.8084 | N/A | no |
| O34660 | ALDH4_BACSU | 1, ., 2, ., 1, ., 3 | 0.4678 | 0.9734 | 0.8141 | yes | no |
| Q27640 | ALDH_ENCBU | 1, ., 2, ., 1, ., 3 | 0.5173 | 0.9758 | 0.8128 | N/A | no |
| P00352 | AL1A1_HUMAN | 1, ., 2, ., 1, ., 3, 6 | 0.5294 | 0.9855 | 0.8143 | yes | no |
| P15437 | AL1A1_HORSE | 1, ., 2, ., 1, ., 3, 6 | 0.5343 | 0.9855 | 0.816 | yes | no |
| Q56YU0 | AL2C4_ARATH | 1, ., 2, ., 1, ., 3 | 0.7360 | 0.9951 | 0.8223 | yes | no |
| P48644 | AL1A1_BOVIN | 1, ., 2, ., 1, ., 3, 6 | 0.5394 | 0.9806 | 0.8103 | yes | no |
| Q28399 | ALDH1_ELEED | 1, ., 2, ., 1, ., 3 | 0.5245 | 0.9855 | 0.8143 | N/A | no |
| P51977 | AL1A1_SHEEP | 1, ., 2, ., 1, ., 3, 6 | 0.5394 | 0.9806 | 0.8103 | N/A | no |
| P81178 | ALDH2_MESAU | 1, ., 2, ., 1, ., 3 | 0.5328 | 0.9879 | 0.818 | N/A | no |
| Q29490 | ALDH1_MACPR | 1, ., 2, ., 1, ., 3 | 0.5245 | 0.9855 | 0.8143 | N/A | no |
| P08157 | ALDH_EMENI | 1, ., 2, ., 1, ., 3 | 0.5522 | 0.9685 | 0.8068 | yes | no |
| O14293 | YF19_SCHPO | 1, ., 2, ., 1, ., - | 0.5124 | 0.9685 | 0.7972 | yes | no |
| Q8HYE4 | AL1A1_MACFA | 1, ., 2, ., 1, ., 3, 6 | 0.5220 | 0.9855 | 0.8143 | N/A | no |
| O74187 | ALDH_AGABI | 1, ., 2, ., 1, ., 3 | 0.5024 | 0.9758 | 0.808 | N/A | no |
| P24549 | AL1A1_MOUSE | 1, ., 2, ., 1, ., 3, 6 | 0.5492 | 0.9806 | 0.8103 | yes | no |
| Q2XQV4 | ALDH2_PIG | 1, ., 2, ., 1, ., 3 | 0.5270 | 0.9806 | 0.7792 | yes | no |
| Q8MI17 | AL1A1_RABIT | 1, ., 2, ., 1, ., 3, 6 | 0.5490 | 0.9855 | 0.8225 | yes | no |
| P86886 | AL1A1_MESAU | 1, ., 2, ., 1, ., 3, 6 | 0.5490 | 0.9855 | 0.816 | N/A | no |
| P27463 | AL1A1_CHICK | 1, ., 2, ., 1, ., 3, 6 | 0.5517 | 0.9806 | 0.7976 | yes | no |
EC Number Prediction by Ezypred Server
Original result from Ezypred Server
Fail to connect to Ezypred Server
EC Number Prediction by EFICAz Software
| Prediction Level | EC number | Confidence of Prediction |
| 3rd Layer | 1.2.1 | 0.976 |
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING
Original result from the STRING server
Fail to connect to STRING server
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST
Original result of RPS-BLAST against CDD database part I
| ID | Alignment Graph | Length |
Definition |
E-value |
| Query | 414 | |||
| PLN02766 | 501 | PLN02766, PLN02766, coniferyl-aldehyde dehydrogena | 0.0 | |
| cd07091 | 476 | cd07091, ALDH_F1-2_Ald2-like, ALDH subfamily: ALDH | 0.0 | |
| cd07142 | 476 | cd07142, ALDH_F2BC, Arabidosis aldehyde dehydrogen | 0.0 | |
| cd07141 | 481 | cd07141, ALDH_F1AB_F2_RALDH1, NAD+-dependent retin | 0.0 | |
| pfam00171 | 459 | pfam00171, Aldedh, Aldehyde dehydrogenase family | 0.0 | |
| PLN02466 | 538 | PLN02466, PLN02466, aldehyde dehydrogenase family | 0.0 | |
| cd07112 | 462 | cd07112, ALDH_GABALDH-PuuC, Escherichia coli NADP+ | 0.0 | |
| cd07078 | 432 | cd07078, ALDH, NAD(P)+ dependent aldehyde dehydrog | 0.0 | |
| cd07143 | 481 | cd07143, ALDH_AldA_AN0554, Aspergillus nidulans al | 0.0 | |
| cd07144 | 484 | cd07144, ALDH_ALD2-YMR170C, Saccharomyces cerevisi | 0.0 | |
| cd07114 | 457 | cd07114, ALDH_DhaS, Uncharacterized Candidatus pel | 0.0 | |
| cd07115 | 453 | cd07115, ALDH_HMSADH_HapE, Pseudomonas fluorescens | 0.0 | |
| COG1012 | 472 | COG1012, PutA, NAD-dependent aldehyde dehydrogenas | 1e-179 | |
| cd07093 | 455 | cd07093, ALDH_F8_HMSADH, Human aldehyde dehydrogen | 1e-177 | |
| PRK13252 | 488 | PRK13252, PRK13252, betaine aldehyde dehydrogenase | 1e-168 | |
| cd07119 | 482 | cd07119, ALDH_BADH-GbsA, Bacillus subtilis NAD+-de | 1e-167 | |
| cd07103 | 451 | cd07103, ALDH_F5_SSADH_GabD, Mitochondrial succina | 1e-165 | |
| cd07109 | 454 | cd07109, ALDH_AAS00426, Uncharacterized Saccharopo | 1e-163 | |
| cd07090 | 457 | cd07090, ALDH_F9_TMBADH, NAD+-dependent 4-trimethy | 1e-161 | |
| cd07118 | 454 | cd07118, ALDH_SNDH, Gluconobacter oxydans L-sorbos | 1e-160 | |
| cd07110 | 456 | cd07110, ALDH_F10_BADH, Arabidopsis betaine aldehy | 1e-155 | |
| cd07138 | 466 | cd07138, ALDH_CddD_SSP0762, Rhodococcus ruber 6-ox | 1e-154 | |
| TIGR01804 | 467 | TIGR01804, BADH, glycine betaine aldehyde dehydrog | 1e-152 | |
| cd07140 | 486 | cd07140, ALDH_F1L_FTFDH, 10-formyltetrahydrofolate | 1e-152 | |
| cd07559 | 480 | cd07559, ALDH_ACDHII_AcoD-like, Ralstonia eutrophu | 1e-152 | |
| cd07092 | 450 | cd07092, ALDH_ABALDH-YdcW, Escherichia coli NAD+-d | 1e-152 | |
| PRK13473 | 475 | PRK13473, PRK13473, gamma-aminobutyraldehyde dehyd | 1e-151 | |
| cd07089 | 459 | cd07089, ALDH_CddD-AldA-like, Rhodococcus ruber 6- | 1e-149 | |
| PLN02467 | 503 | PLN02467, PLN02467, betaine aldehyde dehydrogenase | 1e-144 | |
| cd07139 | 471 | cd07139, ALDH_AldA-Rv0768, Mycobacterium tuberculo | 1e-143 | |
| cd07117 | 475 | cd07117, ALDH_StaphAldA1, Uncharacterized Staphylo | 1e-142 | |
| cd07097 | 473 | cd07097, ALDH_KGSADH-YcbD, Bacillus subtilis NADP+ | 1e-139 | |
| cd07088 | 468 | cd07088, ALDH_LactADH-AldA, Escherichia coli lacta | 1e-138 | |
| PLN02278 | 498 | PLN02278, PLN02278, succinic semialdehyde dehydrog | 1e-135 | |
| TIGR02299 | 488 | TIGR02299, HpaE, 5-carboxymethyl-2-hydroxymuconate | 1e-134 | |
| cd07106 | 446 | cd07106, ALDH_AldA-AAD23400, Streptomyces aureofac | 1e-133 | |
| PRK09847 | 494 | PRK09847, PRK09847, gamma-glutamyl-gamma-aminobuty | 1e-133 | |
| cd07107 | 456 | cd07107, ALDH_PhdK-like, Nocardioides 2-carboxyben | 1e-132 | |
| cd07104 | 431 | cd07104, ALDH_BenzADH-like, ALDH subfamily: NAD(P) | 1e-131 | |
| cd07108 | 457 | cd07108, ALDH_MGR_2402, Magnetospirillum NAD(P)+-d | 1e-130 | |
| TIGR01780 | 448 | TIGR01780, SSADH, succinate-semialdehyde dehydroge | 1e-128 | |
| cd06534 | 367 | cd06534, ALDH-SF, NAD(P)+-dependent aldehyde dehyd | 1e-127 | |
| cd07111 | 480 | cd07111, ALDH_F16, Aldehyde dehydrogenase family 1 | 1e-126 | |
| cd07131 | 478 | cd07131, ALDH_AldH-CAJ73105, Uncharacterized Candi | 1e-126 | |
| cd07149 | 453 | cd07149, ALDH_y4uC, Uncharacterized ALDH (y4uC) wi | 1e-125 | |
| cd07116 | 479 | cd07116, ALDH_ACDHII-AcoD, Ralstonia eutrophus NAD | 1e-123 | |
| cd07113 | 477 | cd07113, ALDH_PADH_NahF, Escherichia coli NAD+-dep | 1e-122 | |
| cd07150 | 451 | cd07150, ALDH_VaniDH_like, Pseudomonas putida vani | 1e-120 | |
| cd07120 | 455 | cd07120, ALDH_PsfA-ACA09737, Pseudomonas putida al | 1e-119 | |
| TIGR03216 | 481 | TIGR03216, OH_muco_semi_DH, 2-hydroxymuconic semia | 1e-119 | |
| cd07099 | 453 | cd07099, ALDH_DDALDH, Methylomonas sp | 1e-117 | |
| cd07145 | 456 | cd07145, ALDH_LactADH_F420-Bios, Methanocaldococcu | 1e-117 | |
| cd07100 | 429 | cd07100, ALDH_SSADH1_GabD1, Mycobacterium tubercul | 1e-109 | |
| cd07086 | 478 | cd07086, ALDH_F7_AASADH-like, NAD+-dependent alpha | 1e-108 | |
| cd07124 | 512 | cd07124, ALDH_PutA-P5CDH-RocA, Delta(1)-pyrroline- | 1e-108 | |
| cd07151 | 465 | cd07151, ALDH_HBenzADH, NADP+-dependent p-hydroxyb | 1e-108 | |
| PRK09407 | 524 | PRK09407, gabD2, succinic semialdehyde dehydrogena | 1e-106 | |
| cd07152 | 443 | cd07152, ALDH_BenzADH, NAD-dependent benzaldehyde | 1e-105 | |
| cd07101 | 454 | cd07101, ALDH_SSADH2_GabD2, Mycobacterium tubercul | 1e-105 | |
| cd07094 | 453 | cd07094, ALDH_F21_LactADH-like, ALDH subfamily: NA | 1e-104 | |
| PRK11241 | 482 | PRK11241, gabD, succinate-semialdehyde dehydrogena | 1e-104 | |
| cd07147 | 452 | cd07147, ALDH_F21_RNP123, Aldehyde dehydrogenase f | 1e-103 | |
| cd07105 | 432 | cd07105, ALDH_SaliADH, Salicylaldehyde dehydrogena | 1e-103 | |
| TIGR03374 | 472 | TIGR03374, ABALDH, 1-pyrroline dehydrogenase | 1e-102 | |
| cd07085 | 478 | cd07085, ALDH_F6_MMSDH, Methylmalonate semialdehyd | 1e-101 | |
| PRK10090 | 409 | PRK10090, PRK10090, aldehyde dehydrogenase A; Prov | 1e-101 | |
| cd07146 | 451 | cd07146, ALDH_PhpJ, Streptomyces putative phosphon | 4e-97 | |
| TIGR04284 | 480 | TIGR04284, aldehy_Rv0768, aldehyde dehydrogenase, | 2e-96 | |
| cd07082 | 473 | cd07082, ALDH_F11_NP-GAPDH, NADP+-dependent non-ph | 3e-96 | |
| cd07098 | 465 | cd07098, ALDH_F15-22, Aldehyde dehydrogenase famil | 6e-93 | |
| cd07102 | 452 | cd07102, ALDH_EDX86601, Uncharacterized aldehyde d | 1e-92 | |
| PRK03137 | 514 | PRK03137, PRK03137, 1-pyrroline-5-carboxylate dehy | 4e-90 | |
| TIGR01237 | 511 | TIGR01237, D1pyr5carbox2, delta-1-pyrroline-5-carb | 6e-84 | |
| TIGR03250 | 472 | TIGR03250, PhnAcAld_DH, putative phosphonoacetalde | 2e-77 | |
| cd07148 | 455 | cd07148, ALDH_RL0313, Uncharacterized ALDH ( RL031 | 9e-74 | |
| PRK09406 | 457 | PRK09406, gabD1, succinic semialdehyde dehydrogena | 1e-73 | |
| cd07083 | 500 | cd07083, ALDH_P5CDH, ALDH subfamily NAD+-dependent | 3e-73 | |
| cd07125 | 518 | cd07125, ALDH_PutA-P5CDH, Delta(1)-pyrroline-5-car | 4e-70 | |
| cd07087 | 426 | cd07087, ALDH_F3-13-14_CALDH-like, ALDH subfamily: | 1e-68 | |
| cd07095 | 431 | cd07095, ALDH_SGSD_AstD, N-succinylglutamate 5-sem | 8e-68 | |
| TIGR01722 | 477 | TIGR01722, MMSDH, methylmalonic acid semialdehyde | 2e-67 | |
| cd07130 | 474 | cd07130, ALDH_F7_AASADH, NAD+-dependent alpha-amin | 2e-66 | |
| cd07133 | 434 | cd07133, ALDH_CALDH_CalB, Coniferyl aldehyde dehyd | 2e-66 | |
| cd07134 | 433 | cd07134, ALDH_AlkH-like, Pseudomonas putida Aldehy | 5e-64 | |
| cd07135 | 436 | cd07135, ALDH_F14-YMR110C, Saccharomyces cerevisia | 9e-64 | |
| cd07136 | 449 | cd07136, ALDH_YwdH-P39616, Bacillus subtilis aldeh | 4e-62 | |
| PRK13968 | 462 | PRK13968, PRK13968, putative succinate semialdehyd | 9e-60 | |
| PRK09457 | 487 | PRK09457, astD, succinylglutamic semialdehyde dehy | 4e-58 | |
| PLN02419 | 604 | PLN02419, PLN02419, methylmalonate-semialdehyde de | 9e-57 | |
| TIGR01238 | 500 | TIGR01238, D1pyr5carbox3, delta-1-pyrroline-5-carb | 2e-56 | |
| PRK11904 | 1038 | PRK11904, PRK11904, bifunctional proline dehydroge | 2e-55 | |
| PTZ00381 | 493 | PTZ00381, PTZ00381, aldehyde dehydrogenase family | 2e-54 | |
| TIGR03240 | 484 | TIGR03240, arg_catab_astD, succinylglutamic semial | 6e-53 | |
| COG4230 | 769 | COG4230, COG4230, Delta 1-pyrroline-5-carboxylate | 9e-53 | |
| PRK11905 | 1208 | PRK11905, PRK11905, bifunctional proline dehydroge | 8e-52 | |
| PLN00412 | 496 | PLN00412, PLN00412, NADP-dependent glyceraldehyde- | 2e-50 | |
| cd07132 | 443 | cd07132, ALDH_F3AB, Aldehyde dehydrogenase family | 3e-49 | |
| cd07137 | 432 | cd07137, ALDH_F3FHI, Plant aldehyde dehydrogenase | 3e-47 | |
| PLN02315 | 508 | PLN02315, PLN02315, aldehyde dehydrogenase family | 4e-47 | |
| cd07123 | 522 | cd07123, ALDH_F4-17_P5CDH, Delta(1)-pyrroline-5-ca | 1e-45 | |
| TIGR01236 | 532 | TIGR01236, D1pyr5carbox1, delta-1-pyrroline-5-carb | 7e-43 | |
| PRK11809 | 1318 | PRK11809, putA, trifunctional transcriptional regu | 1e-36 | |
| PLN02203 | 484 | PLN02203, PLN02203, aldehyde dehydrogenase | 8e-36 | |
| PLN02174 | 484 | PLN02174, PLN02174, aldehyde dehydrogenase family | 5e-27 | |
| PRK11903 | 521 | PRK11903, PRK11903, aldehyde dehydrogenase; Provis | 1e-24 | |
| cd07084 | 442 | cd07084, ALDH_KGSADH-like, ALDH subfamily: NAD(P)+ | 1e-24 | |
| cd07128 | 513 | cd07128, ALDH_MaoC-N, N-terminal domain of the mon | 4e-21 | |
| TIGR02278 | 663 | TIGR02278, PaaN-DH, phenylacetic acid degradation | 2e-19 | |
| PRK11563 | 675 | PRK11563, PRK11563, bifunctional aldehyde dehydrog | 3e-16 | |
| cd07129 | 454 | cd07129, ALDH_KGSADH, Alpha-Ketoglutaric Semialdeh | 5e-14 | |
| cd07126 | 489 | cd07126, ALDH_F12_P5CDH, Delta(1)-pyrroline-5-carb | 4e-12 | |
| cd07077 | 397 | cd07077, ALDH-like, NAD(P)+-dependent aldehyde deh | 9e-11 | |
| cd07081 | 439 | cd07081, ALDH_F20_ACDH_EutE-like, Coenzyme A acyla | 4e-08 | |
| cd07121 | 429 | cd07121, ALDH_EutE, Ethanolamine utilization prote | 4e-07 | |
| cd07122 | 436 | cd07122, ALDH_F20_ACDH, Coenzyme A acylating aldeh | 5e-05 | |
| PRK15398 | 465 | PRK15398, PRK15398, aldehyde dehydrogenase EutE; P | 7e-04 | |
| TIGR02518 | 488 | TIGR02518, EutH_ACDH, acetaldehyde dehydrogenase ( | 0.001 |
| >gnl|CDD|215410 PLN02766, PLN02766, coniferyl-aldehyde dehydrogenase | Back alignment and domain information |
|---|
Score = 816 bits (2109), Expect = 0.0
Identities = 331/414 (79%), Positives = 376/414 (90%)
Query: 1 MWKFADLIEEHVEELAALDALDAGKVYLRAKTAEIPGAAEFLRFFAGAADKIHGEVLKMS 60
M KFADLIEEH+EELAALD +DAGK++ K +IP AA LR++AGAADKIHGE LKMS
Sbjct: 88 MMKFADLIEEHIEELAALDTIDAGKLFALGKAVDIPAAAGLLRYYAGAADKIHGETLKMS 147
Query: 61 SELQGYTLREPVGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLTALYYAHL 120
+LQGYTL+EP+GVVGHIIPWNFP+TMFFMKV+PALAAGCTM+VKPAEQTPL+AL+YAHL
Sbjct: 148 RQLQGYTLKEPIGVVGHIIPWNFPSTMFFMKVAPALAAGCTMVVKPAEQTPLSALFYAHL 207
Query: 121 AKLAGIPDGVLNVVPGFGPTAGAAICSHMDIDYVCFTGSTDVGRLVMQAAAASNLKQVSL 180
AKLAG+PDGV+NVV GFGPTAGAAI SHMD+D V FTGST+VGR +MQAAA SNLKQVSL
Sbjct: 208 AKLAGVPDGVINVVTGFGPTAGAAIASHMDVDKVSFTGSTEVGRKIMQAAATSNLKQVSL 267
Query: 181 ELGGKSPLLIFDDADLDTAADVALLGNLYNKGEICVASSRVFVQEGIYDKFEKKLLEKAK 240
ELGGKSPLLIFDDAD+D A D+ALLG YNKGEICVASSRV+VQEGIYD+F KKL+EKAK
Sbjct: 268 ELGGKSPLLIFDDADVDMAVDLALLGIFYNKGEICVASSRVYVQEGIYDEFVKKLVEKAK 327
Query: 241 AWLVGDPFDPTVRQGPQISERHFDRILSYIEHGKREGATLLTGGKPIGDKGYYIEPTIFT 300
W+VGDPFDP RQGPQ+ ++ F++ILSYIEHGKREGATLLTGGKP GDKGYYIEPTIFT
Sbjct: 328 DWVVGDPFDPRARQGPQVDKQQFEKILSYIEHGKREGATLLTGGKPCGDKGYYIEPTIFT 387
Query: 301 NVKEDMIIAKEEIFGPVMALMKFKTVEEAIKSANNTQYGLAAGIVTKDLNVANTVSRSIR 360
+V EDM IA++EIFGPVM+LMKFKTVEEAIK ANNT+YGLAAGIVTKDL+VANTVSRSIR
Sbjct: 388 DVTEDMKIAQDEIFGPVMSLMKFKTVEEAIKKANNTKYGLAAGIVTKDLDVANTVSRSIR 447
Query: 361 AGIIWINCYFGFSMDCPYGGYKMSGFGREYGLESLYKYLQIKSVVTPIYNSPWL 414
AG IW+NCYF F DCP+GGYKMSGFGR+ G+++L KYLQ+KSVVTP+YNSPWL
Sbjct: 448 AGTIWVNCYFAFDPDCPFGGYKMSGFGRDQGMDALDKYLQVKSVVTPLYNSPWL 501
|
Length = 501 |
| >gnl|CDD|143410 cd07091, ALDH_F1-2_Ald2-like, ALDH subfamily: ALDH families 1and 2, including 10-formyltetrahydrofolate dehydrogenase, NAD+-dependent retinal dehydrogenase 1 and related proteins | Back alignment and domain information |
|---|
Score = 649 bits (1676), Expect = 0.0
Identities = 236/405 (58%), Positives = 306/405 (75%)
Query: 1 MWKFADLIEEHVEELAALDALDAGKVYLRAKTAEIPGAAEFLRFFAGAADKIHGEVLKMS 60
+ K ADLIE +ELAAL++LD GK + ++ + + LR++AG ADKI G+ + +
Sbjct: 71 LNKLADLIERDRDELAALESLDNGKPLEESAKGDVALSIKCLRYYAGWADKIQGKTIPID 130
Query: 61 SELQGYTLREPVGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLTALYYAHL 120
YT REP+GV G IIPWNFP M K++PALAAG T+++KPAEQTPL+ALY A L
Sbjct: 131 GNFLAYTRREPIGVCGQIIPWNFPLLMLAWKLAPALAAGNTVVLKPAEQTPLSALYLAEL 190
Query: 121 AKLAGIPDGVLNVVPGFGPTAGAAICSHMDIDYVCFTGSTDVGRLVMQAAAASNLKQVSL 180
K AG P GV+N+VPGFGPTAGAAI SHMD+D + FTGST VGR +M+AAA SNLK+V+L
Sbjct: 191 IKEAGFPPGVVNIVPGFGPTAGAAISSHMDVDKIAFTGSTAVGRTIMEAAAKSNLKKVTL 250
Query: 181 ELGGKSPLLIFDDADLDTAADVALLGNLYNKGEICVASSRVFVQEGIYDKFEKKLLEKAK 240
ELGGKSP ++FDDADLD A + A G +N+G+ C A SR+FVQE IYD+F +K +A+
Sbjct: 251 ELGGKSPNIVFDDADLDKAVEWAAFGIFFNQGQCCCAGSRIFVQESIYDEFVEKFKARAE 310
Query: 241 AWLVGDPFDPTVRQGPQISERHFDRILSYIEHGKREGATLLTGGKPIGDKGYYIEPTIFT 300
+VGDPFDP QGPQ+S+ FD+ILSYIE GK+EGATLLTGG+ G KGY+I+PT+FT
Sbjct: 311 KRVVGDPFDPDTFQGPQVSKAQFDKILSYIESGKKEGATLLTGGERHGSKGYFIQPTVFT 370
Query: 301 NVKEDMIIAKEEIFGPVMALMKFKTVEEAIKSANNTQYGLAAGIVTKDLNVANTVSRSIR 360
+VK+DM IAKEEIFGPV+ ++KFKT +E I+ AN+T+YGLAAG+ TKD+N A VSR+++
Sbjct: 371 DVKDDMKIAKEEIFGPVVTILKFKTEDEVIERANDTEYGLAAGVFTKDINKALRVSRALK 430
Query: 361 AGIIWINCYFGFSMDCPYGGYKMSGFGREYGLESLYKYLQIKSVV 405
AG +W+N Y F P+GG+K SGFGRE G E L +Y Q+K+V
Sbjct: 431 AGTVWVNTYNVFDAAVPFGGFKQSGFGRELGEEGLEEYTQVKAVT 475
|
ALDH subfamily which includes the NAD+-dependent retinal dehydrogenase 1 (RALDH 1, ALDH1, EC=1.2.1.36), also known as aldehyde dehydrogenase family 1 member A1 (ALDH1A1), in humans, a homotetrameric, cytosolic enzyme that catalyzes the oxidation of retinaldehyde to retinoic acid. Human ALDH1B1 and ALDH2 are also in this cluster; both are mitochrondrial homotetramers which play important roles in acetaldehyde oxidation; ALDH1B1 in response to UV light exposure and ALDH2 during ethanol metabolism. 10-formyltetrahydrofolate dehydrogenase (FTHFDH, EC=1.5.1.6), also known as aldehyde dehydrogenase family 1 member L1 (ALDH1L1), in humans, a multi-domain homotetramer with an N-terminal formyl transferase domain and a C-terminal ALDH domain. FTHFDH catalyzes an NADP+-dependent dehydrogenase reaction resulting in the conversion of 10-formyltetrahydrofolate to tetrahydrofolate and CO2. Also included in this subfamily is the Arabidosis aldehyde dehydrogenase family 2 members B4 and B7 (EC=1.2.1.3), which are mitochondrial, homotetramers that oxidize acetaldehyde and glycolaldehyde, as well as, the Arabidosis cytosolic, homotetramer ALDH2C4 (EC=1.2.1.3), an enzyme involved in the oxidation of sinapalehyde and coniferaldehyde. Also included is the AldA aldehyde dehydrogenase of Aspergillus nidulans (locus AN0554), the aldehyde dehydrogenase 2 (YMR170c, ALD5, EC=1.2.1.5) of Saccharomyces cerevisiae, and other similar sequences. Length = 476 |
| >gnl|CDD|143460 cd07142, ALDH_F2BC, Arabidosis aldehyde dehydrogenase family 2 B4, B7, C4-like | Back alignment and domain information |
|---|
Score = 644 bits (1663), Expect = 0.0
Identities = 240/406 (59%), Positives = 310/406 (76%)
Query: 1 MWKFADLIEEHVEELAALDALDAGKVYLRAKTAEIPGAAEFLRFFAGAADKIHGEVLKMS 60
+ +FADL+E+H +ELAAL+ D GK Y +A+ AE+P AA R++AG ADKIHG L
Sbjct: 71 LLRFADLLEKHADELAALETWDNGKPYEQARYAEVPLAARLFRYYAGWADKIHGMTLPAD 130
Query: 61 SELQGYTLREPVGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLTALYYAHL 120
YTL EP+GVVG IIPWNFP MF KV PALA G T+++KPAEQTPL+AL A L
Sbjct: 131 GPHHVYTLHEPIGVVGQIIPWNFPLLMFAWKVGPALACGNTIVLKPAEQTPLSALLAAKL 190
Query: 121 AKLAGIPDGVLNVVPGFGPTAGAAICSHMDIDYVCFTGSTDVGRLVMQAAAASNLKQVSL 180
A AG+PDGVLN+V GFGPTAGAAI SHMD+D V FTGST+VG+++MQ AA SNLK V+L
Sbjct: 191 AAEAGLPDGVLNIVTGFGPTAGAAIASHMDVDKVAFTGSTEVGKIIMQLAAKSNLKPVTL 250
Query: 181 ELGGKSPLLIFDDADLDTAADVALLGNLYNKGEICVASSRVFVQEGIYDKFEKKLLEKAK 240
ELGGKSP ++ +DAD+D A ++A +N+G+ C A SR FV E IYD+F +K +A
Sbjct: 251 ELGGKSPFIVCEDADVDKAVELAHFALFFNQGQCCCAGSRTFVHESIYDEFVEKAKARAL 310
Query: 241 AWLVGDPFDPTVRQGPQISERHFDRILSYIEHGKREGATLLTGGKPIGDKGYYIEPTIFT 300
+VGDPF V QGPQ+ + F++ILSYIEHGK EGATL+TGG IG KGYYI+PTIF+
Sbjct: 311 KRVVGDPFRKGVEQGPQVDKEQFEKILSYIEHGKEEGATLITGGDRIGSKGYYIQPTIFS 370
Query: 301 NVKEDMIIAKEEIFGPVMALMKFKTVEEAIKSANNTQYGLAAGIVTKDLNVANTVSRSIR 360
+VK+DM IA++EIFGPV +++KFKTV+E IK ANN++YGLAAG+ +K+++ ANT+SR+++
Sbjct: 371 DVKDDMKIARDEIFGPVQSILKFKTVDEVIKRANNSKYGLAAGVFSKNIDTANTLSRALK 430
Query: 361 AGIIWINCYFGFSMDCPYGGYKMSGFGREYGLESLYKYLQIKSVVT 406
AG +W+NCY F P+GGYKMSG GRE G+ +L YLQ+K+VV
Sbjct: 431 AGTVWVNCYDVFDASIPFGGYKMSGIGREKGIYALNNYLQVKAVVM 476
|
Included in this CD is the Arabidosis aldehyde dehydrogenase family 2 members B4 and B7 (EC=1.2.1.3), which are mitochondrial homotetramers that oxidize acetaldehyde and glycolaldehyde, but not L-lactaldehyde. Also in this group, is the Arabidosis cytosolic, homotetramer ALDH2C4 (EC=1.2.1.3), an enzyme involved in the oxidation of sinapalehyde and coniferaldehyde. Length = 476 |
| >gnl|CDD|143459 cd07141, ALDH_F1AB_F2_RALDH1, NAD+-dependent retinal dehydrogenase 1, ALDH families 1A, 1B, and 2-like | Back alignment and domain information |
|---|
Score = 605 bits (1561), Expect = 0.0
Identities = 232/403 (57%), Positives = 292/403 (72%)
Query: 3 KFADLIEEHVEELAALDALDAGKVYLRAKTAEIPGAAEFLRFFAGAADKIHGEVLKMSSE 62
K ADLIE LA+L+ LD GK + ++ ++PGA + LR++AG ADKIHG+ + M +
Sbjct: 77 KLADLIERDRAYLASLETLDNGKPFSKSYLVDLPGAIKVLRYYAGWADKIHGKTIPMDGD 136
Query: 63 LQGYTLREPVGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLTALYYAHLAK 122
YT EPVGV G IIPWNFP M K++PALA G T+++KPAEQTPLTALY A L K
Sbjct: 137 FFTYTRHEPVGVCGQIIPWNFPLLMAAWKLAPALACGNTVVLKPAEQTPLTALYLASLIK 196
Query: 123 LAGIPDGVLNVVPGFGPTAGAAICSHMDIDYVCFTGSTDVGRLVMQAAAASNLKQVSLEL 182
AG P GV+NVVPG+GPTAGAAI SH DID V FTGST+VG+L+ QAA SNLK+V+LEL
Sbjct: 197 EAGFPPGVVNVVPGYGPTAGAAISSHPDIDKVAFTGSTEVGKLIQQAAGKSNLKRVTLEL 256
Query: 183 GGKSPLLIFDDADLDTAADVALLGNLYNKGEICVASSRVFVQEGIYDKFEKKLLEKAKAW 242
GGKSP ++F DADLD A + A +N G+ C A SR FVQE IYD+F K+ +E+AK
Sbjct: 257 GGKSPNIVFADADLDYAVEQAHEALFFNMGQCCCAGSRTFVQESIYDEFVKRSVERAKKR 316
Query: 243 LVGDPFDPTVRQGPQISERHFDRILSYIEHGKREGATLLTGGKPIGDKGYYIEPTIFTNV 302
+VG+PFDP QGPQI E F +IL IE GK+EGA L GGK GDKGY+I+PT+F++V
Sbjct: 317 VVGNPFDPKTEQGPQIDEEQFKKILELIESGKKEGAKLECGGKRHGDKGYFIQPTVFSDV 376
Query: 303 KEDMIIAKEEIFGPVMALMKFKTVEEAIKSANNTQYGLAAGIVTKDLNVANTVSRSIRAG 362
+DM IAKEEIFGPV + KFKT++E I+ ANNT YGLAA + TKD++ A T S ++RAG
Sbjct: 377 TDDMRIAKEEIFGPVQQIFKFKTIDEVIERANNTTYGLAAAVFTKDIDKAITFSNALRAG 436
Query: 363 IIWINCYFGFSMDCPYGGYKMSGFGREYGLESLYKYLQIKSVV 405
+W+NCY S P+GGYKMSG GRE G L +Y ++K+V
Sbjct: 437 TVWVNCYNVVSPQAPFGGYKMSGNGRELGEYGLQEYTEVKTVT 479
|
NAD+-dependent retinal dehydrogenase 1 (RALDH 1, ALDH1, EC=1.2.1.36) also known as aldehyde dehydrogenase family 1 member A1 (ALDH1A1) in humans, is a homotetrameric, cytosolic enzyme that catalyzes the oxidation of retinaldehyde to retinoic acid. Human ALDH1B1 and ALDH2 are also in this cluster; both are mitochrondrial homotetramers which play important roles in acetaldehyde oxidation; ALDH1B1 in response to UV light exposure and ALDH2 during ethanol metabolism. Length = 481 |
| >gnl|CDD|215767 pfam00171, Aldedh, Aldehyde dehydrogenase family | Back alignment and domain information |
|---|
Score = 569 bits (1469), Expect = 0.0
Identities = 210/403 (52%), Positives = 281/403 (69%), Gaps = 3/403 (0%)
Query: 3 KFADLIEEHVEELAALDALDAGKVYLRAKTAEIPGAAEFLRFFAGAADKIHGEVLKMSSE 62
K ADL+EE +ELA L+ L+ GK A+ E+P A + LR++AG A K+ GE L
Sbjct: 59 KAADLLEERRDELAELETLETGKPLAEAR-GEVPRAIDTLRYYAGLARKLEGETLPSDPG 117
Query: 63 LQGYTLREPVGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLTALYYAHLAK 122
+ YT REP+GVVG I PWNFP + K++PALAAG T+++KP+E TPLTAL A L +
Sbjct: 118 VLAYTRREPLGVVGAITPWNFPLLLAAWKIAPALAAGNTVVLKPSELTPLTALLLAELFE 177
Query: 123 LAGIPDGVLNVVPGFGPTAGAAICSHMDIDYVCFTGSTDVGRLVMQAAAASNLKQVSLEL 182
AG+P GVLNVV G G G A+ H D+D V FTGST+VGR + +AAA NLK+V+LEL
Sbjct: 178 EAGLPPGVLNVVTGSGSEVGDALVEHPDVDKVSFTGSTEVGRRIAKAAA-KNLKRVTLEL 236
Query: 183 GGKSPLLIFDDADLDTAADVALLGNLYNKGEICVASSRVFVQEGIYDKFEKKLLEKAKAW 242
GGK+PL++FDDADLD A + A+ G N G++C A SR+ V E IYD+F ++L+E AK+
Sbjct: 237 GGKNPLIVFDDADLDAAVEGAVFGAFGNAGQVCTAGSRLLVHESIYDEFVERLVEAAKSL 296
Query: 243 LVGDPFDPTVRQGPQISERHFDRILSYIEHGKREGATLLTGGKPIGDKGYYIEPTIFTNV 302
VGDP DP GP IS++ +R+LSYIE K EGA LL GG+ +KGY++EPT+ +V
Sbjct: 297 KVGDPLDPDTDIGPLISKKQRERVLSYIEDAKEEGAKLLCGGEAGLEKGYFVEPTVLADV 356
Query: 303 KEDMIIAKEEIFGPVMALMKFKTVEEAIKSANNTQYGLAAGIVTKDLNVANTVSRSIRAG 362
DM IA+EEIFGPV++++ FK +EAI+ AN+T+YGLAAG+ T DL A V+R + AG
Sbjct: 357 TPDMRIAQEEIFGPVLSVIPFKDEDEAIELANDTEYGLAAGVFTNDLERALRVARRLEAG 416
Query: 363 IIWINCYFGFSMD-CPYGGYKMSGFGREYGLESLYKYLQIKSV 404
++WIN Y + P+GG+K SGFGRE G E L +Y + K+V
Sbjct: 417 MVWINDYTTGDPEALPFGGFKQSGFGREGGKEGLEEYTETKTV 459
|
This family of dehydrogenases act on aldehyde substrates. Members use NADP as a cofactor. The family includes the following members: The prototypical members are the aldehyde dehydrogenases EC:1.2.1.3. Succinate-semialdehyde dehydrogenase EC:1.2.1.16. Lactaldehyde dehydrogenase EC:1.2.1.22. Benzaldehyde dehydrogenase EC:1.2.1.28. Methylmalonate-semialdehyde dehydrogenase EC:1.2.1.27. Glyceraldehyde-3-phosphate dehydrogenase EC:1.2.1.9. Delta-1-pyrroline-5-carboxylate dehydrogenase EC: 1.5.1.12. Acetaldehyde dehydrogenase EC:1.2.1.10. Glutamate-5-semialdehyde dehydrogenase EC:1.2.1.41. This family also includes omega crystallin, an eye lens protein from squid and octopus that has little aldehyde dehydrogenase activity. Length = 459 |
| >gnl|CDD|215259 PLN02466, PLN02466, aldehyde dehydrogenase family 2 member | Back alignment and domain information |
|---|
Score = 554 bits (1429), Expect = 0.0
Identities = 230/418 (55%), Positives = 302/418 (72%), Gaps = 8/418 (1%)
Query: 1 MWKFADLIEEHVEELAALDALDAGKVYLRAKTAEIPGAAEFLRFFAGAADKIHGEVLKMS 60
+ +FADL+E+H +ELAAL+ D GK Y ++ AE+P A R++AG ADKIHG +
Sbjct: 125 LLRFADLLEKHNDELAALETWDNGKPYEQSAKAELPMFARLFRYYAGWADKIHGLTVPAD 184
Query: 61 SELQGYTLREPVGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLTALYYAHL 120
TL EP+GV G IIPWNFP MF KV PALA G T+++K AEQTPL+ALY A L
Sbjct: 185 GPHHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYAAKL 244
Query: 121 AKLAGIPDGVLNVVPGFGPTAGAAICSHMDIDYVCFTGSTDVGRLVMQAAAASNLKQVSL 180
AG+P GVLNVV GFGPTAGAA+ SHMD+D + FTGSTD G++V++ AA SNLK V+L
Sbjct: 245 LHEAGLPPGVLNVVSGFGPTAGAALASHMDVDKLAFTGSTDTGKIVLELAAKSNLKPVTL 304
Query: 181 ELGGKSPLLIFDDADLDTAADVALLGNLYNKGEICVASSRVFVQEGIYDKFEKKLLEKAK 240
ELGGKSP ++ +DAD+D A ++A +N+G+ C A SR FV E +YD+F +EKAK
Sbjct: 305 ELGGKSPFIVCEDADVDKAVELAHFALFFNQGQCCCAGSRTFVHERVYDEF----VEKAK 360
Query: 241 A----WLVGDPFDPTVRQGPQISERHFDRILSYIEHGKREGATLLTGGKPIGDKGYYIEP 296
A +VGDPF V QGPQI F++IL YI+ G GATL GG G KGYYI+P
Sbjct: 361 ARALKRVVGDPFKKGVEQGPQIDSEQFEKILRYIKSGVESGATLECGGDRFGSKGYYIQP 420
Query: 297 TIFTNVKEDMIIAKEEIFGPVMALMKFKTVEEAIKSANNTQYGLAAGIVTKDLNVANTVS 356
T+F+NV++DM+IA++EIFGPV +++KFK ++E I+ ANNT+YGLAAG+ T++L+ ANT+S
Sbjct: 421 TVFSNVQDDMLIAQDEIFGPVQSILKFKDLDEVIRRANNTRYGLAAGVFTQNLDTANTLS 480
Query: 357 RSIRAGIIWINCYFGFSMDCPYGGYKMSGFGREYGLESLYKYLQIKSVVTPIYNSPWL 414
R++R G +W+NC+ F P+GGYKMSG GRE G+ SL YLQ+K+VVTP+ N WL
Sbjct: 481 RALRVGTVWVNCFDVFDAAIPFGGYKMSGIGREKGIYSLNNYLQVKAVVTPLKNPAWL 538
|
Length = 538 |
| >gnl|CDD|143430 cd07112, ALDH_GABALDH-PuuC, Escherichia coli NADP+-dependent gamma-glutamyl-gamma-aminobutyraldehyde dehydrogenase PuuC-like | Back alignment and domain information |
|---|
Score = 549 bits (1417), Expect = 0.0
Identities = 203/407 (49%), Positives = 278/407 (68%), Gaps = 3/407 (0%)
Query: 1 MWKFADLIEEHVEELAALDALDAGKVYLRAKTAEIPGAAEFLRFFAGAADKIHGEVLKMS 60
+ + ADLIE H +ELA L+ LD GK A ++P AA R++A A DK++GEV
Sbjct: 54 LLRLADLIEAHRDELALLETLDMGKPISDALAVDVPSAANTFRWYAEAIDKVYGEVAPTG 113
Query: 61 SELQGYTLREPVGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLTALYYAHL 120
+ REP+GVVG ++PWNFP M K++PALAAG ++++KPAEQ+PLTAL A L
Sbjct: 114 PDALALITREPLGVVGAVVPWNFPLLMAAWKIAPALAAGNSVVLKPAEQSPLTALRLAEL 173
Query: 121 AKLAGIPDGVLNVVPGFGPTAGAAICSHMDIDYVCFTGSTDVGRLVMQAAAASNLKQVSL 180
A AG+P GVLNVVPGFG TAG A+ HMD+D + FTGST+VGR ++ + SNLK+V L
Sbjct: 174 ALEAGLPAGVLNVVPGFGHTAGEALGLHMDVDALAFTGSTEVGRRFLEYSGQSNLKRVWL 233
Query: 181 ELGGKSPLLIFDDA-DLDTAADVALLGNLYNKGEICVASSRVFVQEGIYDKFEKKLLEKA 239
E GGKSP ++F DA DLD AA+ A G +N+GE+C A SR+ V E I D+F +K++ A
Sbjct: 234 ECGGKSPNIVFADAPDLDAAAEAAAAGIFWNQGEVCSAGSRLLVHESIKDEFLEKVVAAA 293
Query: 240 KAWLVGDPFDPTVRQGPQISERHFDRILSYIEHGKREGATLLTGGKP--IGDKGYYIEPT 297
+ W GDP DP R G +SE HFD++L YIE GK EGA L+ GGK G+++EPT
Sbjct: 294 REWKPGDPLDPATRMGALVSEAHFDKVLGYIESGKAEGARLVAGGKRVLTETGGFFVEPT 353
Query: 298 IFTNVKEDMIIAKEEIFGPVMALMKFKTVEEAIKSANNTQYGLAAGIVTKDLNVANTVSR 357
+F V DM IA+EEIFGPV++++ F + EEA+ AN++ YGLAA + T DL+ A+ V+R
Sbjct: 354 VFDGVTPDMRIAREEIFGPVLSVITFDSEEEAVALANDSVYGLAASVWTSDLSRAHRVAR 413
Query: 358 SIRAGIIWINCYFGFSMDCPYGGYKMSGFGREYGLESLYKYLQIKSV 404
+RAG +W+NC+ + P+GG+K SG GR+ L +L KY ++K+
Sbjct: 414 RLRAGTVWVNCFDEGDITTPFGGFKQSGNGRDKSLHALDKYTELKTT 460
|
NADP+-dependent, gamma-glutamyl-gamma-aminobutyraldehyde dehydrogenase (GABALDH) PuuC of Escherichia coli which catalyzes the conversion of putrescine to 4-aminobutanoate and other similar sequences are present in this CD. Length = 462 |
| >gnl|CDD|143397 cd07078, ALDH, NAD(P)+ dependent aldehyde dehydrogenase family | Back alignment and domain information |
|---|
Score = 542 bits (1398), Expect = 0.0
Identities = 210/407 (51%), Positives = 273/407 (67%), Gaps = 5/407 (1%)
Query: 3 KFADLIEEHVEELAALDALDAGKVYLRAKTAEIPGAAEFLRFFAGAADKIHGEVLK-MSS 61
K ADL+EE EELAAL+ L+ GK A E+ AA+ R++AG A ++HGEV+
Sbjct: 28 KLADLLEERREELAALETLETGKPIEEAL-GEVARAADTFRYYAGLARRLHGEVIPSPDP 86
Query: 62 ELQGYTLREPVGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLTALYYAHLA 121
REP+GVVG I PWNFP + K++PALAAG T+++KP+E TPLTAL A L
Sbjct: 87 GELAIVRREPLGVVGAITPWNFPLLLAAWKLAPALAAGNTVVLKPSELTPLTALLLAELL 146
Query: 122 KLAGIPDGVLNVVPGFGPTAGAAICSHMDIDYVCFTGSTDVGRLVMQAAAASNLKQVSLE 181
AG+P GVLNVV G G GAA+ SH +D + FTGST VG+ +M+AAA NLK+V+LE
Sbjct: 147 AEAGLPPGVLNVVTGDGDEVGAALASHPRVDKISFTGSTAVGKAIMRAAAE-NLKRVTLE 205
Query: 182 LGGKSPLLIFDDADLDTAADVALLGNLYNKGEICVASSRVFVQEGIYDKFEKKLLEKAKA 241
LGGKSPL++FDDADLD A A+ G N G++C A+SR+ V E IYD+F ++L+E+ KA
Sbjct: 206 LGGKSPLIVFDDADLDAAVKGAVFGAFGNAGQVCTAASRLLVHESIYDEFVERLVERVKA 265
Query: 242 WLVGDPFDPTVRQGPQISERHFDRILSYIEHGKREGATLLTGGKPI-GDKGYYIEPTIFT 300
VG+P DP GP IS DR+L+YIE K EGA LL GGK + G KGY++ PT+ T
Sbjct: 266 LKVGNPLDPDTDMGPLISAAQLDRVLAYIEDAKAEGAKLLCGGKRLEGGKGYFVPPTVLT 325
Query: 301 NVKEDMIIAKEEIFGPVMALMKFKTVEEAIKSANNTQYGLAAGIVTKDLNVANTVSRSIR 360
+V DM IA+EEIFGPV+ ++ FK EEAI+ AN+T+YGLAAG+ T+DL A V+ +
Sbjct: 326 DVDPDMPIAQEEIFGPVLPVIPFKDEEEAIELANDTEYGLAAGVFTRDLERALRVAERLE 385
Query: 361 AGIIWINCY-FGFSMDCPYGGYKMSGFGREYGLESLYKYLQIKSVVT 406
AG +WIN Y G P+GG K SG GRE G L +Y + K+V
Sbjct: 386 AGTVWINDYSVGAEPSAPFGGVKQSGIGREGGPYGLEEYTEPKTVTI 432
|
The aldehyde dehydrogenase family (ALDH) of NAD(P)+ dependent enzymes, in general, oxidize a wide range of endogenous and exogenous aliphatic and aromatic aldehydes to their corresponding carboxylic acids and play an important role in detoxification. Besides aldehyde detoxification, many ALDH isozymes possess multiple additional catalytic and non-catalytic functions such as participating in metabolic pathways, or as binding proteins, or as osmoregulants, to mention a few. The enzyme has three domains, a NAD(P)+ cofactor-binding domain, a catalytic domain, and a bridging domain; and the active enzyme is generally either homodimeric or homotetrameric. The catalytic mechanism is proposed to involve cofactor binding, resulting in a conformational change and activation of an invariant catalytic cysteine nucleophile. The cysteine and aldehyde substrate form an oxyanion thiohemiacetal intermediate resulting in hydride transfer to the cofactor and formation of a thioacylenzyme intermediate. Hydrolysis of the thioacylenzyme and release of the carboxylic acid product occurs, and in most cases, the reduced cofactor dissociates from the enzyme. The evolutionary phylogenetic tree of ALDHs appears to have an initial bifurcation between what has been characterized as the classical aldehyde dehydrogenases, the ALDH family (ALDH) and extended family members or aldehyde dehydrogenase-like (ALDH-like) proteins. The ALDH proteins are represented by enzymes which share a number of highly conserved residues necessary for catalysis and cofactor binding and they include such proteins as retinal dehydrogenase, 10-formyltetrahydrofolate dehydrogenase, non-phosphorylating glyceraldehyde 3-phosphate dehydrogenase, delta(1)-pyrroline-5-carboxylate dehydrogenases, alpha-ketoglutaric semialdehyde dehydrogenase, alpha-aminoadipic semialdehyde dehydrogenase, coniferyl aldehyde dehydrogenase and succinate-semialdehyde dehydrogenase. Included in this larger group are all human, Arabidopsis, Tortula, fungal, protozoan, and Drosophila ALDHs identified in families ALDH1 through ALDH22 with the exception of families ALDH18, ALDH19, and ALDH20 which are present in the ALDH-like group. Length = 432 |
| >gnl|CDD|143461 cd07143, ALDH_AldA_AN0554, Aspergillus nidulans aldehyde dehydrogenase, AldA (AN0554)-like | Back alignment and domain information |
|---|
Score = 524 bits (1352), Expect = 0.0
Identities = 225/404 (55%), Positives = 294/404 (72%)
Query: 1 MWKFADLIEEHVEELAALDALDAGKVYLRAKTAEIPGAAEFLRFFAGAADKIHGEVLKMS 60
+ K ADL+E +++ LA+++ALD GK + AK ++ +A+ R++ G ADKIHG+V++
Sbjct: 74 LSKLADLMERNLDYLASIEALDNGKTFGTAKRVDVQASADTFRYYGGWADKIHGQVIETD 133
Query: 61 SELQGYTLREPVGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLTALYYAHL 120
+ YT EP+GV G IIPWNFP M K++PALAAG T+++KP+E TPL+ALY L
Sbjct: 134 IKKLTYTRHEPIGVCGQIIPWNFPLLMCAWKIAPALAAGNTIVLKPSELTPLSALYMTKL 193
Query: 121 AKLAGIPDGVLNVVPGFGPTAGAAICSHMDIDYVCFTGSTDVGRLVMQAAAASNLKQVSL 180
AG P GV+NVV G+G T G AI SHMDID V FTGST VGR VM+AAA SNLK+V+L
Sbjct: 194 IPEAGFPPGVINVVSGYGRTCGNAISSHMDIDKVAFTGSTLVGRKVMEAAAKSNLKKVTL 253
Query: 181 ELGGKSPLLIFDDADLDTAADVALLGNLYNKGEICVASSRVFVQEGIYDKFEKKLLEKAK 240
ELGGKSP ++FDDADL++A G +N G++C A SR++VQEGIYDKF K+ EKAK
Sbjct: 254 ELGGKSPNIVFDDADLESAVVWTAYGIFFNHGQVCCAGSRIYVQEGIYDKFVKRFKEKAK 313
Query: 241 AWLVGDPFDPTVRQGPQISERHFDRILSYIEHGKREGATLLTGGKPIGDKGYYIEPTIFT 300
VGDPF QGPQ+S+ ++RI+SYIE GK EGAT+ TGGK G++GY+IEPTIFT
Sbjct: 314 KLKVGDPFAEDTFQGPQVSQIQYERIMSYIESGKAEGATVETGGKRHGNEGYFIEPTIFT 373
Query: 301 NVKEDMIIAKEEIFGPVMALMKFKTVEEAIKSANNTQYGLAAGIVTKDLNVANTVSRSIR 360
+V EDM I KEEIFGPV+A++KFKT EEAIK AN++ YGLAA + T ++N A V+ +++
Sbjct: 374 DVTEDMKIVKEEIFGPVVAVIKFKTEEEAIKRANDSTYGLAAAVFTNNINNAIRVANALK 433
Query: 361 AGIIWINCYFGFSMDCPYGGYKMSGFGREYGLESLYKYLQIKSV 404
AG +W+NCY P+GGYK SG GRE G +L Y QIK+V
Sbjct: 434 AGTVWVNCYNLLHHQVPFGGYKQSGIGRELGEYALENYTQIKAV 477
|
NAD(P)+-dependent aldehyde dehydrogenase (AldA) of Aspergillus nidulans (locus AN0554), and other similar sequences, are present in this CD. Length = 481 |
| >gnl|CDD|143462 cd07144, ALDH_ALD2-YMR170C, Saccharomyces cerevisiae aldehyde dehydrogenase 2 (YMR170c)-like | Back alignment and domain information |
|---|
Score = 514 bits (1326), Expect = 0.0
Identities = 214/408 (52%), Positives = 281/408 (68%), Gaps = 5/408 (1%)
Query: 1 MWKFADLIEEHVEELAALDALDAGKVYLRAKTAEIPGAAEFLRFFAGAADKIHGEVLKMS 60
+ K ADL+E++ + LAA++ALD+GK Y ++ +R++AG ADKI G+ + S
Sbjct: 74 LDKLADLVEKNRDLLAAIEALDSGKPYHSNALGDLDEIIAVIRYYAGWADKIQGKTIPTS 133
Query: 61 SELQGYTLREPVGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLTALYYAHL 120
YTL EP GV G IIPWN+P M K++PALAAG T+++KPAE TPL+ LY+A+L
Sbjct: 134 PNKLAYTLHEPYGVCGQIIPWNYPLAMAAWKLAPALAAGNTVVIKPAENTPLSLLYFANL 193
Query: 121 AKLAGIPDGVLNVVPGFGPTAGAAICSHMDIDYVCFTGSTDVGRLVMQAAAASNLKQVSL 180
K AG P GV+N++PG+G AG+A+ H D+D + FTGST GRLVM+ AAA NLK V+L
Sbjct: 194 VKEAGFPPGVVNIIPGYGAVAGSALAEHPDVDKIAFTGSTATGRLVMK-AAAQNLKAVTL 252
Query: 181 ELGGKSPLLIFDDADLDTAADVALLGNLYNKGEICVASSRVFVQEGIYDKFEKKLLEKAK 240
E GGKSP L+F+DADLD A A G +YN G+ C A+SR++VQE IYDKF +K +E K
Sbjct: 253 ECGGKSPALVFEDADLDQAVKWAAAGIMYNSGQNCTATSRIYVQESIYDKFVEKFVEHVK 312
Query: 241 -AWLVGDPFDPTVRQGPQISERHFDRILSYIEHGKREGATLLTGG---KPIGDKGYYIEP 296
+ VG PFD GPQ+S+ +DR+LSYIE GK+EGA L+ GG KGY+I P
Sbjct: 313 QNYKVGSPFDDDTVVGPQVSKTQYDRVLSYIEKGKKEGAKLVYGGEKAPEGLGKGYFIPP 372
Query: 297 TIFTNVKEDMIIAKEEIFGPVMALMKFKTVEEAIKSANNTQYGLAAGIVTKDLNVANTVS 356
TIFT+V +DM I KEEIFGPV+ + KFKT EEAIK AN+T YGLAA + TKD+ A+ V+
Sbjct: 373 TIFTDVPQDMRIVKEEIFGPVVVISKFKTYEEAIKKANDTTYGLAAAVFTKDIRRAHRVA 432
Query: 357 RSIRAGIIWINCYFGFSMDCPYGGYKMSGFGREYGLESLYKYLQIKSV 404
R + AG++WIN + P+GG+KMSG GRE G L Y Q K+V
Sbjct: 433 RELEAGMVWINSSNDSDVGVPFGGFKMSGIGRELGEYGLETYTQTKAV 480
|
NAD(P)+-dependent Saccharomyces cerevisiae aldehyde dehydrogenase 2 (YMR170c, ALD5, EC=1.2.1.5) and other similar sequences, are present in this CD. Length = 484 |
| >gnl|CDD|143432 cd07114, ALDH_DhaS, Uncharacterized Candidatus pelagibacter aldehyde dehydrogenase, DhaS-like | Back alignment and domain information |
|---|
Score = 512 bits (1321), Expect = 0.0
Identities = 192/410 (46%), Positives = 268/410 (65%), Gaps = 7/410 (1%)
Query: 1 MWKFADLIEEHVEELAALDALDAGKVYLRAKTAEIPGAAEFLRFFAGAADKIHGEVLKMS 60
+ + ADLIE + EELA L+ D GK+ +R A++ AE+ R++AG ADKI G V+ +
Sbjct: 49 LRRLADLIEANAEELAELETRDNGKL-IRETRAQVRYLAEWYRYYAGLADKIEGAVIPVD 107
Query: 61 S-ELQGYTLREPVGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLTALYYAH 119
+ +T REP+GVV I PWN P + K++PALAAG T+++KP+E TP + L A
Sbjct: 108 KGDYLNFTRREPLGVVAAITPWNSPLLLLAKKLAPALAAGNTVVLKPSEHTPASTLELAK 167
Query: 120 LAKLAGIPDGVLNVVPGFGPTAGAAICSHMDIDYVCFTGSTDVGRLVMQAAAASNLKQVS 179
LA+ AG P GV+NVV GFGP G A+ H + + FTG T+ GR + AAA NL V+
Sbjct: 168 LAEEAGFPPGVVNVVTGFGPETGEALVEHPLVAKIAFTGGTETGRHIA-RAAAENLAPVT 226
Query: 180 LELGGKSPLLIFDDADLDTAADVALLGNLYNKGEICVASSRVFVQEGIYDKFEKKLLEKA 239
LELGGKSP ++FDDADLD A + + G G+ CVA SR+ VQ IYD+F ++L+ +A
Sbjct: 227 LELGGKSPNIVFDDADLDAAVNGVVAGIFAAAGQTCVAGSRLLVQRSIYDEFVERLVARA 286
Query: 240 KAWLVGDPFDPTVRQGPQISERHFDRILSYIEHGKREGATLLTGGKPIG----DKGYYIE 295
+A VGDP DP + GP +ER +++ Y+ + EGA +LTGG+ GY+ E
Sbjct: 287 RAIRVGDPLDPETQMGPLATERQLEKVERYVARAREEGARVLTGGERPSGADLGAGYFFE 346
Query: 296 PTIFTNVKEDMIIAKEEIFGPVMALMKFKTVEEAIKSANNTQYGLAAGIVTKDLNVANTV 355
PTI +V DM IA+EE+FGPV++++ F EEAI AN+++YGLAAGI T+DL A+ V
Sbjct: 347 PTILADVTNDMRIAQEEVFGPVLSVIPFDDEEEAIALANDSEYGLAAGIWTRDLARAHRV 406
Query: 356 SRSIRAGIIWINCYFGFSMDCPYGGYKMSGFGREYGLESLYKYLQIKSVV 405
+R+I AG +W+N Y S P+GG+K SG GRE G+E++ +Y Q KSV
Sbjct: 407 ARAIEAGTVWVNTYRALSPSSPFGGFKDSGIGRENGIEAIREYTQTKSVW 456
|
Uncharacterized aldehyde dehydrogenase from Candidatus pelagibacter (DhaS) and other related sequences are present in this CD. Length = 457 |
| >gnl|CDD|143433 cd07115, ALDH_HMSADH_HapE, Pseudomonas fluorescens 4-hydroxymuconic semialdehyde dehydrogenase-like | Back alignment and domain information |
|---|
Score = 512 bits (1320), Expect = 0.0
Identities = 213/404 (52%), Positives = 285/404 (70%), Gaps = 1/404 (0%)
Query: 1 MWKFADLIEEHVEELAALDALDAGKVYLRAKTAEIPGAAEFLRFFAGAADKIHGEVLKMS 60
+W+ A+LI + +ELA L++LD GK A+ ++P AA+ R++AG ADKI GEV+ +
Sbjct: 47 LWRLAELILANADELARLESLDTGKPIRAARRLDVPRAADTFRYYAGWADKIEGEVIPVR 106
Query: 61 SELQGYTLREPVGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLTALYYAHL 120
YT+REPVGVVG I+PWNFP KV+PALAAG T+++KPAE TPL+AL A L
Sbjct: 107 GPFLNYTVREPVGVVGAIVPWNFPLMFAAWKVAPALAAGNTVVLKPAELTPLSALRIAEL 166
Query: 121 AKLAGIPDGVLNVVPGFGPTAGAAICSHMDIDYVCFTGSTDVGRLVMQAAAASNLKQVSL 180
AG P GVLNVV GFG AGAA+ H D+D + FTGST VGR +MQ AA NLK+VSL
Sbjct: 167 MAEAGFPAGVLNVVTGFGEVAGAALVEHPDVDKITFTGSTAVGRKIMQGAAG-NLKRVSL 225
Query: 181 ELGGKSPLLIFDDADLDTAADVALLGNLYNKGEICVASSRVFVQEGIYDKFEKKLLEKAK 240
ELGGKS ++F DADLD A A G YN+G++C A SR+ V E IYD+F ++ A+
Sbjct: 226 ELGGKSANIVFADADLDAAVRAAATGIFYNQGQMCTAGSRLLVHESIYDEFLERFTSLAR 285
Query: 241 AWLVGDPFDPTVRQGPQISERHFDRILSYIEHGKREGATLLTGGKPIGDKGYYIEPTIFT 300
+ GDP DP + GP +S+ FDR+L Y++ G+ EGA LLTGGK G +G+++EPTIF
Sbjct: 286 SLRPGDPLDPKTQMGPLVSQAQFDRVLDYVDVGREEGARLLTGGKRPGARGFFVEPTIFA 345
Query: 301 NVKEDMIIAKEEIFGPVMALMKFKTVEEAIKSANNTQYGLAAGIVTKDLNVANTVSRSIR 360
V +M IA+EEIFGPV+++M+F+ EEA++ AN T+YGLAAG+ T+DL A+ V+ +++
Sbjct: 346 AVPPEMRIAQEEIFGPVVSVMRFRDEEEALRIANGTEYGLAAGVWTRDLGRAHRVAAALK 405
Query: 361 AGIIWINCYFGFSMDCPYGGYKMSGFGREYGLESLYKYLQIKSV 404
AG +WIN Y F P+GGYK SGFGRE G E+L +Y ++KSV
Sbjct: 406 AGTVWINTYNRFDPGSPFGGYKQSGFGREMGREALDEYTEVKSV 449
|
4-hydroxymuconic semialdehyde dehydrogenase (HapE, EC=1.2.1.61) of Pseudomonas fluorescens ACB involved in 4-hydroxyacetophenone degradation, and putative hydroxycaproate semialdehyde dehydrogenase (ChnE) of Brachymonas petroleovorans involved in cyclohexane metabolism, and other similar sequences, are present in this CD. Length = 453 |
| >gnl|CDD|223944 COG1012, PutA, NAD-dependent aldehyde dehydrogenases [Energy production and conversion] | Back alignment and domain information |
|---|
Score = 506 bits (1306), Expect = e-179
Identities = 202/406 (49%), Positives = 271/406 (66%), Gaps = 6/406 (1%)
Query: 1 MWKFADLIEEHVEELAALDALDAGKVYLRAKTAEIPGAAEFLRFFAGAADKIHGEVLKMS 60
+ + ADL+E EELAAL L+ GK A+ EI AA+F+R++A A ++ GE +
Sbjct: 64 LRRIADLLEARAEELAALITLETGKPISEAR-GEIARAADFIRYYAEEARRLEGETIPTD 122
Query: 61 SELQGYTLREPVGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLTALYYAHL 120
+ REP+GVVG I PWNFP + K++PALAAG T+++KP+EQTPL+AL A L
Sbjct: 123 KGSKALVRREPLGVVGAITPWNFPLALAAWKLAPALAAGNTVVLKPSEQTPLSALALAEL 182
Query: 121 AKLAGIPDGVLNVVPGFGPTAGAAICSHMDIDYVCFTGSTDVGRLVMQAAAASNLKQVSL 180
A AG+P GVLNVV G G G A+ +H D+D + FTGST VGR + AAAA+NLK V+L
Sbjct: 183 AAEAGLPAGVLNVVTGGGAEVGDALVAHPDVDAISFTGSTAVGRAIA-AAAAANLKPVTL 241
Query: 181 ELGGKSPLLIFDDADLDTAADVALLGNLYNKGEICVASSRVFVQEGIYDKFEKKLLEKAK 240
ELGGKSP ++ +DADLD A D A+ G +N G+ C A+SR+ V E +YD+F ++L+ +A
Sbjct: 242 ELGGKSPAIVLEDADLDAAVDAAVFGAFFNAGQRCTAASRLIVHESVYDEFVERLVARAA 301
Query: 241 AWLVGDPFDPTVRQGPQISERHFDRILSYIEHGKREGATLLTGGKPIGDKGYYIEPTIFT 300
+ VGDP DP+ GP ISE DR+ YIE EGA LL GGK G GY++EPTI
Sbjct: 302 SLKVGDPLDPSTDLGPLISEEQLDRVEGYIEDAVAEGARLLAGGKRPG--GYFVEPTILE 359
Query: 301 NVKEDMIIAKEEIFGPVMALMKFKTVEEAIKSANNTQYGLAAGIVTKDLNVANTVSRSIR 360
V DM IA+EEIFGPV+ +++FK EEAI+ AN+T+YGLAA I T+DL A V+R +
Sbjct: 360 GVTPDMRIAREEIFGPVLPVIRFKDEEEAIELANDTEYGLAAAIFTRDLARAFRVARRLE 419
Query: 361 AGIIWINCYFGFSMD--CPYGGYKMSGFGREYGLESLYKYLQIKSV 404
AG++ IN Y G + P+GG K SG GRE G L ++ ++K+V
Sbjct: 420 AGMVGINDYTGGADIAYLPFGGVKQSGLGREGGKYGLEEFTEVKTV 465
|
Length = 472 |
| >gnl|CDD|143412 cd07093, ALDH_F8_HMSADH, Human aldehyde dehydrogenase family 8 member A1-like | Back alignment and domain information |
|---|
Score = 502 bits (1296), Expect = e-177
Identities = 200/406 (49%), Positives = 268/406 (66%), Gaps = 5/406 (1%)
Query: 3 KFADLIEEHVEELAALDALDAGKVYLRAKTAEIPGAAEFLRFFAGAADKIHGEVLKMSSE 62
K ADLIE +ELA L++LD GK A+T +IP AA RFFA ++ GE
Sbjct: 49 KVADLIEARADELALLESLDTGKPITLARTRDIPRAAANFRFFADYILQLDGESYPQDGG 108
Query: 63 LQGYTLREPVGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLTALYYAHLAK 122
Y LR+PVGV G I PWN P + K++PALA G T+++KP+E TPLTA A LA
Sbjct: 109 ALNYVLRQPVGVAGLITPWNLPLMLLTWKIAPALAFGNTVVLKPSEWTPLTAWLLAELAN 168
Query: 123 LAGIPDGVLNVVPGFGPTAGAAICSHMDIDYVCFTGSTDVGRLVMQAAAASNLKQVSLEL 182
AG+P GV+NVV GFGP AGAA+ +H D+D + FTG T GR +M+AAA NLK VSLEL
Sbjct: 169 EAGLPPGVVNVVHGFGPEAGAALVAHPDVDLISFTGETATGRTIMRAAAP-NLKPVSLEL 227
Query: 183 GGKSPLLIFDDADLDTAADVALLGNLYNKGEICVASSRVFVQEGIYDKFEKKLLEKAKAW 242
GGK+P ++F DADLD A D A+ + N GE+C+A SR+ VQ IYD+F ++ +E+AKA
Sbjct: 228 GGKNPNIVFADADLDRAVDAAVRSSFSNNGEVCLAGSRILVQRSIYDEFLERFVERAKAL 287
Query: 243 LVGDPFDPTVRQGPQISERHFDRILSYIEHGKREGATLLTGGKPIG----DKGYYIEPTI 298
VGDP DP GP IS+ H +++L Y+E + EGAT+LTGG + GY++EPT+
Sbjct: 288 KVGDPLDPDTEVGPLISKEHLEKVLGYVELARAEGATILTGGGRPELPDLEGGYFVEPTV 347
Query: 299 FTNVKEDMIIAKEEIFGPVMALMKFKTVEEAIKSANNTQYGLAAGIVTKDLNVANTVSRS 358
T + D +A+EEIFGPV+ ++ F EEAI+ AN+T YGLAA + T+DL A+ V+R
Sbjct: 348 ITGLDNDSRVAQEEIFGPVVTVIPFDDEEEAIELANDTPYGLAAYVWTRDLGRAHRVARR 407
Query: 359 IRAGIIWINCYFGFSMDCPYGGYKMSGFGREYGLESLYKYLQIKSV 404
+ AG +W+NC+ + P+GG K SG GRE G SL Y ++K+V
Sbjct: 408 LEAGTVWVNCWLVRDLRTPFGGVKASGIGREGGDYSLEFYTELKNV 453
|
In humans, the aldehyde dehydrogenase family 8 member A1 (ALDH8A1) protein functions to convert 9-cis-retinal to 9-cis-retinoic acid and has a preference for NAD+. Also included in this CD is the 2-hydroxymuconic semialdehyde dehydrogenase (HMSADH) which catalyzes the conversion of 2-hydroxymuconic semialdehyde to 4-oxalocrotonate, a step in the meta cleavage pathway of aromatic hydrocarbons in bacteria. Such HMSADHs seen here are: XylG of the TOL plasmid pWW0 of Pseudomonas putida, TomC of Burkholderia cepacia G4, and AphC of Comamonas testosterone. Length = 455 |
| >gnl|CDD|183918 PRK13252, PRK13252, betaine aldehyde dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 480 bits (1237), Expect = e-168
Identities = 195/406 (48%), Positives = 257/406 (63%), Gaps = 6/406 (1%)
Query: 3 KFADLIEEHVEELAALDALDAGKVYLRAKTAEIPGAAEFLRFFAGAADKIHGEVLKMSSE 62
+ D++ E +ELAAL+ LD GK +I A+ L ++AG A + GE + +
Sbjct: 74 RAVDILRERNDELAALETLDTGKPIQETSVVDIVTGADVLEYYAGLAPALEGEQIPLRGG 133
Query: 63 LQGYTLREPVGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLTALYYAHLAK 122
YT REP+GV I WN+P + K +PALAAG MI KP+E TPLTAL A +
Sbjct: 134 SFVYTRREPLGVCAGIGAWNYPIQIACWKSAPALAAGNAMIFKPSEVTPLTALKLAEIYT 193
Query: 123 LAGIPDGVLNVVPGFGPTAGAAICSHMDIDYVCFTGSTDVGRLVMQAAAASNLKQVSLEL 182
AG+PDGV NVV G G GA + H DI V FTG G+ VM AAAAS LK+V++EL
Sbjct: 194 EAGLPDGVFNVVQGDGRV-GAWLTEHPDIAKVSFTGGVPTGKKVMAAAAAS-LKEVTMEL 251
Query: 183 GGKSPLLIFDDADLDTAADVALLGNLYNKGEICVASSRVFVQEGIYDKFEKKLLEKAKAW 242
GGKSPL++FDDADLD AAD+A+L N Y+ G++C +RVFVQ+ I FE +LLE+ +
Sbjct: 252 GGKSPLIVFDDADLDRAADIAMLANFYSSGQVCTNGTRVFVQKSIKAAFEARLLERVERI 311
Query: 243 LVGDPFDPTVRQGPQISERHFDRILSYIEHGKREGATLLTGGKPI----GDKGYYIEPTI 298
+GDP DP GP +S H D++L YIE GK EGA LL GG+ + G ++ PT+
Sbjct: 312 RIGDPMDPATNFGPLVSFAHRDKVLGYIEKGKAEGARLLCGGERLTEGGFANGAFVAPTV 371
Query: 299 FTNVKEDMIIAKEEIFGPVMALMKFKTVEEAIKSANNTQYGLAAGIVTKDLNVANTVSRS 358
FT+ +DM I +EEIFGPVM+++ F +E I AN+T+YGLAAG+ T DL+ A+ V
Sbjct: 372 FTDCTDDMTIVREEIFGPVMSVLTFDDEDEVIARANDTEYGLAAGVFTADLSRAHRVIHQ 431
Query: 359 IRAGIIWINCYFGFSMDCPYGGYKMSGFGREYGLESLYKYLQIKSV 404
+ AGI WIN + + P GGYK SG GRE G+ +L Y QIKSV
Sbjct: 432 LEAGICWINTWGESPAEMPVGGYKQSGIGRENGIATLEHYTQIKSV 477
|
Length = 488 |
| >gnl|CDD|143437 cd07119, ALDH_BADH-GbsA, Bacillus subtilis NAD+-dependent betaine aldehyde dehydrogenase-like | Back alignment and domain information |
|---|
Score = 477 bits (1230), Expect = e-167
Identities = 195/406 (48%), Positives = 262/406 (64%), Gaps = 6/406 (1%)
Query: 3 KFADLIEEHVEELAALDALDAGKVYLRAKTAEIPGAAEFLRFFAGAADKIHGEVLKMSSE 62
+ AD I E EELA L+ L+ GK LR +I A R++AG A K GEV +
Sbjct: 67 RIADKIREDAEELARLETLNTGKT-LRESEIDIDDVANCFRYYAGLATKETGEVYDVPPH 125
Query: 63 LQGYTLREPVGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLTALYYAHLAK 122
+ T+REPVGV G I PWN+P K++PALAAG T+++KP+E TPLT + L +
Sbjct: 126 VISRTVREPVGVCGLITPWNYPLLQAAWKLAPALAAGNTVVIKPSEVTPLTTIALFELIE 185
Query: 123 LAGIPDGVLNVVPGFGPTAGAAICSHMDIDYVCFTGSTDVGRLVMQAAAASNLKQVSLEL 182
AG+P GV+N+V G G T GA + D+D V FTG T GR +M+AAA N+K+V+LEL
Sbjct: 186 EAGLPAGVVNLVTGSGATVGAELAESPDVDLVSFTGGTATGRSIMRAAAG-NVKKVALEL 244
Query: 183 GGKSPLLIFDDADLDTAADVALLGNLYNKGEICVASSRVFVQEGIYDKFEKKLLEKAKAW 242
GGK+P ++F DAD +TA D AL G +N G++C A SR+ V+E I+DKF L E+AK
Sbjct: 245 GGKNPNIVFADADFETAVDQALNGVFFNAGQVCSAGSRLLVEESIHDKFVAALAERAKKI 304
Query: 243 LVGDPFDPTVRQGPQISERHFDRILSYIEHGKREGATLLTGGK-PIGD---KGYYIEPTI 298
+G+ D GP +S H +++LSYI+ GK EGA L+ GGK P GD KGY++EPTI
Sbjct: 305 KLGNGLDADTEMGPLVSAEHREKVLSYIQLGKEEGARLVCGGKRPTGDELAKGYFVEPTI 364
Query: 299 FTNVKEDMIIAKEEIFGPVMALMKFKTVEEAIKSANNTQYGLAAGIVTKDLNVANTVSRS 358
F +V M I +EEIFGPV+ + +F T EEAI+ AN+T YGLA + TKD+ AN V+R
Sbjct: 365 FDDVDRTMRIVQEEIFGPVLTVERFDTEEEAIRLANDTPYGLAGAVWTKDIARANRVARR 424
Query: 359 IRAGIIWINCYFGFSMDCPYGGYKMSGFGREYGLESLYKYLQIKSV 404
+RAG +WIN Y + + P+GGYK SG GRE G L +Y + K +
Sbjct: 425 LRAGTVWINDYHPYFAEAPWGGYKQSGIGRELGPTGLEEYQETKHI 470
|
Included in this CD is the NAD+-dependent, betaine aldehyde dehydrogenase (BADH, GbsA, EC=1.2.1.8) of Bacillus subtilis involved in the synthesis of the osmoprotectant glycine betaine from choline or glycine betaine aldehyde. Length = 482 |
| >gnl|CDD|143421 cd07103, ALDH_F5_SSADH_GabD, Mitochondrial succinate-semialdehyde dehydrogenase and ALDH family members 5A1 and 5F1-like | Back alignment and domain information |
|---|
Score = 471 bits (1214), Expect = e-165
Identities = 184/405 (45%), Positives = 260/405 (64%), Gaps = 3/405 (0%)
Query: 1 MWKFADLIEEHVEELAALDALDAGKVYLRAKTAEIPGAAEFLRFFAGAADKIHGEVLKMS 60
+ ++ADLI E E+LA L L+ GK A+ E+ AA FL +FA A +I+G +
Sbjct: 47 LRRWADLIRERAEDLARLLTLEQGKPLAEAR-GEVDYAASFLEWFAEEARRIYGRTIPSP 105
Query: 61 SE-LQGYTLREPVGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLTALYYAH 119
+ + +++PVGVV I PWNFP M K++PALAAGCT+++KPAE+TPL+AL A
Sbjct: 106 APGKRILVIKQPVGVVAAITPWNFPAAMITRKIAPALAAGCTVVLKPAEETPLSALALAE 165
Query: 120 LAKLAGIPDGVLNVVPGFGPTAGAAICSHMDIDYVCFTGSTDVGRLVMQAAAASNLKQVS 179
LA+ AG+P GVLNVV G G A+C+ + + FTGST VG+L+M AA +K+VS
Sbjct: 166 LAEEAGLPAGVLNVVTGSPAEIGEALCASPRVRKISFTGSTAVGKLLMAQAA-DTVKRVS 224
Query: 180 LELGGKSPLLIFDDADLDTAADVALLGNLYNKGEICVASSRVFVQEGIYDKFEKKLLEKA 239
LELGG +P ++FDDADLD A D A+ N G+ CV ++R++V E IYD+F +KL+E+
Sbjct: 225 LELGGNAPFIVFDDADLDKAVDGAIASKFRNAGQTCVCANRIYVHESIYDEFVEKLVERV 284
Query: 240 KAWLVGDPFDPTVRQGPQISERHFDRILSYIEHGKREGATLLTGGKPIGDKGYYIEPTIF 299
K VG+ D GP I+ER +++ + +E +GA +LTGGK +G GY+ EPT+
Sbjct: 285 KKLKVGNGLDEGTDMGPLINERAVEKVEALVEDAVAKGAKVLTGGKRLGLGGYFYEPTVL 344
Query: 300 TNVKEDMIIAKEEIFGPVMALMKFKTVEEAIKSANNTQYGLAAGIVTKDLNVANTVSRSI 359
T+V +DM+I EE FGPV ++ F T +E I AN+T YGLAA + T+DL A V+ ++
Sbjct: 345 TDVTDDMLIMNEETFGPVAPIIPFDTEDEVIARANDTPYGLAAYVFTRDLARAWRVAEAL 404
Query: 360 RAGIIWINCYFGFSMDCPYGGYKMSGFGREYGLESLYKYLQIKSV 404
AG++ IN + P+GG K SG GRE G E L +YL+ K V
Sbjct: 405 EAGMVGINTGLISDAEAPFGGVKESGLGREGGKEGLEEYLETKYV 449
|
Succinate-semialdehyde dehydrogenase, mitochondrial (SSADH, GabD, EC=1.2.1.24) catalyzes the NAD+-dependent oxidation of succinate semialdehyde (SSA) to succinate. This group includes the human aldehyde dehydrogenase family 5 member A1 (ALDH5A1) which is a mitochondrial homotetramer that converts SSA to succinate in the last step of 4-aminobutyric acid (GABA) catabolism. This CD also includes the Arabidopsis SSADH gene product ALDH5F1. Mutations in this gene result in the accumulation of H2O2, suggesting a role in plant defense against the environmental stress of elevated reactive oxygen species. Length = 451 |
| >gnl|CDD|143427 cd07109, ALDH_AAS00426, Uncharacterized Saccharopolyspora spinosa aldehyde dehydrogenase (AAS00426)-like | Back alignment and domain information |
|---|
Score = 466 bits (1202), Expect = e-163
Identities = 187/410 (45%), Positives = 260/410 (63%), Gaps = 9/410 (2%)
Query: 1 MWKFADLIEEHVEELAALDALDAGKVYLRAKTAEIPGAAEFLRFFAGAADKIHGEVLKMS 60
+ + A LI EH +ELA L++LD GK L A++ AA + ++ GAADK+HGE + +
Sbjct: 48 LLRIARLIREHADELARLESLDTGKP-LTQARADVEAAARYFEYYGGAADKLHGETIPLG 106
Query: 61 SELQGYTLREPVGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLTALYYAHL 120
YT+REP GV GHIIPWN+P + V+PALAAG ++VKPAE PLTAL A L
Sbjct: 107 PGYFVYTVREPHGVTGHIIPWNYPLQITGRSVAPALAAGNAVVVKPAEDAPLTALRLAEL 166
Query: 121 AKLAGIPDGVLNVVPGFGPTAGAAICSHMDIDYVCFTGSTDVGRLVMQAAAASNLKQVSL 180
A+ AG+P G LNVV G G AGAA+ +H +D++ FTGS + G VM+ AAA N+ V+L
Sbjct: 167 AEEAGLPAGALNVVTGLGAEAGAALVAHPGVDHISFTGSVETGIAVMR-AAAENVVPVTL 225
Query: 181 ELGGKSPLLIFDDADLDTAADVALLGNLYNKGEICVASSRVFVQEGIYDKFEKKLLEKAK 240
ELGGKSP ++F DADL+ A V + + N G+ C A SR+ V IYD+ ++L+E+ +
Sbjct: 226 ELGGKSPQIVFADADLEAALPVVVNAIIQNAGQTCSAGSRLLVHRSIYDEVLERLVERFR 285
Query: 241 AWLVGDPF-DPTVRQGPQISERHFDRILSYIEHGKREGATLLTGGKPIGD---KGYYIEP 296
A VG DP + GP IS + DR+ ++ + GA ++ GG+ GY++ P
Sbjct: 286 ALRVGPGLEDPDL--GPLISAKQLDRVEGFVARARARGARIVAGGRIAEGAPAGGYFVAP 343
Query: 297 TIFTNVKEDMIIAKEEIFGPVMALMKFKTVEEAIKSANNTQYGLAAGIVTKDLNVANTVS 356
T+ +V D +A+EEIFGPV+A+M F EAI AN T YGL AG+ T+D + A V+
Sbjct: 344 TLLDDVPPDSRLAQEEIFGPVLAVMPFDDEAEAIALANGTDYGLVAGVWTRDGDRALRVA 403
Query: 357 RSIRAGIIWINCYF-GFSMDCPYGGYKMSGFGREYGLESLYKYLQIKSVV 405
R +RAG +++N Y G ++ P+GG K SG GRE GLE+LY Y Q K+V
Sbjct: 404 RRLRAGQVFVNNYGAGGGIELPFGGVKKSGHGREKGLEALYNYTQTKTVA 453
|
Uncharacterized aldehyde dehydrogenase of Saccharopolyspora spinosa (AAS00426) and other similar sequences, are present in this CD. Length = 454 |
| >gnl|CDD|143409 cd07090, ALDH_F9_TMBADH, NAD+-dependent 4-trimethylaminobutyraldehyde dehydrogenase, ALDH family 9A1 | Back alignment and domain information |
|---|
Score = 461 bits (1187), Expect = e-161
Identities = 185/407 (45%), Positives = 259/407 (63%), Gaps = 8/407 (1%)
Query: 3 KFADLIEEHVEELAALDALDAGKVYLRAKTAEIPGAAEFLRFFAGAADKIHGEVLKMSSE 62
K ADL+ E +E+A L+ +D GK A +I +A+ L ++AG A + GE + +
Sbjct: 49 KAADLLRERNDEIARLETIDNGKPIEEA-RVDIDSSADCLEYYAGLAPTLSGEHVPLPGG 107
Query: 63 LQGYTLREPVGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLTALYYAHLAK 122
YT REP+GV I WN+P + K +PALA G M+ KP+ TPLTAL A +
Sbjct: 108 SFAYTRREPLGVCAGIGAWNYPIQIASWKSAPALACGNAMVYKPSPFTPLTALLLAEILT 167
Query: 123 LAGIPDGVLNVVPGFGPTAGAAICSHMDIDYVCFTGSTDVGRLVMQAAAASNLKQVSLEL 182
AG+PDGV NVV G G T G +C H D+ V FTGS G+ VM +AAA +K V+LEL
Sbjct: 168 EAGLPDGVFNVVQGGGET-GQLLCEHPDVAKVSFTGSVPTGKKVM-SAAAKGIKHVTLEL 225
Query: 183 GGKSPLLIFDDADLDTAADVALLGNLYNKGEICVASSRVFVQEGIYDKFEKKLLEKAKAW 242
GGKSPL+IFDDADL+ A + A++ N ++G++C +RVFVQ I D+F ++L+E+ K
Sbjct: 226 GGKSPLIIFDDADLENAVNGAMMANFLSQGQVCSNGTRVFVQRSIKDEFTERLVERTKKI 285
Query: 243 LVGDPFDPTVRQGPQISERHFDRILSYIEHGKREGATLLTGGKPIG-----DKGYYIEPT 297
+GDP D + G ISE H +++L YIE K+EGA +L GG+ + + G+Y+ P
Sbjct: 286 RIGDPLDEDTQMGALISEEHLEKVLGYIESAKQEGAKVLCGGERVVPEDGLENGFYVSPC 345
Query: 298 IFTNVKEDMIIAKEEIFGPVMALMKFKTVEEAIKSANNTQYGLAAGIVTKDLNVANTVSR 357
+ T+ +DM I +EEIFGPVM+++ F T EE I+ AN+T YGLAAG+ T+DL A+ V
Sbjct: 346 VLTDCTDDMTIVREEIFGPVMSILPFDTEEEVIRRANDTTYGLAAGVFTRDLQRAHRVIA 405
Query: 358 SIRAGIIWINCYFGFSMDCPYGGYKMSGFGREYGLESLYKYLQIKSV 404
++AG WIN Y ++ P+GGYK SGFGRE G +L Y Q+K+V
Sbjct: 406 QLQAGTCWINTYNISPVEVPFGGYKQSGFGRENGTAALEHYTQLKTV 452
|
NAD+-dependent, 4-trimethylaminobutyraldehyde dehydrogenase (TMABADH, EC=1.2.1.47), also known as aldehyde dehydrogenase family 9 member A1 (ALDH9A1) in humans, is a cytosolic tetramer which catalyzes the oxidation of gamma-aminobutyraldehyde involved in 4-aminobutyric acid (GABA) biosynthesis and also oxidizes betaine aldehyde (gamma-trimethylaminobutyraldehyde) which is involved in carnitine biosynthesis. Length = 457 |
| >gnl|CDD|143436 cd07118, ALDH_SNDH, Gluconobacter oxydans L-sorbosone dehydrogenase-like | Back alignment and domain information |
|---|
Score = 459 bits (1183), Expect = e-160
Identities = 192/406 (47%), Positives = 268/406 (66%), Gaps = 4/406 (0%)
Query: 1 MWKFADLIEEHVEELAALDALDAGKVYLRAKTAEIPGAAEFLRFFAGAADKIHGEVLK-M 59
+ K ADLI E LA ++ L++GK +A+ EI GAA+ R+ A A +HG+ +
Sbjct: 49 LLKVADLIRARRERLALIETLESGKPISQAR-GEIEGAADLWRYAASLARTLHGDSYNNL 107
Query: 60 SSELQGYTLREPVGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLTALYYAH 119
++ G LREP+GVVG I PWNFP + K+ ALAAGCT++VKP+E T T L A
Sbjct: 108 GDDMLGLVLREPIGVVGIITPWNFPFLILSQKLPFALAAGCTVVVKPSEFTSGTTLMLAE 167
Query: 120 LAKLAGIPDGVLNVVPGFGPTAGAAICSHMDIDYVCFTGSTDVGRLVMQAAAASNLKQVS 179
L AG+P GV+N+V G+G T G A+ H D+D V FTGST VG+ + AAAA NLK+VS
Sbjct: 168 LLIEAGLPAGVVNIVTGYGATVGQAMTEHPDVDMVSFTGSTRVGKAIA-AAAARNLKKVS 226
Query: 180 LELGGKSPLLIFDDADLDTAADVALLGNLYNKGEICVASSRVFVQEGIYDKFEKKLLEKA 239
LELGGK+P ++F DADLD AAD + G +N GE C + SR+ V E I D F ++ ++
Sbjct: 227 LELGGKNPQIVFADADLDAAADAVVFGVYFNAGECCNSGSRLLVHESIADAFVAAVVARS 286
Query: 240 KAWLVGDPFDPTVRQGPQISERHFDRILSYIEHGKREGATLLTGGKPIGD-KGYYIEPTI 298
+ VGDP DP + G I+E +I Y++ G+ EGATLL GG+ + G + +PTI
Sbjct: 287 RKVRVGDPLDPETKVGAIINEAQLAKITDYVDAGRAEGATLLLGGERLASAAGLFYQPTI 346
Query: 299 FTNVKEDMIIAKEEIFGPVMALMKFKTVEEAIKSANNTQYGLAAGIVTKDLNVANTVSRS 358
FT+V DM IA+EEIFGPV++++ F TV+EAI AN+T YGL+AG+ +KD++ A TV+R
Sbjct: 347 FTDVTPDMAIAREEIFGPVLSVLTFDTVDEAIALANDTVYGLSAGVWSKDIDTALTVARR 406
Query: 359 IRAGIIWINCYFGFSMDCPYGGYKMSGFGREYGLESLYKYLQIKSV 404
IRAG +W+N + S + P+GG+K SG GRE G + +Y ++K+V
Sbjct: 407 IRAGTVWVNTFLDGSPELPFGGFKQSGIGRELGRYGVEEYTELKTV 452
|
Included in this CD is the L-sorbosone dehydrogenase (SNDH) from Gluconobacter oxydans UV10. In G. oxydans, D-sorbitol is converted to 2-keto-L-gulonate (a precursor of L-ascorbic acid) in sequential oxidation steps catalyzed by a FAD-dependent, L-sorbose dehydrogenase and an NAD(P)+-dependent, L-sorbosone dehydrogenase. Length = 454 |
| >gnl|CDD|143428 cd07110, ALDH_F10_BADH, Arabidopsis betaine aldehyde dehydrogenase 1 and 2, ALDH family 10A8 and 10A9-like | Back alignment and domain information |
|---|
Score = 446 bits (1150), Expect = e-155
Identities = 188/409 (45%), Positives = 260/409 (63%), Gaps = 8/409 (1%)
Query: 4 FADLIEEHVEELAALDALDAGKVYLRAKTAEIPGAAEFLRFFAGAADKIH---GEVLKM- 59
A+ + E EELA L+A D GK A ++ A ++A A+++ + +
Sbjct: 50 IAEGVRERREELAELEARDNGKPLDEAA-WDVDDVAGCFEYYADLAEQLDAKAERAVPLP 108
Query: 60 SSELQGYTLREPVGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLTALYYAH 119
S + + REPVGVVG I PWNFP M KV+PALAAGCT+++KP+E T LT L A
Sbjct: 109 SEDFKARVRREPVGVVGLITPWNFPLLMAAWKVAPALAAGCTVVLKPSELTSLTELELAE 168
Query: 120 LAKLAGIPDGVLNVVPGFGPTAGAAICSHMDIDYVCFTGSTDVGRLVMQAAAASNLKQVS 179
+A AG+P GVLNVV G G AGA + +H ID + FTGST G VMQAAA ++K VS
Sbjct: 169 IAAEAGLPPGVLNVVTGTGDEAGAPLAAHPGIDKISFTGSTATGSQVMQAAAQ-DIKPVS 227
Query: 180 LELGGKSPLLIFDDADLDTAADVALLGNLYNKGEICVASSRVFVQEGIYDKFEKKLLEKA 239
LELGGKSP+++FDDADL+ A + A+ G +N G+IC A+SR+ V E I D F ++L A
Sbjct: 228 LELGGKSPIIVFDDADLEKAVEWAMFGCFWNNGQICSATSRLLVHESIADAFLERLATAA 287
Query: 240 KAWLVGDPFDPTVRQGPQISERHFDRILSYIEHGKREGATLLTGGK--PIGDKGYYIEPT 297
+A VGDP + VR GP +S+ ++++LS+I GK EGA LL GG+ +KGY+I PT
Sbjct: 288 EAIRVGDPLEEGVRLGPLVSQAQYEKVLSFIARGKEEGARLLCGGRRPAHLEKGYFIAPT 347
Query: 298 IFTNVKEDMIIAKEEIFGPVMALMKFKTVEEAIKSANNTQYGLAAGIVTKDLNVANTVSR 357
+F +V D I +EEIFGPV+ + F T +EAI AN+++YGLAA ++++D + V+
Sbjct: 348 VFADVPTDSRIWREEIFGPVLCVRSFATEDEAIALANDSEYGLAAAVISRDAERCDRVAE 407
Query: 358 SIRAGIIWINCYFGFSMDCPYGGYKMSGFGREYGLESLYKYLQIKSVVT 406
++ AGI+WINC P+GGYK SG GRE G L YL++K +
Sbjct: 408 ALEAGIVWINCSQPCFPQAPWGGYKRSGIGRELGEWGLDNYLEVKQITR 456
|
Present in this CD are the Arabidopsis betaine aldehyde dehydrogenase (BADH) 1 (chloroplast) and 2 (mitochondria), also known as, aldehyde dehydrogenase family 10 member A8 and aldehyde dehydrogenase family 10 member A9, respectively, and are putative dehydration- and salt-inducible BADHs (EC 1.2.1.8) that catalyze the oxidation of betaine aldehyde to the compatible solute glycine betaine. Length = 456 |
| >gnl|CDD|143456 cd07138, ALDH_CddD_SSP0762, Rhodococcus ruber 6-oxolauric acid dehydrogenase-like | Back alignment and domain information |
|---|
Score = 444 bits (1145), Expect = e-154
Identities = 172/408 (42%), Positives = 246/408 (60%), Gaps = 13/408 (3%)
Query: 3 KFADLIEEHVEELAALDALDAGKVYLRAKTAEIPGAAEFLRFFAGAADKIHGEVLKMSSE 62
+ A+ E +ELA L+ G A+ A++ LR A A E E
Sbjct: 66 RIAEAYEARADELAQAITLEMGAPITLARAAQVGLGIGHLRAAADALKDFEFE------E 119
Query: 63 LQGYTL--REPVGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLTALYYAHL 120
+G +L REP+GV G I PWN+P +KV+PALAAGCT+++KP+E PL+A+ A +
Sbjct: 120 RRGNSLVVREPIGVCGLITPWNWPLNQIVLKVAPALAAGCTVVLKPSEVAPLSAIILAEI 179
Query: 121 AKLAGIPDGVLNVVPGFGPTAGAAICSHMDIDYVCFTGSTDVGRLVMQAAAASNLKQVSL 180
AG+P GV N+V G GP G A+ +H D+D V FTGST G+ V +AAA + +K+V+L
Sbjct: 180 LDEAGLPAGVFNLVNGDGPVVGEALSAHPDVDMVSFTGSTRAGKRVAEAAADT-VKRVAL 238
Query: 181 ELGGKSPLLIFDDADLDTAADVALLGNLYNKGEICVASSRVFVQEGIYDKFEKKLLEKAK 240
ELGGKS +I DDADL+ A + N G+ C A +R+ V Y + E+ A+
Sbjct: 239 ELGGKSANIILDDADLEKAVPRGVAACFANSGQSCNAPTRMLVPRSRYAEAEEIAAAAAE 298
Query: 241 AWLVGDPFDPTVRQGPQISERHFDRILSYIEHGKREGATLLTGG--KPIG-DKGYYIEPT 297
A++VGDP DP GP S FDR+ YI+ G EGA L+ GG +P G ++GY+++PT
Sbjct: 299 AYVVGDPRDPATTLGPLASAAQFDRVQGYIQKGIEEGARLVAGGPGRPEGLERGYFVKPT 358
Query: 298 IFTNVKEDMIIAKEEIFGPVMALMKFKTVEEAIKSANNTQYGLAAGIVTKDLNVANTVSR 357
+F +V DM IA+EEIFGPV++++ + +EAI AN+T YGLA + + D A V+R
Sbjct: 359 VFADVTPDMTIAREEIFGPVLSIIPYDDEDEAIAIANDTPYGLAGYVWSADPERARAVAR 418
Query: 358 SIRAGIIWINCYFGFSMDCPYGGYKMSGFGREYGLESLYKYLQIKSVV 405
+RAG + IN F+ P+GGYK SG GRE+G L ++L++KS+
Sbjct: 419 RLRAGQVHIN-GAAFNPGAPFGGYKQSGNGREWGRYGLEEFLEVKSIQ 465
|
The 6-oxolauric acid dehydrogenase (CddD) from Rhodococcus ruber SC1 which converts 6-oxolauric acid to dodecanedioic acid, and the aldehyde dehydrogenase (locus SSP0762) from Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 and other similar sequences, are included in this CD. Length = 466 |
| >gnl|CDD|200131 TIGR01804, BADH, glycine betaine aldehyde dehydrogenase | Back alignment and domain information |
|---|
Score = 438 bits (1129), Expect = e-152
Identities = 186/404 (46%), Positives = 258/404 (63%), Gaps = 5/404 (1%)
Query: 3 KFADLIEEHVEELAALDALDAGKVYLRAKTAEIPGAAEFLRFFAGAADKIHGEVLKMSSE 62
+ ADLI E EELA L+ LD GK A++ A+ FFAG A ++GE++ +
Sbjct: 65 RAADLIRERNEELAKLETLDTGKTLQETIVADMDSGADVFEFFAGLAPALNGEIIPLGGP 124
Query: 63 LQGYTLREPVGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLTALYYAHLAK 122
YT+REP+GV I WN+P + K++PALAAG M+ KP+E TPLTAL A + +
Sbjct: 125 SFAYTIREPLGVCVGIGAWNYPLQIASWKIAPALAAGNAMVFKPSENTPLTALKVAEIME 184
Query: 123 LAGIPDGVLNVVPGFGPTAGAAICSHMDIDYVCFTGSTDVGRLVMQAAAASNLKQVSLEL 182
AG+P GV NVV G G G + +H D+ V FTG G+ +M AAAA +LK V++EL
Sbjct: 185 EAGLPKGVFNVVQGDGAEVGPLLVNHPDVAKVSFTGGVPTGKKIM-AAAAGHLKHVTMEL 243
Query: 183 GGKSPLLIFDDADLDTAADVALLGNLYNKGEICVASSRVFVQEGIYDKFEKKLLEKAKAW 242
GGKSPL++FDDADL++A D A+LGN ++ G++C +RVFV + I ++F +L+E+ +
Sbjct: 244 GGKSPLIVFDDADLESAVDGAMLGNFFSAGQVCSNGTRVFVHKKIKERFLARLVERTERI 303
Query: 243 LVGDPFDPTVRQGPQISERHFDRILSYIEHGKREGATLLTGGK----PIGDKGYYIEPTI 298
+GDPFD GP IS H D++LSYIE GK EGATL TGG G+++EPT+
Sbjct: 304 KLGDPFDEATEMGPLISAAHRDKVLSYIEKGKAEGATLATGGGRPENVGLQNGFFVEPTV 363
Query: 299 FTNVKEDMIIAKEEIFGPVMALMKFKTVEEAIKSANNTQYGLAAGIVTKDLNVANTVSRS 358
F + +DM I +EEIFGPVM ++ F +E I AN+T+YGLA G+ T DL A+ V+
Sbjct: 364 FADCTDDMTIVREEIFGPVMTVLTFSDEDEVIARANDTEYGLAGGVFTADLGRAHRVADQ 423
Query: 359 IRAGIIWINCYFGFSMDCPYGGYKMSGFGREYGLESLYKYLQIK 402
+ AG +WIN Y + + P+GGYK SG GRE G +L Y ++K
Sbjct: 424 LEAGTVWINTYNLYPAEAPFGGYKQSGIGRENGKAALAHYTEVK 467
|
Under osmotic stress, betaine aldehyde dehydrogenase oxidizes glycine betaine aldehyde into the osmoprotectant glycine betaine, via the second of two oxidation steps from exogenously supplied choline or betaine aldehyde. This choline-glycine betaine synthesis pathway can be found in gram-positive and gram-negative bacteria. In Escherichia coli, betaine aldehyde dehydrogenase (betB) is osmotically co-induced with choline dehydrogenase (betA) in the presence of choline. These dehydrogenases are located in a betaine gene cluster with the upstream choline transporter (betT) and transcriptional regulator (betI). Similar to E.coli, betaine synthesis in Staphylococcus xylosus is also influenced by osmotic stress and the presence of choline with genes localized in a functionally equivalent gene cluster. Organization of the betaine gene cluster in Sinorhizobium meliloti and Bacillus subtilis differs from that of E.coli by the absence of upstream choline transporter and transcriptional regulator homologues. Additionally, B.subtilis co-expresses a type II alcohol dehydrogenase with betaine aldehyde dehydrogenase instead of choline dehydrogenase as in E.coli, St.xylosus, and Si.meliloti. Betaine aldehyde dehydrogenase is a member of the aldehyde dehydrogenase family (pfam00171) [Cellular processes, Adaptations to atypical conditions]. Length = 467 |
| >gnl|CDD|143458 cd07140, ALDH_F1L_FTFDH, 10-formyltetrahydrofolate dehydrogenase, ALDH family 1L | Back alignment and domain information |
|---|
Score = 439 bits (1130), Expect = e-152
Identities = 185/410 (45%), Positives = 277/410 (67%), Gaps = 6/410 (1%)
Query: 1 MWKFADLIEEHVEELAALDALDAGKVYLRAKTAEIPGAAEFLRFFAGAADKIHGEVLKMS 60
M++ ADL+EEH EELA +++LD+G VY A + + + R+FAG DKI G+ + ++
Sbjct: 73 MYRLADLMEEHQEELATIESLDSGAVYTLALKTHVGMSIQTFRYFAGWCDKIQGKTIPIN 132
Query: 61 ----SELQGYTLREPVGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLTALY 116
+ T REP+GV G +IPWN+P M K++ LAAG T+++KPA+ TPLTAL
Sbjct: 133 QARPNRNLTLTKREPIGVCGIVIPWNYPLMMLAWKMAACLAAGNTVVLKPAQVTPLTALK 192
Query: 117 YAHLAKLAGIPDGVLNVVPGFGPTAGAAICSHMDIDYVCFTGSTDVGRLVMQAAAASNLK 176
+A L AG P GV+N++PG G G + H D+ + FTGST +G+ +M++ A SNLK
Sbjct: 193 FAELTVKAGFPKGVINILPGSGSLVGQRLSDHPDVRKLGFTGSTPIGKHIMKSCAVSNLK 252
Query: 177 QVSLELGGKSPLLIFDDADLDTAADVALLGNLYNKGEICVASSRVFVQEGIYDKFEKKLL 236
+VSLELGGKSPL+IF D D+D A + + +NKGE C+A+ R+FV+E I+D+F ++++
Sbjct: 253 KVSLELGGKSPLIIFADCDMDKAVRMGMSSVFFNKGENCIAAGRLFVEESIHDEFVRRVV 312
Query: 237 EKAKAWLVGDPFDPTVRQGPQISERHFDRILSYIEHGKREGATLLTGGKPIGDKGYYIEP 296
E+ K +GDP D + GPQ + H D+++ Y E G +EGATL+ GGK + G++ EP
Sbjct: 313 EEVKKMKIGDPLDRSTDHGPQNHKAHLDKLVEYCERGVKEGATLVYGGKQVDRPGFFFEP 372
Query: 297 TIFTNVKEDMIIAKEEIFGPVMALMKFKT--VEEAIKSANNTQYGLAAGIVTKDLNVANT 354
T+FT+V++ M IAKEE FGP+M + KF V+ ++ AN+T+YGLA+G+ TKD+N A
Sbjct: 373 TVFTDVEDHMFIAKEESFGPIMIISKFDDGDVDGVLQRANDTEYGLASGVFTKDINKALY 432
Query: 355 VSRSIRAGIIWINCYFGFSMDCPYGGYKMSGFGREYGLESLYKYLQIKSV 404
VS + AG +++N Y + P+GG+K SGFG++ G E+L +YL+ K+V
Sbjct: 433 VSDKLEAGTVFVNTYNKTDVAAPFGGFKQSGFGKDLGEEALNEYLKTKTV 482
|
10-formyltetrahydrofolate dehydrogenase (FTHFDH, EC=1.5.1.6), also known as aldehyde dehydrogenase family 1 member L1 (ALDH1L1) in humans, is a multi-domain homotetramer with an N-terminal formyl transferase domain and a C-terminal ALDH domain. FTHFDH catalyzes an NADP+-dependent dehydrogenase reaction resulting in the conversion of 10-formyltetrahydrofolate to tetrahydrofolate and CO2. The ALDH domain is also capable of the oxidation of short chain aldehydes to their corresponding acids. Length = 486 |
| >gnl|CDD|143471 cd07559, ALDH_ACDHII_AcoD-like, Ralstonia eutrophus NAD+-dependent acetaldehyde dehydrogenase II and Staphylococcus aureus AldA1 (SACOL0154)-like | Back alignment and domain information |
|---|
Score = 439 bits (1130), Expect = e-152
Identities = 196/413 (47%), Positives = 259/413 (62%), Gaps = 15/413 (3%)
Query: 3 KFADLIEEHVEELAALDALDAGKVYLRAKTAEIPGAAEFLRFFAGAADKIHGEVLKMSSE 62
K AD IEE++E LA + LD GK A+IP A + R+FAG G + ++ +
Sbjct: 68 KIADRIEENLELLAVAETLDNGKPIRETLAADIPLAIDHFRYFAGVIRAQEGSLSEIDED 127
Query: 63 LQGYTLREPVGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLTALYYAHLAK 122
Y EP+GVVG IIPWNFP M K++PALAAG T+++KPA QTPL+ L L +
Sbjct: 128 TLSYHFHEPLGVVGQIIPWNFPLLMAAWKLAPALAAGNTVVLKPASQTPLSILV---LME 184
Query: 123 LAG--IPDGVLNVVPGFGPTAGAAICSHMDIDYVCFTGSTDVGRLVMQAAAASNLKQVSL 180
L G +P GV+NVV GFG AG + SH I + FTGST VGRL+MQ AA NL V+L
Sbjct: 185 LIGDLLPKGVVNVVTGFGSEAGKPLASHPRIAKLAFTGSTTVGRLIMQYAA-ENLIPVTL 243
Query: 181 ELGGKSPLLIFDDA-----DLDTAADVALLGNLYNKGEICVASSRVFVQEGIYDKFEKKL 235
ELGGKSP + FDDA D D A+ LG +N+GE+C SR VQE IYD+F ++
Sbjct: 244 ELGGKSPNIFFDDAMDADDDFDDKAEEGQLGFAFNQGEVCTCPSRALVQESIYDEFIERA 303
Query: 236 LEKAKAWLVGDPFDPTVRQGPQISERHFDRILSYIEHGKREGATLLTGGK----PIGDKG 291
+E+ +A VG+P DP G Q+S+ ++ILSY++ GK EGA +LTGG+ DKG
Sbjct: 304 VERFEAIKVGNPLDPETMMGAQVSKDQLEKILSYVDIGKEEGAEVLTGGERLTLGGLDKG 363
Query: 292 YYIEPTIFTNVKEDMIIAKEEIFGPVMALMKFKTVEEAIKSANNTQYGLAAGIVTKDLNV 351
Y+ EPT+ DM I +EEIFGPV+A++ FK EEAI AN+T+YGL G+ T+D+N
Sbjct: 364 YFYEPTLIKGGNNDMRIFQEEIFGPVLAVITFKDEEEAIAIANDTEYGLGGGVWTRDINR 423
Query: 352 ANTVSRSIRAGIIWINCYFGFSMDCPYGGYKMSGFGREYGLESLYKYLQIKSV 404
A V+R I+ G +W+NCY + P+GGYK SG GRE L Y Q K++
Sbjct: 424 ALRVARGIQTGRVWVNCYHQYPAHAPFGGYKKSGIGRETHKMMLDHYQQTKNI 476
|
Included in this CD is the NAD+-dependent, acetaldehyde dehydrogenase II (AcDHII, AcoD, EC=1.2.1.3) from Ralstonia (Alcaligenes) eutrophus H16 involved in the catabolism of acetoin and ethanol, and similar proteins, such as, the dimeric dihydrolipoamide dehydrogenase of the acetoin dehydrogenase enzyme system of Klebsiella pneumonia. Also included are sequences similar to the NAD+-dependent chloroacetaldehyde dehydrogenases (AldA and AldB) of Xanthobacter autotrophicus GJ10 which are involved in the degradation of 1,2-dichloroethane, as well as, the uncharacterized aldehyde dehydrogenase from Staphylococcus aureus (AldA1, locus SACOL0154) and other similar sequences. Length = 480 |
| >gnl|CDD|143411 cd07092, ALDH_ABALDH-YdcW, Escherichia coli NAD+-dependent gamma-aminobutyraldehyde dehydrogenase YdcW-like | Back alignment and domain information |
|---|
Score = 437 bits (1126), Expect = e-152
Identities = 174/410 (42%), Positives = 248/410 (60%), Gaps = 10/410 (2%)
Query: 1 MWKFADLIEEHVEELAALDALDAGKVYLRAKTAEIPGAAEFLRFFAGAADKIHGEVLKMS 60
+ K AD IEE+ EELAAL++ + GK + E+PGA + RFFAGAA + G +
Sbjct: 47 LLKLADAIEENAEELAALESRNTGKPLHLVRDDELPGAVDNFRFFAGAARTLEGPA---A 103
Query: 61 SE-LQGYT---LREPVGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLTALY 116
E L G+T REP+GVV I PWN+P M K++PALAAG T+++KP+E TPLT L
Sbjct: 104 GEYLPGHTSMIRREPIGVVAQIAPWNYPLMMAAWKIAPALAAGNTVVLKPSETTPLTTLL 163
Query: 117 YAHLAKLAGIPDGVLNVVPGFGPTAGAAICSHMDIDYVCFTGSTDVGRLVMQAAAASNLK 176
A LA +P GV+NVV G G +AG A+ +H + V TGS G+ V +AAA LK
Sbjct: 164 LAELAA-EVLPPGVVNVVCGGGASAGDALVAHPRVRMVSLTGSVRTGKKVARAAAD-TLK 221
Query: 177 QVSLELGGKSPLLIFDDADLDTAADVALLGNLYNKGEICVASSRVFVQEGIYDKFEKKLL 236
+V LELGGK+P+++FDDADLD A YN G+ C A+ RV+V E +YD+F L+
Sbjct: 222 RVHLELGGKAPVIVFDDADLDAAVAGIATAGYYNAGQDCTAACRVYVHESVYDEFVAALV 281
Query: 237 EKAKAWLVGDPFDPTVRQGPQISERHFDRILSYIEHGKREGATLLTGGKPIGDKGYYIEP 296
E A VGDP D GP S +R+ ++E A +LTGG+ GY+ EP
Sbjct: 282 EAVSAIRVGDPDDEDTEMGPLNSAAQRERVAGFVE-RAPAHARVLTGGRRAEGPGYFYEP 340
Query: 297 TIFTNVKEDMIIAKEEIFGPVMALMKFKTVEEAIKSANNTQYGLAAGIVTKDLNVANTVS 356
T+ V +D I +EEIFGPV+ + F +EAI+ AN+ +YGLA+ + T+D+ A +S
Sbjct: 341 TVVAGVAQDDEIVQEEIFGPVVTVQPFDDEDEAIELANDVEYGLASSVWTRDVGRAMRLS 400
Query: 357 RSIRAGIIWINCYFGFSMDCPYGGYKMSGFGREYGLESLYKYLQIKSVVT 406
+ G +W+N + + + P+GG+K SG+G++ + +L Y +IK V+
Sbjct: 401 ARLDFGTVWVNTHIPLAAEMPHGGFKQSGYGKDLSIYALEDYTRIKHVMV 450
|
NAD+-dependent, tetrameric, gamma-aminobutyraldehyde dehydrogenase (ABALDH), YdcW of Escherichia coli K12, catalyzes the oxidation of gamma-aminobutyraldehyde to gamma-aminobutyric acid. ABALDH can also oxidize n-alkyl medium-chain aldehydes, but with a lower catalytic efficiency. Length = 450 |
| >gnl|CDD|237391 PRK13473, PRK13473, gamma-aminobutyraldehyde dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 435 bits (1121), Expect = e-151
Identities = 172/409 (42%), Positives = 243/409 (59%), Gaps = 10/409 (2%)
Query: 1 MWKFADLIEEHVEELAALDALDAGKVYLRAKTAEIPGAAEFLRFFAGAADKIHGEVLKMS 60
+ K AD IEE+ +E A L++L+ GK A EIP + RFFAGAA + G K +
Sbjct: 67 LLKLADAIEENADEFARLESLNCGKPLHLALNDEIPAIVDVFRFFAGAARCLEG---KAA 123
Query: 61 SE-LQGYT---LREPVGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLTALY 116
E L+G+T R+PVGVV I PWN+P M K++PALAAG T+++KP+E TPLTAL
Sbjct: 124 GEYLEGHTSMIRRDPVGVVASIAPWNYPLMMAAWKLAPALAAGNTVVLKPSEITPLTALK 183
Query: 117 YAHLAKLAGIPDGVLNVVPGFGPTAGAAICSHMDIDYVCFTGSTDVGRLVMQAAAASNLK 176
A LA +P GVLNVV G G T G A+ H + V TGS G+ V+ AAA S +K
Sbjct: 184 LAELAADI-LPPGVLNVVTGRGATVGDALVGHPKVRMVSLTGSIATGKHVLSAAADS-VK 241
Query: 177 QVSLELGGKSPLLIFDDADLDTAADVALLGNLYNKGEICVASSRVFVQEGIYDKFEKKLL 236
+ LELGGK+P+++FDDADLD + YN G+ C A+ R++ Q GIYD KL
Sbjct: 242 RTHLELGGKAPVIVFDDADLDAVVEGIRTFGYYNAGQDCTAACRIYAQRGIYDDLVAKLA 301
Query: 237 EKAKAWLVGDPFDPTVRQGPQISERHFDRILSYIEHGKREG-ATLLTGGKPIGDKGYYIE 295
VGDP D GP IS H DR+ ++E K G ++TGG+ KGYY E
Sbjct: 302 AAVATLKVGDPDDEDTELGPLISAAHRDRVAGFVERAKALGHIRVVTGGEAPDGKGYYYE 361
Query: 296 PTIFTNVKEDMIIAKEEIFGPVMALMKFKTVEEAIKSANNTQYGLAAGIVTKDLNVANTV 355
PT+ ++D I + E+FGPV+++ F ++A++ AN++ YGLA+ + T+D+ A+ V
Sbjct: 362 PTLLAGARQDDEIVQREVFGPVVSVTPFDDEDQAVRWANDSDYGLASSVWTRDVGRAHRV 421
Query: 356 SRSIRAGIIWINCYFGFSMDCPYGGYKMSGFGREYGLESLYKYLQIKSV 404
S ++ G W+N +F + P+GG K SG+G++ L L Y ++ V
Sbjct: 422 SARLQYGCTWVNTHFMLVSEMPHGGQKQSGYGKDMSLYGLEDYTVVRHV 470
|
Length = 475 |
| >gnl|CDD|143408 cd07089, ALDH_CddD-AldA-like, Rhodococcus ruber 6-oxolauric acid dehydrogenase-like and related proteins | Back alignment and domain information |
|---|
Score = 431 bits (1110), Expect = e-149
Identities = 176/409 (43%), Positives = 245/409 (59%), Gaps = 8/409 (1%)
Query: 4 FADLIEEHVEELAALDALDAGKVYLRAKTAEIPGAAEFLRFFAGAADKIHGEV-LKMSSE 62
+ +E EEL AL + G + A+ ++ G LR+FA AD E L + +
Sbjct: 51 LHEALEARKEELRALLVAEVGAPVMTARAMQVDGPIGHLRYFADLADSFPWEFDLPVPAL 110
Query: 63 LQGYTL----REPVGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLTALYYA 118
G REPVGVV I PWNFP + K++PALAAG T+++KPA TPL+AL
Sbjct: 111 RGGPGRRVVRREPVGVVAAITPWNFPFFLNLAKLAPALAAGNTVVLKPAPDTPLSALLLG 170
Query: 119 HLAKLAGIPDGVLNVVPGFGPTAGAAICSHMDIDYVCFTGSTDVGRLVMQAAAASNLKQV 178
+ +P GV+NVV G G A+ + +D V FTGST VGR +M A AA+ LK+V
Sbjct: 171 EIIAETDLPAGVVNVVTGSDNAVGEALTTDPRVDMVSFTGSTAVGRRIM-AQAAATLKRV 229
Query: 179 SLELGGKSPLLIFDDADLDTAADVALLGNLYNKGEICVASSRVFVQEGIYDKFEKKLLEK 238
LELGGKS ++ DDADL AA A+ ++N G+ C ++R+ V YD+ + L
Sbjct: 230 LLELGGKSANIVLDDADLAAAAPAAVGVCMHNAGQGCALTTRLLVPRSRYDEVVEALAAA 289
Query: 239 AKAWLVGDPFDPTVRQGPQISERHFDRILSYIEHGKREGATLLTGGK-PIG-DKGYYIEP 296
+A VGDP DP GP IS DR+ YI G+ EGA L+TGG P G DKG+Y+EP
Sbjct: 290 FEALPVGDPADPGTVMGPLISAAQRDRVEGYIARGRDEGARLVTGGGRPAGLDKGFYVEP 349
Query: 297 TIFTNVKEDMIIAKEEIFGPVMALMKFKTVEEAIKSANNTQYGLAAGIVTKDLNVANTVS 356
T+F +V DM IA+EEIFGPV+ ++ + +EA++ AN++ YGL+ G+ + D++ A V+
Sbjct: 350 TLFADVDNDMRIAQEEIFGPVLVVIPYDDDDEAVRIANDSDYGLSGGVWSADVDRAYRVA 409
Query: 357 RSIRAGIIWINCYFGFSMDCPYGGYKMSGFGREYGLESLYKYLQIKSVV 405
R IR G + IN G+ D P+GGYK SG GRE G+E L ++L+ KS+
Sbjct: 410 RRIRTGSVGINGGGGYGPDAPFGGYKQSGLGRENGIEGLEEFLETKSIA 458
|
The 6-oxolauric acid dehydrogenase (CddD) from Rhodococcus ruber SC1 which converts 6-oxolauric acid to dodecanedioic acid; and the aldehyde dehydrogenase (locus SSP0762) from Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 and also, the Mycobacterium tuberculosis H37Rv ALDH AldA (locus Rv0768) sequence; and other similar sequences, are included in this CD. Length = 459 |
| >gnl|CDD|215260 PLN02467, PLN02467, betaine aldehyde dehydrogenase | Back alignment and domain information |
|---|
Score = 418 bits (1077), Expect = e-144
Identities = 187/420 (44%), Positives = 254/420 (60%), Gaps = 18/420 (4%)
Query: 5 ADLIEEHVEELAALDALDAGKVYLRAKTAEIPGAAEFLRFFAGAADKIHGEV-----LKM 59
A I E ELA L+ LD GK A ++ A ++A A+ + + L M
Sbjct: 82 AAKITERKSELAKLETLDCGKPLDEA-AWDMDDVAGCFEYYADLAEALDAKQKAPVSLPM 140
Query: 60 SSELQGYTLREPVGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLTALYYAH 119
+GY L+EP+GVVG I PWN+P M KV+PALAAGCT ++KP+E +T L A
Sbjct: 141 E-TFKGYVLKEPLGVVGLITPWNYPLLMATWKVAPALAAGCTAVLKPSELASVTCLELAD 199
Query: 120 LAKLAGIPDGVLNVVPGFGPTAGAAICSHMDIDYVCFTGSTDVGRLVMQAAAASNLKQVS 179
+ + G+P GVLNVV G G AGA + SH +D + FTGST GR +M AAA +K VS
Sbjct: 200 ICREVGLPPGVLNVVTGLGTEAGAPLASHPGVDKIAFTGSTATGRKIMTAAAQ-MVKPVS 258
Query: 180 LELGGKSPLLIFDDADLDTAADVALLGNLYNKGEICVASSRVFVQEGIYDKFEKKLLEKA 239
LELGGKSP+++FDD DLD A + A+ G + G+IC A+SR+ V E I +F +KL++ A
Sbjct: 259 LELGGKSPIIVFDDVDLDKAVEWAMFGCFWTNGQICSATSRLLVHERIASEFLEKLVKWA 318
Query: 240 KAWLVGDPFDPTVRQGPQISERHFDRILSYIEHGKREGATLLTGGK--PIGDKGYYIEPT 297
K + DP + R GP +SE ++++L +I K EGAT+L GGK KG++IEPT
Sbjct: 319 KNIKISDPLEEGCRLGPVVSEGQYEKVLKFISTAKSEGATILCGGKRPEHLKKGFFIEPT 378
Query: 298 IFTNVKEDMIIAKEEIFGPVMALMKFKTVEEAIKSANNTQYGLAAGIVTKDLNVANTVSR 357
I T+V M I +EE+FGPV+ + F T +EAI+ AN++ YGLA +++ DL VS
Sbjct: 379 IITDVTTSMQIWREEVFGPVLCVKTFSTEDEAIELANDSHYGLAGAVISNDLERCERVSE 438
Query: 358 SIRAGIIWINCYFGFSMDC----PYGGYKMSGFGREYGLESLYKYLQIKSVVTPIYNSPW 413
+ +AGI+WINC S C P+GG K SGFGRE G L YL +K V I + PW
Sbjct: 439 AFQAGIVWINC----SQPCFCQAPWGGIKRSGFGRELGEWGLENYLSVKQVTKYISDEPW 494
|
Length = 503 |
| >gnl|CDD|143457 cd07139, ALDH_AldA-Rv0768, Mycobacterium tuberculosis aldehyde dehydrogenase AldA-like | Back alignment and domain information |
|---|
Score = 415 bits (1069), Expect = e-143
Identities = 168/406 (41%), Positives = 239/406 (58%), Gaps = 6/406 (1%)
Query: 3 KFADLIEEHVEELAALDALDAGKVYLRAKTAEIPGAAEFLRFFAGAADKIHGEVLKMSSE 62
+ AD +E +ELA L + G ++ A+ PG A LR++A A E + S
Sbjct: 68 RLADALEARADELARLWTAENGMPISWSRRAQGPGPAALLRYYAALARDFPFEERRPGSG 127
Query: 63 L-QGYTLREPVGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLTALYYAHLA 121
REPVGVV I+PWN P + +K++PALAAGCT+++KP+ +TPL A A A
Sbjct: 128 GGHVLVRREPVGVVAAIVPWNAPLFLAALKIAPALAAGCTVVLKPSPETPLDAYLLAEAA 187
Query: 122 KLAGIPDGVLNVVPGFGPTAGAAICSHMDIDYVCFTGSTDVGRLVMQAAAASNLKQVSLE 181
+ AG+P GV+NVVP G + H +D V FTGST GR + A L +V+LE
Sbjct: 188 EEAGLPPGVVNVVPA-DREVGEYLVRHPGVDKVSFTGSTAAGRRIA-AVCGERLARVTLE 245
Query: 182 LGGKSPLLIFDDADLDTAADVALLGNLYNKGEICVASSRVFVQEGIYDKFEKKLLEKAKA 241
LGGKS ++ DDADLD A + +L N G++CVA +R+ V YD+ + L A
Sbjct: 246 LGGKSAAIVLDDADLDAAVPGLVPASLMNNGQVCVALTRILVPRSRYDEVVEALAAAVAA 305
Query: 242 WLVGDPFDPTVRQGPQISERHFDRILSYIEHGKREGATLLTGGK-PIG-DKGYYIEPTIF 299
VGDP DP + GP S R +R+ YI G+ EGA L+TGG P G D+G+++EPT+F
Sbjct: 306 LKVGDPLDPATQIGPLASARQRERVEGYIAKGRAEGARLVTGGGRPAGLDRGWFVEPTLF 365
Query: 300 TNVKEDMIIAKEEIFGPVMALMKFKTVEEAIKSANNTQYGLAAGIVTKDLNVANTVSRSI 359
+V DM IA+EEIFGPV++++ + ++A++ AN++ YGL+ + T D+ V+R I
Sbjct: 366 ADVDNDMRIAQEEIFGPVLSVIPYDDEDDAVRIANDSDYGLSGSVWTADVERGLAVARRI 425
Query: 360 RAGIIWINCYFGFSMDCPYGGYKMSGFGREYGLESLYKYLQIKSVV 405
R G + +N F P+GG+K SG GRE G E L YL+ KS+
Sbjct: 426 RTGTVGVN-GFRLDFGAPFGGFKQSGIGREGGPEGLDAYLETKSIY 470
|
The Mycobacterium tuberculosis NAD+-dependent, aldehyde dehydrogenase PDB structure, 3B4W, and the Mycobacterium tuberculosis H37Rv aldehyde dehydrogenase AldA (locus Rv0768) sequence, as well as the Rhodococcus rhodochrous ALDH involved in haloalkane catabolism, and other similar sequences, are included in this CD. Length = 471 |
| >gnl|CDD|143435 cd07117, ALDH_StaphAldA1, Uncharacterized Staphylococcus aureus AldA1 (SACOL0154) aldehyde dehydrogenase-like | Back alignment and domain information |
|---|
Score = 414 bits (1065), Expect = e-142
Identities = 187/406 (46%), Positives = 260/406 (64%), Gaps = 6/406 (1%)
Query: 3 KFADLIEEHVEELAALDALDAGKVYLRAKTAEIPGAAEFLRFFAGAADKIHGEVLKMSSE 62
K AD+I+E+ E LA ++ LD GK + +IP AA+ R+FAG G + +
Sbjct: 68 KIADIIDENKELLAMVETLDNGKPIRETRAVDIPLAADHFRYFAGVIRAEEGSANMIDED 127
Query: 63 LQGYTLREPVGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLTALYYAHLAK 122
LREP+GVVG IIPWNFP M K++PALAAG T+++KP+ T L+ L A + +
Sbjct: 128 TLSIVLREPIGVVGQIIPWNFPFLMAAWKLAPALAAGNTVVIKPSSTTSLSLLELAKIIQ 187
Query: 123 LAGIPDGVLNVVPGFGPTAGAAICSHMDIDYVCFTGSTDVGRLVMQAAAASNLKQVSLEL 182
+P GV+N+V G G +G + +H +D + FTGST+VGR V AAA L +LEL
Sbjct: 188 DV-LPKGVVNIVTGKGSKSGEYLLNHPGLDKLAFTGSTEVGRDVAIAAA-KKLIPATLEL 245
Query: 183 GGKSPLLIFDDADLDTAADVALLGNLYNKGEICVASSRVFVQEGIYDKFEKKLLEKAKAW 242
GGKS +IFDDA+ D A + A LG L+N+G++C A SR+FVQEGIYD+F KL EK +
Sbjct: 246 GGKSANIIFDDANWDKALEGAQLGILFNQGQVCCAGSRIFVQEGIYDEFVAKLKEKFENV 305
Query: 243 LVGDPFDPTVRQGPQISERHFDRILSYIEHGKREGATLLTGGKPIG----DKGYYIEPTI 298
VG+P DP + G Q+++ D+ILSY++ K EGA +LTGG + DKG++IEPT+
Sbjct: 306 KVGNPLDPDTQMGAQVNKDQLDKILSYVDIAKEEGAKILTGGHRLTENGLDKGFFIEPTL 365
Query: 299 FTNVKEDMIIAKEEIFGPVMALMKFKTVEEAIKSANNTQYGLAAGIVTKDLNVANTVSRS 358
NV DM +A+EEIFGPV ++KFKT +E I AN+++YGL G+ TKD+N A V+R+
Sbjct: 366 IVNVTNDMRVAQEEIFGPVATVIKFKTEDEVIDMANDSEYGLGGGVFTKDINRALRVARA 425
Query: 359 IRAGIIWINCYFGFSMDCPYGGYKMSGFGREYGLESLYKYLQIKSV 404
+ G +W+N Y P+GGYK SG GRE L Y Q+K++
Sbjct: 426 VETGRVWVNTYNQIPAGAPFGGYKKSGIGRETHKSMLDAYTQMKNI 471
|
Uncharacterized aldehyde dehydrogenase from Staphylococcus aureus (AldA1, locus SACOL0154) and other similar sequences are present in this CD. Length = 475 |
| >gnl|CDD|143415 cd07097, ALDH_KGSADH-YcbD, Bacillus subtilis NADP+-dependent alpha-ketoglutaric semialdehyde dehydrogenase ycbD-like | Back alignment and domain information |
|---|
Score = 406 bits (1046), Expect = e-139
Identities = 180/409 (44%), Positives = 252/409 (61%), Gaps = 7/409 (1%)
Query: 1 MWKFADLIEEHVEELAALDALDAGKVYLRAKTAEIPGAAEFLRFFAGAADKIHGEVLKMS 60
+ K D +E EELA L + GK L E+ A + R++AG A ++ GE L +
Sbjct: 65 LDKAGDELEARKEELARLLTREEGKT-LPEARGEVTRAGQIFRYYAGEALRLSGETLPST 123
Query: 61 -SELQGYTLREPVGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLTALYYAH 119
++ T REP+GVVG I PWNFP + K++PALA G T++ KPAE TP +A
Sbjct: 124 RPGVEVETTREPLGVVGLITPWNFPIAIPAWKIAPALAYGNTVVFKPAELTPASAWALVE 183
Query: 120 LAKLAGIPDGVLNVVPGFGPTAGAAICSHMDIDYVCFTGSTDVGRLVMQAAAASNLKQVS 179
+ + AG+P GV N+V G G G A+ H D+D V FTGST VGR + AAAA+ +V
Sbjct: 184 ILEEAGLPAGVFNLVMGSGSEVGQALVEHPDVDAVSFTGSTAVGRRI-AAAAAARGARVQ 242
Query: 180 LELGGKSPLLIFDDADLDTAADVALLGNLYNKGEICVASSRVFVQEGIYDKFEKKLLEKA 239
LE+GGK+PL++ DDADLD A + A+ G ++ G+ C ASSR+ V EGI+D+F + L+E+
Sbjct: 243 LEMGGKNPLVVLDDADLDLAVECAVQGAFFSTGQRCTASSRLIVTEGIHDRFVEALVERT 302
Query: 240 KAWLVGDPFDPTVRQGPQISERHFDRILSYIEHGKREGATLLTGGKPI--GDKGYYIEPT 297
KA VGD D V GP +SER ++ L YIE + EGA L+ GG+ + D+GYY+ P
Sbjct: 303 KALKVGDALDEGVDIGPVVSERQLEKDLRYIEIARSEGAKLVYGGERLKRPDEGYYLAPA 362
Query: 298 IFTNVKEDMIIAKEEIFGPVMALMKFKTVEEAIKSANNTQYGLAAGIVTKDLNVANTVSR 357
+F V DM IA+EEIFGPV A+++ + +EA+ AN+T++GL+AGIVT L A R
Sbjct: 363 LFAGVTNDMRIAREEIFGPVAAVIRVRDYDEALAIANDTEFGLSAGIVTTSLKHATHFKR 422
Query: 358 SIRAGIIWINC-YFGFSMDCPYGGYKMSGFG-REYGLESLYKYLQIKSV 404
+ AG++ +N G P+GG K S +G RE G +L Y IK+V
Sbjct: 423 RVEAGVVMVNLPTAGVDYHVPFGGRKGSSYGPREQGEAALEFYTTIKTV 471
|
Kinetic studies of the Bacillus subtilis ALDH-like ycbD protein, which is involved in d-glucarate/d-galactarate utilization, reveal that it is a NADP+-dependent, alpha-ketoglutaric semialdehyde dehydrogenase (KGSADH). KGSADHs (EC 1.2.1.26) catalyze the NAD(P)+-dependent conversion of KGSA to alpha-ketoglutarate. Interestingly, the NADP+-dependent, tetrameric, 2,5-dioxopentanoate dehydrogenase (EC=1.2.1.26), an enzyme involved in the catabolic pathway for D-arabinose in Sulfolobus solfataricus, also clusters in this group. This CD shows a distant phylogenetic relationship to the Azospirillum brasilense KGSADH-II (-III) group. Length = 473 |
| >gnl|CDD|143407 cd07088, ALDH_LactADH-AldA, Escherichia coli lactaldehyde dehydrogenase AldA-like | Back alignment and domain information |
|---|
Score = 403 bits (1039), Expect = e-138
Identities = 174/407 (42%), Positives = 255/407 (62%), Gaps = 8/407 (1%)
Query: 3 KFADLIEEHVEELAALDALDAGKVYLRAKTAEIPGAAEFLRFFAGAADKIHGEVLKMSSE 62
K ADLI E+ +ELA L + GK A+ E+ A+++ + A A +I GE+ + S+
Sbjct: 65 KLADLIRENADELAKLIVEEQGKTLSLARV-EVEFTADYIDYMAEWARRIEGEI--IPSD 121
Query: 63 LQGYTL---REPVGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLTALYYAH 119
+ + P+GVV I+PWNFP + K++PAL G T+++KP+E+TPL AL +A
Sbjct: 122 RPNENIFIFKVPIGVVAGILPWNFPFFLIARKLAPALVTGNTIVIKPSEETPLNALEFAE 181
Query: 120 LAKLAGIPDGVLNVVPGFGPTAGAAICSHMDIDYVCFTGSTDVGRLVMQAAAASNLKQVS 179
L AG+P GVLN+V G G G A+ +H + + TGST+ G+ +M+AAA N+ +VS
Sbjct: 182 LVDEAGLPAGVLNIVTGRGSVVGDALVAHPKVGMISLTGSTEAGQKIMEAAAE-NITKVS 240
Query: 180 LELGGKSPLLIFDDADLDTAADVALLGNLYNKGEICVASSRVFVQEGIYDKFEKKLLEKA 239
LELGGK+P ++ DADLD A + + N G++C + RV+V E IYD+F +KL+EK
Sbjct: 241 LELGGKAPAIVMKDADLDLAVKAIVDSRIINCGQVCTCAERVYVHEDIYDEFMEKLVEKM 300
Query: 240 KAWLVGDPFDPTVRQGPQISERHFDRILSYIEHGKREGATLLTGGK-PIGDKGYYIEPTI 298
KA VGDPFD GP ++E D++ +E GATLLTGGK P G+KGY+ EPT+
Sbjct: 301 KAVKVGDPFDAATDMGPLVNEAALDKVEEMVERAVEAGATLLTGGKRPEGEKGYFYEPTV 360
Query: 299 FTNVKEDMIIAKEEIFGPVMALMKFKTVEEAIKSANNTQYGLAAGIVTKDLNVANTVSRS 358
TNV++DM I +EEIFGPV+ ++KF +++EAI+ AN+++YGL + I T++LN A +
Sbjct: 361 LTNVRQDMEIVQEEIFGPVLPVVKFSSLDEAIELANDSEYGLTSYIYTENLNTAMRATNE 420
Query: 359 IRAGIIWINCYFGFSMDCPYGGYKMSGFGREYGLESLYKYLQIKSVV 405
+ G +IN +M + G+K SG G G L +YLQ K V
Sbjct: 421 LEFGETYINRENFEAMQGFHAGWKKSGLGGADGKHGLEEYLQTKVVY 467
|
Lactaldehyde dehydrogenase from Escherichia coli (AldA, LactADH, EC=1.2.1.22), an NAD(+)-dependent enzyme involved in the metabolism of L-fucose and L-rhamnose, and other similar sequences are present in this CD. Length = 468 |
| >gnl|CDD|215157 PLN02278, PLN02278, succinic semialdehyde dehydrogenase | Back alignment and domain information |
|---|
Score = 396 bits (1019), Expect = e-135
Identities = 185/405 (45%), Positives = 254/405 (62%), Gaps = 3/405 (0%)
Query: 1 MWKFADLIEEHVEELAALDALDAGKVYLRAKTAEIPGAAEFLRFFAGAADKIHGEVLKMS 60
+ ++ DLI + E+LA L L+ GK A E+ A FL +FA A +++G+++
Sbjct: 90 LRRWYDLIIANKEDLAQLMTLEQGKPLKEAI-GEVAYGASFLEYFAEEAKRVYGDIIPSP 148
Query: 61 S-ELQGYTLREPVGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLTALYYAH 119
+ + L++PVGVVG I PWNFP M KV PALAAGCT++VKP+E TPLTAL A
Sbjct: 149 FPDRRLLVLKQPVGVVGAITPWNFPLAMITRKVGPALAAGCTVVVKPSELTPLTALAAAE 208
Query: 120 LAKLAGIPDGVLNVVPGFGPTAGAAICSHMDIDYVCFTGSTDVGRLVMQAAAASNLKQVS 179
LA AGIP GVLNVV G P G A+ + + + FTGST VG+ +M A AA+ +K+VS
Sbjct: 209 LALQAGIPPGVLNVVMGDAPEIGDALLASPKVRKITFTGSTAVGKKLM-AGAAATVKRVS 267
Query: 180 LELGGKSPLLIFDDADLDTAADVALLGNLYNKGEICVASSRVFVQEGIYDKFEKKLLEKA 239
LELGG +P ++FDDADLD A AL N G+ CV ++R+ VQEGIYDKF + +
Sbjct: 268 LELGGNAPFIVFDDADLDVAVKGALASKFRNSGQTCVCANRILVQEGIYDKFAEAFSKAV 327
Query: 240 KAWLVGDPFDPTVRQGPQISERHFDRILSYIEHGKREGATLLTGGKPIGDKGYYIEPTIF 299
+ +VGD F+ V QGP I+E ++ S+++ +GA +L GGK G + EPT+
Sbjct: 328 QKLVVGDGFEEGVTQGPLINEAAVQKVESHVQDAVSKGAKVLLGGKRHSLGGTFYEPTVL 387
Query: 300 TNVKEDMIIAKEEIFGPVMALMKFKTVEEAIKSANNTQYGLAAGIVTKDLNVANTVSRSI 359
+V EDM+I +EE+FGPV L +FKT EEAI AN+T+ GLAA I T+DL A VS ++
Sbjct: 388 GDVTEDMLIFREEVFGPVAPLTRFKTEEEAIAIANDTEAGLAAYIFTRDLQRAWRVSEAL 447
Query: 360 RAGIIWINCYFGFSMDCPYGGYKMSGFGREYGLESLYKYLQIKSV 404
GI+ +N + P+GG K SG GRE + +YL+IK V
Sbjct: 448 EYGIVGVNEGLISTEVAPFGGVKQSGLGREGSKYGIDEYLEIKYV 492
|
Length = 498 |
| >gnl|CDD|131352 TIGR02299, HpaE, 5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase | Back alignment and domain information |
|---|
Score = 393 bits (1012), Expect = e-134
Identities = 183/414 (44%), Positives = 255/414 (61%), Gaps = 11/414 (2%)
Query: 3 KFADLIEEHVEELAALDALDAGKVYLRAKTAEIPGAAEFLRFFAG-AADKIHGEVLKMSS 61
K ADLIE+H +E+A L+ LD G+ R ++ AAE RFFA + + G + +
Sbjct: 68 KIADLIEQHADEIAVLECLDCGQPL-RQTRQQVIRAAENFRFFADKCEEAMDGRTYPVDT 126
Query: 62 ELQGYTLREPVGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLTALYYAHLA 121
L YT+R PVG VG I PWN P + K++PALA G T+++KPAE +PLTA A +A
Sbjct: 127 HLN-YTVRVPVGPVGLITPWNAPFMLSTWKIAPALAFGNTVVLKPAEWSPLTAARLAEIA 185
Query: 122 KLAGIPDGVLNVVPGFGPTAGAAICSHMDIDYVCFTGSTDVGRLVMQAAAASNLKQVSLE 181
K AG+PDGV N+V GFG AG A+ +H D+ V FTG T G ++M+ A + LK+ S+E
Sbjct: 186 KEAGLPDGVFNLVHGFGEEAGKALVAHPDVKAVSFTGETATGSIIMRNGADT-LKRFSME 244
Query: 182 LGGKSPLLIFDDADLDTAADVALLGNLYNKGEICVASSRVFVQEGIYDKFEKKLLEKAKA 241
LGGKSP+++FDDADL+ A D + GE C ASSR+ VQE I + F +KL+E+ +A
Sbjct: 245 LGGKSPVIVFDDADLERALDAVVFMIFSFNGERCTASSRLLVQESIAEDFVEKLVERVRA 304
Query: 242 WLVGDPFDPTVRQGPQISERHFDRILSYIEHGKREGATLLTGGKPIGD-------KGYYI 294
VG P DP GP I H ++L Y+E ++EGAT+L GG+ +G Y+
Sbjct: 305 IRVGHPLDPETEVGPLIHPEHLAKVLGYVEAAEKEGATILVGGERAPTFRGEDLGRGNYV 364
Query: 295 EPTIFTNVKEDMIIAKEEIFGPVMALMKFKTVEEAIKSANNTQYGLAAGIVTKDLNVANT 354
PT+FT M IA+EEIFGPV+ ++ FK EEAI+ AN+T+YGLA + T D+ A+
Sbjct: 365 LPTVFTGADNHMRIAQEEIFGPVLTVIPFKDEEEAIEKANDTRYGLAGYVWTNDVGRAHR 424
Query: 355 VSRSIRAGIIWINCYFGFSMDCPYGGYKMSGFGREYGLESLYKYLQIKSVVTPI 408
V+ ++ AG+IW+N + P+GG K SG GRE G S Y + K+V +
Sbjct: 425 VALALEAGMIWVNSQNVRHLPTPFGGVKASGIGREGGTYSFDFYTETKNVALAL 478
|
This model represents the dehydrogenase responsible for the conversion of 5-carboxymethyl-2-hydroxymuconate semialdehyde to 5-carboxymethyl-2-hydroxymuconate (a tricarboxylic acid). This is the step in the degradation of 4-hydroxyphenylacetic acid via homoprotocatechuate following the oxidative opening of the aromatic ring. Length = 488 |
| >gnl|CDD|143424 cd07106, ALDH_AldA-AAD23400, Streptomyces aureofaciens putative aldehyde dehydrogenase AldA (AAD23400)-like | Back alignment and domain information |
|---|
Score = 390 bits (1004), Expect = e-133
Identities = 164/402 (40%), Positives = 234/402 (58%), Gaps = 6/402 (1%)
Query: 3 KFADLIEEHVEELAALDALDAGKVYLRAKTAEIPGAAEFLRFFAGAADKIHGEVLKMSSE 62
AD IE + EELA L L+ GK L E+ GA +LR+ A EV++
Sbjct: 49 AIADAIEANAEELARLLTLEQGKP-LAEAQFEVGGAVAWLRYTASLDLPD--EVIEDDDT 105
Query: 63 LQGYTLREPVGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLTALYYAHLAK 122
+ R+P+GVV I+PWNFP + K++PAL AG T+++KP+ TPL L LA+
Sbjct: 106 RRVELRRKPLGVVAAIVPWNFPLLLAAWKIAPALLAGNTVVLKPSPFTPLCTLKLGELAQ 165
Query: 123 LAGIPDGVLNVVPGFGPTAGAAICSHMDIDYVCFTGSTDVGRLVMQAAAASNLKQVSLEL 182
+P GVLNVV G G G A+ SH DI + FTGST G+ VM A+AA LK+V+LEL
Sbjct: 166 EV-LPPGVLNVVSG-GDELGPALTSHPDIRKISFTGSTATGKKVM-ASAAKTLKRVTLEL 222
Query: 183 GGKSPLLIFDDADLDTAADVALLGNLYNKGEICVASSRVFVQEGIYDKFEKKLLEKAKAW 242
GG ++ D D+D A G N G++C A R++V E IYD+F + L+ AKA
Sbjct: 223 GGNDAAIVLPDVDIDAVAPKLFWGAFINSGQVCAAIKRLYVHESIYDEFCEALVALAKAA 282
Query: 243 LVGDPFDPTVRQGPQISERHFDRILSYIEHGKREGATLLTGGKPIGDKGYYIEPTIFTNV 302
+VGD DP GP ++ +D++ +E K +GA +L GG+P+ GY+I PTI +
Sbjct: 283 VVGDGLDPGTTLGPVQNKMQYDKVKELVEDAKAKGAKVLAGGEPLDGPGYFIPPTIVDDP 342
Query: 303 KEDMIIAKEEIFGPVMALMKFKTVEEAIKSANNTQYGLAAGIVTKDLNVANTVSRSIRAG 362
E I EE FGPV+ ++K+ +E I AN+++YGL A + + DL A V+R + AG
Sbjct: 343 PEGSRIVDEEQFGPVLPVLKYSDEDEVIARANDSEYGLGASVWSSDLERAEAVARRLEAG 402
Query: 363 IIWINCYFGFSMDCPYGGYKMSGFGREYGLESLYKYLQIKSV 404
+WIN + D P+GG+K SG G E+G+E L +Y Q + +
Sbjct: 403 TVWINTHGALDPDAPFGGHKQSGIGVEFGIEGLKEYTQTQVI 444
|
Putative aldehyde dehydrogenase, AldA, from Streptomyces aureofaciens (locus AAD23400) and other similar sequences are present in this CD. Length = 446 |
| >gnl|CDD|182108 PRK09847, PRK09847, gamma-glutamyl-gamma-aminobutyraldehyde dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 391 bits (1005), Expect = e-133
Identities = 180/403 (44%), Positives = 262/403 (65%), Gaps = 3/403 (0%)
Query: 3 KFADLIEEHVEELAALDALDAGKVYLRAKTAEIPGAAEFLRFFAGAADKIHGEVLKMSSE 62
K ADL+E H EELA L+ LD GK + +IPGAA +R++A A DK++GEV SS
Sbjct: 89 KLADLMEAHAEELALLETLDTGKPIRHSLRDDIPGAARAIRWYAEAIDKVYGEVATTSSH 148
Query: 63 LQGYTLREPVGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLTALYYAHLAK 122
+REPVGV+ I+PWNFP + K+ PALAAG ++I+KP+E++PL+A+ A LAK
Sbjct: 149 ELAMIVREPVGVIAAIVPWNFPLLLTCWKLGPALAAGNSVILKPSEKSPLSAIRLAGLAK 208
Query: 123 LAGIPDGVLNVVPGFGPTAGAAICSHMDIDYVCFTGSTDVGRLVMQAAAASNLKQVSLEL 182
AG+PDGVLNVV GFG AG A+ H DID + FTGST G+ +++ A SN+K+V LE
Sbjct: 209 EAGLPDGVLNVVTGFGHEAGQALSRHNDIDAIAFTGSTRTGKQLLKDAGDSNMKRVWLEA 268
Query: 183 GGKSPLLIFDDA-DLDTAADVALLGNLYNKGEICVASSRVFVQEGIYDKFEKKLLEKAKA 241
GGKS ++F D DL AA G YN+G++C+A +R+ ++E I D+F L ++A+
Sbjct: 269 GGKSANIVFADCPDLQQAASATAAGIFYNQGQVCIAGTRLLLEESIADEFLALLKQQAQN 328
Query: 242 WLVGDPFDPTVRQGPQISERHFDRILSYIEHGKREGATLLTGGKPIGDKGYYIEPTIFTN 301
W G P DP G I H D + S+I G+ +G LL G+ G I PTIF +
Sbjct: 329 WQPGHPLDPATTMGTLIDCAHADSVHSFIREGESKG-QLLLDGRNAGLAA-AIGPTIFVD 386
Query: 302 VKEDMIIAKEEIFGPVMALMKFKTVEEAIKSANNTQYGLAAGIVTKDLNVANTVSRSIRA 361
V + +++EEIFGPV+ + +F + E+A++ AN++QYGL A + T+DL+ A+ +SR ++A
Sbjct: 387 VDPNASLSREEIFGPVLVVTRFTSEEQALQLANDSQYGLGAAVWTRDLSRAHRMSRRLKA 446
Query: 362 GIIWINCYFGFSMDCPYGGYKMSGFGREYGLESLYKYLQIKSV 404
G +++N Y M P+GGYK SG GR+ L +L K+ ++K++
Sbjct: 447 GSVFVNNYNDGDMTVPFGGYKQSGNGRDKSLHALEKFTELKTI 489
|
Length = 494 |
| >gnl|CDD|143425 cd07107, ALDH_PhdK-like, Nocardioides 2-carboxybenzaldehyde dehydrogenase, PhdK-like | Back alignment and domain information |
|---|
Score = 387 bits (996), Expect = e-132
Identities = 180/409 (44%), Positives = 252/409 (61%), Gaps = 14/409 (3%)
Query: 4 FADLIEEHVEELAALDALDAGKVYLRAKTAEIPGAAEFLRFFAGAADKIHGEVLKMSSEL 63
A + EH EELA +DALD G A ++ AA L +FAG ++ GE + +
Sbjct: 50 LATRLREHAEELALIDALDCGNPV-SAMLGDVMVAAALLDYFAGLVTELKGETIPVGGRN 108
Query: 64 QGYTLREPVGVVGHIIPWNFPTTMFFM-KVSPALAAGCTMIVKPAEQTPLTALYYAHLAK 122
YTLREP GVV I+ +N P MF K++ LAAG T++VKP EQ PL+AL LA+
Sbjct: 109 LHYTLREPYGVVARIVAFNHPL-MFAAAKIAAPLAAGNTVVVKPPEQAPLSAL---RLAE 164
Query: 123 LAG--IPDGVLNVVPGFGPTAGAAICSHMDIDYVCFTGSTDVGRLVMQAAAASNLKQVSL 180
LA +P GV N++PG G TAGAA+ H D+ + GS GR +M+AAA +K V+L
Sbjct: 165 LAREVLPPGVFNILPGDGATAGAALVRHPDVKRIALIGSVPTGRAIMRAAAEG-IKHVTL 223
Query: 181 ELGGKSPLLIFDDADLDTAADVALLG-NLYNKGEICVASSRVFVQEGIYDKFEKKLLEKA 239
ELGGK+ L++F DAD + AAD A+ G N G+ C ++SR+FV E IYD+ +++E+
Sbjct: 224 ELGGKNALIVFPDADPEAAADAAVAGMNFTWCGQSCGSTSRLFVHESIYDEVLARVVERV 283
Query: 240 KAWLVGDPFDPTVRQGPQISERHFDRILSYIEHGKREGATLLTGGK----PIGDKGYYIE 295
A VGDP DP GP +S + +DR++ YI+ KREGA L+TGG P + G+Y+E
Sbjct: 284 AAIKVGDPTDPATTMGPLVSRQQYDRVMHYIDSAKREGARLVTGGGRPEGPALEGGFYVE 343
Query: 296 PTIFTNVKEDMIIAKEEIFGPVMALMKFKTVEEAIKSANNTQYGLAAGIVTKDLNVANTV 355
PT+F +V M IA+EEIFGPV+++++++ E + AN +YGL A I T D++ A+
Sbjct: 344 PTVFADVTPGMRIAREEIFGPVLSVLRWRDEAEMVAQANGVEYGLTAAIWTNDISQAHRT 403
Query: 356 SRSIRAGIIWINCYFGFSMDCPYGGYKMSGFGREYGLESLYKYLQIKSV 404
+R + AG +WIN + P+GG K SG GRE LE L Y Q K+V
Sbjct: 404 ARRVEAGYVWINGSSRHFLGAPFGGVKNSGIGREECLEELLSYTQEKNV 452
|
Nocardioides sp. strain KP72-carboxybenzaldehyde dehydrogenase (PhdK), an enzyme involved in phenanthrene degradation, and other similar sequences, are present in this CD. Length = 456 |
| >gnl|CDD|143422 cd07104, ALDH_BenzADH-like, ALDH subfamily: NAD(P)+-dependent benzaldehyde dehydrogenase II, vanillin dehydrogenase, p-hydroxybenzaldehyde dehydrogenase and related proteins | Back alignment and domain information |
|---|
Score = 383 bits (987), Expect = e-131
Identities = 166/403 (41%), Positives = 241/403 (59%), Gaps = 18/403 (4%)
Query: 1 MWKFADLIEEHVEELAALDALDAGKVYLRAKTAEIPGAAEFLRFFAGAADKIHGEVLKMS 60
+ K A+++EE +E+A ++G +A E+ A LR AG + GE+L
Sbjct: 28 LRKAAEILEERRDEIADWLIRESGSTRPKA-AFEVGAAIAILREAAGLPRRPEGEIL--P 84
Query: 61 SELQG---YTLREPVGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLT-ALY 116
S++ G R P+GVVG I P+NFP + V+PALA G +++KP +TP+T L
Sbjct: 85 SDVPGKESMVRRVPLGVVGVISPFNFPLILAMRSVAPALALGNAVVLKPDSRTPVTGGLL 144
Query: 117 YAHLAKLAGIPDGVLNVVPGFGPTAGAAICSHMDIDYVCFTGSTDVGRLVMQAAAASNLK 176
A + + AG+P GVLNVVPG G G A+ H + + FTGST VGR + + A +LK
Sbjct: 145 IAEIFEEAGLPKGVLNVVPGGGSEIGDALVEHPRVRMISFTGSTAVGRHIGELAGR-HLK 203
Query: 177 QVSLELGGKSPLLIFDDADLDTAADVALLGNLYNKGEICVASSRVFVQEGIYDKFEKKLL 236
+V+LELGG +PL++ DDADLD A A G ++G+IC+A+ R+ V E +YD+F +KL+
Sbjct: 204 KVALELGGNNPLIVLDDADLDLAVSAAAFGAFLHQGQICMAAGRILVHESVYDEFVEKLV 263
Query: 237 EKAKAWLVGDPFDPTVRQGPQISERHFDRILSYIEHGKREGATLLTGGKPIGDKGYYIEP 296
KAKA VGDP DP GP I+ER DR+ + +E GA LLTGG +G + +P
Sbjct: 264 AKAKALPVGDPRDPDTVIGPLINERQVDRVHAIVEDAVAAGARLLTGGTY---EGLFYQP 320
Query: 297 TIFTNVKEDMIIAKEEIFGPVMALMKFKTVEEAIKSANNTQYGLAAGIVTKDLNVANTVS 356
T+ ++V DM I +EEIFGPV ++ F EEA++ AN+T+YGL+A + T+DL A +
Sbjct: 321 TVLSDVTPDMPIFREEIFGPVAPVIPFDDDEEAVELANDTEYGLSAAVFTRDLERAMAFA 380
Query: 357 RSIRAGIIWINCYFGFSMDC----PYGGYKMSGFGREYGLESL 395
+ G++ IN +++ P+GG K SG GR G SL
Sbjct: 381 ERLETGMVHINDQ---TVNDEPHVPFGGVKASGGGRFGGPASL 420
|
ALDH subfamily which includes the NAD(P)+-dependent, benzaldehyde dehydrogenase II (XylC, BenzADH, EC=1.2.1.28) involved in the oxidation of benzyl alcohol to benzoate; p-hydroxybenzaldehyde dehydrogenase (PchA, HBenzADH) which catalyzes the oxidation of p-hydroxybenzaldehyde to p-hydroxybenzoic acid; vanillin dehydrogenase (Vdh, VaniDH) involved in the metabolism of ferulic acid as seen in Pseudomonas putida KT2440; and other related sequences. Length = 431 |
| >gnl|CDD|143426 cd07108, ALDH_MGR_2402, Magnetospirillum NAD(P)+-dependent aldehyde dehydrogenase MSR-1-like | Back alignment and domain information |
|---|
Score = 381 bits (981), Expect = e-130
Identities = 175/408 (42%), Positives = 245/408 (60%), Gaps = 9/408 (2%)
Query: 5 ADLIEEHVEELAALDALDAGKVYLRAKTAEIPGAAEFLRFFAGAADKIHGEVLKMSSELQ 64
AD +E EELA L AL+ G E A+ R+F G A ++ GE L ++
Sbjct: 51 ADALEARSEELARLLALETGNALRTQARPEAAVLADLFRYFGGLAGELKGETLPFGPDVL 110
Query: 65 GYTLREPVGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLTALYYAHLAKLA 124
YT+REP+GVVG I+PWN P + +K++PAL AG T+++K AE PL L A +
Sbjct: 111 TYTVREPLGVVGAILPWNAPLMLAALKIAPALVAGNTVVLKAAEDAPLAVLLLAEILA-Q 169
Query: 125 GIPDGVLNVVPGFGPTAGAAICSHMDIDYVCFTGSTDVGRLVMQAAAASNLKQVSLELGG 184
+P GVLNV+ G+G GAA+ H D+D V FTGST+VG+++ + AAA L VSLELGG
Sbjct: 170 VLPAGVLNVITGYGEECGAALVDHPDVDKVTFTGSTEVGKIIYR-AAADRLIPVSLELGG 228
Query: 185 KSPLLIFDDADLDTAADVALLGNLYNK-GEICVASSRVFVQEGIYDKFEKKLLEKAKAWL 243
KSP+++F DADLD A D A+ G + + G+ C A SR+FV E IYD F +KL+ K
Sbjct: 229 KSPMIVFPDADLDDAVDGAIAGMRFTRQGQSCTAGSRLFVHEDIYDAFLEKLVAKLSKLK 288
Query: 244 VGDPFDPTVRQGPQISERHFDRILSYIEHGKRE-GATLLTGGKPIGD----KGYYIEPTI 298
+GDP D G ISE+ F ++ YI+ G GAT+L GG G+ G++++PTI
Sbjct: 289 IGDPLDEATDIGAIISEKQFAKVCGYIDLGLSTSGATVLRGGPLPGEGPLADGFFVQPTI 348
Query: 299 FTNVKEDMIIAKEEIFGPVMALMKFKTVEEAIKSANNTQYGLAAGIVTKDLNVANTVSRS 358
F+ V + +A+EEIFGPV+ + +K +E I AN++ YGLAA + T+DL A + +
Sbjct: 349 FSGVDNEWRLAREEIFGPVLCAIPWKDEDEVIAMANDSHYGLAAYVWTRDLGRALRAAHA 408
Query: 359 IRAGIIWINCYFGFSMDCPYGGYKMSGFGREYGLES-LYKYLQIKSVV 405
+ AG + +N G YGG+K SG GRE LE L + Q K+V
Sbjct: 409 LEAGWVQVNQGGGQQPGQSYGGFKQSGLGREASLEGMLEHFTQKKTVN 456
|
NAD(P)+-dependent aldehyde dehydrogenase of Magnetospirillum gryphiswaldense MSR-1 (MGR_2402) , and other similar sequences, are present in this CD. Length = 457 |
| >gnl|CDD|188167 TIGR01780, SSADH, succinate-semialdehyde dehydrogenase | Back alignment and domain information |
|---|
Score = 376 bits (968), Expect = e-128
Identities = 169/402 (42%), Positives = 250/402 (62%), Gaps = 4/402 (0%)
Query: 3 KFADLIEEHVEELAALDALDAGKVYLRAKTAEIPGAAEFLRFFAGAADKIHGEVLK-MSS 61
K+ +L+ E+ ++LA L L+ GK AK EI AA FL +FA A +++G+ + S
Sbjct: 49 KWYNLMMENKDDLARLITLENGKPLKEAK-GEILYAASFLEWFAEEAKRVYGDTIPSPQS 107
Query: 62 ELQGYTLREPVGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLTALYYAHLA 121
+ + +++PVGV I PWNFP M K ALAAGCT++VKPAEQTPL+AL A LA
Sbjct: 108 DKRLIVIKQPVGVCAAITPWNFPAAMITRKAGAALAAGCTVVVKPAEQTPLSALALARLA 167
Query: 122 KLAGIPDGVLNVVPG-FGPTAGAAICSHMDIDYVCFTGSTDVGRLVMQAAAASNLKQVSL 180
+ AGIP GVLNV+ G G + + + + FTGST+VG+++M +AS +K+VS+
Sbjct: 168 EQAGIPKGVLNVITGSRAKEVGNVLTTSPLVRKISFTGSTNVGKILM-KQSASTVKKVSM 226
Query: 181 ELGGKSPLLIFDDADLDTAADVALLGNLYNKGEICVASSRVFVQEGIYDKFEKKLLEKAK 240
ELGG +P ++FDDADLD A + A+ N G+ CV ++R++V +GIYD+F KKL E K
Sbjct: 227 ELGGNAPFIVFDDADLDQAVEGAMASKFRNAGQTCVCANRLYVHDGIYDEFAKKLAEAVK 286
Query: 241 AWLVGDPFDPTVRQGPQISERHFDRILSYIEHGKREGATLLTGGKPIGDKGYYIEPTIFT 300
VG+ D V QGP I+E+ +++ +I +GA ++TGGK G + EPT+ +
Sbjct: 287 KLKVGNGLDEGVTQGPLINEKAVEKVEKHIADAVEKGAKVVTGGKRHELGGNFFEPTVLS 346
Query: 301 NVKEDMIIAKEEIFGPVMALMKFKTVEEAIKSANNTQYGLAAGIVTKDLNVANTVSRSIR 360
NV DM+++KEE FGP+ + KF EE I AN+T+ GLAA ++DL+ V+ ++
Sbjct: 347 NVTADMLVSKEETFGPLAPVFKFDDEEEVIAIANDTEVGLAAYFFSRDLSRIWRVAEALE 406
Query: 361 AGIIWINCYFGFSMDCPYGGYKMSGFGREYGLESLYKYLQIK 402
G++ IN ++ P+GG K SG GRE + +YL+ K
Sbjct: 407 YGMVGINTGLISNVVAPFGGVKQSGLGREGSKYGIEEYLETK 448
|
Succinic semialdehyde dehydrogenase is one of three enzymes constituting 4-aminobutyrate (GABA) degradation in both prokaryotes and eukaryotes, catalyzing the (NAD(P)+)-dependent catabolism reaction of succinic semialdehyde to succinate for metabolism by the citric acid cycle. The EC number depends on the cofactor: 1.2.1.24 for NAD only, 1.2.1.79 for NADP only, and 1.2.1.16 if both can be used. In Escherichia coli, succinic semialdehyde dehydrogenase is located in an unidirectionally transcribed gene cluster encoding enzymes for GABA degradation and is suggested to be cotranscribed with succinic semialdehyde transaminase from a common promoter upstream of SSADH. Similar gene arrangements can be found in characterized Ralstonia eutropha and the genome analysis of Bacillus subtilis. Prokaryotic succinic semialdehyde dehydrogenases (1.2.1.16) share high sequence homology to characterized succinic semialdehyde dehydrogenases from rat and human (1.2.1.24), exhibiting conservation of proposed cofactor binding residues, and putative active sites (G-237 & G-242, C-293 & G-259 respectively of rat SSADH). Eukaryotic SSADH enzymes exclusively utilize NAD+ as a cofactor, exhibiting little to no NADP+ activity. While a NADP+ preference has been detected in prokaryotes in addition to both NADP+- and NAD+-dependencies as in E.coli, Pseudomonas, and Klebsiella pneumoniae. The function of this alternative SSADH currently is unknown, but has been suggested to play a possible role in 4-hydroxyphenylacetic degradation. Just outside the scope of this model, are several sequences belonging to clades scoring between trusted and noise. These sequences may be actual SSADH enzymes, but lack sufficiently close characterized homologs to make a definitive assignment at this time. SSADH enzyme belongs to the aldehyde dehydrogenase family (pfam00171), sharing a common evolutionary origin and enzymatic mechanism with lactaldehyde dehydrogenase. Like in lactaldehyde dehydrogenase and succinate semialdehyde dehydrogenase, the mammalian catalytic glutamic acid and cysteine residues are conserved in all the enzymes of this family (PS00687, PS00070) [Central intermediary metabolism, Other]. Length = 448 |
| >gnl|CDD|143395 cd06534, ALDH-SF, NAD(P)+-dependent aldehyde dehydrogenase superfamily | Back alignment and domain information |
|---|
Score = 371 bits (955), Expect = e-127
Identities = 168/405 (41%), Positives = 221/405 (54%), Gaps = 64/405 (15%)
Query: 3 KFADLIEEHVEELAALDALDAGKVYLRAKTAEIPGAAEFLRFFAGAADKIHGEVLK-MSS 61
K ADL+EE EELAAL+ L+ GK A E+ A + R+ AG ADK+ G L
Sbjct: 24 KIADLLEERREELAALETLETGKPIEEAL-GEVARAIDTFRYAAGLADKLGGPELPSPDP 82
Query: 62 ELQGYTLREPVGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLTALYYAHLA 121
+ Y REP+GVVG I PWNFP + K++PALAAG T+++KP+E TPLTAL A L
Sbjct: 83 GGEAYVRREPLGVVGVITPWNFPLLLAAWKLAPALAAGNTVVLKPSELTPLTALALAELL 142
Query: 122 KLAGIPDGVLNVVPGFGPTAGAAICSHMDIDYVCFTGSTDVGRLVMQAAAASNLKQVSLE 181
+ AG+P GV+NVVPG G GAA+ SH +D + FTGST VG+ +M AAA NLK V+LE
Sbjct: 143 QEAGLPPGVVNVVPGGGDEVGAALLSHPRVDKISFTGSTAVGKAIM-KAAAENLKPVTLE 201
Query: 182 LGGKSPLLIFDDADLDTAADVALLGNLYNKGEICVASSRVFVQEGIYDKFEKKLLEKAKA 241
LGGKSP+++ +DADLD A + A+ G +N G+IC A+SR+ V E IYD+F +EK
Sbjct: 202 LGGKSPVIVDEDADLDAAVEGAVFGAFFNAGQICTAASRLLVHESIYDEF----VEKLVT 257
Query: 242 WLVGDPFDPTVRQGPQISERHFDRILSYIEHGKREGATLLTGGKPIGDKGYYIEPTIFTN 301
LV D + Q E F +L I F +
Sbjct: 258 VLVDVDPDMPIAQ-----EEIFGPVLPVIR---------------------------FKD 285
Query: 302 VKEDMIIAKEEIFGPVMALMKFKTVEEAIKSANNTQYGLAAGIVTKDLNVANTVSRSIRA 361
+E AI AN+T+YGL AG+ T+DLN A V+ +RA
Sbjct: 286 EEE------------------------AIALANDTEYGLTAGVFTRDLNRALRVAERLRA 321
Query: 362 GIIWINCYFGFSMD-CPYGGYKMSGFGREYGLESLYKYLQIKSVV 405
G ++IN P+GG K SG GRE G L +Y + K+VV
Sbjct: 322 GTVYINDSSIGVGPEAPFGGVKNSGIGREGGPYGLEEYTRTKTVV 366
|
The aldehyde dehydrogenase superfamily (ALDH-SF) of NAD(P)+-dependent enzymes, in general, oxidize a wide range of endogenous and exogenous aliphatic and aromatic aldehydes to their corresponding carboxylic acids and play an important role in detoxification. Besides aldehyde detoxification, many ALDH isozymes possess multiple additional catalytic and non-catalytic functions such as participating in metabolic pathways, or as binding proteins, or osmoregulants, to mention a few. The enzyme has three domains, a NAD(P)+ cofactor-binding domain, a catalytic domain, and a bridging domain; and the active enzyme is generally either homodimeric or homotetrameric. The catalytic mechanism is proposed to involve cofactor binding, resulting in a conformational change and activation of an invariant catalytic cysteine nucleophile. The cysteine and aldehyde substrate form an oxyanion thiohemiacetal intermediate resulting in hydride transfer to the cofactor and formation of a thioacylenzyme intermediate. Hydrolysis of the thioacylenzyme and release of the carboxylic acid product occurs, and in most cases, the reduced cofactor dissociates from the enzyme. The evolutionary phylogenetic tree of ALDHs appears to have an initial bifurcation between what has been characterized as the classical aldehyde dehydrogenases, the ALDH family (ALDH) and extended family members or aldehyde dehydrogenase-like (ALDH-L) proteins. The ALDH proteins are represented by enzymes which share a number of highly conserved residues necessary for catalysis and cofactor binding and they include such proteins as retinal dehydrogenase, 10-formyltetrahydrofolate dehydrogenase, non-phosphorylating glyceraldehyde 3-phosphate dehydrogenase, delta(1)-pyrroline-5-carboxylate dehydrogenases, alpha-ketoglutaric semialdehyde dehydrogenase, alpha-aminoadipic semialdehyde dehydrogenase, coniferyl aldehyde dehydrogenase and succinate-semialdehyde dehydrogenase. Included in this larger group are all human, Arabidopsis, Tortula, fungal, protozoan, and Drosophila ALDHs identified in families ALDH1 through ALDH22 with the exception of families ALDH18, ALDH19, and ALDH20 which are present in the ALDH-like group. The ALDH-like group is represented by such proteins as gamma-glutamyl phosphate reductase, LuxC-like acyl-CoA reductase, and coenzyme A acylating aldehyde dehydrogenase. All of these proteins have a conserved cysteine that aligns with the catalytic cysteine of the ALDH group. Length = 367 |
| >gnl|CDD|143429 cd07111, ALDH_F16, Aldehyde dehydrogenase family 16A1-like | Back alignment and domain information |
|---|
Score = 373 bits (959), Expect = e-126
Identities = 172/399 (43%), Positives = 251/399 (62%), Gaps = 12/399 (3%)
Query: 1 MWKFADLIEEHVEELAALDALDAGKVYLRAKTAEIPGAAEFLRFFAGAADKIHGEVLKMS 60
+++ A I++H A L++LD GK ++ +IP A AG A +
Sbjct: 87 LYRIARHIQKHQRLFAVLESLDNGKPIRESRDCDIPLVARHFYHHAGWAQL-------LD 139
Query: 61 SELQGYTLREPVGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLTALYYAHL 120
+EL G+ +PVGVVG I+PWNFP M K+ PALA G T+++KPAE TPLTAL +A +
Sbjct: 140 TELAGW---KPVGVVGQIVPWNFPLLMLAWKICPALAMGNTVVLKPAEYTPLTALLFAEI 196
Query: 121 AKLAGIPDGVLNVVPGFGPTAGAAICSHMDIDYVCFTGSTDVGRLVMQAAAASNLKQVSL 180
AG+P GVLN+V G + G+A+ +H +D V FTGST+VGR + +A A + K++SL
Sbjct: 197 CAEAGLPPGVLNIVTG-NGSFGSALANHPGVDKVAFTGSTEVGRALRRATAGTG-KKLSL 254
Query: 181 ELGGKSPLLIFDDADLDTAADVALLGNLYNKGEICVASSRVFVQEGIYDKFEKKLLEKAK 240
ELGGKSP ++FDDADLD+A + + +N+G++C A SR+ VQE + ++ +KL E+
Sbjct: 255 ELGGKSPFIVFDDADLDSAVEGIVDAIWFNQGQVCCAGSRLLVQESVAEELIRKLKERMS 314
Query: 241 AWLVGDPFDPTVRQGPQISERHFDRILSYIEHGKREGATLLTGGKPIGDKGYYIEPTIFT 300
VGDP D + G + RI +E G+ EGA + G + KG + PT+FT
Sbjct: 315 HLRVGDPLDKAIDMGAIVDPAQLKRIRELVEEGRAEGADVFQPGADLPSKGPFYPPTLFT 374
Query: 301 NVKEDMIIAKEEIFGPVMALMKFKTVEEAIKSANNTQYGLAAGIVTKDLNVANTVSRSIR 360
NV IA+EEIFGPV+ ++ F+T +EA+ ANNT YGLAA + +++L++A V+ S++
Sbjct: 375 NVPPASRIAQEEIFGPVLVVLTFRTAKEAVALANNTPYGLAASVWSENLSLALEVALSLK 434
Query: 361 AGIIWINCYFGFSMDCPYGGYKMSGFGREYGLESLYKYL 399
AG++WIN + F +GGY+ SGFGRE G E LY+YL
Sbjct: 435 AGVVWINGHNLFDAAAGFGGYRESGFGREGGKEGLYEYL 473
|
Uncharacterized aldehyde dehydrogenase family 16 member A1 (ALDH16A1) and other related sequences are present in this CD. The active site cysteine and glutamate residues are not conserved in the human ALDH16A1 protein sequence. Length = 480 |
| >gnl|CDD|143449 cd07131, ALDH_AldH-CAJ73105, Uncharacterized Candidatus kuenenia aldehyde dehydrogenase AldH (CAJ73105)-like | Back alignment and domain information |
|---|
Score = 372 bits (958), Expect = e-126
Identities = 177/413 (42%), Positives = 257/413 (62%), Gaps = 13/413 (3%)
Query: 1 MWKFADLIEEHVEELAALDALDAGKVYLRAKTAEIPGAAEFLRFFAGAADKIHGEVLKMS 60
+++ A+L+++ EELA L + GK + ++ A + ++ AG ++ GE +
Sbjct: 65 LFRAAELLKKRKEELARLVTREMGKPLAEGR-GDVQEAIDMAQYAAGEGRRLFGETV--P 121
Query: 61 SEL---QGYTLREPVGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLTALYY 117
SEL T R+P+GVV I PWNFP + K+ PAL G T++ KPAE TP AL
Sbjct: 122 SELPNKDAMTRRQPIGVVALITPWNFPVAIPSWKIFPALVCGNTVVFKPAEDTPACALKL 181
Query: 118 AHLAKLAGIPDGVLNVVPGFGPTAGAAICSHMDIDYVCFTGSTDVGRLVMQAAAASNLKQ 177
L AG+P GV+NVV G G G A+ H D+D V FTGST+VG + + A N K+
Sbjct: 182 VELFAEAGLPPGVVNVVHGRGEEVGEALVEHPDVDVVSFTGSTEVGERIGETCARPN-KR 240
Query: 178 VSLELGGKSPLLIFDDADLDTAADVALLGNLYNKGEICVASSRVFVQEGIYDKFEKKLLE 237
V+LE+GGK+P+++ DDADLD A + AL G+ C A+SR+ V E +YD+F K+ +E
Sbjct: 241 VALEMGGKNPIIVMDDADLDLALEGALWSAFGTTGQRCTATSRLIVHESVYDEFLKRFVE 300
Query: 238 KAKAWLVGDPFDPTVRQGPQISERHFDRILSYIEHGKREGATLLTGGKPI----GDKGYY 293
+AK VGD D GP I+E +++L+Y E GK EGATLL GG+ + +KGY+
Sbjct: 301 RAKRLRVGDGLDEETDMGPLINEAQLEKVLNYNEIGKEEGATLLLGGERLTGGGYEKGYF 360
Query: 294 IEPTIFTNVKEDMIIAKEEIFGPVMALMKFKTVEEAIKSANNTQYGLAAGIVTKDLNVAN 353
+EPT+FT+V DM IA+EEIFGPV+AL++ ++EEAI+ AN+T+YGL++ I T+D+N A
Sbjct: 361 VEPTVFTDVTPDMRIAQEEIFGPVVALIEVSSLEEAIEIANDTEYGLSSAIYTEDVNKAF 420
Query: 354 TVSRSIRAGIIWINC-YFGFSMDCPYGGYKMSGFG-REYGLESLYKYLQIKSV 404
R + AGI ++N G + P+GG K SG G RE G +L + + K+V
Sbjct: 421 RARRDLEAGITYVNAPTIGAEVHLPFGGVKKSGNGHREAGTTALDAFTEWKAV 473
|
Uncharacterized aldehyde dehydrogenase of Candidatus kuenenia AldH (locus CAJ73105) and similar sequences with similarity to alpha-aminoadipic semialdehyde dehydrogenase (AASADH, human ALDH7A1, EC=1.2.1.31), Arabidopsis ALDH7B4, and Streptomyces clavuligerus delta-1-piperideine-6-carboxylate dehydrogenase (P6CDH) are included in this CD. Length = 478 |
| >gnl|CDD|143467 cd07149, ALDH_y4uC, Uncharacterized ALDH (y4uC) with similarity to Tortula ruralis aldehyde dehydrogenase ALDH21A1 | Back alignment and domain information |
|---|
Score = 370 bits (951), Expect = e-125
Identities = 169/412 (41%), Positives = 237/412 (57%), Gaps = 19/412 (4%)
Query: 3 KFADLIEEHVEELAALDALDAGKVYLRAKTAEIPGAAEFLRFFAGAADKIHGEVLKMSS- 61
+ A L+EE EE A AL+AGK ++ E+ A E LR A A ++ GE + +
Sbjct: 51 RAAQLLEERREEFARTIALEAGKP-IKDARKEVDRAIETLRLSAEEAKRLAGETIPFDAS 109
Query: 62 ----ELQGYTLREPVGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLTALYY 117
G+T+REP+GVV I P+NFP + KV PA+AAG +++KPA QTPL+AL
Sbjct: 110 PGGEGRIGFTIREPIGVVAAITPFNFPLNLVAHKVGPAIAAGNAVVLKPASQTPLSALKL 169
Query: 118 AHLAKLAGIPDGVLNVVPGFGPTAGAAICSHMDIDYVCFTGSTDVGRLVMQAAAASNLKQ 177
A L AG+P G LNVV G G T G A+ + + + FTGS VG + + A LK+
Sbjct: 170 AELLLEAGLPKGALNVVTGSGETVGDALVTDPRVRMISFTGSPAVGEAIARKAG---LKK 226
Query: 178 VSLELGGKSPLLIFDDADLDTAADVALLGNLYNKGEICVASSRVFVQEGIYDKFEKKLLE 237
V+LELG + +++ DADL+ A + + G N G++C++ R+FV E IYD+F ++ +
Sbjct: 227 VTLELGSNAAVIVDADADLEKAVERCVSGAFANAGQVCISVQRIFVHEDIYDEFLERFVA 286
Query: 238 KAKAWLVGDPFDPTVRQGPQISERHFDRILSYIEHGKREGATLLTGGKPIGDKGYYIEPT 297
K +VGDP D GP ISE +RI ++E GA LLTGGK G +EPT
Sbjct: 287 ATKKLVVGDPLDEDTDVGPMISEAEAERIEEWVEEAVEGGARLLTGGKRDGA---ILEPT 343
Query: 298 IFTNVKEDMIIAKEEIFGPVMALMKFKTVEEAIKSANNTQYGLAAGIVTKDLNVANTVSR 357
+ T+V DM + EE+F PV++L F T++EAI AN++ YGL AG+ T DL A +R
Sbjct: 344 VLTDVPPDMKVVCEEVFAPVVSLNPFDTLDEAIAMANDSPYGLQAGVFTNDLQKALKAAR 403
Query: 358 SIRAGIIWINCYFGFSMD-CPYGGYKMSGFGRE---YGLESLYKYLQIKSVV 405
+ G + IN F +D PYGG K SG GRE Y +E + +IK V
Sbjct: 404 ELEVGGVMINDSSTFRVDHMPYGGVKESGTGREGPRYAIE---EMTEIKLVC 452
|
Uncharacterized aldehyde dehydrogenase (ORF name y4uC) with sequence similarity to the moss Tortula ruralis aldehyde dehydrogenase ALDH21A1 (RNP123) believed to play an important role in the detoxification of aldehydes generated in response to desiccation- and salinity-stress, and similar sequences are included in this CD. Length = 453 |
| >gnl|CDD|143434 cd07116, ALDH_ACDHII-AcoD, Ralstonia eutrophus NAD+-dependent acetaldehyde dehydrogenase II-like | Back alignment and domain information |
|---|
Score = 364 bits (936), Expect = e-123
Identities = 182/416 (43%), Positives = 240/416 (57%), Gaps = 18/416 (4%)
Query: 3 KFADLIEEHVEELAALDALDAGKVYLRAKTAEIPGAAEFLRFFAGAADKIHGEVLKMSSE 62
K AD +E ++E LA + D GK A+IP A + R+FAG G + ++
Sbjct: 68 KIADRMEANLEMLAVAETWDNGKPVRETLAADIPLAIDHFRYFAGCIRAQEGSISEIDEN 127
Query: 63 LQGYTLREPVGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLTALYYAHLAK 122
Y EP+GVVG IIPWNFP M K++PALAAG +++KPAEQTP + L L +
Sbjct: 128 TVAYHFHEPLGVVGQIIPWNFPLLMATWKLAPALAAGNCVVLKPAEQTPASILV---LME 184
Query: 123 LAG--IPDGVLNVVPGFGPTAGAAICSHMDIDYVCFTGSTDVGRLVMQAAAASNLKQVSL 180
L G +P GV+NVV GFG AG + S I V FTG T GRL+MQ A+ N+ V+L
Sbjct: 185 LIGDLLPPGVVNVVNGFGLEAGKPLASSKRIAKVAFTGETTTGRLIMQYAS-ENIIPVTL 243
Query: 181 ELGGKSPLLIFDD--ADLDTAADVALLGNL---YNKGEICVASSRVFVQEGIYDKFEKKL 235
ELGGKSP + F D D D AL G + N+GE+C SR +QE IYD+F ++
Sbjct: 244 ELGGKSPNIFFADVMDADDAFFDKALEGFVMFALNQGEVCTCPSRALIQESIYDRFMERA 303
Query: 236 LEKAKAWLVGDPFDPTVRQGPQISERHFDRILSYIEHGKREGATLLTGGK-----PIGDK 290
LE+ KA G+P D G Q S ++ILSYI+ GK EGA +LTGG+ +
Sbjct: 304 LERVKAIKQGNPLDTETMIGAQASLEQLEKILSYIDIGKEEGAEVLTGGERNELGGLLGG 363
Query: 291 GYYIEPTIFTNVKEDMIIAKEEIFGPVMALMKFKTVEEAIKSANNTQYGLAAGIVTKDLN 350
GYY+ T K M I +EEIFGPV+A+ FK EEA++ AN+T YGL AG+ T+D N
Sbjct: 364 GYYVPTTFKGGNK--MRIFQEEIFGPVLAVTTFKDEEEALEIANDTLYGLGAGVWTRDGN 421
Query: 351 VANTVSRSIRAGIIWINCYFGFSMDCPYGGYKMSGFGREYGLESLYKYLQIKSVVT 406
A + R I+AG +W NCY + +GGYK SG GRE L Y Q K+++
Sbjct: 422 TAYRMGRGIQAGRVWTNCYHLYPAHAAFGGYKQSGIGRENHKMMLDHYQQTKNLLV 477
|
Included in this CD is the NAD+-dependent, acetaldehyde dehydrogenase II (AcDHII, AcoD, EC=1.2.1.3) from Ralstonia (Alcaligenes) eutrophus H16 involved in the catabolism of acetoin and ethanol, and similar proteins, such as, the dimeric dihydrolipoamide dehydrogenase of the acetoin dehydrogenase enzyme system of Klebsiella pneumonia. Also included are sequences similar to the NAD+-dependent chloroacetaldehyde dehydrogenases (AldA and AldB) of Xanthobacter autotrophicus GJ10 which are involved in the degradation of 1,2-dichloroethane. These proteins apparently require RpoN factors for expression. Length = 479 |
| >gnl|CDD|143431 cd07113, ALDH_PADH_NahF, Escherichia coli NAD+-dependent phenylacetaldehyde dehydrogenase PadA-like | Back alignment and domain information |
|---|
Score = 361 bits (928), Expect = e-122
Identities = 166/408 (40%), Positives = 242/408 (59%), Gaps = 8/408 (1%)
Query: 3 KFADLIEEHVEELAALDALDAGKVYLRAKTAEIPGAAEFLRFFAGAADKIHGEVLKMS-- 60
+ ADLIE+H EELA L+ L +GK ++ E+ +A FLR+FAG A KI+GE L S
Sbjct: 68 RLADLIEQHGEELAQLETLCSGKSIHLSRAFEVGQSANFLRYFAGWATKINGETLAPSIP 127
Query: 61 ----SELQGYTLREPVGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLTALY 116
+T REPVGVV I+PWNF + K+ ALA GCT+++KP+E TPLT L
Sbjct: 128 SMQGERYTAFTRREPVGVVAGIVPWNFSVMIAVWKIGAALATGCTIVIKPSEFTPLTLLR 187
Query: 117 YAHLAKLAGIPDGVLNVVPGFGPTAGAAICSHMDIDYVCFTGSTDVGRLVMQAAAASNLK 176
A LAK AGIPDGVLNVV G G GA + SH D+ V FTGS G+ + AAS+L
Sbjct: 188 VAELAKEAGIPDGVLNVVNGKGAV-GAQLISHPDVAKVSFTGSVATGKKI-GRQAASDLT 245
Query: 177 QVSLELGGKSPLLIFDDADLDTAADVALLGNLYNKGEICVASSRVFVQEGIYDKFEKKLL 236
+V+LELGGK+ DAD+D + L ++G++C A R +V +D+ KL
Sbjct: 246 RVTLELGGKNAAAFLKDADIDWVVEGLLTAGFLHQGQVCAAPERFYVHRSKFDELVTKLK 305
Query: 237 EKAKAWLVGDPFDPTVRQGPQISERHFDRILSYIEHGKREGATLLTGGKPIGDKGYYIEP 296
+ ++ VG P D +V GP ++ HFD++ SY++ + EG ++ GG+ + +GY+++P
Sbjct: 306 QALSSFQVGSPMDESVMFGPLANQPHFDKVCSYLDDARAEGDEIVRGGEALAGEGYFVQP 365
Query: 297 TIFTNVKEDMIIAKEEIFGPVMALMKFKTVEEAIKSANNTQYGLAAGIVTKDLNVANTVS 356
T+ D + +EE FGPV++ + ++ EE I+ N+T +GL A + T +L+ A
Sbjct: 366 TLVLARSADSRLMREETFGPVVSFVPYEDEEELIQLINDTPFGLTASVWTNNLSKALRYI 425
Query: 357 RSIRAGIIWINCYFGFSMDCPYGGYKMSGFGREYGLESLYKYLQIKSV 404
I AG +W+N + P+GG K SG GRE+G + Y ++KSV
Sbjct: 426 PRIEAGTVWVNMHTFLDPAVPFGGMKQSGIGREFGSAFIDDYTELKSV 473
|
NAD+-dependent, homodimeric, phenylacetaldehyde dehydrogenase (PADH, EC=1.2.1.39) PadA of Escherichia coli involved in the catabolism of 2-phenylethylamine, and other related sequences, are present in this CD. Also included is the Pseudomonas fluorescens ST StyD PADH involved in styrene catabolism, the Sphingomonas sp. LB126 FldD protein involved in fluorene degradation, and the Novosphingobium aromaticivorans NahF salicylaldehyde dehydrogenase involved in the NAD+-dependent conversion of salicylaldehyde to salicylate. Length = 477 |
| >gnl|CDD|143468 cd07150, ALDH_VaniDH_like, Pseudomonas putida vanillin dehydrogenase-like | Back alignment and domain information |
|---|
Score = 356 bits (916), Expect = e-120
Identities = 162/402 (40%), Positives = 239/402 (59%), Gaps = 17/402 (4%)
Query: 1 MWKFADLIEEHVEELAALDALDAGKVYLRAKTAEIPGAAEFLRFFAGAADKIHGEVLKMS 60
+ K A+++E ++L L + G Y +A E E LR AG ++ GE L
Sbjct: 49 LLKAAEIMERRADDLIDLLIDEGGSTYGKA-WFETTFTPELLRAAAGECRRVRGETLP-- 105
Query: 61 SELQG---YTLREPVGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLTALYY 117
S+ G ++R P+GVV I P+N+P + KV+ ALAAG T+++KP+E+TP+ L
Sbjct: 106 SDSPGTVSMSVRRPLGVVAGITPFNYPLILATKKVAFALAAGNTVVLKPSEETPVIGLKI 165
Query: 118 AHLAKLAGIPDGVLNVVPGFGPTAGAAICSHMDIDYVCFTGSTDVGRLVMQAAAASNLKQ 177
A + + AG+P GV NVV G G G + + V FTGST VGR + + A +LK+
Sbjct: 166 AEIMEEAGLPKGVFNVVTGGGAEVGDELVDDPRVRMVTFTGSTAVGREIAEKAGR-HLKK 224
Query: 178 VSLELGGKSPLLIFDDADLDTAADVALLGNLYNKGEICVASSRVFVQEGIYDKFEKKLLE 237
++LELGGK+PL++ DADLD A A G ++G+IC+++SR+ V+E +YD+F KK +
Sbjct: 225 ITLELGGKNPLIVLADADLDYAVRAAAFGAFMHQGQICMSASRIIVEEPVYDEFVKKFVA 284
Query: 238 KAKAWLVGDPFDPTVRQGPQISERHFDRILSYIEHGKREGATLLTGGKPIGDKGYYIEPT 297
+A VGDP DP GP IS R +RI +E +GA LLTGGK G + +PT
Sbjct: 285 RASKLKVGDPRDPDTVIGPLISPRQVERIKRQVEDAVAKGAKLLTGGK---YDGNFYQPT 341
Query: 298 IFTNVKEDMIIAKEEIFGPVMALMKFKTVEEAIKSANNTQYGLAAGIVTKDLNVANTVSR 357
+ T+V DM I +EE FGPV +++ K EEA++ AN+T+YGL+A I+T DL A ++
Sbjct: 342 VLTDVTPDMRIFREETFGPVTSVIPAKDAEEALELANDTEYGLSAAILTNDLQRAFKLAE 401
Query: 358 SIRAGIIWINCYFGFSMD----CPYGGYKMSGFGREYGLESL 395
+ +G++ IN ++ P+GG K SGFGRE G S+
Sbjct: 402 RLESGMVHINDP---TILDEAHVPFGGVKASGFGREGGEWSM 440
|
Vanillin dehydrogenase (Vdh, VaniDH) involved in the metabolism of ferulic acid and other related sequences are included in this CD. The E. coli vanillin dehydrogenase (LigV) preferred NAD+ to NADP+ and exhibited a broad substrate preference, including vanillin, benzaldehyde, protocatechualdehyde, m-anisaldehyde, and p-hydroxybenzaldehyde. Length = 451 |
| >gnl|CDD|143438 cd07120, ALDH_PsfA-ACA09737, Pseudomonas putida aldehyde dehydrogenase PsfA (ACA09737)-like | Back alignment and domain information |
|---|
Score = 353 bits (908), Expect = e-119
Identities = 162/407 (39%), Positives = 225/407 (55%), Gaps = 6/407 (1%)
Query: 3 KFADLIEEHVEELAALDALDAGKVYLRAKTAEIPGAAEFLRFFAGAADKIHGEVLKMSSE 62
+ AD E + E LA L AL+ GK+ A+ EI GA LR++AG A G +++
Sbjct: 50 ELADAFEANAERLARLLALENGKILGEAR-FEISGAISELRYYAGLARTEAGRMIEPEPG 108
Query: 63 LQGYTLREPVGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLTALYYA-HLA 121
LREP+GV G I+PWN P + ++PALAAGCT++VKPA QT LA
Sbjct: 109 SFSLVLREPMGVAGIIVPWNSPVVLLVRSLAPALAAGCTVVVKPAGQTAQINAAIIRILA 168
Query: 122 KLAGIPDGVLNVVPGFGPTAGAAICSHMDIDYVCFTGSTDVGRLVMQAAAASNLKQVSLE 181
++ +P GV+N+ G A + + D+D + FTGST GR +M AAAA LK++ LE
Sbjct: 169 EIPSLPAGVVNLFTESGSEGAAHLVASPDVDVISFTGSTATGRAIM-AAAAPTLKRLGLE 227
Query: 182 LGGKSPLLIFDDADLDTAADVALLGNLYNKGEICVASSRVFVQEGIYDKFEKKLLEKAKA 241
LGGK+P ++FDDADLD A G+ C+A SRV VQ I D+ +L + A
Sbjct: 228 LGGKTPCIVFDDADLDAALPKLERALTIFAGQFCMAGSRVLVQRSIADEVRDRLAARLAA 287
Query: 242 WLVGDPFDPTVRQGPQISERHFDRILSYIEHGKREGAT-LLTGGKPIGD--KGYYIEPTI 298
VG DP GP I + DR+ +E GA +L GG KG ++ PT+
Sbjct: 288 VKVGPGLDPASDMGPLIDRANVDRVDRMVERAIAAGAEVVLRGGPVTEGLAKGAFLRPTL 347
Query: 299 FTNVKEDMIIAKEEIFGPVMALMKFKTVEEAIKSANNTQYGLAAGIVTKDLNVANTVSRS 358
D I +EEIFGPV+ L F EA+ AN+T YGLAA + T+DL A V+R+
Sbjct: 348 LEVDDPDADIVQEEIFGPVLTLETFDDEAEAVALANDTDYGLAASVWTRDLARAMRVARA 407
Query: 359 IRAGIIWINCYFGFSMDCPYGGYKMSGFGREYGLESLYKYLQIKSVV 405
IRAG +WIN + + GGY+ SG GR +G+ +L +++ K +
Sbjct: 408 IRAGTVWINDWNKLFAEAEEGGYRQSGLGRLHGVAALEDFIEYKHIY 454
|
Included in this CD is the aldehyde dehydrogenase (PsfA, locus ACA09737) of Pseudomonas putida involved in furoic acid metabolism. Transcription of psfA was induced in response to 2-furoic acid, furfuryl alcohol, and furfural. Length = 455 |
| >gnl|CDD|132260 TIGR03216, OH_muco_semi_DH, 2-hydroxymuconic semialdehyde dehydrogenase | Back alignment and domain information |
|---|
Score = 354 bits (909), Expect = e-119
Identities = 165/415 (39%), Positives = 235/415 (56%), Gaps = 13/415 (3%)
Query: 1 MWKFADLIEEHVEELAALDALDAGKVYLRAKTAEIP-GAAEFLRFFAGAADKIHGEVLKM 59
++ AD IE ++ A + D GK A +IP GAA F R FA E +M
Sbjct: 65 LYAVADEIERRFDDFLAAEVADTGKPRSLASHLDIPRGAANF-RVFADVVKNAPTECFEM 123
Query: 60 S----SELQGYTLREPVGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLTAL 115
+ Y +R+P+GVVG I PWN P + KV PALA G T++VKP+E+TP TA
Sbjct: 124 ATPDGKGALNYAVRKPLGVVGVISPWNLPLLLMTWKVGPALACGNTVVVKPSEETPGTAT 183
Query: 116 YYAHLAKLAGIPDGVLNVVPGFGP-TAGAAICSHMDIDYVCFTGSTDVGRLVMQAAAASN 174
+ G+P GV NVV GFGP +AG + H +D + FTG T G +M+AAA
Sbjct: 184 LLGEVMNAVGVPKGVYNVVHGFGPDSAGEFLTRHPGVDAITFTGETRTGSAIMKAAA-DG 242
Query: 175 LKQVSLELGGKSPLLIFDDADLDTAADVALLGNLYNKGEICVASSRVFVQEGIYDKFEKK 234
+K VS ELGGK+ ++F D D D A L N G++C+ + RV+V+ I+D+F
Sbjct: 243 VKPVSFELGGKNAAIVFADCDFDAAVAGILRSAFLNTGQVCLGTERVYVERPIFDRFVAA 302
Query: 235 LLEKAKAWLVGDPFDPTVRQGPQISERHFDRILSYIEHGKREGATLLTGG-----KPIGD 289
L +A++ +G P DP GP IS H D++LSY EGAT++TGG
Sbjct: 303 LKARAESLKIGVPDDPATNMGPLISAEHRDKVLSYYALAVEEGATVVTGGGVPDFGDALA 362
Query: 290 KGYYIEPTIFTNVKEDMIIAKEEIFGPVMALMKFKTVEEAIKSANNTQYGLAAGIVTKDL 349
G +++PTI+T + + + EEIFGP + F + EE I AN+T YGLAA + T+DL
Sbjct: 363 GGAWVQPTIWTGLPDSARVVTEEIFGPCCHIAPFDSEEEVIALANDTPYGLAASVWTEDL 422
Query: 350 NVANTVSRSIRAGIIWINCYFGFSMDCPYGGYKMSGFGREYGLESLYKYLQIKSV 404
+ A+ V+R + GI+W+N +F + P+GG K+SG GRE G+ SL Y ++ +V
Sbjct: 423 SRAHRVARQMEVGIVWVNSWFLRDLRTPFGGSKLSGIGREGGVHSLEFYTELTNV 477
|
Members of this protein family are 2-hydroxymuconic semialdehyde dehydrogenase. Many aromatic compounds are catabolized by way of the catechol, via the meta-cleavage pathway, to pyruvate and acetyl-CoA. This enzyme performs the second of seven steps in that pathway for catechol degradation [Energy metabolism, Other]. Length = 481 |
| >gnl|CDD|143417 cd07099, ALDH_DDALDH, Methylomonas sp | Back alignment and domain information |
|---|
Score = 348 bits (895), Expect = e-117
Identities = 150/410 (36%), Positives = 219/410 (53%), Gaps = 10/410 (2%)
Query: 3 KFADLIEEHVEELAALDALDAGKVYLRAKTAEIPGAAEFLRFFAGAADKIHG-EVLKMSS 61
++ + +H +ELA L + GK A E+ A E + + A A ++ +
Sbjct: 48 RWKRALADHADELAELLHAETGKPRADA-GLEVLLALEAIDWAARNAPRVLAPRKVPTGL 106
Query: 62 ELQGYTLR---EPVGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLTALYYA 118
+ P GVVG I PWN+P + PALAAG +++KP+E TPL A
Sbjct: 107 LMPNKKATVEYRPYGVVGVISPWNYPLLTPMGDIIPALAAGNAVVLKPSEVTPLVGELLA 166
Query: 119 HLAKLAGIPDGVLNVVPGFGPTAGAAICSHMDIDYVCFTGSTDVGRLVMQAAAASNLKQV 178
AG P GVL VV G G T GAA+ +D V FTGS GR VM AAAA L V
Sbjct: 167 EAWAAAGPPQGVLQVVTGDGAT-GAALIDAG-VDKVAFTGSVATGRKVM-AAAAERLIPV 223
Query: 179 SLELGGKSPLLIFDDADLDTAADVALLGNLYNKGEICVASSRVFVQEGIYDKFEKKLLEK 238
LELGGK P+++ DADL+ AA A+ G + N G+ C++ RV+V E +YD+F +L+ K
Sbjct: 224 VLELGGKDPMIVLADADLERAAAAAVWGAMVNAGQTCISVERVYVHESVYDEFVARLVAK 283
Query: 239 AKAWLVGDPFDPTVRQGPQISERHFDRILSYIEHGKREGATLLTGGKPIGDKGYYIEPTI 298
A+A G GP + R D + +++ +GA LTGG G + EPT+
Sbjct: 284 ARALRPGADDIGDADIGPMTTARQLDIVRRHVDDAVAKGAKALTGGARSNGGGPFYEPTV 343
Query: 299 FTNVKEDMIIAKEEIFGPVMALMKFKTVEEAIKSANNTQYGLAAGIVTKDLNVANTVSRS 358
T+V DM + +EE FGPV+ +M +EAI AN+++YGL+A + ++DL A ++R
Sbjct: 344 LTDVPHDMDVMREETFGPVLPVMPVADEDEAIALANDSRYGLSASVFSRDLARAEAIARR 403
Query: 359 IRAGIIWINCYFGFSM--DCPYGGYKMSGFGREYGLESLYKYLQIKSVVT 406
+ AG + IN + P+GG K SG GR +G E L ++ + K++
Sbjct: 404 LEAGAVSINDVLLTAGIPALPFGGVKDSGGGRRHGAEGLREFCRPKAIAR 453
|
4,4'-diapolycopene-dialdehyde dehydrogenase-like. The 4,4'-diapolycopene-dialdehyde dehydrogenase (DDALDH) involved in C30 carotenoid synthesis in Methylomonas sp. strain 16a and other similar sequences are present in this CD. DDALDH converts 4,4'-diapolycopene-dialdehyde into 4,4'-diapolycopene-diacid. Length = 453 |
| >gnl|CDD|143463 cd07145, ALDH_LactADH_F420-Bios, Methanocaldococcus jannaschii NAD+-dependent lactaldehyde dehydrogenase-like | Back alignment and domain information |
|---|
Score = 348 bits (895), Expect = e-117
Identities = 162/409 (39%), Positives = 243/409 (59%), Gaps = 10/409 (2%)
Query: 3 KFADLIEEHVEELAALDALDAGKVYLRAKTAEIPGAAEFLRFFAGAADKIHGEVLKMSSE 62
K A+LIE EELA L ++ GK ++ E+ + A A + GE + + +
Sbjct: 51 KVAELIERRKEELAKLLTIEVGKP-IKQSRVEVERTIRLFKLAAEEAKVLRGETIPVDAY 109
Query: 63 LQG-----YTLREPVGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLTALYY 117
+T+REP+GVVG I P+NFP +F K++PA+A G +++VKP+ TPLTA+
Sbjct: 110 EYNERRIAFTVREPIGVVGAITPFNFPANLFAHKIAPAIAVGNSVVVKPSSNTPLTAIEL 169
Query: 118 AHLAKLAGIPDGVLNVVPGFGPTAGAAICSHMDIDYVCFTGSTDVGRLVMQAAAASNLKQ 177
A + + AG+P GV+NVV G+G G I ++ ++ + FTGST VG L+ + A K+
Sbjct: 170 AKILEEAGLPPGVINVVTGYGSEVGDEIVTNPKVNMISFTGSTAVGLLI-ASKAGGTGKK 228
Query: 178 VSLELGGKSPLLIFDDADLDTAADVALLGNLYNKGEICVASSRVFVQEGIYDKFEKKLLE 237
V+LELGG P+++ DADL+ A +A+ G N G++C A R+ V+E +YDKF K L+E
Sbjct: 229 VALELGGSDPMIVLKDADLERAVSIAVRGRFENAGQVCNAVKRILVEEEVYDKFLKLLVE 288
Query: 238 KAKAWLVGDPFDPTVRQGPQISERHFDRILSYIEHGKREGATLLTGGKPIGDKGYYIEPT 297
K K VGDP D + GP IS +R+ + + +G +L GGK D+G + PT
Sbjct: 289 KVKKLKVGDPLDESTDLGPLISPEAVERMENLVNDAVEKGGKILYGGK--RDEGSFFPPT 346
Query: 298 IFTNVKEDMIIAKEEIFGPVMALMKFKTVEEAIKSANNTQYGLAAGIVTKDLNVANTVSR 357
+ N DMI+ KEE+FGPV+ + K K EEA++ AN+T+YGL A + T D+N A V+R
Sbjct: 347 VLENDTPDMIVMKEEVFGPVLPIAKVKDDEEAVEIANSTEYGLQASVFTNDINRALKVAR 406
Query: 358 SIRAGIIWINCYFGFSMD-CPYGGYKMSGFGREYGLESLYKYLQIKSVV 405
+ AG + IN F D P+GG+K SG GRE ++ + + K++V
Sbjct: 407 ELEAGGVVINDSTRFRWDNLPFGGFKKSGIGREGVRYTMLEMTEEKTIV 455
|
NAD+-dependent, lactaldehyde dehydrogenase (EC=1.2.1.22) involved the biosynthesis of coenzyme F(420) in Methanocaldococcus jannaschii through the oxidation of lactaldehyde to lactate and generation of NAPH, and similar sequences are included in this CD. Length = 456 |
| >gnl|CDD|143418 cd07100, ALDH_SSADH1_GabD1, Mycobacterium tuberculosis succinate-semialdehyde dehydrogenase 1-like | Back alignment and domain information |
|---|
Score = 328 bits (843), Expect = e-109
Identities = 155/405 (38%), Positives = 214/405 (52%), Gaps = 5/405 (1%)
Query: 3 KFADLIEEHVEELAALDALDAGKVYLRAKTAEIPGAAEFLRFFA-GAADKIHGEVLKMSS 61
K ADL+ E +ELA L L+ GK A+ AE+ A R++A A + E ++ +
Sbjct: 29 KLADLLRERKDELARLITLEMGKPIAEAR-AEVEKCAWICRYYAENAEAFLADEPIE-TD 86
Query: 62 ELQGYTLREPVGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLTALYYAHLA 121
+ Y EP+GVV I+PWNFP F +P L AG T+++K A P AL L
Sbjct: 87 AGKAYVRYEPLGVVLGIMPWNFPFWQVFRFAAPNLMAGNTVLLKHASNVPGCALAIEELF 146
Query: 122 KLAGIPDGVLNVVPGFGPTAGAAICSHMDIDYVCFTGSTDVGRLVMQAAAASNLKQVSLE 181
+ AG P+GV + A I + + V TGS GR V A A NLK+ LE
Sbjct: 147 REAGFPEGVFQNLLIDSDQVEAII-ADPRVRGVTLTGSERAGRAV-AAEAGKNLKKSVLE 204
Query: 182 LGGKSPLLIFDDADLDTAADVALLGNLYNKGEICVASSRVFVQEGIYDKFEKKLLEKAKA 241
LGG P ++ DDADLD A A+ G L N G+ C+A+ R V E +YD+F +K +E A
Sbjct: 205 LGGSDPFIVLDDADLDKAVKTAVKGRLQNAGQSCIAAKRFIVHEDVYDEFLEKFVEAMAA 264
Query: 242 WLVGDPFDPTVRQGPQISERHFDRILSYIEHGKREGATLLTGGKPIGDKGYYIEPTIFTN 301
VGDP D GP + D + +E GATLL GGK G + PT+ T+
Sbjct: 265 LKVGDPMDEDTDLGPLARKDLRDELHEQVEEAVAAGATLLLGGKRPDGPGAFYPPTVLTD 324
Query: 302 VKEDMIIAKEEIFGPVMALMKFKTVEEAIKSANNTQYGLAAGIVTKDLNVANTVSRSIRA 361
V M EE+FGPV A++K K EEAI AN++ +GL + T DL A V+R + A
Sbjct: 325 VTPGMPAYDEELFGPVAAVIKVKDEEEAIALANDSPFGLGGSVFTTDLERAERVARRLEA 384
Query: 362 GIIWINCYFGFSMDCPYGGYKMSGFGREYGLESLYKYLQIKSVVT 406
G+++IN P+GG K SG+GRE G + +++ IK+V
Sbjct: 385 GMVFINGMVKSDPRLPFGGVKRSGYGRELGRFGIREFVNIKTVWV 429
|
Succinate-semialdehyde dehydrogenase 1 (SSADH1, GabD1, EC=1.2.1.16) catalyzes the NADP(+)-dependent oxidation of succinate semialdehyde (SSA) to succinate. SSADH activity in Mycobacterium tuberculosis (Mtb) is encoded by both gabD1 (Rv0234c) and gabD2 (Rv1731). The Mtb GabD1 SSADH1 reportedly is an enzyme of the gamma-aminobutyrate shunt, which forms a functional link between two TCA half-cycles by converting alpha-ketoglutarate to succinate. Length = 429 |
| >gnl|CDD|143405 cd07086, ALDH_F7_AASADH-like, NAD+-dependent alpha-aminoadipic semialdehyde dehydrogenase and related proteins | Back alignment and domain information |
|---|
Score = 327 bits (842), Expect = e-108
Identities = 139/416 (33%), Positives = 219/416 (52%), Gaps = 17/416 (4%)
Query: 1 MWKFADLIEEHVEELAALDALDAGKVYLRAKTAEIPGAAEFLRFFAGAADKIHGEVLKMS 60
+ + + + + E L L +L+ GK+ E+ + + G + ++G +
Sbjct: 63 VRQIGEALRKKKEALGRLVSLEMGKILPEGL-GEVQEMIDICDYAVGLSRMLYGLT--IP 119
Query: 61 SELQG---YTLREPVGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLTAL-- 115
SE G P+GVVG I +NFP + + AL G T++ KP+E TPLTA+
Sbjct: 120 SERPGHRLMEQWNPLGVVGVITAFNFPVAVPGWNAAIALVCGNTVVWKPSETTPLTAIAV 179
Query: 116 --YYAHLAKLAGIPDGVLNVVPGFGPTAGAAICSHMDIDYVCFTGSTDVGRLVMQAAAAS 173
A + + G+P GV+N+V G G G + + V FTGST+VGR V + A
Sbjct: 180 TKILAEVLEKNGLPPGVVNLVTGGGD-GGELLVHDPRVPLVSFTGSTEVGRRVGETVARR 238
Query: 174 NLKQVSLELGGKSPLLIFDDADLDTAADVALLGNLYNKGEICVASSRVFVQEGIYDKFEK 233
+V LELGG + +++ DDADLD A L + G+ C + R+ V E +YD+F +
Sbjct: 239 F-GRVLLELGGNNAIIVMDDADLDLAVRAVLFAAVGTAGQRCTTTRRLIVHESVYDEFLE 297
Query: 234 KLLEKAKAWLVGDPFDPTVRQGPQISERHFDRILSYIEHGKREGATLLTGGKPI--GDKG 291
+L++ K +GDP D GP I++ ++ L+ IE K +G T+LTGGK I G+ G
Sbjct: 298 RLVKAYKQVRIGDPLDEGTLVGPLINQAAVEKYLNAIEIAKSQGGTVLTGGKRIDGGEPG 357
Query: 292 YYIEPTIFTNVKEDMIIAKEEIFGPVMALMKFKTVEEAIKSANNTQYGLAAGIVTKDLNV 351
Y+EPTI T V +D I +EE F P++ ++KF ++EEAI N+ GL++ I T+DL
Sbjct: 358 NYVEPTIVTGVTDDARIVQEETFAPILYVIKFDSLEEAIAINNDVPQGLSSSIFTEDLRE 417
Query: 352 ANTVSR--SIRAGIIWINC-YFGFSMDCPYGGYKMSGFGREYGLESLYKYLQIKSV 404
A GI+ +N G + +GG K +G GRE G ++ +Y++ +
Sbjct: 418 AFRWLGPKGSDCGIVNVNIPTSGAEIGGAFGGEKETGGGRESGSDAWKQYMRRSTC 473
|
ALDH subfamily which includes the NAD+-dependent, alpha-aminoadipic semialdehyde dehydrogenase (AASADH, EC=1.2.1.31), also known as Antiquitin-1, ALDH7A1, ALDH7B or delta-1-piperideine-6-carboxylate dehydrogenase (P6CDH), and other similar sequences, such as the uncharacterized aldehyde dehydrogenase of Candidatus kuenenia AldH (locus CAJ73105). Length = 478 |
| >gnl|CDD|143442 cd07124, ALDH_PutA-P5CDH-RocA, Delta(1)-pyrroline-5-carboxylate dehydrogenase, RocA | Back alignment and domain information |
|---|
Score = 328 bits (843), Expect = e-108
Identities = 157/419 (37%), Positives = 237/419 (56%), Gaps = 26/419 (6%)
Query: 3 KFADLIEEHVEELAALDALDAGKVYLRAKTAEIPGAAEFLRFFAGAADKIHGEVLKMSS- 61
+ A L+ ELAA L+ GK + A A++ A +FL ++A ++ G ++M
Sbjct: 99 RAAALLRRRRFELAAWMVLEVGKNWAEA-DADVAEAIDFLEYYAREMLRLRGFPVEMVPG 157
Query: 62 ELQGYTLREPVGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLTALYYAHLA 121
E Y R P+GV I PWNFP + + AL G T+++KPAE TP+ A +
Sbjct: 158 EDNRYVYR-PLGVGAVISPWNFPLAILAGMTTAALVTGNTVVLKPAEDTPVIAAKLVEIL 216
Query: 122 KLAGIPDGVLNVVPGFGPTAGAAICSHMDIDYVCFTGSTDVGRLVMQAAA-----ASNLK 176
+ AG+P GV+N +PG G G + H D+ ++ FTGS +VG + + AA LK
Sbjct: 217 EEAGLPPGVVNFLPGPGEEVGDYLVEHPDVRFIAFTGSREVGLRIYERAAKVQPGQKWLK 276
Query: 177 QVSLELGGKSPLLIFDDADLDTAADVALLGNLYNKGEICVASSRVFVQEGIYDKFEKKLL 236
+V E+GGK+ +++ +DADLD AA+ + +G+ C A SRV V E +YD+F ++L+
Sbjct: 277 RVIAEMGGKNAIIVDEDADLDEAAEGIVRSAFGFQGQKCSACSRVIVHESVYDEFLERLV 336
Query: 237 EKAKAWLVGDPFDPTVRQGPQISERHFDRILSYIEHGKREGATLLTGGKPIGD--KGYYI 294
E+ KA VGDP DP V GP I + DRI YIE GK EG LL GG+ + +GY++
Sbjct: 337 ERTKALKVGDPEDPEVYMGPVIDKGARDRIRRYIEIGKSEG-RLLLGGEVLELAAEGYFV 395
Query: 295 EPTIFTNVKEDMIIAKEEIFGPVMALMKFKTVEEAIKSANNTQYGLAAGIVTKDLNVANT 354
+PTIF +V D +A+EEIFGPV+A++K K +EA++ AN+T+YGL G+ ++
Sbjct: 396 QPTIFADVPPDHRLAQEEIFGPVLAVIKAKDFDEALEIANDTEYGLTGGVFSRSPEHLER 455
Query: 355 VSRSIRAGIIWINCYFGFSMDC--------PYGGYKMSGFG-REYGLESLYKYLQIKSV 404
R G ++ N P+GG+KMSG G + G + L +++Q K+V
Sbjct: 456 ARREFEVGNLYAN------RKITGALVGRQPFGGFKMSGTGSKAGGPDYLLQFMQPKTV 508
|
Delta(1)-pyrroline-5-carboxylate dehydrogenase (EC=1.5.1.12 ), RocA: a proline catabolic enzyme of the aldehyde dehydrogenase (ALDH) protein superfamily. The proline catabolic enzymes, proline dehydrogenase and Delta(1)-pyrroline-5-carboxylate dehydrogenase (P5CDH), catalyze the two-step oxidation of proline to glutamate; P5CDH catalyzes the oxidation of glutamate semialdehyde, utilizing NAD+ as the electron acceptor. In some bacteria, the two enzymes are fused into the bifunctional flavoenzyme, proline utilization A (PutA). In this CD, monofunctional enzyme sequences such as seen in the Bacillus subtilis RocA P5CDH are also present. These enzymes play important roles in cellular redox control, superoxide generation, and apoptosis. Length = 512 |
| >gnl|CDD|143469 cd07151, ALDH_HBenzADH, NADP+-dependent p-hydroxybenzaldehyde dehydrogenase-like | Back alignment and domain information |
|---|
Score = 325 bits (836), Expect = e-108
Identities = 163/408 (39%), Positives = 232/408 (56%), Gaps = 29/408 (7%)
Query: 1 MWKFADLIEEHVEELAALDALDAGKVYLRAKTAEIPGAAEFLRFFAGAADKIHGEVLKMS 60
+ K A ++EE +E+ ++G ++A E A R A ++ G +L
Sbjct: 60 LEKAAQILEERRDEIVEWLIRESGSTRIKA-NIEWGAAMAITREAATFPLRMEGRIL--P 116
Query: 61 SELQG---YTLREPVGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLTA-LY 116
S++ G REP+GVVG I PWNFP + V+PALA G +++KPA TP+T L
Sbjct: 117 SDVPGKENRVYREPLGVVGVISPWNFPLHLSMRSVAPALALGNAVVLKPASDTPITGGLL 176
Query: 117 YAHLAKLAGIPDGVLNVVPGFGPTAGAAICSHMDIDYVCFTGSTDVGRLVMQAAAASNLK 176
A + + AG+P GVLNVV G G G A H + FTGST VGR + + A +LK
Sbjct: 177 LAKIFEEAGLPKGVLNVVVGAGSEIGDAFVEHPVPRLISFTGSTPVGRHIGELAGR-HLK 235
Query: 177 QVSLELGGKSPLLIFDDADLDTAADVALLGNLYNKGEICVASSRVFVQEGIYDKFEKKLL 236
+V+LELGG +P ++ +DAD+D A + A+ G ++G+IC+A +R+ V E +YD+F +K +
Sbjct: 236 KVALELGGNNPFVVLEDADIDAAVNAAVFGKFLHQGQICMAINRIIVHEDVYDEFVEKFV 295
Query: 237 EKAKAWLVGDPFDPTVRQGPQISERHFDRILSYIEHGKREGATLLTGGKPIGDKGYYIEP 296
E+ KA GDP DP GP I+E D +L IE EGATLL GG+ +G +EP
Sbjct: 296 ERVKALPYGDPSDPDTVVGPLINESQVDGLLDKIEQAVEEGATLLVGGEA---EGNVLEP 352
Query: 297 TIFTNVKEDMIIAKEEIFGPVMALMKFKTVEEAIKSANNTQYGLAAGIVTKDLNVANTVS 356
T+ ++V DM IA+EEIFGPV ++K EEA++ AN+T+YGL+ + T DL +
Sbjct: 353 TVLSDVTNDMEIAREEIFGPVAPIIKADDEEEALELANDTEYGLSGAVFTSDLERGVQFA 412
Query: 357 RSIRAGIIWINCYFGFSMD--------CPYGGYKMSGFGR---EYGLE 393
R I AG+ IN D P+GG K SG GR E+ LE
Sbjct: 413 RRIDAGMTHIN-------DQPVNDEPHVPFGGEKNSGLGRFNGEWALE 453
|
NADP+-dependent, p-hydroxybenzaldehyde dehydrogenase (PchA, HBenzADH) which catalyzes oxidation of p-hydroxybenzaldehyde to p-hydroxybenzoic acid and other related sequences are included in this CD. Length = 465 |
| >gnl|CDD|236501 PRK09407, gabD2, succinic semialdehyde dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Score = 322 bits (828), Expect = e-106
Identities = 159/418 (38%), Positives = 234/418 (55%), Gaps = 25/418 (5%)
Query: 3 KFADLIEEHVEELAALDALDAGKVYLRA--KTAEIPGAAEFLRFFAGAADKIHGE----- 55
+F DL+ E+ EEL L L+ GK A + ++ A R++A A K+
Sbjct: 84 RFHDLVLENREELLDLVQLETGKARRHAFEEVLDVALTA---RYYARRAPKLLAPRRRAG 140
Query: 56 ---VLKMSSELQGYTLREPVGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPL 112
VL ++EL R+P GVVG I PWN+P T+ PAL AG +++KP QTPL
Sbjct: 141 ALPVLTKTTEL-----RQPKGVVGVISPWNYPLTLAVSDAIPALLAGNAVVLKPDSQTPL 195
Query: 113 TALYYAHLAKLAGIPDGVLNVVPGFGPTAGAAICSHMDIDYVCFTGSTDVGRLVMQAAAA 172
TAL L AG+P + VV G GP G A+ + DY+ FTGST GR++ + A
Sbjct: 196 TALAAVELLYEAGLPRDLWQVVTGPGPVVGTALVDN--ADYLMFTGSTATGRVLAEQAG- 252
Query: 173 SNLKQVSLELGGKSPLLIFDDADLDTAADVALLGNLYNKGEICVASSRVFVQEGIYDKFE 232
L SLELGGK+P+++ DDADLD AA A+ N G++C++ R++V E IYD+F
Sbjct: 253 RRLIGFSLELGGKNPMIVLDDADLDKAAAGAVRACFSNAGQLCISIERIYVHESIYDEFV 312
Query: 233 KKLLEKAKAWLVGDPFDPTVRQGPQISERHFDRILSYIEHGKREGATLLTGGKPIGDKG- 291
+ + +A +G +D + G ISE + + ++++ +GAT+L GGK D G
Sbjct: 313 RAFVAAVRAMRLGAGYDYSADMGSLISEAQLETVSAHVDDAVAKGATVLAGGKARPDLGP 372
Query: 292 YYIEPTIFTNVKEDMIIAKEEIFGPVMALMKFKTVEEAIKSANNTQYGLAAGIVTKDLNV 351
+ EPT+ T V DM +A+EE FGPV+++ V+EA++ AN+T YGL A + T D
Sbjct: 373 LFYEPTVLTGVTPDMELAREETFGPVVSVYPVADVDEAVERANDTPYGLNASVWTGDTAR 432
Query: 352 ANTVSRSIRAGIIWINCYFGF---SMDCPYGGYKMSGFGREYGLESLYKYLQIKSVVT 406
++ IRAG + +N + S+D P GG K SG GR +G E L KY + +++ T
Sbjct: 433 GRAIAARIRAGTVNVNEGYAAAWGSVDAPMGGMKDSGLGRRHGAEGLLKYTESQTIAT 490
|
Length = 524 |
| >gnl|CDD|143470 cd07152, ALDH_BenzADH, NAD-dependent benzaldehyde dehydrogenase II-like | Back alignment and domain information |
|---|
Score = 318 bits (818), Expect = e-105
Identities = 154/398 (38%), Positives = 222/398 (55%), Gaps = 22/398 (5%)
Query: 3 KFADLIEEHVEELAALDALDAGKVYLRAKTA-EIPGAAEFLRFFAGAADKIHGEVLKMSS 61
+ ADL+EEH +E+A ++G + R K E+ A L AG + GE+L +
Sbjct: 43 RAADLLEEHADEIADWIVRESGSI--RPKAGFEVGAAIGELHEAAGLPTQPQGEILPSAP 100
Query: 62 ELQGYTLREPVGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLTA-LYYAHL 120
R P+GVVG I P+NFP + V+PALA G +++KP +TP++ + A L
Sbjct: 101 GRLSLARRVPLGVVGVISPFNFPLILAMRSVAPALALGNAVVLKPDPRTPVSGGVVIARL 160
Query: 121 AKLAGIPDGVLNVVPGFGPTAGAAICSHMDIDYVCFTGSTDVGRLVMQAAAASNLKQVSL 180
+ AG+P GVL+V+PG G AG A+ ++ + FTGST VGR V AA +LK+VSL
Sbjct: 161 FEEAGLPAGVLHVLPG-GADAGEALVEDPNVAMISFTGSTAVGRKV-GEAAGRHLKKVSL 218
Query: 181 ELGGKSPLLIFDDADLDTAADVALLGNLYNKGEICVASSRVFVQEGIYDKFEKKLLEKAK 240
ELGGK+ L++ DDADLD AA G ++G+IC+A+ R V E + D + KL KAK
Sbjct: 219 ELGGKNALIVLDDADLDLAASNGAWGAFLHQGQICMAAGRHLVHESVADAYTAKLAAKAK 278
Query: 241 AWLVGDPFDPTVRQGPQISERHFDRILSYIEHGKREGATLLTGGKPIGDKGYYIEPTIFT 300
VGDP V GP I+ R DR+ + ++ GA L GG G + PT+ +
Sbjct: 279 HLPVGDPATGQVALGPLINARQLDRVHAIVDDSVAAGARLEAGGT---YDGLFYRPTVLS 335
Query: 301 NVKEDMIIAKEEIFGPVMALMKFKTVEEAIKSANNTQYGLAAGIVTKDLNVANTVSRSIR 360
VK M EEIFGPV + F + EEA+ AN+T+YGL+AGI+++D+ A ++ +R
Sbjct: 336 GVKPGMPAFDEEIFGPVAPVTVFDSDEEAVALANDTEYGLSAGIISRDVGRAMALADRLR 395
Query: 361 AGIIWIN-------CYFGFSMDCPYGGYKMSGFGREYG 391
G++ IN + P+GG SG G +G
Sbjct: 396 TGMLHINDQTVNDEPH------NPFGGMGASGNGSRFG 427
|
NAD-dependent, benzaldehyde dehydrogenase II (XylC, BenzADH, EC=1.2.1.28) is involved in the oxidation of benzyl alcohol to benzoate. In Acinetobacter calcoaceticus, this process is carried out by the chromosomally encoded, benzyl alcohol dehydrogenase (xylB) and benzaldehyde dehydrogenase II (xylC) enzymes; whereas in Pseudomonas putida they are encoded by TOL plasmids. Length = 443 |
| >gnl|CDD|143419 cd07101, ALDH_SSADH2_GabD2, Mycobacterium tuberculosis succinate-semialdehyde dehydrogenase 2-like | Back alignment and domain information |
|---|
Score = 318 bits (818), Expect = e-105
Identities = 155/414 (37%), Positives = 230/414 (55%), Gaps = 17/414 (4%)
Query: 3 KFADLIEEHVEELAALDALDAGKVYLRAKTAEIPGAAEFLRFFAGAADKI------HGEV 56
+F DL+ E +EL L L+ GK A E+ A R++A A+++ G +
Sbjct: 48 RFHDLVLERRDELLDLIQLETGKARRHA-FEEVLDVAIVARYYARRAERLLKPRRRRGAI 106
Query: 57 LKMSSELQGYTLREPVGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLTALY 116
++ R P GVVG I PWN+P T+ PAL AG +++KP QT LTAL+
Sbjct: 107 PVLTRTTV---NRRPKGVVGVISPWNYPLTLAVSDAIPALLAGNAVVLKPDSQTALTALW 163
Query: 117 YAHLAKLAGIPDGVLNVVPGFGPTAGAAICSHMDIDYVCFTGSTDVGRLVMQAAAASNLK 176
L AG+P + VV G G G AI + DYV FTGST GR+V + A L
Sbjct: 164 AVELLIEAGLPRDLWQVVTGPGSEVGGAIVDN--ADYVMFTGSTATGRVVAERAG-RRLI 220
Query: 177 QVSLELGGKSPLLIFDDADLDTAADVALLGNLYNKGEICVASSRVFVQEGIYDKFEKKLL 236
SLELGGK+P+++ +DADLD AA A+ N G++CV+ R++V E +YD+F ++ +
Sbjct: 221 GCSLELGGKNPMIVLEDADLDKAAAGAVRACFSNAGQLCVSIERIYVHESVYDEFVRRFV 280
Query: 237 EKAKAWLVGDPFDPTVRQGPQISERHFDRILSYIEHGKREGATLLTGGKPIGDKG-YYIE 295
+ +A +G D G IS+ DR+ ++++ +GAT+L GG+ D G Y+ E
Sbjct: 281 ARTRALRLGAALDYGPDMGSLISQAQLDRVTAHVDDAVAKGATVLAGGRARPDLGPYFYE 340
Query: 296 PTIFTNVKEDMIIAKEEIFGPVMALMKFKTVEEAIKSANNTQYGLAAGIVTKDLNVANTV 355
PT+ T V EDM + EE FGPV+++ + +EAI+ AN+T YGL A + T+D +
Sbjct: 341 PTVLTGVTEDMELFAEETFGPVVSIYRVADDDEAIELANDTDYGLNASVWTRDGARGRRI 400
Query: 356 SRSIRAGIIWINCYFGF---SMDCPYGGYKMSGFGREYGLESLYKYLQIKSVVT 406
+ +RAG + +N + S+D P GG K SG GR +G E L KY + ++V
Sbjct: 401 AARLRAGTVNVNEGYAAAWASIDAPMGGMKDSGLGRRHGAEGLLKYTETQTVAV 454
|
Succinate-semialdehyde dehydrogenase 2 (SSADH2) and similar proteins are in this CD. SSADH1 (GabD1, EC=1.2.1.16) catalyzes the NADP(+)-dependent oxidation of succinate semialdehyde to succinate. SSADH activity in Mycobacterium tuberculosis is encoded by both gabD1 (Rv0234c) and gabD2 (Rv1731), however ,the Vmax of GabD1 was shown to be much higher than that of GabD2, and GabD2 (SSADH2) is likely to serve physiologically as a dehydrogenase for a different aldehyde(s). Length = 454 |
| >gnl|CDD|143413 cd07094, ALDH_F21_LactADH-like, ALDH subfamily: NAD+-dependent, lactaldehyde dehydrogenase, ALDH family 21 A1, and related proteins | Back alignment and domain information |
|---|
Score = 316 bits (811), Expect = e-104
Identities = 154/409 (37%), Positives = 234/409 (57%), Gaps = 13/409 (3%)
Query: 3 KFADLIEEHVEELAALDALDAGKVYLRAKTAEIPGAAEFLRFFAGAADKIHGEVLKM--- 59
+ ADL+++ EE A + A + GK A+ E+ A + LR A A++I GE + +
Sbjct: 51 RAADLLKKRAEEFAKIIACEGGKPIKDAR-VEVDRAIDTLRLAAEEAERIRGEEIPLDAT 109
Query: 60 --SSELQGYTLREPVGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLTALYY 117
S +T+REPVGVV I P+NFP + K++PA+A GC +++KPA +TPL+AL
Sbjct: 110 QGSDNRLAWTIREPVGVVLAITPFNFPLNLVAHKLAPAIATGCPVVLKPASKTPLSALEL 169
Query: 118 AHLAKLAGIPDGVLNVVPGFGPTAGAAICSHMDIDYVCFTGSTDVGRLVMQAAAASNLKQ 177
A + AG+P+GVL VV G G A + + + FTGS VG + A + K+
Sbjct: 170 AKILVEAGVPEGVLQVVTGEREVLGDAFAADERVAMLSFTGSAAVGEAL---RANAGGKR 226
Query: 178 VSLELGGKSPLLIFDDADLDTAADVALLGNLYNKGEICVASSRVFVQEGIYDKFEKKLLE 237
++LELGG +P+++ DADLD A + G Y+ G++C++ R++V E +YD+F + +
Sbjct: 227 IALELGGNAPVIVDRDADLDAAIEALAKGGFYHAGQVCISVQRIYVHEELYDEFIEAFVA 286
Query: 238 KAKAWLVGDPFDPTVRQGPQISERHFDRILSYIEHGKREGATLLTGGKPIGDKGYYIEPT 297
K VGDP D GP ISE +R+ ++E GA LL GG+ G +PT
Sbjct: 287 AVKKLKVGDPLDEDTDVGPLISEEAAERVERWVEEAVEAGARLLCGGER---DGALFKPT 343
Query: 298 IFTNVKEDMIIAKEEIFGPVMALMKFKTVEEAIKSANNTQYGLAAGIVTKDLNVANTVSR 357
+ +V D ++ EE FGPV+ ++++ EEAI+ AN+T YGL AGI T+DLNVA +
Sbjct: 344 VLEDVPRDTKLSTEETFGPVVPIIRYDDFEEAIRIANSTDYGLQAGIFTRDLNVAFKAAE 403
Query: 358 SIRAGIIWINCYFGFSMD-CPYGGYKMSGFGREYGLESLYKYLQIKSVV 405
+ G + +N F D P+GG K SG GRE ++ + + K+VV
Sbjct: 404 KLEVGGVMVNDSSAFRTDWMPFGGVKESGVGREGVPYAMEEMTEEKTVV 452
|
ALDH subfamily which includes Tortula ruralis aldehyde dehydrogenase ALDH21A1 (RNP123), and NAD+-dependent, lactaldehyde dehydrogenase (EC=1.2.1.22) and like sequences. Length = 453 |
| >gnl|CDD|183050 PRK11241, gabD, succinate-semialdehyde dehydrogenase I; Provisional | Back alignment and domain information |
|---|
Score = 315 bits (809), Expect = e-104
Identities = 163/401 (40%), Positives = 237/401 (59%), Gaps = 9/401 (2%)
Query: 6 DLIEEHVEELAALDALDAGKVYLRAKTAEIPGAAEFLRFFAGAADKIHGEVLK-MSSELQ 64
+L+ EH ++LA L L+ GK AK EI AA F+ +FA +I+G+ + ++ +
Sbjct: 81 NLMMEHQDDLARLMTLEQGKPLAEAK-GEISYAASFIEWFAEEGKRIYGDTIPGHQADKR 139
Query: 65 GYTLREPVGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLTALYYAHLAKLA 124
+++P+GV I PWNFP M K PALAAGCTM++KPA QTP +AL A LA A
Sbjct: 140 LIVIKQPIGVTAAITPWNFPAAMITRKAGPALAAGCTMVLKPASQTPFSALALAELAIRA 199
Query: 125 GIPDGVLNVVPGFGPTAGAAICSHMDIDYVCFTGSTDVGRLVMQAAAASNLKQVSLELGG 184
GIP GV NVV G G + S+ + + FTGST++GR +M A ++K+VSLELGG
Sbjct: 200 GIPAGVFNVVTGSAGAVGGELTSNPLVRKLSFTGSTEIGRQLM-EQCAKDIKKVSLELGG 258
Query: 185 KSPLLIFDDADLDTAADVALLGNLYNKGEICVASSRVFVQEGIYDKFEKKLLEKAKAWLV 244
+P ++FDDADLD A + AL N G+ CV ++R++VQ+G+YD+F +KL + +
Sbjct: 259 NAPFIVFDDADLDKAVEGALASKFRNAGQTCVCANRLYVQDGVYDRFAEKLQQAVSKLHI 318
Query: 245 GDPFDPTVRQGPQISERHFDRILSYIEHGKREGATLLTGGKPIGDKGYYIEPTIFTNVKE 304
GD + V GP I E+ ++ +I +GA ++ GGK G + +PTI +V
Sbjct: 319 GDGLEKGVTIGPLIDEKAVAKVEEHIADALEKGARVVCGGKAHELGGNFFQPTILVDVPA 378
Query: 305 DMIIAKEEIFGPVMALMKFKTVEEAIKSANNTQYGLAAGIVTKDLNVANTVSRSIRAGII 364
+ +AKEE FGP+ L +FK + I AN+T++GLAA +DL+ V ++ GI+
Sbjct: 379 NAKVAKEETFGPLAPLFRFKDEADVIAQANDTEFGLAAYFYARDLSRVFRVGEALEYGIV 438
Query: 365 WINCYFGFSMDCPYGGYKMSGFGRE---YGLESLYKYLQIK 402
IN + P+GG K SG GRE YG+E YL+IK
Sbjct: 439 GINTGIISNEVAPFGGIKASGLGREGSKYGIED---YLEIK 476
|
Length = 482 |
| >gnl|CDD|143465 cd07147, ALDH_F21_RNP123, Aldehyde dehydrogenase family 21A1-like | Back alignment and domain information |
|---|
Score = 312 bits (802), Expect = e-103
Identities = 149/411 (36%), Positives = 218/411 (53%), Gaps = 22/411 (5%)
Query: 5 ADLIEEHVEELAALDALDAGKVYLRAKTAEIPGAAEFLRFFAGAADKIHGEVLKM----- 59
+EE EELA L+AGK ++ E+ A + R A A +I+GEVL +
Sbjct: 53 VARLEERFEELAETIVLEAGKP-IKDARGEVARAIDTFRIAAEEATRIYGEVLPLDISAR 111
Query: 60 SSELQGYTLREPVGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLTALYYAH 119
QG R P+G V I P+NFP + KV+PA+AAGC ++KPA +TPL+AL
Sbjct: 112 GEGRQGLVRRFPIGPVSAITPFNFPLNLVAHKVAPAIAAGCPFVLKPASRTPLSALILGE 171
Query: 120 LAKLAGIPDGVLNVVPGFGPTAGAAI-CSHMDIDYVCFTGSTDVGRLVMQAAAASNLKQV 178
+ G+P G +V+P A + + I + FTGS VG + A K+V
Sbjct: 172 VLAETGLPKGAFSVLPC--SRDDADLLVTDERIKLLSFTGSPAVGWDLKARAGK---KKV 226
Query: 179 SLELGGKSPLLIFDDADLDTAADVALLGNLYNKGEICVASSRVFVQEGIYDKFEKKLLEK 238
LELGG + +++ DADLD AA + G Y G+ C++ RV V +YD+F+ +L+ +
Sbjct: 227 VLELGGNAAVIVDSDADLDFAAQRIIFGAFYQAGQSCISVQRVLVHRSVYDEFKSRLVAR 286
Query: 239 AKAWLVGDPFDPTVRQGPQISERHFDRILSYIEHGKREGATLLTGGKPIGDKGYYIEPTI 298
KA GDP D GP ISE +R+ ++ GA LLTGGK G +EPTI
Sbjct: 287 VKALKTGDPKDDATDVGPMISESEAERVEGWVNEAVDAGAKLLTGGK---RDGALLEPTI 343
Query: 299 FTNVKEDMIIAKEEIFGPVMALMKFKTVEEAIKSANNTQYGLAAGIVTKDLNVANTVSRS 358
+V DM + EE+FGPV+ + + +EA+ + N++++GL AG+ T+DL A
Sbjct: 344 LEDVPPDMEVNCEEVFGPVVTVEPYDDFDEALAAVNDSKFGLQAGVFTRDLEKALRAWDE 403
Query: 359 IRAGIIWINCYFGFSMD-CPYGGYKMSGFGRE---YGLESLYKYLQIKSVV 405
+ G + IN F +D PYGG K SG GRE Y +E + + + +V
Sbjct: 404 LEVGGVVINDVPTFRVDHMPYGGVKDSGIGREGVRYAIE---EMTEPRLLV 451
|
Aldehyde dehydrogenase ALDH21A1 (gene name RNP123) was first described in the moss Tortula ruralis and is believed to play an important role in the detoxification of aldehydes generated in response to desiccation- and salinity-stress, and ALDH21A1 expression represents a unique stress tolerance mechanism. So far, of plants, only the bryophyte sequence has been observed, but similar protein sequences from bacteria and archaea are also present in this CD. Length = 452 |
| >gnl|CDD|143423 cd07105, ALDH_SaliADH, Salicylaldehyde dehydrogenase, DoxF-like | Back alignment and domain information |
|---|
Score = 311 bits (799), Expect = e-103
Identities = 148/411 (36%), Positives = 219/411 (53%), Gaps = 19/411 (4%)
Query: 3 KFADLIEEHVEELAALDALDAGKVYLRAKTAEIPGAAEFLRFFAGAADKIHGEVLKMSSE 62
K ADL+E +E + G A + AA LR A +I G +
Sbjct: 30 KAADLLESRRDEFIEAMMEETGATAAWAGF-NVDLAAGMLREAASLITQIIGGSIPSDKP 88
Query: 63 LQ-GYTLREPVGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLTALYYAHLA 121
++EPVGVV I PWN P + ++ LAAG T+++K +E +P T +
Sbjct: 89 GTLAMVVKEPVGVVLGIAPWNAPVILGTRAIAYPLAAGNTVVLKASELSPRTHWLIGRVF 148
Query: 122 KLAGIPDGVLNVV---PGFGPTAGAAICSHMDIDYVCFTGSTDVGRLVMQAAAASNLKQV 178
AG+P GVLNVV P P A+ +H + V FTGST VGR++ + AA +LK V
Sbjct: 149 HEAGLPKGVLNVVTHSPEDAPEVVEALIAHPAVRKVNFTGSTRVGRIIAETAA-KHLKPV 207
Query: 179 SLELGGKSPLLIFDDADLDTAADVALLGNLYNKGEICVASSRVFVQEGIYDKFEKKLLEK 238
LELGGK+P ++ +DADLD AA+ AL G N G+IC+++ R+ V E I D+F +KL
Sbjct: 208 LLELGGKAPAIVLEDADLDAAANAALFGAFLNSGQICMSTERIIVHESIADEFVEKLKAA 267
Query: 239 AKAWLVGDPFDPTVRQGPQISERHFDRILSYIEHGKREGATLLTGGKP-IGDKGYYIEPT 297
A+ L P G +S DR+ ++ +GA L+ GG G + PT
Sbjct: 268 AEK-LFAGPVVL----GSLVSAAAADRVKELVDDALSKGAKLVVGGLADESPSGTSMPPT 322
Query: 298 IFTNVKEDMIIAKEEIFGPVMALMKFKTVEEAIKSANNTQYGLAAGIVTKDLNVANTVSR 357
I NV DM I EE FGPV+++++ K EEA++ AN+++YGL+A + T+DL A V++
Sbjct: 323 ILDNVTPDMDIYSEESFGPVVSIIRVKDEEEAVRIANDSEYGLSAAVFTRDLARALAVAK 382
Query: 358 SIRAGIIWINCYFGFSMD----CPYGGYKMSGFGREYGLESLYKYLQIKSV 404
I +G + IN G ++ P+GG K SG+GR G + ++ + K +
Sbjct: 383 RIESGAVHIN---GMTVHDEPTLPHGGVKSSGYGRFNGKWGIDEFTETKWI 430
|
Salicylaldehyde dehydrogenase (DoxF, SaliADH, EC=1.2.1.65) involved in the upper naphthalene catabolic pathway of Pseudomonas strain C18 and other similar sequences are present in this CD. Length = 432 |
| >gnl|CDD|132417 TIGR03374, ABALDH, 1-pyrroline dehydrogenase | Back alignment and domain information |
|---|
Score = 311 bits (799), Expect = e-102
Identities = 155/409 (37%), Positives = 236/409 (57%), Gaps = 13/409 (3%)
Query: 3 KFADLIEEHVEELAALDALDAGKVYLRAKTAEIPGAAEFLRFFAGAADKIHGEVLKMSSE 62
K AD+IEE+ + A L++ + GK EIP + RFFAGAA + G L
Sbjct: 68 KLADVIEENAQVFAELESRNCGKPLHSVFNDEIPAIVDVFRFFAGAARCLSG--LAAGEY 125
Query: 63 LQGYT---LREPVGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLTALYYAH 119
L+G+T R+P+GVV I PWN+P M K++PALAAG +++KP+E TPLTAL A
Sbjct: 126 LEGHTSMIRRDPLGVVASIAPWNYPLMMAAWKLAPALAAGNCVVLKPSEITPLTALKLAE 185
Query: 120 LAKLAGIPDGVLNVVPGFGPTAGAAICSHMDIDYVCFTGSTDVGRLVMQAAAASNLKQVS 179
LAK P GV+N++ G G T G + H + V TGS G ++ A S +K+
Sbjct: 186 LAKDI-FPAGVVNILFGRGKTVGDPLTGHEKVRMVSLTGSIATGEHILSHTAPS-IKRTH 243
Query: 180 LELGGKSPLLIFDDADLDTAADVALLGNLYNKGEICVASSRVFVQEGIYDKFEKKLLEKA 239
+ELGGK+P+++FDDAD+D + YN G+ C A+ R++ Q GIYD +KL
Sbjct: 244 MELGGKAPVIVFDDADIDAVVEGVRTFGFYNAGQDCTAACRIYAQRGIYDTLVEKLGAAV 303
Query: 240 KAWLVGDPFDPTVRQGPQISERHFDRILSYIEHGKREG-ATLLTGGKPIGDKGYYIEPTI 298
G P D + GP S H +R++ +E K G ++TGG+ GYY PT+
Sbjct: 304 ATLKSGAPDDESTELGPLSSLAHLERVMKAVEEAKALGHIKVITGGEKRKGNGYYFAPTL 363
Query: 299 FTNVKEDMIIAKEEIFGPVMALMKFKTVEEAIKSANNTQYGLAAGIVTKDLNVANTVSRS 358
K+D I ++E+FGPV+++ F E+ + AN++QYGLA+ + TKD+ A+ +S
Sbjct: 364 LAGAKQDDAIVQKEVFGPVVSITSFDDEEQVVNWANDSQYGLASSVWTKDVGRAHRLSAR 423
Query: 359 IRAGIIWINCYFGFSMDCPYGGYKMSGFGRE---YGLE--SLYKYLQIK 402
++ G W+N +F + P+GG K+SG+G++ YGLE ++ +++ +K
Sbjct: 424 LQYGCTWVNTHFMLVSEMPHGGQKLSGYGKDMSLYGLEDYTVVRHIMVK 472
|
Members of this protein family are 1-pyrroline dehydrogenase (1.5.1.35), also called gamma-aminobutyraldehyde dehydrogenase. This enzyme can follow putrescine transaminase (EC 2.6.1.82) for a two-step conversion of putrescine to gamma-aminobutyric acid (GABA). The member from Escherichia coli is characterized as a homotetramer that binds one NADH per momomer. This enzyme belongs to the medium-chain aldehyde dehydrogenases, and is quite similar in sequence to the betaine aldehyde dehydrogenase (EC 1.2.1.8) family. Length = 472 |
| >gnl|CDD|143404 cd07085, ALDH_F6_MMSDH, Methylmalonate semialdehyde dehydrogenase and ALDH family members 6A1 and 6B2 | Back alignment and domain information |
|---|
Score = 309 bits (795), Expect = e-101
Identities = 156/421 (37%), Positives = 225/421 (53%), Gaps = 25/421 (5%)
Query: 1 MWKFADLIEEHVEELAALDALDAGKVYLRAKTAEIPGAAEFLRFFAGAADKIHGEVLK-M 59
M+KF L+EE+++ELA L L+ GK A+ ++ E + F + GE L+ +
Sbjct: 66 MFKFRQLLEENLDELARLITLEHGKTLADAR-GDVLRGLEVVEFACSIPHLLKGEYLENV 124
Query: 60 SSELQGYTLREPVGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLTALYYAH 119
+ + Y+ R+P+GVV I P+NFP + A+A G T ++KP+E+ P A+ A
Sbjct: 125 ARGIDTYSYRQPLGVVAGITPFNFPAMIPLWMFPMAIACGNTFVLKPSERVPGAAMRLAE 184
Query: 120 LAKLAGIPDGVLNVVPGFGPTAGAAICSHMDIDYVCFTGSTDVGRLVMQAAAASNLKQVS 179
L + AG+PDGVLNVV G G A A+ H DI V F GST VG + + AAA+ K+V
Sbjct: 185 LLQEAGLPDGVLNVVHG-GKEAVNALLDHPDIKAVSFVGSTPVGEYIYERAAANG-KRVQ 242
Query: 180 LELGGKSPLLIFDDADLDTAADVALLGNLY-NKGEICVASSRVFVQEGIYDKFEKKLLEK 238
G K+ ++ DADL+ A+ AL+G + G+ C+A S D++ KL+E+
Sbjct: 243 ALGGAKNHAVVMPDADLEQTAN-ALVGAAFGAAGQRCMALSVAVAVGDEADEWIPKLVER 301
Query: 239 AKAWLVGDPFDPTVRQGPQISERHFDRILSYIEHGKREGATLLTGGK----PIGDKGYYI 294
AK VG DP GP IS +RI IE G EGA L+ G+ P + G ++
Sbjct: 302 AKKLKVGAGDDPGADMGPVISPAAKERIEGLIESGVEEGAKLVLDGRGVKVPGYENGNFV 361
Query: 295 EPTIFTNVKEDMIIAKEEIFGPVMALMKFKTVEEAIKSANNTQYGLAAGIVTKDLNVANT 354
PTI NV DM I KEEIFGPV+++++ T++EAI N YG A I T+ A
Sbjct: 362 GPTILDNVTPDMKIYKEEIFGPVLSIVRVDTLDEAIAIINANPYGNGAAIFTRSGAAARK 421
Query: 355 VSRSIRAGIIWINC-------YFGFSMDCPYGGYKMSGFG--REYGLESLYKYLQIKSVV 405
R + AG++ IN +F F GG+K S FG YG + + Y Q K+V
Sbjct: 422 FQREVDAGMVGINVPIPVPLAFFSF------GGWKGSFFGDLHFYGKDGVRFYTQTKTVT 475
Query: 406 T 406
+
Sbjct: 476 S 476
|
Methylmalonate semialdehyde dehydrogenase (MMSDH, EC=1.2.1.27) [acylating] from Bacillus subtilis is involved in valine metabolism and catalyses the NAD+- and CoA-dependent oxidation of methylmalonate semialdehyde into propionyl-CoA. Mitochondrial human MMSDH ALDH6A1 and Arabidopsis MMSDH ALDH6B2 are also present in this CD. Length = 478 |
| >gnl|CDD|182233 PRK10090, PRK10090, aldehyde dehydrogenase A; Provisional | Back alignment and domain information |
|---|
Score = 307 bits (789), Expect = e-101
Identities = 145/406 (35%), Positives = 229/406 (56%), Gaps = 4/406 (0%)
Query: 1 MWKFADLIEEHVEELAALDALDAGKVYLRAKTAEIPGAAEFLRFFAGAADKIHGEVLKMS 60
+ K A I E E++AL + GK+ A+ E+ A+++ + A A + GE+++
Sbjct: 1 LRKIAAGIRERASEISALIVEEGGKIQQLAEV-EVAFTADYIDYMAEWARRYEGEIIQSD 59
Query: 61 SELQG-YTLREPVGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLTALYYAH 119
+ + +GV I+PWNFP + K++PAL G T+++KP+E TP A+ +A
Sbjct: 60 RPGENILLFKRALGVTTGILPWNFPFFLIARKMAPALLTGNTIVIKPSEFTPNNAIAFAK 119
Query: 120 LAKLAGIPDGVLNVVPGFGPTAGAAICSHMDIDYVCFTGSTDVGRLVMQAAAASNLKQVS 179
+ G+P GV N+V G G T G + + + V TGS G +M AAA N+ +V
Sbjct: 120 IVDEIGLPKGVFNLVLGRGETVGQELAGNPKVAMVSMTGSVSAGEKIMAAAAK-NITKVC 178
Query: 180 LELGGKSPLLIFDDADLDTAADVALLGNLYNKGEICVASSRVFVQEGIYDKFEKKLLEKA 239
LELGGK+P ++ DDADLD A + + N G++C + RV+VQ+GIYD+F +L E
Sbjct: 179 LELGGKAPAIVMDDADLDLAVKAIVDSRVINSGQVCNCAERVYVQKGIYDQFVNRLGEAM 238
Query: 240 KAWLVGDPFD-PTVRQGPQISERHFDRILSYIEHGKREGATLLTGGKPIGDKGYYIEPTI 298
+A G+P + + GP I+ +R+ + EGA + GGK + KGYY PT+
Sbjct: 239 QAVQFGNPAERNDIAMGPLINAAALERVEQKVARAVEEGARVALGGKAVEGKGYYYPPTL 298
Query: 299 FTNVKEDMIIAKEEIFGPVMALMKFKTVEEAIKSANNTQYGLAAGIVTKDLNVANTVSRS 358
+V+++M I EE FGPV+ ++ F T+EEAI AN++ YGL + I T++LNVA +
Sbjct: 299 LLDVRQEMSIMHEETFGPVLPVVAFDTLEEAIAMANDSDYGLTSSIYTQNLNVAMKAIKG 358
Query: 359 IRAGIIWINCYFGFSMDCPYGGYKMSGFGREYGLESLYKYLQIKSV 404
++ G +IN +M + G++ SG G G L++YLQ + V
Sbjct: 359 LKFGETYINRENFEAMQGFHAGWRKSGIGGADGKHGLHEYLQTQVV 404
|
Length = 409 |
| >gnl|CDD|143464 cd07146, ALDH_PhpJ, Streptomyces putative phosphonoformaldehyde dehydrogenase PhpJ-like | Back alignment and domain information |
|---|
Score = 297 bits (762), Expect = 4e-97
Identities = 152/412 (36%), Positives = 229/412 (55%), Gaps = 18/412 (4%)
Query: 3 KFADLIEEHVEELAALDALDAGKVYLRAKTAEIPGAAEFLRFFAGAADKIHGEVLKMSSE 62
K A L+E EE A L L++G + E+ AA+ LRF A A + GE S +
Sbjct: 48 KAAALLEARREEFARLITLESGLCLKDTRY-EVGRAADVLRFAAAEALRDDGES--FSCD 104
Query: 63 L-------QGYTLREPVGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLTAL 115
L + +TLREP+GVV I P+N P K++PA+AA +++KP+E+TPL+A+
Sbjct: 105 LTANGKARKIFTLREPLGVVLAITPFNHPLNQVAHKIAPAIAANNRIVLKPSEKTPLSAI 164
Query: 116 YYAHLAKLAGIPDGVLNVVPGFGPTAGAAICSHMDIDYVCFTGSTDVGRLVMQAAAASNL 175
Y A L AG+P +L+VV G G + +H D+D V FTG VG+ + AA A
Sbjct: 165 YLADLLYEAGLPPDMLSVVTGEPGEIGDELITHPDVDLVTFTGGVAVGKAI--AATAGYK 222
Query: 176 KQVSLELGGKSPLLIFDDADLDTAADVALLGNLYNKGEICVASSRVFVQEGIYDKFEKKL 235
+Q+ LELGG PL++ DDADL+ AA +A+ G+ N G+ C A R+ V E + D+F L
Sbjct: 223 RQL-LELGGNDPLIVMDDADLERAATLAVAGSYANSGQRCTAVKRILVHESVADEFVDLL 281
Query: 236 LEKAKAWLVGDPFDPTVRQGPQISERHFDRILSYIEHGKREGATLLTGGKPIGDKGYYIE 295
+EK+ A +VGDP DP G I E +I + +E +GA +L G +G
Sbjct: 282 VEKSAALVVGDPMDPATDMGTVIDEEAAIQIENRVEEAIAQGARVLLGN---QRQGALYA 338
Query: 296 PTIFTNVKEDMIIAKEEIFGPVMALMKFKTVEEAIKSANNTQYGLAAGIVTKDLNVANTV 355
PT+ +V D + EE FGPV +++ K ++EAI +N+T YGL++G+ T DL+ +
Sbjct: 339 PTVLDHVPPDAELVTEETFGPVAPVIRVKDLDEAIAISNSTAYGLSSGVCTNDLDTIKRL 398
Query: 356 SRSIRAGIIWINCYFGFSMD-CPYGGYKMSGFG-REYGLESLYKYLQIKSVV 405
+ G + +N GF + P+GG K SG G +E E++ + +K+
Sbjct: 399 VERLDVGTVNVNEVPGFRSELSPFGGVKDSGLGGKEGVREAMKEMTNVKTYS 450
|
Putative phosphonoformaldehyde dehydrogenase (PhpJ), an aldehyde dehydrogenase homolog reportedly involved in the biosynthesis of phosphinothricin tripeptides in Streptomyces viridochromogenes DSM 40736, and similar sequences are included in this CD. Length = 451 |
| >gnl|CDD|212007 TIGR04284, aldehy_Rv0768, aldehyde dehydrogenase, Rv0768 family | Back alignment and domain information |
|---|
Score = 296 bits (760), Expect = 2e-96
Identities = 151/413 (36%), Positives = 215/413 (52%), Gaps = 15/413 (3%)
Query: 6 DLIEEHVEELAALDALDAGKVYLRAKTAEIPGAAEFLRFFAGAADKIH-----GEVLKMS 60
D + HVEEL L + G + A++ G + L F A A+ G M
Sbjct: 71 DALRAHVEELRELTIAEVGAPRMLTAGAQLEGPVDDLGFAADLAESYAWTTDLGVASPMG 130
Query: 61 SELQGYTLREPVGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLTALYYAHL 120
+ RE VGVVG I PWNFP + K+ PALAAG T+++KPA TP A A L
Sbjct: 131 IPTRRTLRREAVGVVGAITPWNFPHQINLAKLGPALAAGNTVVLKPAPDTPWCA---AVL 187
Query: 121 AKLAG----IPDGVLNVVPGFGPTAGAAICSHMDIDYVCFTGSTDVGRLVMQAAAASNLK 176
+L P GV+N+V GA + +D V FTGST GR VM AAA+ LK
Sbjct: 188 GELIAEHTDFPPGVVNIVTSSDHRLGALLAKDPRVDMVSFTGSTATGRAVMADAAAT-LK 246
Query: 177 QVSLELGGKSPLLIFDDADLDTAADVALLGNLYNKGEICVASSRVFVQEGIYDKFEKKLL 236
+V LELGGKS ++ DDADL A +A + G+ C ++R+ V YD+
Sbjct: 247 KVFLELGGKSAFIVLDDADLAAACSMAAFTVCMHAGQGCAITTRLVVPRARYDEAVAAAA 306
Query: 237 EKAKAWLVGDPFDPTVRQGPQISERHFDRILSYIEHGKREGATLLTGG-KPIG-DKGYYI 294
+ GDP DP GP IS R DR+ SY++ EG GG +P D+G+++
Sbjct: 307 ATMGSIKPGDPADPGTVCGPVISARQRDRVQSYLDLAVAEGGRFACGGGRPADRDRGFFV 366
Query: 295 EPTIFTNVKEDMIIAKEEIFGPVMALMKFKTVEEAIKSANNTQYGLAAGIVTKDLNVANT 354
EPT+ + + +A+EEIFGPV+ ++ ++A++ AN++ YGL+ + D A
Sbjct: 367 EPTVIAGLDNNARVAREEIFGPVLTVIAHDGDDDAVRIANDSPYGLSGTVFGADPERAAA 426
Query: 355 VSRSIRAGIIWINCYFGFSMDCPYGGYKMSGFGREYGLESLYKYLQIKSVVTP 407
V+ +R G + +N +S D P+GGYK SG GRE G+ +YL+ K + T
Sbjct: 427 VAARVRTGTVNVNGGVWYSADAPFGGYKQSGIGREMGVAGFEEYLETKLIATA 479
|
This family describes a branch of the aldehyde dehydrogenase (NAD) family (see pfam00171) that includes Rv0768 from Mycobacterium tuberculosis. All members of this family belong to species predicted to synthesize mycofactocin, suggesting that this enzyme or another upstream or downstream in the same pathway might be mycofactocin-dependent. However, the taxonomic range of this family is not nearly broad enough to make that relationship conclusive [Unknown function, Enzymes of unknown specificity]. Length = 480 |
| >gnl|CDD|143401 cd07082, ALDH_F11_NP-GAPDH, NADP+-dependent non-phosphorylating glyceraldehyde 3-phosphate dehydrogenase and ALDH family 11 | Back alignment and domain information |
|---|
Score = 295 bits (758), Expect = 3e-96
Identities = 146/420 (34%), Positives = 215/420 (51%), Gaps = 32/420 (7%)
Query: 3 KFADLIEEHVEELAALDALDAGKVYLRAKTAEIPGAAEFLRFFAGAADKIHGEVLKM--- 59
KFADL++E+ EE+A L + GK A E+ +++R ++ G+ L
Sbjct: 69 KFADLLKENKEEVANLLMWEIGKTLKDALK-EVDRTIDYIRDTIEELKRLDGDSLPGDWF 127
Query: 60 --SSELQGYTLREPVGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLTALYY 117
+ REP+GVV I P+N+P + K+ PAL G T++ KPA Q L +
Sbjct: 128 PGTKGKIAQVRREPLGVVLAIGPFNYPLNLTVSKLIPALIMGNTVVFKPATQGVLLGIPL 187
Query: 118 AHLAKLAGIPDGVLNVVPGFGPTAGAAICSHMDIDYVCFTGSTDVGRLVMQAAAASNLKQ 177
A AG P GV+NVV G G G + +H ID + FTGST+VG + + +K+
Sbjct: 188 AEAFHDAGFPKGVVNVVTGRGREIGDPLVTHGRIDVISFTGSTEVGNRLKKQHP---MKR 244
Query: 178 VSLELGGKSPLLIFDDADLDTAADVALLGNL-YNKGEICVASSRVFVQEGIYDKFEKKLL 236
+ LELGGK P ++ DADL+ AA + G L Y+ G+ C A RV V E + D+ + L
Sbjct: 245 LVLELGGKDPAIVLPDADLELAAKEIVKGALSYS-GQRCTAIKRVLVHESVADELVELLK 303
Query: 237 EKAKAWLVGDPFDPTVRQGPQISERHFDRILSYIEHGKREGATLLTGGKPIGDKGYYIEP 296
E+ VG P+D V P I + D + I+ +GAT+L GG + G I P
Sbjct: 304 EEVAKLKVGMPWDNGVDITPLIDPKSADFVEGLIDDAVAKGATVLNGGG--REGGNLIYP 361
Query: 297 TIFTNVKEDMIIAKEEIFGPVMALMKFKTVEEAIKSANNTQYGLAAGIVTKDLNVANTVS 356
T+ V DM +A EE FGPV+ +++ +EEAI+ AN + YGL A I TKD+N A ++
Sbjct: 362 TLLDPVTPDMRLAWEEPFGPVLPIIRVNDIEEAIELANKSNYGLQASIFTKDINKARKLA 421
Query: 357 RSIRAGIIWINC-------YFGFSMDCPYGGYKMSGFGRE---YGLESLYKYLQIKSVVT 406
++ G + IN +F P+ G K SG G + L S+ + K +V
Sbjct: 422 DALEVGTVNINSKCQRGPDHF------PFLGRKDSGIGTQGIGDALRSMTRR---KGIVI 472
|
NADP+-dependent non-phosphorylating glyceraldehyde 3-phosphate dehydrogenase (NP-GAPDH, EC=1.2.1.9) catalyzes the irreversible oxidation of glyceraldehyde 3-phosphate to 3-phosphoglycerate generating NADPH for biosynthetic reactions. This CD also includes the Arabidopsis thaliana osmotic-stress-inducible ALDH family 11, ALDH11A3 and similar sequences. In autotrophic eukaryotes, NP-GAPDH generates NADPH for biosynthetic processes from photosynthetic glyceraldehyde-3-phosphate exported from the chloroplast and catalyzes one of the classic glycolytic bypass reactions unique to plants. Length = 473 |
| >gnl|CDD|143416 cd07098, ALDH_F15-22, Aldehyde dehydrogenase family 15A1 and 22A1-like | Back alignment and domain information |
|---|
Score = 287 bits (736), Expect = 6e-93
Identities = 151/420 (35%), Positives = 214/420 (50%), Gaps = 26/420 (6%)
Query: 6 DLIEEHVEELAALDALDAGKVYLRAKTAEIPGAAEFLRFFAGAADKIHGE-VLKMSSELQ 64
I E+ EE+ + D GK + A EI E +R+ HGE L+ S
Sbjct: 51 KYILENQEEICRVACRDTGKTMVDASLGEILVTCEKIRWTLK-----HGEKALRPESRPG 105
Query: 65 GYTL--------REPVGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLTALY 116
G + EP+GVVG I+ WN+P + AL AG ++VK +EQ ++ +
Sbjct: 106 GLLMFYKRARVEYEPLGVVGAIVSWNYPFHNLLGPIIAALFAGNAIVVKVSEQVAWSSGF 165
Query: 117 YAHLAKLA----GIPDGVLNVVPGFGPTAGAAICSHMDIDYVCFTGSTDVGRLVMQAAAA 172
+ + + G ++ +V T A+ SH ID++ F GS VG+ VM AAAA
Sbjct: 166 FLSIIRECLAACGHDPDLVQLVTCLPET-AEALTSHPVIDHITFIGSPPVGKKVM-AAAA 223
Query: 173 SNLKQVSLELGGKSPLLIFDDADLDTAADVALLGNLYNKGEICVASSRVFVQEGIYDKFE 232
+L V LELGGK P ++ DDADLD A + + G + G+ C+ RV V E IYDK
Sbjct: 224 ESLTPVVLELGGKDPAIVLDDADLDQIASIIMRGTFQSSGQNCIGIERVIVHEKIYDKLL 283
Query: 233 KKLLEKAKAWLVGDPFDPTVRQGPQISERHFDRILSYIEHGKREGATLLTGGK----PIG 288
+ L ++ +A G P D V G IS FDR+ + +GA LL GGK P
Sbjct: 284 EILTDRVQALRQGPPLDGDVDVGAMISPARFDRLEELVADAVEKGARLLAGGKRYPHPEY 343
Query: 289 DKGYYIEPTIFTNVKEDMIIAKEEIFGPVMALMKFKTVEEAIKSANNTQYGLAAGIVTKD 348
+G+Y PT+ +V DM IA+EE+FGPVM +MK EEA++ AN+T+YGL A + KD
Sbjct: 344 PQGHYFPPTLLVDVTPDMKIAQEEVFGPVMVVMKASDDEEAVEIANSTEYGLGASVFGKD 403
Query: 349 LNVANTVSRSIRAGIIWINCYFGFSMDC--PYGGYKMSGFGREYGLESLYKYLQIKSVVT 406
+ A ++ + G++ IN + P+GG K SGFGR G E L KSV
Sbjct: 404 IKRARRIASQLETGMVAINDFGVNYYVQQLPFGGVKGSGFGRFAGEEGLRGLCNPKSVTE 463
|
Aldehyde dehydrogenase family members ALDH15A1 (Saccharomyces cerevisiae YHR039C) and ALDH22A1 (Arabidopsis thaliana, EC=1.2.1.3), and similar sequences, are in this CD. Significant improvement of stress tolerance in tobacco plants was observed by overexpressing the ALDH22A1 gene from maize (Zea mays) and was accompanied by a reduction of malondialdehyde derived from cellular lipid peroxidation. Length = 465 |
| >gnl|CDD|143420 cd07102, ALDH_EDX86601, Uncharacterized aldehyde dehydrogenase of Synechococcus sp | Back alignment and domain information |
|---|
Score = 285 bits (732), Expect = 1e-92
Identities = 137/405 (33%), Positives = 204/405 (50%), Gaps = 16/405 (3%)
Query: 3 KFADLIEEHVEELAALDALDAGKVYLRAKTAEIPGAAEFLRFFAG-AADKIHGEVLKMSS 61
+ +L+ + +E+A G+ + EI G E R+ A + + +
Sbjct: 48 RAVELLAANTDEIAEELTWQMGRP-IAQAGGEIRGMLERARYMISIAEEALADIRVPEKD 106
Query: 62 ELQGYTLREPVGVVGHIIPWNFPTTMFFMKVS---PALAAGCTMIVKPAEQTPLTALYYA 118
+ Y REP+GVV I PWN+P + V+ PAL AG +I+K + QTPL +A
Sbjct: 107 GFERYIRREPLGVVLIIAPWNYP---YLTAVNAVIPALLAGNAVILKHSPQTPLCGERFA 163
Query: 119 HLAKLAGIPDGVLNVVPGFGPTAGAAICSHMDIDYVCFTGSTDVGRLVMQAAAASNLKQV 178
AG+P+GV V+ T AA+ + ID+V FTGS GR + +AAA +V
Sbjct: 164 AAFAEAGLPEGVFQVLHLSHET-SAALIADPRIDHVSFTGSVAGGRAIQRAAAG-RFIKV 221
Query: 179 SLELGGKSPLLIFDDADLDTAADVALLGNLYNKGEICVASSRVFVQEGIYDKFEKKLLEK 238
LELGGK P + DADLD AA+ + G +N G+ C + R++V E IYD F + +
Sbjct: 222 GLELGGKDPAYVRPDADLDAAAESLVDGAFFNSGQSCCSIERIYVHESIYDAFVEAFVAV 281
Query: 239 AKAWLVGDPFDPTVRQGPQISERHFDRILSYIEHGKREGATLLTGGK--PIGD-KGYYIE 295
K + +GDP DP+ GP +S R D + + I +GA L G P G Y+
Sbjct: 282 VKGYKLGDPLDPSTTLGPVVSARAADFVRAQIADAIAKGARALIDGALFPEDKAGGAYLA 341
Query: 296 PTIFTNVKEDMIIAKEEIFGPVMALMKFKTVEEAIKSANNTQYGLAAGIVTKDLNVANTV 355
PT+ TNV M + +EE FGPV+ +MK K+ EAI N+++YGL A + TKD+ A +
Sbjct: 342 PTVLTNVDHSMRVMREETFGPVVGIMKVKSDAEAIALMNDSEYGLTASVWTKDIARAEAL 401
Query: 356 SRSIRAGIIWINCYFGFSMDCPYGGYKMSGFG---REYGLESLYK 397
+ G +++N + G K SG G G + L +
Sbjct: 402 GEQLETGTVFMNRCDYLDPALAWTGVKDSGRGVTLSRLGYDQLTR 446
|
PCC 7335 (EDX86601). Uncharacterized aldehyde dehydrogenase of Synechococcus sp. PCC 7335 (locus EDX86601) and other similar sequences, are present in this CD. Length = 452 |
| >gnl|CDD|179543 PRK03137, PRK03137, 1-pyrroline-5-carboxylate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 281 bits (720), Expect = 4e-90
Identities = 150/417 (35%), Positives = 222/417 (53%), Gaps = 24/417 (5%)
Query: 3 KFADLIEEHVEELAALDALDAGKVYLRAKTAEIPGAAEFLRFFAGAADKI-HGE-VLKMS 60
+ A +I E +A +AGK + A A+ A +FL ++A K+ G+ V
Sbjct: 103 RAAAIIRRRKHEFSAWLVKEAGKPWAEA-DADTAEAIDFLEYYARQMLKLADGKPVESRP 161
Query: 61 SELQGYTLREPVGVVGHIIPWNFPTT-MFFMKVSPALAAGCTMIVKPAEQTPLTALYYAH 119
E Y P+GV I PWNFP M M ++ + AG T+++KPA TP+ A +
Sbjct: 162 GEHNRY-FYIPLGVGVVISPWNFPFAIMAGMTLAA-IVAGNTVLLKPASDTPVIAAKFVE 219
Query: 120 LAKLAGIPDGVLNVVPGFGPTAGAAICSHMDIDYVCFTGSTDVGRLVMQAAAASN----- 174
+ + AG+P GV+N VPG G G + H ++ FTGS +VG + + AA
Sbjct: 220 VLEEAGLPAGVVNFVPGSGSEVGDYLVDHPKTRFITFTGSREVGLRIYERAAKVQPGQIW 279
Query: 175 LKQVSLELGGKSPLLIFDDADLDTAADVALLGNLYNKGEICVASSRVFVQEGIYDKFEKK 234
LK+V E+GGK +++ +DADLD AA+ + G+ C A SR V E +YD+ +K
Sbjct: 280 LKRVIAEMGGKDAIVVDEDADLDLAAESIVASAFGFSGQKCSACSRAIVHEDVYDEVLEK 339
Query: 235 LLEKAKAWLVGDPFDPTVRQGPQISERHFDRILSYIEHGKREGATLLTGGKPIGDKGYYI 294
++E K VG+P D GP I++ FD+I+SYIE GK EG L+ GG+ KGY+I
Sbjct: 340 VVELTKELTVGNPEDNAY-MGPVINQASFDKIMSYIEIGKEEG-RLVLGGEGDDSKGYFI 397
Query: 295 EPTIFTNVKEDMIIAKEEIFGPVMALMKFKTVEEAIKSANNTQYGLAAGIVTKDLNVANT 354
+PTIF +V I +EEIFGPV+A +K K + A++ ANNT+YGL +++ +
Sbjct: 398 QPTIFADVDPKARIMQEEIFGPVVAFIKAKDFDHALEIANNTEYGLTGAVISNNREHLEK 457
Query: 355 VSRSIRAGIIWIN--CYFGFSMDCPYGGYKMSGF-----GREYGLESLYKYLQIKSV 404
R G ++ N C P+GG+ MSG G +Y L +LQ K+V
Sbjct: 458 ARREFHVGNLYFNRGCTGAIVGYHPFGGFNMSGTDSKAGGPDY----LLLFLQAKTV 510
|
Length = 514 |
| >gnl|CDD|200087 TIGR01237, D1pyr5carbox2, delta-1-pyrroline-5-carboxylate dehydrogenase, group 2, putative | Back alignment and domain information |
|---|
Score = 265 bits (679), Expect = 6e-84
Identities = 136/414 (32%), Positives = 216/414 (52%), Gaps = 13/414 (3%)
Query: 1 MWKFADLIEEHVEELAALDALDAGKVYLRAKTAEIPGAAEFLRFFAGAADKI--HGEVLK 58
++K A ++ E +AL + GK + A AE+ A +F+ ++A ++ V
Sbjct: 97 LFKAAAIVRRRRHEFSALLVKEVGKPWNEAD-AEVAEAIDFMEYYARQMIELAKGKPVNS 155
Query: 59 MSSELQGYTLREPVGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLTALYYA 118
E Y + P GV I PWNFP + + G +++KPAE P+ A +
Sbjct: 156 REGETNQY-VYTPTGVTVVISPWNFPFAIMVGMTVAPIVTGNCVVLKPAEAAPVIAAKFV 214
Query: 119 HLAKLAGIPDGVLNVVPGFGPTAGAAICSHMDIDYVCFTGSTDVGRLVMQAAA-----AS 173
+ + AG+P GV+ VPG G G + H + FTGS +VG + + AA
Sbjct: 215 EILEEAGLPKGVVQFVPGSGSEVGDYLVDHPKTSLITFTGSREVGTRIFERAAKVQPGQK 274
Query: 174 NLKQVSLELGGKSPLLIFDDADLDTAADVALLGNLYNKGEICVASSRVFVQEGIYDKFEK 233
+LK+V E+GGK +++ +DAD++ AA A G+ C A SR V E +YD+ +
Sbjct: 275 HLKRVIAEMGGKDTVIVDEDADIELAAQSAFTSAFGFAGQKCSAGSRAVVHEKVYDEVVE 334
Query: 234 KLLEKAKAWLVGDPFDPTVRQGPQISERHFDRILSYIEHGKREGATLLTGGKPIGDKGYY 293
+ +E ++ VG P V GP I ++ F++I+ YIE GK EG L++GG KGY+
Sbjct: 335 RFVEITESLKVGPPDSADVYVGPVIDQKSFNKIMEYIEIGKAEG-RLVSGGCGDDSKGYF 393
Query: 294 IEPTIFTNVKEDMIIAKEEIFGPVMALMKFKTVEEAIKSANNTQYGLAAGIVTKDLNVAN 353
I PTIF +V +A+EEIFGPV+A ++ +EA++ ANNT+YGL G+++ + + N
Sbjct: 394 IGPTIFADVDRKARLAQEEIFGPVVAFIRASDFDEALEIANNTEYGLTGGVISNNRDHIN 453
Query: 354 TVSRSIRAGIIWIN--CYFGFSMDCPYGGYKMSGFGREY-GLESLYKYLQIKSV 404
G ++ N P+GG+KMSG + G + L ++Q K+V
Sbjct: 454 RAKAEFEVGNLYFNRNITGAIVGYQPFGGFKMSGTDSKAGGPDYLALFMQAKTV 507
|
This enzyme is the second of two in the degradation of proline to glutamate. This model represents one of several related branches of delta-1-pyrroline-5-carboxylate dehydrogenase. Members of this branch may be associated with proline dehydrogenase (the other enzyme of the pathway from proline to glutamate) but have not been demonstrated experimentally. The branches are not as closely related to each other as some distinct aldehyde dehydrogenases are to some; separate models were built to let each model describe a set of equivalogs [Energy metabolism, Amino acids and amines]. Length = 511 |
| >gnl|CDD|132294 TIGR03250, PhnAcAld_DH, putative phosphonoacetaldehyde dehydrogenase | Back alignment and domain information |
|---|
Score = 247 bits (632), Expect = 2e-77
Identities = 139/417 (33%), Positives = 223/417 (53%), Gaps = 20/417 (4%)
Query: 5 ADLIEEHVEELAALDALDAGKVYLRAKTAEIPGAAEFLRFFAGAADKIHGEVLKMSSELQ 64
A L+ EE++ L L++G + + E+ A+ L F A A + G++
Sbjct: 68 AALLAARKEEISDLITLESG-LSKKDSLYEVGRVADVLTFAAAEALRDDGQIFSCDLTPH 126
Query: 65 G-----YTLREPV-GVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLTALYYA 118
G +T REP+ GV+ I P+N P K++PA+A M+VKP+E+TPL+ALY A
Sbjct: 127 GKARKVFTQREPLLGVISAITPFNHPMNQVAHKIAPAIATNNRMVVKPSEKTPLSALYLA 186
Query: 119 HLAKLAGIPDGVLNVVPGFGPTAGAAICSHMDIDYVCFTGSTDVGRLVMQAAAASNLKQV 178
+ AG+P +L VV G + ++ +D V FTG +G+ + AA + ++
Sbjct: 187 DILYEAGLPPQMLQVVTGDPREIADELITNPHVDLVTFTGGVAIGKYI---AARAGYRRQ 243
Query: 179 SLELGGKSPLLIFDDADLDTAADVALLGNLYNKGEICVASSRVFVQEGIYDKFEKKLLEK 238
LELGG PL++ +DADLD AAD+A+ G+ N G+ C A R+ VQE + D+F + L+EK
Sbjct: 244 VLELGGNDPLIVMEDADLDRAADLAVKGSYKNSGQRCTAVKRMLVQESVADRFTELLVEK 303
Query: 239 AKAWLVGDPFDPTVRQGPQISERHFDRILSYIEHGKREGATLLTGGKPIGDKGYYIEPTI 298
+AW GDP DP+V G I E + + +GA LL G G PT+
Sbjct: 304 TRAWRYGDPMDPSVDMGTVIDEAAAILFEARVNEAIAQGARLLLGN---VRDGALYAPTV 360
Query: 299 FTNVKEDMIIAKEEIFGPVMALMKFKTVEEAIKSANNTQYGLAAGIVTKDLNVANTVSRS 358
V M + +EE FGPV +++F +++AI+ +N+T YGL++G+ T L+
Sbjct: 361 LDRVDPSMTLVREETFGPVSPVIRFCDIDDAIRISNSTAYGLSSGVCTNRLDYITRFIAE 420
Query: 359 IRAGIIWINCYFGFSMD-CPYGGYKMSGFGREYG-LESLYKYLQIKSVVTPIYNSPW 413
++ G + + G+ ++ P+GG K SG G + G E++ + +K+ Y+ PW
Sbjct: 421 LQVGTVNVWEVPGYRLELTPFGGIKDSGLGYKEGVQEAMKSFTNLKT-----YSLPW 472
|
This family of genes are members of the pfam00171 NAD-dependent aldehyde dehydrogenase family. These genes are observed in Ralstonia eutropha JMP134, Sinorhizobium meliloti 1021, Burkholderia mallei ATCC 23344, Burkholderia thailandensis E264, Burkholderia cenocepacia AU 1054, Burkholderia pseudomallei K96243 and 1710b, Burkholderia xenovorans LB400, Burkholderia sp. 383 and Polaromonas sp. JS666 in close proximity to the PhnW gene (TIGR02326) encoding 2-aminoethyl phosphonate aminotransferase (which generates phosphonoacetaldehyde) and PhnA (TIGR02335) encoding phosphonoacetate hydrolase (not to be confused with the alkylphosphonate utilization operon protein PhnA modeled by TIGR00686). Additionally, transporters believed to be specific for 2-aminoethyl phosphonate are often present. PhnW is, in other organisms, coupled with PhnX (TIGR01422) for the degradation of phosphonoacetaldehyde (GenProp0238), but PhnX is apparently absent in each of the organisms containing this aldehyde reductase. PhnA, characterized in a strain of Pseudomonas fluorescens that has not het been genome sequenced, is only rarely found outside of the PhnW and aldehyde dehydrogenase context. For instance in Rhodopseudomonas and Bordetella bronchiseptica, where it is adjacent to transporters presumably specific for the import of phosphonoacetate. It seems reasonably certain then, that this enzyme catalyzes the NAD-dependent oxidation of phosphonoacetaldehyde to phosphonoacetate, bridging the metabolic gap between PhnW and PhnA. We propose the name phosphonoacetaldehyde dehydrogenase and the gene symbol PhnY for this enzyme. Length = 472 |
| >gnl|CDD|143466 cd07148, ALDH_RL0313, Uncharacterized ALDH ( RL0313) with similarity to Tortula ruralis aldehyde dehydrogenase ALDH21A1 | Back alignment and domain information |
|---|
Score = 237 bits (606), Expect = 9e-74
Identities = 139/393 (35%), Positives = 205/393 (52%), Gaps = 16/393 (4%)
Query: 3 KFADLIEEHVEELAALDALDAGKVYLRAK---TAEIPG---AAEFLRFFAGAADKIHGEV 56
+ ADL+EE +ELA L A + GK + AK T I G AA+ L G +I +
Sbjct: 52 RLADLMEERADELALLIAREGGKPLVDAKVEVTRAIDGVELAADELGQLGGR--EIPMGL 109
Query: 57 LKMSSELQGYTLREPVGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLTALY 116
S+ +T REP+GVV I +N P + +V+PA+AAGC +IVKPA TPL+ L
Sbjct: 110 TPASAGRIAFTTREPIGVVVAISAFNHPLNLIVHQVAPAIAAGCPVIVKPALATPLSCLA 169
Query: 117 YAHLAKLAGIPDGVLNVVPGFGPTAGAAICSHMDIDYVCFTGSTDVG-RLVMQAAAASNL 175
+ L AG+P+G VP A + + + F GS VG L + A +
Sbjct: 170 FVDLLHEAGLPEGWCQAVPCENAVAEKLVTDPR-VAFFSFIGSARVGWMLRSKLAPGT-- 226
Query: 176 KQVSLELGGKSPLLIFDDADLDTAADVALLGNLYNKGEICVASSRVFVQEGIYDKFEKKL 235
+ +LE GG +P+++ ADLD + G Y+ G++CV+ RVFV I D F ++L
Sbjct: 227 -RCALEHGGAAPVIVDRSADLDAMIPPLVKGGFYHAGQVCVSVQRVFVPAEIADDFAQRL 285
Query: 236 LEKAKAWLVGDPFDPTVRQGPQISERHFDRILSYIEHGKREGATLLTGGKPIGDKGYYIE 295
A+ +VGDP DP GP I R DR+ ++ GA LL GGK + D Y
Sbjct: 286 AAAAEKLVVGDPTDPDTEVGPLIRPREVDRVEEWVNEAVAAGARLLCGGKRLSDTTY--A 343
Query: 296 PTIFTNVKEDMIIAKEEIFGPVMALMKFKTVEEAIKSANNTQYGLAAGIVTKDLNVANTV 355
PT+ + D ++ +EIFGPV+ + + ++EAI AN+ A + TKDL+VA
Sbjct: 344 PTVLLDPPRDAKVSTQEIFGPVVCVYSYDDLDEAIAQANSLPVAFQAAVFTKDLDVALKA 403
Query: 356 SRSIRAGIIWINCYFGFSMD-CPYGGYKMSGFG 387
R + A + +N + F +D P+ G + SG+G
Sbjct: 404 VRRLDATAVMVNDHTAFRVDWMPFAGRRQSGYG 436
|
Uncharacterized aldehyde dehydrogenase (locus RL0313) with sequence similarity to the moss Tortula ruralis aldehyde dehydrogenase ALDH21A1 (RNP123) believed to play an important role in the detoxification of aldehydes generated in response to desiccation- and salinity-stress, and similar sequences are included in this CD. Length = 455 |
| >gnl|CDD|181826 PRK09406, gabD1, succinic semialdehyde dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Score = 236 bits (605), Expect = 1e-73
Identities = 142/408 (34%), Positives = 206/408 (50%), Gaps = 16/408 (3%)
Query: 5 ADLIEEHVEELAALDALDAGKVYLRAKTAEIPGAAEFLRFFAGAADKIHGEVL------- 57
ADL+E +++AAL L+ GK AK AE A+ R++A H E L
Sbjct: 55 ADLLEAEADQVAALMTLEMGKTLASAK-AEALKCAKGFRYYAE-----HAEALLADEPAD 108
Query: 58 -KMSSELQGYTLREPVGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLTALY 116
+ Y +P+GVV ++PWNFP +PAL AG ++K A P TALY
Sbjct: 109 AAAVGASRAYVRYQPLGVVLAVMPWNFPLWQVVRFAAPALMAGNVGLLKHASNVPQTALY 168
Query: 117 YAHLAKLAGIPDGVLNVVPGFGPTAGAAICSHMDIDYVCFTGSTDVGRLVMQAAAASNLK 176
A L + AG PDG + G A AI + TGS GR V A A +K
Sbjct: 169 LADLFRRAGFPDGCFQTLL-VGSGAVEAILRDPRVAAATLTGSEPAGRAV-AAIAGDEIK 226
Query: 177 QVSLELGGKSPLLIFDDADLDTAADVALLGNLYNKGEICVASSRVFVQEGIYDKFEKKLL 236
+ LELGG P ++ ADLD AA+ A+ + N G+ C+A+ R V +YD F +K +
Sbjct: 227 KTVLELGGSDPFIVMPSADLDRAAETAVTARVQNNGQSCIAAKRFIVHADVYDAFAEKFV 286
Query: 237 EKAKAWLVGDPFDPTVRQGPQISERHFDRILSYIEHGKREGATLLTGGKPIGDKGYYIEP 296
+ A VGDP DP GP +E+ D + ++ GAT+L GGK G++ P
Sbjct: 287 ARMAALRVGDPTDPDTDVGPLATEQGRDEVEKQVDDAVAAGATILCGGKRPDGPGWFYPP 346
Query: 297 TIFTNVKEDMIIAKEEIFGPVMALMKFKTVEEAIKSANNTQYGLAAGIVTKDLNVANTVS 356
T+ T++ DM + EE+FGPV +L + ++EAI+ AN T +GL + T+D
Sbjct: 347 TVITDITPDMRLYTEEVFGPVASLYRVADIDEAIEIANATTFGLGSNAWTRDEAEQERFI 406
Query: 357 RSIRAGIIWINCYFGFSMDCPYGGYKMSGFGREYGLESLYKYLQIKSV 404
+ AG ++IN + P+GG K SG+GRE + ++ IK+V
Sbjct: 407 DDLEAGQVFINGMTVSYPELPFGGVKRSGYGRELSAHGIREFCNIKTV 454
|
Length = 457 |
| >gnl|CDD|143402 cd07083, ALDH_P5CDH, ALDH subfamily NAD+-dependent delta(1)-pyrroline-5-carboxylate dehydrogenase-like | Back alignment and domain information |
|---|
Score = 237 bits (605), Expect = 3e-73
Identities = 132/418 (31%), Positives = 219/418 (52%), Gaps = 22/418 (5%)
Query: 3 KFADLIEEHVEELAALDALDAGKVYLRAKTAEIPGAAEFLRFFAGAADKIHG---EVLKM 59
K ADL+ EL A + GK ++ A ++ A +F+R++A AA ++ EV+
Sbjct: 85 KAADLLRRRRRELIATLTYEVGKNWVEA-IDDVAEAIDFIRYYARAALRLRYPAVEVVPY 143
Query: 60 SSELQGYTLREPVGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLTALYYAH 119
E +G I PWNFP +F + +A G T+I KPAE +
Sbjct: 144 PGEDNESFYV-GLGAGVVISPWNFPVAIFTGMIVAPVAVGNTVIAKPAEDAVVVGYKVFE 202
Query: 120 LAKLAGIPDGVLNVVPGFGPTAGAAICSHMDIDYVCFTGSTDVGRLVMQAAA-----ASN 174
+ AG P GV+ +PG G GA + H I + FTGS + G+ + +AAA +
Sbjct: 203 IFHEAGFPPGVVQFLPGVGEEVGAYLTEHERIRGINFTGSLETGKKIYEAAARLAPGQTW 262
Query: 175 LKQVSLELGGKSPLLIFDDADLDTAADVALLGNLYNKGEICVASSRVFVQEGIYDKFEKK 234
K++ +E GGK+ +++ + AD + + ++ +G+ C A+SR+ + +G Y+ ++
Sbjct: 263 FKRLYVETGGKNAIIVDETADFELVVEGVVVSAFGFQGQKCSAASRLILTQGAYEPVLER 322
Query: 235 LLEKAKAWLVGDPFDPTVRQGPQISERHFDRILSYIEHGKREGATLLTGGKPIGDKGYYI 294
LL++A+ VG P + GP I ++LSYIEHGK EG L+ GGK + +GY++
Sbjct: 323 LLKRAERLSVGPPEENGTDLGPVIDAEQEAKVLSYIEHGKNEG-QLVLGGKRLEGEGYFV 381
Query: 295 EPTIFTNVKEDMIIAKEEIFGPVMALMKFKTVE--EAIKSANNTQYGLAAGIVTKDLNVA 352
PT+ V IA+EEIFGPV++++++K + EA++ AN+T YGL G+ ++
Sbjct: 382 APTVVEEVPPKARIAQEEIFGPVLSVIRYKDDDFAEALEVANSTPYGLTGGVYSRKREHL 441
Query: 353 NTVSRSIRAGIIWIN-----CYFGFSMDCPYGGYKMSGFG-REYGLESLYKYLQIKSV 404
R G ++IN G P+GG+K+SG + G L ++L++K+V
Sbjct: 442 EEARREFHVGNLYINRKITGALVGVQ---PFGGFKLSGTNAKTGGPHYLRRFLEMKAV 496
|
ALDH subfamily of the NAD+-dependent, delta(1)-pyrroline-5-carboxylate dehydrogenases (P5CDH, EC=1.5.1.12). The proline catabolic enzymes, proline dehydrogenase and P5CDH catalyze the two-step oxidation of proline to glutamate. P5CDH catalyzes the oxidation of glutamate semialdehyde, utilizing NAD+ as the electron acceptor. In some bacteria, the two enzymes are fused into the bifunctional flavoenzyme, proline utilization A (PutA). These enzymes play important roles in cellular redox control, superoxide generation, and apoptosis. In certain prokaryotes such as Escherichia coli, PutA is also a transcriptional repressor of the proline utilization genes. Monofunctional enzyme sequences such as those seen in the Bacillus RocA P5CDH are also present in this subfamily as well as the human ALDH4A1 P5CDH and the Drosophila Aldh17 P5CDH. Length = 500 |
| >gnl|CDD|143443 cd07125, ALDH_PutA-P5CDH, Delta(1)-pyrroline-5-carboxylate dehydrogenase, PutA | Back alignment and domain information |
|---|
Score = 229 bits (586), Expect = 4e-70
Identities = 134/400 (33%), Positives = 203/400 (50%), Gaps = 27/400 (6%)
Query: 3 KFADLIEEHVEELAALDALDAGKVYLRAKTAEIPGAAEFLRFFAGAADKIHGEVLKMS-- 60
K ADL+E + EL AL A +AGK L AE+ A +F R++A A ++ +
Sbjct: 99 KAADLLEANRGELIALAAAEAGKT-LADADAEVREAIDFCRYYAAQARELFSDPELPGPT 157
Query: 61 SELQGYTLREPVGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLTALYYAHL 120
EL G L GV I PWNFP +F +++ ALAAG T+I KPAEQTPL A A
Sbjct: 158 GELNGLEL-HGRGVFVCISPWNFPLAIFTGQIAAALAAGNTVIAKPAEQTPLIA---ARA 213
Query: 121 AKL---AGIPDGVLNVVPGFGPTAGAAICSHMDIDYVCFTGSTDVGRLVMQAAAASNLKQ 177
+L AG+P VL +VPG G G A+ +H ID V FTGST+ +L+ +A A +
Sbjct: 214 VELLHEAGVPRDVLQLVPGDGEEIGEALVAHPRIDGVIFTGSTETAKLINRALAERDGPI 273
Query: 178 VSL--ELGGKSPLLIFDDADLDTAADVALLGNLYNKGEICVASSRVFVQEGIYDKFEKKL 235
+ L E GGK+ +++ A + A + + G+ C A +++QE I ++F + L
Sbjct: 274 LPLIAETGGKNAMIVDSTALPEQAVKDVVQSAFGSAGQRCSALRLLYLQEEIAERFIEML 333
Query: 236 LEKAKAWLVGDPFDPTVRQGPQISERHFDRILSYIEHGKREGATLLTGGKPIGDKGYYIE 295
+ VGDP+D + GP I + + ++ E + E A L+ GY++
Sbjct: 334 KGAMASLKVGDPWDLSTDVGPLIDKPAGKLLRAHTELMRGE-AWLIAPAPLDDGNGYFVA 392
Query: 296 PTIFTNVKEDMIIAKEEIFGPVMALMKFK--TVEEAIKSANNTQYGLAAGIVTKDLNVAN 353
P I V + E+FGP++ +++FK ++EAI+ N T YGL GI ++D
Sbjct: 393 PGIIEIVGIFDL--TTEVFGPILHVIRFKAEDLDEAIEDINATGYGLTLGIHSRDEREIE 450
Query: 354 TVSRSIRAGIIWINCYFGFSMDC------PYGGYKMSGFG 387
+ AG N Y ++ P+GG+ +SG G
Sbjct: 451 YWRERVEAG----NLYINRNITGAIVGRQPFGGWGLSGTG 486
|
The proline catabolic enzymes of the aldehyde dehydrogenase (ALDH) protein superfamily, proline dehydrogenase and Delta(1)-pyrroline-5-carboxylate dehydrogenase (P5CDH, (EC=1.5.1.12 )), catalyze the two-step oxidation of proline to glutamate; P5CDH catalyzes the oxidation of glutamate semialdehyde, utilizing NAD+ as the electron acceptor. In some bacteria, the two enzymes are fused into the bifunctional flavoenzyme, proline utilization A (PutA) These enzymes play important roles in cellular redox control, superoxide generation, and apoptosis. In certain prokaryotes such as Escherichia coli, PutA is also a transcriptional repressor of the proline utilization genes. Length = 518 |
| >gnl|CDD|143406 cd07087, ALDH_F3-13-14_CALDH-like, ALDH subfamily: Coniferyl aldehyde dehydrogenase, ALDH families 3, 13, and 14, and other related proteins | Back alignment and domain information |
|---|
Score = 223 bits (570), Expect = 1e-68
Identities = 119/351 (33%), Positives = 188/351 (53%), Gaps = 25/351 (7%)
Query: 64 QGYTLREPVGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLTALYYAHLAKL 123
+ Y + EP+GVV I PWN+P + + A+AAG T+++KP+E P T+ A LAKL
Sbjct: 93 KAYVIPEPLGVVLIIGPWNYPLQLALAPLIGAIAAGNTVVLKPSELAPATS---ALLAKL 149
Query: 124 AG--IPDGVLNVVPGFGPTAGAAICSHMDIDYVCFTGSTDVGRLVMQAAAASNLKQVSLE 181
+ VV G A A+ + D++ FTGS VG++VM+AAA +L V+LE
Sbjct: 150 IPKYFDPEAVAVVEGGVEVA-TALLAE-PFDHIFFTGSPAVGKIVMEAAAK-HLTPVTLE 206
Query: 182 LGGKSPLLIFDDADLDTAADVALLGNLYNKGEICVASSRVFVQEGIYDKFEKKLLEKAKA 241
LGGKSP ++ DA+L+ AA G N G+ C+A V V E I D+ ++L + K
Sbjct: 207 LGGKSPCIVDKDANLEVAARRIAWGKFLNAGQTCIAPDYVLVHESIKDELIEELKKAIKE 266
Query: 242 WLVGDPFDPTVRQGPQ----ISERHFDRILSYIEHGKREGATLLTGGKPIGDKGYYIEPT 297
+ DP ++ P I+ERHFDR+ S ++ GK ++ GG+ + + YI PT
Sbjct: 267 FYGEDP-----KESPDYGRIINERHFDRLASLLDDGK-----VVIGGQ-VDKEERYIAPT 315
Query: 298 IFTNVKEDMIIAKEEIFGPVMALMKFKTVEEAIKSANNTQYGLAAGIVTKDLNVANTVSR 357
I +V D + +EEIFGP++ ++ + ++EAI+ N+ LA + ++D V V
Sbjct: 316 ILDDVSPDSPLMQEEIFGPILPILTYDDLDEAIEFINSRPKPLALYLFSEDKAVQERVLA 375
Query: 358 SIRAGIIWIN-CYFGFSMD-CPYGGYKMSGFGREYGLESLYKYLQIKSVVT 406
+G + +N ++ P+GG SG G +G + +KSV+
Sbjct: 376 ETSSGGVCVNDVLLHAAIPNLPFGGVGNSGMGAYHGKAGFDTFSHLKSVLK 426
|
ALDH subfamily which includes NAD(P)+-dependent, aldehyde dehydrogenase, family 3 member A1 and B1 (ALDH3A1, ALDH3B1, EC=1.2.1.5) and fatty aldehyde dehydrogenase, family 3 member A2 (ALDH3A2, EC=1.2.1.3), and also plant ALDH family members ALDH3F1, ALDH3H1, and ALDH3I1, fungal ALDH14 (YMR110C) and the protozoan family 13 member (ALDH13), as well as coniferyl aldehyde dehydrogenases (CALDH, EC=1.2.1.68), and other similar sequences, such as the Pseudomonas putida benzaldehyde dehydrogenase I that is involved in the metabolism of mandelate. Length = 426 |
| >gnl|CDD|143414 cd07095, ALDH_SGSD_AstD, N-succinylglutamate 5-semialdehyde dehydrogenase, AstD-like | Back alignment and domain information |
|---|
Score = 220 bits (564), Expect = 8e-68
Identities = 126/390 (32%), Positives = 197/390 (50%), Gaps = 9/390 (2%)
Query: 3 KFADLIEEHVEELAALDALDAGKVYLRAKTAEIPGAAEFLRFFAGAADKIHGEVLKMSSE 62
+FA+L++ + EELA L + + GK A+T E+ A + A + GE ++
Sbjct: 30 RFAELLKANKEELARLISRETGKPLWEAQT-EVAAMAGKIDISIKAYHERTGERATPMAQ 88
Query: 63 LQGYTLREPVGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLTALYYAHLAK 122
+ P GV+ P+NFP + + PAL AG T++ KP+E TP A L +
Sbjct: 89 GRAVLRHRPHGVMAVFGPFNFPGHLPNGHIVPALLAGNTVVFKPSELTPAVAELMVELWE 148
Query: 123 LAGIPDGVLNVVPGFGPTAGAAICSHMDIDYVCFTGSTDVGRLVMQAAAASNLKQVSLEL 182
AG+P GVLN+V G G G A+ +H ID + FTGS G L+ + A K ++LE+
Sbjct: 149 EAGLPPGVLNLVQG-GRETGEALAAHEGIDGLLFTGSAATGLLLHRQFAGRPGKILALEM 207
Query: 183 GGKSPLLIFDDADLDTAADVALLGNLYNKGEICVASSRVFVQEGIY-DKFEKKLLEKAKA 241
GG +PL+++D AD+D AA + + G+ C + R+ V +G D F ++L+E AK
Sbjct: 208 GGNNPLVVWDVADIDAAAYLIVQSAFLTAGQRCTCARRLIVPDGAVGDAFLERLVEAAKR 267
Query: 242 WLVGDPFDPTVRQGPQISERHFDRILSYIEHGKREGATLLTGGKPIGDKGYYIEPTIF-- 299
+G P GP I R L + G L + + ++ P I
Sbjct: 268 LRIGAPDAEPPFMGPLIIAAAAARYLLAQQDLLALGGEPLLAMERLVAGTAFLSPGIIDV 327
Query: 300 TNVKEDMIIAKEEIFGPVMALMKFKTVEEAIKSANNTQYGLAAGIVTKDLNVANTVSRSI 359
T+ + + EEIFGP++ + ++ +EAI AN T++GL+AG+++ D + I
Sbjct: 328 TDAAD---VPDEEIFGPLLQVYRYDDFDEAIALANATRFGLSAGLLSDDEALFERFLARI 384
Query: 360 RAGII-WINCYFGFSMDCPYGGYKMSGFGR 388
RAGI+ W G S P+GG +SG R
Sbjct: 385 RAGIVNWNRPTTGASSTAPFGGVGLSGNHR 414
|
N-succinylglutamate 5-semialdehyde dehydrogenase or succinylglutamic semialdehyde dehydrogenase (SGSD, E. coli AstD, EC=1.2.1.71) involved in L-arginine degradation via the arginine succinyltransferase (AST) pathway and catalyzes the NAD+-dependent reduction of succinylglutamate semialdehyde into succinylglutamate. Length = 431 |
| >gnl|CDD|130783 TIGR01722, MMSDH, methylmalonic acid semialdehyde dehydrogenase | Back alignment and domain information |
|---|
Score = 221 bits (564), Expect = 2e-67
Identities = 134/420 (31%), Positives = 207/420 (49%), Gaps = 24/420 (5%)
Query: 1 MWKFADLIEEHVEELAALDALDAGKVYLRAKTAEIPGAAEFLRFFAGAADKIHGEVL-KM 59
+ ++ L++EH +E+A L + GK + A ++ E + G + GE ++
Sbjct: 66 LLRYQALLKEHRDEIAELITAEHGKTHSDAL-GDVARGLEVVEHACGVNSLLKGETSTQV 124
Query: 60 SSELQGYTLREPVGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLTALYYAH 119
++ + Y++R+P+GV I P+NFP + A+A G T ++KP+E+ P A+ A
Sbjct: 125 ATRVDVYSIRQPLGVCAGITPFNFPAMIPLWMFPIAIACGNTFVLKPSEKVPSAAVKLAE 184
Query: 120 LAKLAGIPDGVLNVVPGFGPTAGAAICSHMDIDYVCFTGSTDVGRLVMQAAAASNLKQVS 179
L AG PDGVLNVV G A + H D+ V F GST +GR + +A K+V
Sbjct: 185 LFSEAGAPDGVLNVVHG-DKEAVDRLLEHPDVKAVSFVGSTPIGRYIHTTGSAHG-KRVQ 242
Query: 180 LELGGKSPLLIFDDADLDTAADVALLGNLYNKGEICVASSRVFVQEGIYDKFEKKLLEKA 239
G K+ +++ DAD D AAD + G+ C+A S V G D++ ++ E+A
Sbjct: 243 ALGGAKNHMVVMPDADKDAAADALVGAAYGAAGQRCMAISAA-VLVGAADEWVPEIRERA 301
Query: 240 KAWLVGDPFDPTVRQGPQISERHFDRILSYIEHGKREGATLLTGGKPIGDKGY----YIE 295
+ +G DP GP I+ + DR+ S I G EGA +L G+ GY ++
Sbjct: 302 EKIRIGPGDDPGAEMGPLITPQAKDRVASLIAGGAAEGAEVLLDGRGYKVDGYEEGNWVG 361
Query: 296 PTIFTNVKEDMIIAKEEIFGPVMALMKFKTVEEAIKSANNTQYGLAAGIVTKDLNVANTV 355
PT+ V M +EEIFGPV+ +++ T+EEAI N + YG I T+D A
Sbjct: 362 PTLLERVPPTMKAYQEEIFGPVLCVLEADTLEEAIALINASPYGNGTAIFTRDGAAARRF 421
Query: 356 SRSIRAGIIWINC-------YFGFSMDCPYGGYKMSGFG--REYGLESLYKYLQIKSVVT 406
I G + +N YF F G+K S FG YG + + Y + K+V T
Sbjct: 422 QHEIEVGQVGVNVPIPVPLPYFSF------TGWKDSFFGDHHIYGKQGTHFYTRGKTVTT 475
|
Involved in valine catabolism, methylmalonate-semialdehyde dehydrogenase catalyzes the irreversible NAD+- and CoA-dependent oxidative decarboxylation of methylmalonate semialdehyde to propionyl-CoA. Methylmalonate-semialdehyde dehydrogenase has been characterized in both prokaryotes and eukaryotes, functioning as a mammalian tetramer and a bacterial homodimer. Although similar in monomeric molecular mass and enzymatic activity, the N-terminal sequence in P.aeruginosa does not correspond with the N-terminal sequence predicted for rat liver. Sequence homology to a variety of prokaryotic and eukaryotic aldehyde dehydrogenases places MMSDH in the aldehyde dehydrogenase (NAD+) superfamily (pfam00171), making MMSDH's CoA requirement unique among known ALDHs. Methylmalonate semialdehyde dehydrogenase is closely related to betaine aldehyde dehydrogenase, 2-hydroxymuconic semialdehyde dehydrogenase, and class 1 and 2 aldehyde dehydrogenase. In Bacillus, a highly homologous protein to methylmalonic acid semialdehyde dehydrogenase, groups out from the main MMSDH clade with Listeria and Sulfolobus. This Bacillus protein has been suggested to be located in an iol operon and/or involved in myo-inositol catabolism, converting malonic semialdehyde to acetyl CoA ad CO2. The preceeding enzymes responsible for valine catabolism are present in Bacillus, Listeria, and Sulfolobus [Energy metabolism, Amino acids and amines]. Length = 477 |
| >gnl|CDD|143448 cd07130, ALDH_F7_AASADH, NAD+-dependent alpha-aminoadipic semialdehyde dehydrogenase, ALDH family members 7A1 and 7B | Back alignment and domain information |
|---|
Score = 219 bits (559), Expect = 2e-66
Identities = 125/359 (34%), Positives = 182/359 (50%), Gaps = 25/359 (6%)
Query: 4 FADLIEEHVEELAALDALDAGKVYLRAKTAEIPGAAEFLRF-----FA-GAADKIHGEVL 57
D + + E L L +L+ GK+ E G E FA G + +++G
Sbjct: 65 IGDALRKKKEALGKLVSLEMGKIL-----PE--GLGEVQEMIDICDFAVGLSRQLYGLT- 116
Query: 58 KMSSELQGYTLRE---PVGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLTA 114
+ SE G+ + E P+GVVG I +NFP ++ + AL G ++ KP+ TPLTA
Sbjct: 117 -IPSERPGHRMMEQWNPLGVVGVITAFNFPVAVWGWNAAIALVCGNVVVWKPSPTTPLTA 175
Query: 115 LYYAHL----AKLAGIPDGVLNVVPGFGPTAGAAICSHMDIDYVCFTGSTDVGRLVMQAA 170
+ + + G+P + ++V G G G A+ + V FTGST VGR V QA
Sbjct: 176 IAVTKIVARVLEKNGLPGAIASLVCG-GADVGEALVKDPRVPLVSFTGSTAVGRQVGQAV 234
Query: 171 AASNLKQVSLELGGKSPLLIFDDADLDTAADVALLGNLYNKGEICVASSRVFVQEGIYDK 230
AA + LELGG + +++ +DADLD A L + G+ C + R+ V E IYD+
Sbjct: 235 AA-RFGRSLLELGGNNAIIVMEDADLDLAVRAVLFAAVGTAGQRCTTTRRLIVHESIYDE 293
Query: 231 FEKKLLEKAKAWLVGDPFDPTVRQGPQISERHFDRILSYIEHGKREGATLLTGGKPIGDK 290
++L + K +GDP D GP ++ D L+ IE K +G T+L GGK I
Sbjct: 294 VLERLKKAYKQVRIGDPLDDGTLVGPLHTKAAVDNYLAAIEEAKSQGGTVLFGGKVIDGP 353
Query: 291 GYYIEPTIFTNVKEDMIIAKEEIFGPVMALMKFKTVEEAIKSANNTQYGLAAGIVTKDL 349
G Y+EPTI D I KEE F P++ ++KF T+EEAI N GL++ I T DL
Sbjct: 354 GNYVEPTIVE-GLSDAPIVKEETFAPILYVLKFDTLEEAIAWNNEVPQGLSSSIFTTDL 411
|
Alpha-aminoadipic semialdehyde dehydrogenase (AASADH, EC=1.2.1.31), also known as ALDH7A1, Antiquitin-1, ALDH7B, or delta-1-piperideine-6-carboxylate dehydrogenase (P6CDH), is a NAD+-dependent ALDH. Human ALDH7A1 is involved in the pipecolic acid pathway of lysine catabolism, catalyzing the oxidation of alpha-aminoadipic semialdehyde to alpha-aminoadipate. Arabidopsis thaliana ALDH7B4 appears to be an osmotic-stress-inducible ALDH gene encoding a turgor-responsive or stress-inducible ALDH. The Streptomyces clavuligerus P6CDH appears to be involved in cephamycin biosynthesis, catalyzing the second stage of the two-step conversion of lysine to alpha-aminoadipic acid. The ALDH7A1 enzyme and others in this group have been observed as tetramers, yet the bacterial P6CDH enzyme has been reported as a monomer. Length = 474 |
| >gnl|CDD|143451 cd07133, ALDH_CALDH_CalB, Coniferyl aldehyde dehydrogenase-like | Back alignment and domain information |
|---|
Score = 217 bits (556), Expect = 2e-66
Identities = 121/337 (35%), Positives = 174/337 (51%), Gaps = 28/337 (8%)
Query: 70 EPVGVVGHIIPWNFPTTMFFMKVSP---ALAAGCTMIVKPAEQTPLTALYYAHLAKL--A 124
+P+GVVG I+PWN+P ++ + P ALAAG +++KP+E TP T+ A LA+L
Sbjct: 100 QPLGVVGIIVPWNYP---LYLALGPLIAALAAGNRVMIKPSEFTPRTS---ALLAELLAE 153
Query: 125 GIPDGVLNVVPGFGPTAGAAICSHMDIDYVCFTGSTDVGRLVMQAAAASNLKQVSLELGG 184
+ + VV G G AA S + D++ FTGST VGR VM+AAA NL V+LELGG
Sbjct: 154 YFDEDEVAVVTG-GADVAAAF-SSLPFDHLLFTGSTAVGRHVMRAAAE-NLTPVTLELGG 210
Query: 185 KSPLLIFDDADLDTAADVALLGNLYNKGEICVASSRVFVQEGIYDKFEKKLLEKAKAWLV 244
KSP +I DADL AA+ G L N G+ CVA V V E ++F
Sbjct: 211 KSPAIIAPDADLAKAAERIAFGKLLNAGQTCVAPDYVLVPEDKLEEFVAAAKAAVAK--- 267
Query: 245 GDPFDPTVRQGPQ----ISERHFDRILSYIEHGKREGATL--LTGGKPIGDKGYYIEPTI 298
PT+ P I+ERH+ R+ +E + +GA + L + PT+
Sbjct: 268 ---MYPTLADNPDYTSIINERHYARLQGLLEDARAKGARVIELNPAGEDFAATRKLPPTL 324
Query: 299 FTNVKEDMIIAKEEIFGPVMALMKFKTVEEAIKSANNTQYGLAAGIVTKDLNVANTVSRS 358
NV +DM + +EEIFGP++ ++ + +++EAI N LA +D + V R
Sbjct: 325 VLNVTDDMRVMQEEIFGPILPILTYDSLDEAIDYINARPRPLALYYFGEDKAEQDRVLRR 384
Query: 359 IRAGIIWIN-CYFGFSM-DCPYGGYKMSGFGREYGLE 393
+G + IN + D P+GG SG G +G E
Sbjct: 385 THSGGVTINDTLLHVAQDDLPFGGVGASGMGAYHGKE 421
|
Coniferyl aldehyde dehydrogenase (CALDH, EC=1.2.1.68) of Pseudomonas sp. strain HR199 (CalB) which catalyzes the NAD+-dependent oxidation of coniferyl aldehyde to ferulic acid, and similar sequences, are present in this CD. Length = 434 |
| >gnl|CDD|143452 cd07134, ALDH_AlkH-like, Pseudomonas putida Aldehyde dehydrogenase AlkH-like | Back alignment and domain information |
|---|
Score = 211 bits (539), Expect = 5e-64
Identities = 120/331 (36%), Positives = 173/331 (52%), Gaps = 20/331 (6%)
Query: 70 EPVGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLTALYYAHLAKLAGIPDG 129
EP GV I PWN+P + F + A+AAG T I+KP+E TP T+ A + + A D
Sbjct: 99 EPKGVCLIISPWNYPFNLAFGPLVSAIAAGNTAILKPSELTPHTSAVIAKIIREAFDEDE 158
Query: 130 VLNVVPGFGPTAGAAICSHMDIDYVCFTGSTDVGRLVMQAAAASNLKQVSLELGGKSPLL 189
V V G A A + + D++ FTGS VG++VM AAAA +L V+LELGGKSP +
Sbjct: 159 V-AVFEGDAEVAQALL--ELPFDHIFFTGSPAVGKIVM-AAAAKHLASVTLELGGKSPTI 214
Query: 190 IFDDADLDTAADVALLGNLYNKGEICVASSRVFVQEGIYDKFEKKLLEKAKAWLV---GD 246
+ + ADL AA G N G+ C+A VFV E + D F +E KA + G
Sbjct: 215 VDETADLKKAAKKIAWGKFLNAGQTCIAPDYVFVHESVKDAF----VEHLKAEIEKFYGK 270
Query: 247 PFDPTVRQGPQ----ISERHFDRILSYIEHGKREGATLLTGGKPIGDKGYYIEPTIFTNV 302
D + P +++RHFDR+ ++ +GA + GG+ YI PT+ TNV
Sbjct: 271 --DAARKASPDLARIVNDRHFDRLKGLLDDAVAKGAKVEFGGQ-FDAAQRYIAPTVLTNV 327
Query: 303 KEDMIIAKEEIFGPVMALMKFKTVEEAIKSANNTQYGLAAGIVTKDLNVANTVSRSIRAG 362
DM I +EEIFGPV+ ++ ++ ++E I+ N LA + +KD N V +G
Sbjct: 328 TPDMKIMQEEIFGPVLPIITYEDLDEVIEYINAKPKPLALYVFSKDKANVNKVLARTSSG 387
Query: 363 IIWIN-CYFGFS-MDCPYGGYKMSGFGREYG 391
+ +N F + P+GG SG G +G
Sbjct: 388 GVVVNDVVLHFLNPNLPFGGVNNSGIGSYHG 418
|
Aldehyde dehydrogenase AlkH (locus name P12693, EC=1.2.1.3) of the alkBFGHJKL operon that allows Pseudomonas putida to metabolize alkanes and the aldehyde dehydrogenase AldX of Bacillus subtilis (locus P46329, EC=1.2.1.3), and similar sequences, are present in this CD. Length = 433 |
| >gnl|CDD|143453 cd07135, ALDH_F14-YMR110C, Saccharomyces cerevisiae aldehyde dehydrogenase family 14 and related proteins | Back alignment and domain information |
|---|
Score = 210 bits (537), Expect = 9e-64
Identities = 117/330 (35%), Positives = 176/330 (53%), Gaps = 21/330 (6%)
Query: 69 REPVGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLTALYYAHLAKLAGIPD 128
+EP+GVV I PWN+P + + A+AAGCT+++KP+E TP TA A L +
Sbjct: 106 KEPLGVVLIIGPWNYPVLLALSPLVGAIAAGCTVVLKPSELTPHTAALLAELVP-KYLDP 164
Query: 129 GVLNVVPGFGPTAGAAICSHMDIDYVCFTGSTDVGRLVMQAAAASNLKQVSLELGGKSPL 188
VV G P A + D + +TGS VGR++ +AAA +L V+LELGGKSP+
Sbjct: 165 DAFQVVQGGVPETTALLEQKFD--KIFYTGSGRVGRIIAEAAA-KHLTPVTLELGGKSPV 221
Query: 189 LIFDDADLDTAADVALLGNLYNKGEICVASSRVFVQEGIYDKFEKKLLEKAKAWLVGDPF 248
++ +ADL+ AA L G N G+ICVA V V +YD+F +E+ K L D F
Sbjct: 222 IVTKNADLELAAKRILWGKFGNAGQICVAPDYVLVDPSVYDEF----VEELKKVL--DEF 275
Query: 249 DPTVRQGPQ-----ISERHFDRILSYIEHGKREGATLLTGGKPIGDKGYYIEPTIFTNVK 303
P ++ RHF+R+ S ++ K + ++ GG+ +I PTI ++V
Sbjct: 276 YPGGANASPDYTRIVNPRHFNRLKSLLDTTKGK---VVIGGEMDEAT-RFIPPTIVSDVS 331
Query: 304 EDMIIAKEEIFGPVMALMKFKTVEEAIKSANNTQYGLAAGIVTKDLNVANTVSRSIRAGI 363
D + EE+FGPV+ ++K ++EAIK N+ LA I T D + + + R+G
Sbjct: 332 WDDSLMSEELFGPVLPIIKVDDLDEAIKVINSRDTPLALYIFTDDKSEIDHILTRTRSGG 391
Query: 364 IWIN-CYFGFSMD-CPYGGYKMSGFGREYG 391
+ IN +D P+GG SG+G +G
Sbjct: 392 VVINDTLIHVGVDNAPFGGVGDSGYGAYHG 421
|
Aldehyde dehydrogenase family 14 (ALDH14), isolated mainly from the mitochondrial outer membrane of Saccharomyces cerevisiae (YMR110C) and most closely related to the plant and animal ALDHs and fatty ALDHs family 3 members, and similar fungal sequences, are present in this CD. Length = 436 |
| >gnl|CDD|143454 cd07136, ALDH_YwdH-P39616, Bacillus subtilis aldehyde dehydrogenase ywdH-like | Back alignment and domain information |
|---|
Score = 206 bits (527), Expect = 4e-62
Identities = 123/359 (34%), Positives = 185/359 (51%), Gaps = 45/359 (12%)
Query: 65 GYTLREPVGVVGHIIPWNFPTTMFFMKVSP---ALAAGCTMIVKPAEQTPLTALYYAHLA 121
Y EP GVV I PWN+P F + ++P A+AAG T ++KP+E TP T+ +A
Sbjct: 94 SYIYYEPYGVVLIIAPWNYP---FQLALAPLIGAIAAGNTAVLKPSELTPNTS---KVIA 147
Query: 122 KL--AGIPDGVLNVVPGFGPTAGAAICSHMDIDYVCFTGSTDVGRLVMQAAAASNLKQVS 179
K+ + + VV G + D Y+ FTGS VG++VM+AAA +L V+
Sbjct: 148 KIIEETFDEEYVAVVEGGVEENQELLDQKFD--YIFFTGSVRVGKIVMEAAA-KHLTPVT 204
Query: 180 LELGGKSPLLIFDDADLDTAADVALLGNLYNKGEICVASSRVFVQEGIYDKFEKKLLEKA 239
LELGGKSP ++ +DA+L AA + G N G+ CVA V V E + +KF K+L E+
Sbjct: 205 LELGGKSPCIVDEDANLKLAAKRIVWGKFLNAGQTCVAPDYVLVHESVKEKFIKELKEEI 264
Query: 240 KAWLVGDPFDPTVRQGPQ----ISERHFDRILSYIEHGKREGATLLTGGKPIGDKGYYIE 295
K + DP + P I+E+HFDR+ +++GK ++ GG + YIE
Sbjct: 265 KKFYGEDP-----LESPDYGRIINEKHFDRLAGLLDNGK-----IVFGGN-TDRETLYIE 313
Query: 296 PTIFTNVKEDMIIAKEEIFGPVMALMKFKTVEEAIKSANNTQYGLAAGIVTKDLNVANTV 355
PTI NV D + +EEIFGP++ ++ + T++EAI+ + LA + ++D V V
Sbjct: 314 PTILDNVTWDDPVMQEEIFGPILPVLTYDTLDEAIEIIKSRPKPLALYLFSEDKKVEKKV 373
Query: 356 SRSIRAGIIWINCYFGFSMDC---------PYGGYKMSGFGREYGLESLYKYLQIKSVV 405
++ G IN D P+GG SG G +G S + KS++
Sbjct: 374 LENLSFGGGCIN-------DTIMHLANPYLPFGGVGNSGMGSYHGKYSFDTFSHKKSIL 425
|
Uncharacterized Bacillus subtilis ywdH aldehyde dehydrogenase (locus P39616) most closely related to the ALDHs and fatty ALDHs of families 3 and 14, and similar sequences, are included in this CD. Length = 449 |
| >gnl|CDD|184426 PRK13968, PRK13968, putative succinate semialdehyde dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 200 bits (511), Expect = 9e-60
Identities = 134/403 (33%), Positives = 195/403 (48%), Gaps = 15/403 (3%)
Query: 8 IEEHVEELAALDALDAGKVYLRAKTAEIPGAAEFLRFFAGAADKIHG-EVLKMSSEL--- 63
+ EE+A + + GK +A+ AE+ +A ++A HG +LK L
Sbjct: 64 LRARSEEMAQMITREMGKPINQAR-AEVAKSANLCDWYAE-----HGPAMLKAEPTLVEN 117
Query: 64 -QGYTLREPVGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLTALYYAHLAK 122
Q P+G + I+PWNFP P L AG ++K A A A + K
Sbjct: 118 QQAVIEYRPLGTILAIMPWNFPLWQVMRGAVPILLAGNGYLLKHAPNVMGCAQLIAQVFK 177
Query: 123 LAGIPDGVLNVVPGFGPTAGAAICSHMDIDYVCFTGSTDVGRLV-MQAAAASNLKQVSLE 181
AGIP GV + I + I V TGS G + QA AA LK+ LE
Sbjct: 178 DAGIPQGVYGWLNADNDGVSQMI-NDSRIAAVTVTGSVRAGAAIGAQAGAA--LKKCVLE 234
Query: 182 LGGKSPLLIFDDADLDTAADVALLGNLYNKGEICVASSRVFVQEGIYDKFEKKLLEKAKA 241
LGG P ++ +DADL+ A A+ G N G++C A+ R ++EGI F ++ + A A
Sbjct: 235 LGGSDPFIVLNDADLELAVKAAVAGRYQNTGQVCAAAKRFIIEEGIASAFTERFVAAAAA 294
Query: 242 WLVGDPFDPTVRQGPQISERHFDRILSYIEHGKREGATLLTGGKPIGDKGYYIEPTIFTN 301
+GDP D GP D + +E EGA LL GG+ I G Y PT+ N
Sbjct: 295 LKMGDPRDEENALGPMARFDLRDELHHQVEATLAEGARLLLGGEKIAGAGNYYAPTVLAN 354
Query: 302 VKEDMIIAKEEIFGPVMALMKFKTVEEAIKSANNTQYGLAAGIVTKDLNVANTVSRSIRA 361
V +M +EE+FGPV A+ K E A++ AN++++GL+A I T D A ++ +
Sbjct: 355 VTPEMTAFREELFGPVAAITVAKDAEHALELANDSEFGLSATIFTTDETQARQMAARLEC 414
Query: 362 GIIWINCYFGFSMDCPYGGYKMSGFGREYGLESLYKYLQIKSV 404
G ++IN Y +GG K SGFGRE L+++ I++V
Sbjct: 415 GGVFINGYCASDARVAFGGVKKSGFGRELSHFGLHEFCNIQTV 457
|
Length = 462 |
| >gnl|CDD|181873 PRK09457, astD, succinylglutamic semialdehyde dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Score = 197 bits (502), Expect = 4e-58
Identities = 134/392 (34%), Positives = 200/392 (51%), Gaps = 18/392 (4%)
Query: 3 KFADLIEEHVEELAALDALDAGKVYLRAKTAEIPGAAEFLRFFAGAADKIHGEVLKMSSE 62
+FA L+EE+ EELA + A + GK A T E+ + A + GE SE
Sbjct: 67 RFAALLEENKEELAEVIARETGKPLWEAAT-EVTAMINKIAISIQAYHERTGEK---RSE 122
Query: 63 LQGYT--LR-EPVGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLTALYYAH 119
+ LR P GVV P+NFP + + PAL AG T++ KP+E TP A
Sbjct: 123 MADGAAVLRHRPHGVVAVFGPYNFPGHLPNGHIVPALLAGNTVVFKPSELTPWVAELTVK 182
Query: 120 LAKLAGIPDGVLNVVPGFGPTAGAAICSHMDIDYVCFTGSTDVGRLVMQAAAASNLKQVS 179
L + AG+P GVLN+V G G G A+ +H DID + FTGS + G L+ + A K ++
Sbjct: 183 LWQQAGLPAGVLNLVQG-GRETGKALAAHPDIDGLLFTGSANTGYLLHRQFAGQPEKILA 241
Query: 180 LELGGKSPLLIFDDADLDTAADVALLGNLYNKGEICVASSRVFVQEGIY-DKFEKKLLEK 238
LE+GG +PL+I + AD+D A + + + G+ C + R+ V +G D F +L+
Sbjct: 242 LEMGGNNPLVIDEVADIDAAVHLIIQSAFISAGQRCTCARRLLVPQGAQGDAFLARLVAV 301
Query: 239 AKAWLVGDPF-DPTVRQGPQISERHFDRILSYIEHGKREGA-TLLTGGKPIGDKGYYIEP 296
AK VG +P G ISE+ +++ G +LL + G + P
Sbjct: 302 AKRLTVGRWDAEPQPFMGAVISEQAAQGLVAAQAQLLALGGKSLLEMTQLQAGTGL-LTP 360
Query: 297 TIF--TNVKEDMIIAKEEIFGPVMALMKFKTVEEAIKSANNTQYGLAAGIVTKDLNVANT 354
I T V E + EE FGP++ ++++ +EAI+ ANNT++GL+AG+++ D +
Sbjct: 361 GIIDVTGVAE---LPDEEYFGPLLQVVRYDDFDEAIRLANNTRFGLSAGLLSDDREDYDQ 417
Query: 355 VSRSIRAGII-WINCYFGFSMDCPYGGYKMSG 385
IRAGI+ W G S P+GG SG
Sbjct: 418 FLLEIRAGIVNWNKPLTGASSAAPFGGVGASG 449
|
Length = 487 |
| >gnl|CDD|166060 PLN02419, PLN02419, methylmalonate-semialdehyde dehydrogenase [acylating] | Back alignment and domain information |
|---|
Score = 196 bits (498), Expect = 9e-57
Identities = 149/419 (35%), Positives = 209/419 (49%), Gaps = 26/419 (6%)
Query: 1 MWKFADLIEEHVEELAALDALDAGKVYLRAKTAEIPGAAEFLRFFAGAADKIHGEVL-KM 59
M KF +LI +++++LA + GK L+ +I E + G A GE L +
Sbjct: 179 MLKFQELIRKNMDKLAMNITTEQGKT-LKDSHGDIFRGLEVVEHACGMATLQMGEYLPNV 237
Query: 60 SSELQGYTLREPVGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLTALYYAH 119
S+ + Y++REP+GV I P+NFP + A+ G T I+KP+E+ P ++ A
Sbjct: 238 SNGVDTYSIREPLGVCAGICPFNFPAMIPLWMFPVAVTCGNTFILKPSEKDPGASVILAE 297
Query: 120 LAKLAGIPDGVLNVVPGFGPTAGAAICSHMDIDYVCFTGSTDVGRLVMQAAAASNLKQVS 179
LA AG+PDGVLN+V G T AIC DI V F GS G + AAA K++
Sbjct: 298 LAMEAGLPDGVLNIVHGTNDTVN-AICDDEDIRAVSFVGSNTAGMHIYARAAAKG-KRIQ 355
Query: 180 LELGGKSPLLIFDDADLDTAADVALLGNLYNKGEICVA-SSRVFVQEGIYDKFEKKLLEK 238
+G K+ L+ DA++D + L G+ C+A S+ VFV G +E KL+E+
Sbjct: 356 SNMGAKNHGLVLPDANIDATLNALLAAGFGAAGQRCMALSTVVFV--GDAKSWEDKLVER 413
Query: 239 AKAWLVGDPFDPTVRQGPQISERHFDRILSYIEHGKREGATLLTGGK----PIGDKGYYI 294
AKA V +P GP IS++ +RI I+ G +GA LL G+ P +KG +I
Sbjct: 414 AKALKVTCGSEPDADLGPVISKQAKERICRLIQSGVDDGAKLLLDGRDIVVPGYEKGNFI 473
Query: 295 EPTIFTNVKEDMIIAKEEIFGPVMALMKFKTVEEAIKSANNTQYGLAAGIVTKDLNVANT 354
PTI + V DM KEEIFGPV+ M+ + +EAI N +YG A I T A
Sbjct: 474 GPTILSGVTPDMECYKEEIFGPVLVCMQANSFDEAISIINKNKYGNGAAIFTSSGAAARK 533
Query: 355 VSRSIRAGIIWINC-------YFGFSMDCPYGGYKMSGFG--REYGLESLYKYLQIKSV 404
I AG I IN +F F+ G K S G YG + + QIK V
Sbjct: 534 FQMDIEAGQIGINVPIPVPLPFFSFT------GNKASFAGDLNFYGKAGVDFFTQIKLV 586
|
Length = 604 |
| >gnl|CDD|233325 TIGR01238, D1pyr5carbox3, delta-1-pyrroline-5-carboxylate dehydrogenase (PutA C-terminal domain) | Back alignment and domain information |
|---|
Score = 192 bits (490), Expect = 2e-56
Identities = 134/416 (32%), Positives = 194/416 (46%), Gaps = 36/416 (8%)
Query: 3 KFADLIEEHVEELAALDALDAGKVYLRAKTAEIPGAAEFLRFFAGAADKIHGEVLKMSSE 62
+ ADL+E H+ EL AL +AGK A AE+ A +F R++A + GE
Sbjct: 104 RLADLLELHMPELMALCVREAGKTIHNA-IAEVREAVDFCRYYAKQVRDVLGE------- 155
Query: 63 LQGYTLREPVGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLTALYYAHLAK 122
E GV I PWNFP +F ++S ALAAG T+I KPAEQT L A L +
Sbjct: 156 ----FSVESRGVFVCISPWNFPLAIFTGQISAALAAGNTVIAKPAEQTSLIAYRAVELMQ 211
Query: 123 LAGIPDGVLNVVPGFGPTAGAAICSHMDIDYVCFTGSTDVGRLVMQAAAASNLKQVSL-- 180
AG P G + ++PG G GAA+ S I V FTGST+V +L+ Q A V L
Sbjct: 212 EAGFPAGTIQLLPGRGADVGAALTSDPRIAGVAFTGSTEVAQLINQTLAQREDAPVPLIA 271
Query: 181 ELGGKSPLLIFDDADL--DTAADVALLGNLYNKGEICVASSRVFVQEGIYDKFEKKLLEK 238
E GG++ +I D L DV L + G+ C A + VQE + D+ +
Sbjct: 272 ETGGQNA-MIVDSTALPEQVVRDV-LRSAFDSAGQRCSALRVLCVQEDVADRVLTMIQGA 329
Query: 239 AKAWLVGDPFDPTVRQGPQISERHFDRILSYIEHGKREGAT---LLTGGKPIGDKGYYIE 295
+ VG P T GP I +L++IEH + L G ++
Sbjct: 330 MQELKVGVPHLLTTDVGPVIDAEAKQNLLAHIEHMSQTQKKIAQLTLDDSRACQHGTFVA 389
Query: 296 PTIFTNVKEDMIIAKEEIFGPVMALMKFKTVE--EAIKSANNTQYGLAAGIVTKDLNVAN 353
PT+F +D+ EE+FGPV+ ++++K E + + N T YGL G+ ++
Sbjct: 390 PTLFE--LDDIAELSEEVFGPVLHVVRYKARELDQIVDQINQTGYGLTMGVHSRIETTYR 447
Query: 354 TVSRSIRAGIIWINCYFGFSMDC------PYGGYKMSGFG-REYGLESLYKYLQIK 402
+ + R G NCY + P+GG +SG G + G LY+ Q++
Sbjct: 448 WIEKHARVG----NCYVNRNQVGAVVGVQPFGGQGLSGTGPKAGGPHYLYRLTQVQ 499
|
This model represents one of several related branches of delta-1-pyrroline-5-carboxylate dehydrogenase. Members of this branch are the C-terminal domain of the PutA bifunctional proline dehydrogenase / delta-1-pyrroline-5-carboxylate dehydrogenase [Energy metabolism, Amino acids and amines]. Length = 500 |
| >gnl|CDD|237017 PRK11904, PRK11904, bifunctional proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Score = 196 bits (502), Expect = 2e-55
Identities = 131/397 (32%), Positives = 197/397 (49%), Gaps = 60/397 (15%)
Query: 3 KFADLIEEHVEELAALDALDAGKVYLRAKTAEIPGAAEFLRFFAGAADKIHGEVLKMSSE 62
+ ADL+E + EL AL +AGK L+ AE+ A +F R++A A ++ G +
Sbjct: 615 RAADLLEANRAELIALCVREAGKT-LQDAIAEVREAVDFCRYYAAQARRLFGA----PEK 669
Query: 63 LQGYT-----LR-EPVGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLTALY 116
L G T LR GV I PWNFP +F +V+ ALAAG T+I KPAEQTPL A
Sbjct: 670 LPGPTGESNELRLHGRGVFVCISPWNFPLAIFLGQVAAALAAGNTVIAKPAEQTPLIAAE 729
Query: 117 YAHLAKLAGIPDGVLNVVPGFGPTAGAAICSHMDIDYVCFTGSTDVGRLVMQAAAASNLK 176
L AGIP VL ++PG G T GAA+ + I V FTGST+ R++ + AA +
Sbjct: 730 AVKLLHEAGIPKDVLQLLPGDGATVGAALTADPRIAGVAFTGSTETARIINRTLAARDGP 789
Query: 177 QVSL--ELGGKSPLLIFDDADLDTAA-------DVALLGNLYNKGEICVASS-------- 219
V L E GG++ +++ D+ A DV V S+
Sbjct: 790 IVPLIAETGGQNAMIV------DSTALPEQVVDDV-------------VTSAFRSAGQRC 830
Query: 220 ---RV-FVQEGIYDKFEKKLLEKAKAWLVGDPFDPTVRQGPQISERHFDRILSYIEHGKR 275
RV FVQE I D+ + L VGDP + GP I + ++IE KR
Sbjct: 831 SALRVLFVQEDIADRVIEMLKGAMAELKVGDPRLLSTDVGPVIDAEAKANLDAHIERMKR 890
Query: 276 EGATLLTGGKPIG-DKGYYIEPTIF--TNVKEDMIIAKEEIFGPVMALMKFKT--VEEAI 330
E L P G + G+++ PT F ++ + + E+FGP++ ++++K +++ I
Sbjct: 891 EARLLAQLPLPAGTENGHFVAPTAFEIDSISQ----LEREVFGPILHVIRYKASDLDKVI 946
Query: 331 KSANNTQYGLAAGIVTKDLNVANTVSRSIRAGIIWIN 367
+ N T YGL GI ++ A+ ++ +R G +++N
Sbjct: 947 DAINATGYGLTLGIHSRIEETADRIADRVRVGNVYVN 983
|
Length = 1038 |
| >gnl|CDD|240392 PTZ00381, PTZ00381, aldehyde dehydrogenase family protein; Provisional | Back alignment and domain information |
|---|
Score = 187 bits (477), Expect = 2e-54
Identities = 110/344 (31%), Positives = 169/344 (49%), Gaps = 13/344 (3%)
Query: 65 GYTLREPVGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLTA-LYYAHLAKL 123
Y + EP+GVV I WN+P + + ++ A+AAG T+++KP+E +P T+ L L K
Sbjct: 103 SYIIPEPLGVVLVIGAWNYPLNLTLIPLAGAIAAGNTVVLKPSELSPHTSKLMAKLLTKY 162
Query: 124 AGIPDGVLNVVPGFGPTAGAAICSHMDIDYVCFTGSTDVGRLVMQAAAASNLKQVSLELG 183
+ + V+ G G + D++ FTGS VG+LVMQAAA NL +LELG
Sbjct: 163 --LDPSYVRVIEG-GVEVTTELLKE-PFDHIFFTGSPRVGKLVMQAAA-ENLTPCTLELG 217
Query: 184 GKSPLLIFDDADLDTAADVALLGNLYNKGEICVASSRVFVQEGIYDKFEKKLLEKAKAWL 243
GKSP+++ +L AA G N G+ CVA V V I DKF + L E K +
Sbjct: 218 GKSPVIVDKSCNLKVAARRIAWGKFLNAGQTCVAPDYVLVHRSIKDKFIEALKEAIKEFF 277
Query: 244 VGDPFDPTVRQGPQISERHFDRILSYIEHGKREGATLLTGGKPIGDKGYYIEPTIFTNVK 303
DP ++E H R+ I K G ++ GG+ + + Y+ PTI N
Sbjct: 278 GEDPKKSE-DYSRIVNEFHTKRLAELI---KDHGGKVVYGGE-VDIENKYVAPTIIVNPD 332
Query: 304 EDMIIAKEEIFGPVMALMKFKTVEEAIKSANNTQYGLAAGIVTKDLNVANTVSRSIRAGI 363
D + +EEIFGP++ ++ ++ ++E ++ N+ LA +D V + +G
Sbjct: 333 LDSPLMQEEIFGPILPILTYENIDEVLEFINSRPKPLALYYFGEDKRHKELVLENTSSGA 392
Query: 364 IWIN-CYFGFSMD-CPYGGYKMSGFGREYGLESLYKYLQIKSVV 405
+ IN C F P+GG SG G +G + K V+
Sbjct: 393 VVINDCVFHLLNPNLPFGGVGNSGMGAYHGKYGFDTFSHPKPVL 436
|
Length = 493 |
| >gnl|CDD|132284 TIGR03240, arg_catab_astD, succinylglutamic semialdehyde dehydrogenase | Back alignment and domain information |
|---|
Score = 183 bits (466), Expect = 6e-53
Identities = 125/388 (32%), Positives = 194/388 (50%), Gaps = 10/388 (2%)
Query: 3 KFADLIEEHVEELAALDALDAGKVYLRAKTAEIPGAAEFLRFFAGAADKIHGEVLKMSSE 62
+FA L+EE E LA + A + GK +T E+ + A + GE +
Sbjct: 65 RFAALLEERKEALARVIARETGKPLWETRT-EVASMIGKVAISIKAYHERTGESENPMPD 123
Query: 63 LQGYTLREPVGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLTALYYAHLAK 122
+ P GVV P+NFP + + PAL AG T++ KP+E TP A L +
Sbjct: 124 GRAVLRHRPHGVVAVFGPYNFPGHLPNGHIVPALLAGNTVVFKPSELTPWVAEETVKLWE 183
Query: 123 LAGIPDGVLNVVPGFGPTAGAAICSHMDIDYVCFTGSTDVGRLVMQAAAASNLKQVSLEL 182
AG+P GVLN+V G G A+ +H DID + FTGS++ G L+ + A K ++LE+
Sbjct: 184 KAGLPAGVLNLVQG-ARETGVALAAHPDIDGLLFTGSSNTGHLLHRQFAGRPEKILALEM 242
Query: 183 GGKSPLLIFDDADLDTAADVALLGNLYNKGEICVASSRVFVQEGIY-DKFEKKLLEKAKA 241
GG +PL++ + AD+D A + + + G+ C + R+ V +G D F +L+E A+
Sbjct: 243 GGNNPLIVDEVADIDAAVHLIIQSAFISAGQRCTCARRLLVPDGAQGDAFLARLVEVAER 302
Query: 242 WLVGD-PFDPTVRQGPQISERHFDRILSYIEHGKREGATLLTGGKPIGDKGYYIEPTIF- 299
VG +P G IS + R+L+ G L + + + P I
Sbjct: 303 LTVGAWDAEPQPFMGAVISLQAAQRLLAAQAKLLALGGKSLLAMRQLDPGAALLTPGIID 362
Query: 300 -TNVKEDMIIAKEEIFGPVMALMKFKTVEEAIKSANNTQYGLAAGIVTKDLNVANTVSRS 358
T V E + EE FGP++ ++++ +EAI ANNT++GL+AG+++ D + +
Sbjct: 363 VTGVAE---LPDEEHFGPLLQVIRYDDFDEAIAIANNTRFGLSAGLLSDDRELYDRFLLE 419
Query: 359 IRAGII-WINCYFGFSMDCPYGGYKMSG 385
IRAGI+ W G S P+GG SG
Sbjct: 420 IRAGIVNWNKPLTGASSAAPFGGIGASG 447
|
Members of this protein family are succinylglutamic semialdehyde dehydrogenase (EC 1.2.1.71), the fourth enzyme in the arginine succinyltransferase (AST) pathway for arginine catabolism [Energy metabolism, Amino acids and amines]. Length = 484 |
| >gnl|CDD|226683 COG4230, COG4230, Delta 1-pyrroline-5-carboxylate dehydrogenase [Energy production and conversion] | Back alignment and domain information |
|---|
Score = 187 bits (477), Expect = 9e-53
Identities = 125/397 (31%), Positives = 197/397 (49%), Gaps = 31/397 (7%)
Query: 3 KFADLIEEHVEELAALDALDAGKVYLRAKTAEIPGAAEFLRFFAGAADKIHGEVLKMSSE 62
+ ADL+E + +L L +AGK A AE+ A +FLR++AG A G +
Sbjct: 180 RAADLMEAQMPQLMGLLVREAGKTLSNA-IAEVREAVDFLRYYAGQARDTFGNLT----- 233
Query: 63 LQGYTLREPVGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLTALYYAHLAK 122
P+G V I PWNFP +F +++ ALAAG +++ KPAEQTPL A L
Sbjct: 234 ------HRPLGPVVCISPWNFPLAIFTGQIAAALAAGNSVLAKPAEQTPLIAAQAVRLLH 287
Query: 123 LAGIPDGVLNVVPGFGPTAGAAICSHMDIDYVCFTGSTDVGRLVMQAAAASNLKQVSL-- 180
AG+P GVL ++PG G T GAA+ + + V FTGST+V RL+ + A + + L
Sbjct: 288 EAGVPPGVLQLLPGRGETVGAALTADARVAGVMFTGSTEVARLIQRQLAKRQGRPIPLIA 347
Query: 181 ELGGKSPLLIFDDADLDTAADVALLGNLYNKGEICVASSRVFVQEGIYDKFEKKLLEKAK 240
E GG++ +++ A + L + G+ C A + +QE + D+ +L+ A
Sbjct: 348 ETGGQNAMIVDSSALAEQVVADVLASAFDSAGQRCSALRVLCLQEDVADRI-LTMLKGAM 406
Query: 241 AWL-VGDPFDPTVRQGPQISERHFDRILSYIEHGKREGATLLTGGKPIGD-KGYYIEPTI 298
A L VG+P T GP I I +I+ + +G + P KG ++ PT+
Sbjct: 407 AELRVGNPDRLTTDVGPVIDAEAKANIEKHIQTMRSKGRLVHQAAAPNSLQKGTFVAPTL 466
Query: 299 F-TNVKEDMIIAKEEIFGPVMALMKFKT--VEEAIKSANNTQYGLAAGIVTKDLNVANTV 355
+++ + E+FGPV+ ++++K ++E I N T YGL G+ T+ V
Sbjct: 467 IELENLDEL---QREVFGPVLHVVRYKRDELDEVIDQINATGYGLTLGVHTRIDETIAHV 523
Query: 356 SRSIRAGIIWIN-----CYFGFSMDCPYGGYKMSGFG 387
+ AG +++N G P+GG +SG G
Sbjct: 524 TERAHAGNLYVNRNIVGAVVGVQ---PFGGEGLSGTG 557
|
Length = 769 |
| >gnl|CDD|237018 PRK11905, PRK11905, bifunctional proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Score = 186 bits (475), Expect = 8e-52
Identities = 132/384 (34%), Positives = 196/384 (51%), Gaps = 47/384 (12%)
Query: 3 KFADLIEEHVEELAALDALDAGKVYLRAKTAEIPGAAEFLRFFAGAADKIHGEVLKMSSE 62
+ ADL+E H+ EL AL +AGK A AE+ A +FLR++A A
Sbjct: 620 RAADLMEAHMPELFALAVREAGKTLANA-IAEVREAVDFLRYYAAQAR-----------R 667
Query: 63 LQGYTLREPVGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLTALYYAHLAK 122
L +P+G V I PWNFP +F +++ AL AG T++ KPAEQTPL A L
Sbjct: 668 LLNGPGHKPLGPVVCISPWNFPLAIFTGQIAAALVAGNTVLAKPAEQTPLIAARAVRLLH 727
Query: 123 LAGIPDGVLNVVPGFGPTAGAAICSHMDIDYVCFTGSTDVGRLVMQAAAASNLKQVSL-- 180
AG+P L ++PG G T GAA+ + I V FTGST+V RL+ + A + V L
Sbjct: 728 EAGVPKDALQLLPGDGRTVGAALVADPRIAGVMFTGSTEVARLIQRTLAKRSGPPVPLIA 787
Query: 181 ELGGKSPLLIFDD--------AD-LDTAADVALLGNLYNKGEICVASSRV-FVQEGIYDK 230
E GG++ +I D AD + +A D A G+ C A RV +QE + D+
Sbjct: 788 ETGGQNA-MIVDSSALPEQVVADVIASAFDSA--------GQRCSA-LRVLCLQEDVADR 837
Query: 231 FEKKLLEKAKAWL-VGDPFDPTVRQGPQISERHFDRILSYIEHGKREGATLLTGGKPIG- 288
+L+ A L +GDP+ + GP I I ++IE + G + P
Sbjct: 838 V-LTMLKGAMDELRIGDPWRLSTDVGPVIDAEAQANIEAHIEAMRAAGRLVHQLPLPAET 896
Query: 289 DKGYYIEPTIFTNVK--EDMIIAKEEIFGPVMALMKFKT--VEEAIKSANNTQYGLAAGI 344
+KG ++ PT+ + D+ + E+FGPV+ +++FK ++ I N T YGL G+
Sbjct: 897 EKGTFVAPTLI-EIDSISDL---EREVFGPVLHVVRFKADELDRVIDDINATGYGLTFGL 952
Query: 345 VTK-DLNVANTVSRSIRAGIIWIN 367
++ D +A+ SR IRAG I++N
Sbjct: 953 HSRIDETIAHVTSR-IRAGNIYVN 975
|
Length = 1208 |
| >gnl|CDD|215110 PLN00412, PLN00412, NADP-dependent glyceraldehyde-3-phosphate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 176 bits (449), Expect = 2e-50
Identities = 113/336 (33%), Positives = 169/336 (50%), Gaps = 9/336 (2%)
Query: 71 PVGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLTALYYAHLAKLAGIPDGV 130
P+GVV I P+N+P + K++PAL AG +++KP Q + AL+ H LAG P G+
Sbjct: 158 PLGVVLAIPPFNYPVNLAVSKIAPALIAGNAVVLKPPTQGAVAALHMVHCFHLAGFPKGL 217
Query: 131 LNVVPGFGPTAGAAICSHMDIDYVCFTGSTDVGRLVMQAAAASNLKQVSLELGGKSPLLI 190
++ V G G G + H ++ + FTG D G + + A L+ +ELGGK ++
Sbjct: 218 ISCVTGKGSEIGDFLTMHPGVNCISFTGG-DTGIAISKKAGMVPLQ---MELGGKDACIV 273
Query: 191 FDDADLDTAADVALLGNLYNKGEICVASSRVFVQEGIYDKFEKKLLEKAKAWLVGDPFDP 250
+DADLD AA + G G+ C A V V E + D +K+ K VG P D
Sbjct: 274 LEDADLDLAAANIIKGGFSYSGQRCTAVKVVLVMESVADALVEKVNAKVAKLTVGPPED- 332
Query: 251 TVRQGPQISERHFDRILSYIEHGKREGATLLTGGKPIGDKGYYIEPTIFTNVKEDMIIAK 310
P +SE + I + K +GAT K +G I P + NV+ DM IA
Sbjct: 333 DCDITPVVSESSANFIEGLVMDAKEKGATFCQEWK---REGNLIWPLLLDNVRPDMRIAW 389
Query: 311 EEIFGPVMALMKFKTVEEAIKSANNTQYGLAAGIVTKDLNVANTVSRSIRAGIIWINCYF 370
EE FGPV+ +++ +VEE I N + +GL + T+D+N A +S ++ G + IN
Sbjct: 390 EEPFGPVLPVIRINSVEEGIHHCNASNFGLQGCVFTRDINKAILISDAMETGTVQINSAP 449
Query: 371 GFSMD-CPYGGYKMSGFGREYGLESLYKYLQIKSVV 405
D P+ G K SG G + S+ ++KS V
Sbjct: 450 ARGPDHFPFQGLKDSGIGSQGITNSINMMTKVKSTV 485
|
Length = 496 |
| >gnl|CDD|143450 cd07132, ALDH_F3AB, Aldehyde dehydrogenase family 3 members A1, A2, and B1 and related proteins | Back alignment and domain information |
|---|
Score = 172 bits (439), Expect = 3e-49
Identities = 111/336 (33%), Positives = 176/336 (52%), Gaps = 29/336 (8%)
Query: 66 YTLREPVGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLTALYYAHLAKLAG 125
Y +EP+GVV I WN+P + + + A+AAG +++KP+E +P TA LA+L
Sbjct: 95 YIYKEPLGVVLIIGAWNYPLQLTLVPLVGAIAAGNCVVIKPSEVSPATAKL---LAEL-- 149
Query: 126 IPDGVLN----VVPGFGPTAGAAICSHMDIDYVCFTGSTDVGRLVMQAAAASNLKQVSLE 181
IP + VV G G + DY+ +TGST VG++VMQAAA +L V+LE
Sbjct: 150 IPKYLDKECYPVVLG-GVEETTELLKQ-RFDYIFYTGSTSVGKIVMQAAA-KHLTPVTLE 206
Query: 182 LGGKSPLLIFDDADLDTAADVALLGNLYNKGEICVASSRVFVQEGIYDKFEKKLLEKAKA 241
LGGKSP + D+D AA G N G+ C+A V + +KF + L + K
Sbjct: 207 LGGKSPCYVDKSCDIDVAARRIAWGKFINAGQTCIAPDYVLCTPEVQEKFVEALKKTLKE 266
Query: 242 WLVGDPFDPTVRQGPQ----ISERHFDRILSYIEHGKREGATLLTGGKPIGDKGYYIEPT 297
+ DP ++ P I++RHF R+ + GK + GG+ +K YI PT
Sbjct: 267 FYGEDP-----KESPDYGRIINDRHFQRLKKLLSGGK-----VAIGGQ-TDEKERYIAPT 315
Query: 298 IFTNVKEDMIIAKEEIFGPVMALMKFKTVEEAIKSANNTQYGLAAGIVTKDLNVANTVSR 357
+ T+VK + +EEIFGP++ ++ ++EAI+ N+ + LA + + + V N +
Sbjct: 316 VLTDVKPSDPVMQEEIFGPILPIVTVNNLDEAIEFINSREKPLALYVFSNNKKVINKILS 375
Query: 358 SIRAGIIWIN-CYFGFSMDC-PYGGYKMSGFGREYG 391
+ +G + +N +++D P+GG SG G +G
Sbjct: 376 NTSSGGVCVNDTIMHYTLDSLPFGGVGNSGMGAYHG 411
|
NAD(P)+-dependent, aldehyde dehydrogenase, family 3 members A1 and B1 (ALDH3A1, ALDH3B1, EC=1.2.1.5) and fatty aldehyde dehydrogenase, family 3 member A2 (ALDH3A2, EC=1.2.1.3), and similar sequences are included in this CD. Human ALDH3A1 is a homodimer with a critical role in cellular defense against oxidative stress; it catalyzes the oxidation of various cellular membrane lipid-derived aldehydes. Corneal crystalline ALDH3A1 protects the cornea and underlying lens against UV-induced oxidative stress. Human ALDH3A2, a microsomal homodimer, catalyzes the oxidation of long-chain aliphatic aldehydes to fatty acids. Human ALDH3B1 is highly expressed in the kidney and liver and catalyzes the oxidation of various medium- and long-chain saturated and unsaturated aliphatic aldehydes. Length = 443 |
| >gnl|CDD|143455 cd07137, ALDH_F3FHI, Plant aldehyde dehydrogenase family 3 members F1, H1, and I1 and related proteins | Back alignment and domain information |
|---|
Score = 166 bits (423), Expect = 3e-47
Identities = 109/331 (32%), Positives = 164/331 (49%), Gaps = 22/331 (6%)
Query: 70 EPVGVVGHIIPWNFPTTMFFMKVSP---ALAAGCTMIVKPAEQTPLTALYYAHLAKLAG- 125
EP+GVV I WNFP F + + P A+AAG +++KP+E P T+ A LAKL
Sbjct: 100 EPLGVVLVISAWNFP---FLLSLEPVIGAIAAGNAVVLKPSELAPATS---ALLAKLIPE 153
Query: 126 -IPDGVLNVVPGFGPTAGAAICSHMDIDYVCFTGSTDVGRLVMQAAAASNLKQVSLELGG 184
+ + V+ G G A+ D + FTGS VGR++M AAAA +L V+LELGG
Sbjct: 154 YLDTKAIKVIEG-GVPETTALLEQ-KWDKIFFTGSPRVGRIIM-AAAAKHLTPVTLELGG 210
Query: 185 KSPLLIFDDADLDTAADVALLGNL-YNKGEICVASSRVFVQEGIYDKFEKKLLEKAKAWL 243
K P+++ DL A G N G+ C+A V V+E L + +
Sbjct: 211 KCPVIVDSTVDLKVAVRRIAGGKWGCNNGQACIAPDYVLVEESFAPTLIDALKNTLEKFF 270
Query: 244 VGDPFDPTVRQGPQI-SERHFDRILSYIEHGKREGATLLTGGKPIGDKGYYIEPTIFTNV 302
+P + +I + HF R LS + ++ GG+ +K YIEPTI +
Sbjct: 271 GENPK--ESKDLSRIVNSHHFQR-LSRLLDDPSVADKIVHGGE-RDEKNLYIEPTILLDP 326
Query: 303 KEDMIIAKEEIFGPVMALMKFKTVEEAIKSANNTQYGLAAGIVTKDLNVANTVSRSIRAG 362
D I EEIFGP++ ++ K +EE+I+ N+ LAA + TK+ + + +G
Sbjct: 327 PLDSSIMTEEIFGPLLPIITVKKIEESIEIINSRPKPLAAYVFTKNKELKRRIVAETSSG 386
Query: 363 IIWIN-CYFGFSMD-CPYGGYKMSGFGREYG 391
+ N +++D P+GG SGFG +G
Sbjct: 387 GVTFNDTVVQYAIDTLPFGGVGESGFGAYHG 417
|
Aldehyde dehydrogenase family members 3F1, 3H1, and 3I1 (ALDH3F1, ALDH3H1, and ALDH3I1), and similar plant sequences, are in this CD. In Arabidopsis thaliana, stress-regulated expression of ALDH3I1 was observed in leaves and osmotic stress expression of ALDH3H1 was observed in root tissue, whereas, ALDH3F1 expression was not stress responsive. Functional analysis of ALDH3I1 suggest it may be involved in a detoxification pathway in plants that limits aldehyde accumulation and oxidative stress. Length = 432 |
| >gnl|CDD|177949 PLN02315, PLN02315, aldehyde dehydrogenase family 7 member | Back alignment and domain information |
|---|
Score = 168 bits (427), Expect = 4e-47
Identities = 125/408 (30%), Positives = 198/408 (48%), Gaps = 22/408 (5%)
Query: 6 DLIEEHVEELAALDALDAGKVYLRAKTAEIPGAAEFLRFFAGAADKIHGEVLKMSSELQG 65
D + ++ L L +L+ GK+ L E+ + F G + +++G ++ SE
Sbjct: 89 DALRAKLDYLGRLVSLEMGKI-LAEGIGEVQEIIDMCDFAVGLSRQLNGSII--PSERPN 145
Query: 66 YTLRE---PVGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLTAL----YYA 118
+ + E P+G+VG I +NFP + AL G ++ K A TPL + A
Sbjct: 146 HMMMEVWNPLGIVGVITAFNFPCAVLGWNACIALVCGNCVVWKGAPTTPLITIAMTKLVA 205
Query: 119 HLAKLAGIPDGVLNVVPGFGPTAGAAICSHMDIDYVCFTGSTDVGRLVMQAAAASNLKQV 178
+ + +P + G G G AI I V FTGS+ VG +V Q A K +
Sbjct: 206 EVLEKNNLPGAIFTSFCG-GAEIGEAIAKDTRIPLVSFTGSSKVGLMVQQTVNARFGKCL 264
Query: 179 SLELGGKSPLLIFDDADLDTAADVALLGNLYNKGEICVASSRVFVQEGIYDKFEKKLLEK 238
LEL G + +++ DDAD+ A L + G+ C R+ + E IYD ++LL
Sbjct: 265 -LELSGNNAIIVMDDADIQLAVRSVLFAAVGTAGQRCTTCRRLLLHESIYDDVLEQLLTV 323
Query: 239 AKAWLVGDPFDPTVRQGPQISERHFDRILSYIEHGKREGATLLTGGKPIGDKGYYIEPTI 298
K +GDP + GP + IE K +G +LTGG I +G +++PTI
Sbjct: 324 YKQVKIGDPLEKGTLLGPLHTPESKKNFEKGIEIIKSQGGKILTGGSAIESEGNFVQPTI 383
Query: 299 FTNVKEDMIIAKEEIFGPVMALMKFKTVEEAIKSANNTQYGLAAGIVTKDLNVANTVSRS 358
+ D + KEE+FGPV+ +MKFKT+EEAI+ N+ GL++ I T++ T+ +
Sbjct: 384 -VEISPDADVVKEELFGPVLYVMKFKTLEEAIEINNSVPQGLSSSIFTRN---PETIFKW 439
Query: 359 I-----RAGIIWINC-YFGFSMDCPYGGYKMSGFGREYGLESLYKYLQ 400
I GI+ +N G + +GG K +G GRE G +S +Y++
Sbjct: 440 IGPLGSDCGIVNVNIPTNGAEIGGAFGGEKATGGGREAGSDSWKQYMR 487
|
Length = 508 |
| >gnl|CDD|143441 cd07123, ALDH_F4-17_P5CDH, Delta(1)-pyrroline-5-carboxylate dehydrogenase, ALDH families 4 and 17 | Back alignment and domain information |
|---|
Score = 164 bits (418), Expect = 1e-45
Identities = 126/425 (29%), Positives = 198/425 (46%), Gaps = 69/425 (16%)
Query: 3 KFADLIE-EHVEELAALDALDAGK-VYLRAKTAEIPGAAE---FLRFFAGAADKI-HGEV 56
K ADL+ ++ EL A L GK V+ AEI A E FLRF A+++ +
Sbjct: 99 KAADLLSGKYRYELNAATMLGQGKNVW----QAEIDAACELIDFLRFNVKYAEELYAQQP 154
Query: 57 LKMSSELQGYTLREPV-GVVGHIIPWNF-------PTTMFFMKVSPALAAGCTMIVKPAE 108
L + + P+ G V + P+NF PAL G ++ KP++
Sbjct: 155 LSSPAGVWNRLEYRPLEGFVYAVSPFNFTAIGGNLAGA-------PALM-GNVVLWKPSD 206
Query: 109 QTPLTALYYAHLA-KL---AGIPDGVLNVVPGFGPTAGAAICSHMDIDYVCFTGSTDVGR 164
TA+ +L K+ AG+P GV+N VPG GP G + + + + FTGST +
Sbjct: 207 ----TAVLSNYLVYKILEEAGLPPGVINFVPGDGPVVGDTVLASPHLAGLHFTGSTPTFK 262
Query: 165 LVMQAAAASNLKQ------VSLELGGKSPLLIFDDADLDTAADVALLGNLYNKGEICVAS 218
+ NL + + E GGK+ L+ AD+D+ + G +G+ C A+
Sbjct: 263 S-LWKQIGENLDRYRTYPRIVGETGGKNFHLVHPSADVDSLVTATVRGAFEYQGQKCSAA 321
Query: 219 SRVFVQEGIYDKFEKKLLEKAKAWLVGDPFDPTVRQGPQISERHFDRILSYIEHGKRE-G 277
SR +V E ++ + +++LLE+ K +GDP D + G I E+ FDRI YI+H K +
Sbjct: 322 SRAYVPESLWPEVKERLLEELKEIKMGDPDDFSNFMGAVIDEKAFDRIKGYIDHAKSDPE 381
Query: 278 ATLLTGGKPIGDKGYYIEPTIF--TNVKEDMIIAKEEIFGPVMALM-----KFKTVEEAI 330
A ++ GGK GY++EPT+ T+ K ++ EEIFGPV+ + F+ E +
Sbjct: 382 AEIIAGGKCDDSVGYFVEPTVIETTDPKHKLM--TEEIFGPVLTVYVYPDSDFEETLELV 439
Query: 331 KSANNTQYGLAAGIVTKDLNVANTVSRSIR--AGIIWINCYFGFSMDC--------PYGG 380
+ + Y L I +D + ++R AG +IN P+GG
Sbjct: 440 DTT--SPYALTGAIFAQDRKAIREATDALRNAAGNFYIND------KPTGAVVGQQPFGG 491
Query: 381 YKMSG 385
+ SG
Sbjct: 492 ARASG 496
|
Delta(1)-pyrroline-5-carboxylate dehydrogenase (EC=1.5.1.12 ), families 4 and 17: a proline catabolic enzyme of the aldehyde dehydrogenase (ALDH) protein superfamily. Delta(1)-pyrroline-5-carboxylate dehydrogenase (P5CDH), also known as ALDH4A1 in humans, is a mitochondrial homodimer involved in proline degradation and catalyzes the NAD + -dependent conversion of P5C to glutamate. This is a necessary step in the pathway interconnecting the urea and tricarboxylic acid cycles. The preferred substrate is glutamic gamma-semialdehyde, other substrates include succinic, glutaric and adipic semialdehydes. Also included in this CD is the Aldh17 Drosophila melanogaster (Q9VUC0) P5CDH and similar sequences. Length = 522 |
| >gnl|CDD|233324 TIGR01236, D1pyr5carbox1, delta-1-pyrroline-5-carboxylate dehydrogenase, group 1 | Back alignment and domain information |
|---|
Score = 157 bits (398), Expect = 7e-43
Identities = 126/405 (31%), Positives = 188/405 (46%), Gaps = 29/405 (7%)
Query: 3 KFADLIE-EHVEELAALDALDAGK-VYLRAKTAEIPGAAE---FLRFFAGAADKIHGEV- 56
K ADL+ + E+ A L K VY AEI AE F RF A A +++ +
Sbjct: 99 KAADLLSGPYRAEILAATMLGQSKTVY----QAEIDAVAELIDFFRFNAKYARELYEQQP 154
Query: 57 LKMSSELQGYTLREPVGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLTALY 116
+ E R G V I P+NF + +PAL G T+I KP++ L+
Sbjct: 155 ISAPGEWNRTEYRPLEGFVYAISPFNFTAIAGNLAGAPALM-GNTVIWKPSDTAMLSNYL 213
Query: 117 YAHLAKLAGIPDGVLNVVPGFGPTAGAAICSHMDIDYVCFTGSTDV-GRLVMQAAAA--- 172
+ + AG+P GV+N VPG GP + + D+ + FTGST L Q A
Sbjct: 214 VMRILEEAGLPPGVINFVPGDGPLVSDTVLADPDLAGIHFTGSTPTFKHLWKQVAQNLDR 273
Query: 173 -SNLKQVSLELGGKSPLLIFDDADLDTAADVALLGNLYNKGEICVASSRVFVQEGIYDKF 231
N ++ E GGK ++ AD++ + G +G+ C A SR++V ++ +F
Sbjct: 274 YHNFPRIVGETGGKDFHVVHPSADVEHVVSGTIRGAFEYQGQKCSACSRLYVPHSLWPRF 333
Query: 232 EKKLLEKAKAWLVGDPFDPTVRQGPQISERHFDRILSYIEHGKR--EGATLLTGGKPIGD 289
+ +LL + VGDP D G I E+ F +I+ YIEH K T+L GGK
Sbjct: 334 KGRLLAELSRVKVGDPDDFGTFMGAVIDEKSFAKIVKYIEHAKSDPSALTILAGGKYDDS 393
Query: 290 KGYYIEPTIFTNVKEDMIIAKEEIFGPVMALM-----KFKTVEEAIKSANNTQYGLAAGI 344
GY++EPT+ + + KEEIFGPV+ + K+K + + + S T YGL +
Sbjct: 394 VGYFVEPTVVESKDPQEPLMKEEIFGPVLTVYVYPDDKYKEILDLVDST--TSYGLTGAV 451
Query: 345 VTKDLNVANTVSRSIR--AGIIWIN--CYFGFSMDCPYGGYKMSG 385
KD + + +R AG +IN P+GG + SG
Sbjct: 452 FAKDRDAILEADKVLRFAAGNFYINDKPTGAVVGQQPFGGARASG 496
|
This model represents one of two related branches of delta-1-pyrroline-5-carboxylate dehydrogenase. The two branches are not as closely related to each other as some aldehyde dehydrogenases are to this branch, and separate models are built for this reason. The enzyme is the second of two in the degradation of proline to glutamate [Energy metabolism, Amino acids and amines]. Length = 532 |
| >gnl|CDD|236989 PRK11809, putA, trifunctional transcriptional regulator/proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Score = 142 bits (360), Expect = 1e-36
Identities = 126/404 (31%), Positives = 199/404 (49%), Gaps = 44/404 (10%)
Query: 5 ADLIEEHVEELAALDALDAGKVYLRAKTAEIPGAAEFLRFFAGAADKIHGEVLKMSSELQ 64
ADL+E ++ L L +AGK + A AE+ A +FLR++AG +
Sbjct: 714 ADLMEAQMQTLMGLLVREAGKTFSNA-IAEVREAVDFLRYYAGQV----------RDDFD 762
Query: 65 GYTLREPVGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLTALYYAHLAKLA 124
T R P+G V I PWNFP +F +V+ ALAAG +++ KPAEQTPL A + A
Sbjct: 763 NDTHR-PLGPVVCISPWNFPLAIFTGQVAAALAAGNSVLAKPAEQTPLIAAQAVRILLEA 821
Query: 125 GIPDGVLNVVPGFGPTAGAAICSHMDIDYVCFTGSTDVGRLVMQAAAASNL----KQVSL 180
G+P GV+ ++PG G T GAA+ + + V FTGST+V RL +Q A L + + L
Sbjct: 822 GVPAGVVQLLPGRGETVGAALVADARVRGVMFTGSTEVARL-LQRNLAGRLDPQGRPIPL 880
Query: 181 --ELGGKSPLLIFDDADL--DTAADVALLGNLYNKGEICVASSRVFVQEGIYDKFEKKLL 236
E GG++ +I D + L ADV L + G+ C A + +Q+ + D+ K L
Sbjct: 881 IAETGGQNA-MIVDSSALTEQVVADV-LASAFDSAGQRCSALRVLCLQDDVADRTLKMLR 938
Query: 237 EKAKAWLVGDPFDPTVRQGPQISERHFDRILSYIEHGKREGATLLTGGKPIGDK---GYY 293
+G+P + GP I I +I+ + +G + + + G +
Sbjct: 939 GAMAECRMGNPDRLSTDIGPVIDAEAKANIERHIQAMRAKGRPVFQAARENSEDWQSGTF 998
Query: 294 IEPTI--FTNVKEDMIIAKEEIFGPVMALMKFK--TVEEAIKSANNTQYGLAAGIVTK-D 348
+ PT+ + E K E+FGPV+ ++++ ++E I+ N + YGL G+ T+ D
Sbjct: 999 VPPTLIELDSFDE----LKREVFGPVLHVVRYNRNQLDELIEQINASGYGLTLGVHTRID 1054
Query: 349 LNVANTVSRSIRAGIIWIN-----CYFGFSMDCPYGGYKMSGFG 387
+A V+ S G +++N G P+GG +SG G
Sbjct: 1055 ETIAQ-VTGSAHVGNLYVNRNMVGAVVGVQ---PFGGEGLSGTG 1094
|
Length = 1318 |
| >gnl|CDD|165847 PLN02203, PLN02203, aldehyde dehydrogenase | Back alignment and domain information |
|---|
Score = 136 bits (345), Expect = 8e-36
Identities = 112/355 (31%), Positives = 174/355 (49%), Gaps = 37/355 (10%)
Query: 70 EPVGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLTALYYAHLAKLAGIP-- 127
EP+GVV WNFP + + A+AAG +++KP+E P T+ + A A IP
Sbjct: 107 EPLGVVLIFSSWNFPIGLSLEPLIGAIAAGNAVVLKPSELAPATSAFLA-----ANIPKY 161
Query: 128 --DGVLNVVPGFGPTAGAAICSHMDIDYVCFTGSTDVGRLVMQAAAASNLKQVSLELGGK 185
+ V+ G GP G + H D + FTGS VGR++M AAA +L V+LELGGK
Sbjct: 162 LDSKAVKVIEG-GPAVGEQLLQH-KWDKIFFTGSPRVGRIIM-TAAAKHLTPVALELGGK 218
Query: 186 SPLLIFDDADLDTAADVA---LLGNLYN--KGEICVASSRVFVQEGIYDKFEKKLLEKAK 240
P I D VA ++G + G+ C+A V V+E +F L+E K
Sbjct: 219 CP-CIVDSLSSSRDTKVAVNRIVGGKWGSCAGQACIAIDYVLVEE----RFAPILIELLK 273
Query: 241 AWL---VGDPFDPTVRQGPQISERHFDRILSYIEHGKREGATLLTGGKPIGDKGYYIEPT 297
+ + G+ + ++++HF R+ + ++ R A+++ GG I +K +IEPT
Sbjct: 274 STIKKFFGENPRESKSMARILNKKHFQRLSNLLKD-PRVAASIVHGGS-IDEKKLFIEPT 331
Query: 298 IFTNVKEDMIIAKEEIFGPVMALMKFKTVEEAIKSANNTQYGLAAGIVTKDLN-----VA 352
I N D I EEIFGP++ ++ K +E++I N+ LA T + ++
Sbjct: 332 ILLNPPLDSDIMTEEIFGPLLPIITVKKIEDSIAFINSKPKPLAIYAFTNNEKLKRRILS 391
Query: 353 NTVSRSIRAGIIWINCYFGFSMDC-PYGGYKMSGFGREYGLESLYKYLQIKSVVT 406
T S S+ I ++ D P+GG SGFGR +G S + K+V+
Sbjct: 392 ETSSGSVTFNDAIIQ----YACDSLPFGGVGESGFGRYHGKYSFDTFSHEKAVLR 442
|
Length = 484 |
| >gnl|CDD|177831 PLN02174, PLN02174, aldehyde dehydrogenase family 3 member H1 | Back alignment and domain information |
|---|
Score = 112 bits (280), Expect = 5e-27
Identities = 98/342 (28%), Positives = 165/342 (48%), Gaps = 16/342 (4%)
Query: 70 EPVGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLTALYYAHLAKLAG--IP 127
EP+GVV I WN+P + V A++AG +++KP+E P ++ A LAKL +
Sbjct: 111 EPLGVVLVISAWNYPFLLSIDPVIGAISAGNAVVLKPSELAPASS---ALLAKLLEQYLD 167
Query: 128 DGVLNVVPGFGPTAGAAICSHMDIDYVCFTGSTDVGRLVMQAAAASNLKQVSLELGGKSP 187
+ VV G A + D + +TGS+ +GR++M AAAA +L V LELGGKSP
Sbjct: 168 SSAVRVVEGAVTETTALL--EQKWDKIFYTGSSKIGRVIM-AAAAKHLTPVVLELGGKSP 224
Query: 188 LLIFDDADLDTAADVALLGNL-YNKGEICVASSRVFVQEGIYDKFEKKLLEKAKAWLVGD 246
+++ D DL + G N G+ C++ + + K + ++ + + +
Sbjct: 225 VVVDSDTDLKVTVRRIIAGKWGCNNGQACISPDYILTTKEYAPKVIDAMKKELETFYGKN 284
Query: 247 PFDPTVRQGPQISERHFDRILSYIEHGKREGATLLTGGKPIGDKGYYIEPTIFTNVKEDM 306
P + + ++ HFDR LS + K ++ GG+ + I PTI +V D
Sbjct: 285 PME-SKDMSRIVNSTHFDR-LSKLLDEKEVSDKIVYGGEK-DRENLKIAPTILLDVPLDS 341
Query: 307 IIAKEEIFGPVMALMKFKTVEEAIKSANNTQYGLAAGIVTKDLNVANTVSRSIRAGIIWI 366
+I EEIFGP++ ++ +EE+ + LAA + T + + + ++ AG I +
Sbjct: 342 LIMSEEIFGPLLPILTLNNLEESFDVIRSRPKPLAAYLFTHNKKLKERFAATVSAGGIVV 401
Query: 367 N---CYFGFSMDCPYGGYKMSGFGREYGLESLYKYLQIKSVV 405
N + P+GG SG G +G S + K+V+
Sbjct: 402 NDIAVHLALHT-LPFGGVGESGMGAYHGKFSFDAFSHKKAVL 442
|
Length = 484 |
| >gnl|CDD|237016 PRK11903, PRK11903, aldehyde dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 105 bits (264), Expect = 1e-24
Identities = 81/297 (27%), Positives = 123/297 (41%), Gaps = 31/297 (10%)
Query: 73 GVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLTALYYAHLAKLAGI-PDGVL 131
GV I +NFP + K +PAL AG +IVKPA T AGI P G L
Sbjct: 150 GVALFINAFNFPAWGLWEKAAPALLAGVPVIVKPATATAWLTQRMVKDVVAAGILPAGAL 209
Query: 132 NVVPGFGPTAGAAICSHMD-IDYVCFTGSTDVGRL------VMQAAAASNLKQVSLELGG 184
+VV G + A + H+ D V FTGS + + V+Q + N++ SL
Sbjct: 210 SVVCG----SSAGLLDHLQPFDVVSFTGSAETAAVLRSHPAVVQRSVRVNVEADSLNSA- 264
Query: 185 KSPLLIFDDADLDTAADVALLGNLYNK-----GEICVASSRVFVQEGIYDKFEKKLLEKA 239
L+ DA + A + + + G+ C A R+FV E +YD + L +
Sbjct: 265 ----LLGPDAAPGSEAFDLFVKEVVREMTVKSGQKCTAIRRIFVPEALYDAVAEALAARL 320
Query: 240 KAWLVGDPFDPTVRQGPQISERHFDRILSYIEHGKREGATLLTGG---KPIG---DKGYY 293
VG+P + VR GP +S + + + R A +L G +
Sbjct: 321 AKTTVGNPRNDGVRMGPLVSRAQLAAVRAGLAA-LRAQAEVLFDGGGFALVDADPAVAAC 379
Query: 294 IEPTIFTNVKED--MIIAKEEIFGPVMALMKFKTVEEAIKSANNTQYGLAAGIVTKD 348
+ PT+ D + E+FGPV L+ ++ A+ A Q L A + + D
Sbjct: 380 VGPTLLGASDPDAATAVHDVEVFGPVATLLPYRDAAHALALARRGQGSLVASVYSDD 436
|
Length = 521 |
| >gnl|CDD|143403 cd07084, ALDH_KGSADH-like, ALDH subfamily: NAD(P)+-dependent alpha-ketoglutaric semialdehyde dehydrogenases and plant delta(1)-pyrroline-5-carboxylate dehydrogenase, ALDH family 12-like | Back alignment and domain information |
|---|
Score = 105 bits (262), Expect = 1e-24
Identities = 96/428 (22%), Positives = 161/428 (37%), Gaps = 39/428 (9%)
Query: 4 FADLIEE---HVEELAALDALDAGKVYLRAKTAEIPGAAEFLRFFAGAADKIH---GEVL 57
A +I+ ++AA L GK ++ A+ R F + +I G L
Sbjct: 27 LARIIQRLAAKSYDIAAGAVLVTGKGWMFAENICGDQVQLRARAFVIYSYRIPHEPGNHL 86
Query: 58 KMSSELQGYTLREPVGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLTALYY 117
+ Q + R P G V I +NFP + ++++ ALA G +IVKP +
Sbjct: 87 GQGLKQQSHGYRWPYGPVLVIGAFNFPLWIPLLQLAGALAMGNPVIVKPHTAVSIVMQIM 146
Query: 118 AHLAKLAGI-PDGVLNVVPGFGPTAGAAICSHMDIDYVCFTGSTDVGRLVMQAAAASNLK 176
L AG+ P + ++ G G T A+ H + V FTGS+ V A + K
Sbjct: 147 VRLLHYAGLLPPEDVTLINGDGKT-MQALLLHPNPKMVLFTGSSRVAE-----KLALDAK 200
Query: 177 Q--VSLELGGKSPLLIFDDADLDTAADVALLGNLYNK-GEICVASSRVFVQEGIYDKFEK 233
Q + LEL G + ++ DA + ++ G+ C A S +FV E + +
Sbjct: 201 QARIYLELAGFNWKVLGPDAQAVDYVAWQCVQDMTACSGQKCTAQSMLFVPE---NWSKT 257
Query: 234 KLLEKAKAWLVGDPFDPTVRQGPQISERHFDRILSYIEHGKREGATLLTGGKPIGDK--- 290
L+EK KA L+ + GP + I G+ LL GK + +
Sbjct: 258 PLVEKLKA-LLARRKLEDLLLGPVQTFTTLAMIAHMENLL---GSVLLFSGKELKNHSIP 313
Query: 291 ---GYYIEPTIFTNVKEDMIIAK---EEIFGPVMALMKFKTVEEA--IKSANNTQYGLAA 342
G + +F + E + + EEIFGP ++++K + A ++ L A
Sbjct: 314 SIYGACVASALFVPIDEILKTYELVTEEIFGPFAIVVEYKKDQLALVLELLERMHGSLTA 373
Query: 343 GIV-TKDLNVANTVSRSIRAGIIWINCYF---GFSMDCPYGGYKMSGFGRE-YGLESLYK 397
I + + + AG + GG G G E++
Sbjct: 374 AIYSNDPIFLQELIGNLWVAGRTYAILRGRTGVAPNQNHGGGPAADPRGAGIGGPEAIKL 433
Query: 398 YLQIKSVV 405
+ +
Sbjct: 434 VWRCHAEQ 441
|
ALDH subfamily which includes the NAD(P)+-dependent, alpha-ketoglutaric semialdehyde dehydrogenases (KGSADH, EC 1.2.1.26); plant delta(1)-pyrroline-5-carboxylate dehydrogenase (P5CDH, EC=1.5.1.12 ), ALDH family 12; the N-terminal domain of the MaoC (monoamine oxidase C) dehydratase regulatory protein; and orthologs of MaoC, PaaZ and PaaN, which are putative ring-opening enzymes of the aerobic phenylacetic acid catabolic pathway. Length = 442 |
| >gnl|CDD|143446 cd07128, ALDH_MaoC-N, N-terminal domain of the monoamine oxidase C dehydratase | Back alignment and domain information |
|---|
Score = 95.0 bits (237), Expect = 4e-21
Identities = 82/309 (26%), Positives = 128/309 (41%), Gaps = 40/309 (12%)
Query: 73 GVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLTALYYAHLAKL-------AG 125
GV HI +NFP K +PAL AG +IVKPA T A+L + +G
Sbjct: 146 GVAVHINAFNFPVWGMLEKFAPALLAGVPVIVKPATAT-------AYLTEAVVKDIVESG 198
Query: 126 I-PDGVLNVVPGFGPTAGAAICSHMDI-DYVCFTGSTDVG-RLVMQAAAASNLKQVSLEL 182
+ P+G L ++ G + + H+ D V FTGS +L + + + E
Sbjct: 199 LLPEGALQLICG----SVGDLLDHLGEQDVVAFTGSAATAAKLRAHPNIVARSIRFNAEA 254
Query: 183 GGKSPLLIFDDADLDTAADVALLGNLYNK-----GEICVASSRVFVQEGIYDKFEKKLLE 237
+ ++ DA T + + + G+ C A R FV E D + L
Sbjct: 255 DSLNAAILGPDATPGTPEFDLFVKEVAREMTVKAGQKCTAIRRAFVPEARVDAVIEALKA 314
Query: 238 KAKAWLVGDPFDPTVRQGPQISERHFDRILSYIEHGKREGATLLTGGKPI-------GDK 290
+ +VGDP VR GP +S + + + + A ++ GG +K
Sbjct: 315 RLAKVVVGDPRLEGVRMGPLVSREQREDVRAAVAT-LLAEAEVVFGGPDRFEVVGADAEK 373
Query: 291 GYYIEPTIFTNVKEDMIIAKE----EIFGPVMALMKFKTVEEAIKSANNTQYGLAAGIVT 346
G + PT+ + +D A E FGPV LM + ++ EAI+ A + L A +VT
Sbjct: 374 GAFFPPTLL--LCDDPDAATAVHDVEAFGPVATLMPYDSLAEAIELAARGRGSLVASVVT 431
Query: 347 KDLNVANTV 355
D A +
Sbjct: 432 NDPAFAREL 440
|
The N-terminal domain of the MaoC dehydratase, a monoamine oxidase regulatory protein. Orthologs of MaoC include PaaZ (Escherichia coli) and PaaN (Pseudomonas putida), which are putative ring-opening enzymes of the aerobic phenylacetic acid (PA) catabolic pathway. The C-terminal domain of MaoC has sequence similarity to enoyl-CoA hydratase. Also included in this CD is a novel Burkholderia xenovorans LB400 ALDH of the aerobic benzoate oxidation (box) pathway. This pathway involves first the synthesis of a CoA thio-esterified aromatic acid, with subsequent dihydroxylation and cleavage steps, yielding the CoA thio-esterified aliphatic aldehyde, 3,4-dehydroadipyl-CoA semialdehyde, which is further converted into its corresponding CoA acid by the Burkholderia LB400 ALDH. Length = 513 |
| >gnl|CDD|131331 TIGR02278, PaaN-DH, phenylacetic acid degradation protein paaN | Back alignment and domain information |
|---|
Score = 90.3 bits (224), Expect = 2e-19
Identities = 98/387 (25%), Positives = 145/387 (37%), Gaps = 33/387 (8%)
Query: 52 IHGEVLKMSSEL--QGYTLREPV-GVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAE 108
E +S + QG + P GV I +NFP K +PA AG + KPA
Sbjct: 122 PEDEFEPLSKDGSFQGRHILTPKGGVAVQINAFNFPVWGLLEKFAPAFLAGVPTLAKPAT 181
Query: 109 QTPLTALYYAHLAKLAGI-PDGVLNVVPGFGPTAGAAICSHMDI-DYVCFTGSTDVG-RL 165
T A +G+ P+G L ++ G +AG + H+D D V FTGS RL
Sbjct: 182 PTAYVAEALVRTMVESGLLPEGSLQLICG---SAG-DLLDHLDHRDVVAFTGSAATADRL 237
Query: 166 VMQAAAASNLKQVSLELGGKSPLLIFDDADLDTAADVALLGNLYNK-----GEICVASSR 220
+ + E + ++ +DA D + + G+ C A R
Sbjct: 238 RAHPNVLERGIRFNAEADSLNAAILGEDATPDEPEFDLFAQEIVRELTIKAGQKCTAIRR 297
Query: 221 VFVQEGIYDKFEKKLLEKAKAWLVGDPFDPTVRQGPQISERHFDRILSYIEHGKREGATL 280
V V + + + K L + ++GDP + V GP +S + + + GA +
Sbjct: 298 VIVPKALLEAVLKALQARLAKVVLGDPREEGVDMGPLVSLEQRADVEAAVAALLAAGAEV 357
Query: 281 LTGGKPIGDKGYYIEPTIFTNVKEDM-IIAKEEIFGPVMALMKFKTVEEAIKSANNTQYG 339
GG P G + PT+ + E FGPV + EA + A
Sbjct: 358 RLGG-PGRLDGAFFPPTLLLAEDPWAGAVHATEAFGPVATFFPYGDRAEAARLAARGGGS 416
Query: 340 LAAGIVTKDLNVANTVSRSIRA--GIIWI------NCYFGFSMDCP---YGGYKMSGFGR 388
L A + T D A + G + I G P +GG +G G
Sbjct: 417 LVATLATSDPEEARQFILGLAPYHGRLHILNRDDAAESTGHGSPLPRLLHGGPGRAGGGE 476
Query: 389 EY-GLESLYKYLQIKSVVTPIYNSPWL 414
E GL S+ Y+Q T I SPWL
Sbjct: 477 ELGGLRSVKHYMQ----RTAIQGSPWL 499
|
This enzyme is proposed to act in the ring-opening step of phenylacetic acid degradation which follows ligation of the acid with coenzyme A (by PaaF) and hydroxylation by a multicomponent non-heme iron hydroxylase complex (PaaGHIJK). Gene symbols have been standardized in. This enzyme is related to aldehyde dehydrogenases and has domains which are members of the pfam00171 and pfam01575 families. This family includes paaN genes from Pseudomonas, Sinorhizobium, Rhodopseudomonas, Escherichia, Deinococcus and Corynebacterium. Another homology family (TIGR02288) includes several other species. Length = 663 |
| >gnl|CDD|236931 PRK11563, PRK11563, bifunctional aldehyde dehydrogenase/enoyl-CoA hydratase; Provisional | Back alignment and domain information |
|---|
Score = 80.3 bits (199), Expect = 3e-16
Identities = 90/333 (27%), Positives = 132/333 (39%), Gaps = 68/333 (20%)
Query: 66 YTLREPVGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLTALYYAHLAKL-- 123
T E V V HI +NFP K++PA AG IVKPA T A+L +
Sbjct: 145 LTPLEGVAV--HINAFNFPVWGMLEKLAPAFLAGVPAIVKPATAT-------AYLTEAVV 195
Query: 124 -----AGI-PDGVLNVVPGFGPTAGAAICSHMDI-DYVCFTGSTDVGRL------VMQAA 170
+G+ P+G L ++ G +AG + H+D D V FTGS + V+ +
Sbjct: 196 RLIVESGLLPEGALQLICG---SAGD-LLDHLDGQDVVTFTGSAATAQKLRAHPNVVANS 251
Query: 171 AASNLKQVSLE---LGGKSPLLIFDDADLDTAADVALLGNLYNK----------GEICVA 217
+ SL LG DA T +L+ K G+ C A
Sbjct: 252 VPFTAEADSLNAAILG--------PDATPGTPE-----FDLFVKEVVREMTVKAGQKCTA 298
Query: 218 SSRVFVQEGIYDKFEKKLLEKAKAWLVGDPFDPTVRQGPQISERHFDRILSYIEHGKREG 277
R V + D + L + +VGDP VR G S + + +
Sbjct: 299 IRRAIVPRALVDAVIEALRARLAKVVVGDPRLEGVRMGALASLEQREDVREKVAALLAA- 357
Query: 278 ATLLTGGK----PIG---DKGYYIEPTIFTNVKEDMIIAKE----EIFGPVMALMKFKTV 326
A ++ GG +G +KG + PT+ +D + A E FGPV LM + +
Sbjct: 358 AEIVFGGPDSFEVVGADAEKGAFFPPTLLYC--DDPLEAPAVHDVEAFGPVSTLMPYDDL 415
Query: 327 EEAIKSANNTQYGLAAGIVTKDLNVANTVSRSI 359
+EAI+ A + L A +VT D VA +
Sbjct: 416 DEAIELAARGKGSLVASLVTADPEVARELVLGA 448
|
Length = 675 |
| >gnl|CDD|143447 cd07129, ALDH_KGSADH, Alpha-Ketoglutaric Semialdehyde Dehydrogenase | Back alignment and domain information |
|---|
Score = 73.0 bits (180), Expect = 5e-14
Identities = 77/286 (26%), Positives = 109/286 (38%), Gaps = 43/286 (15%)
Query: 71 PVGVVGHIIPWNFPTTMFFMKVS-----PALAAGCTMIVKPAEQTPLTALYYAHLA---- 121
PV V G NFP V+ ALAAGC ++VK P T+ A
Sbjct: 108 PVAVFG---ASNFP---LAFSVAGGDTASALAAGCPVVVKAHPAHPGTSELVARAIRAAL 161
Query: 122 KLAGIPDGVLNVVPGFGPTAGAAICSHMDIDYVCFTGSTDVGRLVMQAAAASNL-KQVSL 180
+ G+P GV +++ G G G A+ H I V FTGS GR + AAAA
Sbjct: 162 RATGLPAGVFSLLQGGGREVGVALVKHPAIKAVGFTGSRRGGRALFDAAAARPEPIPFYA 221
Query: 181 ELGGKSPLLIFDDADLDTAADVA-------LLGNLYNKGEICVASSRVFVQEGI-YDKFE 232
ELG +P+ I A + +A LG G+ C V V G D F
Sbjct: 222 ELGSVNPVFILPGALAERGEAIAQGFVGSLTLGA----GQFCTNPGLVLVPAGPAGDAFI 277
Query: 233 KKLLEKAKAWLVGDPFDPTVRQGPQISERHFDRILSYIEHGKREGATLLTGGKPIGDKGY 292
L E A P + + + + + + G +L GG + G
Sbjct: 278 AALAEALAAAPAQTMLTPGIAEA-------YRQGVEALA--AAPGVRVLAGG-AAAEGGN 327
Query: 293 YIEPTIFTNVKEDMIIAK----EEIFGPVMALMKFKTVEEAIKSAN 334
PT+F V +A EE+FGP ++++ E + A
Sbjct: 328 QAAPTLFK-VDAAAFLADPALQEEVFGPASLVVRYDDAAELLAVAE 372
|
Alpha-Ketoglutaric Semialdehyde (KGSA) Dehydrogenase (KGSADH, EC 1.2.1.26) catalyzes the NAD(P)+-dependent conversion of KGSA to alpha-ketoglutarate. This CD contains such sequences as those seen in Azospirillum brasilense, KGSADH-II (D-glucarate/D-galactarate-inducible) and KGSADH-III (hydroxy-L-proline-inducible). Both show similar high substrate specificity for KGSA and different coenzyme specificity; KGSADH-II is NAD+-dependent and KGSADH-III is NADP+-dependent. Also included in this CD is the NADP(+)-dependent aldehyde dehydrogenase from Vibrio harveyi which catalyzes the oxidation of long-chain aliphatic aldehydes to acids. Length = 454 |
| >gnl|CDD|143444 cd07126, ALDH_F12_P5CDH, Delta(1)-pyrroline-5-carboxylate dehydrogenase, ALDH family 12 | Back alignment and domain information |
|---|
Score = 67.5 bits (165), Expect = 4e-12
Identities = 97/376 (25%), Positives = 155/376 (41%), Gaps = 58/376 (15%)
Query: 23 AGKVYLRAKTAEIPGAAEFLRFFAGAADKIHGEVLKMSSELQGYT---LREPVGVVGHII 79
A K +A E+ +FL FAG + + + QG R P G V I
Sbjct: 92 APKSDAQAL-GEVVVTRKFLENFAGDQVRFLARSFNVPGDHQGQQSSGYRWPYGPVAIIT 150
Query: 80 PWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLTALYYAHLAKLAGIPDGVLNVVPGFGP 139
P+NFP + +++ AL G ++K + + + L L G+P ++++ GP
Sbjct: 151 PFNFPLEIPALQLMGALFMGNKPLLKVDSKVSVVMEQFLRLLHLCGMPATDVDLIHSDGP 210
Query: 140 TAGAAICSHMDIDYVCFTGSTDVGRLVMQAAAASNLKQVSLELGGKSPL---------LI 190
T I + FTGS+ V ++++LEL GK L L
Sbjct: 211 TMN-KILLEANPRMTLFTGSSKVA------------ERLALELHGKVKLEDAGFDWKILG 257
Query: 191 FDDADLDTAADVALLGNLYNKGEICVASSRVF-----VQEGIYDKFEKKLLEKAKAWLVG 245
D +D+D A G+ C A S +F VQ GI DK K L E+ K L
Sbjct: 258 PDVSDVDYVAWQCDQDAYACSGQKCSAQSILFAHENWVQAGILDKL-KALAEQRK--LED 314
Query: 246 DPFDPTVRQGPQISERHFDRILSYIEHGKREGATLLTGGKPIGDKGY-----YIEPT-IF 299
P + + H D++L+ GA +L GGKP+ + EPT +F
Sbjct: 315 LTIGPVLTWTTERILDHVDKLLAI------PGAKVLFGGKPLTNHSIPSIYGAYEPTAVF 368
Query: 300 TNVKEDMI-----IAKEEIFGPVMALMKFKTVEE--AIKSANNTQYGLAAGIVTKDLN-- 350
++E I + E+FGP + ++K + +++ L A +V+ D+
Sbjct: 369 VPLEEIAIEENFELVTTEVFGPFQVVTEYKDEQLPLVLEALERMHAHLTAAVVSNDIRFL 428
Query: 351 ---VANTVSRSIRAGI 363
+ANTV+ + AGI
Sbjct: 429 QEVLANTVNGTTYAGI 444
|
Delta(1)-pyrroline-5-carboxylate dehydrogenase (P5CDH, EC=1.5.1.12), family 12: a proline catabolic enzyme of the aldehyde dehydrogenase (ALDH) protein superfamily. P5CDH is a mitochondrial enzyme involved in proline degradation and catalyzes the NAD + -dependent conversion of P5C to glutamate. The P5CDH, ALDH12A1 gene, in Arabidopsis, has been identified as an osmotic-stress-inducible ALDH gene. This CD contains both Viridiplantae and Alveolata P5CDH sequences. Length = 489 |
| >gnl|CDD|143396 cd07077, ALDH-like, NAD(P)+-dependent aldehyde dehydrogenase-like (ALDH-like) family | Back alignment and domain information |
|---|
Score = 63.0 bits (153), Expect = 9e-11
Identities = 47/229 (20%), Positives = 77/229 (33%), Gaps = 25/229 (10%)
Query: 42 LRFFAGAADKIHGEVLKMSSELQGYTLREPVGVVGHIIPWNFPTTMFFMKVSPALAAGCT 101
R + I +L + E Y P+GV HI+P P + + +A
Sbjct: 73 ERGITASVGHIQDVLLPDNGET--YVRAFPIGVTMHILPSTNPLSGITSALR-GIATRNQ 129
Query: 102 MIVKPAEQTPLTALYYAHLAKLAGIPDG----VLNVVPGFGPTAGAAICSHMDIDYVCFT 157
I +P P T L A ++ VP + SH ID + T
Sbjct: 130 CIFRPHPSAPFTN-RALALLFQAADAAHGPKILVLYVPHPSDELAEELLSHPKIDLIVAT 188
Query: 158 GSTDVGRLVMQAAAASNLKQVSLELGGKSPLLIFDDADLDTAADVALLGNLYNKGEICVA 217
G D V A S V G SP+++ + AD + A+ ++ C +
Sbjct: 189 GGRDA---VDAAVKHSPHIPVIGFGAGNSPVVVDETADEERASGSVHDSKFFD-QNACAS 244
Query: 218 SSRVFVQEGIYD----KFEKKLLE---------KAKAWLVGDPFDPTVR 253
++V + + D +F+ KL+ K + FD
Sbjct: 245 EQNLYVVDDVLDPLYEEFKLKLVVEGLKVPQETKPLSKETTPSFDDEAL 293
|
The aldehyde dehydrogenase-like (ALDH-like) group of the ALDH superfamily of NAD(P)+-dependent enzymes which, in general, oxidize a wide range of endogenous and exogenous aliphatic and aromatic aldehydes to their corresponding carboxylic acids and play an important role in detoxification. This group includes families ALDH18, ALDH19, and ALDH20 and represents such proteins as gamma-glutamyl phosphate reductase, LuxC-like acyl-CoA reductase, and coenzyme A acylating aldehyde dehydrogenase. All of these proteins have a conserved cysteine that aligns with the catalytic cysteine of the ALDH group. Length = 397 |
| >gnl|CDD|143400 cd07081, ALDH_F20_ACDH_EutE-like, Coenzyme A acylating aldehyde dehydrogenase (ACDH), Ethanolamine utilization protein EutE, and related proteins | Back alignment and domain information |
|---|
Score = 55.0 bits (132), Expect = 4e-08
Identities = 57/242 (23%), Positives = 99/242 (40%), Gaps = 16/242 (6%)
Query: 9 EEHVEELAALDALDAGKVYLRAKTAEIPGAAEFLRFFAGAADKIHGEVLKMSSELQGYTL 68
E+ +LA L + G + K + AAE++ + D+ VL +
Sbjct: 35 EDARIDLAKLAVSETGMGRVEDKVIKNHFAAEYI--YNVYKDEKTCGVLTGDENGGTLII 92
Query: 69 REPVGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKP------AEQTPLTALYYAHLAK 122
EP+GVV I P PT+ K +L ++I P Q T L A +A
Sbjct: 93 AEPIGVVASITPSTNPTSTVIFKSLISLKTRNSIIFSPHPRAKKVTQRAATLLLQAAVA- 151
Query: 123 LAGIPDGVLNVVPGFGPTAGAAICSHMDIDYVCFTGSTDVGRLVMQAAAASNLKQVSLEL 182
AG P+ ++ + + I + TG G V++AA +S + +
Sbjct: 152 -AGAPENLIGWIDNPSIELAQRLMKFPGIGLLLATG----GPAVVKAAYSSGKPAIGVG- 205
Query: 183 GGKSPLLIFDDADLDTAADVALLGNLYNKGEICVASSRVFVQEGIYDKFEKKLLEKAKAW 242
G +P++I + AD+ A + ++ G IC + V V + +YD+ +L E A+
Sbjct: 206 AGNTPVVIDETADIKRAVQSIVKSKTFDNGVICASEQSVIVVDSVYDEV-MRLFEGQGAY 264
Query: 243 LV 244
+
Sbjct: 265 KL 266
|
Coenzyme A acylating aldehyde dehydrogenase (ACDH), an NAD+ and CoA-dependent acetaldehyde dehydrogenase, acetylating (EC=1.2.1.10), functions as a single enzyme (such as the Ethanolamine utilization protein, EutE, in Salmonella typhimurium) or as part of a multifunctional enzyme to convert acetaldehyde into acetyl-CoA. The E. coli aldehyde-alcohol dehydrogenase includes the functional domains, alcohol dehydrogenase (ADH), ACDH, and pyruvate-formate-lyase deactivase; and the Entamoeba histolytica aldehyde-alcohol dehydrogenase 2 (ALDH20A1) includes the functional domains ADH and ACDH, and may be critical enzymes in the fermentative pathway. Length = 439 |
| >gnl|CDD|143439 cd07121, ALDH_EutE, Ethanolamine utilization protein EutE-like | Back alignment and domain information |
|---|
Score = 51.5 bits (124), Expect = 4e-07
Identities = 67/315 (21%), Positives = 122/315 (38%), Gaps = 44/315 (13%)
Query: 65 GYTLRE--PVGVVGHIIPWNFPT-TMFFMKVSPALAAGCTMIVKPAEQTPLTALYYAHL- 120
G TL E P GV+G I P PT T+ +S LAAG ++ P + Y L
Sbjct: 89 GLTLVEYAPFGVIGAITPSTNPTETIINNSIS-MLAAGNAVVFNPHPGAKKVSAYAVELI 147
Query: 121 ---AKLAGIPDGVLNVVPGFGPTAGAAICSHMDIDYVCFTGSTDVGRLVMQ------AAA 171
AG PD ++ V + +H DI+ + TG V + + A
Sbjct: 148 NKAIAEAGGPDNLVVTVEEPTIETTNELMAHPDINLLVVTGGPAVVKAALSSGKKAIGAG 207
Query: 172 ASNLKQVSLELGGKSPLLIFDD-ADLDTAADVALLGNLYNKGEICVASSRVFVQEGIYDK 230
A N P ++ D+ AD++ AA + G ++ C+A V + + D
Sbjct: 208 AGN------------PPVVVDETADIEKAARDIVQGASFDNNLPCIAEKEVIAVDSVADY 255
Query: 231 FEKKLLEKAKAWLVGDPFDPTVRQGPQI----SERHFDRILSYIEHGKREGATLLTGGKP 286
+++ A+++ D + + ++ ++ GK L G
Sbjct: 256 L-IAAMQRNGAYVLNDE--QAEQLLEVVLLTNKGATPNK--KWV--GKDASKILKAAGIE 308
Query: 287 IGDKGYYIEPTIFTNVKEDMIIAKEEIFGPVMALMKFKTVEEAIKSANNTQYGL--AAGI 344
+ I +D EE P++ +++ K +EAI+ A ++G A I
Sbjct: 309 VPAD----IRLIIVETDKDHPFVVEEQMMPILPVVRVKNFDEAIELAVELEHGNRHTAII 364
Query: 345 VTKDLNVANTVSRSI 359
+K++ ++R++
Sbjct: 365 HSKNVENLTKMARAM 379
|
Coenzyme A acylating aldehyde dehydrogenase (ACDH), an NAD+ and CoA-dependent acetaldehyde dehydrogenase, acetylating (EC=1.2.1.10), converts acetaldehyde into acetyl-CoA. This CD is limited to such monofunctional enzymes as the Ethanolamine utilization protein, EutE, in Salmonella typhimurium. Mutations in eutE abolish the ability to utilize ethanolamine as a carbon source. Length = 429 |
| >gnl|CDD|143440 cd07122, ALDH_F20_ACDH, Coenzyme A acylating aldehyde dehydrogenase (ACDH), ALDH family 20-like | Back alignment and domain information |
|---|
Score = 44.8 bits (107), Expect = 5e-05
Identities = 79/327 (24%), Positives = 128/327 (39%), Gaps = 60/327 (18%)
Query: 70 EPVGVVGHIIPWNFP--TTMFFMKVSPALAAGCTMIVKP---AEQTPLTALYYAH-LAKL 123
EPVGV+ +IP P T +F K AL +I P A++ + A A
Sbjct: 94 EPVGVIAALIPSTNPTSTAIF--KALIALKTRNAIIFSPHPRAKKCSIEAAKIMREAAVA 151
Query: 124 AGIPDGVLNVVPGFGPT--AGAAICSHMDIDYVCFTGSTDVGRLVMQAAAASNLKQVSLE 181
AG P+G++ + P+ + H D+D + TG M AA S+ K
Sbjct: 152 AGAPEGLIQWIE--EPSIELTQELMKHPDVDLILATGGPG-----MVKAAYSSGKPA--- 201
Query: 182 LG---GKSPLLIFDDADLDTAADVALLGNLYNKGEICVASSRVFVQEGIYDKFEKKLLEK 238
+G G P I + AD+ A +L ++ G IC + V V + IYD+ + L++
Sbjct: 202 IGVGPGNVPAYIDETADIKRAVKDIILSKTFDNGTICASEQSVIVDDEIYDEV-RAELKR 260
Query: 239 AKAWLVGDPFDPTVRQGPQISERHFDRILSYIEHGKREGATLLTGGKPIGDKGYYI---- 294
A+ + + ++ + FD +G TL +G I
Sbjct: 261 RGAYFL------NEEEKEKLEKALFD-----------DGGTL--NPDIVGKSAQKIAELA 301
Query: 295 -----EPTIFTNVKEDMIIAKE----EIFGPVMALMKFKTVEEAIKSAN-NTQYGLA--- 341
E T +E + +E E PV+A + + EEA++ A +YG A
Sbjct: 302 GIEVPEDTKVLVAEETGVGPEEPLSREKLSPVLAFYRAEDFEEALEKARELLEYGGAGHT 361
Query: 342 AGIVTKDLNVANTVSRSIRAGIIWINC 368
A I + D V + + I +N
Sbjct: 362 AVIHSNDEEVIEEFALRMPVSRILVNT 388
|
Coenzyme A acylating aldehyde dehydrogenase (ACDH, EC=1.2.1.10), an NAD+ and CoA-dependent acetaldehyde dehydrogenase, functions as a single enzyme (such as the Ethanolamine utilization protein, EutE, in Salmonella typhimurium) or as part of a multifunctional enzyme to convert acetaldehyde into acetyl-CoA . The E. coli aldehyde-alcohol dehydrogenase includes the functional domains, alcohol dehydrogenase (ADH), ACDH, and pyruvate-formate-lyase deactivase; and the Entamoeba histolytica aldehyde-alcohol dehydrogenase 2 (ALDH20A1) includes the functional domains ADH and ACDH and may be critical enzymes in the fermentative pathway. Length = 436 |
| >gnl|CDD|237956 PRK15398, PRK15398, aldehyde dehydrogenase EutE; Provisional | Back alignment and domain information |
|---|
Score = 41.4 bits (98), Expect = 7e-04
Identities = 52/197 (26%), Positives = 84/197 (42%), Gaps = 34/197 (17%)
Query: 65 GYTLRE--PVGVVGHIIPWNFPT-TMFFMKVSPALAAGCTMIVKP---AEQTPLTA--LY 116
G TL E P GV+G + P PT T+ +S LAAG +++ P A++ L A L
Sbjct: 121 GLTLIEYAPFGVIGAVTPSTNPTETIINNAIS-MLAAGNSVVFSPHPGAKKVSLRAIELL 179
Query: 117 YAHLAKLAGIPDGVLNVV--PGFGPTAGAAICSHMDIDYVCFTGSTDVGRLVMQ------ 168
+ G P+ ++ V P + H I + TG V + M+
Sbjct: 180 NEAIVAAGG-PENLVVTVAEPTI--ETAQRLMKHPGIALLVVTGGPAVVKAAMKSGKKAI 236
Query: 169 AAAASNLKQVSLELGGKSPLLIFDD-ADLDTAADVALLGNLYNKGEICVASSRVFVQEGI 227
A A N P ++ D+ AD++ AA + G ++ C+A V V + +
Sbjct: 237 GAGAGN------------PPVVVDETADIEKAARDIVKGASFDNNLPCIAEKEVIVVDSV 284
Query: 228 YDKFEKKLLEKAKAWLV 244
D+ +L+EK A L+
Sbjct: 285 ADEL-MRLMEKNGAVLL 300
|
Length = 465 |
| >gnl|CDD|131570 TIGR02518, EutH_ACDH, acetaldehyde dehydrogenase (acetylating) | Back alignment and domain information |
|---|
Score = 40.6 bits (95), Expect = 0.001
Identities = 46/238 (19%), Positives = 90/238 (37%), Gaps = 15/238 (6%)
Query: 5 ADLIEEHVEELAALDALDAGKVYLRAKTAEIPGAAEFLRFFAGAADKIHGEVLKMSSELQ 64
D E+ +LA + + G K + AA + + D +L E +
Sbjct: 40 VDAAYENAVKLAKMANEETGFGKWEDKVIKNVFAATIV--YDSIKDMKTIGILSEDKEKK 97
Query: 65 GYTLREPVGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKP----AEQTPLTALYYAHL 120
+ PVGVV +IP PT+ K ++ A ++ P + T
Sbjct: 98 VIEIAVPVGVVAGLIPSTNPTSTAIYKTLISIKARNAIVFSPHPNAKKCIIETVKLMRKA 157
Query: 121 AKLAGIPDGVLNVVPGFGPTAGAAICSHMDIDYVCFTGSTDVGRLVMQAAAASNLKQVSL 180
A+ AG P+G + + + + D + TG G +++AA +S + +
Sbjct: 158 AEEAGAPEGAIGCITVPTIEGTNELMKNKDTSLILATG----GEAMVKAAYSSGTPAIGV 213
Query: 181 ELGGKSPLLIFDDADLDTAADVALLGNLYNKGEICVASSRVFVQ----EGIYDKFEKK 234
G P I A++ A + ++ G IC + + V+ + + ++ +K+
Sbjct: 214 G-PGNGPAYIERTANVKKAVRDIIDSKTFDNGTICASEQSIIVEECNKDAVVEELKKQ 270
|
Length = 488 |
Conserved Domains Detected by HHsearch
Original result of HHsearch against CDD database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 414 | |||
| KOG2450 | 501 | consensus Aldehyde dehydrogenase [Energy productio | 100.0 | |
| PLN02766 | 501 | coniferyl-aldehyde dehydrogenase | 100.0 | |
| PRK11241 | 482 | gabD succinate-semialdehyde dehydrogenase I; Provi | 100.0 | |
| COG1012 | 472 | PutA NAD-dependent aldehyde dehydrogenases [Energy | 100.0 | |
| PLN02466 | 538 | aldehyde dehydrogenase family 2 member | 100.0 | |
| PRK10090 | 409 | aldehyde dehydrogenase A; Provisional | 100.0 | |
| PLN02419 | 604 | methylmalonate-semialdehyde dehydrogenase [acylati | 100.0 | |
| PLN02174 | 484 | aldehyde dehydrogenase family 3 member H1 | 100.0 | |
| TIGR03374 | 472 | ABALDH 1-pyrroline dehydrogenase. Members of this | 100.0 | |
| cd07140 | 486 | ALDH_F1L_FTFDH 10-formyltetrahydrofolate dehydroge | 100.0 | |
| KOG2451 | 503 | consensus Aldehyde dehydrogenase [Energy productio | 100.0 | |
| cd07113 | 477 | ALDH_PADH_NahF Escherichia coli NAD+-dependent phe | 100.0 | |
| cd07142 | 476 | ALDH_F2BC Arabidosis aldehyde dehydrogenase family | 100.0 | |
| PLN02278 | 498 | succinic semialdehyde dehydrogenase | 100.0 | |
| PRK13968 | 462 | putative succinate semialdehyde dehydrogenase; Pro | 100.0 | |
| cd07141 | 481 | ALDH_F1AB_F2_RALDH1 NAD+-dependent retinal dehydro | 100.0 | |
| cd07117 | 475 | ALDH_StaphAldA1 Uncharacterized Staphylococcus aur | 100.0 | |
| PRK13252 | 488 | betaine aldehyde dehydrogenase; Provisional | 100.0 | |
| PRK09406 | 457 | gabD1 succinic semialdehyde dehydrogenase; Reviewe | 100.0 | |
| TIGR03216 | 481 | OH_muco_semi_DH 2-hydroxymuconic semialdehyde dehy | 100.0 | |
| cd07143 | 481 | ALDH_AldA_AN0554 Aspergillus nidulans aldehyde deh | 100.0 | |
| TIGR01780 | 448 | SSADH succinate-semialdehyde dehydrogenase. SSADH | 100.0 | |
| cd07120 | 455 | ALDH_PsfA-ACA09737 Pseudomonas putida aldehyde deh | 100.0 | |
| cd07559 | 480 | ALDH_ACDHII_AcoD-like Ralstonia eutrophus NAD+-dep | 100.0 | |
| PLN02467 | 503 | betaine aldehyde dehydrogenase | 100.0 | |
| cd07100 | 429 | ALDH_SSADH1_GabD1 Mycobacterium tuberculosis succi | 100.0 | |
| cd07115 | 453 | ALDH_HMSADH_HapE Pseudomonas fluorescens 4-hydroxy | 100.0 | |
| cd07091 | 476 | ALDH_F1-2_Ald2-like ALDH subfamily: ALDH families | 100.0 | |
| PLN02315 | 508 | aldehyde dehydrogenase family 7 member | 100.0 | |
| cd07119 | 482 | ALDH_BADH-GbsA Bacillus subtilis NAD+-dependent be | 100.0 | |
| TIGR02299 | 488 | HpaE 5-carboxymethyl-2-hydroxymuconate semialdehyd | 100.0 | |
| cd07144 | 484 | ALDH_ALD2-YMR170C Saccharomyces cerevisiae aldehyd | 100.0 | |
| PRK13473 | 475 | gamma-aminobutyraldehyde dehydrogenase; Provisiona | 100.0 | |
| cd07107 | 456 | ALDH_PhdK-like Nocardioides 2-carboxybenzaldehyde | 100.0 | |
| cd07097 | 473 | ALDH_KGSADH-YcbD Bacillus subtilis NADP+-dependent | 100.0 | |
| cd07118 | 454 | ALDH_SNDH Gluconobacter oxydans L-sorbosone dehydr | 100.0 | |
| cd07089 | 459 | ALDH_CddD-AldA-like Rhodococcus ruber 6-oxolauric | 100.0 | |
| cd07110 | 456 | ALDH_F10_BADH Arabidopsis betaine aldehyde dehydro | 100.0 | |
| cd07151 | 465 | ALDH_HBenzADH NADP+-dependent p-hydroxybenzaldehyd | 100.0 | |
| cd07090 | 457 | ALDH_F9_TMBADH NAD+-dependent 4-trimethylaminobuty | 100.0 | |
| cd07085 | 478 | ALDH_F6_MMSDH Methylmalonate semialdehyde dehydrog | 100.0 | |
| cd07086 | 478 | ALDH_F7_AASADH-like NAD+-dependent alpha-aminoadip | 100.0 | |
| cd07145 | 456 | ALDH_LactADH_F420-Bios Methanocaldococcus jannasch | 100.0 | |
| cd07112 | 462 | ALDH_GABALDH-PuuC Escherichia coli NADP+-dependent | 100.0 | |
| cd07109 | 454 | ALDH_AAS00426 Uncharacterized Saccharopolyspora sp | 100.0 | |
| cd07116 | 479 | ALDH_ACDHII-AcoD Ralstonia eutrophus NAD+-dependen | 100.0 | |
| cd07130 | 474 | ALDH_F7_AASADH NAD+-dependent alpha-aminoadipic se | 100.0 | |
| cd07124 | 512 | ALDH_PutA-P5CDH-RocA Delta(1)-pyrroline-5-carboxyl | 100.0 | |
| TIGR01804 | 467 | BADH glycine betaine aldehyde dehydrogenase. Betai | 100.0 | |
| cd07106 | 446 | ALDH_AldA-AAD23400 Streptomyces aureofaciens putat | 100.0 | |
| cd07148 | 455 | ALDH_RL0313 Uncharacterized ALDH ( RL0313) with si | 100.0 | |
| TIGR03250 | 472 | PhnAcAld_DH putative phosphonoacetaldehyde dehydro | 100.0 | |
| PRK09847 | 494 | gamma-glutamyl-gamma-aminobutyraldehyde dehydrogen | 100.0 | |
| cd07152 | 443 | ALDH_BenzADH NAD-dependent benzaldehyde dehydrogen | 100.0 | |
| cd07088 | 468 | ALDH_LactADH-AldA Escherichia coli lactaldehyde de | 100.0 | |
| cd07114 | 457 | ALDH_DhaS Uncharacterized Candidatus pelagibacter | 100.0 | |
| TIGR01237 | 511 | D1pyr5carbox2 delta-1-pyrroline-5-carboxylate dehy | 100.0 | |
| cd07123 | 522 | ALDH_F4-17_P5CDH Delta(1)-pyrroline-5-carboxylate | 100.0 | |
| cd07101 | 454 | ALDH_SSADH2_GabD2 Mycobacterium tuberculosis succi | 100.0 | |
| TIGR01236 | 533 | D1pyr5carbox1 delta-1-pyrroline-5-carboxylate dehy | 100.0 | |
| cd07139 | 471 | ALDH_AldA-Rv0768 Mycobacterium tuberculosis aldehy | 100.0 | |
| cd07150 | 451 | ALDH_VaniDH_like Pseudomonas putida vanillin dehyd | 100.0 | |
| cd07131 | 478 | ALDH_AldH-CAJ73105 Uncharacterized Candidatus kuen | 100.0 | |
| cd07138 | 466 | ALDH_CddD_SSP0762 Rhodococcus ruber 6-oxolauric ac | 100.0 | |
| cd07094 | 453 | ALDH_F21_LactADH-like ALDH subfamily: NAD+-depende | 100.0 | |
| cd07102 | 452 | ALDH_EDX86601 Uncharacterized aldehyde dehydrogena | 100.0 | |
| cd07092 | 450 | ALDH_ABALDH-YdcW Escherichia coli NAD+-dependent g | 100.0 | |
| PF00171 | 462 | Aldedh: Aldehyde dehydrogenase family; InterPro: I | 100.0 | |
| PRK09457 | 487 | astD succinylglutamic semialdehyde dehydrogenase; | 100.0 | |
| cd07095 | 431 | ALDH_SGSD_AstD N-succinylglutamate 5-semialdehyde | 100.0 | |
| PRK09407 | 524 | gabD2 succinic semialdehyde dehydrogenase; Reviewe | 100.0 | |
| cd07146 | 451 | ALDH_PhpJ Streptomyces putative phosphonoformaldeh | 100.0 | |
| cd07083 | 500 | ALDH_P5CDH ALDH subfamily NAD+-dependent delta(1)- | 100.0 | |
| PRK03137 | 514 | 1-pyrroline-5-carboxylate dehydrogenase; Provision | 100.0 | |
| cd07111 | 480 | ALDH_F16 Aldehyde dehydrogenase family 16A1-like. | 100.0 | |
| PLN02203 | 484 | aldehyde dehydrogenase | 100.0 | |
| cd07108 | 457 | ALDH_MGR_2402 Magnetospirillum NAD(P)+-dependent a | 100.0 | |
| cd07099 | 453 | ALDH_DDALDH Methylomonas sp. 4,4'-diapolycopene-di | 100.0 | |
| cd07104 | 431 | ALDH_BenzADH-like ALDH subfamily: NAD(P)+-dependen | 100.0 | |
| cd07147 | 452 | ALDH_F21_RNP123 Aldehyde dehydrogenase family 21A1 | 100.0 | |
| cd07137 | 432 | ALDH_F3FHI Plant aldehyde dehydrogenase family 3 m | 100.0 | |
| cd07093 | 455 | ALDH_F8_HMSADH Human aldehyde dehydrogenase family | 100.0 | |
| cd07136 | 449 | ALDH_YwdH-P39616 Bacillus subtilis aldehyde dehydr | 100.0 | |
| cd07105 | 432 | ALDH_SaliADH Salicylaldehyde dehydrogenase, DoxF-l | 100.0 | |
| PTZ00381 | 493 | aldehyde dehydrogenase family protein; Provisional | 100.0 | |
| cd07103 | 451 | ALDH_F5_SSADH_GabD Mitochondrial succinate-semiald | 100.0 | |
| cd07135 | 436 | ALDH_F14-YMR110C Saccharomyces cerevisiae aldehyde | 100.0 | |
| TIGR01722 | 477 | MMSDH methylmalonic acid semialdehyde dehydrogenas | 100.0 | |
| cd07098 | 465 | ALDH_F15-22 Aldehyde dehydrogenase family 15A1 and | 100.0 | |
| PLN00412 | 496 | NADP-dependent glyceraldehyde-3-phosphate dehydrog | 100.0 | |
| cd07133 | 434 | ALDH_CALDH_CalB Coniferyl aldehyde dehydrogenase-l | 100.0 | |
| TIGR03240 | 484 | arg_catab_astD succinylglutamic semialdehyde dehyd | 100.0 | |
| cd07125 | 518 | ALDH_PutA-P5CDH Delta(1)-pyrroline-5-carboxylate d | 100.0 | |
| cd07128 | 513 | ALDH_MaoC-N N-terminal domain of the monoamine oxi | 100.0 | |
| cd07134 | 433 | ALDH_AlkH-like Pseudomonas putida Aldehyde dehydro | 100.0 | |
| cd07149 | 453 | ALDH_y4uC Uncharacterized ALDH (y4uC) with similar | 100.0 | |
| TIGR02278 | 663 | PaaN-DH phenylacetic acid degradation protein paaN | 100.0 | |
| cd07132 | 443 | ALDH_F3AB Aldehyde dehydrogenase family 3 members | 100.0 | |
| cd07082 | 473 | ALDH_F11_NP-GAPDH NADP+-dependent non-phosphorylat | 100.0 | |
| PRK11903 | 521 | aldehyde dehydrogenase; Provisional | 100.0 | |
| TIGR01238 | 500 | D1pyr5carbox3 delta-1-pyrroline-5-carboxylate dehy | 100.0 | |
| cd07087 | 426 | ALDH_F3-13-14_CALDH-like ALDH subfamily: Coniferyl | 100.0 | |
| PRK11563 | 675 | bifunctional aldehyde dehydrogenase/enoyl-CoA hydr | 100.0 | |
| PRK11904 | 1038 | bifunctional proline dehydrogenase/pyrroline-5-car | 100.0 | |
| PRK11809 | 1318 | putA trifunctional transcriptional regulator/proli | 100.0 | |
| cd07126 | 489 | ALDH_F12_P5CDH Delta(1)-pyrroline-5-carboxylate de | 100.0 | |
| cd07078 | 432 | ALDH NAD(P)+ dependent aldehyde dehydrogenase fami | 100.0 | |
| KOG2456 | 477 | consensus Aldehyde dehydrogenase [Energy productio | 100.0 | |
| PRK11905 | 1208 | bifunctional proline dehydrogenase/pyrroline-5-car | 100.0 | |
| cd07129 | 454 | ALDH_KGSADH Alpha-Ketoglutaric Semialdehyde Dehydr | 100.0 | |
| cd07084 | 442 | ALDH_KGSADH-like ALDH subfamily: NAD(P)+-dependent | 100.0 | |
| KOG2454 | 583 | consensus Betaine aldehyde dehydrogenase [Energy p | 100.0 | |
| cd07121 | 429 | ALDH_EutE Ethanolamine utilization protein EutE-li | 100.0 | |
| TIGR02288 | 551 | PaaN_2 phenylacetic acid degradation protein paaN. | 100.0 | |
| PRK15398 | 465 | aldehyde dehydrogenase EutE; Provisional | 100.0 | |
| cd07081 | 439 | ALDH_F20_ACDH_EutE-like Coenzyme A acylating aldeh | 100.0 | |
| cd07127 | 549 | ALDH_PAD-PaaZ Phenylacetic acid degradation protei | 100.0 | |
| cd07079 | 406 | ALDH_F18-19_ProA-GPR Gamma-glutamyl phosphate redu | 100.0 | |
| PRK00197 | 417 | proA gamma-glutamyl phosphate reductase; Provision | 100.0 | |
| TIGR02518 | 488 | EutH_ACDH acetaldehyde dehydrogenase (acetylating) | 100.0 | |
| cd07122 | 436 | ALDH_F20_ACDH Coenzyme A acylating aldehyde dehydr | 100.0 | |
| PLN02418 | 718 | delta-1-pyrroline-5-carboxylate synthase | 100.0 | |
| PRK13805 | 862 | bifunctional acetaldehyde-CoA/alcohol dehydrogenas | 100.0 | |
| cd06534 | 367 | ALDH-SF NAD(P)+-dependent aldehyde dehydrogenase s | 100.0 | |
| cd07077 | 397 | ALDH-like NAD(P)+-dependent aldehyde dehydrogenase | 100.0 | |
| TIGR00407 | 398 | proA gamma-glutamyl phosphate reductase. The prosi | 100.0 | |
| COG4230 | 769 | Delta 1-pyrroline-5-carboxylate dehydrogenase [Ene | 100.0 | |
| TIGR01092 | 715 | P5CS delta l-pyrroline-5-carboxylate synthetase. T | 100.0 | |
| KOG2455 | 561 | consensus Delta-1-pyrroline-5-carboxylate dehydrog | 100.0 | |
| KOG2452 | 881 | consensus Formyltetrahydrofolate dehydrogenase [Nu | 100.0 | |
| KOG2453 | 507 | consensus Aldehyde dehydrogenase [Energy productio | 100.0 | |
| cd07080 | 422 | ALDH_Acyl-CoA-Red_LuxC Acyl-CoA reductase LuxC. Ac | 100.0 | |
| COG0014 | 417 | ProA Gamma-glutamyl phosphate reductase [Amino aci | 100.0 | |
| KOG4165 | 433 | consensus Gamma-glutamyl phosphate reductase [Amin | 99.93 | |
| PF05893 | 399 | LuxC: Acyl-CoA reductase (LuxC); InterPro: IPR0086 | 99.83 | |
| KOG2449 | 157 | consensus Methylmalonate semialdehyde dehydrogenas | 99.5 | |
| PF07368 | 215 | DUF1487: Protein of unknown function (DUF1487); In | 99.27 | |
| PRK11905 | 1208 | bifunctional proline dehydrogenase/pyrroline-5-car | 98.57 | |
| PF00815 | 412 | Histidinol_dh: Histidinol dehydrogenase; InterPro: | 98.08 | |
| PLN02926 | 431 | histidinol dehydrogenase | 97.68 | |
| PRK00877 | 425 | hisD bifunctional histidinal dehydrogenase/ histid | 97.65 | |
| TIGR00069 | 393 | hisD histidinol dehydrogenase. This model describe | 97.62 | |
| PRK13769 | 368 | histidinol dehydrogenase; Provisional | 97.62 | |
| COG0141 | 425 | HisD Histidinol dehydrogenase [Amino acid transpor | 97.56 | |
| cd06572 | 390 | Histidinol_dh Histidinol dehydrogenase, HisD, E.C | 97.54 | |
| PRK13770 | 416 | histidinol dehydrogenase; Provisional | 97.48 | |
| PRK12447 | 426 | histidinol dehydrogenase; Reviewed | 97.26 | |
| PRK11809 | 1318 | putA trifunctional transcriptional regulator/proli | 96.89 | |
| COG4230 | 769 | Delta 1-pyrroline-5-carboxylate dehydrogenase [Ene | 91.87 | |
| KOG2450 | 501 | consensus Aldehyde dehydrogenase [Energy productio | 82.34 |
| >KOG2450 consensus Aldehyde dehydrogenase [Energy production and conversion] | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.5e-96 Score=705.16 Aligned_cols=413 Identities=57% Similarity=0.947 Sum_probs=401.0
Q ss_pred CHHHHHHHHHhHHHHHHHHHHhcCCChHHHhhchHHHHHHHHHHHHHhhhhhcCcccccCCCcccceeecCCceEEEEcC
Q 015042 1 MWKFADLIEEHVEELAALDALDAGKVYLRAKTAEIPGAAEFLRFFAGAADKIHGEVLKMSSELQGYTLREPVGVVGHIIP 80 (414)
Q Consensus 1 L~~~a~~l~~~~~~l~~~~~~etGk~~~e~~~~ei~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p 80 (414)
|++++++++++++.|+...+.+.|||..+++..|+..+++.+||++.|++...+..++.+.....|.+++|+|||+.|.|
T Consensus 88 L~~~Adlie~~~~~lA~~E~~d~GKp~~~a~~~Dl~~~~~~~ry~ag~ad~~~~~~~~~~~~~~~yt~~eP~GV~G~I~p 167 (501)
T KOG2450|consen 88 LRKLADLIEQDADVLAALEVLDNGKPYPEALVSDLPPAIDCFRYYAGWADKIHGSTIPTDGEFFAYTRREPIGVCGQIIP 167 (501)
T ss_pred HHHHHHHHHhhhHHHhhhcccccCCcchhhhhcCchhhhhHHHhhccchhhcccccCCCCCceEEEecCCcceeeeEecc
Confidence 68999999999999999999999999999877899999999999999998887777776677789999999999999999
Q ss_pred CccchHHHHHhHHHHHhhCCeEEeecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhhHHHhhhCCCccEEEEeCCc
Q 015042 81 WNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLTALYYAHLAKLAGIPDGVLNVVPGFGPTAGAAICSHMDIDYVCFTGST 160 (414)
Q Consensus 81 ~n~P~~~~~~~~~~aLaaGN~vv~kps~~~~~~~~~l~~~l~~aG~p~g~v~~v~~~~~~~~~~l~~~~~v~~v~~tGs~ 160 (414)
||||+....|+++|||++||+||+||++++|+|+..+++++.++|+|+|++|+++|.+.+.+..|.+|++|+.|.||||.
T Consensus 168 WN~Pllm~awKlaPALa~GNtvV~Kpae~tplsal~~~~l~~eaG~P~GVvNii~G~G~~aG~al~sH~dv~kiaFTGSt 247 (501)
T KOG2450|consen 168 WNFPLLMQAWKLAPALAAGNTVVLKPAEQTPLTALYLASLCKEAGFPPGVVNIVPGSGTTAGAALASHPDVDKVAFTGST 247 (501)
T ss_pred CchHHHHHHHhhhhHHhhCcEEEecCCCCCCchHHHHHHHhHHhcCCcceEEEccCCCchHHHHHhhCCCCceEEecCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhcccceeEEEcCCCCCceEcCCCCHHHHHHHHHHHhhccCCCCcccCceEEEeCchHHHHHHHHHHHHh
Q 015042 161 DVGRLVMQAAAASNLKQVSLELGGKSPLLIFDDADLDTAADVALLGNLYNKGEICVASSRVFVQEGIYDKFEKKLLEKAK 240 (414)
Q Consensus 161 ~~g~~i~~~~a~~~~~~~~~e~gg~~~~iV~~dadl~~aa~~i~~~~~~~~Gq~C~a~~~i~V~~~i~d~f~~~l~~~~~ 240 (414)
.+|+.|++.++..++||+++|+|||+|.||.+|||++.|++.+..+.|+|+||.|.+.+|+|||+++||+|++.++++.+
T Consensus 248 ~~G~~I~~aaa~~n~K~vtLElGGKsp~Ivf~Dadld~av~~~~~~iF~nqGq~C~a~sR~~Vqe~iydefv~~~v~~a~ 327 (501)
T KOG2450|consen 248 PVGKEIMEAAAESNLKPVTLELGGKSPIIVFDDADLDLAVENAAFGIFFNQGQCCTAGSRVFVQESIYDEFVEKFVAAAK 327 (501)
T ss_pred cchhHHhhhhhhcCCceeccccCCCCcceEecccchHHHHHHHHHHhhcccccccccCceeEEechHHHHHHHHHHHHHh
Confidence 99999999998667999999999999999999999999999999999999999999999999999999999999999996
Q ss_pred h-cccCCCCCCCCcccccCCHHHHHHHHHHHHHHHHcCCEEEeCCcccCCCCceeeeEEEeeCCCcccccccceecceEE
Q 015042 241 A-WLVGDPFDPTVRQGPQISERHFDRILSYIEHGKREGATLLTGGKPIGDKGYYIEPTIFTNVKEDMIIAKEEIFGPVMA 319 (414)
Q Consensus 241 ~-~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~ 319 (414)
+ +++|||.++.+.+||.+++.+++++.+||+.++++|++++|||.+..+.|+|+.|||+.++..+|.+++||+||||+.
T Consensus 328 ~~~kvGdP~~~~~~qG~~i~~~q~ekI~~yi~~~k~eGa~l~~gG~~~g~~Gyfi~Ptv~~~v~~~m~i~~EEIFGPVv~ 407 (501)
T KOG2450|consen 328 KKLKVGDPFDEGTEQGPQISKTQYEKILGYIESGKKEGATLLCGGVRLGDKGYFIKPTVFTNVTDDMRIAKEEIFGPVVV 407 (501)
T ss_pred cccccCCCCCcccccccccCHHHHHHHHHHHHHHHhcCCEEEecCcccCCCceEECCeeccCCChhhhhhHhhccCceEE
Confidence 6 999999999999999999999999999999999999999999988777899999999999999999999999999999
Q ss_pred EEeeCCHHHHHHHhhcCCCCceEEEecCCHHHHHHHHHhcceeEEEEcCcCCCCCCCCcccCCCCCCCccchHHHHHhhh
Q 015042 320 LMKFKTVEEAIKSANNTQYGLAAGIVTKDLNVANTVSRSIRAGIIWINCYFGFSMDCPYGGYKMSGFGREYGLESLYKYL 399 (414)
Q Consensus 320 v~~~~~~~eai~~~n~~~~gl~~sv~s~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~p~gG~~~sG~g~~~g~~~~~~~~ 399 (414)
|++|++.||+|+++|++.|||++.|||+|.++++++++++++|+||||++...+...||||+|+||+||+.|.+++.+||
T Consensus 408 v~~F~t~eE~i~~AN~t~yGLAa~V~t~dl~~a~~va~~l~aGtVwiN~y~~~~~~~PfgG~K~SG~GRE~g~~~l~~yt 487 (501)
T KOG2450|consen 408 VLKFKTEEEVIERANNTTYGLAAGVFTKDLDKAHRVANALQAGTVWINCYNVFDAQVPFGGFKMSGIGRELGEYGLEAYT 487 (501)
T ss_pred EEecCcHHHHHHHhcCCcccceeeEeccChHHHHHHHHHhcCceEEEeccccccccCCccccccccCCccccHHHHhhcc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eeeEEEeeCCCCCC
Q 015042 400 QIKSVVTPIYNSPW 413 (414)
Q Consensus 400 ~~k~i~~~~~~~~~ 413 (414)
+.|+|+++.+.+.|
T Consensus 488 evKtv~v~~~~~~~ 501 (501)
T KOG2450|consen 488 EVKTVTVKLPQKNS 501 (501)
T ss_pred eeeEEEEeCCCCCC
Confidence 99999999987665
|
|
| >PLN02766 coniferyl-aldehyde dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.5e-93 Score=724.75 Aligned_cols=414 Identities=80% Similarity=1.310 Sum_probs=392.0
Q ss_pred CHHHHHHHHHhHHHHHHHHHHhcCCChHHHhhchHHHHHHHHHHHHHhhhhhcCcccccCCCcccceeecCCceEEEEcC
Q 015042 1 MWKFADLIEEHVEELAALDALDAGKVYLRAKTAEIPGAAEFLRFFAGAADKIHGEVLKMSSELQGYTLREPVGVVGHIIP 80 (414)
Q Consensus 1 L~~~a~~l~~~~~~l~~~~~~etGk~~~e~~~~ei~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p 80 (414)
|+++++.|++|+++|++++++|+|||..++...|+..+++.+++++..+++..++..+...+...+.+++|+|||++|+|
T Consensus 88 L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~a~~~~~~~g~~~~~~~~~~~~~~~~P~GVV~~I~P 167 (501)
T PLN02766 88 MMKFADLIEEHIEELAALDTIDAGKLFALGKAVDIPAAAGLLRYYAGAADKIHGETLKMSRQLQGYTLKEPIGVVGHIIP 167 (501)
T ss_pred HHHHHHHHHHhHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCceeccCCCceEEEEeccceEEEEECC
Confidence 57899999999999999999999999987665699999999999998887665554333333456788999999999999
Q ss_pred CccchHHHHHhHHHHHhhCCeEEeecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhhHHHhhhCCCccEEEEeCCc
Q 015042 81 WNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLTALYYAHLAKLAGIPDGVLNVVPGFGPTAGAAICSHMDIDYVCFTGST 160 (414)
Q Consensus 81 ~n~P~~~~~~~~~~aLaaGN~vv~kps~~~~~~~~~l~~~l~~aG~p~g~v~~v~~~~~~~~~~l~~~~~v~~v~~tGs~ 160 (414)
||||+...++++++||++||+||+|||+.+|.++..+.+++.++|+|+|++|++++++.+.++.|+.||++|+|.||||+
T Consensus 168 wN~P~~~~~~~~~~ALaaGN~VVlKPs~~tp~~~~~l~~~~~~aGlP~gvv~~v~g~~~~~~~~L~~~p~v~~V~FTGS~ 247 (501)
T PLN02766 168 WNFPSTMFFMKVAPALAAGCTMVVKPAEQTPLSALFYAHLAKLAGVPDGVINVVTGFGPTAGAAIASHMDVDKVSFTGST 247 (501)
T ss_pred CCChHHHHHHHHHHHHHcCCEEEEeCCCCchHHHHHHHHHHHhcCCCcCcEEEEecCchHHHHHHhcCCCCCEEEEECcH
Confidence 99999999999999999999999999999999999999999999999999999999777889999999999999999999
Q ss_pred HHHHHHHHHHHhcccceeEEEcCCCCCceEcCCCCHHHHHHHHHHHhhccCCCCcccCceEEEeCchHHHHHHHHHHHHh
Q 015042 161 DVGRLVMQAAAASNLKQVSLELGGKSPLLIFDDADLDTAADVALLGNLYNKGEICVASSRVFVQEGIYDKFEKKLLEKAK 240 (414)
Q Consensus 161 ~~g~~i~~~~a~~~~~~~~~e~gg~~~~iV~~dadl~~aa~~i~~~~~~~~Gq~C~a~~~i~V~~~i~d~f~~~l~~~~~ 240 (414)
.+|+.|++.++.++++|+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++
T Consensus 248 ~~G~~i~~~aa~~~l~~~~lElGGknp~iV~~dADl~~Aa~~i~~g~f~n~GQ~C~a~~ri~V~~si~d~f~~~l~~~~~ 327 (501)
T PLN02766 248 EVGRKIMQAAATSNLKQVSLELGGKSPLLIFDDADVDMAVDLALLGIFYNKGEICVASSRVYVQEGIYDEFVKKLVEKAK 327 (501)
T ss_pred HHHHHHHHHhhhcCCCeEEEECCCCCeEEECCCCCHHHHHHHHHHHHHhhcCCCCCCCeEEEEcHHHHHHHHHHHHHHHH
Confidence 99999999887448899999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hcccCCCCCCCCcccccCCHHHHHHHHHHHHHHHHcCCEEEeCCcccCCCCceeeeEEEeeCCCcccccccceecceEEE
Q 015042 241 AWLVGDPFDPTVRQGPQISERHFDRILSYIEHGKREGATLLTGGKPIGDKGYYIEPTIFTNVKEDMIIAKEEIFGPVMAL 320 (414)
Q Consensus 241 ~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v 320 (414)
++++|+|.++++++||+++..++++++++|++++.+|+++++||......|+|++|||+.+++++|++++||+||||++|
T Consensus 328 ~l~~G~p~~~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~v~~gG~~~~~~g~~~~PTvl~~v~~~~~i~~eE~FGPVl~v 407 (501)
T PLN02766 328 DWVVGDPFDPRARQGPQVDKQQFEKILSYIEHGKREGATLLTGGKPCGDKGYYIEPTIFTDVTEDMKIAQDEIFGPVMSL 407 (501)
T ss_pred hccCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHhCCCEEEeCCCcCCCCCeEEeeEEEecCCCCChhhhCCccCceEEE
Confidence 99999999999999999999999999999999999999999999765457899999999999999999999999999999
Q ss_pred EeeCCHHHHHHHhhcCCCCceEEEecCCHHHHHHHHHhcceeEEEEcCcCCCCCCCCcccCCCCCCCccchHHHHHhhhe
Q 015042 321 MKFKTVEEAIKSANNTQYGLAAGIVTKDLNVANTVSRSIRAGIIWINCYFGFSMDCPYGGYKMSGFGREYGLESLYKYLQ 400 (414)
Q Consensus 321 ~~~~~~~eai~~~n~~~~gl~~sv~s~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~p~gG~~~sG~g~~~g~~~~~~~~~ 400 (414)
++|+|++|||+++|+++|||++||||+|.+.++++++++++|+|+||+.....+.+||||+|.||+|+++|++|+++||+
T Consensus 408 ~~~~~~deai~~aN~~~~GL~a~Vft~d~~~a~~~~~~l~~G~v~iN~~~~~~~~~PfGG~k~SG~G~~~G~~~l~~ft~ 487 (501)
T PLN02766 408 MKFKTVEEAIKKANNTKYGLAAGIVTKDLDVANTVSRSIRAGTIWVNCYFAFDPDCPFGGYKMSGFGRDQGMDALDKYLQ 487 (501)
T ss_pred EEeCCHHHHHHHHhCCCCCceEEEECCCHHHHHHHHHhCCcceEEECCCCCCCCCCCcCCcccCcCCccchHHHHHHHhc
Confidence 99999999999999999999999999999999999999999999999987777889999999999999999999999999
Q ss_pred eeEEEeeCCCCCCC
Q 015042 401 IKSVVTPIYNSPWL 414 (414)
Q Consensus 401 ~k~i~~~~~~~~~~ 414 (414)
+|+|+++..+.||+
T Consensus 488 ~k~v~~~~~~~~~~ 501 (501)
T PLN02766 488 VKSVVTPLYNSPWL 501 (501)
T ss_pred eEEEEEeccccccC
Confidence 99999999999996
|
|
| >PRK11241 gabD succinate-semialdehyde dehydrogenase I; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.7e-92 Score=715.20 Aligned_cols=405 Identities=39% Similarity=0.670 Sum_probs=382.2
Q ss_pred CHHHHHHHHHhHHHHHHHHHHhcCCChHHHhhchHHHHHHHHHHHHHhhhhhcCcccccC-CCcccceeecCCceEEEEc
Q 015042 1 MWKFADLIEEHVEELAALDALDAGKVYLRAKTAEIPGAAEFLRFFAGAADKIHGEVLKMS-SELQGYTLREPVGVVGHII 79 (414)
Q Consensus 1 L~~~a~~l~~~~~~l~~~~~~etGk~~~e~~~~ei~~~~~~l~~~a~~~~~~~~~~~~~~-~~~~~~~~~~P~Gvv~~i~ 79 (414)
|+++++.|++++++|++++++|+|||..++ ..|+..+++.+++++.++.+..+...+.. .+...+.+++|+|||++|+
T Consensus 76 L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a-~~ev~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~~P~GVv~~I~ 154 (482)
T PRK11241 76 LRRWFNLMMEHQDDLARLMTLEQGKPLAEA-KGEISYAASFIEWFAEEGKRIYGDTIPGHQADKRLIVIKQPIGVTAAIT 154 (482)
T ss_pred HHHHHHHHHHhHHHHHHHHHHhcCCCHHHH-HHHHHHHHHHHHHHHHHHHHhcCcccccCCCCceEEEEEeeceEEEEEC
Confidence 578999999999999999999999999976 46999999999999988876655443322 2345678999999999999
Q ss_pred CCccchHHHHHhHHHHHhhCCeEEeecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhhHHHhhhCCCccEEEEeCC
Q 015042 80 PWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLTALYYAHLAKLAGIPDGVLNVVPGFGPTAGAAICSHMDIDYVCFTGS 159 (414)
Q Consensus 80 p~n~P~~~~~~~~~~aLaaGN~vv~kps~~~~~~~~~l~~~l~~aG~p~g~v~~v~~~~~~~~~~l~~~~~v~~v~~tGs 159 (414)
|||||+...++++++||++||+||+|||+.+|.++..+.+++.++|+|+|++|++++++.+.++.|+.||++|.|.||||
T Consensus 155 PwN~P~~~~~~~~~~ALaaGN~VVlKPs~~tp~~~~~l~~~~~~aglP~gvv~vv~g~~~~~~~~l~~~~~v~~v~FTGS 234 (482)
T PRK11241 155 PWNFPAAMITRKAGPALAAGCTMVLKPASQTPFSALALAELAIRAGIPAGVFNVVTGSAGAVGGELTSNPLVRKLSFTGS 234 (482)
T ss_pred CCcChHHHHHHHHHHHHHhCCEEEEECCCCChHHHHHHHHHHHHcCCCcccEEEEecCCchhHHHHhcCCCCCEEEEECc
Confidence 99999999999999999999999999999999999999999999999999999999977778999999999999999999
Q ss_pred cHHHHHHHHHHHhcccceeEEEcCCCCCceEcCCCCHHHHHHHHHHHhhccCCCCcccCceEEEeCchHHHHHHHHHHHH
Q 015042 160 TDVGRLVMQAAAASNLKQVSLELGGKSPLLIFDDADLDTAADVALLGNLYNKGEICVASSRVFVQEGIYDKFEKKLLEKA 239 (414)
Q Consensus 160 ~~~g~~i~~~~a~~~~~~~~~e~gg~~~~iV~~dadl~~aa~~i~~~~~~~~Gq~C~a~~~i~V~~~i~d~f~~~l~~~~ 239 (414)
+.+|+.|++.++ ++++|+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|++++
T Consensus 235 ~~~G~~i~~~aa-~~l~~~~lElGGknp~IV~~dADld~aa~~i~~~~f~~aGQ~C~a~~ri~V~~~i~d~f~~~l~~~~ 313 (482)
T PRK11241 235 TEIGRQLMEQCA-KDIKKVSLELGGNAPFIVFDDADLDKAVEGALASKFRNAGQTCVCANRLYVQDGVYDRFAEKLQQAV 313 (482)
T ss_pred HHHHHHHHHHHH-hcCCcEEEECCCCCeEEEcCCCCHHHHHHHHHHHHHhcCCCCCccCeEEEEeHHHHHHHHHHHHHHH
Confidence 999999999988 8899999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhcccCCCCCCCCcccccCCHHHHHHHHHHHHHHHHcCCEEEeCCcccCCCCceeeeEEEeeCCCcccccccceecceEE
Q 015042 240 KAWLVGDPFDPTVRQGPQISERHFDRILSYIEHGKREGATLLTGGKPIGDKGYYIEPTIFTNVKEDMIIAKEEIFGPVMA 319 (414)
Q Consensus 240 ~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~ 319 (414)
+++++|+|.++++++||++++.+++++++++++++++|+++++||.....+|+|++|||+.+++++|.+++||+||||++
T Consensus 314 ~~l~~G~p~~~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~vl~GG~~~~~~g~f~~Ptvl~~v~~~~~i~~eE~FGPVl~ 393 (482)
T PRK11241 314 SKLHIGDGLEKGVTIGPLIDEKAVAKVEEHIADALEKGARVVCGGKAHELGGNFFQPTILVDVPANAKVAKEETFGPLAP 393 (482)
T ss_pred hhCCCCCCCCCCCCcCCCCCHHHHHHHHHHHHHHHhCCCEEEecCCCCCCCCeEEeeEEEECCCCCChhhhCcCcCCEEE
Confidence 99999999999999999999999999999999999999999999976434689999999999999999999999999999
Q ss_pred EEeeCCHHHHHHHhhcCCCCceEEEecCCHHHHHHHHHhcceeEEEEcCcCCCCCCCCcccCCCCCCCccchHHHHHhhh
Q 015042 320 LMKFKTVEEAIKSANNTQYGLAAGIVTKDLNVANTVSRSIRAGIIWINCYFGFSMDCPYGGYKMSGFGREYGLESLYKYL 399 (414)
Q Consensus 320 v~~~~~~~eai~~~n~~~~gl~~sv~s~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~p~gG~~~sG~g~~~g~~~~~~~~ 399 (414)
|++|+|+||||+++|+++|||++||||+|.+.++++++++++|.||||++....+.+||||+|.||+|+++|.+|+++||
T Consensus 394 v~~~~~~~eai~~aN~s~~GL~a~Vft~d~~~a~~~~~~l~~G~v~iN~~~~~~~~~PfGG~k~SG~G~~~g~~g~~~ft 473 (482)
T PRK11241 394 LFRFKDEADVIAQANDTEFGLAAYFYARDLSRVFRVGEALEYGIVGINTGIISNEVAPFGGIKASGLGREGSKYGIEDYL 473 (482)
T ss_pred EEEeCCHHHHHHHhhCCCCCceEEEEcCCHHHHHHHHHHcCccEEEECCCCCCCCCCCcCCccccccCcccHHHHHHHhh
Confidence 99999999999999999999999999999999999999999999999998776667899999999999999999999999
Q ss_pred eeeEEEee
Q 015042 400 QIKSVVTP 407 (414)
Q Consensus 400 ~~k~i~~~ 407 (414)
++|+|++.
T Consensus 474 ~~k~v~~~ 481 (482)
T PRK11241 474 EIKYMCIG 481 (482)
T ss_pred cceEEEEe
Confidence 99998764
|
|
| >COG1012 PutA NAD-dependent aldehyde dehydrogenases [Energy production and conversion] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-91 Score=704.69 Aligned_cols=404 Identities=50% Similarity=0.811 Sum_probs=382.8
Q ss_pred CHHHHHHHHHhHHHHHHHHHHhcCCChHHHhhchHHHHHHHHHHHHHhhhhhcCcccccCCCcccceeecCCceEEEEcC
Q 015042 1 MWKFADLIEEHVEELAALDALDAGKVYLRAKTAEIPGAAEFLRFFAGAADKIHGEVLKMSSELQGYTLREPVGVVGHIIP 80 (414)
Q Consensus 1 L~~~a~~l~~~~~~l~~~~~~etGk~~~e~~~~ei~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p 80 (414)
|++++++|++|+++|++++++|+|||+.+++. |+..+++.++|++..+++..+...+...+...+++++|+|||++|+|
T Consensus 64 L~~~a~~l~~~~~ela~~~~~e~Gk~i~ea~~-ei~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~P 142 (472)
T COG1012 64 LRRIADLLEARAEELAALITLETGKPISEARG-EIARAADFIRYYAEEARRLEGETIPTDKGSKALVRREPLGVVGAITP 142 (472)
T ss_pred HHHHHHHHHHhHHHHHHHHHHHcCCCHHHHHH-HHHHHHHHHHHHHHHHHHhcCCccCCCCCcceEEEeecceEEEEECC
Confidence 57899999999999999999999999998654 69999999999999998776665443346788999999999999999
Q ss_pred CccchHHHHHhHHHHHhhCCeEEeecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhhHHHhhhCCCccEEEEeCCc
Q 015042 81 WNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLTALYYAHLAKLAGIPDGVLNVVPGFGPTAGAAICSHMDIDYVCFTGST 160 (414)
Q Consensus 81 ~n~P~~~~~~~~~~aLaaGN~vv~kps~~~~~~~~~l~~~l~~aG~p~g~v~~v~~~~~~~~~~l~~~~~v~~v~~tGs~ 160 (414)
||||++..++++++||++||+||+|||+.+|+++..+++++.++|+|+|++|++++.+.+.++.|+.||+|++|.||||+
T Consensus 143 wNfP~~~~~~k~apALaaGntVV~KPse~tp~sa~~l~~~~~~aglP~Gv~nvv~g~~~~~g~~l~~~p~v~~i~FTGSt 222 (472)
T COG1012 143 WNFPLALAAWKLAPALAAGNTVVLKPSEQTPLSALALAELAAEAGLPAGVLNVVTGGGAEVGDALVAHPDVDAISFTGST 222 (472)
T ss_pred CCCHHHHHHhhHHHHHHcCCEEEEECcccCcHHHHHHHHHHHHhCCCCCeEEEEeCCCchHHHHHhcCCCCCEEEEECCh
Confidence 99999999999999999999999999999999999999999999999999999999777799999999999999999999
Q ss_pred HHHHHHHHHHHhcccceeEEEcCCCCCceEcCCCCHHHHHHHHHHHhhccCCCCcccCceEEEeCchHHHHHHHHHHHHh
Q 015042 161 DVGRLVMQAAAASNLKQVSLELGGKSPLLIFDDADLDTAADVALLGNLYNKGEICVASSRVFVQEGIYDKFEKKLLEKAK 240 (414)
Q Consensus 161 ~~g~~i~~~~a~~~~~~~~~e~gg~~~~iV~~dadl~~aa~~i~~~~~~~~Gq~C~a~~~i~V~~~i~d~f~~~l~~~~~ 240 (414)
.+|+.|++.++ +++||+++|+|||||+||++|||++.|++.+++++|+|+||.|++++|+|||+++||+|+++|.++ +
T Consensus 223 ~~G~~i~~~Aa-~~~k~~~lELGGk~p~IV~~dAdl~~Av~~~~~g~f~n~GQ~C~a~~R~~V~~~v~d~f~~~l~~~-~ 300 (472)
T COG1012 223 AVGRAIAAAAA-ANLKPVTLELGGKSPAIVLEDADLDAAVDAAVFGAFFNAGQRCTAASRLIVHESVYDEFVERLVAR-A 300 (472)
T ss_pred HHHHHHHHHHh-hcCCcEEEECCCCCCeEECCCCCHHHHHHHHHHHHHhCCCCCccCCeEEEEehhhHHHHHHHHHHH-H
Confidence 99999999998 999999999999999999999999999999999999999999999999999999999999999999 6
Q ss_pred h-cccCCCCCCCCcccccCCHHHHHHHHHHHHHHHHcCCEEEeCCcccCCCCceeeeEEEeeCCCcccccccceecceEE
Q 015042 241 A-WLVGDPFDPTVRQGPQISERHFDRILSYIEHGKREGATLLTGGKPIGDKGYYIEPTIFTNVKEDMIIAKEEIFGPVMA 319 (414)
Q Consensus 241 ~-~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~ 319 (414)
+ +++||+.|+.+++||+++..++++++++|++++++|+++++||. ... |+|++|||+.+++++|.+++||+||||++
T Consensus 301 ~~l~~Gd~~d~~t~~Gpli~~~~~~~v~~~i~~a~~~G~~~~~Gg~-~~~-g~~~~PTv~~~v~~~~~i~~eEiFGPVl~ 378 (472)
T COG1012 301 ASLKVGDPLDPSTDLGPLISEEQLDRVEGYIEDAVAEGARLLAGGK-RPG-GYFVEPTILEGVTPDMRIAREEIFGPVLP 378 (472)
T ss_pred hcCCCCCCCCCCCccCCCCCHHHHHHHHHHHHHHHHcCCEEEeCCc-CCC-CeEECCEEEecCCCCChhhhccccCCceE
Confidence 5 99999889999999999999999999999999999999999998 333 99999999999999999999999999999
Q ss_pred EEeeCCHHHHHHHhhcCCCCceEEEecCCHHHHHHHHHhcceeEEEEcCcCC--CCCCCCcccCCCCCCCccchHHHHHh
Q 015042 320 LMKFKTVEEAIKSANNTQYGLAAGIVTKDLNVANTVSRSIRAGIIWINCYFG--FSMDCPYGGYKMSGFGREYGLESLYK 397 (414)
Q Consensus 320 v~~~~~~~eai~~~n~~~~gl~~sv~s~d~~~~~~~~~~l~~g~v~iN~~~~--~~~~~p~gG~~~sG~g~~~g~~~~~~ 397 (414)
|++|+|+||||+++|+++|||+++|||+|..++.++++++++|+|+||+... ..+.+||||+|.||+|+++|.+++++
T Consensus 379 v~~~~~~dEAi~lAN~t~yGL~a~v~t~d~~~~~~~~~~l~aG~v~iN~~~~~~~~~~~PFGG~k~SG~G~~~g~~~~~~ 458 (472)
T COG1012 379 VIRFKDEEEAIELANDTEYGLAAAIFTRDLARAFRVARRLEAGMVGINDYTGGADIAYLPFGGVKQSGLGREGGKYGLEE 458 (472)
T ss_pred EEEeCCHHHHHHHHhCCCCCceEEEEcCCHHHHHHHHhcCCeeEEEECCCCCCCCCCCCCCCCcccccCCccchHHHHHH
Confidence 9999999999999999999999999999999999999999999999999853 44679999999999999999999999
Q ss_pred hheeeEEEeeCC
Q 015042 398 YLQIKSVVTPIY 409 (414)
Q Consensus 398 ~~~~k~i~~~~~ 409 (414)
|++.|+|..+..
T Consensus 459 ~~~~k~v~~~~~ 470 (472)
T COG1012 459 FTEVKTVTIKLG 470 (472)
T ss_pred HhcceEEEEecC
Confidence 999999987754
|
|
| >PLN02466 aldehyde dehydrogenase family 2 member | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.7e-91 Score=713.66 Aligned_cols=414 Identities=55% Similarity=0.961 Sum_probs=392.2
Q ss_pred CHHHHHHHHHhHHHHHHHHHHhcCCChHHHhhchHHHHHHHHHHHHHhhhhhcCcccccCCCcccceeecCCceEEEEcC
Q 015042 1 MWKFADLIEEHVEELAALDALDAGKVYLRAKTAEIPGAAEFLRFFAGAADKIHGEVLKMSSELQGYTLREPVGVVGHIIP 80 (414)
Q Consensus 1 L~~~a~~l~~~~~~l~~~~~~etGk~~~e~~~~ei~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p 80 (414)
|+++++.|++|+++|++++++|+|||..++...|+..+++.+++++.+.++..+..++...+...+.+++|+|||++|+|
T Consensus 125 L~~~a~~l~~~~~ela~~~~~e~GK~~~~a~~~Ev~~~~~~l~~~a~~~~~~~g~~~~~~~~~~~~~~~~P~GVV~~I~P 204 (538)
T PLN02466 125 LLRFADLLEKHNDELAALETWDNGKPYEQSAKAELPMFARLFRYYAGWADKIHGLTVPADGPHHVQTLHEPIGVAGQIIP 204 (538)
T ss_pred HHHHHHHHHHhHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCcccccCCCceEEEEEecceEEEEECC
Confidence 57899999999999999999999999987666799999999999999887776654443333456889999999999999
Q ss_pred CccchHHHHHhHHHHHhhCCeEEeecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhhHHHhhhCCCccEEEEeCCc
Q 015042 81 WNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLTALYYAHLAKLAGIPDGVLNVVPGFGPTAGAAICSHMDIDYVCFTGST 160 (414)
Q Consensus 81 ~n~P~~~~~~~~~~aLaaGN~vv~kps~~~~~~~~~l~~~l~~aG~p~g~v~~v~~~~~~~~~~l~~~~~v~~v~~tGs~ 160 (414)
||||+...++++++||++||+||+|||+.+|.++..+.++|.++|+|+|+||++++++.+.++.|+.||++|.|.||||+
T Consensus 205 wN~P~~l~~~~i~pALaaGN~VVlKPs~~tp~~~~~l~~ll~eaGlP~gvv~vv~g~~~~~~~~L~~~~~vd~V~FTGS~ 284 (538)
T PLN02466 205 WNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYAAKLLHEAGLPPGVLNVVSGFGPTAGAALASHMDVDKLAFTGST 284 (538)
T ss_pred CchHHHHHHHHHhHHHHcCCEEEeECCCCCcHHHHHHHHHHHhcCCCcccEEEEecCchhHHHHHhcCCCcCEEEEECCH
Confidence 99999999999999999999999999999999999999999999999999999999777889999999999999999999
Q ss_pred HHHHHHHHHHHhcccceeEEEcCCCCCceEcCCCCHHHHHHHHHHHhhccCCCCcccCceEEEeCchHHHHHHHHHHHHh
Q 015042 161 DVGRLVMQAAAASNLKQVSLELGGKSPLLIFDDADLDTAADVALLGNLYNKGEICVASSRVFVQEGIYDKFEKKLLEKAK 240 (414)
Q Consensus 161 ~~g~~i~~~~a~~~~~~~~~e~gg~~~~iV~~dadl~~aa~~i~~~~~~~~Gq~C~a~~~i~V~~~i~d~f~~~l~~~~~ 240 (414)
.+|+.|++.+++.+++|+++|+|||||+||++|||++.|++.+++++|.|+||.|+++++||||+++||+|+++|++++.
T Consensus 285 ~~G~~v~~~aa~~~l~pv~lElGGknp~iV~~dADl~~Aa~~i~~~~f~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~ 364 (538)
T PLN02466 285 DTGKIVLELAAKSNLKPVTLELGGKSPFIVCEDADVDKAVELAHFALFFNQGQCCCAGSRTFVHERVYDEFVEKAKARAL 364 (538)
T ss_pred HHHHHHHHHHHhcCCCcEEEEcCCCCeEEEcCCCCHHHHHHHHHHHHHhhcCCCcCcCcEEEEcHHHHHHHHHHHHHHHH
Confidence 99999999887448899999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hcccCCCCCCCCcccccCCHHHHHHHHHHHHHHHHcCCEEEeCCcccCCCCceeeeEEEeeCCCcccccccceecceEEE
Q 015042 241 AWLVGDPFDPTVRQGPQISERHFDRILSYIEHGKREGATLLTGGKPIGDKGYYIEPTIFTNVKEDMIIAKEEIFGPVMAL 320 (414)
Q Consensus 241 ~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v 320 (414)
++++|+|.++++++||+++..+++++++++++++++|+++++||...++.|+|+.|||+.+++++|.+++||+||||++|
T Consensus 365 ~~~vG~p~~~~~~~Gpli~~~~~~~v~~~v~~a~~~Ga~v~~gg~~~~~~g~~i~Ptvl~~v~~d~~i~~eE~FGPVl~v 444 (538)
T PLN02466 365 KRVVGDPFKKGVEQGPQIDSEQFEKILRYIKSGVESGATLECGGDRFGSKGYYIQPTVFSNVQDDMLIAQDEIFGPVQSI 444 (538)
T ss_pred hccCCCCccCCCCCccCCCHHHHHHHHHHHHHHHHCCCEEEecCCcCCCCceEEEEEEEecCCCCCchhcCCccCcEEEE
Confidence 99999999999999999999999999999999999999999999875557899999999999999999999999999999
Q ss_pred EeeCCHHHHHHHhhcCCCCceEEEecCCHHHHHHHHHhcceeEEEEcCcCCCCCCCCcccCCCCCCCccchHHHHHhhhe
Q 015042 321 MKFKTVEEAIKSANNTQYGLAAGIVTKDLNVANTVSRSIRAGIIWINCYFGFSMDCPYGGYKMSGFGREYGLESLYKYLQ 400 (414)
Q Consensus 321 ~~~~~~~eai~~~n~~~~gl~~sv~s~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~p~gG~~~sG~g~~~g~~~~~~~~~ 400 (414)
++|+|+||||+++|+++|||++||||+|.+.++++++++++|+|+||++....+.+||||+|.||+|+++|++|+++|++
T Consensus 445 ~~~~d~deAi~~aN~~~~GL~a~VfT~d~~~a~~~~~~l~aG~v~IN~~~~~~~~~PfGG~k~SG~G~~~G~~gl~~ft~ 524 (538)
T PLN02466 445 LKFKDLDEVIRRANNTRYGLAAGVFTQNLDTANTLSRALRVGTVWVNCFDVFDAAIPFGGYKMSGIGREKGIYSLNNYLQ 524 (538)
T ss_pred EEeCCHHHHHHHHhCCCCCceEEEEcCCHHHHHHHHHhCCeeeEEECCCCCCCCCCCcCCCCcCccCcccHHHHHHHhcc
Confidence 99999999999999999999999999999999999999999999999887777889999999999999999999999999
Q ss_pred eeEEEeeCCCCCCC
Q 015042 401 IKSVVTPIYNSPWL 414 (414)
Q Consensus 401 ~k~i~~~~~~~~~~ 414 (414)
+|+|+.+..+..|+
T Consensus 525 ~k~v~~~~~~~~~~ 538 (538)
T PLN02466 525 VKAVVTPLKNPAWL 538 (538)
T ss_pred eEEEEEeCCCCCCC
Confidence 99999999999996
|
|
| >PRK10090 aldehyde dehydrogenase A; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.3e-91 Score=690.75 Aligned_cols=406 Identities=36% Similarity=0.610 Sum_probs=383.9
Q ss_pred CHHHHHHHHHhHHHHHHHHHHhcCCChHHHhhchHHHHHHHHHHHHHhhhhhcCcccccC-CCcccceeecCCceEEEEc
Q 015042 1 MWKFADLIEEHVEELAALDALDAGKVYLRAKTAEIPGAAEFLRFFAGAADKIHGEVLKMS-SELQGYTLREPVGVVGHII 79 (414)
Q Consensus 1 L~~~a~~l~~~~~~l~~~~~~etGk~~~e~~~~ei~~~~~~l~~~a~~~~~~~~~~~~~~-~~~~~~~~~~P~Gvv~~i~ 79 (414)
|+++++.|++|+++|++++++|+|||..|+. .|+..+++.+++++.+++...+...+.. .+...+.+++|+|||++|+
T Consensus 1 L~~~a~~l~~~~~el~~~~~~e~Gk~~~ea~-~Ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~ 79 (409)
T PRK10090 1 LRKIAAGIRERASEISALIVEEGGKIQQLAE-VEVAFTADYIDYMAEWARRYEGEIIQSDRPGENILLFKRALGVTTGIL 79 (409)
T ss_pred CHHHHHHHHHCHHHHHHHHHHhcCCCHHHHH-HHHHHHHHHHHHHHHHHHHhcCcccCCCCCCceeEEEEecccEEEEEC
Confidence 7899999999999999999999999999865 6999999999999999877655433322 3446788999999999999
Q ss_pred CCccchHHHHHhHHHHHhhCCeEEeecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhhHHHhhhCCCccEEEEeCC
Q 015042 80 PWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLTALYYAHLAKLAGIPDGVLNVVPGFGPTAGAAICSHMDIDYVCFTGS 159 (414)
Q Consensus 80 p~n~P~~~~~~~~~~aLaaGN~vv~kps~~~~~~~~~l~~~l~~aG~p~g~v~~v~~~~~~~~~~l~~~~~v~~v~~tGs 159 (414)
|||||+...++++++||++||+||+|||+.+|.++..+.+++.++|+|+|+++++++++.+.++.|+.|+++|+|.||||
T Consensus 80 p~N~P~~~~~~~~~~ALaaGN~VvlKps~~~p~~~~~l~~~~~~aglP~gv~~~v~g~~~~~~~~l~~~~~v~~V~ftGs 159 (409)
T PRK10090 80 PWNFPFFLIARKMAPALLTGNTIVIKPSEFTPNNAIAFAKIVDEIGLPKGVFNLVLGRGETVGQELAGNPKVAMVSMTGS 159 (409)
T ss_pred CCchHHHHHHHHHHHHHHcCCEEEEECCCcChHHHHHHHHHHHHcCCCcccEEEEeCCChhHHHHHhcCCCcCEEEEECC
Confidence 99999999999999999999999999999999999999999999999999999999977788999999999999999999
Q ss_pred cHHHHHHHHHHHhcccceeEEEcCCCCCceEcCCCCHHHHHHHHHHHhhccCCCCcccCceEEEeCchHHHHHHHHHHHH
Q 015042 160 TDVGRLVMQAAAASNLKQVSLELGGKSPLLIFDDADLDTAADVALLGNLYNKGEICVASSRVFVQEGIYDKFEKKLLEKA 239 (414)
Q Consensus 160 ~~~g~~i~~~~a~~~~~~~~~e~gg~~~~iV~~dadl~~aa~~i~~~~~~~~Gq~C~a~~~i~V~~~i~d~f~~~l~~~~ 239 (414)
+.+|+.|++.++ .+++|+++|+|||||+||++|||++.|++.+++++|.|+||.|+++++||||++++|+|+++|++.+
T Consensus 160 ~~~g~~v~~~aa-~~~~~~~lElgGk~p~iV~~dADld~aa~~iv~~~f~~~GQ~C~a~~rv~V~~~i~~~f~~~l~~~~ 238 (409)
T PRK10090 160 VSAGEKIMAAAA-KNITKVCLELGGKAPAIVMDDADLDLAVKAIVDSRVINSGQVCNCAERVYVQKGIYDQFVNRLGEAM 238 (409)
T ss_pred HHHHHHHHHHHH-hcCCeEEEECCCCCeEEEcCCCCHHHHHHHHHHHHHHhcCCCCCCCeEEEEcHHHHHHHHHHHHHHH
Confidence 999999999888 8999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhcccCCCCCC-CCcccccCCHHHHHHHHHHHHHHHHcCCEEEeCCcccCCCCceeeeEEEeeCCCcccccccceecceE
Q 015042 240 KAWLVGDPFDP-TVRQGPQISERHFDRILSYIEHGKREGATLLTGGKPIGDKGYYIEPTIFTNVKEDMIIAKEEIFGPVM 318 (414)
Q Consensus 240 ~~~~~g~~~~~-~~~~gpl~~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl 318 (414)
+++++|+|.++ ++++||++++.+++++++++++++++|+++++||......|+|++|||+.+++++|++++||+||||+
T Consensus 239 ~~~~~G~p~~~~~~~~gpli~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~~~g~~~~Ptvl~~v~~~~~i~~eE~FgPvl 318 (409)
T PRK10090 239 QAVQFGNPAERNDIAMGPLINAAALERVEQKVARAVEEGARVALGGKAVEGKGYYYPPTLLLDVRQEMSIMHEETFGPVL 318 (409)
T ss_pred HhcCCCCCCCcccCccccccCHHHHHHHHHHHHHHHHCCCEEEeCCCcCCCCCeEEecEEEeCCCCCCHHHhCCCCCceE
Confidence 99999999998 89999999999999999999999999999999998765568999999999999999999999999999
Q ss_pred EEEeeCCHHHHHHHhhcCCCCceEEEecCCHHHHHHHHHhcceeEEEEcCcCCCCCCCCcccCCCCCCCccchHHHHHhh
Q 015042 319 ALMKFKTVEEAIKSANNTQYGLAAGIVTKDLNVANTVSRSIRAGIIWINCYFGFSMDCPYGGYKMSGFGREYGLESLYKY 398 (414)
Q Consensus 319 ~v~~~~~~~eai~~~n~~~~gl~~sv~s~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~p~gG~~~sG~g~~~g~~~~~~~ 398 (414)
+|++|+|++|||+++|+++|||++||||+|.+.++++++++++|.|+||+.....+..||||+|.||+|+++|.+|+++|
T Consensus 319 ~v~~~~~~~eai~~~n~~~~gL~~~vft~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~pfGG~k~SG~G~~~g~~gl~~f 398 (409)
T PRK10090 319 PVVAFDTLEEAIAMANDSDYGLTSSIYTQNLNVAMKAIKGLKFGETYINRENFEAMQGFHAGWRKSGIGGADGKHGLHEY 398 (409)
T ss_pred EEEEECCHHHHHHHHhCCCCCceEEEEcCCHHHHHHHHHhCCcceEEECCCCCCCCCCCcCCcccccCCccchHHHHHHh
Confidence 99999999999999999999999999999999999999999999999999877666679999999999999999999999
Q ss_pred heeeEEEeeC
Q 015042 399 LQIKSVVTPI 408 (414)
Q Consensus 399 ~~~k~i~~~~ 408 (414)
+++|+|+++.
T Consensus 399 ~~~k~v~~~~ 408 (409)
T PRK10090 399 LQTQVVYLQS 408 (409)
T ss_pred cceEEEEEec
Confidence 9999997653
|
|
| >PLN02419 methylmalonate-semialdehyde dehydrogenase [acylating] | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.1e-90 Score=705.61 Aligned_cols=404 Identities=35% Similarity=0.492 Sum_probs=379.2
Q ss_pred CHHHHHHHHHhHHHHHHHHHHhcCCChHHHhhchHHHHHHHHHHHHHhhhhhcCcccccC-CCcccceeecCCceEEEEc
Q 015042 1 MWKFADLIEEHVEELAALDALDAGKVYLRAKTAEIPGAAEFLRFFAGAADKIHGEVLKMS-SELQGYTLREPVGVVGHII 79 (414)
Q Consensus 1 L~~~a~~l~~~~~~l~~~~~~etGk~~~e~~~~ei~~~~~~l~~~a~~~~~~~~~~~~~~-~~~~~~~~~~P~Gvv~~i~ 79 (414)
|+++++.|++|+++|++++++|+|||..++. .|+..+++.+++++.++....+...+.. .+...+++++|+|||++|+
T Consensus 179 L~k~a~~L~~~~~ela~~~~~E~GKp~~ea~-~EV~~~i~~~~~~a~~a~~~~g~~~~~~~~~~~~~~~reP~GVV~~I~ 257 (604)
T PLN02419 179 MLKFQELIRKNMDKLAMNITTEQGKTLKDSH-GDIFRGLEVVEHACGMATLQMGEYLPNVSNGVDTYSIREPLGVCAGIC 257 (604)
T ss_pred HHHHHHHHHHhHHHHHHHHHHHhCCCHHHHH-HHHHHHHHHHHHHHHHHHHhhCCcccccCCCccceEEecCccEEEEEC
Confidence 5789999999999999999999999999764 6999999999999998876655443322 3445788999999999999
Q ss_pred CCccchHHHHHhHHHHHhhCCeEEeecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhhHHHhhhCCCccEEEEeCC
Q 015042 80 PWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLTALYYAHLAKLAGIPDGVLNVVPGFGPTAGAAICSHMDIDYVCFTGS 159 (414)
Q Consensus 80 p~n~P~~~~~~~~~~aLaaGN~vv~kps~~~~~~~~~l~~~l~~aG~p~g~v~~v~~~~~~~~~~l~~~~~v~~v~~tGs 159 (414)
|||||+...++++++||++||+||+|||+.+|.++..+++++.++|+|+|+||+++|+ .+.++.|+.|++||+|.||||
T Consensus 258 PwNfPl~l~~~~iapALaAGNtVVlKPSe~tp~ta~~l~~l~~eAGlP~GvvnvV~G~-~~~~~~L~~~~~Vd~V~FTGS 336 (604)
T PLN02419 258 PFNFPAMIPLWMFPVAVTCGNTFILKPSEKDPGASVILAELAMEAGLPDGVLNIVHGT-NDTVNAICDDEDIRAVSFVGS 336 (604)
T ss_pred CCccHHHHHHHHHHHHHHcCCEEEEeCCCCCcHHHHHHHHHHHHhCcCcceEEEEeCC-hHHHHHHHhCCCCCEEEEeCC
Confidence 9999999999999999999999999999999999999999999999999999999985 467899999999999999999
Q ss_pred cHHHHHHHHHHHhcccceeEEEcCCCCCceEcCCCCHHHHHHHHHHHhhccCCCCcccCceEEEeCchHHHHHHHHHHHH
Q 015042 160 TDVGRLVMQAAAASNLKQVSLELGGKSPLLIFDDADLDTAADVALLGNLYNKGEICVASSRVFVQEGIYDKFEKKLLEKA 239 (414)
Q Consensus 160 ~~~g~~i~~~~a~~~~~~~~~e~gg~~~~iV~~dadl~~aa~~i~~~~~~~~Gq~C~a~~~i~V~~~i~d~f~~~l~~~~ 239 (414)
..+|+.|++.++ .+++|+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||++ +|+|+++|++++
T Consensus 337 t~vG~~I~~~Aa-~~lk~v~LELGGknp~IV~~DADld~Aa~~iv~g~f~naGQ~C~A~~Rv~V~~~-~d~f~e~l~~~~ 414 (604)
T PLN02419 337 NTAGMHIYARAA-AKGKRIQSNMGAKNHGLVLPDANIDATLNALLAAGFGAAGQRCMALSTVVFVGD-AKSWEDKLVERA 414 (604)
T ss_pred hHHHHHHHHHHh-ccCCcEEEecCCCCeEEEcCCCCHHHHHHHHHHHHHhhCCCCcCCCCEEEEeCc-HHHHHHHHHHHH
Confidence 999999999988 889999999999999999999999999999999999999999999999999999 999999999999
Q ss_pred hhcccCCCCCCCCcccccCCHHHHHHHHHHHHHHHHcCCEEEeCCccc----CCCCceeeeEEEeeCCCcccccccceec
Q 015042 240 KAWLVGDPFDPTVRQGPQISERHFDRILSYIEHGKREGATLLTGGKPI----GDKGYYIEPTIFTNVKEDMIIAKEEIFG 315 (414)
Q Consensus 240 ~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ga~v~~gg~~~----~~~g~~~~Ptvl~~~~~~~~~~~~E~fg 315 (414)
+++++|+|.|+++++||++++.+++++.+++++++++|+++++||... .+.|+|++|||+.+++++|.+++||+||
T Consensus 415 ~~l~vG~p~d~~t~~GPlis~~~~~~v~~~i~~A~~~GAkvl~GG~~~~~~~~~~G~f~~PTVL~~v~~d~~i~~eEiFG 494 (604)
T PLN02419 415 KALKVTCGSEPDADLGPVISKQAKERICRLIQSGVDDGAKLLLDGRDIVVPGYEKGNFIGPTILSGVTPDMECYKEEIFG 494 (604)
T ss_pred HHhccCCCCCCCCCccCCCCHHHHHHHHHHHHHHHhcCCEEEeCCccccCCCCCCCeEEeeEEEeCCCCCCHHHcCCCcC
Confidence 999999999999999999999999999999999999999999999752 1368999999999999999999999999
Q ss_pred ceEEEEeeCCHHHHHHHhhcCCCCceEEEecCCHHHHHHHHHhcceeEEEEcCcCC-CCCCCCcccCCCCCCC--ccchH
Q 015042 316 PVMALMKFKTVEEAIKSANNTQYGLAAGIVTKDLNVANTVSRSIRAGIIWINCYFG-FSMDCPYGGYKMSGFG--REYGL 392 (414)
Q Consensus 316 Pvl~v~~~~~~~eai~~~n~~~~gl~~sv~s~d~~~~~~~~~~l~~g~v~iN~~~~-~~~~~p~gG~~~sG~g--~~~g~ 392 (414)
||++|++|+|+||||+++|+++|||++||||+|.+.++++++++++|.|+||+... ..+.+||||+|.||+| +++|.
T Consensus 495 PVl~V~~~~~~dEAI~laN~s~yGLaasVfT~d~~~a~~~a~~l~aG~V~IN~~~~~~~~~~PFGG~k~SG~G~~~~~G~ 574 (604)
T PLN02419 495 PVLVCMQANSFDEAISIINKNKYGNGAAIFTSSGAAARKFQMDIEAGQIGINVPIPVPLPFFSFTGNKASFAGDLNFYGK 574 (604)
T ss_pred CEEEEEecCCHHHHHHHHhCCCCCcEEEEECCCHHHHHHHHHhCCeeeEEEcCCCCCCCCCCCcCCcCcCCCCCCcccHH
Confidence 99999999999999999999999999999999999999999999999999998743 3467999999999999 79999
Q ss_pred HHHHhhheeeEEEeeC
Q 015042 393 ESLYKYLQIKSVVTPI 408 (414)
Q Consensus 393 ~~~~~~~~~k~i~~~~ 408 (414)
+|+++|+++|+|+++.
T Consensus 575 ~gl~~ft~~K~v~~~~ 590 (604)
T PLN02419 575 AGVDFFTQIKLVTQKQ 590 (604)
T ss_pred HHHHHhhCeEEEEEcc
Confidence 9999999999998765
|
|
| >PLN02174 aldehyde dehydrogenase family 3 member H1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.4e-90 Score=692.21 Aligned_cols=400 Identities=25% Similarity=0.396 Sum_probs=370.7
Q ss_pred CHHHHHHHHHhHHHHHHHHHHhcCCChHHHhhchHHHHHHHHHHHHHhhhhhcCc----ccccCCCcccceeecCCceEE
Q 015042 1 MWKFADLIEEHVEELAALDALDAGKVYLRAKTAEIPGAAEFLRFFAGAADKIHGE----VLKMSSELQGYTLREPVGVVG 76 (414)
Q Consensus 1 L~~~a~~l~~~~~~l~~~~~~etGk~~~e~~~~ei~~~~~~l~~~a~~~~~~~~~----~~~~~~~~~~~~~~~P~Gvv~ 76 (414)
|+++++.|++|+++|+++++.|+|||..++...|+..+++.++++++..++..+. ......+...+++++|+|||+
T Consensus 38 L~~~a~~l~~~~~ela~~l~~e~GKp~~~a~~~Ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~ 117 (484)
T PLN02174 38 LKKLMIICDNHEPEIVAALRDDLGKPELESSVYEVSLLRNSIKLALKQLKNWMAPEKAKTSLTTFPASAEIVSEPLGVVL 117 (484)
T ss_pred HHHHHHHHHHhHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccccccccCCcceEEEEecceEEE
Confidence 5789999999999999999999999998876669999999999999987765441 111112345789999999999
Q ss_pred EEcCCccchHHHHHhHHHHHhhCCeEEeecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhhHHHhhhCCCccEEEE
Q 015042 77 HIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLTALYYAHLAKLAGIPDGVLNVVPGFGPTAGAAICSHMDIDYVCF 156 (414)
Q Consensus 77 ~i~p~n~P~~~~~~~~~~aLaaGN~vv~kps~~~~~~~~~l~~~l~~aG~p~g~v~~v~~~~~~~~~~l~~~~~v~~v~~ 156 (414)
+|+|||||+...++++++||++||+||+|||+.+|+++..+.+++.+ ++|+|++++++| +.+.+..|+. +++|+|.|
T Consensus 118 ~I~PwN~P~~~~~~~~~~ALaaGN~VVlKPse~tp~~~~~l~~l~~~-~lp~gvv~vv~G-~~~~~~~l~~-~~vd~V~F 194 (484)
T PLN02174 118 VISAWNYPFLLSIDPVIGAISAGNAVVLKPSELAPASSALLAKLLEQ-YLDSSAVRVVEG-AVTETTALLE-QKWDKIFY 194 (484)
T ss_pred EECCCccHHHHHHHHHHHHHHcCCEEEEECCCCCHHHHHHHHHHHHH-hCCCCEEEEEEC-ChHHHHHHhc-ccCCEEEE
Confidence 99999999999999999999999999999999999999999999999 699999999998 4455677776 88999999
Q ss_pred eCCcHHHHHHHHHHHhcccceeEEEcCCCCCceEcCCCCHHHHHHHHHHHhh-ccCCCCcccCceEEEeCchHHHHHHHH
Q 015042 157 TGSTDVGRLVMQAAAASNLKQVSLELGGKSPLLIFDDADLDTAADVALLGNL-YNKGEICVASSRVFVQEGIYDKFEKKL 235 (414)
Q Consensus 157 tGs~~~g~~i~~~~a~~~~~~~~~e~gg~~~~iV~~dadl~~aa~~i~~~~~-~~~Gq~C~a~~~i~V~~~i~d~f~~~l 235 (414)
|||+.+|+.|++.++ .+++|+++|+|||||+||++|||++.|++.+++++| .|+||.|++++|||||++++|+|+++|
T Consensus 195 TGS~~~G~~I~~~aa-~~l~~v~LELGGk~p~iV~~dADl~~Aa~~i~~g~f~~n~GQ~C~a~~rv~V~~~i~d~f~~~l 273 (484)
T PLN02174 195 TGSSKIGRVIMAAAA-KHLTPVVLELGGKSPVVVDSDTDLKVTVRRIIAGKWGCNNGQACISPDYILTTKEYAPKVIDAM 273 (484)
T ss_pred ECChHHHHHHHHHHH-hcCCcEEEecCCCCeEEEcCCCCHHHHHHHHHHHHhhCCCCCCCCcCcEEEEeHHHHHHHHHHH
Confidence 999999999999988 899999999999999999999999999999999999 699999999999999999999999999
Q ss_pred HHHHhhcccCCCCCCCCcccccCCHHHHHHHHHHHHHHHHcCCEEEeCCcccCCCCceeeeEEEeeCCCcccccccceec
Q 015042 236 LEKAKAWLVGDPFDPTVRQGPQISERHFDRILSYIEHGKREGATLLTGGKPIGDKGYYIEPTIFTNVKEDMIIAKEEIFG 315 (414)
Q Consensus 236 ~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fg 315 (414)
+++++++++|+|.+ ++++||++++.+++++.++|+++ .+|+++++||... ..|+|++|||+.+++++|.+++||+||
T Consensus 274 ~~~~~~~~~G~p~~-~~~~Gpli~~~~~~~v~~~i~~a-~~ga~~~~GG~~~-~~g~~~~PTvl~~v~~~~~i~~eEiFG 350 (484)
T PLN02174 274 KKELETFYGKNPME-SKDMSRIVNSTHFDRLSKLLDEK-EVSDKIVYGGEKD-RENLKIAPTILLDVPLDSLIMSEEIFG 350 (484)
T ss_pred HHHHHhhcCCCCcc-cCCcCCCCCHHHHHHHHHHHHHH-HcCCEEEECCCcC-CCCCEEEEEEEecCCCCChhhcCCcCC
Confidence 99999999999987 78999999999999999999998 7789999999763 368999999999999999999999999
Q ss_pred ceEEEEeeCCHHHHHHHhhcCCCCceEEEecCCHHHHHHHHHhcceeEEEEcCcCCCC--CCCCcccCCCCCCCccchHH
Q 015042 316 PVMALMKFKTVEEAIKSANNTQYGLAAGIVTKDLNVANTVSRSIRAGIIWINCYFGFS--MDCPYGGYKMSGFGREYGLE 393 (414)
Q Consensus 316 Pvl~v~~~~~~~eai~~~n~~~~gl~~sv~s~d~~~~~~~~~~l~~g~v~iN~~~~~~--~~~p~gG~~~sG~g~~~g~~ 393 (414)
||++|++|+|.||||+++|+++|||++||||+|.+.++++++++++|.|+||++.... +.+||||+|.||+|+++|.+
T Consensus 351 PVl~v~~~~~~~eai~~aN~~~~gLaa~vft~d~~~a~~~~~~l~aG~v~IN~~~~~~~~~~~PfGG~k~SG~Gr~~G~~ 430 (484)
T PLN02174 351 PLLPILTLNNLEESFDVIRSRPKPLAAYLFTHNKKLKERFAATVSAGGIVVNDIAVHLALHTLPFGGVGESGMGAYHGKF 430 (484)
T ss_pred CeEEEecCCCHHHHHHHHhCCCCCeEEEEEcCCHHHHHHHHHcCCcceEEECCCcCCCCCCCCCCCCcCccccCccchHH
Confidence 9999999999999999999999999999999999999999999999999999986543 67899999999999999999
Q ss_pred HHHhhheeeEEEee
Q 015042 394 SLYKYLQIKSVVTP 407 (414)
Q Consensus 394 ~~~~~~~~k~i~~~ 407 (414)
|+++||+.|+|+++
T Consensus 431 gl~~ft~~K~v~~~ 444 (484)
T PLN02174 431 SFDAFSHKKAVLYR 444 (484)
T ss_pred HHHHhcceEEEEEC
Confidence 99999999999875
|
|
| >TIGR03374 ABALDH 1-pyrroline dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.4e-90 Score=696.19 Aligned_cols=405 Identities=37% Similarity=0.650 Sum_probs=380.1
Q ss_pred CHHHHHHHHHhHHHHHHHHHHhcCCChHHHhhchHHHHHHHHHHHHHhhhhhcCccccc-CCCcccceeecCCceEEEEc
Q 015042 1 MWKFADLIEEHVEELAALDALDAGKVYLRAKTAEIPGAAEFLRFFAGAADKIHGEVLKM-SSELQGYTLREPVGVVGHII 79 (414)
Q Consensus 1 L~~~a~~l~~~~~~l~~~~~~etGk~~~e~~~~ei~~~~~~l~~~a~~~~~~~~~~~~~-~~~~~~~~~~~P~Gvv~~i~ 79 (414)
|+++++.|++|+++|++++++|+|||..+....|+..+++.+++++.....+.+...+. ..+...++.++|+|||++|+
T Consensus 66 L~~~a~~l~~~~~ela~~~~~e~Gk~~~~~~~~ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVV~~I~ 145 (472)
T TIGR03374 66 LLKLADVIEENAQVFAELESRNCGKPLHSVFNDEIPAIVDVFRFFAGAARCLSGLAAGEYLEGHTSMIRRDPLGVVASIA 145 (472)
T ss_pred HHHHHHHHHHhHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCcccCccCCCceEEEEEecceEEEEEC
Confidence 57899999999999999999999999987655699999999999998776554432221 12445788999999999999
Q ss_pred CCccchHHHHHhHHHHHhhCCeEEeecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhhHHHhhhCCCccEEEEeCC
Q 015042 80 PWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLTALYYAHLAKLAGIPDGVLNVVPGFGPTAGAAICSHMDIDYVCFTGS 159 (414)
Q Consensus 80 p~n~P~~~~~~~~~~aLaaGN~vv~kps~~~~~~~~~l~~~l~~aG~p~g~v~~v~~~~~~~~~~l~~~~~v~~v~~tGs 159 (414)
|||||+...++++++||++||+||+|||+.+|.++..+++++.++ +|+|++|++++++.++++.|+.||++|+|.||||
T Consensus 146 PwN~P~~~~~~~~~~ALaaGN~VV~KPs~~tp~~~~~l~~l~~~~-lP~gv~~~v~g~~~~~~~~L~~~~~v~~V~fTGS 224 (472)
T TIGR03374 146 PWNYPLMMAAWKLAPALAAGNCVVLKPSEITPLTALKLAELAKDI-FPAGVVNILFGRGKTVGDPLTGHEKVRMVSLTGS 224 (472)
T ss_pred CCCchHHHHHHHHHHHHhcCCEEEecCCCCCCHHHHHHHHHHHHh-CCcCeEEEEecCchhHHHHHhcCCCcCEEEEECC
Confidence 999999999999999999999999999999999999999999885 9999999999977788999999999999999999
Q ss_pred cHHHHHHHHHHHhcccceeEEEcCCCCCceEcCCCCHHHHHHHHHHHhhccCCCCcccCceEEEeCchHHHHHHHHHHHH
Q 015042 160 TDVGRLVMQAAAASNLKQVSLELGGKSPLLIFDDADLDTAADVALLGNLYNKGEICVASSRVFVQEGIYDKFEKKLLEKA 239 (414)
Q Consensus 160 ~~~g~~i~~~~a~~~~~~~~~e~gg~~~~iV~~dadl~~aa~~i~~~~~~~~Gq~C~a~~~i~V~~~i~d~f~~~l~~~~ 239 (414)
..+|+.|++.++ ++++|+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||++++|+|+++|++++
T Consensus 225 ~~~G~~i~~~aa-~~~~~~~lElGGk~p~iV~~dadl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~~~f~~~l~~~~ 303 (472)
T TIGR03374 225 IATGEHILSHTA-PSIKRTHMELGGKAPVIVFDDADIDAVVEGVRTFGFYNAGQDCTAACRIYAQRGIYDTLVEKLGAAV 303 (472)
T ss_pred HHHHHHHHHHHh-hcccceEEecCCCCeeEECCCCCHHHHHHHHHHHHHhhcCCccccCCEEEEcHHHHHHHHHHHHHHH
Confidence 999999999988 8899999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhcccCCCCCCCCcccccCCHHHHHHHHHHHHHHHHcC-CEEEeCCcccCCCCceeeeEEEeeCCCcccccccceecceE
Q 015042 240 KAWLVGDPFDPTVRQGPQISERHFDRILSYIEHGKREG-ATLLTGGKPIGDKGYYIEPTIFTNVKEDMIIAKEEIFGPVM 318 (414)
Q Consensus 240 ~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~g-a~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl 318 (414)
+++++|+|.++++++||+++..+++++.++|++++++| +++++||....+.|+|+.|||+.+++++|++++||+||||+
T Consensus 304 ~~l~~G~p~~~~~~~Gpli~~~~~~~v~~~i~~a~~~G~a~v~~gg~~~~~~g~~~~Ptvl~~v~~~~~i~~eE~FGPvl 383 (472)
T TIGR03374 304 ATLKSGAPDDESTELGPLSSLAHLERVMKAVEEAKALGHIKVITGGEKRKGNGYYFAPTLLAGAKQDDAIVQKEVFGPVV 383 (472)
T ss_pred hcCCCCCCCCCCCcCCCCCCHHHHHHHHHHHHHHHHcCCeEEEeCCccCCCCCeEEeeEEEeCCCCCChhhhCCccCceE
Confidence 99999999999999999999999999999999999999 79999997654468999999999999999999999999999
Q ss_pred EEEeeCCHHHHHHHhhcCCCCceEEEecCCHHHHHHHHHhcceeEEEEcCcCCCCCCCCcccCCCCCCCccchHHHHHhh
Q 015042 319 ALMKFKTVEEAIKSANNTQYGLAAGIVTKDLNVANTVSRSIRAGIIWINCYFGFSMDCPYGGYKMSGFGREYGLESLYKY 398 (414)
Q Consensus 319 ~v~~~~~~~eai~~~n~~~~gl~~sv~s~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~p~gG~~~sG~g~~~g~~~~~~~ 398 (414)
+|++|+|.|||++++|+++|||++||||+|.++++++++++++|.|+||+.....+.+||||+|.||+|+++|++|+++|
T Consensus 384 ~v~~~~~~~eai~~an~~~~gL~a~vft~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~PfGG~k~SG~G~~~g~~~l~~~ 463 (472)
T TIGR03374 384 SITSFDDEEQVVNWANDSQYGLASSVWTKDVGRAHRLSARLQYGCTWVNTHFMLVSEMPHGGQKLSGYGKDMSLYGLEDY 463 (472)
T ss_pred EEEEECCHHHHHHHHhCCCCCceEEEECCCHHHHHHHHHhCCcceEEECCCCCCCCCCCCCCCccCccCccchHHHHHHh
Confidence 99999999999999999999999999999999999999999999999999877778899999999999999999999999
Q ss_pred heeeEEEee
Q 015042 399 LQIKSVVTP 407 (414)
Q Consensus 399 ~~~k~i~~~ 407 (414)
|+.|+|+++
T Consensus 464 t~~k~i~~~ 472 (472)
T TIGR03374 464 TVVRHIMVK 472 (472)
T ss_pred hceEEEEEC
Confidence 999998753
|
Members of this protein family are 1-pyrroline dehydrogenase (1.5.1.35), also called gamma-aminobutyraldehyde dehydrogenase. This enzyme can follow putrescine transaminase (EC 2.6.1.82) for a two-step conversion of putrescine to gamma-aminobutyric acid (GABA). The member from Escherichia coli is characterized as a homotetramer that binds one NADH per momomer. This enzyme belongs to the medium-chain aldehyde dehydrogenases, and is quite similar in sequence to the betaine aldehyde dehydrogenase (EC 1.2.1.8) family. |
| >cd07140 ALDH_F1L_FTFDH 10-formyltetrahydrofolate dehydrogenase, ALDH family 1L | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-89 Score=697.29 Aligned_cols=407 Identities=45% Similarity=0.830 Sum_probs=382.7
Q ss_pred CHHHHHHHHHhHHHHHHHHHHhcCCChHHHhhchHHHHHHHHHHHHHhhhhhcCcccccC----CCcccceeecCCceEE
Q 015042 1 MWKFADLIEEHVEELAALDALDAGKVYLRAKTAEIPGAAEFLRFFAGAADKIHGEVLKMS----SELQGYTLREPVGVVG 76 (414)
Q Consensus 1 L~~~a~~l~~~~~~l~~~~~~etGk~~~e~~~~ei~~~~~~l~~~a~~~~~~~~~~~~~~----~~~~~~~~~~P~Gvv~ 76 (414)
|+++++.|++|+++|++++++|+|||..++...|+..+++.+++++.+.++..+...+.. .+...+.+++|+|||+
T Consensus 73 L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~a~~~~~~~g~~~~~~~~~~~~~~~~~~r~P~GVv~ 152 (486)
T cd07140 73 MYRLADLMEEHQEELATIESLDSGAVYTLALKTHVGMSIQTFRYFAGWCDKIQGKTIPINQARPNRNLTLTKREPIGVCG 152 (486)
T ss_pred HHHHHHHHHHhHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHHHHHHhcCccccccccCCCCceEEEEeeccceEE
Confidence 578999999999999999999999999986557999999999999988877655443321 1223578899999999
Q ss_pred EEcCCccchHHHHHhHHHHHhhCCeEEeecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhhHHHhhhCCCccEEEE
Q 015042 77 HIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLTALYYAHLAKLAGIPDGVLNVVPGFGPTAGAAICSHMDIDYVCF 156 (414)
Q Consensus 77 ~i~p~n~P~~~~~~~~~~aLaaGN~vv~kps~~~~~~~~~l~~~l~~aG~p~g~v~~v~~~~~~~~~~l~~~~~v~~v~~ 156 (414)
+|+|||||+...++++++||++||+||+|||+.+|.++..+.+++.++|+|+|+++++++++.+.++.|+.||+|+.|.|
T Consensus 153 ~I~PwN~P~~~~~~~i~~ALaaGN~VVlKPs~~tp~~~~~l~~~~~~aglP~gv~~~v~g~~~~~~~~L~~~~~v~~v~f 232 (486)
T cd07140 153 IVIPWNYPLMMLAWKMAACLAAGNTVVLKPAQVTPLTALKFAELTVKAGFPKGVINILPGSGSLVGQRLSDHPDVRKLGF 232 (486)
T ss_pred EEcCCchHHHHHHHHHHHHHHhCCEEEEECCccCcHHHHHHHHHHHHcCcCCCcEEEEecCchHHHHHHhcCCCCCEEEE
Confidence 99999999999999999999999999999999999999999999999999999999999977788999999999999999
Q ss_pred eCCcHHHHHHHHHHHhcccceeEEEcCCCCCceEcCCCCHHHHHHHHHHHhhccCCCCcccCceEEEeCchHHHHHHHHH
Q 015042 157 TGSTDVGRLVMQAAAASNLKQVSLELGGKSPLLIFDDADLDTAADVALLGNLYNKGEICVASSRVFVQEGIYDKFEKKLL 236 (414)
Q Consensus 157 tGs~~~g~~i~~~~a~~~~~~~~~e~gg~~~~iV~~dadl~~aa~~i~~~~~~~~Gq~C~a~~~i~V~~~i~d~f~~~l~ 236 (414)
|||+.+|+.|++.++.++++|+++|+|||||+||++|||++.|++.+++++|.|+||.|+++++||||+++||+|+++|+
T Consensus 233 tGs~~~g~~i~~~aa~~~l~~v~lElGGk~~~iV~~dadl~~a~~~i~~~~~~~~GQ~C~a~~rl~V~~~i~~~f~~~l~ 312 (486)
T cd07140 233 TGSTPIGKHIMKSCAVSNLKKVSLELGGKSPLIIFADCDMDKAVRMGMSSVFFNKGENCIAAGRLFVEESIHDEFVRRVV 312 (486)
T ss_pred ECcHHHHHHHHHHHHhcCCCeEEEEcCCCCceEECCCCCHHHHHHHHHHHHHhccCCCCCCCcEEEEcHHHHHHHHHHHH
Confidence 99999999999998733889999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhhcccCCCCCCCCcccccCCHHHHHHHHHHHHHHHHcCCEEEeCCcccCCCCceeeeEEEeeCCCcccccccceecc
Q 015042 237 EKAKAWLVGDPFDPTVRQGPQISERHFDRILSYIEHGKREGATLLTGGKPIGDKGYYIEPTIFTNVKEDMIIAKEEIFGP 316 (414)
Q Consensus 237 ~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgP 316 (414)
++++++++|+|.++++++||+++..++++++++|++++++|+++++||...+..|+|++|||+.+++++|.+++||+|||
T Consensus 313 ~~~~~l~~g~p~~~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~vl~gg~~~~~~g~~~~Ptvl~~~~~~~~i~~eE~FGP 392 (486)
T cd07140 313 EEVKKMKIGDPLDRSTDHGPQNHKAHLDKLVEYCERGVKEGATLVYGGKQVDRPGFFFEPTVFTDVEDHMFIAKEESFGP 392 (486)
T ss_pred HHHHhCCccCCCCCCCcCCCCcCHHHHHHHHHHHHHHHHCCCEEEeCCCCCCCCCeeECCEEEeCCCCCChhhhCCCCCC
Confidence 99999999999999999999999999999999999999999999999976545789999999999999999999999999
Q ss_pred eEEEEeeC--CHHHHHHHhhcCCCCceEEEecCCHHHHHHHHHhcceeEEEEcCcCCCCCCCCcccCCCCCCCccchHHH
Q 015042 317 VMALMKFK--TVEEAIKSANNTQYGLAAGIVTKDLNVANTVSRSIRAGIIWINCYFGFSMDCPYGGYKMSGFGREYGLES 394 (414)
Q Consensus 317 vl~v~~~~--~~~eai~~~n~~~~gl~~sv~s~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~p~gG~~~sG~g~~~g~~~ 394 (414)
|++|++|+ |++|||+++|+++|||++||||+|.+.++++++++++|.|+||++....+.+||||+|.||+|+++|++|
T Consensus 393 vl~v~~~~~~~~~eai~~aN~~~~gL~a~vft~d~~~a~~~~~~l~~G~v~iN~~~~~~~~~PfGG~k~SG~G~~~G~~~ 472 (486)
T cd07140 393 IMIISKFDDGDVDGVLQRANDTEYGLASGVFTKDINKALYVSDKLEAGTVFVNTYNKTDVAAPFGGFKQSGFGKDLGEEA 472 (486)
T ss_pred eEEEEEcCCCCHHHHHHHHhCCCcCceEEEECCCHHHHHHHHHhCCcceEEECCCCCCCCCCCcCCcccCcCCCcchHHH
Confidence 99999998 6999999999999999999999999999999999999999999987777789999999999999999999
Q ss_pred HHhhheeeEEEee
Q 015042 395 LYKYLQIKSVVTP 407 (414)
Q Consensus 395 ~~~~~~~k~i~~~ 407 (414)
+++||++|+|+++
T Consensus 473 l~~ft~~k~v~~~ 485 (486)
T cd07140 473 LNEYLKTKTVTIE 485 (486)
T ss_pred HHHhhcEEEEEEe
Confidence 9999999999764
|
10-formyltetrahydrofolate dehydrogenase (FTHFDH, EC=1.5.1.6), also known as aldehyde dehydrogenase family 1 member L1 (ALDH1L1) in humans, is a multi-domain homotetramer with an N-terminal formyl transferase domain and a C-terminal ALDH domain. FTHFDH catalyzes an NADP+-dependent dehydrogenase reaction resulting in the conversion of 10-formyltetrahydrofolate to tetrahydrofolate and CO2. The ALDH domain is also capable of the oxidation of short chain aldehydes to their corresponding acids. |
| >KOG2451 consensus Aldehyde dehydrogenase [Energy production and conversion] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-90 Score=640.06 Aligned_cols=405 Identities=40% Similarity=0.684 Sum_probs=388.7
Q ss_pred CHHHHHHHHHhHHHHHHHHHHhcCCChHHHhhchHHHHHHHHHHHHHhhhhhcCcccccC-CCcccceeecCCceEEEEc
Q 015042 1 MWKFADLIEEHVEELAALDALDAGKVYLRAKTAEIPGAAEFLRFFAGAADKIHGEVLKMS-SELQGYTLREPVGVVGHII 79 (414)
Q Consensus 1 L~~~a~~l~~~~~~l~~~~~~etGk~~~e~~~~ei~~~~~~l~~~a~~~~~~~~~~~~~~-~~~~~~~~~~P~Gvv~~i~ 79 (414)
|+++.++|.+|.++|++++++|.|||+.|+ ..||.-+..+++||++.+.+.+|..++.. ...+..+.+||+||+++|+
T Consensus 89 Lrkwy~Li~en~ddLa~iiTlE~GKpL~eA-~gEv~y~a~f~eWyAeEA~RvyGdii~s~~~~rr~i~ikQPvGV~alIt 167 (503)
T KOG2451|consen 89 LRKWYELIMENKDDLATIITLENGKPLGEA-KGEVAYSAAFFEWYAEEARRVYGDIIPSLNPNRRLIVIKQPVGVVALIT 167 (503)
T ss_pred HHHHHHHHHhchHHHHHHHhhhcCCchhhc-cceeehhHHHHHHHHHHhhhhhccccCCCCCCceEEEEeccceeEEEec
Confidence 688999999999999999999999999984 68999999999999999999999887654 5677889999999999999
Q ss_pred CCccchHHHHHhHHHHHhhCCeEEeecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCC---chhhHHHhhhCCCccEEEE
Q 015042 80 PWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLTALYYAHLAKLAGIPDGVLNVVPGF---GPTAGAAICSHMDIDYVCF 156 (414)
Q Consensus 80 p~n~P~~~~~~~~~~aLaaGN~vv~kps~~~~~~~~~l~~~l~~aG~p~g~v~~v~~~---~~~~~~~l~~~~~v~~v~~ 156 (414)
|||||.....++..+||++||+||+||+..+|+++..++++..+||+|+|++|++.++ ..+.++.|+.+|.|+.|.|
T Consensus 168 PWNFP~AMItRK~gAALAaGCTvVvkPs~~TPlsaLala~lA~~AGiP~Gv~NVit~~~~~a~eig~~lctsp~VrkisF 247 (503)
T KOG2451|consen 168 PWNFPAAMITRKAGAALAAGCTVVVKPSEDTPLSALALAKLAEEAGIPAGVLNVITADASNAAEIGKELCTSPDVRKISF 247 (503)
T ss_pred CcCChHHHHHhHHHHHHhcCceEEEccCCCCchHHHHHHHHHHHcCCCCcceEEEecCCCChHHHHHHhhcCCceeeEEe
Confidence 9999999999999999999999999999999999999999999999999999999863 4578999999999999999
Q ss_pred eCCcHHHHHHHHHHHhcccceeEEEcCCCCCceEcCCCCHHHHHHHHHHHhhccCCCCcccCceEEEeCchHHHHHHHHH
Q 015042 157 TGSTDVGRLVMQAAAASNLKQVSLELGGKSPLLIFDDADLDTAADVALLGNLYNKGEICVASSRVFVQEGIYDKFEKKLL 236 (414)
Q Consensus 157 tGs~~~g~~i~~~~a~~~~~~~~~e~gg~~~~iV~~dadl~~aa~~i~~~~~~~~Gq~C~a~~~i~V~~~i~d~f~~~l~ 236 (414)
|||+.+|+.++.+++ ...|++.+||||+.|.||.+|||+|.|++..+..+|.++||.|.+++|+|||+++||+|+.+|.
T Consensus 248 TGST~VGKiL~~qsa-stvKkvslELGGNAPfIVFddadld~Av~g~mA~KFr~~GQtCVcaNR~yVh~~iyD~Fv~~l~ 326 (503)
T KOG2451|consen 248 TGSTNVGKILMAQSA-STVKKVSLELGGNAPFIVFDDADLDQAVEGAMACKFRNSGQTCVCANRVYVHDSIYDKFVSKLA 326 (503)
T ss_pred eccchHHHHHHHhhh-hhhhheehhhcCCCceEEecCcCHHHHHHHHHHhhhccCCceeEecceeEEehhhHHHHHHHHH
Confidence 999999999999998 8999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhhcccCCCCCCCCcccccCCHHHHHHHHHHHHHHHHcCCEEEeCCcccC-CCCceeeeEEEeeCCCcccccccceec
Q 015042 237 EKAKAWLVGDPFDPTVRQGPQISERHFDRILSYIEHGKREGATLLTGGKPIG-DKGYYIEPTIFTNVKEDMIIAKEEIFG 315 (414)
Q Consensus 237 ~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~-~~g~~~~Ptvl~~~~~~~~~~~~E~fg 315 (414)
++++++++||.+++++..||+|+..+.+++++.+++|+.+|+++++||+... ..++|++|||+.+++++|-+.+||+||
T Consensus 327 e~vkkl~vGdG~~~~tt~GpLIne~av~Kve~~v~DAvsKga~ii~GGk~~~~lg~~fyePTvl~~V~~~m~~s~eEtFG 406 (503)
T KOG2451|consen 327 EAVKKLKVGDGLDPGTTQGPLINEKAVEKVEKHVEDAVSKGAKIILGGKERSELGPTFYEPTVLSNVTQNMLVSSEETFG 406 (503)
T ss_pred HHHHheeccCCCCCCCccCCccCHHHHHHHHHHHHHHHhcCCeEEeCCeEccccCCccccceEeecCCccceeecccccc
Confidence 9999999999999999999999999999999999999999999999999554 455999999999999999999999999
Q ss_pred ceEEEEeeCCHHHHHHHhhcCCCCceEEEecCCHHHHHHHHHhcceeEEEEcCcCCCCCCCCcccCCCCCCCccchHHHH
Q 015042 316 PVMALMKFKTVEEAIKSANNTQYGLAAGIVTKDLNVANTVSRSIRAGIIWINCYFGFSMDCPYGGYKMSGFGREYGLESL 395 (414)
Q Consensus 316 Pvl~v~~~~~~~eai~~~n~~~~gl~~sv~s~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~p~gG~~~sG~g~~~g~~~~ 395 (414)
|+.+|++|+|.||+|+++|+++.||++|+||+|.++..+++++|++|.|-+|.........||||.|+||+||+++++|+
T Consensus 407 Pla~v~kFdteeEvi~~ANdt~vGLAgYvfs~~~s~~~rVae~LEvGmVGvNeglis~~~~pFGGVKeSG~GREgskyGi 486 (503)
T KOG2451|consen 407 PLASVFKFDTEEEVIEWANDTRVGLAGYVFSNNLSRLFRVAEALEVGMVGVNEGLISDAEAPFGGVKESGFGREGSKYGI 486 (503)
T ss_pred ccceeeeeCCHHHHHHHhccCccceeeEEeccCHHHHHHHHHHHhcceeecccceecccccCcCCccccccCccccccch
Confidence 99999999999999999999999999999999999999999999999999999888888999999999999999999999
Q ss_pred HhhheeeEEEee
Q 015042 396 YKYLQIKSVVTP 407 (414)
Q Consensus 396 ~~~~~~k~i~~~ 407 (414)
++|+..|.|.+.
T Consensus 487 dey~~ik~icig 498 (503)
T KOG2451|consen 487 DEYLVIKYICIG 498 (503)
T ss_pred hhhhhhheeeec
Confidence 999999988654
|
|
| >cd07113 ALDH_PADH_NahF Escherichia coli NAD+-dependent phenylacetaldehyde dehydrogenase PadA-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.4e-89 Score=696.18 Aligned_cols=405 Identities=41% Similarity=0.714 Sum_probs=380.9
Q ss_pred CHHHHHHHHHhHHHHHHHHHHhcCCChHHHhhchHHHHHHHHHHHHHhhhhhcCcccccC------CCcccceeecCCce
Q 015042 1 MWKFADLIEEHVEELAALDALDAGKVYLRAKTAEIPGAAEFLRFFAGAADKIHGEVLKMS------SELQGYTLREPVGV 74 (414)
Q Consensus 1 L~~~a~~l~~~~~~l~~~~~~etGk~~~e~~~~ei~~~~~~l~~~a~~~~~~~~~~~~~~------~~~~~~~~~~P~Gv 74 (414)
|+++++.|++++++|++++++|+|||..++...|+..+++.+++++.+..+..+...+.. .+...+.+++|+||
T Consensus 66 L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GV 145 (477)
T cd07113 66 LLRLADLIEQHGEELAQLETLCSGKSIHLSRAFEVGQSANFLRYFAGWATKINGETLAPSIPSMQGERYTAFTRREPVGV 145 (477)
T ss_pred HHHHHHHHHHCHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCcccccccccccCCCceEEEEEeecce
Confidence 578999999999999999999999999976546999999999999988776555433211 12346789999999
Q ss_pred EEEEcCCccchHHHHHhHHHHHhhCCeEEeecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhhHHHhhhCCCccEE
Q 015042 75 VGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLTALYYAHLAKLAGIPDGVLNVVPGFGPTAGAAICSHMDIDYV 154 (414)
Q Consensus 75 v~~i~p~n~P~~~~~~~~~~aLaaGN~vv~kps~~~~~~~~~l~~~l~~aG~p~g~v~~v~~~~~~~~~~l~~~~~v~~v 154 (414)
|++|+|||||+...++++++||++||+||+|||+.+|.++..+.+++.++|+|+|++|++++++. .++.|+.||++|+|
T Consensus 146 v~~I~p~N~P~~~~~~~i~~ALaaGN~VvlKPs~~tp~~~~~l~~~~~~aglP~gvv~~v~g~~~-~~~~L~~~~~v~~V 224 (477)
T cd07113 146 VAGIVPWNFSVMIAVWKIGAALATGCTIVIKPSEFTPLTLLRVAELAKEAGIPDGVLNVVNGKGA-VGAQLISHPDVAKV 224 (477)
T ss_pred EEEEcCCChHHHHHHHHHHHHHHcCCEEEEECCCCCcHHHHHHHHHHHHcCcCCCcEEEEecCch-HHHHHhcCCCCCEE
Confidence 99999999999999999999999999999999999999999999999999999999999998665 88999999999999
Q ss_pred EEeCCcHHHHHHHHHHHhcccceeEEEcCCCCCceEcCCCCHHHHHHHHHHHhhccCCCCcccCceEEEeCchHHHHHHH
Q 015042 155 CFTGSTDVGRLVMQAAAASNLKQVSLELGGKSPLLIFDDADLDTAADVALLGNLYNKGEICVASSRVFVQEGIYDKFEKK 234 (414)
Q Consensus 155 ~~tGs~~~g~~i~~~~a~~~~~~~~~e~gg~~~~iV~~dadl~~aa~~i~~~~~~~~Gq~C~a~~~i~V~~~i~d~f~~~ 234 (414)
.||||+.+|+.|.+.++ .+++|+++|+|||||+||++|||++.|++.+++++|.|+||.|+++++||||+++||+|+++
T Consensus 225 ~fTGS~~~G~~i~~~aa-~~~~~~~lElGGkn~~iV~~dAdl~~aa~~i~~~~f~~~GQ~C~a~~rv~V~~~i~d~f~~~ 303 (477)
T cd07113 225 SFTGSVATGKKIGRQAA-SDLTRVTLELGGKNAAAFLKDADIDWVVEGLLTAGFLHQGQVCAAPERFYVHRSKFDELVTK 303 (477)
T ss_pred EEECcHHHHHHHHHHHH-hhcCceEeecCCCCeeEECCCCCHHHHHHHHHHHHHhhCCCCCcCCcEEEECHHHHHHHHHH
Confidence 99999999999999988 78999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhhcccCCCCCCCCcccccCCHHHHHHHHHHHHHHHHcCCEEEeCCcccCCCCceeeeEEEeeCCCccccccccee
Q 015042 235 LLEKAKAWLVGDPFDPTVRQGPQISERHFDRILSYIEHGKREGATLLTGGKPIGDKGYYIEPTIFTNVKEDMIIAKEEIF 314 (414)
Q Consensus 235 l~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~f 314 (414)
|+++++++++|+|.++++++||++++.+++++.+++++++++|+++++||....+.|+|+.|||+.+++++|.+++||+|
T Consensus 304 l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~~~~~i~~a~~~Ga~~l~gg~~~~~~g~~~~Ptvl~~v~~~~~~~~eE~F 383 (477)
T cd07113 304 LKQALSSFQVGSPMDESVMFGPLANQPHFDKVCSYLDDARAEGDEIVRGGEALAGEGYFVQPTLVLARSADSRLMREETF 383 (477)
T ss_pred HHHHHHhCCCCCCCCCCCCCCCCcCHHHHHHHHHHHHHHHHCCCEEEeCCCCCCCCCeeEeCEEEecCCCCChHHhCCCC
Confidence 99999999999999999999999999999999999999999999999999765446899999999999999999999999
Q ss_pred cceEEEEeeCCHHHHHHHhhcCCCCceEEEecCCHHHHHHHHHhcceeEEEEcCcCCCCCCCCcccCCCCCCCccchHHH
Q 015042 315 GPVMALMKFKTVEEAIKSANNTQYGLAAGIVTKDLNVANTVSRSIRAGIIWINCYFGFSMDCPYGGYKMSGFGREYGLES 394 (414)
Q Consensus 315 gPvl~v~~~~~~~eai~~~n~~~~gl~~sv~s~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~p~gG~~~sG~g~~~g~~~ 394 (414)
|||++|++|+|+||||+++|+++|||++||||+|.++++++++++++|+|+||++....+.+||||+|.||+|+++|.++
T Consensus 384 gPvl~v~~~~~~deai~~~n~~~~gL~a~v~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~PfGG~k~SG~G~~~g~~~ 463 (477)
T cd07113 384 GPVVSFVPYEDEEELIQLINDTPFGLTASVWTNNLSKALRYIPRIEAGTVWVNMHTFLDPAVPFGGMKQSGIGREFGSAF 463 (477)
T ss_pred CCeEEEEEeCCHHHHHHHHhCCCCCceEEEECCCHHHHHHHHHhCCcceEEECCCCCCCCCCCCCCCccccCCccchHHH
Confidence 99999999999999999999999999999999999999999999999999999887777889999999999999999999
Q ss_pred HHhhheeeEEEee
Q 015042 395 LYKYLQIKSVVTP 407 (414)
Q Consensus 395 ~~~~~~~k~i~~~ 407 (414)
+++||++|+|+.+
T Consensus 464 l~~~t~~k~v~~~ 476 (477)
T cd07113 464 IDDYTELKSVMIR 476 (477)
T ss_pred HHHhhceEEEEEe
Confidence 9999999999764
|
NAD+-dependent, homodimeric, phenylacetaldehyde dehydrogenase (PADH, EC=1.2.1.39) PadA of Escherichia coli involved in the catabolism of 2-phenylethylamine, and other related sequences, are present in this CD. Also included is the Pseudomonas fluorescens ST StyD PADH involved in styrene catabolism, the Sphingomonas sp. LB126 FldD protein involved in fluorene degradation, and the Novosphingobium aromaticivorans NahF salicylaldehyde dehydrogenase involved in the NAD+-dependent conversion of salicylaldehyde to salicylate. |
| >cd07142 ALDH_F2BC Arabidosis aldehyde dehydrogenase family 2 B4, B7, C4-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.8e-89 Score=695.49 Aligned_cols=405 Identities=59% Similarity=1.015 Sum_probs=382.9
Q ss_pred CHHHHHHHHHhHHHHHHHHHHhcCCChHHHhhchHHHHHHHHHHHHHhhhhhcCcccccCCCcccceeecCCceEEEEcC
Q 015042 1 MWKFADLIEEHVEELAALDALDAGKVYLRAKTAEIPGAAEFLRFFAGAADKIHGEVLKMSSELQGYTLREPVGVVGHIIP 80 (414)
Q Consensus 1 L~~~a~~l~~~~~~l~~~~~~etGk~~~e~~~~ei~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p 80 (414)
|+++++.|++|+++|++++++|+|||..++...|+..+++.+++++.+.++..+...+...+...+.+++|+|||++|+|
T Consensus 71 L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~a~~~~~~~g~~~~~~~~~~~~~~~~P~GVv~~I~p 150 (476)
T cd07142 71 LLRFADLLEKHADELAALETWDNGKPYEQARYAEVPLAARLFRYYAGWADKIHGMTLPADGPHHVYTLHEPIGVVGQIIP 150 (476)
T ss_pred HHHHHHHHHHhHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCcccccCCCceEEEEEeceeeEEEECC
Confidence 57899999999999999999999999997666699999999999999887765554443223456788999999999999
Q ss_pred CccchHHHHHhHHHHHhhCCeEEeecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhhHHHhhhCCCccEEEEeCCc
Q 015042 81 WNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLTALYYAHLAKLAGIPDGVLNVVPGFGPTAGAAICSHMDIDYVCFTGST 160 (414)
Q Consensus 81 ~n~P~~~~~~~~~~aLaaGN~vv~kps~~~~~~~~~l~~~l~~aG~p~g~v~~v~~~~~~~~~~l~~~~~v~~v~~tGs~ 160 (414)
||||+...++++++||++||+||+|||+.+|.++..+++++.++|+|+|+++++++++.+.++.|..||++|.|.||||+
T Consensus 151 wN~P~~~~~~~i~~ALaaGN~VV~KPs~~tp~~~~~l~~~~~~aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~v~fTGs~ 230 (476)
T cd07142 151 WNFPLLMFAWKVGPALACGNTIVLKPAEQTPLSALLAAKLAAEAGLPDGVLNIVTGFGPTAGAAIASHMDVDKVAFTGST 230 (476)
T ss_pred CccHHHHHHHHHHHHHHcCCEEEEECCCcccHHHHHHHHHHHHcCcCcccEEEEeCCchhHHHHHhcCCCCCEEEEECcH
Confidence 99999999999999999999999999999999999999999999999999999999777789999999999999999999
Q ss_pred HHHHHHHHHHHhcccceeEEEcCCCCCceEcCCCCHHHHHHHHHHHhhccCCCCcccCceEEEeCchHHHHHHHHHHHHh
Q 015042 161 DVGRLVMQAAAASNLKQVSLELGGKSPLLIFDDADLDTAADVALLGNLYNKGEICVASSRVFVQEGIYDKFEKKLLEKAK 240 (414)
Q Consensus 161 ~~g~~i~~~~a~~~~~~~~~e~gg~~~~iV~~dadl~~aa~~i~~~~~~~~Gq~C~a~~~i~V~~~i~d~f~~~l~~~~~ 240 (414)
.+|+.|.+.++.++++|+++|+|||||+||++|||++.|++.+++++|.|+||.|+++++||||+++||+|+++|++++.
T Consensus 231 ~~G~~v~~~aa~~~~~~v~lElgGk~p~iV~~dADl~~Aa~~i~~~~f~~aGQ~C~a~~rv~V~~~i~d~f~~~l~~~~~ 310 (476)
T cd07142 231 EVGKIIMQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAVELAHFALFFNQGQCCCAGSRTFVHESIYDEFVEKAKARAL 310 (476)
T ss_pred HHHHHHHHHHHHcCCCeEEEECCCCCeeEECCCCCHHHHHHHHHHHHhcCCCCCCCCCeeEEEeHHHHHHHHHHHHHHHH
Confidence 99999999987238899999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hcccCCCCCCCCcccccCCHHHHHHHHHHHHHHHHcCCEEEeCCcccCCCCceeeeEEEeeCCCcccccccceecceEEE
Q 015042 241 AWLVGDPFDPTVRQGPQISERHFDRILSYIEHGKREGATLLTGGKPIGDKGYYIEPTIFTNVKEDMIIAKEEIFGPVMAL 320 (414)
Q Consensus 241 ~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v 320 (414)
++++|+|.++++++||+++..+++++++++++++++|+++++||.....+|+|+.|||+.++++++.+++||+||||++|
T Consensus 311 ~~~~G~p~~~~~~~Gpli~~~~~~~v~~~v~~a~~~Ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~i~~eE~FgPvl~v 390 (476)
T cd07142 311 KRVVGDPFRKGVEQGPQVDKEQFEKILSYIEHGKEEGATLITGGDRIGSKGYYIQPTIFSDVKDDMKIARDEIFGPVQSI 390 (476)
T ss_pred hcCCCCCCCCCCcCCcCcCHHHHHHHHHHHHHHHhCCCEEEecCCcCCCCCeeEccEEeecCCCCChhhhCCccCceEEE
Confidence 99999999999999999999999999999999999999999999875557899999999999999999999999999999
Q ss_pred EeeCCHHHHHHHhhcCCCCceEEEecCCHHHHHHHHHhcceeEEEEcCcCCCCCCCCcccCCCCCCCccchHHHHHhhhe
Q 015042 321 MKFKTVEEAIKSANNTQYGLAAGIVTKDLNVANTVSRSIRAGIIWINCYFGFSMDCPYGGYKMSGFGREYGLESLYKYLQ 400 (414)
Q Consensus 321 ~~~~~~~eai~~~n~~~~gl~~sv~s~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~p~gG~~~sG~g~~~g~~~~~~~~~ 400 (414)
++|+|++|||+++|++++||++||||+|.+.++++++++++|+|+||++....+.+||||+|.||+|+++|++|+++||+
T Consensus 391 ~~~~~~~eai~~~n~~~~gL~a~vft~d~~~a~~~~~~l~~G~v~iN~~~~~~~~~PfGG~k~SG~G~~~g~~~~~~ft~ 470 (476)
T cd07142 391 LKFKTVDEVIKRANNSKYGLAAGVFSKNIDTANTLSRALKAGTVWVNCYDVFDASIPFGGYKMSGIGREKGIYALNNYLQ 470 (476)
T ss_pred EeeCCHHHHHHHHhCCCCCceEEEECCCHHHHHHHHHhCCcceEEECCCCCCCCCCCCCCCccCcCCccchHHHHHHhhh
Confidence 99999999999999999999999999999999999999999999999988777889999999999999999999999999
Q ss_pred eeEEE
Q 015042 401 IKSVV 405 (414)
Q Consensus 401 ~k~i~ 405 (414)
+|+|+
T Consensus 471 ~k~v~ 475 (476)
T cd07142 471 VKAVV 475 (476)
T ss_pred eeEEe
Confidence 99985
|
Included in this CD is the Arabidosis aldehyde dehydrogenase family 2 members B4 and B7 (EC=1.2.1.3), which are mitochondrial homotetramers that oxidize acetaldehyde and glycolaldehyde, but not L-lactaldehyde. Also in this group, is the Arabidosis cytosolic, homotetramer ALDH2C4 (EC=1.2.1.3), an enzyme involved in the oxidation of sinapalehyde and coniferaldehyde. |
| >PLN02278 succinic semialdehyde dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.1e-89 Score=694.55 Aligned_cols=405 Identities=45% Similarity=0.706 Sum_probs=382.1
Q ss_pred CHHHHHHHHHhHHHHHHHHHHhcCCChHHHhhchHHHHHHHHHHHHHhhhhhcCcccccC-CCcccceeecCCceEEEEc
Q 015042 1 MWKFADLIEEHVEELAALDALDAGKVYLRAKTAEIPGAAEFLRFFAGAADKIHGEVLKMS-SELQGYTLREPVGVVGHII 79 (414)
Q Consensus 1 L~~~a~~l~~~~~~l~~~~~~etGk~~~e~~~~ei~~~~~~l~~~a~~~~~~~~~~~~~~-~~~~~~~~~~P~Gvv~~i~ 79 (414)
|+++++.|++|+++|++++++|+|||..++. .|+..+++.+++++....+..+...+.. .+...+.+++|+|||++|+
T Consensus 90 L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~-~Ev~~~i~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~P~GvV~~I~ 168 (498)
T PLN02278 90 LRRWYDLIIANKEDLAQLMTLEQGKPLKEAI-GEVAYGASFLEYFAEEAKRVYGDIIPSPFPDRRLLVLKQPVGVVGAIT 168 (498)
T ss_pred HHHHHHHHHHhHHHHHHHHHHHcCCCHHHHH-HHHHHHHHHHHHHHHHHHHhcCcccccCCCCceEEEEeecccEEEEEC
Confidence 5789999999999999999999999999864 6999999999999998876655443332 2345678899999999999
Q ss_pred CCccchHHHHHhHHHHHhhCCeEEeecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhhHHHhhhCCCccEEEEeCC
Q 015042 80 PWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLTALYYAHLAKLAGIPDGVLNVVPGFGPTAGAAICSHMDIDYVCFTGS 159 (414)
Q Consensus 80 p~n~P~~~~~~~~~~aLaaGN~vv~kps~~~~~~~~~l~~~l~~aG~p~g~v~~v~~~~~~~~~~l~~~~~v~~v~~tGs 159 (414)
|||||+...++++++||++||+||+|||+.+|.++..+.++|.++|+|+|+++++++++.+.++.|+.||+||+|.||||
T Consensus 169 PwN~P~~~~~~~i~~ALaaGN~VVlKps~~tp~~~~~l~~~l~eaglP~gvv~~v~g~~~~~~~~L~~~~~v~~V~fTGS 248 (498)
T PLN02278 169 PWNFPLAMITRKVGPALAAGCTVVVKPSELTPLTALAAAELALQAGIPPGVLNVVMGDAPEIGDALLASPKVRKITFTGS 248 (498)
T ss_pred CCccHHHHHHHHHHHHHHcCCEEEEECCCCChHHHHHHHHHHHHcCCCcccEEEEecCChhhHHHHhcCCCcCEEEEECc
Confidence 99999999999999999999999999999999999999999999999999999999977678899999999999999999
Q ss_pred cHHHHHHHHHHHhcccceeEEEcCCCCCceEcCCCCHHHHHHHHHHHhhccCCCCcccCceEEEeCchHHHHHHHHHHHH
Q 015042 160 TDVGRLVMQAAAASNLKQVSLELGGKSPLLIFDDADLDTAADVALLGNLYNKGEICVASSRVFVQEGIYDKFEKKLLEKA 239 (414)
Q Consensus 160 ~~~g~~i~~~~a~~~~~~~~~e~gg~~~~iV~~dadl~~aa~~i~~~~~~~~Gq~C~a~~~i~V~~~i~d~f~~~l~~~~ 239 (414)
+.+|+.|++.++ ++++|+++|+|||||+||++|||++.|++.+++++|.|+||.|+++++||||+++||+|+++|++++
T Consensus 249 ~~~G~~i~~~aa-~~~~~~~lElGGk~~~iV~~dAdl~~aa~~i~~~~f~~~GQ~C~a~~rv~V~~~i~~~f~~~L~~~~ 327 (498)
T PLN02278 249 TAVGKKLMAGAA-ATVKRVSLELGGNAPFIVFDDADLDVAVKGALASKFRNSGQTCVCANRILVQEGIYDKFAEAFSKAV 327 (498)
T ss_pred HHHHHHHHHHHh-hcCCcEEEecCCCCeeEECCCCCHHHHHHHHHHHHhccCCCCCcCCcEEEEeHHHHHHHHHHHHHHH
Confidence 999999999988 8899999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhcccCCCCCCCCcccccCCHHHHHHHHHHHHHHHHcCCEEEeCCcccCCCCceeeeEEEeeCCCcccccccceecceEE
Q 015042 240 KAWLVGDPFDPTVRQGPQISERHFDRILSYIEHGKREGATLLTGGKPIGDKGYYIEPTIFTNVKEDMIIAKEEIFGPVMA 319 (414)
Q Consensus 240 ~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~ 319 (414)
+++++|+|.++++++||++++.+++++++++++++++|+++++||.....+|+|++|||+.+++++|+++++|+||||++
T Consensus 328 ~~l~~G~p~~~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~vl~gG~~~~~~g~~~~Ptvl~~v~~~~~~~~~E~FGPVl~ 407 (498)
T PLN02278 328 QKLVVGDGFEEGVTQGPLINEAAVQKVESHVQDAVSKGAKVLLGGKRHSLGGTFYEPTVLGDVTEDMLIFREEVFGPVAP 407 (498)
T ss_pred HhcCCCCCCCCCCcCCCccCHHHHHHHHHHHHHHHhCCCEEEeCCccCCCCCceEeeEEEecCCCCChhhhCCCcCCEEE
Confidence 99999999999999999999999999999999999999999999976544689999999999999999999999999999
Q ss_pred EEeeCCHHHHHHHhhcCCCCceEEEecCCHHHHHHHHHhcceeEEEEcCcCCCCCCCCcccCCCCCCCccchHHHHHhhh
Q 015042 320 LMKFKTVEEAIKSANNTQYGLAAGIVTKDLNVANTVSRSIRAGIIWINCYFGFSMDCPYGGYKMSGFGREYGLESLYKYL 399 (414)
Q Consensus 320 v~~~~~~~eai~~~n~~~~gl~~sv~s~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~p~gG~~~sG~g~~~g~~~~~~~~ 399 (414)
|++|+|+||||+++|+++|||++||||+|.+.++++++++++|.|+||+.....+.+||||+|.||+|+++|++|+++||
T Consensus 408 v~~~~~~deai~~~N~~~~gL~a~vft~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~PfGG~k~SG~G~~~G~~~l~~ft 487 (498)
T PLN02278 408 LTRFKTEEEAIAIANDTEAGLAAYIFTRDLQRAWRVSEALEYGIVGVNEGLISTEVAPFGGVKQSGLGREGSKYGIDEYL 487 (498)
T ss_pred EEeeCCHHHHHHHHhCCCCCceEEEEcCCHHHHHHHHHhCCcCeEEECCCCCCCCCCCcCCcccCcCCccchHHHHHHhh
Confidence 99999999999999999999999999999999999999999999999997766677999999999999999999999999
Q ss_pred eeeEEEee
Q 015042 400 QIKSVVTP 407 (414)
Q Consensus 400 ~~k~i~~~ 407 (414)
++|+|+++
T Consensus 488 ~~k~i~~~ 495 (498)
T PLN02278 488 EIKYVCLG 495 (498)
T ss_pred eeEEEEEe
Confidence 99999764
|
|
| >PRK13968 putative succinate semialdehyde dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.7e-89 Score=689.26 Aligned_cols=404 Identities=31% Similarity=0.486 Sum_probs=377.8
Q ss_pred CHHHHHHHHHhHHHHHHHHHHhcCCChHHHhhchHHHHHHHHHHHHHhhhhhcCcccccCCCcccceeecCCceEEEEcC
Q 015042 1 MWKFADLIEEHVEELAALDALDAGKVYLRAKTAEIPGAAEFLRFFAGAADKIHGEVLKMSSELQGYTLREPVGVVGHIIP 80 (414)
Q Consensus 1 L~~~a~~l~~~~~~l~~~~~~etGk~~~e~~~~ei~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p 80 (414)
|+++++.|++|+++|++++++|+|||..++. .|+..+++.+++++....+..+.......+...+++++|+|||++|+|
T Consensus 57 L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a~-~ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GvV~~I~P 135 (462)
T PRK13968 57 LRDIGKALRARSEEMAQMITREMGKPINQAR-AEVAKSANLCDWYAEHGPAMLKAEPTLVENQQAVIEYRPLGTILAIMP 135 (462)
T ss_pred HHHHHHHHHhHHHHHHHHHHHHhCCCHHHHH-HHHHHHHHHHHHHHHHHHHhhCCccccCCCceEEEEEeccceEEEEcC
Confidence 5789999999999999999999999998764 699999999999998776553322111234456889999999999999
Q ss_pred CccchHHHHHhHHHHHhhCCeEEeecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhhHHHhhhCCCccEEEEeCCc
Q 015042 81 WNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLTALYYAHLAKLAGIPDGVLNVVPGFGPTAGAAICSHMDIDYVCFTGST 160 (414)
Q Consensus 81 ~n~P~~~~~~~~~~aLaaGN~vv~kps~~~~~~~~~l~~~l~~aG~p~g~v~~v~~~~~~~~~~l~~~~~v~~v~~tGs~ 160 (414)
||||++..++++++||++||+||+|||+.+|.++..+.+++.++|+|+|+++++++++.. ...++.||++|.|.||||.
T Consensus 136 wN~P~~~~~~~~~~ALaaGN~vv~KPs~~tp~~~~~l~~~~~~aGlP~gv~~~v~g~~~~-~~~l~~~~~v~~V~fTGs~ 214 (462)
T PRK13968 136 WNFPLWQVMRGAVPILLAGNGYLLKHAPNVMGCAQLIAQVFKDAGIPQGVYGWLNADNDG-VSQMINDSRIAAVTVTGSV 214 (462)
T ss_pred CchHHHHHHHHHHHHHHcCCEEEEECCCcChHHHHHHHHHHHHcCcCcCcEEEEecCchh-hHHHhcCCCCCEEEEECCH
Confidence 999999999999999999999999999999999999999999999999999999985544 4558899999999999999
Q ss_pred HHHHHHHHHHHhcccceeEEEcCCCCCceEcCCCCHHHHHHHHHHHhhccCCCCcccCceEEEeCchHHHHHHHHHHHHh
Q 015042 161 DVGRLVMQAAAASNLKQVSLELGGKSPLLIFDDADLDTAADVALLGNLYNKGEICVASSRVFVQEGIYDKFEKKLLEKAK 240 (414)
Q Consensus 161 ~~g~~i~~~~a~~~~~~~~~e~gg~~~~iV~~dadl~~aa~~i~~~~~~~~Gq~C~a~~~i~V~~~i~d~f~~~l~~~~~ 240 (414)
.+|+.|++.++ .+++|+++|+|||||+||++|||++.|++.+++++|.|+||.|+++++||||++++|+|++.|+++++
T Consensus 215 ~~G~~i~~~aa-~~l~~~~lElGGk~p~iV~~dAdl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~~~f~~~l~~~~~ 293 (462)
T PRK13968 215 RAGAAIGAQAG-AALKKCVLELGGSDPFIVLNDADLELAVKAAVAGRYQNTGQVCAAAKRFIIEEGIASAFTERFVAAAA 293 (462)
T ss_pred HHHHHHHHHHh-hcCCcEEEecCCCCceEECCCCCHHHHHHHHHHHHHhccCCCCcCCcEEEECHhHHHHHHHHHHHHHh
Confidence 99999999988 88999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hcccCCCCCCCCcccccCCHHHHHHHHHHHHHHHHcCCEEEeCCcccCCCCceeeeEEEeeCCCcccccccceecceEEE
Q 015042 241 AWLVGDPFDPTVRQGPQISERHFDRILSYIEHGKREGATLLTGGKPIGDKGYYIEPTIFTNVKEDMIIAKEEIFGPVMAL 320 (414)
Q Consensus 241 ~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v 320 (414)
++++|+|.++++++||+++..+++++.+++++++.+|+++++||......|+|++|||+.+++++|.+++||+||||++|
T Consensus 294 ~~~~g~p~~~~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~vl~gg~~~~~~g~~~~Ptvl~~v~~~~~~~~eE~FGPVl~v 373 (462)
T PRK13968 294 ALKMGDPRDEENALGPMARFDLRDELHHQVEATLAEGARLLLGGEKIAGAGNYYAPTVLANVTPEMTAFREELFGPVAAI 373 (462)
T ss_pred cCCcCCCCCCCCCcCCCCCHHHHHHHHHHHHHHHHCCCEEEeCCCcCCCCceEECCEEEeCCCCCChHHhCCCcCCEEEE
Confidence 99999999999999999999999999999999999999999999765445899999999999999999999999999999
Q ss_pred EeeCCHHHHHHHhhcCCCCceEEEecCCHHHHHHHHHhcceeEEEEcCcCCCCCCCCcccCCCCCCCccchHHHHHhhhe
Q 015042 321 MKFKTVEEAIKSANNTQYGLAAGIVTKDLNVANTVSRSIRAGIIWINCYFGFSMDCPYGGYKMSGFGREYGLESLYKYLQ 400 (414)
Q Consensus 321 ~~~~~~~eai~~~n~~~~gl~~sv~s~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~p~gG~~~sG~g~~~g~~~~~~~~~ 400 (414)
++|+|.+||++++|+++|||++||||+|.+.++++++++++|+|+||+.....+.+||||+|.||+|+++|++|+++||+
T Consensus 374 ~~~~d~~eai~~~n~~~~gLs~~v~t~d~~~a~~~~~~l~~G~v~iN~~~~~~~~~PfGG~k~SG~G~~~G~~~l~~ft~ 453 (462)
T PRK13968 374 TVAKDAEHALELANDSEFGLSATIFTTDETQARQMAARLECGGVFINGYCASDARVAFGGVKKSGFGRELSHFGLHEFCN 453 (462)
T ss_pred EEECCHHHHHHHHhCCCCcceEEEEcCCHHHHHHHHHhCCcceEEECCCCCCCCCCCCCCccccccCcCchHHHHHHhcc
Confidence 99999999999999999999999999999999999999999999999987777889999999999999999999999999
Q ss_pred eeEEEee
Q 015042 401 IKSVVTP 407 (414)
Q Consensus 401 ~k~i~~~ 407 (414)
.|+|+++
T Consensus 454 ~k~v~~~ 460 (462)
T PRK13968 454 IQTVWKD 460 (462)
T ss_pred eeEEEEe
Confidence 9999775
|
|
| >cd07141 ALDH_F1AB_F2_RALDH1 NAD+-dependent retinal dehydrogenase 1, ALDH families 1A, 1B, and 2-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-88 Score=691.57 Aligned_cols=406 Identities=57% Similarity=0.941 Sum_probs=383.5
Q ss_pred CHHHHHHHHHhHHHHHHHHHHhcCCChHHHhhchHHHHHHHHHHHHHhhhhhcCcccccCCCcccceeecCCceEEEEcC
Q 015042 1 MWKFADLIEEHVEELAALDALDAGKVYLRAKTAEIPGAAEFLRFFAGAADKIHGEVLKMSSELQGYTLREPVGVVGHIIP 80 (414)
Q Consensus 1 L~~~a~~l~~~~~~l~~~~~~etGk~~~e~~~~ei~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p 80 (414)
|+++++.|++++++|++++++|+|||..+....|+..+++.+++++.+.++..+...+...+...+.+++|+|||++|+|
T Consensus 75 L~~~a~~l~~~~~~la~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~a~~~~~~~g~~~~~~~~~~~~~~~~P~GVv~~I~p 154 (481)
T cd07141 75 LNKLADLIERDRAYLASLETLDNGKPFSKSYLVDLPGAIKVLRYYAGWADKIHGKTIPMDGDFFTYTRHEPVGVCGQIIP 154 (481)
T ss_pred HHHHHHHHHHhHHHHHHHHHHHcCCchHHHHHHHHHHHHHHHHHHHHHHHHhcCceecCCCCceEEEEEeceeEEEEEcc
Confidence 57899999999999999999999999976666799999999999999887776654433233456789999999999999
Q ss_pred CccchHHHHHhHHHHHhhCCeEEeecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhhHHHhhhCCCccEEEEeCCc
Q 015042 81 WNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLTALYYAHLAKLAGIPDGVLNVVPGFGPTAGAAICSHMDIDYVCFTGST 160 (414)
Q Consensus 81 ~n~P~~~~~~~~~~aLaaGN~vv~kps~~~~~~~~~l~~~l~~aG~p~g~v~~v~~~~~~~~~~l~~~~~v~~v~~tGs~ 160 (414)
||||+...++++++||++||+||+|||+.+|.++..+.+++.++|+|+|+++++++++.+.++.|+.||++|.|+||||+
T Consensus 155 ~N~P~~~~~~~~~~ALaaGN~VVlKps~~~p~~~~~l~~~l~~aGlP~gvv~~v~g~~~~~~~~L~~~~~vd~V~ftGs~ 234 (481)
T cd07141 155 WNFPLLMAAWKLAPALACGNTVVLKPAEQTPLTALYLASLIKEAGFPPGVVNVVPGYGPTAGAAISSHPDIDKVAFTGST 234 (481)
T ss_pred ChhHHHHHHHHHHHHHHcCCEEEEeCCCCCcHHHHHHHHHHHHcCcCccceEEEecCchHHHHHHhcCCCCCEEEEECcH
Confidence 99999999999999999999999999999999999999999999999999999999777788999999999999999999
Q ss_pred HHHHHHHHHHHhcccceeEEEcCCCCCceEcCCCCHHHHHHHHHHHhhccCCCCcccCceEEEeCchHHHHHHHHHHHHh
Q 015042 161 DVGRLVMQAAAASNLKQVSLELGGKSPLLIFDDADLDTAADVALLGNLYNKGEICVASSRVFVQEGIYDKFEKKLLEKAK 240 (414)
Q Consensus 161 ~~g~~i~~~~a~~~~~~~~~e~gg~~~~iV~~dadl~~aa~~i~~~~~~~~Gq~C~a~~~i~V~~~i~d~f~~~l~~~~~ 240 (414)
.+|+.|++.++..+++|+++|+|||||+||++|||++.|++.+++++|.++||.|+++++||||+++||+|+++|++.++
T Consensus 235 ~~g~~i~~~aa~~~~~~~~lElGG~~~~iV~~dADl~~A~~~i~~~~~~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~ 314 (481)
T cd07141 235 EVGKLIQQAAGKSNLKRVTLELGGKSPNIVFADADLDYAVEQAHEALFFNMGQCCCAGSRTFVQESIYDEFVKRSVERAK 314 (481)
T ss_pred HHHHHHHHHhhhhcCceEEEEcCCCCeEEECCCCCHHHHHHHHHHHHHhcCCCcccCCeEEEEcHHHHHHHHHHHHHHHH
Confidence 99999999887338999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hcccCCCCCCCCcccccCCHHHHHHHHHHHHHHHHcCCEEEeCCcccCCCCceeeeEEEeeCCCcccccccceecceEEE
Q 015042 241 AWLVGDPFDPTVRQGPQISERHFDRILSYIEHGKREGATLLTGGKPIGDKGYYIEPTIFTNVKEDMIIAKEEIFGPVMAL 320 (414)
Q Consensus 241 ~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v 320 (414)
++++|+|.++++++||++++.+++++.+++++++.+|+++++||...+..|+|++|||+.+++++|++++||+||||++|
T Consensus 315 ~~~~G~p~~~~~~~gpli~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v 394 (481)
T cd07141 315 KRVVGNPFDPKTEQGPQIDEEQFKKILELIESGKKEGAKLECGGKRHGDKGYFIQPTVFSDVTDDMRIAKEEIFGPVQQI 394 (481)
T ss_pred hCCCCCCCCCCCCCcCCCCHHHHHHHHHHHHHHHHCCCEEEeCCCcCCCCCeEEeeEEEecCCCCChhhhccccCCeEEE
Confidence 99999999999999999999999999999999999999999999876557899999999999999999999999999999
Q ss_pred EeeCCHHHHHHHhhcCCCCceEEEecCCHHHHHHHHHhcceeEEEEcCcCCCCCCCCcccCCCCCCCccchHHHHHhhhe
Q 015042 321 MKFKTVEEAIKSANNTQYGLAAGIVTKDLNVANTVSRSIRAGIIWINCYFGFSMDCPYGGYKMSGFGREYGLESLYKYLQ 400 (414)
Q Consensus 321 ~~~~~~~eai~~~n~~~~gl~~sv~s~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~p~gG~~~sG~g~~~g~~~~~~~~~ 400 (414)
++|+|++|||+++|+++|||++||||+|.+.++++++++++|+|+||++....+.+||||+|.||+|+++|.+++++||+
T Consensus 395 ~~~~~~~eai~~~n~~~~gLs~~vft~d~~~a~~~~~~l~~G~v~iN~~~~~~~~~PfGG~k~SG~G~~~g~~~~~~ft~ 474 (481)
T cd07141 395 FKFKTIDEVIERANNTTYGLAAAVFTKDIDKAITFSNALRAGTVWVNCYNVVSPQAPFGGYKMSGNGRELGEYGLQEYTE 474 (481)
T ss_pred EeeCCHHHHHHHHhCCCccceEEEECCCHHHHHHHHHhcCcCeEEECCCCCCCCCCCCCCcccCcCCccchHHHHHHHhh
Confidence 99999999999999999999999999999999999999999999999988777889999999999999999999999999
Q ss_pred eeEEEe
Q 015042 401 IKSVVT 406 (414)
Q Consensus 401 ~k~i~~ 406 (414)
+|+|++
T Consensus 475 ~k~v~~ 480 (481)
T cd07141 475 VKTVTI 480 (481)
T ss_pred eEEEEE
Confidence 999875
|
NAD+-dependent retinal dehydrogenase 1 (RALDH 1, ALDH1, EC=1.2.1.36) also known as aldehyde dehydrogenase family 1 member A1 (ALDH1A1) in humans, is a homotetrameric, cytosolic enzyme that catalyzes the oxidation of retinaldehyde to retinoic acid. Human ALDH1B1 and ALDH2 are also in this cluster; both are mitochrondrial homotetramers which play important roles in acetaldehyde oxidation; ALDH1B1 in response to UV light exposure and ALDH2 during ethanol metabolism. |
| >cd07117 ALDH_StaphAldA1 Uncharacterized Staphylococcus aureus AldA1 (SACOL0154) aldehyde dehydrogenase-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-88 Score=687.49 Aligned_cols=405 Identities=46% Similarity=0.787 Sum_probs=381.6
Q ss_pred CHHHHHHHHHhHHHHHHHHHHhcCCChHHHhhchHHHHHHHHHHHHHhhhhhcCcccccCCCcccceeecCCceEEEEcC
Q 015042 1 MWKFADLIEEHVEELAALDALDAGKVYLRAKTAEIPGAAEFLRFFAGAADKIHGEVLKMSSELQGYTLREPVGVVGHIIP 80 (414)
Q Consensus 1 L~~~a~~l~~~~~~l~~~~~~etGk~~~e~~~~ei~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p 80 (414)
|+++++.|++|+++|++++++|+|||..++...|+..+++.+++++..+.+..++..+...+...+++++|+|||++|+|
T Consensus 66 L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~~i~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~P~GVV~~I~P 145 (475)
T cd07117 66 LNKIADIIDENKELLAMVETLDNGKPIRETRAVDIPLAADHFRYFAGVIRAEEGSANMIDEDTLSIVLREPIGVVGQIIP 145 (475)
T ss_pred HHHHHHHHHHCHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCcccccCCCceeEEEEeecceEEEECC
Confidence 57899999999999999999999999998766799999999999998776655543332234456889999999999999
Q ss_pred CccchHHHHHhHHHHHhhCCeEEeecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhhHHHhhhCCCccEEEEeCCc
Q 015042 81 WNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLTALYYAHLAKLAGIPDGVLNVVPGFGPTAGAAICSHMDIDYVCFTGST 160 (414)
Q Consensus 81 ~n~P~~~~~~~~~~aLaaGN~vv~kps~~~~~~~~~l~~~l~~aG~p~g~v~~v~~~~~~~~~~l~~~~~v~~v~~tGs~ 160 (414)
||||+...++++++||++||+||+|||+.+|.++..+.+++.++ +|+|++|++++++.+.++.|+.|+++|.|.||||+
T Consensus 146 wN~Pl~~~~~~i~~AL~aGN~VvlKPs~~~p~~~~~l~~~~~~~-lP~g~~~~v~g~~~~~~~~l~~~~~v~~v~fTGs~ 224 (475)
T cd07117 146 WNFPFLMAAWKLAPALAAGNTVVIKPSSTTSLSLLELAKIIQDV-LPKGVVNIVTGKGSKSGEYLLNHPGLDKLAFTGST 224 (475)
T ss_pred CccHHHHHHHHHHHHHHcCCEEEEECCccCcHHHHHHHHHHHHh-CCcCcEEEEecCcHHHHHHHhcCCCCCEEEEECcH
Confidence 99999999999999999999999999999999999999999885 99999999998777889999999999999999999
Q ss_pred HHHHHHHHHHHhcccceeEEEcCCCCCceEcCCCCHHHHHHHHHHHhhccCCCCcccCceEEEeCchHHHHHHHHHHHHh
Q 015042 161 DVGRLVMQAAAASNLKQVSLELGGKSPLLIFDDADLDTAADVALLGNLYNKGEICVASSRVFVQEGIYDKFEKKLLEKAK 240 (414)
Q Consensus 161 ~~g~~i~~~~a~~~~~~~~~e~gg~~~~iV~~dadl~~aa~~i~~~~~~~~Gq~C~a~~~i~V~~~i~d~f~~~l~~~~~ 240 (414)
.+|+.|.+.++ ++++|+++|+|||||+||++|||++.|++.+++++|.|+||.|+++++||||++++|+|+++|++.++
T Consensus 225 ~~g~~i~~~aa-~~~~~~~lElgGk~p~iV~~dADl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~ 303 (475)
T cd07117 225 EVGRDVAIAAA-KKLIPATLELGGKSANIIFDDANWDKALEGAQLGILFNQGQVCCAGSRIFVQEGIYDEFVAKLKEKFE 303 (475)
T ss_pred HHHHHHHHHHh-ccCCcEEEeCCCCCeEEECCCCChHHHHHHHHHHHhhccCCCCCCCeEEEEeHHHHHHHHHHHHHHHH
Confidence 99999999987 88999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hcccCCCCCCCCcccccCCHHHHHHHHHHHHHHHHcCCEEEeCCcccC----CCCceeeeEEEeeCCCcccccccceecc
Q 015042 241 AWLVGDPFDPTVRQGPQISERHFDRILSYIEHGKREGATLLTGGKPIG----DKGYYIEPTIFTNVKEDMIIAKEEIFGP 316 (414)
Q Consensus 241 ~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~----~~g~~~~Ptvl~~~~~~~~~~~~E~fgP 316 (414)
++++|+|.++++.+||++++.+++++.+++++++++|+++++||.... +.|+|++|||+.+++++|++++||+|||
T Consensus 304 ~l~~g~p~~~~~~~gpli~~~~~~~v~~~v~~a~~~Ga~v~~gg~~~~~~~~~~g~~~~Ptvl~~~~~~~~i~~eE~FgP 383 (475)
T cd07117 304 NVKVGNPLDPDTQMGAQVNKDQLDKILSYVDIAKEEGAKILTGGHRLTENGLDKGFFIEPTLIVNVTNDMRVAQEEIFGP 383 (475)
T ss_pred hccCCCCCCCCCcccCcCCHHHHHHHHHHHHHHHHCCCEEEeCCCcCccccCCCCeEEeeEEeecCCCCChhhhCCCcCC
Confidence 999999999999999999999999999999999999999999997643 3689999999999999999999999999
Q ss_pred eEEEEeeCCHHHHHHHhhcCCCCceEEEecCCHHHHHHHHHhcceeEEEEcCcCCCCCCCCcccCCCCCCCccchHHHHH
Q 015042 317 VMALMKFKTVEEAIKSANNTQYGLAAGIVTKDLNVANTVSRSIRAGIIWINCYFGFSMDCPYGGYKMSGFGREYGLESLY 396 (414)
Q Consensus 317 vl~v~~~~~~~eai~~~n~~~~gl~~sv~s~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~p~gG~~~sG~g~~~g~~~~~ 396 (414)
|++|++|+|.+|||+++|+++|||++||||+|.+.+.++++++++|+|+||++....+.+||||+|.||+|+++|++|++
T Consensus 384 vl~v~~~~~~~eai~~~n~~~~gL~~~v~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~PfGG~k~SG~G~~~g~~~~~ 463 (475)
T cd07117 384 VATVIKFKTEDEVIDMANDSEYGLGGGVFTKDINRALRVARAVETGRVWVNTYNQIPAGAPFGGYKKSGIGRETHKSMLD 463 (475)
T ss_pred eEEEEEECCHHHHHHHHhCCCcCceEEEECCCHHHHHHHHHhCCcceEEECCCCCCCCCCCCCCCccCcCCCCchHHHHH
Confidence 99999999999999999999999999999999999999999999999999998777788999999999999999999999
Q ss_pred hhheeeEEEee
Q 015042 397 KYLQIKSVVTP 407 (414)
Q Consensus 397 ~~~~~k~i~~~ 407 (414)
+||++|+|+++
T Consensus 464 ~ft~~k~v~~~ 474 (475)
T cd07117 464 AYTQMKNIYID 474 (475)
T ss_pred HHhCeEEEEEe
Confidence 99999999764
|
Uncharacterized aldehyde dehydrogenase from Staphylococcus aureus (AldA1, locus SACOL0154) and other similar sequences are present in this CD. |
| >PRK13252 betaine aldehyde dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-88 Score=691.52 Aligned_cols=406 Identities=48% Similarity=0.798 Sum_probs=382.5
Q ss_pred CHHHHHHHHHhHHHHHHHHHHhcCCChHHHhhchHHHHHHHHHHHHHhhhhhcCcccccCCCcccceeecCCceEEEEcC
Q 015042 1 MWKFADLIEEHVEELAALDALDAGKVYLRAKTAEIPGAAEFLRFFAGAADKIHGEVLKMSSELQGYTLREPVGVVGHIIP 80 (414)
Q Consensus 1 L~~~a~~l~~~~~~l~~~~~~etGk~~~e~~~~ei~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p 80 (414)
|+++++.|++|+++|++++++|+|||..+++..|+..+++.++++++..+...+...+...+...+.+++|+|||++|+|
T Consensus 72 L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~~~~~~~~~g~~~~~~~~~~~~~~~~PlGVv~~I~p 151 (488)
T PRK13252 72 LRRAVDILRERNDELAALETLDTGKPIQETSVVDIVTGADVLEYYAGLAPALEGEQIPLRGGSFVYTRREPLGVCAGIGA 151 (488)
T ss_pred HHHHHHHHHHhHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCceeccCCCceEEEEEeeeeEEEEECC
Confidence 57899999999999999999999999998765699999999999998887665554333234456889999999999999
Q ss_pred CccchHHHHHhHHHHHhhCCeEEeecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhhHHHhhhCCCccEEEEeCCc
Q 015042 81 WNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLTALYYAHLAKLAGIPDGVLNVVPGFGPTAGAAICSHMDIDYVCFTGST 160 (414)
Q Consensus 81 ~n~P~~~~~~~~~~aLaaGN~vv~kps~~~~~~~~~l~~~l~~aG~p~g~v~~v~~~~~~~~~~l~~~~~v~~v~~tGs~ 160 (414)
||||+...++++++||++||+||+|||+.+|.++..+.++|.++|+|+|+||++++++. .++.|+.||++|.|.||||.
T Consensus 152 ~N~P~~~~~~~~~~ALaaGN~Vv~Kps~~~p~t~~~l~~~~~~aglP~g~v~~v~g~~~-~~~~L~~~~~vd~V~fTGS~ 230 (488)
T PRK13252 152 WNYPIQIACWKSAPALAAGNAMIFKPSEVTPLTALKLAEIYTEAGLPDGVFNVVQGDGR-VGAWLTEHPDIAKVSFTGGV 230 (488)
T ss_pred CchHHHHHHHHHHHHHhcCCeEEEeCCccCcHHHHHHHHHHHHcCcCcccEEEEecCcH-HHHHHhcCCCCCEEEEECcH
Confidence 99999999999999999999999999999999999999999999999999999998665 88999999999999999999
Q ss_pred HHHHHHHHHHHhcccceeEEEcCCCCCceEcCCCCHHHHHHHHHHHhhccCCCCcccCceEEEeCchHHHHHHHHHHHHh
Q 015042 161 DVGRLVMQAAAASNLKQVSLELGGKSPLLIFDDADLDTAADVALLGNLYNKGEICVASSRVFVQEGIYDKFEKKLLEKAK 240 (414)
Q Consensus 161 ~~g~~i~~~~a~~~~~~~~~e~gg~~~~iV~~dadl~~aa~~i~~~~~~~~Gq~C~a~~~i~V~~~i~d~f~~~l~~~~~ 240 (414)
.+|+.|.+.++ .+++|+++|+|||||+||++|||++.|++.+++++|.|+||.|+++++||||+++||+|+++|+++++
T Consensus 231 ~~g~~i~~~aa-~~l~~~~lElgG~~p~iV~~dAdl~~A~~~i~~~~~~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~ 309 (488)
T PRK13252 231 PTGKKVMAAAA-ASLKEVTMELGGKSPLIVFDDADLDRAADIAMLANFYSSGQVCTNGTRVFVQKSIKAAFEARLLERVE 309 (488)
T ss_pred HHHHHHHHHHh-hcCCcEEEEcCCCCeeEECCCCCHHHHHHHHHHHHHhhcCCCCCCCeEEEEcHHHHHHHHHHHHHHHH
Confidence 99999999888 78999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hcccCCCCCCCCcccccCCHHHHHHHHHHHHHHHHcCCEEEeCCcccC----CCCceeeeEEEeeCCCcccccccceecc
Q 015042 241 AWLVGDPFDPTVRQGPQISERHFDRILSYIEHGKREGATLLTGGKPIG----DKGYYIEPTIFTNVKEDMIIAKEEIFGP 316 (414)
Q Consensus 241 ~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~----~~g~~~~Ptvl~~~~~~~~~~~~E~fgP 316 (414)
++++|+|.++++++||++++.+++++++++++++++|+++++||.... ..|+|++|||+.+++++|++++||+|||
T Consensus 310 ~~~~g~p~~~~~~~gpli~~~~~~~~~~~i~~a~~~Ga~vl~gg~~~~~~~~~~g~~~~Ptvl~~v~~~~~i~~eE~FgP 389 (488)
T PRK13252 310 RIRIGDPMDPATNFGPLVSFAHRDKVLGYIEKGKAEGARLLCGGERLTEGGFANGAFVAPTVFTDCTDDMTIVREEIFGP 389 (488)
T ss_pred hcCCCCCCCCCCcccccCCHHHHHHHHHHHHHHHHCCCEEEeCCcccccccCCCCeEEccEEeccCCCCChHhhCCCCCc
Confidence 999999999999999999999999999999999999999999996432 3589999999999999999999999999
Q ss_pred eEEEEeeCCHHHHHHHhhcCCCCceEEEecCCHHHHHHHHHhcceeEEEEcCcCCCCCCCCcccCCCCCCCccchHHHHH
Q 015042 317 VMALMKFKTVEEAIKSANNTQYGLAAGIVTKDLNVANTVSRSIRAGIIWINCYFGFSMDCPYGGYKMSGFGREYGLESLY 396 (414)
Q Consensus 317 vl~v~~~~~~~eai~~~n~~~~gl~~sv~s~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~p~gG~~~sG~g~~~g~~~~~ 396 (414)
|++|++|+|++|||+++|+++|||++||||+|.+.++++++++++|.|+||++....+.+||||+|.||+|+++|++|++
T Consensus 390 vl~v~~~~~~~eai~~~n~~~~gL~a~I~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~PfGG~k~SG~G~~~g~~~~~ 469 (488)
T PRK13252 390 VMSVLTFDDEDEVIARANDTEYGLAAGVFTADLSRAHRVIHQLEAGICWINTWGESPAEMPVGGYKQSGIGRENGIATLE 469 (488)
T ss_pred eEEEEeeCCHHHHHHHHhCCCCCCeEEEEeCCHHHHHHHHHhcCccEEEECCCCCCCCCCCCCCCccCcCCcCChHHHHH
Confidence 99999999999999999999999999999999999999999999999999997777778999999999999999999999
Q ss_pred hhheeeEEEeeC
Q 015042 397 KYLQIKSVVTPI 408 (414)
Q Consensus 397 ~~~~~k~i~~~~ 408 (414)
+||++|+|+.+.
T Consensus 470 ~ft~~k~i~~~~ 481 (488)
T PRK13252 470 HYTQIKSVQVEM 481 (488)
T ss_pred HhcceEEEEEeC
Confidence 999999998764
|
|
| >PRK09406 gabD1 succinic semialdehyde dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-88 Score=684.57 Aligned_cols=403 Identities=34% Similarity=0.562 Sum_probs=378.5
Q ss_pred CHHHHHHHHHhHHHHHHHHHHhcCCChHHHhhchHHHHHHHHHHHHHhhhhhcCcccccC---CCcccceeecCCceEEE
Q 015042 1 MWKFADLIEEHVEELAALDALDAGKVYLRAKTAEIPGAAEFLRFFAGAADKIHGEVLKMS---SELQGYTLREPVGVVGH 77 (414)
Q Consensus 1 L~~~a~~l~~~~~~l~~~~~~etGk~~~e~~~~ei~~~~~~l~~~a~~~~~~~~~~~~~~---~~~~~~~~~~P~Gvv~~ 77 (414)
|+++++.|++++++|++++++|+|||..++ ..|+..+++.+++++..+++..+...... .+...+++++|+|||++
T Consensus 51 L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a-~~ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GvV~~ 129 (457)
T PRK09406 51 ANAAADLLEAEADQVAALMTLEMGKTLASA-KAEALKCAKGFRYYAEHAEALLADEPADAAAVGASRAYVRYQPLGVVLA 129 (457)
T ss_pred HHHHHHHHHHCHHHHHHHHHHhcCCCHHHH-HHHHHHHHHHHHHHHHHHHHHhCCccccccCCCCceEEEEEecceeEEE
Confidence 578999999999999999999999999986 46999999999999988876644322111 22356788999999999
Q ss_pred EcCCccchHHHHHhHHHHHhhCCeEEeecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhhHHHhhhCCCccEEEEe
Q 015042 78 IIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLTALYYAHLAKLAGIPDGVLNVVPGFGPTAGAAICSHMDIDYVCFT 157 (414)
Q Consensus 78 i~p~n~P~~~~~~~~~~aLaaGN~vv~kps~~~~~~~~~l~~~l~~aG~p~g~v~~v~~~~~~~~~~l~~~~~v~~v~~t 157 (414)
|+|||||++..++++++||++||+||+|||+.+|.++..+.+++.++|+|+|+|+++++ +.+.+..|+.|+++++|.||
T Consensus 130 I~PwN~Pl~~~~~~~~~ALaaGN~VV~Kps~~~p~~~~~l~~l~~~aGlP~gvv~~v~~-g~~~~~~l~~~~~i~~V~fT 208 (457)
T PRK09406 130 VMPWNFPLWQVVRFAAPALMAGNVGLLKHASNVPQTALYLADLFRRAGFPDGCFQTLLV-GSGAVEAILRDPRVAAATLT 208 (457)
T ss_pred ECCccchHHHHHHHHHHHHHcCCEEEEECCCcCcHHHHHHHHHHHHhCCCcCcEEEEcC-CchhHHHHhcCCCcCEEEEE
Confidence 99999999999999999999999999999999999999999999999999999999986 44567889999999999999
Q ss_pred CCcHHHHHHHHHHHhcccceeEEEcCCCCCceEcCCCCHHHHHHHHHHHhhccCCCCcccCceEEEeCchHHHHHHHHHH
Q 015042 158 GSTDVGRLVMQAAAASNLKQVSLELGGKSPLLIFDDADLDTAADVALLGNLYNKGEICVASSRVFVQEGIYDKFEKKLLE 237 (414)
Q Consensus 158 Gs~~~g~~i~~~~a~~~~~~~~~e~gg~~~~iV~~dadl~~aa~~i~~~~~~~~Gq~C~a~~~i~V~~~i~d~f~~~l~~ 237 (414)
||+.+|+.|.+.++ .+++|+++|+|||||+||++|||++.|++.+++++|.|+||.|+++++||||++++|+|+++|++
T Consensus 209 Gs~~~G~~i~~~a~-~~~~~~~lElGG~~~~iV~~dadl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~ 287 (457)
T PRK09406 209 GSEPAGRAVAAIAG-DEIKKTVLELGGSDPFIVMPSADLDRAAETAVTARVQNNGQSCIAAKRFIVHADVYDAFAEKFVA 287 (457)
T ss_pred CcHHHHHHHHHHHH-hcCCceeeecCCCCeeEECCCCCHHHHHHHHHHHHhhCCCCcccCCeEEEEcHHHHHHHHHHHHH
Confidence 99999999999887 88999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhhcccCCCCCCCCcccccCCHHHHHHHHHHHHHHHHcCCEEEeCCcccCCCCceeeeEEEeeCCCcccccccceecce
Q 015042 238 KAKAWLVGDPFDPTVRQGPQISERHFDRILSYIEHGKREGATLLTGGKPIGDKGYYIEPTIFTNVKEDMIIAKEEIFGPV 317 (414)
Q Consensus 238 ~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPv 317 (414)
+++++++|+|.++++++||+++..+++++++++++++++|+++++||....+.|+|++|||+.+++++|.+++||+||||
T Consensus 288 ~~~~l~~g~p~~~~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~~l~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPv 367 (457)
T PRK09406 288 RMAALRVGDPTDPDTDVGPLATEQGRDEVEKQVDDAVAAGATILCGGKRPDGPGWFYPPTVITDITPDMRLYTEEVFGPV 367 (457)
T ss_pred HHhhCCCCCCCCCCCCCCCCcCHHHHHHHHHHHHHHHHCCCEEEeCCCcCCCCCceEccEEeecCCCCCHHhhCCCCCce
Confidence 99999999999999999999999999999999999999999999999875557999999999999999999999999999
Q ss_pred EEEEeeCCHHHHHHHhhcCCCCceEEEecCCHHHHHHHHHhcceeEEEEcCcCCCCCCCCcccCCCCCCCccchHHHHHh
Q 015042 318 MALMKFKTVEEAIKSANNTQYGLAAGIVTKDLNVANTVSRSIRAGIIWINCYFGFSMDCPYGGYKMSGFGREYGLESLYK 397 (414)
Q Consensus 318 l~v~~~~~~~eai~~~n~~~~gl~~sv~s~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~p~gG~~~sG~g~~~g~~~~~~ 397 (414)
++|++|+|.+||++++|+++|||++||||+|.+.++++++++++|+|+||+++...+.+||||+|.||+|+++|++++++
T Consensus 368 l~v~~~~~~~eai~~~n~~~~gL~~~v~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~PfGG~k~SG~G~~~g~~~l~~ 447 (457)
T PRK09406 368 ASLYRVADIDEAIEIANATTFGLGSNAWTRDEAEQERFIDDLEAGQVFINGMTVSYPELPFGGVKRSGYGRELSAHGIRE 447 (457)
T ss_pred EEEEeeCCHHHHHHHHhCCCCCceEEEEcCCHHHHHHHHHhCCcceEEECCCCCCCCCCCCCCccccccCccchHHHHHH
Confidence 99999999999999999999999999999999999999999999999999988777889999999999999999999999
Q ss_pred hheeeEEEe
Q 015042 398 YLQIKSVVT 406 (414)
Q Consensus 398 ~~~~k~i~~ 406 (414)
||+.|+|++
T Consensus 448 ~t~~k~v~~ 456 (457)
T PRK09406 448 FCNIKTVWI 456 (457)
T ss_pred hhceEEEEe
Confidence 999999864
|
|
| >TIGR03216 OH_muco_semi_DH 2-hydroxymuconic semialdehyde dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=3e-88 Score=688.73 Aligned_cols=406 Identities=40% Similarity=0.697 Sum_probs=380.1
Q ss_pred CHHHHHHHHHhHHHHHHHHHHhcCCChHHHhhchHHHHHHHHHHHHHhhhhhcCcccccC----CCcccceeecCCceEE
Q 015042 1 MWKFADLIEEHVEELAALDALDAGKVYLRAKTAEIPGAAEFLRFFAGAADKIHGEVLKMS----SELQGYTLREPVGVVG 76 (414)
Q Consensus 1 L~~~a~~l~~~~~~l~~~~~~etGk~~~e~~~~ei~~~~~~l~~~a~~~~~~~~~~~~~~----~~~~~~~~~~P~Gvv~ 76 (414)
|+++++.|++|+++|++++++|+|||..+....|+..+++.+++++...++..+...+.. .+...+.+++|+|||+
T Consensus 65 L~~~a~~l~~~~~ela~~~~~e~Gk~~~~~~~~ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~ 144 (481)
T TIGR03216 65 LYAVADEIERRFDDFLAAEVADTGKPRSLASHLDIPRGAANFRVFADVVKNAPTECFEMATPDGKGALNYAVRKPLGVVG 144 (481)
T ss_pred HHHHHHHHHHhHHHHHHHHHHHcCCcHHHHhHHHHHHHHHHHHHHHHHHHHhcCccccccCCCCCCceeEEEEeccceEE
Confidence 578999999999999999999999999876556999999999999988766544433211 1234578899999999
Q ss_pred EEcCCccchHHHHHhHHHHHhhCCeEEeecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCch-hhHHHhhhCCCccEEE
Q 015042 77 HIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLTALYYAHLAKLAGIPDGVLNVVPGFGP-TAGAAICSHMDIDYVC 155 (414)
Q Consensus 77 ~i~p~n~P~~~~~~~~~~aLaaGN~vv~kps~~~~~~~~~l~~~l~~aG~p~g~v~~v~~~~~-~~~~~l~~~~~v~~v~ 155 (414)
+|+|||||+...++++++||++||+||+|||+.+|.++.++.++|.++|+|+|+++++++++. +.++.|..||++|.|.
T Consensus 145 ~I~p~N~Pl~~~~~~~~~ALaaGN~vvlKPs~~tp~t~~~l~~l~~~aglP~g~~~~v~g~~~~~~~~~l~~~~~vd~v~ 224 (481)
T TIGR03216 145 VISPWNLPLLLMTWKVGPALACGNTVVVKPSEETPGTATLLGEVMNAVGVPKGVYNVVHGFGPDSAGEFLTRHPGVDAIT 224 (481)
T ss_pred EECCCCcHHHHHHHHHHHHHHcCCEEEEECCccchHHHHHHHHHHHHcCCCcCceEEEecCChhHHHHHHhcCCCCCEEE
Confidence 999999999999999999999999999999999999999999999999999999999998654 4788899999999999
Q ss_pred EeCCcHHHHHHHHHHHhcccceeEEEcCCCCCceEcCCCCHHHHHHHHHHHhhccCCCCcccCceEEEeCchHHHHHHHH
Q 015042 156 FTGSTDVGRLVMQAAAASNLKQVSLELGGKSPLLIFDDADLDTAADVALLGNLYNKGEICVASSRVFVQEGIYDKFEKKL 235 (414)
Q Consensus 156 ~tGs~~~g~~i~~~~a~~~~~~~~~e~gg~~~~iV~~dadl~~aa~~i~~~~~~~~Gq~C~a~~~i~V~~~i~d~f~~~l 235 (414)
||||+.+|+.|.+.++ ++++|+++|+|||||+||++|||++.|++.+++++|.|+||.|+++++||||++++|+|+++|
T Consensus 225 fTGS~~~G~~i~~~aa-~~~~~~~lElgG~n~~iV~~dadl~~aa~~i~~~~f~~~GQ~C~a~~rv~V~~~i~~~f~~~l 303 (481)
T TIGR03216 225 FTGETRTGSAIMKAAA-DGVKPVSFELGGKNAAIVFADCDFDAAVAGILRSAFLNTGQVCLGTERVYVERPIFDRFVAAL 303 (481)
T ss_pred EECCHHHHHHHHHHHh-cCCCeEEEECCCCCeEEECCCCCHHHHHHHHHHHHHhcCCCCCCCCeEEEEcHHHHHHHHHHH
Confidence 9999999999999988 889999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhhcccCCCCCCCCcccccCCHHHHHHHHHHHHHHHHcCCEEEeCCcccC-----CCCceeeeEEEeeCCCcccccc
Q 015042 236 LEKAKAWLVGDPFDPTVRQGPQISERHFDRILSYIEHGKREGATLLTGGKPIG-----DKGYYIEPTIFTNVKEDMIIAK 310 (414)
Q Consensus 236 ~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~-----~~g~~~~Ptvl~~~~~~~~~~~ 310 (414)
.++++++++|+|.++++++||++++.+++++++++++++++|+++++||.... .+|+|++|||+.+++++|.+++
T Consensus 304 ~~~~~~~~~g~p~~~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~v~~gg~~~~~~~~~~~g~~~~PTvl~~v~~~~~i~~ 383 (481)
T TIGR03216 304 KARAESLKIGVPDDPATNMGPLISAEHRDKVLSYYALAVEEGATVVTGGGVPDFGDALAGGAWVQPTIWTGLPDSARVVT 383 (481)
T ss_pred HHHHHhcCCCCCCCCCCcCCCCCCHHHHHHHHHHHHHHHHCCCEEEeCCCcccccccCCCCceEccEEEeCCCCCCHHHh
Confidence 99999999999999999999999999999999999999999999999997532 3699999999999999999999
Q ss_pred cceecceEEEEeeCCHHHHHHHhhcCCCCceEEEecCCHHHHHHHHHhcceeEEEEcCcCCCCCCCCcccCCCCCCCccc
Q 015042 311 EEIFGPVMALMKFKTVEEAIKSANNTQYGLAAGIVTKDLNVANTVSRSIRAGIIWINCYFGFSMDCPYGGYKMSGFGREY 390 (414)
Q Consensus 311 ~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~sv~s~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~p~gG~~~sG~g~~~ 390 (414)
||+||||++|++|+|.+|||+++|+++|||++||||+|.+.++++++++++|.|+||+.....+.+||||+|.||+|+++
T Consensus 384 eE~FgPvl~V~~~~~~~eai~~~n~~~~gL~~~v~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~PfGG~k~SG~G~~~ 463 (481)
T TIGR03216 384 EEIFGPCCHIAPFDSEEEVIALANDTPYGLAASVWTEDLSRAHRVARQMEVGIVWVNSWFLRDLRTPFGGSKLSGIGREG 463 (481)
T ss_pred CCCCCceEEEEEeCCHHHHHHHHhCCCccceEEEECCCHHHHHHHHHhcCccEEEECCCCCCCCCCCcCCcccCcCCcCc
Confidence 99999999999999999999999999999999999999999999999999999999998777778999999999999999
Q ss_pred hHHHHHhhheeeEEEee
Q 015042 391 GLESLYKYLQIKSVVTP 407 (414)
Q Consensus 391 g~~~~~~~~~~k~i~~~ 407 (414)
|.+|+++||++|+|+++
T Consensus 464 g~~~l~~f~~~k~v~~~ 480 (481)
T TIGR03216 464 GVHSLEFYTELTNVCIK 480 (481)
T ss_pred hHHHHHHhhceEEEEEe
Confidence 99999999999999765
|
Members of this protein family are 2-hydroxymuconic semialdehyde dehydrogenase. Many aromatic compounds are catabolized by way of the catechol, via the meta-cleavage pathway, to pyruvate and acetyl-CoA. This enzyme performs the second of seven steps in that pathway for catechol degradation. |
| >cd07143 ALDH_AldA_AN0554 Aspergillus nidulans aldehyde dehydrogenase, AldA (AN0554)-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.3e-88 Score=686.92 Aligned_cols=407 Identities=55% Similarity=0.914 Sum_probs=384.1
Q ss_pred CHHHHHHHHHhHHHHHHHHHHhcCCChHHHhhchHHHHHHHHHHHHHhhhhhcCcccccCCCcccceeecCCceEEEEcC
Q 015042 1 MWKFADLIEEHVEELAALDALDAGKVYLRAKTAEIPGAAEFLRFFAGAADKIHGEVLKMSSELQGYTLREPVGVVGHIIP 80 (414)
Q Consensus 1 L~~~a~~l~~~~~~l~~~~~~etGk~~~e~~~~ei~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p 80 (414)
|+++++.|++|+++|++++++|+|||..+....|+..+++.+++++.++++..+...+...+...+.+++|+|||++|+|
T Consensus 74 L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~~~~~a~~a~~~~g~~~~~~~~~~~~~~~~P~GVv~~I~P 153 (481)
T cd07143 74 LSKLADLMERNLDYLASIEALDNGKTFGTAKRVDVQASADTFRYYGGWADKIHGQVIETDIKKLTYTRHEPIGVCGQIIP 153 (481)
T ss_pred HHHHHHHHHHhHHHHHHHHHHHcCCChHHHHHHHHHHHHHHHHHHHHHHHHhcCccccCCCCceEEEEEecceeEEEECC
Confidence 57899999999999999999999999976666699999999999999987765554433334456789999999999999
Q ss_pred CccchHHHHHhHHHHHhhCCeEEeecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhhHHHhhhCCCccEEEEeCCc
Q 015042 81 WNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLTALYYAHLAKLAGIPDGVLNVVPGFGPTAGAAICSHMDIDYVCFTGST 160 (414)
Q Consensus 81 ~n~P~~~~~~~~~~aLaaGN~vv~kps~~~~~~~~~l~~~l~~aG~p~g~v~~v~~~~~~~~~~l~~~~~v~~v~~tGs~ 160 (414)
||||+...++++++||++||+||+|||+.+|.++..+.+++.++|+|+|+++++++++.+.++.|+.||++|.|.||||+
T Consensus 154 ~N~P~~~~~~~~~~ALaaGN~VvlKps~~~p~~~~~l~~~l~~aGlP~g~v~~v~g~~~~~~~~L~~~~~vd~V~fTGs~ 233 (481)
T cd07143 154 WNFPLLMCAWKIAPALAAGNTIVLKPSELTPLSALYMTKLIPEAGFPPGVINVVSGYGRTCGNAISSHMDIDKVAFTGST 233 (481)
T ss_pred CcChHHHHHHHHHHHHHcCCEEEEeCCCCCcHHHHHHHHHHHhcCcCcccEEEEeCCchhHHHHHhcCCCCCEEEEECch
Confidence 99999999999999999999999999999999999999999999999999999999777789999999999999999999
Q ss_pred HHHHHHHHHHHhcccceeEEEcCCCCCceEcCCCCHHHHHHHHHHHhhccCCCCcccCceEEEeCchHHHHHHHHHHHHh
Q 015042 161 DVGRLVMQAAAASNLKQVSLELGGKSPLLIFDDADLDTAADVALLGNLYNKGEICVASSRVFVQEGIYDKFEKKLLEKAK 240 (414)
Q Consensus 161 ~~g~~i~~~~a~~~~~~~~~e~gg~~~~iV~~dadl~~aa~~i~~~~~~~~Gq~C~a~~~i~V~~~i~d~f~~~l~~~~~ 240 (414)
.+|+.|++.++...++|+++|+|||||+||++|||++.|++.+++++|.|+||.|+++++||||++++|+|+++|++.++
T Consensus 234 ~~G~~i~~~aa~~~~~~~~lElGG~~p~iV~~dADl~~Aa~~i~~~~~~naGQ~C~a~~rv~V~~~i~d~f~~~l~~~~~ 313 (481)
T cd07143 234 LVGRKVMEAAAKSNLKKVTLELGGKSPNIVFDDADLESAVVWTAYGIFFNHGQVCCAGSRIYVQEGIYDKFVKRFKEKAK 313 (481)
T ss_pred HHHHHHHHHHHHhcCCEEEeecCCCCeeEECCCCCHHHHHHHHHHHHHhccCCCCCCCcEEEEeHhHHHHHHHHHHHHHH
Confidence 99999999887337899999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hcccCCCCCCCCcccccCCHHHHHHHHHHHHHHHHcCCEEEeCCcccCCCCceeeeEEEeeCCCcccccccceecceEEE
Q 015042 241 AWLVGDPFDPTVRQGPQISERHFDRILSYIEHGKREGATLLTGGKPIGDKGYYIEPTIFTNVKEDMIIAKEEIFGPVMAL 320 (414)
Q Consensus 241 ~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v 320 (414)
++++|+|.++++++||+++..+++++.+++++++.+|+++++||......|+|+.|||+.++++++.+++||+||||++|
T Consensus 314 ~~~~G~p~~~~~~~gpli~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v 393 (481)
T cd07143 314 KLKVGDPFAEDTFQGPQVSQIQYERIMSYIESGKAEGATVETGGKRHGNEGYFIEPTIFTDVTEDMKIVKEEIFGPVVAV 393 (481)
T ss_pred hcCCCCCCCCCCCCCCCcCHHHHHHHHHHHHHHHhCCCEEEeCCCCCCCCceEEeeEEEecCCCCChhhhcCCcCCeEEE
Confidence 99999999999999999999999999999999999999999999875557899999999999999999999999999999
Q ss_pred EeeCCHHHHHHHhhcCCCCceEEEecCCHHHHHHHHHhcceeEEEEcCcCCCCCCCCcccCCCCCCCccchHHHHHhhhe
Q 015042 321 MKFKTVEEAIKSANNTQYGLAAGIVTKDLNVANTVSRSIRAGIIWINCYFGFSMDCPYGGYKMSGFGREYGLESLYKYLQ 400 (414)
Q Consensus 321 ~~~~~~~eai~~~n~~~~gl~~sv~s~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~p~gG~~~sG~g~~~g~~~~~~~~~ 400 (414)
++|+|.+||++++|+++|||++||||+|.+.+.++++++++|+|+||++....+.+||||+|.||+|+++|++++++||+
T Consensus 394 ~~~~~~~eai~~~n~~~~gL~~~v~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~PfGG~k~SG~G~~~G~~~l~~~t~ 473 (481)
T cd07143 394 IKFKTEEEAIKRANDSTYGLAAAVFTNNINNAIRVANALKAGTVWVNCYNLLHHQVPFGGYKQSGIGRELGEYALENYTQ 473 (481)
T ss_pred EeeCCHHHHHHHHhCCCCCceEEEECCCHHHHHHHHHhcCcCeEEECCCCCCCCCCCCCCccccccCcccHHHHHHHHhC
Confidence 99999999999999999999999999999999999999999999999988777889999999999999999999999999
Q ss_pred eeEEEee
Q 015042 401 IKSVVTP 407 (414)
Q Consensus 401 ~k~i~~~ 407 (414)
+|+|+++
T Consensus 474 ~k~i~~~ 480 (481)
T cd07143 474 IKAVHIN 480 (481)
T ss_pred eEEEEEe
Confidence 9999765
|
NAD(P)+-dependent aldehyde dehydrogenase (AldA) of Aspergillus nidulans (locus AN0554), and other similar sequences, are present in this CD. |
| >TIGR01780 SSADH succinate-semialdehyde dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-88 Score=685.24 Aligned_cols=400 Identities=42% Similarity=0.712 Sum_probs=377.3
Q ss_pred CHHHHHHHHHhHHHHHHHHHHhcCCChHHHhhchHHHHHHHHHHHHHhhhhhcCcccccC-CCcccceeecCCceEEEEc
Q 015042 1 MWKFADLIEEHVEELAALDALDAGKVYLRAKTAEIPGAAEFLRFFAGAADKIHGEVLKMS-SELQGYTLREPVGVVGHII 79 (414)
Q Consensus 1 L~~~a~~l~~~~~~l~~~~~~etGk~~~e~~~~ei~~~~~~l~~~a~~~~~~~~~~~~~~-~~~~~~~~~~P~Gvv~~i~ 79 (414)
|+++++.|++++++|++++++|+|||..++ ..|+..+++.+++++....+..+...+.. .+...+.+++|+|||++|+
T Consensus 47 L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a-~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~I~ 125 (448)
T TIGR01780 47 LRKWYNLMMENKDDLARLITLENGKPLKEA-KGEILYAASFLEWFAEEAKRVYGDTIPSPQSDKRLLVIKQPVGVCAAIT 125 (448)
T ss_pred HHHHHHHHHHhHHHHHHHHHHHcCCCHHHH-HHHHHHHHHHHHHHHHHHHHhcCccccCCCCCceeEEEEeeeeEEEEEc
Confidence 578999999999999999999999999975 46999999999999987776655433322 3445577899999999999
Q ss_pred CCccchHHHHHhHHHHHhhCCeEEeecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCC-chhhHHHhhhCCCccEEEEeC
Q 015042 80 PWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLTALYYAHLAKLAGIPDGVLNVVPGF-GPTAGAAICSHMDIDYVCFTG 158 (414)
Q Consensus 80 p~n~P~~~~~~~~~~aLaaGN~vv~kps~~~~~~~~~l~~~l~~aG~p~g~v~~v~~~-~~~~~~~l~~~~~v~~v~~tG 158 (414)
|||||+...++++++||++||+||+|||+.+|+++..+.++|.++|+|+|++|+++++ +.+.++.|+.||++|.|.|||
T Consensus 126 p~N~P~~~~~~~~~~ALaaGN~VvlKps~~~p~~~~~l~~~~~~aGlP~gvv~~v~g~~~~~~~~~l~~~~~i~~v~ftG 205 (448)
T TIGR01780 126 PWNFPAAMITRKAGAALAAGCTVVVKPAEQTPLSALALARLAEQAGIPKGVLNVITGSRAKEVGKVLCTSPLVRKISFTG 205 (448)
T ss_pred CCChHHHHHHHHHHHHHHcCCeEeeECCccchHHHHHHHHHHHHcCCCccceEEEeCCCchHHHHHHhcCCCCCEEEEEC
Confidence 9999999999999999999999999999999999999999999999999999999996 577889999999999999999
Q ss_pred CcHHHHHHHHHHHhcccceeEEEcCCCCCceEcCCCCHHHHHHHHHHHhhccCCCCcccCceEEEeCchHHHHHHHHHHH
Q 015042 159 STDVGRLVMQAAAASNLKQVSLELGGKSPLLIFDDADLDTAADVALLGNLYNKGEICVASSRVFVQEGIYDKFEKKLLEK 238 (414)
Q Consensus 159 s~~~g~~i~~~~a~~~~~~~~~e~gg~~~~iV~~dadl~~aa~~i~~~~~~~~Gq~C~a~~~i~V~~~i~d~f~~~l~~~ 238 (414)
|+.+|+.|++.++ .+++|+++|+|||||+||++|||++.|++.+++++|.|+||.|+++++||||+++||+|+++|+++
T Consensus 206 s~~~g~~v~~~aa-~~~~~~~lElGGk~~~iV~~dadl~~aa~~iv~~~f~~sGQ~C~a~~rv~V~~~i~d~f~~~l~~~ 284 (448)
T TIGR01780 206 STNVGKILMKQSA-STVKKVSMELGGNAPFIVFDDADIDQAVEGAMASKFRNAGQTCVCANRLYVHDGIYDEFAKKLAEA 284 (448)
T ss_pred cHHHHHHHHHHHh-hcCCceEeecCCCCeeEECCCCCHHHHHHHHHHHHHHhcCCcccCCceeechHHHHHHHHHHHHHH
Confidence 9999999999988 789999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhhcccCCCCCCCCcccccCCHHHHHHHHHHHHHHHHcCCEEEeCCcccCCCCceeeeEEEeeCCCcccccccceecceE
Q 015042 239 AKAWLVGDPFDPTVRQGPQISERHFDRILSYIEHGKREGATLLTGGKPIGDKGYYIEPTIFTNVKEDMIIAKEEIFGPVM 318 (414)
Q Consensus 239 ~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl 318 (414)
++++++|+|.++++++||++++.+++++++++++++++|+++++||......|+|++|||+.+++++|.+++||+||||+
T Consensus 285 ~~~l~~G~p~~~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~il~gg~~~~~~g~~~~Ptvl~~~~~~~~i~~eE~FGPvl 364 (448)
T TIGR01780 285 VKKLKVGNGLDEGVTQGPLINEKAVEKVEKHIADAVEKGAKVVTGGKRHELGGNFFEPTVLSNVTQDMLVAKEETFGPLA 364 (448)
T ss_pred HHhcCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCEEEeCCCcCCCCCeeEcCEEEecCCCCChHhhCCCCCceE
Confidence 99999999999999999999999999999999999999999999997654568999999999999999999999999999
Q ss_pred EEEeeCCHHHHHHHhhcCCCCceEEEecCCHHHHHHHHHhcceeEEEEcCcCCCCCCCCcccCCCCCCCccchHHHHHhh
Q 015042 319 ALMKFKTVEEAIKSANNTQYGLAAGIVTKDLNVANTVSRSIRAGIIWINCYFGFSMDCPYGGYKMSGFGREYGLESLYKY 398 (414)
Q Consensus 319 ~v~~~~~~~eai~~~n~~~~gl~~sv~s~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~p~gG~~~sG~g~~~g~~~~~~~ 398 (414)
+|++|+|.+||++++|+++|||++||||+|.+.++++++++++|.|+||++....+.+||||+|.||+|+++|++|+++|
T Consensus 365 ~v~~~~~~~eai~~an~~~~gL~~~vfs~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~pfGG~k~SG~G~~~g~~~~~~~ 444 (448)
T TIGR01780 365 PVFKFDDEEEVIAIANDTEVGLAAYFFSRDLATIWRVAEALEYGMVGINTGLISNVVAPFGGVKQSGLGREGSKYGIEEY 444 (448)
T ss_pred EEEEECCHHHHHHHHhCCCcCceEEEECCCHHHHHHHHHhCCccEEEECCCCCCCCCCCCCCcccccCCccchHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999877777899999999999999999999999
Q ss_pred heee
Q 015042 399 LQIK 402 (414)
Q Consensus 399 ~~~k 402 (414)
|++|
T Consensus 445 ~~~k 448 (448)
T TIGR01780 445 LETK 448 (448)
T ss_pred hccC
Confidence 9976
|
SSADH enzyme belongs to the aldehyde dehydrogenase family (pfam00171), sharing a common evolutionary origin and enzymatic mechanism with lactaldehyde dehydrogenase. Like in lactaldehyde dehydrogenase and succinate semialdehyde dehydrogenase, the mammalian catalytic glutamic acid and cysteine residues are conserved in all the enzymes of this family (PS00687, PS00070). |
| >cd07120 ALDH_PsfA-ACA09737 Pseudomonas putida aldehyde dehydrogenase PsfA (ACA09737)-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.3e-88 Score=682.53 Aligned_cols=404 Identities=39% Similarity=0.637 Sum_probs=381.5
Q ss_pred CHHHHHHHHHhHHHHHHHHHHhcCCChHHHhhchHHHHHHHHHHHHHhhhhhcCcccccCCCcccceeecCCceEEEEcC
Q 015042 1 MWKFADLIEEHVEELAALDALDAGKVYLRAKTAEIPGAAEFLRFFAGAADKIHGEVLKMSSELQGYTLREPVGVVGHIIP 80 (414)
Q Consensus 1 L~~~a~~l~~~~~~l~~~~~~etGk~~~e~~~~ei~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p 80 (414)
|+++++.|++|+++|++++++|+|||..++. .|+..+++.+++++...++..+...+...+...+.+++|+|||++|+|
T Consensus 48 L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~-~Ev~~~i~~l~~~~~~~~~~~g~~~~~~~~~~~~~~~~P~Gvv~~I~P 126 (455)
T cd07120 48 LLELADAFEANAERLARLLALENGKILGEAR-FEISGAISELRYYAGLARTEAGRMIEPEPGSFSLVLREPMGVAGIIVP 126 (455)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHcCCCHHHHH-HHHHHHHHHHHHHHHHHHHhcCcccccCCCceEEEEEecceeEEEECC
Confidence 5789999999999999999999999999865 599999999999998887765544332234567899999999999999
Q ss_pred CccchHHHHHhHHHHHhhCCeEEeecCCCChHHHHHHHHHHHH-cCCCCCcEEEEeCCchhhHHHhhhCCCccEEEEeCC
Q 015042 81 WNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLTALYYAHLAKL-AGIPDGVLNVVPGFGPTAGAAICSHMDIDYVCFTGS 159 (414)
Q Consensus 81 ~n~P~~~~~~~~~~aLaaGN~vv~kps~~~~~~~~~l~~~l~~-aG~p~g~v~~v~~~~~~~~~~l~~~~~v~~v~~tGs 159 (414)
||||+...++++++||++||+||+|||+.+|.++..++++|.+ +|+|+|+++++++++.+.++.|+.||++|.|.||||
T Consensus 127 ~N~P~~~~~~~~~~AL~aGN~vvlKps~~~~~~~~~l~~~~~~aag~P~g~~~~v~g~~~~~~~~l~~~~~v~~v~fTGs 206 (455)
T cd07120 127 WNSPVVLLVRSLAPALAAGCTVVVKPAGQTAQINAAIIRILAEIPSLPAGVVNLFTESGSEGAAHLVASPDVDVISFTGS 206 (455)
T ss_pred CchHHHHHHHHHHHHHHcCCEEEeECCCCChHHHHHHHHHHHHhcCCCccceEEEecCchhHHHHHhcCCCCCEEEEECC
Confidence 9999999999999999999999999999999999999999999 799999999999877778999999999999999999
Q ss_pred cHHHHHHHHHHHhcccceeEEEcCCCCCceEcCCCCHHHHHHHHHHHhhccCCCCcccCceEEEeCchHHHHHHHHHHHH
Q 015042 160 TDVGRLVMQAAAASNLKQVSLELGGKSPLLIFDDADLDTAADVALLGNLYNKGEICVASSRVFVQEGIYDKFEKKLLEKA 239 (414)
Q Consensus 160 ~~~g~~i~~~~a~~~~~~~~~e~gg~~~~iV~~dadl~~aa~~i~~~~~~~~Gq~C~a~~~i~V~~~i~d~f~~~l~~~~ 239 (414)
+.+|+.|++.++ ++++|+++|+|||||+||++|+|++.|++.+++++|.++||.|+++++||||++++|+|+++|++++
T Consensus 207 ~~~g~~i~~~aa-~~~~~~~lElGG~~~~IV~~daDl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~~~f~~~l~~~~ 285 (455)
T cd07120 207 TATGRAIMAAAA-PTLKRLGLELGGKTPCIVFDDADLDAALPKLERALTIFAGQFCMAGSRVLVQRSIADEVRDRLAARL 285 (455)
T ss_pred HHHHHHHHHHHH-hcCCeEEEECCCCCeeEECCCCCHHHHHHHHHHHHHHhCCCCCCCCeEEEEcHHHHHHHHHHHHHHH
Confidence 999999999988 8899999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhcccCCCCCCCCcccccCCHHHHHHHHHHHHHHHHcCCEEEeCCcccC---CCCceeeeEEEeeCCCcccccccceecc
Q 015042 240 KAWLVGDPFDPTVRQGPQISERHFDRILSYIEHGKREGATLLTGGKPIG---DKGYYIEPTIFTNVKEDMIIAKEEIFGP 316 (414)
Q Consensus 240 ~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~---~~g~~~~Ptvl~~~~~~~~~~~~E~fgP 316 (414)
+++++|+|.++++++||++++.+++++++++++++++|+++++||...+ ..|+|++|||+.+++++|.+++||+|||
T Consensus 286 ~~l~~G~p~~~~~~~gpli~~~~~~~~~~~i~~a~~~ga~~~~~g~~~~~~~~~g~~~~Ptvl~~~~~d~~i~~~E~FgP 365 (455)
T cd07120 286 AAVKVGPGLDPASDMGPLIDRANVDRVDRMVERAIAAGAEVVLRGGPVTEGLAKGAFLRPTLLEVDDPDADIVQEEIFGP 365 (455)
T ss_pred HhcCcCCCCCCCCCcCCccCHHHHHHHHHHHHHHHHCCCEEEeCCccCcccCCCCceECCEEEecCCCCChhhhCcCcCc
Confidence 9999999999999999999999999999999999999999999876533 2689999999999999999999999999
Q ss_pred eEEEEeeCCHHHHHHHhhcCCCCceEEEecCCHHHHHHHHHhcceeEEEEcCcCCCCCCCCcccCCCCCCCccchHHHHH
Q 015042 317 VMALMKFKTVEEAIKSANNTQYGLAAGIVTKDLNVANTVSRSIRAGIIWINCYFGFSMDCPYGGYKMSGFGREYGLESLY 396 (414)
Q Consensus 317 vl~v~~~~~~~eai~~~n~~~~gl~~sv~s~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~p~gG~~~sG~g~~~g~~~~~ 396 (414)
|++|++|+|+||||+++|+++|||++||||+|.+.++++++++++|.|+||++....+.+||||+|+||+|+++|+++++
T Consensus 366 vl~v~~~~~~deai~~~n~~~~gLs~~ift~d~~~a~~~~~~l~~G~v~iN~~~~~~~~~pfGG~k~SG~G~~~g~~~l~ 445 (455)
T cd07120 366 VLTLETFDDEAEAVALANDTDYGLAASVWTRDLARAMRVARAIRAGTVWINDWNKLFAEAEEGGYRQSGLGRLHGVAALE 445 (455)
T ss_pred eEEEeecCCHHHHHHHHhCCCCCceEEEEcCCHHHHHHHHHhcCcceEEECCCCCCCCCCCcCCccccccCccchHHHHH
Confidence 99999999999999999999999999999999999999999999999999998877788999999999999999999999
Q ss_pred hhheeeEEEe
Q 015042 397 KYLQIKSVVT 406 (414)
Q Consensus 397 ~~~~~k~i~~ 406 (414)
+||++|+|++
T Consensus 446 ~ft~~k~v~~ 455 (455)
T cd07120 446 DFIEYKHIYL 455 (455)
T ss_pred HHhceeEEeC
Confidence 9999999853
|
Included in this CD is the aldehyde dehydrogenase (PsfA, locus ACA09737) of Pseudomonas putida involved in furoic acid metabolism. Transcription of psfA was induced in response to 2-furoic acid, furfuryl alcohol, and furfural. |
| >cd07559 ALDH_ACDHII_AcoD-like Ralstonia eutrophus NAD+-dependent acetaldehyde dehydrogenase II and Staphylococcus aureus AldA1 (SACOL0154)-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.1e-88 Score=687.52 Aligned_cols=405 Identities=48% Similarity=0.814 Sum_probs=382.9
Q ss_pred CHHHHHHHHHhHHHHHHHHHHhcCCChHHHhhchHHHHHHHHHHHHHhhhhhcCcccccCCCcccceeecCCceEEEEcC
Q 015042 1 MWKFADLIEEHVEELAALDALDAGKVYLRAKTAEIPGAAEFLRFFAGAADKIHGEVLKMSSELQGYTLREPVGVVGHIIP 80 (414)
Q Consensus 1 L~~~a~~l~~~~~~l~~~~~~etGk~~~e~~~~ei~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p 80 (414)
|+++++.|++|+++|++++++|+||+..++...|+..+++.+++++....+..+.......+...+.+++|+|||++|+|
T Consensus 66 L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~P~GVV~~I~P 145 (480)
T cd07559 66 LNKIADRIEENLELLAVAETLDNGKPIRETLAADIPLAIDHFRYFAGVIRAQEGSLSEIDEDTLSYHFHEPLGVVGQIIP 145 (480)
T ss_pred HHHHHHHHHHhHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCccccCCCCceeEEEEeccceEEEECC
Confidence 57899999999999999999999999998766799999999999998887665544333334567889999999999999
Q ss_pred CccchHHHHHhHHHHHhhCCeEEeecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhhHHHhhhCCCccEEEEeCCc
Q 015042 81 WNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLTALYYAHLAKLAGIPDGVLNVVPGFGPTAGAAICSHMDIDYVCFTGST 160 (414)
Q Consensus 81 ~n~P~~~~~~~~~~aLaaGN~vv~kps~~~~~~~~~l~~~l~~aG~p~g~v~~v~~~~~~~~~~l~~~~~v~~v~~tGs~ 160 (414)
||||+...++++++||++||+||+|||+.+|.++..+++++.++ +|+|++|++++++.+.++.|+.||++|.|.||||+
T Consensus 146 wN~P~~~~~~~i~~ALaaGN~VV~KPs~~tp~~~~~l~~l~~~~-lP~gvv~~v~g~~~~~~~~L~~~~~v~~V~fTGs~ 224 (480)
T cd07559 146 WNFPLLMAAWKLAPALAAGNTVVLKPASQTPLSILVLMELIGDL-LPKGVVNVVTGFGSEAGKPLASHPRIAKLAFTGST 224 (480)
T ss_pred CchHHHHHHHHHHHHHHcCCEEEEECchhhhHHHHHHHHHHHHh-CCcCeEEEEecCchHHHHHHhcCCCCCEEEEECcH
Confidence 99999999999999999999999999999999999999999996 99999999999777889999999999999999999
Q ss_pred HHHHHHHHHHHhcccceeEEEcCCCCCceEcCCC-----CHHHHHHHHHHHhhccCCCCcccCceEEEeCchHHHHHHHH
Q 015042 161 DVGRLVMQAAAASNLKQVSLELGGKSPLLIFDDA-----DLDTAADVALLGNLYNKGEICVASSRVFVQEGIYDKFEKKL 235 (414)
Q Consensus 161 ~~g~~i~~~~a~~~~~~~~~e~gg~~~~iV~~da-----dl~~aa~~i~~~~~~~~Gq~C~a~~~i~V~~~i~d~f~~~l 235 (414)
.+|+.|++.++ .+++|+++|+|||||+||++|| |++.|++.+++++|.|+||.|++++|||||++++|+|+++|
T Consensus 225 ~~g~~i~~~aa-~~~~p~~lElGGk~p~iV~~dA~~~~~Dl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~d~f~~~l 303 (480)
T cd07559 225 TVGRLIMQYAA-ENLIPVTLELGGKSPNIFFDDAMDADDDFDDKAEEGQLGFAFNQGEVCTCPSRALVQESIYDEFIERA 303 (480)
T ss_pred HHHHHHHHHHh-ccCCcEEeccCCCCeEEEcCCccccccCHHHHHHHHHHHHHhhCCCCCCCCeEEEEcHHHHHHHHHHH
Confidence 99999999988 8899999999999999999999 99999999999999999999999999999999999999999
Q ss_pred HHHHhhcccCCCCCCCCcccccCCHHHHHHHHHHHHHHHHcCCEEEeCCcccC----CCCceeeeEEEeeCCCccccccc
Q 015042 236 LEKAKAWLVGDPFDPTVRQGPQISERHFDRILSYIEHGKREGATLLTGGKPIG----DKGYYIEPTIFTNVKEDMIIAKE 311 (414)
Q Consensus 236 ~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~----~~g~~~~Ptvl~~~~~~~~~~~~ 311 (414)
+++++++++|+|.++++++||++++.+++++.+++++++++|+++++||.... ..|+|++|||+.+++++|.+++|
T Consensus 304 ~~~~~~l~~G~p~~~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~v~~gg~~~~~~~~~~g~~~~Ptvl~~~~~~~~~~~e 383 (480)
T cd07559 304 VERFEAIKVGNPLDPETMMGAQVSKDQLEKILSYVDIGKEEGAEVLTGGERLTLGGLDKGYFYEPTLIKGGNNDMRIFQE 383 (480)
T ss_pred HHHHHhCCCCCCCCCCCcCCCCcCHHHHHHHHHHHHHHHHCCCEEEeCCCcCccccCCCCcEECeEEEeCCCCCCcHHhc
Confidence 99999999999999999999999999999999999999999999999997643 36899999999999999999999
Q ss_pred ceecceEEEEeeCCHHHHHHHhhcCCCCceEEEecCCHHHHHHHHHhcceeEEEEcCcCCCCCCCCcccCCCCCCCccch
Q 015042 312 EIFGPVMALMKFKTVEEAIKSANNTQYGLAAGIVTKDLNVANTVSRSIRAGIIWINCYFGFSMDCPYGGYKMSGFGREYG 391 (414)
Q Consensus 312 E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~sv~s~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~p~gG~~~sG~g~~~g 391 (414)
|+||||++|++|+|++|||+++|+++|||++||||+|.+++.++++++++|+|+||++....+.+||||+|.||+|+++|
T Consensus 384 E~FgPvl~v~~~~~~~eai~~~n~~~~gL~~~v~t~d~~~a~~~a~~l~~G~v~iN~~~~~~~~~PfGG~k~SG~G~~~g 463 (480)
T cd07559 384 EIFGPVLAVITFKDEEEAIAIANDTEYGLGGGVWTRDINRALRVARGIQTGRVWVNCYHQYPAHAPFGGYKKSGIGRETH 463 (480)
T ss_pred CCcCceEEEEeeCCHHHHHHHHhCCCCCCeEEEECCCHHHHHHHHHhcCcceEEECCCCCCCCCCCcCCCccCcCCccCh
Confidence 99999999999999999999999999999999999999999999999999999999887777889999999999999999
Q ss_pred HHHHHhhheeeEEEee
Q 015042 392 LESLYKYLQIKSVVTP 407 (414)
Q Consensus 392 ~~~~~~~~~~k~i~~~ 407 (414)
++|+++||++|+|+++
T Consensus 464 ~~~~~~~~~~k~v~~~ 479 (480)
T cd07559 464 KMMLDHYQQTKNILVS 479 (480)
T ss_pred HHHHHHhhceEEEEEe
Confidence 9999999999999765
|
Included in this CD is the NAD+-dependent, acetaldehyde dehydrogenase II (AcDHII, AcoD, EC=1.2.1.3) from Ralstonia (Alcaligenes) eutrophus H16 involved in the catabolism of acetoin and ethanol, and similar proteins, such as, the dimeric dihydrolipoamide dehydrogenase of the acetoin dehydrogenase enzyme system of Klebsiella pneumonia. Also included are sequences similar to the NAD+-dependent chloroacetaldehyde dehydrogenases (AldA and AldB) of Xanthobacter autotrophicus GJ10 which are involved in the degradation of 1,2-dichloroethane, as well as, the uncharacterized aldehyde dehydrogenase from Staphylococcus aureus (AldA1, locus SACOL0154) and other similar sequences. |
| >PLN02467 betaine aldehyde dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.4e-88 Score=686.63 Aligned_cols=407 Identities=44% Similarity=0.770 Sum_probs=383.0
Q ss_pred CHHHHHHHHHhHHHHHHHHHHhcCCChHHHhhchHHHHHHHHHHHHHhhhhhcCccc---ccC-CCcccceeecCCceEE
Q 015042 1 MWKFADLIEEHVEELAALDALDAGKVYLRAKTAEIPGAAEFLRFFAGAADKIHGEVL---KMS-SELQGYTLREPVGVVG 76 (414)
Q Consensus 1 L~~~a~~l~~~~~~l~~~~~~etGk~~~e~~~~ei~~~~~~l~~~a~~~~~~~~~~~---~~~-~~~~~~~~~~P~Gvv~ 76 (414)
|+++++.|++|+++|++++++|+|||..++. .|+..+++.+++++.+++++.+... ... .+...+++++|+|||+
T Consensus 78 L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a~-~ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~ 156 (503)
T PLN02467 78 LRAIAAKITERKSELAKLETLDCGKPLDEAA-WDMDDVAGCFEYYADLAEALDAKQKAPVSLPMETFKGYVLKEPLGVVG 156 (503)
T ss_pred HHHHHHHHHHhHHHHHHHHHHHcCCCHHHHH-HHHHHHHHHHHHHHHHHHHhcCccccccCCCCCCceeEEEEecCceEE
Confidence 5789999999999999999999999999865 5999999999999998877655431 111 1334688999999999
Q ss_pred EEcCCccchHHHHHhHHHHHhhCCeEEeecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhhHHHhhhCCCccEEEE
Q 015042 77 HIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLTALYYAHLAKLAGIPDGVLNVVPGFGPTAGAAICSHMDIDYVCF 156 (414)
Q Consensus 77 ~i~p~n~P~~~~~~~~~~aLaaGN~vv~kps~~~~~~~~~l~~~l~~aG~p~g~v~~v~~~~~~~~~~l~~~~~v~~v~~ 156 (414)
+|+|||||+...++++++||++||+||+|||+.+|.++..+++++.++|+|+|+++++++++.+.++.|+.||++|.|.|
T Consensus 157 ~I~PwN~P~~~~~~~i~~ALaaGN~Vv~Kps~~tp~~~~~l~~~~~eag~P~gvv~~v~g~~~~~~~~L~~~~~v~~v~f 236 (503)
T PLN02467 157 LITPWNYPLLMATWKVAPALAAGCTAVLKPSELASVTCLELADICREVGLPPGVLNVVTGLGTEAGAPLASHPGVDKIAF 236 (503)
T ss_pred EECCCChHHHHHHHHHHHHHHcCCEEEEECCCcCcHHHHHHHHHHHHcCcCcCeEEEEeCCchhHHHHHhcCCCCCEEEE
Confidence 99999999999999999999999999999999999999999999999999999999999977788999999999999999
Q ss_pred eCCcHHHHHHHHHHHhcccceeEEEcCCCCCceEcCCCCHHHHHHHHHHHhhccCCCCcccCceEEEeCchHHHHHHHHH
Q 015042 157 TGSTDVGRLVMQAAAASNLKQVSLELGGKSPLLIFDDADLDTAADVALLGNLYNKGEICVASSRVFVQEGIYDKFEKKLL 236 (414)
Q Consensus 157 tGs~~~g~~i~~~~a~~~~~~~~~e~gg~~~~iV~~dadl~~aa~~i~~~~~~~~Gq~C~a~~~i~V~~~i~d~f~~~l~ 236 (414)
|||+.+|+.|.+.++ .+++|+++|+|||||+||++|||++.|++.+++++|.|+||.|+++++||||++++|+|+++|+
T Consensus 237 TGs~~~g~~v~~~aa-~~~~~~~lElGG~~~~iV~~dADl~~A~~~i~~~~f~~~GQ~C~a~~rv~V~~~i~d~f~~~l~ 315 (503)
T PLN02467 237 TGSTATGRKIMTAAA-QMVKPVSLELGGKSPIIVFDDVDLDKAVEWAMFGCFWTNGQICSATSRLLVHERIASEFLEKLV 315 (503)
T ss_pred ECCHHHHHHHHHHHh-ccCCcEEEECCCCCceEECCCCCHHHHHHHHHHHHHhhcCCCCCCCcEEEEcHHHHHHHHHHHH
Confidence 999999999999988 8899999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhhcccCCCCCCCCcccccCCHHHHHHHHHHHHHHHHcCCEEEeCCcccC--CCCceeeeEEEeeCCCccccccccee
Q 015042 237 EKAKAWLVGDPFDPTVRQGPQISERHFDRILSYIEHGKREGATLLTGGKPIG--DKGYYIEPTIFTNVKEDMIIAKEEIF 314 (414)
Q Consensus 237 ~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~--~~g~~~~Ptvl~~~~~~~~~~~~E~f 314 (414)
++++++++|+|.++++++||+++..+++++.+++++++.+|+++++||.... ..|+|++|||+.+++++|.+++||+|
T Consensus 316 ~~~~~l~~g~p~~~~~~~Gpli~~~~~~~v~~~v~~a~~~Ga~vl~gG~~~~~~~~g~~~~Ptvl~~v~~~~~i~~eE~F 395 (503)
T PLN02467 316 KWAKNIKISDPLEEGCRLGPVVSEGQYEKVLKFISTAKSEGATILCGGKRPEHLKKGFFIEPTIITDVTTSMQIWREEVF 395 (503)
T ss_pred HHHHhcCCCCCCCCCCCcCCCCCHHHHHHHHHHHHHHHHCCCEEEeCCCCCCCCCCCeEEeeEEEeCCCCCChHhhCCCC
Confidence 9999999999999999999999999999999999999999999999997642 35899999999999999999999999
Q ss_pred cceEEEEeeCCHHHHHHHhhcCCCCceEEEecCCHHHHHHHHHhcceeEEEEcCcCCCCCCCCcccCCCCCCCccchHHH
Q 015042 315 GPVMALMKFKTVEEAIKSANNTQYGLAAGIVTKDLNVANTVSRSIRAGIIWINCYFGFSMDCPYGGYKMSGFGREYGLES 394 (414)
Q Consensus 315 gPvl~v~~~~~~~eai~~~n~~~~gl~~sv~s~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~p~gG~~~sG~g~~~g~~~ 394 (414)
|||++|++|+|.+|||+++|+++|||+++|||+|.+.++++++++++|.|+||++......+||||+|.||+|+++|++|
T Consensus 396 gPvl~v~~~~~~~eAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~~G~v~iN~~~~~~~~~PfGG~k~SG~G~~~G~~~ 475 (503)
T PLN02467 396 GPVLCVKTFSTEDEAIELANDSHYGLAGAVISNDLERCERVSEAFQAGIVWINCSQPCFCQAPWGGIKRSGFGRELGEWG 475 (503)
T ss_pred CceEEEEeeCCHHHHHHHHhCCCCCceEEEECCCHHHHHHHHHhCCcceEEECCCCCCCCCCCcCCcccCcCCCcchHHH
Confidence 99999999999999999999999999999999999999999999999999999987666789999999999999999999
Q ss_pred HHhhheeeEEEeeCC
Q 015042 395 LYKYLQIKSVVTPIY 409 (414)
Q Consensus 395 ~~~~~~~k~i~~~~~ 409 (414)
+++||+.|+|+....
T Consensus 476 l~~ft~~k~i~~~~~ 490 (503)
T PLN02467 476 LENYLSVKQVTKYIS 490 (503)
T ss_pred HHHhhCeEEEEEecC
Confidence 999999999988653
|
|
| >cd07100 ALDH_SSADH1_GabD1 Mycobacterium tuberculosis succinate-semialdehyde dehydrogenase 1-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.5e-88 Score=676.54 Aligned_cols=401 Identities=38% Similarity=0.596 Sum_probs=378.5
Q ss_pred CHHHHHHHHHhHHHHHHHHHHhcCCChHHHhhchHHHHHHHHHHHHHhhhhhcCc-ccccCCCcccceeecCCceEEEEc
Q 015042 1 MWKFADLIEEHVEELAALDALDAGKVYLRAKTAEIPGAAEFLRFFAGAADKIHGE-VLKMSSELQGYTLREPVGVVGHII 79 (414)
Q Consensus 1 L~~~a~~l~~~~~~l~~~~~~etGk~~~e~~~~ei~~~~~~l~~~a~~~~~~~~~-~~~~~~~~~~~~~~~P~Gvv~~i~ 79 (414)
|+++++.|++++++|++++++|+|||..++. .|+..+++.+++++..+++.... ..+. .+...+.+++|+|||++|+
T Consensus 27 L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~-~ev~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~P~GvV~~I~ 104 (429)
T cd07100 27 LRKLADLLRERKDELARLITLEMGKPIAEAR-AEVEKCAWICRYYAENAEAFLADEPIET-DAGKAYVRYEPLGVVLGIM 104 (429)
T ss_pred HHHHHHHHHhHHHHHHHHHHHHcCCCHHHHH-HHHHHHHHHHHHHHHHHHHhcCCeeccC-CCceEEEEEEeeeEEEEEc
Confidence 5789999999999999999999999999864 69999999999999888766432 2222 2445778999999999999
Q ss_pred CCccchHHHHHhHHHHHhhCCeEEeecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhhHHHhhhCCCccEEEEeCC
Q 015042 80 PWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLTALYYAHLAKLAGIPDGVLNVVPGFGPTAGAAICSHMDIDYVCFTGS 159 (414)
Q Consensus 80 p~n~P~~~~~~~~~~aLaaGN~vv~kps~~~~~~~~~l~~~l~~aG~p~g~v~~v~~~~~~~~~~l~~~~~v~~v~~tGs 159 (414)
|||||+..+++++++||++||+||+|||+.+|+++..+.++|.++|+|+|+++++++++ +.+..|+.|++++.|.||||
T Consensus 105 P~N~Pl~~~~~~~~~ALaaGN~VV~Kps~~~p~~~~~l~~~l~~aglP~gvv~~v~g~~-~~~~~l~~~~~i~~v~fTGs 183 (429)
T cd07100 105 PWNFPFWQVFRFAAPNLMAGNTVLLKHASNVPGCALAIEELFREAGFPEGVFQNLLIDS-DQVEAIIADPRVRGVTLTGS 183 (429)
T ss_pred CCchHHHHHHHHHHHHHHcCCEEEEECCCcchHHHHHHHHHHHHcCCCcCcEEEEeCCc-hhHHHHhcCCCCCEEEEECc
Confidence 99999999999999999999999999999999999999999999999999999999854 56789999999999999999
Q ss_pred cHHHHHHHHHHHhcccceeEEEcCCCCCceEcCCCCHHHHHHHHHHHhhccCCCCcccCceEEEeCchHHHHHHHHHHHH
Q 015042 160 TDVGRLVMQAAAASNLKQVSLELGGKSPLLIFDDADLDTAADVALLGNLYNKGEICVASSRVFVQEGIYDKFEKKLLEKA 239 (414)
Q Consensus 160 ~~~g~~i~~~~a~~~~~~~~~e~gg~~~~iV~~dadl~~aa~~i~~~~~~~~Gq~C~a~~~i~V~~~i~d~f~~~l~~~~ 239 (414)
+.+|+.|++.++ ++++|+++|+|||||+||++|||++.|++.+++++|.|+||.|+++++||||+++||+|+++|++++
T Consensus 184 ~~~g~~i~~~aa-~~~~~~~lelgG~~p~iV~~daDl~~aa~~i~~~~~~~~GQ~C~a~~rv~v~~~i~~~f~~~l~~~~ 262 (429)
T cd07100 184 ERAGRAVAAEAG-KNLKKSVLELGGSDPFIVLDDADLDKAVKTAVKGRLQNAGQSCIAAKRFIVHEDVYDEFLEKFVEAM 262 (429)
T ss_pred HHHHHHHHHHHh-hcCcceEEecCCCCeeEECCCCCHHHHHHHHHHHHHhccCCCCCCCeEEEEcHHHHHHHHHHHHHHH
Confidence 999999999988 8899999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhcccCCCCCCCCcccccCCHHHHHHHHHHHHHHHHcCCEEEeCCcccCCCCceeeeEEEeeCCCcccccccceecceEE
Q 015042 240 KAWLVGDPFDPTVRQGPQISERHFDRILSYIEHGKREGATLLTGGKPIGDKGYYIEPTIFTNVKEDMIIAKEEIFGPVMA 319 (414)
Q Consensus 240 ~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~ 319 (414)
+++++|+|+++++++||++++.+++++++++++++++|+++++||......|+|++|||+.+++++|.+++||+||||++
T Consensus 263 ~~~~~g~p~~~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~~~~gg~~~~~~g~~~~Ptv~~~~~~~~~~~~eE~fgPvl~ 342 (429)
T cd07100 263 AALKVGDPMDEDTDLGPLARKDLRDELHEQVEEAVAAGATLLLGGKRPDGPGAFYPPTVLTDVTPGMPAYDEELFGPVAA 342 (429)
T ss_pred HhccCCCCccCCCCccCCCCHHHHHHHHHHHHHHHHCCCEEEeCCCcCCCCCeEEcCEEeecCCCCCHHHhCCCCCCeEE
Confidence 99999999999999999999999999999999999999999999976544689999999999999999999999999999
Q ss_pred EEeeCCHHHHHHHhhcCCCCceEEEecCCHHHHHHHHHhcceeEEEEcCcCCCCCCCCcccCCCCCCCccchHHHHHhhh
Q 015042 320 LMKFKTVEEAIKSANNTQYGLAAGIVTKDLNVANTVSRSIRAGIIWINCYFGFSMDCPYGGYKMSGFGREYGLESLYKYL 399 (414)
Q Consensus 320 v~~~~~~~eai~~~n~~~~gl~~sv~s~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~p~gG~~~sG~g~~~g~~~~~~~~ 399 (414)
|++|+|.+|||+++|+++|||++||||+|.+.++++++++++|.|+||++....+.+||||+|.||+|+++|++++++||
T Consensus 343 v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~pfGG~~~SG~G~~~g~~~l~~~~ 422 (429)
T cd07100 343 VIKVKDEEEAIALANDSPFGLGGSVFTTDLERAERVARRLEAGMVFINGMVKSDPRLPFGGVKRSGYGRELGRFGIREFV 422 (429)
T ss_pred EeeeCCHHHHHHHHhCCCcCceEEEECCCHHHHHHHHHhCCcCeEEECCCCCCCCCCCcCCccccccCCcchHHHHHHhc
Confidence 99999999999999999999999999999999999999999999999998877788999999999999999999999999
Q ss_pred eeeEEE
Q 015042 400 QIKSVV 405 (414)
Q Consensus 400 ~~k~i~ 405 (414)
+.|+|+
T Consensus 423 ~~k~v~ 428 (429)
T cd07100 423 NIKTVW 428 (429)
T ss_pred ceeEEe
Confidence 999985
|
Succinate-semialdehyde dehydrogenase 1 (SSADH1, GabD1, EC=1.2.1.16) catalyzes the NADP(+)-dependent oxidation of succinate semialdehyde (SSA) to succinate. SSADH activity in Mycobacterium tuberculosis (Mtb) is encoded by both gabD1 (Rv0234c) and gabD2 (Rv1731). The Mtb GabD1 SSADH1 reportedly is an enzyme of the gamma-aminobutyrate shunt, which forms a functional link between two TCA half-cycles by converting alpha-ketoglutarate to succinate. |
| >cd07115 ALDH_HMSADH_HapE Pseudomonas fluorescens 4-hydroxymuconic semialdehyde dehydrogenase-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-87 Score=680.92 Aligned_cols=406 Identities=52% Similarity=0.906 Sum_probs=385.1
Q ss_pred CHHHHHHHHHhHHHHHHHHHHhcCCChHHHhhchHHHHHHHHHHHHHhhhhhcCcccccCCCcccceeecCCceEEEEcC
Q 015042 1 MWKFADLIEEHVEELAALDALDAGKVYLRAKTAEIPGAAEFLRFFAGAADKIHGEVLKMSSELQGYTLREPVGVVGHIIP 80 (414)
Q Consensus 1 L~~~a~~l~~~~~~l~~~~~~etGk~~~e~~~~ei~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p 80 (414)
|+++++.|++|+++|++++++|+|||..++...|+..+++.+++++.+.++..+...+...+...+.+++|+|||++|+|
T Consensus 47 l~~~a~~l~~~~~~la~~~~~e~Gk~~~~~~~~ev~~~i~~l~~~~~~~~~~~g~~~~~~~~~~~~~~~~P~Gvv~~i~p 126 (453)
T cd07115 47 LWRLAELILANADELARLESLDTGKPIRAARRLDVPRAADTFRYYAGWADKIEGEVIPVRGPFLNYTVREPVGVVGAIVP 126 (453)
T ss_pred HHHHHHHHHHhHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCceecCCCCceEEEEecceeEEEEEcC
Confidence 57899999999999999999999999998765699999999999999887765554443345567899999999999999
Q ss_pred CccchHHHHHhHHHHHhhCCeEEeecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhhHHHhhhCCCccEEEEeCCc
Q 015042 81 WNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLTALYYAHLAKLAGIPDGVLNVVPGFGPTAGAAICSHMDIDYVCFTGST 160 (414)
Q Consensus 81 ~n~P~~~~~~~~~~aLaaGN~vv~kps~~~~~~~~~l~~~l~~aG~p~g~v~~v~~~~~~~~~~l~~~~~v~~v~~tGs~ 160 (414)
||||+...++++++||++||+||+|||+.+|.++..+.+++.++|+|+++++++++++.+.++.|+.||++|.|.||||.
T Consensus 127 ~N~P~~~~~~~~~~ALaaGN~Vi~Kps~~~p~~~~~l~~~~~~aGlP~~~~~~v~g~~~~~~~~l~~~~~id~v~fTGs~ 206 (453)
T cd07115 127 WNFPLMFAAWKVAPALAAGNTVVLKPAELTPLSALRIAELMAEAGFPAGVLNVVTGFGEVAGAALVEHPDVDKITFTGST 206 (453)
T ss_pred CCCHHHHHHHHHHHHHhcCCEEEEECCCCCcHHHHHHHHHHHhcCcCchheEEEecCchhHHHHHhcCCCCCEEEEECcH
Confidence 99999999999999999999999999999999999999999999999999999999777788999999999999999999
Q ss_pred HHHHHHHHHHHhcccceeEEEcCCCCCceEcCCCCHHHHHHHHHHHhhccCCCCcccCceEEEeCchHHHHHHHHHHHHh
Q 015042 161 DVGRLVMQAAAASNLKQVSLELGGKSPLLIFDDADLDTAADVALLGNLYNKGEICVASSRVFVQEGIYDKFEKKLLEKAK 240 (414)
Q Consensus 161 ~~g~~i~~~~a~~~~~~~~~e~gg~~~~iV~~dadl~~aa~~i~~~~~~~~Gq~C~a~~~i~V~~~i~d~f~~~l~~~~~ 240 (414)
.+|+.|++.++ .+++|+++|+||+||+||++|||++.|++.+++++|.|+||.|+++++||||++++|+|+++|+++++
T Consensus 207 ~~g~~v~~~aa-~~~~~~~lElgG~~p~iV~~dAdl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~l~~~~~ 285 (453)
T cd07115 207 AVGRKIMQGAA-GNLKRVSLELGGKSANIVFADADLDAAVRAAATGIFYNQGQMCTAGSRLLVHESIYDEFLERFTSLAR 285 (453)
T ss_pred HHHHHHHHHHh-hcCCeEEEecCCCCceEECCCCCHHHHHHHHHHHHHhccCCCCCCCeEEEEcHHHHHHHHHHHHHHHh
Confidence 99999999988 78999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hcccCCCCCCCCcccccCCHHHHHHHHHHHHHHHHcCCEEEeCCcccCCCCceeeeEEEeeCCCcccccccceecceEEE
Q 015042 241 AWLVGDPFDPTVRQGPQISERHFDRILSYIEHGKREGATLLTGGKPIGDKGYYIEPTIFTNVKEDMIIAKEEIFGPVMAL 320 (414)
Q Consensus 241 ~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v 320 (414)
++++|+|.++++++||++++.+++++.+++++++++|+++++||......|+|++|||+.++++++.+++||+||||++|
T Consensus 286 ~~~~g~p~~~~~~~gpli~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v 365 (453)
T cd07115 286 SLRPGDPLDPKTQMGPLVSQAQFDRVLDYVDVGREEGARLLTGGKRPGARGFFVEPTIFAAVPPEMRIAQEEIFGPVVSV 365 (453)
T ss_pred cCCcCCCCCCCCCCCCCcCHHHHHHHHHHHHHHHHCCCEEEeCCCCCCCCCceECCEEEecCCCCChHhhCCCcCceEEE
Confidence 99999999999999999999999999999999999999999999765446899999999999999999999999999999
Q ss_pred EeeCCHHHHHHHhhcCCCCceEEEecCCHHHHHHHHHhcceeEEEEcCcCCCCCCCCcccCCCCCCCccchHHHHHhhhe
Q 015042 321 MKFKTVEEAIKSANNTQYGLAAGIVTKDLNVANTVSRSIRAGIIWINCYFGFSMDCPYGGYKMSGFGREYGLESLYKYLQ 400 (414)
Q Consensus 321 ~~~~~~~eai~~~n~~~~gl~~sv~s~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~p~gG~~~sG~g~~~g~~~~~~~~~ 400 (414)
++|+|.||||+++|+++|||++||||+|.+.++++++++++|+|+||++....+.+||||.|.||+|+++|++|+++|++
T Consensus 366 ~~~~~~~eai~~~n~~~~gL~~~ifs~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~pfGG~~~SG~G~~~g~~~~~~f~~ 445 (453)
T cd07115 366 MRFRDEEEALRIANGTEYGLAAGVWTRDLGRAHRVAAALKAGTVWINTYNRFDPGSPFGGYKQSGFGREMGREALDEYTE 445 (453)
T ss_pred EeeCCHHHHHHHHhCCCCCCeEEEECCCHHHHHHHHHhcCccEEEECCCCCCCCCCCCCCcccccCCcCchHHHHHHhhc
Confidence 99999999999999999999999999999999999999999999999988788889999999999999999999999999
Q ss_pred eeEEEee
Q 015042 401 IKSVVTP 407 (414)
Q Consensus 401 ~k~i~~~ 407 (414)
.|+|.++
T Consensus 446 ~k~~~~~ 452 (453)
T cd07115 446 VKSVWVN 452 (453)
T ss_pred eEEEEEe
Confidence 9999765
|
4-hydroxymuconic semialdehyde dehydrogenase (HapE, EC=1.2.1.61) of Pseudomonas fluorescens ACB involved in 4-hydroxyacetophenone degradation, and putative hydroxycaproate semialdehyde dehydrogenase (ChnE) of Brachymonas petroleovorans involved in cyclohexane metabolism, and other similar sequences, are present in this CD. |
| >cd07091 ALDH_F1-2_Ald2-like ALDH subfamily: ALDH families 1and 2, including 10-formyltetrahydrofolate dehydrogenase, NAD+-dependent retinal dehydrogenase 1 and related proteins | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-87 Score=684.93 Aligned_cols=406 Identities=58% Similarity=0.979 Sum_probs=384.1
Q ss_pred CHHHHHHHHHhHHHHHHHHHHhcCCChHHHhhchHHHHHHHHHHHHHhhhhhcCcccccCCCcccceeecCCceEEEEcC
Q 015042 1 MWKFADLIEEHVEELAALDALDAGKVYLRAKTAEIPGAAEFLRFFAGAADKIHGEVLKMSSELQGYTLREPVGVVGHIIP 80 (414)
Q Consensus 1 L~~~a~~l~~~~~~l~~~~~~etGk~~~e~~~~ei~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p 80 (414)
|+++++.|.+++++|++++++|+|||..++...|+..+++.+++++.+.++..+...+...+...+.+++|+|||++|+|
T Consensus 71 L~~~a~~l~~~~~~la~~~~~e~Gk~~~~~~~~ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p 150 (476)
T cd07091 71 LNKLADLIERDRDELAALESLDNGKPLEESAKGDVALSIKCLRYYAGWADKIQGKTIPIDGNFLAYTRREPIGVCGQIIP 150 (476)
T ss_pred HHHHHHHHHHhHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCccccCCCCceEEEEEeceeEEEEECC
Confidence 57899999999999999999999999876666799999999999998887665554443345567889999999999999
Q ss_pred CccchHHHHHhHHHHHhhCCeEEeecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhhHHHhhhCCCccEEEEeCCc
Q 015042 81 WNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLTALYYAHLAKLAGIPDGVLNVVPGFGPTAGAAICSHMDIDYVCFTGST 160 (414)
Q Consensus 81 ~n~P~~~~~~~~~~aLaaGN~vv~kps~~~~~~~~~l~~~l~~aG~p~g~v~~v~~~~~~~~~~l~~~~~v~~v~~tGs~ 160 (414)
||||+...++++++||++||+||+|||+.+|.++..+.++|.++|+|+|+++++++++.+.++.|..|+++|.|.||||+
T Consensus 151 ~N~P~~~~~~~~~~AL~aGN~VvlKps~~~p~~~~~l~~~~~~aglP~g~~~~v~g~~~~~~~~L~~~~~vd~V~fTGs~ 230 (476)
T cd07091 151 WNFPLLMLAWKLAPALAAGNTVVLKPAEQTPLSALYLAELIKEAGFPPGVVNIVPGFGPTAGAAISSHMDVDKIAFTGST 230 (476)
T ss_pred CcCHHHHHHHHHHHHHHcCCEEEEeCCCCChHHHHHHHHHHHHcCcCCCcEEEEeCCChhHHHHHhcCCCcCEEEEECcH
Confidence 99999999999999999999999999999999999999999999999999999999777888999999999999999999
Q ss_pred HHHHHHHHHHHhcccceeEEEcCCCCCceEcCCCCHHHHHHHHHHHhhccCCCCcccCceEEEeCchHHHHHHHHHHHHh
Q 015042 161 DVGRLVMQAAAASNLKQVSLELGGKSPLLIFDDADLDTAADVALLGNLYNKGEICVASSRVFVQEGIYDKFEKKLLEKAK 240 (414)
Q Consensus 161 ~~g~~i~~~~a~~~~~~~~~e~gg~~~~iV~~dadl~~aa~~i~~~~~~~~Gq~C~a~~~i~V~~~i~d~f~~~l~~~~~ 240 (414)
.+|+.|.+.++..+++|+++|+|||||+||++|||++.|++.+++++|.++||.|+++++||||++++|+|+++|+++++
T Consensus 231 ~~g~~v~~~aa~~~~~~~~lElgG~~~~iV~~dADl~~Aa~~i~~~~~~~~GQ~C~a~~rv~V~~~v~~~f~~~L~~~~~ 310 (476)
T cd07091 231 AVGRTIMEAAAKSNLKKVTLELGGKSPNIVFDDADLDKAVEWAAFGIFFNQGQCCCAGSRIFVQESIYDEFVEKFKARAE 310 (476)
T ss_pred HHHHHHHHHHHhcCCceEEEecCCCCeEEECCCCCHHHHHHHHHHHHHhccCCCCcCCcEEEEeHHHHHHHHHHHHHHHh
Confidence 99999999888338899999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hcccCCCCCCCCcccccCCHHHHHHHHHHHHHHHHcCCEEEeCCcccCCCCceeeeEEEeeCCCcccccccceecceEEE
Q 015042 241 AWLVGDPFDPTVRQGPQISERHFDRILSYIEHGKREGATLLTGGKPIGDKGYYIEPTIFTNVKEDMIIAKEEIFGPVMAL 320 (414)
Q Consensus 241 ~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v 320 (414)
++++|+|.++++++||+++..+++++.+++++++.+|+++++||....+.|+|++|||+.++++++.+++||+||||++|
T Consensus 311 ~~~~g~p~~~~~~~gpli~~~~~~~v~~~i~~a~~~ga~vl~gg~~~~~~~~~~~Ptvl~~v~~~~~~~~eE~FgPvl~v 390 (476)
T cd07091 311 KRVVGDPFDPDTFQGPQVSKAQFDKILSYIESGKKEGATLLTGGERHGSKGYFIQPTVFTDVKDDMKIAKEEIFGPVVTI 390 (476)
T ss_pred hCCCCCCCCCCCcCCCCcCHHHHHHHHHHHHHHHHCCCEEEeCCCCCCCCCceECcEEecCCCCCChhhhCCCCCCeEEE
Confidence 99999999999999999999999999999999999999999999876557899999999999999999999999999999
Q ss_pred EeeCCHHHHHHHhhcCCCCceEEEecCCHHHHHHHHHhcceeEEEEcCcCCCCCCCCcccCCCCCCCccchHHHHHhhhe
Q 015042 321 MKFKTVEEAIKSANNTQYGLAAGIVTKDLNVANTVSRSIRAGIIWINCYFGFSMDCPYGGYKMSGFGREYGLESLYKYLQ 400 (414)
Q Consensus 321 ~~~~~~~eai~~~n~~~~gl~~sv~s~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~p~gG~~~sG~g~~~g~~~~~~~~~ 400 (414)
++|+|++||++++|++++||++||||+|.+.++++++++++|+|+||++....+.+||||+|.||+|+++|++|+++||+
T Consensus 391 ~~~~~~~eai~~~n~~~~gLsa~v~t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~pfgG~k~SG~G~~~g~~~~~~f~~ 470 (476)
T cd07091 391 LKFKTEDEVIERANDTEYGLAAGVFTKDINKALRVSRALKAGTVWVNTYNVFDAAVPFGGFKQSGFGRELGEEGLEEYTQ 470 (476)
T ss_pred eecCCHHHHHHHHhCCCCCceEEEECCCHHHHHHHHHhcCcceEEECCCCCCCCCCCcCCcccCcCCccchHHHHHHhhc
Confidence 99999999999999999999999999999999999999999999999988777889999999999999999999999999
Q ss_pred eeEEEe
Q 015042 401 IKSVVT 406 (414)
Q Consensus 401 ~k~i~~ 406 (414)
+|+|++
T Consensus 471 ~k~~~~ 476 (476)
T cd07091 471 VKAVTI 476 (476)
T ss_pred eeEEeC
Confidence 999853
|
ALDH subfamily which includes the NAD+-dependent retinal dehydrogenase 1 (RALDH 1, ALDH1, EC=1.2.1.36), also known as aldehyde dehydrogenase family 1 member A1 (ALDH1A1), in humans, a homotetrameric, cytosolic enzyme that catalyzes the oxidation of retinaldehyde to retinoic acid. Human ALDH1B1 and ALDH2 are also in this cluster; both are mitochrondrial homotetramers which play important roles in acetaldehyde oxidation; ALDH1B1 in response to UV light exposure and ALDH2 during ethanol metabolism. 10-formyltetrahydrofolate dehydrogenase (FTHFDH, EC=1.5.1.6), also known as aldehyde dehydrogenase family 1 member L1 (ALDH1L1), in humans, a multi-domain homotetramer with an N-terminal formyl transferase domain and a C-terminal ALDH domain. FTHFDH catalyzes an NADP+-dependent dehydrogenase reaction resulting in the co |
| >PLN02315 aldehyde dehydrogenase family 7 member | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-87 Score=683.67 Aligned_cols=404 Identities=29% Similarity=0.489 Sum_probs=376.6
Q ss_pred CHHHHHHHHHhHHHHHHHHHHhcCCChHHHhhchHHHHHHHHHHHHHhhhhhcCcccccC-CCcccceeecCCceEEEEc
Q 015042 1 MWKFADLIEEHVEELAALDALDAGKVYLRAKTAEIPGAAEFLRFFAGAADKIHGEVLKMS-SELQGYTLREPVGVVGHII 79 (414)
Q Consensus 1 L~~~a~~l~~~~~~l~~~~~~etGk~~~e~~~~ei~~~~~~l~~~a~~~~~~~~~~~~~~-~~~~~~~~~~P~Gvv~~i~ 79 (414)
|+++++.|++|+++|++++++|+|||..++ ..|+..+++.++|++..++++.+...+.. .+...+..++|+|||++|+
T Consensus 84 L~~~a~~l~~~~~~la~~~~~e~GK~~~~a-~~ev~~~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~P~GVV~~I~ 162 (508)
T PLN02315 84 VRQIGDALRAKLDYLGRLVSLEMGKILAEG-IGEVQEIIDMCDFAVGLSRQLNGSIIPSERPNHMMMEVWNPLGIVGVIT 162 (508)
T ss_pred HHHHHHHHHhHHHHHHHHHHHHcCCCHHHH-HHHHHHHHHHHHHHHHHHHHhcCccccCCCCCceeEEEEecceEEEEEC
Confidence 578999999999999999999999999986 46999999999999988776655433322 2344567899999999999
Q ss_pred CCccchHHHHHhHHHHHhhCCeEEeecCCCChHHHHH----HHHHHHHcCCCCCcEEEEeCCchhhHHHhhhCCCccEEE
Q 015042 80 PWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLTALY----YAHLAKLAGIPDGVLNVVPGFGPTAGAAICSHMDIDYVC 155 (414)
Q Consensus 80 p~n~P~~~~~~~~~~aLaaGN~vv~kps~~~~~~~~~----l~~~l~~aG~p~g~v~~v~~~~~~~~~~l~~~~~v~~v~ 155 (414)
|||||+..+++++++||++||+||+|||+.+|.++.. +.+++.++|+|+|++|++++ +.+.++.|+.||++|.|.
T Consensus 163 PwN~P~~~~~~~~~~ALaaGN~VVlKPs~~tp~~~~~~~~l~~~~~~~aGlP~gvv~~v~g-~~~~~~~l~~~~~v~~v~ 241 (508)
T PLN02315 163 AFNFPCAVLGWNACIALVCGNCVVWKGAPTTPLITIAMTKLVAEVLEKNNLPGAIFTSFCG-GAEIGEAIAKDTRIPLVS 241 (508)
T ss_pred CCcchHHHHHHHHhHHHHcCCEEEeeCCCcChHHHHHHHHHHHHHHHHcCCCcccEEEecC-ChHHHHHHhcCCCCCEEE
Confidence 9999999999999999999999999999999999887 67788999999999999998 777899999999999999
Q ss_pred EeCCcHHHHHHHHHHHhcccceeEEEcCCCCCceEcCCCCHHHHHHHHHHHhhccCCCCcccCceEEEeCchHHHHHHHH
Q 015042 156 FTGSTDVGRLVMQAAAASNLKQVSLELGGKSPLLIFDDADLDTAADVALLGNLYNKGEICVASSRVFVQEGIYDKFEKKL 235 (414)
Q Consensus 156 ~tGs~~~g~~i~~~~a~~~~~~~~~e~gg~~~~iV~~dadl~~aa~~i~~~~~~~~Gq~C~a~~~i~V~~~i~d~f~~~l 235 (414)
||||+.+|+.|++.++ ++++|+++|+|||||+||++|||++.|++.+++++|.|+||.|+++++||||+++||+|+++|
T Consensus 242 fTGS~~~G~~v~~~aa-~~~~~~~lElgGknp~iV~~dADl~~Aa~~i~~~~f~~~GQ~C~a~~rv~V~~~i~d~f~~~l 320 (508)
T PLN02315 242 FTGSSKVGLMVQQTVN-ARFGKCLLELSGNNAIIVMDDADIQLAVRSVLFAAVGTAGQRCTTCRRLLLHESIYDDVLEQL 320 (508)
T ss_pred EECCHHHHHHHHHHHH-hcCCCEEEecCCCCeEEECCCCCHHHHHHHHHHHHHHhcCCCCCCCeEEEEeHHHHHHHHHHH
Confidence 9999999999999887 788999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhhcccCCCCCCCCcccccCCHHHHHHHHHHHHHHHHcCCEEEeCCcccCCCCceeeeEEEeeCCCcccccccceec
Q 015042 236 LEKAKAWLVGDPFDPTVRQGPQISERHFDRILSYIEHGKREGATLLTGGKPIGDKGYYIEPTIFTNVKEDMIIAKEEIFG 315 (414)
Q Consensus 236 ~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fg 315 (414)
+++++++++|+|.++++.+||+++..+++++.+++++++++|+++++||...+..|+|++|||+ +++++|.+++||+||
T Consensus 321 ~~~~~~l~vG~p~~~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~vl~gG~~~~~~g~~~~Ptvl-~v~~~~~i~~eE~FG 399 (508)
T PLN02315 321 LTVYKQVKIGDPLEKGTLLGPLHTPESKKNFEKGIEIIKSQGGKILTGGSAIESEGNFVQPTIV-EISPDADVVKEELFG 399 (508)
T ss_pred HHHHHhcCCCCCCCCCCCCCCCcCHHHHHHHHHHHHHHHHCCCEEEECCCcCCCCCeEEecEEE-ecCCCChHHhCCCcC
Confidence 9999999999999999999999999999999999999999999999999865457899999999 699999999999999
Q ss_pred ceEEEEeeCCHHHHHHHhhcCCCCceEEEecCCHHHHHHHHH--hcceeEEEEcCcCC-CCCCCCcccCCCCCCCccchH
Q 015042 316 PVMALMKFKTVEEAIKSANNTQYGLAAGIVTKDLNVANTVSR--SIRAGIIWINCYFG-FSMDCPYGGYKMSGFGREYGL 392 (414)
Q Consensus 316 Pvl~v~~~~~~~eai~~~n~~~~gl~~sv~s~d~~~~~~~~~--~l~~g~v~iN~~~~-~~~~~p~gG~~~sG~g~~~g~ 392 (414)
||++|++|+|+||||+++|+++|||++||||+|.+.++++++ ++++|.|+||+... ..+.+||||+|.||+|+++|.
T Consensus 400 PVl~V~~~~~~deai~~aN~~~~gL~a~Vft~d~~~a~~~~~~~~l~~G~v~iN~~~~~~~~~~PfGG~k~SG~G~~~G~ 479 (508)
T PLN02315 400 PVLYVMKFKTLEEAIEINNSVPQGLSSSIFTRNPETIFKWIGPLGSDCGIVNVNIPTNGAEIGGAFGGEKATGGGREAGS 479 (508)
T ss_pred CEEEEEEeCCHHHHHHHHhCCCCCCeEEEEcCCHHHHHHHhhhcccceeEEEEcCCCCCCCCCCCCCccccccCCccchH
Confidence 999999999999999999999999999999999999999985 79999999998654 346789999999999999999
Q ss_pred HHHHhhheeeEEEeeC
Q 015042 393 ESLYKYLQIKSVVTPI 408 (414)
Q Consensus 393 ~~~~~~~~~k~i~~~~ 408 (414)
+++++||++|+|+++.
T Consensus 480 ~~l~~ft~~k~v~~~~ 495 (508)
T PLN02315 480 DSWKQYMRRSTCTINY 495 (508)
T ss_pred HHHHHHhhEEEEEEec
Confidence 9999999999998775
|
|
| >cd07119 ALDH_BADH-GbsA Bacillus subtilis NAD+-dependent betaine aldehyde dehydrogenase-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-87 Score=684.22 Aligned_cols=407 Identities=47% Similarity=0.791 Sum_probs=384.5
Q ss_pred CHHHHHHHHHhHHHHHHHHHHhcCCChHHHhhchHHHHHHHHHHHHHhhhhhcCcccccCCCcccceeecCCceEEEEcC
Q 015042 1 MWKFADLIEEHVEELAALDALDAGKVYLRAKTAEIPGAAEFLRFFAGAADKIHGEVLKMSSELQGYTLREPVGVVGHIIP 80 (414)
Q Consensus 1 L~~~a~~l~~~~~~l~~~~~~etGk~~~e~~~~ei~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p 80 (414)
|+++++.|++++++|++++++|+|||..++. .|+..+++.+++++.+.++..+...+...+...+.+++|+|||++|+|
T Consensus 65 L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~-~ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GvV~~I~p 143 (482)
T cd07119 65 LFRIADKIREDAEELARLETLNTGKTLRESE-IDIDDVANCFRYYAGLATKETGEVYDVPPHVISRTVREPVGVCGLITP 143 (482)
T ss_pred HHHHHHHHHHhHHHHHHHHHHHcCCCHHHHH-HHHHHHHHHHHHHHHHHHHhcCccccCCCCceEEEEEeeeeeEEEEcC
Confidence 5789999999999999999999999999865 599999999999999887665554433345567899999999999999
Q ss_pred CccchHHHHHhHHHHHhhCCeEEeecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhhHHHhhhCCCccEEEEeCCc
Q 015042 81 WNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLTALYYAHLAKLAGIPDGVLNVVPGFGPTAGAAICSHMDIDYVCFTGST 160 (414)
Q Consensus 81 ~n~P~~~~~~~~~~aLaaGN~vv~kps~~~~~~~~~l~~~l~~aG~p~g~v~~v~~~~~~~~~~l~~~~~v~~v~~tGs~ 160 (414)
||||+...++++++||++||+||+|||+.+|.++..+.++|.++|+|+|+++++++++.+.++.|+.||++|+|.||||+
T Consensus 144 ~N~P~~~~~~~~~~ALaaGN~VilKps~~~p~~~~~l~~~~~~aGlP~gv~~~v~g~~~~~~~~l~~~~~v~~V~fTGs~ 223 (482)
T cd07119 144 WNYPLLQAAWKLAPALAAGNTVVIKPSEVTPLTTIALFELIEEAGLPAGVVNLVTGSGATVGAELAESPDVDLVSFTGGT 223 (482)
T ss_pred CchHHHHHHHHHHHHHhcCCEEEEECCccccHHHHHHHHHHHHcCCCcCcEEEEecCcHHHHHHHhcCCCCCEEEEECcH
Confidence 99999999999999999999999999999999999999999999999999999998776789999999999999999999
Q ss_pred HHHHHHHHHHHhcccceeEEEcCCCCCceEcCCCCHHHHHHHHHHHhhccCCCCcccCceEEEeCchHHHHHHHHHHHHh
Q 015042 161 DVGRLVMQAAAASNLKQVSLELGGKSPLLIFDDADLDTAADVALLGNLYNKGEICVASSRVFVQEGIYDKFEKKLLEKAK 240 (414)
Q Consensus 161 ~~g~~i~~~~a~~~~~~~~~e~gg~~~~iV~~dadl~~aa~~i~~~~~~~~Gq~C~a~~~i~V~~~i~d~f~~~l~~~~~ 240 (414)
.+|+.|.+.++ .+++|+++|+|||||+||++|||++.|++.+++++|.++||.|+++++||||+++||+|+++|++.++
T Consensus 224 ~~g~~i~~~aa-~~~~~~~lElGGkn~~iV~~dADl~~Aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~ 302 (482)
T cd07119 224 ATGRSIMRAAA-GNVKKVALELGGKNPNIVFADADFETAVDQALNGVFFNAGQVCSAGSRLLVEESIHDKFVAALAERAK 302 (482)
T ss_pred HHHHHHHHHHH-hcCCcEEEECCCCCceEECCCCCHHHHHHHHHHHHHhcCCCCCCCCeEEEEcHHHHHHHHHHHHHHHH
Confidence 99999999988 88999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hcccCCCCCCCCcccccCCHHHHHHHHHHHHHHHHcCCEEEeCCcccC----CCCceeeeEEEeeCCCcccccccceecc
Q 015042 241 AWLVGDPFDPTVRQGPQISERHFDRILSYIEHGKREGATLLTGGKPIG----DKGYYIEPTIFTNVKEDMIIAKEEIFGP 316 (414)
Q Consensus 241 ~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~----~~g~~~~Ptvl~~~~~~~~~~~~E~fgP 316 (414)
++++|+|.++++++||++++.+++++++++++++++|+++++||.... ..|+|+.|||+.+++++|.+++||+|||
T Consensus 303 ~~~~G~~~~~~~~~gpli~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~~~~~g~~~~Ptvl~~~~~~~~i~~eE~FgP 382 (482)
T cd07119 303 KIKLGNGLDADTEMGPLVSAEHREKVLSYIQLGKEEGARLVCGGKRPTGDELAKGYFVEPTIFDDVDRTMRIVQEEIFGP 382 (482)
T ss_pred hcCCCCCCCCCCcCCCCCCHHHHHHHHHHHHHHHHCCCEEEeCCcccccccCCCCceECCEEEecCCCCChHhhCCCCCc
Confidence 999999999999999999999999999999999999999999997542 2589999999999999999999999999
Q ss_pred eEEEEeeCCHHHHHHHhhcCCCCceEEEecCCHHHHHHHHHhcceeEEEEcCcCCCCCCCCcccCCCCCCCccchHHHHH
Q 015042 317 VMALMKFKTVEEAIKSANNTQYGLAAGIVTKDLNVANTVSRSIRAGIIWINCYFGFSMDCPYGGYKMSGFGREYGLESLY 396 (414)
Q Consensus 317 vl~v~~~~~~~eai~~~n~~~~gl~~sv~s~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~p~gG~~~sG~g~~~g~~~~~ 396 (414)
|++|++|+|++|||+++|+++|||++||||+|.+.++++++++++|.|+||++....+.+||||+|.||+|+++|++|++
T Consensus 383 vl~v~~~~~~deai~~~n~~~~gL~~~v~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~PfGG~k~SG~G~~~G~~~l~ 462 (482)
T cd07119 383 VLTVERFDTEEEAIRLANDTPYGLAGAVWTKDIARANRVARRLRAGTVWINDYHPYFAEAPWGGYKQSGIGRELGPTGLE 462 (482)
T ss_pred eEEEeccCCHHHHHHHHhCCCCCceEEEECCCHHHHHHHHHhcCcceEEECCCCCCCCCCCcCCcccCcCCccchHHHHH
Confidence 99999999999999999999999999999999999999999999999999998777788999999999999999999999
Q ss_pred hhheeeEEEeeCC
Q 015042 397 KYLQIKSVVTPIY 409 (414)
Q Consensus 397 ~~~~~k~i~~~~~ 409 (414)
+||+.|+|+++..
T Consensus 463 ~~t~~k~v~~~~~ 475 (482)
T cd07119 463 EYQETKHININLS 475 (482)
T ss_pred HHhceEEEEEecC
Confidence 9999999988764
|
Included in this CD is the NAD+-dependent, betaine aldehyde dehydrogenase (BADH, GbsA, EC=1.2.1.8) of Bacillus subtilis involved in the synthesis of the osmoprotectant glycine betaine from choline or glycine betaine aldehyde. |
| >TIGR02299 HpaE 5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-87 Score=684.74 Aligned_cols=406 Identities=45% Similarity=0.749 Sum_probs=381.1
Q ss_pred CHHHHHHHHHhHHHHHHHHHHhcCCChHHHhhchHHHHHHHHHHHHHhhhh-hcCcccccCCCcccceeecCCceEEEEc
Q 015042 1 MWKFADLIEEHVEELAALDALDAGKVYLRAKTAEIPGAAEFLRFFAGAADK-IHGEVLKMSSELQGYTLREPVGVVGHII 79 (414)
Q Consensus 1 L~~~a~~l~~~~~~l~~~~~~etGk~~~e~~~~ei~~~~~~l~~~a~~~~~-~~~~~~~~~~~~~~~~~~~P~Gvv~~i~ 79 (414)
|+++++.|++++++|++++++|+||+..++. .|+..+++.++++++..++ ..+...+.. ....+.+++|+|||++|+
T Consensus 66 L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~-~ev~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~P~Gvv~~I~ 143 (488)
T TIGR02299 66 LHKIADLIEQHADEIAVLECLDCGQPLRQTR-QQVIRAAENFRFFADKCEEAMDGRTYPVD-THLNYTVRVPVGPVGLIT 143 (488)
T ss_pred HHHHHHHHHHhHHHHHHHHHHHcCCcHHHHH-HHHHHHHHHHHHHHHhHHHhcCCccccCC-CceEEEEEEecceEEEEC
Confidence 5789999999999999999999999999865 6999999999999987763 333333322 344678899999999999
Q ss_pred CCccchHHHHHhHHHHHhhCCeEEeecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhhHHHhhhCCCccEEEEeCC
Q 015042 80 PWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLTALYYAHLAKLAGIPDGVLNVVPGFGPTAGAAICSHMDIDYVCFTGS 159 (414)
Q Consensus 80 p~n~P~~~~~~~~~~aLaaGN~vv~kps~~~~~~~~~l~~~l~~aG~p~g~v~~v~~~~~~~~~~l~~~~~v~~v~~tGs 159 (414)
|||||+...++++++||++||+||+|||+.+|.++..+.++|.++|+|+|+++++++++.+.++.|+.||++|.|.||||
T Consensus 144 p~N~P~~~~~~~~~~ALaaGN~VIlKps~~~p~~~~~l~~~~~~aGlP~gvv~~v~g~~~~~~~~l~~~~~v~~V~fTGS 223 (488)
T TIGR02299 144 PWNAPFMLSTWKIAPALAFGNTVVLKPAEWSPLTAARLAEIAKEAGLPDGVFNLVHGFGEEAGKALVAHPDVKAVSFTGE 223 (488)
T ss_pred CCccHHHHHHHHHHHHHHcCCEEEEECchhchHHHHHHHHHHHHcCcChhheeEEeCCchHHHHHHhcCCCcCEEEEECc
Confidence 99999999999999999999999999999999999999999999999999999999877778899999999999999999
Q ss_pred cHHHHHHHHHHHhcccceeEEEcCCCCCceEcCCCCHHHHHHHHHHHhhccCCCCcccCceEEEeCchHHHHHHHHHHHH
Q 015042 160 TDVGRLVMQAAAASNLKQVSLELGGKSPLLIFDDADLDTAADVALLGNLYNKGEICVASSRVFVQEGIYDKFEKKLLEKA 239 (414)
Q Consensus 160 ~~~g~~i~~~~a~~~~~~~~~e~gg~~~~iV~~dadl~~aa~~i~~~~~~~~Gq~C~a~~~i~V~~~i~d~f~~~l~~~~ 239 (414)
..+|+.|++.++ ++++|+++|+|||||+||++|||++.|++.+++++|.|+||.|+++++||||++++|+|+++|++++
T Consensus 224 ~~~G~~i~~~aa-~~l~~~~lElGGknp~iV~~dAdl~~A~~~i~~~~~~~~GQ~C~a~~rv~V~~~v~d~f~~~l~~~~ 302 (488)
T TIGR02299 224 TATGSIIMRNGA-DTLKRFSMELGGKSPVIVFDDADLERALDAVVFMIFSFNGERCTASSRLLVQESIAEDFVEKLVERV 302 (488)
T ss_pred HHHHHHHHHHHH-hcCCeEEEEcCCCCeEEECCCCCHHHHHHHHHHHHHhccCCCCCCCcEEEEcHHHHHHHHHHHHHHH
Confidence 999999999988 8999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhcccCCCCCCCCcccccCCHHHHHHHHHHHHHHHHcCCEEEeCCcccC-------CCCceeeeEEEeeCCCcccccccc
Q 015042 240 KAWLVGDPFDPTVRQGPQISERHFDRILSYIEHGKREGATLLTGGKPIG-------DKGYYIEPTIFTNVKEDMIIAKEE 312 (414)
Q Consensus 240 ~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~-------~~g~~~~Ptvl~~~~~~~~~~~~E 312 (414)
+++++|+|.++++.+||++++.+++++++++++++++|+++++||...+ .+|+|++|||+.+++++|.+++||
T Consensus 303 ~~l~~g~p~~~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~v~~gg~~~~~~~~~~~~~g~~~~Ptvl~~~~~~~~i~~eE 382 (488)
T TIGR02299 303 RAIRVGHPLDPETEVGPLIHPEHLAKVLGYVEAAEKEGATILVGGERAPTFRGEDLGRGNYVLPTVFTGADNHMRIAQEE 382 (488)
T ss_pred hhCCcCCCCCCCCCCCCCcCHHHHHHHHHHHHHHHhCCCEEEeCCccCcccccccCCCCeEEccEEEecCCCCCchhhCC
Confidence 9999999999999999999999999999999999999999999987632 258999999999999999999999
Q ss_pred eecceEEEEeeCCHHHHHHHhhcCCCCceEEEecCCHHHHHHHHHhcceeEEEEcCcCCCCCCCCcccCCCCCCCccchH
Q 015042 313 IFGPVMALMKFKTVEEAIKSANNTQYGLAAGIVTKDLNVANTVSRSIRAGIIWINCYFGFSMDCPYGGYKMSGFGREYGL 392 (414)
Q Consensus 313 ~fgPvl~v~~~~~~~eai~~~n~~~~gl~~sv~s~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~p~gG~~~sG~g~~~g~ 392 (414)
+||||++|++|+|.+|||+++|+++|||++||||+|.+.++++++++++|.|+||+.....+.+||||+|.||+|+++|+
T Consensus 383 ~FgPvl~v~~~~~~~eai~~~N~~~~gL~a~v~t~d~~~a~~~~~~l~~G~v~iN~~~~~~~~~PfGG~k~SG~G~~~g~ 462 (488)
T TIGR02299 383 IFGPVLTVIPFKDEEEAIEKANDTRYGLAGYVWTNDVGRAHRVALALEAGMIWVNSQNVRHLPTPFGGVKASGIGREGGT 462 (488)
T ss_pred CcCCeEEEEeeCCHHHHHHHHhCCCCCceEEEEcCCHHHHHHHHHhCCcCeEEECCCCCCCCCCCCCCCccCcCCccchH
Confidence 99999999999999999999999999999999999999999999999999999998877777899999999999999999
Q ss_pred HHHHhhheeeEEEeeCC
Q 015042 393 ESLYKYLQIKSVVTPIY 409 (414)
Q Consensus 393 ~~~~~~~~~k~i~~~~~ 409 (414)
+|+++||++|+|+++.+
T Consensus 463 ~~~~~~~~~k~i~~~~~ 479 (488)
T TIGR02299 463 YSFDFYTETKNVALALG 479 (488)
T ss_pred HHHHHHhceEEEEEecC
Confidence 99999999999988763
|
This model represents the dehydrogenase responsible for the conversion of 5-carboxymethyl-2-hydroxymuconate semialdehyde to 5-carboxymethyl-2-hydroxymuconate (a tricarboxylic acid). This is the step in the degradation of 4-hydroxyphenylacetic acid via homoprotocatechuate following the oxidative opening of the aromatic ring. |
| >cd07144 ALDH_ALD2-YMR170C Saccharomyces cerevisiae aldehyde dehydrogenase 2 (YMR170c)-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-87 Score=683.51 Aligned_cols=406 Identities=53% Similarity=0.889 Sum_probs=382.1
Q ss_pred CHHHHHHHHHhHHHHHHHHHHhcCCChHHHhhchHHHHHHHHHHHHHhhhhhcCcccccCCCcccceeecCCceEEEEcC
Q 015042 1 MWKFADLIEEHVEELAALDALDAGKVYLRAKTAEIPGAAEFLRFFAGAADKIHGEVLKMSSELQGYTLREPVGVVGHIIP 80 (414)
Q Consensus 1 L~~~a~~l~~~~~~l~~~~~~etGk~~~e~~~~ei~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p 80 (414)
|+++++.|++++++|++++++|+|||..+....|+..+++.+++++.+.++..+...+...+...+..++|+|||++|+|
T Consensus 74 L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~~~~~~g~~~~~~~~~~~~~~~~P~GvV~~I~p 153 (484)
T cd07144 74 LDKLADLVEKNRDLLAAIEALDSGKPYHSNALGDLDEIIAVIRYYAGWADKIQGKTIPTSPNKLAYTLHEPYGVCGQIIP 153 (484)
T ss_pred HHHHHHHHHHhHHHHHHHHHHHcCCChHHHHHHHHHHHHHHHHHHHHHHHHhcCceecCCCCceEEEEEecceEEEEECc
Confidence 57899999999999999999999999876555699999999999999887775544433234456788999999999999
Q ss_pred CccchHHHHHhHHHHHhhCCeEEeecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhhHHHhhhCCCccEEEEeCCc
Q 015042 81 WNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLTALYYAHLAKLAGIPDGVLNVVPGFGPTAGAAICSHMDIDYVCFTGST 160 (414)
Q Consensus 81 ~n~P~~~~~~~~~~aLaaGN~vv~kps~~~~~~~~~l~~~l~~aG~p~g~v~~v~~~~~~~~~~l~~~~~v~~v~~tGs~ 160 (414)
||||+...++++++||++||+||+|||+.+|.++..+.++|.++|+|+|++|++++++.+.++.|+.||++|.|.||||+
T Consensus 154 ~N~P~~~~~~~~~~ALaaGN~VV~Kps~~~p~~~~~l~~~~~~aglP~gv~~~v~g~~~~~~~~L~~~~~vd~V~fTGS~ 233 (484)
T cd07144 154 WNYPLAMAAWKLAPALAAGNTVVIKPAENTPLSLLYFANLVKEAGFPPGVVNIIPGYGAVAGSALAEHPDVDKIAFTGST 233 (484)
T ss_pred CCCHHHHHHHHHHHHHHcCCEEEEECCccchHHHHHHHHHHHHhCcCCCcEEEEecCCchHHHHHhcCCCcCEEEEECcH
Confidence 99999999999999999999999999999999999999999999999999999999777889999999999999999999
Q ss_pred HHHHHHHHHHHhcccceeEEEcCCCCCceEcCCCCHHHHHHHHHHHhhccCCCCcccCceEEEeCchHHHHHHHHHHHHh
Q 015042 161 DVGRLVMQAAAASNLKQVSLELGGKSPLLIFDDADLDTAADVALLGNLYNKGEICVASSRVFVQEGIYDKFEKKLLEKAK 240 (414)
Q Consensus 161 ~~g~~i~~~~a~~~~~~~~~e~gg~~~~iV~~dadl~~aa~~i~~~~~~~~Gq~C~a~~~i~V~~~i~d~f~~~l~~~~~ 240 (414)
.+|+.|.+.++ .+++|+++|+|||||+||++|||++.|++.+++++|.|+||.|+++++||||+++||+|+++|+++++
T Consensus 234 ~~g~~i~~~a~-~~~~~~~lElGGk~p~iV~~dADl~~Aa~~i~~~~f~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~ 312 (484)
T cd07144 234 ATGRLVMKAAA-QNLKAVTLECGGKSPALVFEDADLDQAVKWAAAGIMYNSGQNCTATSRIYVQESIYDKFVEKFVEHVK 312 (484)
T ss_pred HHHHHHHHHHH-hcCCeEEEEcCCCCeEEECCCCCHHHHHHHHHHHHHhcCCCCCCCCceEEEcHHHHHHHHHHHHHHHH
Confidence 99999999887 78999999999999999999999999999999999999999999999999999999999999999998
Q ss_pred h-cccCCCCCCCCcccccCCHHHHHHHHHHHHHHHHcCCEEEeCCcccC---CCCceeeeEEEeeCCCcccccccceecc
Q 015042 241 A-WLVGDPFDPTVRQGPQISERHFDRILSYIEHGKREGATLLTGGKPIG---DKGYYIEPTIFTNVKEDMIIAKEEIFGP 316 (414)
Q Consensus 241 ~-~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~---~~g~~~~Ptvl~~~~~~~~~~~~E~fgP 316 (414)
+ +++|+|.++++++||+++..+++++.+++++++++|+++++||.... ..|+|++|||+.+++++|.+++||+|||
T Consensus 313 ~~~~~G~p~~~~~~~gpli~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~~~~~~g~~~~Ptvl~~v~~~~~~~~eE~FgP 392 (484)
T cd07144 313 QNYKVGSPFDDDTVVGPQVSKTQYDRVLSYIEKGKKEGAKLVYGGEKAPEGLGKGYFIPPTIFTDVPQDMRIVKEEIFGP 392 (484)
T ss_pred hhCCcCCCCCCCCcCCCCcCHHHHHHHHHHHHHHHHCCCEEEeCCCcCcccCCCCceECCEEEeCCCCCCchhhCCCCCc
Confidence 5 89999999999999999999999999999999999999999997643 3689999999999999999999999999
Q ss_pred eEEEEeeCCHHHHHHHhhcCCCCceEEEecCCHHHHHHHHHhcceeEEEEcCcCCCCCCCCcccCCCCCCCccchHHHHH
Q 015042 317 VMALMKFKTVEEAIKSANNTQYGLAAGIVTKDLNVANTVSRSIRAGIIWINCYFGFSMDCPYGGYKMSGFGREYGLESLY 396 (414)
Q Consensus 317 vl~v~~~~~~~eai~~~n~~~~gl~~sv~s~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~p~gG~~~sG~g~~~g~~~~~ 396 (414)
|++|++|+|++|||+++|+++|||++||||+|.+.++++++++++|+|+||++....+.+||||+|.||+|+++|++|++
T Consensus 393 vl~v~~~~~~~eai~~~n~~~~gLsa~i~t~d~~~a~~~~~~l~~G~v~iN~~~~~~~~~PfGG~k~SG~G~~~g~~~l~ 472 (484)
T cd07144 393 VVVISKFKTYEEAIKKANDTTYGLAAAVFTKDIRRAHRVARELEAGMVWINSSNDSDVGVPFGGFKMSGIGRELGEYGLE 472 (484)
T ss_pred eEEEeccCCHHHHHHHHhCCCCCceEEEECCCHHHHHHHHHhcCcCEEEECCCCCCCCCCCcCCcccCcCCCCchHHHHH
Confidence 99999999999999999999999999999999999999999999999999998777778999999999999999999999
Q ss_pred hhheeeEEEee
Q 015042 397 KYLQIKSVVTP 407 (414)
Q Consensus 397 ~~~~~k~i~~~ 407 (414)
+||++|+|+.+
T Consensus 473 ~~t~~k~v~~~ 483 (484)
T cd07144 473 TYTQTKAVHIN 483 (484)
T ss_pred HhhceEEEEEe
Confidence 99999999764
|
NAD(P)+-dependent Saccharomyces cerevisiae aldehyde dehydrogenase 2 (YMR170c, ALD5, EC=1.2.1.5) and other similar sequences, are present in this CD. |
| >PRK13473 gamma-aminobutyraldehyde dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.4e-87 Score=681.93 Aligned_cols=406 Identities=41% Similarity=0.690 Sum_probs=382.1
Q ss_pred CHHHHHHHHHhHHHHHHHHHHhcCCChHHHhhchHHHHHHHHHHHHHhhhhhcCccccc-CCCcccceeecCCceEEEEc
Q 015042 1 MWKFADLIEEHVEELAALDALDAGKVYLRAKTAEIPGAAEFLRFFAGAADKIHGEVLKM-SSELQGYTLREPVGVVGHII 79 (414)
Q Consensus 1 L~~~a~~l~~~~~~l~~~~~~etGk~~~e~~~~ei~~~~~~l~~~a~~~~~~~~~~~~~-~~~~~~~~~~~P~Gvv~~i~ 79 (414)
|+++++.|++++++|++++++|+|||..++...|+..+++.+++++..++.+.+...+. ..+...+.+++|+|||++|+
T Consensus 67 L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~r~P~GVv~~I~ 146 (475)
T PRK13473 67 LLKLADAIEENADEFARLESLNCGKPLHLALNDEIPAIVDVFRFFAGAARCLEGKAAGEYLEGHTSMIRRDPVGVVASIA 146 (475)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCcccccCCCCceeEEEEecceeEEEEc
Confidence 57899999999999999999999999987655699999999999998777664432221 12335678999999999999
Q ss_pred CCccchHHHHHhHHHHHhhCCeEEeecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhhHHHhhhCCCccEEEEeCC
Q 015042 80 PWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLTALYYAHLAKLAGIPDGVLNVVPGFGPTAGAAICSHMDIDYVCFTGS 159 (414)
Q Consensus 80 p~n~P~~~~~~~~~~aLaaGN~vv~kps~~~~~~~~~l~~~l~~aG~p~g~v~~v~~~~~~~~~~l~~~~~v~~v~~tGs 159 (414)
|||||+...++++++||++||+||+|||+.+|.++..+.+++.++ +|+|++|++++++.+.++.|+.|+++|.|.||||
T Consensus 147 p~N~P~~~~~~~i~~ALaaGN~VIlKps~~~p~~~~~l~~~~~~a-lP~gv~~~v~g~~~~~~~~l~~~~~vd~V~fTGs 225 (475)
T PRK13473 147 PWNYPLMMAAWKLAPALAAGNTVVLKPSEITPLTALKLAELAADI-LPPGVLNVVTGRGATVGDALVGHPKVRMVSLTGS 225 (475)
T ss_pred cCChHHHHHHHHHHHHHhcCCEEEEECCCCChHHHHHHHHHHHHh-CCcCcEEEEecCchHHHHHHhcCCCCCEEEEECc
Confidence 999999999999999999999999999999999999999999999 9999999999977788999999999999999999
Q ss_pred cHHHHHHHHHHHhcccceeEEEcCCCCCceEcCCCCHHHHHHHHHHHhhccCCCCcccCceEEEeCchHHHHHHHHHHHH
Q 015042 160 TDVGRLVMQAAAASNLKQVSLELGGKSPLLIFDDADLDTAADVALLGNLYNKGEICVASSRVFVQEGIYDKFEKKLLEKA 239 (414)
Q Consensus 160 ~~~g~~i~~~~a~~~~~~~~~e~gg~~~~iV~~dadl~~aa~~i~~~~~~~~Gq~C~a~~~i~V~~~i~d~f~~~l~~~~ 239 (414)
..+|+.|.+.++ .+++|+++|+|||||+||++|||++.|++.+++++|.|+||.|+++++||||++++|+|+++|++.+
T Consensus 226 ~~~g~~i~~~aa-~~~~~~~lElgG~~p~iV~~dADld~Aa~~i~~~~f~n~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~ 304 (475)
T PRK13473 226 IATGKHVLSAAA-DSVKRTHLELGGKAPVIVFDDADLDAVVEGIRTFGYYNAGQDCTAACRIYAQRGIYDDLVAKLAAAV 304 (475)
T ss_pred HHHHHHHHHHHh-hcCCcEEEECCCCCeeEECCCCCHHHHHHHHHHHHHhcCCCCCCCCeEEEEcHHHHHHHHHHHHHHH
Confidence 999999999988 8899999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhcccCCCCCCCCcccccCCHHHHHHHHHHHHHHHHcC-CEEEeCCcccCCCCceeeeEEEeeCCCcccccccceecceE
Q 015042 240 KAWLVGDPFDPTVRQGPQISERHFDRILSYIEHGKREG-ATLLTGGKPIGDKGYYIEPTIFTNVKEDMIIAKEEIFGPVM 318 (414)
Q Consensus 240 ~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~g-a~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl 318 (414)
+++++|+|.++++++||++++.+++++++++++++++| +++++||....+.|+|+.|||+.++++++.+++||+||||+
T Consensus 305 ~~l~~G~p~~~~~~~gpli~~~~~~~v~~~i~~a~~~G~a~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl 384 (475)
T PRK13473 305 ATLKVGDPDDEDTELGPLISAAHRDRVAGFVERAKALGHIRVVTGGEAPDGKGYYYEPTLLAGARQDDEIVQREVFGPVV 384 (475)
T ss_pred HhCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHcCCeEEEECCCcCCCCceeEcCEEEecCCCCChhhhCCccCCeE
Confidence 99999999999999999999999999999999999999 99999998754468999999999999999999999999999
Q ss_pred EEEeeCCHHHHHHHhhcCCCCceEEEecCCHHHHHHHHHhcceeEEEEcCcCCCCCCCCcccCCCCCCCccchHHHHHhh
Q 015042 319 ALMKFKTVEEAIKSANNTQYGLAAGIVTKDLNVANTVSRSIRAGIIWINCYFGFSMDCPYGGYKMSGFGREYGLESLYKY 398 (414)
Q Consensus 319 ~v~~~~~~~eai~~~n~~~~gl~~sv~s~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~p~gG~~~sG~g~~~g~~~~~~~ 398 (414)
+|++|+|+||||+++|+++|||++||||+|.+.++++++++++|+|+||++....+.+||||+|.||+|+++|++|+++|
T Consensus 385 ~v~~~~~~deai~~~N~~~~gL~a~v~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~PfGG~k~SG~G~~~g~~~~~~~ 464 (475)
T PRK13473 385 SVTPFDDEDQAVRWANDSDYGLASSVWTRDVGRAHRVSARLQYGCTWVNTHFMLVSEMPHGGQKQSGYGKDMSLYGLEDY 464 (475)
T ss_pred EEeccCCHHHHHHHHhCCCCCceEEEECCCHHHHHHHHHhCCcceEEECCCCCCCCCCCCCCccccccCccchHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999887777899999999999999999999999
Q ss_pred heeeEEEeeC
Q 015042 399 LQIKSVVTPI 408 (414)
Q Consensus 399 ~~~k~i~~~~ 408 (414)
|++|+|++++
T Consensus 465 t~~k~i~~~~ 474 (475)
T PRK13473 465 TVVRHVMVKH 474 (475)
T ss_pred hceEEEEEec
Confidence 9999998764
|
|
| >cd07107 ALDH_PhdK-like Nocardioides 2-carboxybenzaldehyde dehydrogenase, PhdK-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.5e-87 Score=677.46 Aligned_cols=404 Identities=43% Similarity=0.735 Sum_probs=380.7
Q ss_pred CHHHHHHHHHhHHHHHHHHHHhcCCChHHHhhchHHHHHHHHHHHHHhhhhhcCcccccCCCcccceeecCCceEEEEcC
Q 015042 1 MWKFADLIEEHVEELAALDALDAGKVYLRAKTAEIPGAAEFLRFFAGAADKIHGEVLKMSSELQGYTLREPVGVVGHIIP 80 (414)
Q Consensus 1 L~~~a~~l~~~~~~l~~~~~~etGk~~~e~~~~ei~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p 80 (414)
|+++++.|++++++|++++++|+|||..++ ..|+..+++.+++++...+.+.+...+...+...+.+++|+|||++|+|
T Consensus 47 L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a-~~ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p 125 (456)
T cd07107 47 LRELATRLREHAEELALIDALDCGNPVSAM-LGDVMVAAALLDYFAGLVTELKGETIPVGGRNLHYTLREPYGVVARIVA 125 (456)
T ss_pred HHHHHHHHHHhHHHHHHHHHHhcCCCHHHH-HHHHHHHHHHHHHHHHHHHHhCCccccCCCCceEEEEEecceEEEEECC
Confidence 578999999999999999999999999975 5799999999999998776665554443334567889999999999999
Q ss_pred CccchHHHHHhHHHHHhhCCeEEeecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhhHHHhhhCCCccEEEEeCCc
Q 015042 81 WNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLTALYYAHLAKLAGIPDGVLNVVPGFGPTAGAAICSHMDIDYVCFTGST 160 (414)
Q Consensus 81 ~n~P~~~~~~~~~~aLaaGN~vv~kps~~~~~~~~~l~~~l~~aG~p~g~v~~v~~~~~~~~~~l~~~~~v~~v~~tGs~ 160 (414)
||||+...++++++||++||+||+|||+.+|.++..+.+++.++ +|+|+||++++++.+.++.|+.||++|.|.||||+
T Consensus 126 ~N~P~~~~~~~~~~ALaaGN~VV~Kps~~~p~~~~~l~~~~~~~-lP~gvv~~v~g~~~~~~~~l~~~~~i~~v~fTGs~ 204 (456)
T cd07107 126 FNHPLMFAAAKIAAPLAAGNTVVVKPPEQAPLSALRLAELAREV-LPPGVFNILPGDGATAGAALVRHPDVKRIALIGSV 204 (456)
T ss_pred cccHHHHHHHHHhHHHHcCCEEEEeCCCCChHHHHHHHHHHHHh-CCcCcEEEEeCCCchHHHHHhcCCCCCEEEEECcH
Confidence 99999999999999999999999999999999999999999996 99999999998776788999999999999999999
Q ss_pred HHHHHHHHHHHhcccceeEEEcCCCCCceEcCCCCHHHHHHHHHHHh-hccCCCCcccCceEEEeCchHHHHHHHHHHHH
Q 015042 161 DVGRLVMQAAAASNLKQVSLELGGKSPLLIFDDADLDTAADVALLGN-LYNKGEICVASSRVFVQEGIYDKFEKKLLEKA 239 (414)
Q Consensus 161 ~~g~~i~~~~a~~~~~~~~~e~gg~~~~iV~~dadl~~aa~~i~~~~-~~~~Gq~C~a~~~i~V~~~i~d~f~~~l~~~~ 239 (414)
.+|+.|.+.++ .+++|+++|+|||||+||++|||++.|++.+++++ |.++||.|+++++||||+++||+|+++|++++
T Consensus 205 ~~g~~i~~~aa-~~~~~~~lElgG~~p~iV~~dadl~~Aa~~i~~~~~f~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~ 283 (456)
T cd07107 205 PTGRAIMRAAA-EGIKHVTLELGGKNALIVFPDADPEAAADAAVAGMNFTWCGQSCGSTSRLFVHESIYDEVLARVVERV 283 (456)
T ss_pred HHHHHHHHHHh-cCCCeEEEECCCCCeEEECCCCCHHHHHHHHHHhchhhcCCCCCcCCcEEEEcHHHHHHHHHHHHHHH
Confidence 99999999987 78999999999999999999999999999999995 89999999999999999999999999999999
Q ss_pred hhcccCCCCCCCCcccccCCHHHHHHHHHHHHHHHHcCCEEEeCCcccC----CCCceeeeEEEeeCCCcccccccceec
Q 015042 240 KAWLVGDPFDPTVRQGPQISERHFDRILSYIEHGKREGATLLTGGKPIG----DKGYYIEPTIFTNVKEDMIIAKEEIFG 315 (414)
Q Consensus 240 ~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~----~~g~~~~Ptvl~~~~~~~~~~~~E~fg 315 (414)
+++++|+|.++++++||+++..+++++++++++++.+|+++++||.... ..|+|++|||+.+++++|++++||+||
T Consensus 284 ~~l~~g~p~~~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~v~~gG~~~~~~~~~~g~~~~PTvl~~v~~~~~i~~eE~FG 363 (456)
T cd07107 284 AAIKVGDPTDPATTMGPLVSRQQYDRVMHYIDSAKREGARLVTGGGRPEGPALEGGFYVEPTVFADVTPGMRIAREEIFG 363 (456)
T ss_pred HhCCCCCCCCCCCCcCcccCHHHHHHHHHHHHHHHHCCCEEEeCCCccccccCCCCceECCEEEECCCCCChhhhCCCCC
Confidence 9999999999999999999999999999999999999999999997532 358999999999999999999999999
Q ss_pred ceEEEEeeCCHHHHHHHhhcCCCCceEEEecCCHHHHHHHHHhcceeEEEEcCcCCCCCCCCcccCCCCCCCccchHHHH
Q 015042 316 PVMALMKFKTVEEAIKSANNTQYGLAAGIVTKDLNVANTVSRSIRAGIIWINCYFGFSMDCPYGGYKMSGFGREYGLESL 395 (414)
Q Consensus 316 Pvl~v~~~~~~~eai~~~n~~~~gl~~sv~s~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~p~gG~~~sG~g~~~g~~~~ 395 (414)
||++|++|+|+||||+++|+++|||++||||+|.++++++++++++|.|+||++....+.+||||+|+||+|+++|++|+
T Consensus 364 Pvl~i~~~~~~~eai~~~n~~~~gL~a~vft~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~pfgG~k~SG~G~~~g~~~~ 443 (456)
T cd07107 364 PVLSVLRWRDEAEMVAQANGVEYGLTAAIWTNDISQAHRTARRVEAGYVWINGSSRHFLGAPFGGVKNSGIGREECLEEL 443 (456)
T ss_pred ceEEEEeeCCHHHHHHHHhCCCCcceEEEECCCHHHHHHHHHhcCcCEEEECCCCCCCCCCCcCCcccccCCcCchHHHH
Confidence 99999999999999999999999999999999999999999999999999999887778899999999999999999999
Q ss_pred HhhheeeEEEee
Q 015042 396 YKYLQIKSVVTP 407 (414)
Q Consensus 396 ~~~~~~k~i~~~ 407 (414)
++||++|+|+++
T Consensus 444 ~~~~~~k~v~~~ 455 (456)
T cd07107 444 LSYTQEKNVNVR 455 (456)
T ss_pred HHhhceEEEEEe
Confidence 999999999875
|
Nocardioides sp. strain KP72-carboxybenzaldehyde dehydrogenase (PhdK), an enzyme involved in phenanthrene degradation, and other similar sequences, are present in this CD. |
| >cd07097 ALDH_KGSADH-YcbD Bacillus subtilis NADP+-dependent alpha-ketoglutaric semialdehyde dehydrogenase ycbD-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.9e-87 Score=680.61 Aligned_cols=403 Identities=44% Similarity=0.730 Sum_probs=379.5
Q ss_pred CHHHHHHHHHhHHHHHHHHHHhcCCChHHHhhchHHHHHHHHHHHHHhhhhhcCccccc-CCCcccceeecCCceEEEEc
Q 015042 1 MWKFADLIEEHVEELAALDALDAGKVYLRAKTAEIPGAAEFLRFFAGAADKIHGEVLKM-SSELQGYTLREPVGVVGHII 79 (414)
Q Consensus 1 L~~~a~~l~~~~~~l~~~~~~etGk~~~e~~~~ei~~~~~~l~~~a~~~~~~~~~~~~~-~~~~~~~~~~~P~Gvv~~i~ 79 (414)
|+++++.|++|+++|++++++|+|||..++. .|+..+++.+++++....+..+..... ..+...+.+++|+|||++|+
T Consensus 65 L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a~-~ev~~~~~~l~~~a~~~~~~~g~~~~~~~~~~~~~~~~~P~GVv~~I~ 143 (473)
T cd07097 65 LDKAGDELEARKEELARLLTREEGKTLPEAR-GEVTRAGQIFRYYAGEALRLSGETLPSTRPGVEVETTREPLGVVGLIT 143 (473)
T ss_pred HHHHHHHHHHhHHHHHHHHHHHcCCCHHHHH-HHHHHHHHHHHHHHHHHHHhcCcccccCCCCceEEEEEEeeeeEEEEc
Confidence 5789999999999999999999999999865 599999999999998877665543322 13455789999999999999
Q ss_pred CCccchHHHHHhHHHHHhhCCeEEeecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhhHHHhhhCCCccEEEEeCC
Q 015042 80 PWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLTALYYAHLAKLAGIPDGVLNVVPGFGPTAGAAICSHMDIDYVCFTGS 159 (414)
Q Consensus 80 p~n~P~~~~~~~~~~aLaaGN~vv~kps~~~~~~~~~l~~~l~~aG~p~g~v~~v~~~~~~~~~~l~~~~~v~~v~~tGs 159 (414)
|||||+...++++++||++||+||+|||+.+|.++..+.+++.++|+|+|++|++++++.++++.|+.|+++|.|.||||
T Consensus 144 P~N~Pl~~~~~~i~~ALaaGN~VIlKps~~~p~~~~~l~~~~~~aGlP~gvv~vv~g~~~~~~~~l~~~~~v~~v~fTGs 223 (473)
T cd07097 144 PWNFPIAIPAWKIAPALAYGNTVVFKPAELTPASAWALVEILEEAGLPAGVFNLVMGSGSEVGQALVEHPDVDAVSFTGS 223 (473)
T ss_pred ccChHHHHHHHHHHHHHHcCCEEEEeCCCCCcHHHHHHHHHHHHcCCCCcceEEeccCchHHHHHHhcCCCCCEEEEECc
Confidence 99999999999999999999999999999999999999999999999999999999977778999999999999999999
Q ss_pred cHHHHHHHHHHHhcccceeEEEcCCCCCceEcCCCCHHHHHHHHHHHhhccCCCCcccCceEEEeCchHHHHHHHHHHHH
Q 015042 160 TDVGRLVMQAAAASNLKQVSLELGGKSPLLIFDDADLDTAADVALLGNLYNKGEICVASSRVFVQEGIYDKFEKKLLEKA 239 (414)
Q Consensus 160 ~~~g~~i~~~~a~~~~~~~~~e~gg~~~~iV~~dadl~~aa~~i~~~~~~~~Gq~C~a~~~i~V~~~i~d~f~~~l~~~~ 239 (414)
+.+|+.|.+.++ .+++|+++|+|||||+||++|||++.|++.+++++|.|+||.|+++++||||+++||+|+++|++++
T Consensus 224 ~~~g~~i~~~aa-~~~~~~~lElGGk~~~iV~~dadl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~ 302 (473)
T cd07097 224 TAVGRRIAAAAA-ARGARVQLEMGGKNPLVVLDDADLDLAVECAVQGAFFSTGQRCTASSRLIVTEGIHDRFVEALVERT 302 (473)
T ss_pred HHHHHHHHHHHh-ccCCcEEEECCCCCeeEECCCCCHHHHHHHHHHHHHhccCCCCcCCeeEEEehhHHHHHHHHHHHHH
Confidence 999999999988 8899999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhcccCCCCCCCCcccccCCHHHHHHHHHHHHHHHHcCCEEEeCCcccC--CCCceeeeEEEeeCCCcccccccceecce
Q 015042 240 KAWLVGDPFDPTVRQGPQISERHFDRILSYIEHGKREGATLLTGGKPIG--DKGYYIEPTIFTNVKEDMIIAKEEIFGPV 317 (414)
Q Consensus 240 ~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~--~~g~~~~Ptvl~~~~~~~~~~~~E~fgPv 317 (414)
+++++|+|.++++++||++++.+++++++++++++++|+++++||...+ ..|+|++|||+.++++++.+++||+||||
T Consensus 303 ~~~~~g~p~~~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~v~~gg~~~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPv 382 (473)
T cd07097 303 KALKVGDALDEGVDIGPVVSERQLEKDLRYIEIARSEGAKLVYGGERLKRPDEGYYLAPALFAGVTNDMRIAREEIFGPV 382 (473)
T ss_pred HhCCCCCCCCCCCcCCCCCCHHHHHHHHHHHHHHHHCCCEEEeCCccCCCCCCCeEEeeEEeccCCCCChhhhCCCcCce
Confidence 9999999999999999999999999999999999999999999997643 35899999999999999999999999999
Q ss_pred EEEEeeCCHHHHHHHhhcCCCCceEEEecCCHHHHHHHHHhcceeEEEEcCcCC-CCCCCCcccCCCCCCC-ccchHHHH
Q 015042 318 MALMKFKTVEEAIKSANNTQYGLAAGIVTKDLNVANTVSRSIRAGIIWINCYFG-FSMDCPYGGYKMSGFG-REYGLESL 395 (414)
Q Consensus 318 l~v~~~~~~~eai~~~n~~~~gl~~sv~s~d~~~~~~~~~~l~~g~v~iN~~~~-~~~~~p~gG~~~sG~g-~~~g~~~~ 395 (414)
++|++|+|++||++++|+++|||+++|||+|.+.++++++++++|+|+||++.. ..+.+||||+|.||+| +++|++|+
T Consensus 383 l~v~~~~~~~eai~~~n~~~~gL~~~v~t~d~~~a~~~~~~l~~g~v~iN~~~~~~~~~~PfGG~~~SG~G~~~~g~~~l 462 (473)
T cd07097 383 AAVIRVRDYDEALAIANDTEFGLSAGIVTTSLKHATHFKRRVEAGVVMVNLPTAGVDYHVPFGGRKGSSYGPREQGEAAL 462 (473)
T ss_pred EEEeccCCHHHHHHHHhCCCCCceEEEECCCHHHHHHHHHhCCcCeEEECCCCCCCCCCCCCCCcccccCcccCCcHHHH
Confidence 999999999999999999999999999999999999999999999999998765 3467999999999999 89999999
Q ss_pred HhhheeeEEE
Q 015042 396 YKYLQIKSVV 405 (414)
Q Consensus 396 ~~~~~~k~i~ 405 (414)
++||++|+|.
T Consensus 463 ~~f~~~k~v~ 472 (473)
T cd07097 463 EFYTTIKTVY 472 (473)
T ss_pred HHhhceeEEe
Confidence 9999999985
|
Kinetic studies of the Bacillus subtilis ALDH-like ycbD protein, which is involved in d-glucarate/d-galactarate utilization, reveal that it is a NADP+-dependent, alpha-ketoglutaric semialdehyde dehydrogenase (KGSADH). KGSADHs (EC 1.2.1.26) catalyze the NAD(P)+-dependent conversion of KGSA to alpha-ketoglutarate. Interestingly, the NADP+-dependent, tetrameric, 2,5-dioxopentanoate dehydrogenase (EC=1.2.1.26), an enzyme involved in the catabolic pathway for D-arabinose in Sulfolobus solfataricus, also clusters in this group. This CD shows a distant phylogenetic relationship to the Azospirillum brasilense KGSADH-II (-III) group. |
| >cd07118 ALDH_SNDH Gluconobacter oxydans L-sorbosone dehydrogenase-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.9e-87 Score=674.61 Aligned_cols=403 Identities=47% Similarity=0.816 Sum_probs=380.5
Q ss_pred CHHHHHHHHHhHHHHHHHHHHhcCCChHHHhhchHHHHHHHHHHHHHhhhhhcCccccc-CCCcccceeecCCceEEEEc
Q 015042 1 MWKFADLIEEHVEELAALDALDAGKVYLRAKTAEIPGAAEFLRFFAGAADKIHGEVLKM-SSELQGYTLREPVGVVGHII 79 (414)
Q Consensus 1 L~~~a~~l~~~~~~l~~~~~~etGk~~~e~~~~ei~~~~~~l~~~a~~~~~~~~~~~~~-~~~~~~~~~~~P~Gvv~~i~ 79 (414)
|+++++.|++|+++|++++++|+|||..++ ..|+..+++.+++++.+.++..+...+. ..+...+.+++|+|||++|+
T Consensus 49 l~~~a~~l~~~~~~la~~~~~e~Gk~~~~a-~~ev~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GvV~~I~ 127 (454)
T cd07118 49 LLKVADLIRARRERLALIETLESGKPISQA-RGEIEGAADLWRYAASLARTLHGDSYNNLGDDMLGLVLREPIGVVGIIT 127 (454)
T ss_pred HHHHHHHHHHhHHHHHHHHHHHcCCCHHHH-HHHHHHHHHHHHHHHHHHHHhcCcccccCCCCceeeEEeecceEEEEEC
Confidence 578999999999999999999999999976 4699999999999998776655443322 12345678999999999999
Q ss_pred CCccchHHHHHhHHHHHhhCCeEEeecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhhHHHhhhCCCccEEEEeCC
Q 015042 80 PWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLTALYYAHLAKLAGIPDGVLNVVPGFGPTAGAAICSHMDIDYVCFTGS 159 (414)
Q Consensus 80 p~n~P~~~~~~~~~~aLaaGN~vv~kps~~~~~~~~~l~~~l~~aG~p~g~v~~v~~~~~~~~~~l~~~~~v~~v~~tGs 159 (414)
|||||+..+++++++||++||+||+|||+.+|.++..+.++|.++|+|+|+++++++++.+.++.|+.|+++|.|.||||
T Consensus 128 p~N~P~~~~~~~i~~ALaaGN~Vi~Kps~~~p~~~~~l~~~~~~aG~P~g~~~~v~g~~~~~~~~L~~~~~v~~v~ftGs 207 (454)
T cd07118 128 PWNFPFLILSQKLPFALAAGCTVVVKPSEFTSGTTLMLAELLIEAGLPAGVVNIVTGYGATVGQAMTEHPDVDMVSFTGS 207 (454)
T ss_pred CCCcHHHHHHHHHHHHHhcCCEEEEECCCCCcHHHHHHHHHHHhcCCCccceEEEecCCchHHHHHhcCCCCCEEEEECc
Confidence 99999999999999999999999999999999999999999999999999999999877678999999999999999999
Q ss_pred cHHHHHHHHHHHhcccceeEEEcCCCCCceEcCCCCHHHHHHHHHHHhhccCCCCcccCceEEEeCchHHHHHHHHHHHH
Q 015042 160 TDVGRLVMQAAAASNLKQVSLELGGKSPLLIFDDADLDTAADVALLGNLYNKGEICVASSRVFVQEGIYDKFEKKLLEKA 239 (414)
Q Consensus 160 ~~~g~~i~~~~a~~~~~~~~~e~gg~~~~iV~~dadl~~aa~~i~~~~~~~~Gq~C~a~~~i~V~~~i~d~f~~~l~~~~ 239 (414)
+.+|+.|.+.++ .+++|+++|+|||||+||++|||++.|++.+++++|.++||.|+++++||||++++|+|+++|++++
T Consensus 208 ~~~g~~i~~~aa-~~~~~~~lelgG~n~~iV~~dAdl~~aa~~i~~~~f~~~GQ~C~a~~rv~V~~~i~d~f~~~L~~~~ 286 (454)
T cd07118 208 TRVGKAIAAAAA-RNLKKVSLELGGKNPQIVFADADLDAAADAVVFGVYFNAGECCNSGSRLLVHESIADAFVAAVVARS 286 (454)
T ss_pred HHHHHHHHHHHH-hcCCcEEeccCCCCceEECCCCCHHHHHHHHHHHHHhccCCCCCCCceEEEcHHHHHHHHHHHHHHH
Confidence 999999999988 7899999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhcccCCCCCCCCcccccCCHHHHHHHHHHHHHHHHcCCEEEeCCcccC-CCCceeeeEEEeeCCCcccccccceecceE
Q 015042 240 KAWLVGDPFDPTVRQGPQISERHFDRILSYIEHGKREGATLLTGGKPIG-DKGYYIEPTIFTNVKEDMIIAKEEIFGPVM 318 (414)
Q Consensus 240 ~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~-~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl 318 (414)
+++++|+|.++++++||++++.+++++.+++++++.+|+++++||.... ..|+|++|||+.++++++.+++||+||||+
T Consensus 287 ~~l~~g~p~~~~~~~gpli~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl 366 (454)
T cd07118 287 RKVRVGDPLDPETKVGAIINEAQLAKITDYVDAGRAEGATLLLGGERLASAAGLFYQPTIFTDVTPDMAIAREEIFGPVL 366 (454)
T ss_pred HhcCcCCCCCCCCcCCCCcCHHHHHHHHHHHHHHHhCCCEEEeCCCCCCCCCCeEEeCEEEeCCCCCCHHHhCCCCCceE
Confidence 9999999999999999999999999999999999999999999998754 368999999999999999999999999999
Q ss_pred EEEeeCCHHHHHHHhhcCCCCceEEEecCCHHHHHHHHHhcceeEEEEcCcCCCCCCCCcccCCCCCCCccchHHHHHhh
Q 015042 319 ALMKFKTVEEAIKSANNTQYGLAAGIVTKDLNVANTVSRSIRAGIIWINCYFGFSMDCPYGGYKMSGFGREYGLESLYKY 398 (414)
Q Consensus 319 ~v~~~~~~~eai~~~n~~~~gl~~sv~s~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~p~gG~~~sG~g~~~g~~~~~~~ 398 (414)
+|++|+|++||++++|+++|||++||||+|.+.++++++++++|.|+||++....+.+||||+|.||+|+++|++++++|
T Consensus 367 ~v~~~~~~~eai~~~n~~~~gL~~~vft~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~PfgG~~~SG~G~~~g~~~l~~~ 446 (454)
T cd07118 367 SVLTFDTVDEAIALANDTVYGLSAGVWSKDIDTALTVARRIRAGTVWVNTFLDGSPELPFGGFKQSGIGRELGRYGVEEY 446 (454)
T ss_pred EEEEECCHHHHHHHHhCCCccceEEEECCCHHHHHHHHHhcCcCEEEECCCCCCCCCCCcCCcccccCCcCchHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999887778899999999999999999999999
Q ss_pred heeeEEE
Q 015042 399 LQIKSVV 405 (414)
Q Consensus 399 ~~~k~i~ 405 (414)
|++|++.
T Consensus 447 t~~k~~~ 453 (454)
T cd07118 447 TELKTVH 453 (454)
T ss_pred hceeEEe
Confidence 9999985
|
Included in this CD is the L-sorbosone dehydrogenase (SNDH) from Gluconobacter oxydans UV10. In G. oxydans, D-sorbitol is converted to 2-keto-L-gulonate (a precursor of L-ascorbic acid) in sequential oxidation steps catalyzed by a FAD-dependent, L-sorbose dehydrogenase and an NAD(P)+-dependent, L-sorbosone dehydrogenase. |
| >cd07089 ALDH_CddD-AldA-like Rhodococcus ruber 6-oxolauric acid dehydrogenase-like and related proteins | Back alignment and domain information |
|---|
Probab=100.00 E-value=6e-87 Score=675.45 Aligned_cols=405 Identities=42% Similarity=0.697 Sum_probs=381.8
Q ss_pred CHHHHHHHHHhHHHHHHHHHHhcCCChHHHhhchHHHHHHHHHHHHHhhhhhcCcc-cccC----CCcccceeecCCceE
Q 015042 1 MWKFADLIEEHVEELAALDALDAGKVYLRAKTAEIPGAAEFLRFFAGAADKIHGEV-LKMS----SELQGYTLREPVGVV 75 (414)
Q Consensus 1 L~~~a~~l~~~~~~l~~~~~~etGk~~~e~~~~ei~~~~~~l~~~a~~~~~~~~~~-~~~~----~~~~~~~~~~P~Gvv 75 (414)
|+++++.|++|+++|++++++|+|||..++...|+..+++.+++++..+.+..+.. .+.. .+...+++++|+|||
T Consensus 48 L~~~a~~l~~~~~~la~~~~~e~Gk~~~~~~~~ev~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVV 127 (459)
T cd07089 48 LRQLHEALEARKEELRALLVAEVGAPVMTARAMQVDGPIGHLRYFADLADSFPWEFDLPVPALRGGPGRRVVRREPVGVV 127 (459)
T ss_pred HHHHHHHHHHhHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCceecCcccccCCCceeEEEEeeccEE
Confidence 57899999999999999999999999977666799999999999998887654443 2211 245678999999999
Q ss_pred EEEcCCccchHHHHHhHHHHHhhCCeEEeecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhhHHHhhhCCCccEEE
Q 015042 76 GHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLTALYYAHLAKLAGIPDGVLNVVPGFGPTAGAAICSHMDIDYVC 155 (414)
Q Consensus 76 ~~i~p~n~P~~~~~~~~~~aLaaGN~vv~kps~~~~~~~~~l~~~l~~aG~p~g~v~~v~~~~~~~~~~l~~~~~v~~v~ 155 (414)
++|+|||||+...++++++||++||+||+|||+.+|.++..+.++|.++|+|+|+++++++++.+.++.|+.||+++.|.
T Consensus 128 ~~I~P~N~P~~~~~~~~~~AL~aGN~vvlKps~~~p~~~~~l~~~~~~aglP~g~~~~v~g~~~~~~~~l~~~~~~~~v~ 207 (459)
T cd07089 128 AAITPWNFPFFLNLAKLAPALAAGNTVVLKPAPDTPLSALLLGEIIAETDLPAGVVNVVTGSDNAVGEALTTDPRVDMVS 207 (459)
T ss_pred EEEcCCchHHHHHHHHHHHHHHcCCEEEEECCCCChHHHHHHHHHHHHcCCCccceEEEecCcHHHHHHHhcCCCCCEEE
Confidence 99999999999999999999999999999999999999999999999999999999999997777899999999999999
Q ss_pred EeCCcHHHHHHHHHHHhcccceeEEEcCCCCCceEcCCCCHHHHHHHHHHHhhccCCCCcccCceEEEeCchHHHHHHHH
Q 015042 156 FTGSTDVGRLVMQAAAASNLKQVSLELGGKSPLLIFDDADLDTAADVALLGNLYNKGEICVASSRVFVQEGIYDKFEKKL 235 (414)
Q Consensus 156 ~tGs~~~g~~i~~~~a~~~~~~~~~e~gg~~~~iV~~dadl~~aa~~i~~~~~~~~Gq~C~a~~~i~V~~~i~d~f~~~l 235 (414)
||||+.+|+.|++.++ ++++|+++|+|||||+||++|||++.|++.+++++|.|+||.|+++++||||++++|+|+++|
T Consensus 208 ftGs~~~g~~v~~~aa-~~~~~~~lelgG~n~~iV~~dadl~~aa~~i~~~~~~~sGQ~C~a~~~v~V~~~v~~~f~~~l 286 (459)
T cd07089 208 FTGSTAVGRRIMAQAA-ATLKRVLLELGGKSANIVLDDADLAAAAPAAVGVCMHNAGQGCALTTRLLVPRSRYDEVVEAL 286 (459)
T ss_pred EECcHHHHHHHHHHHH-hcCCcEEEECCCCCeeEECCCCCHHHHHHHHHHHHHHhcCCcccCCeEEEEcHHHHHHHHHHH
Confidence 9999999999999988 789999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhhcccCCCCCCCCcccccCCHHHHHHHHHHHHHHHHcCCEEEeCCcccC--CCCceeeeEEEeeCCCcccccccce
Q 015042 236 LEKAKAWLVGDPFDPTVRQGPQISERHFDRILSYIEHGKREGATLLTGGKPIG--DKGYYIEPTIFTNVKEDMIIAKEEI 313 (414)
Q Consensus 236 ~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~--~~g~~~~Ptvl~~~~~~~~~~~~E~ 313 (414)
+++++++++|+|.++++++||+++..+++++++++++++++|+++++||.... ..|+|++|||+.+++++|.+++||+
T Consensus 287 ~~~~~~~~~g~p~~~~~~~gp~i~~~~~~~v~~~i~~a~~~Ga~~l~gg~~~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~ 366 (459)
T cd07089 287 AAAFEALPVGDPADPGTVMGPLISAAQRDRVEGYIARGRDEGARLVTGGGRPAGLDKGFYVEPTLFADVDNDMRIAQEEI 366 (459)
T ss_pred HHHHHhCCCCCCCCCCCCCCCCcCHHHHHHHHHHHHHHHHCCCEEEeCCCcCCCCCCCeEECCEEEEcCCCCCHHHhCCC
Confidence 99999999999999999999999999999999999999999999999997643 3689999999999999999999999
Q ss_pred ecceEEEEeeCCHHHHHHHhhcCCCCceEEEecCCHHHHHHHHHhcceeEEEEcCcCCCCCCCCcccCCCCCCCccchHH
Q 015042 314 FGPVMALMKFKTVEEAIKSANNTQYGLAAGIVTKDLNVANTVSRSIRAGIIWINCYFGFSMDCPYGGYKMSGFGREYGLE 393 (414)
Q Consensus 314 fgPvl~v~~~~~~~eai~~~n~~~~gl~~sv~s~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~p~gG~~~sG~g~~~g~~ 393 (414)
||||++|++|+|+||||+++|+++|||++||||+|.+.++++++++++|+|+||+.....+.+||||+|.||+|+++|++
T Consensus 367 FgPvl~v~~~~~~deai~~~n~~~~gL~~~v~t~d~~~~~~~~~~~~~G~v~iN~~~~~~~~~PfgG~k~SG~G~~~g~~ 446 (459)
T cd07089 367 FGPVLVVIPYDDDDEAVRIANDSDYGLSGGVWSADVDRAYRVARRIRTGSVGINGGGGYGPDAPFGGYKQSGLGRENGIE 446 (459)
T ss_pred cCceEEEeccCCHHHHHHHHhCCCCCCeEEEEcCCHHHHHHHHHhcCcCeEEECCCCCCCCCCCcCCcccccCCCCchHH
Confidence 99999999999999999999999999999999999999999999999999999998877788999999999999999999
Q ss_pred HHHhhheeeEEEe
Q 015042 394 SLYKYLQIKSVVT 406 (414)
Q Consensus 394 ~~~~~~~~k~i~~ 406 (414)
|+++||+.|+|.+
T Consensus 447 ~l~~ft~~k~v~~ 459 (459)
T cd07089 447 GLEEFLETKSIAY 459 (459)
T ss_pred HHHHhhceeEEeC
Confidence 9999999999863
|
The 6-oxolauric acid dehydrogenase (CddD) from Rhodococcus ruber SC1 which converts 6-oxolauric acid to dodecanedioic acid; and the aldehyde dehydrogenase (locus SSP0762) from Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 and also, the Mycobacterium tuberculosis H37Rv ALDH AldA (locus Rv0768) sequence; and other similar sequences, are included in this CD. |
| >cd07110 ALDH_F10_BADH Arabidopsis betaine aldehyde dehydrogenase 1 and 2, ALDH family 10A8 and 10A9-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.2e-87 Score=675.55 Aligned_cols=403 Identities=46% Similarity=0.797 Sum_probs=379.5
Q ss_pred CHHHHHHHHHhHHHHHHHHHHhcCCChHHHhhchHHHHHHHHHHHHHhhhhhcC---cccccC-CCcccceeecCCceEE
Q 015042 1 MWKFADLIEEHVEELAALDALDAGKVYLRAKTAEIPGAAEFLRFFAGAADKIHG---EVLKMS-SELQGYTLREPVGVVG 76 (414)
Q Consensus 1 L~~~a~~l~~~~~~l~~~~~~etGk~~~e~~~~ei~~~~~~l~~~a~~~~~~~~---~~~~~~-~~~~~~~~~~P~Gvv~ 76 (414)
|+++++.|++|+++|++++++|+|||..++. .|+..+++.+++++...+++.. ...+.. .+...+.+++|+|||+
T Consensus 47 L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~-~ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVV~ 125 (456)
T cd07110 47 LRAIAEGVRERREELAELEARDNGKPLDEAA-WDVDDVAGCFEYYADLAEQLDAKAERAVPLPSEDFKARVRREPVGVVG 125 (456)
T ss_pred HHHHHHHHHHhHHHHHHHHHHHcCCCHHHHH-HHHHHHHHHHHHHHHHHHHhhccCCccccCCCCCceeEEEEecceeEE
Confidence 5789999999999999999999999999764 5999999999999988876532 112211 2456788999999999
Q ss_pred EEcCCccchHHHHHhHHHHHhhCCeEEeecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhhHHHhhhCCCccEEEE
Q 015042 77 HIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLTALYYAHLAKLAGIPDGVLNVVPGFGPTAGAAICSHMDIDYVCF 156 (414)
Q Consensus 77 ~i~p~n~P~~~~~~~~~~aLaaGN~vv~kps~~~~~~~~~l~~~l~~aG~p~g~v~~v~~~~~~~~~~l~~~~~v~~v~~ 156 (414)
+|+|||||+...++++++||++||+||+|||+.+|+++..+.+++.++|+|+|+++++++++.+.++.|+.||++|+|.|
T Consensus 126 ~I~p~N~P~~~~~~~~~~ALaaGN~VV~Kps~~~p~~~~~l~~~~~~aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~V~f 205 (456)
T cd07110 126 LITPWNFPLLMAAWKVAPALAAGCTVVLKPSELTSLTELELAEIAAEAGLPPGVLNVVTGTGDEAGAPLAAHPGIDKISF 205 (456)
T ss_pred EECCCChHHHHHHHHHHHHHHcCCEEEEECcccchHHHHHHHHHHHHcCCCCCcEEEEecCchHHHHHHhcCCCCCEEEE
Confidence 99999999999999999999999999999999999999999999999999999999999977778999999999999999
Q ss_pred eCCcHHHHHHHHHHHhcccceeEEEcCCCCCceEcCCCCHHHHHHHHHHHhhccCCCCcccCceEEEeCchHHHHHHHHH
Q 015042 157 TGSTDVGRLVMQAAAASNLKQVSLELGGKSPLLIFDDADLDTAADVALLGNLYNKGEICVASSRVFVQEGIYDKFEKKLL 236 (414)
Q Consensus 157 tGs~~~g~~i~~~~a~~~~~~~~~e~gg~~~~iV~~dadl~~aa~~i~~~~~~~~Gq~C~a~~~i~V~~~i~d~f~~~l~ 236 (414)
|||+.+|+.|.+.++ ++++|+++|+|||||+||++|+|++.|++.+++++|.++||.|+++++||||++++|+|+++|+
T Consensus 206 TGs~~~g~~v~~~aa-~~~~~~~lElgG~~~~iV~~dadl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~d~f~~~l~ 284 (456)
T cd07110 206 TGSTATGSQVMQAAA-QDIKPVSLELGGKSPIIVFDDADLEKAVEWAMFGCFWNNGQICSATSRLLVHESIADAFLERLA 284 (456)
T ss_pred ECCHHHHHHHHHHHh-hcCCeEEEEcCCCCeeEECCCCCHHHHHHHHHHHHHhcCCCCCCCCceEEEcHHHHHHHHHHHH
Confidence 999999999999988 8899999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhhcccCCCCCCCCcccccCCHHHHHHHHHHHHHHHHcCCEEEeCCcccC--CCCceeeeEEEeeCCCccccccccee
Q 015042 237 EKAKAWLVGDPFDPTVRQGPQISERHFDRILSYIEHGKREGATLLTGGKPIG--DKGYYIEPTIFTNVKEDMIIAKEEIF 314 (414)
Q Consensus 237 ~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~--~~g~~~~Ptvl~~~~~~~~~~~~E~f 314 (414)
+.++++++|+|.++++++||++++.+++++++++++++.+|+++++||.... ..|+|+.|||+.+++++|.++++|+|
T Consensus 285 ~~~~~~~~g~p~~~~~~~Gpli~~~~~~~~~~~v~~a~~~Ga~~~~gg~~~~~~~~~~~~~Ptvl~~v~~~~~i~~~E~f 364 (456)
T cd07110 285 TAAEAIRVGDPLEEGVRLGPLVSQAQYEKVLSFIARGKEEGARLLCGGRRPAHLEKGYFIAPTVFADVPTDSRIWREEIF 364 (456)
T ss_pred HHHHhcCCCCCCCCCCCcCCCCCHHHHHHHHHHHHHHHhCCCEEEeCCCcccccCCCCcCCCEEEecCCCCChHhhCCCc
Confidence 9999999999999999999999999999999999999999999999997643 46899999999999999999999999
Q ss_pred cceEEEEeeCCHHHHHHHhhcCCCCceEEEecCCHHHHHHHHHhcceeEEEEcCcCCCCCCCCcccCCCCCCCccchHHH
Q 015042 315 GPVMALMKFKTVEEAIKSANNTQYGLAAGIVTKDLNVANTVSRSIRAGIIWINCYFGFSMDCPYGGYKMSGFGREYGLES 394 (414)
Q Consensus 315 gPvl~v~~~~~~~eai~~~n~~~~gl~~sv~s~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~p~gG~~~sG~g~~~g~~~ 394 (414)
|||++|++|+|.|||++++|+++|||++||||+|.+.++++++++++|+|+||++....+.+||||+|.||+|+++|++|
T Consensus 365 gPvl~v~~~~~~~eai~~~n~~~~gL~~~v~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~PfGG~k~SG~G~~~g~~~ 444 (456)
T cd07110 365 GPVLCVRSFATEDEAIALANDSEYGLAAAVISRDAERCDRVAEALEAGIVWINCSQPCFPQAPWGGYKRSGIGRELGEWG 444 (456)
T ss_pred CCeEEEEecCCHHHHHHHHhCCCCCceEEEECCCHHHHHHHHHhCCcceEEECCCCCCCCCCCCCCcccccCCccchHHH
Confidence 99999999999999999999999999999999999999999999999999999987777789999999999999999999
Q ss_pred HHhhheeeEEE
Q 015042 395 LYKYLQIKSVV 405 (414)
Q Consensus 395 ~~~~~~~k~i~ 405 (414)
+++||+.|+|+
T Consensus 445 l~~~~~~k~i~ 455 (456)
T cd07110 445 LDNYLEVKQIT 455 (456)
T ss_pred HHHhcceeEEe
Confidence 99999999985
|
Present in this CD are the Arabidopsis betaine aldehyde dehydrogenase (BADH) 1 (chloroplast) and 2 (mitochondria), also known as, aldehyde dehydrogenase family 10 member A8 and aldehyde dehydrogenase family 10 member A9, respectively, and are putative dehydration- and salt-inducible BADHs (EC 1.2.1.8) that catalyze the oxidation of betaine aldehyde to the compatible solute glycine betaine. |
| >cd07151 ALDH_HBenzADH NADP+-dependent p-hydroxybenzaldehyde dehydrogenase-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.6e-87 Score=675.80 Aligned_cols=402 Identities=40% Similarity=0.646 Sum_probs=378.4
Q ss_pred CHHHHHHHHHhHHHHHHHHHHhcCCChHHHhhchHHHHHHHHHHHHHhhhhhcCcccccC-CCcccceeecCCceEEEEc
Q 015042 1 MWKFADLIEEHVEELAALDALDAGKVYLRAKTAEIPGAAEFLRFFAGAADKIHGEVLKMS-SELQGYTLREPVGVVGHII 79 (414)
Q Consensus 1 L~~~a~~l~~~~~~l~~~~~~etGk~~~e~~~~ei~~~~~~l~~~a~~~~~~~~~~~~~~-~~~~~~~~~~P~Gvv~~i~ 79 (414)
|+++++.|++|+++|++++++|+|||..++. .|+..+++.+++++.+.++..+...+.. .+...+.+++|+|||++|+
T Consensus 60 L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a~-~Ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~I~ 138 (465)
T cd07151 60 LEKAAQILEERRDEIVEWLIRESGSTRIKAN-IEWGAAMAITREAATFPLRMEGRILPSDVPGKENRVYREPLGVVGVIS 138 (465)
T ss_pred HHHHHHHHHHhHHHHHHHHHHHcCCCHHHHH-HHHHHHHHHHHHHHHhHHHhcCccccCCCCCceeEEEEecceEEEEEC
Confidence 5789999999999999999999999999764 5999999999999988766654443322 3556788999999999999
Q ss_pred CCccchHHHHHhHHHHHhhCCeEEeecCCCChHHH-HHHHHHHHHcCCCCCcEEEEeCCchhhHHHhhhCCCccEEEEeC
Q 015042 80 PWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLTA-LYYAHLAKLAGIPDGVLNVVPGFGPTAGAAICSHMDIDYVCFTG 158 (414)
Q Consensus 80 p~n~P~~~~~~~~~~aLaaGN~vv~kps~~~~~~~-~~l~~~l~~aG~p~g~v~~v~~~~~~~~~~l~~~~~v~~v~~tG 158 (414)
|||||++..++++++||++||+||+|||+.+|.++ ..+.+++.++|+|+|+++++++++.+.++.|+.||.++.|.|||
T Consensus 139 p~N~P~~~~~~~~~~ALaaGN~Vi~Kps~~~p~~~~~~l~~~l~~aG~P~gvv~~v~g~~~~~~~~l~~~~~v~~v~fTG 218 (465)
T cd07151 139 PWNFPLHLSMRSVAPALALGNAVVLKPASDTPITGGLLLAKIFEEAGLPKGVLNVVVGAGSEIGDAFVEHPVPRLISFTG 218 (465)
T ss_pred CCChHHHHHHHHHHHHHHcCCEEEEECCCCCcHhHHHHHHHHHHHcCcCccceEEEecCchhhHHHHhcCCCCCEEEEEC
Confidence 99999999999999999999999999999999996 68999999999999999999987778899999999999999999
Q ss_pred CcHHHHHHHHHHHhcccceeEEEcCCCCCceEcCCCCHHHHHHHHHHHhhccCCCCcccCceEEEeCchHHHHHHHHHHH
Q 015042 159 STDVGRLVMQAAAASNLKQVSLELGGKSPLLIFDDADLDTAADVALLGNLYNKGEICVASSRVFVQEGIYDKFEKKLLEK 238 (414)
Q Consensus 159 s~~~g~~i~~~~a~~~~~~~~~e~gg~~~~iV~~dadl~~aa~~i~~~~~~~~Gq~C~a~~~i~V~~~i~d~f~~~l~~~ 238 (414)
|+.+|+.|++.++ ++++|+++|+|||||+||++|||++.|++.+++++|.|+||.|+++++||||+++||+|+++|++.
T Consensus 219 s~~~g~~i~~~aa-~~~~~~~lElGGk~p~iV~~daDl~~Aa~~i~~~~f~~~GQ~C~a~~rv~V~~~i~~~f~~~l~~~ 297 (465)
T cd07151 219 STPVGRHIGELAG-RHLKKVALELGGNNPFVVLEDADIDAAVNAAVFGKFLHQGQICMAINRIIVHEDVYDEFVEKFVER 297 (465)
T ss_pred CHHHHHHHHHHHH-hcCCcEEEECCCCCeEEECCCCCHHHHHHHHHHHHHhcCCCCCcCCcEEEEeHHHHHHHHHHHHHH
Confidence 9999999999988 889999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhhcccCCCCCCCCcccccCCHHHHHHHHHHHHHHHHcCCEEEeCCcccCCCCceeeeEEEeeCCCcccccccceecceE
Q 015042 239 AKAWLVGDPFDPTVRQGPQISERHFDRILSYIEHGKREGATLLTGGKPIGDKGYYIEPTIFTNVKEDMIIAKEEIFGPVM 318 (414)
Q Consensus 239 ~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl 318 (414)
++++++|+|.++++.+||++++.+++++++++++++.+|+++++||.. .|+|++|||+.++++++.+++||+||||+
T Consensus 298 ~~~~~~g~p~~~~~~~gpli~~~~~~~v~~~v~~a~~~ga~vl~gg~~---~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl 374 (465)
T cd07151 298 VKALPYGDPSDPDTVVGPLINESQVDGLLDKIEQAVEEGATLLVGGEA---EGNVLEPTVLSDVTNDMEIAREEIFGPVA 374 (465)
T ss_pred HHhCCCCCCCCCCCCcCCCcCHHHHHHHHHHHHHHHhCCCEEEecCCc---CCEEEccEEEeCCCCCCchhhCcCcCCeE
Confidence 999999999999999999999999999999999999999999999865 58999999999999999999999999999
Q ss_pred EEEeeCCHHHHHHHhhcCCCCceEEEecCCHHHHHHHHHhcceeEEEEcCcCCC-CCCCCcccCCCCCCCccchHHHHHh
Q 015042 319 ALMKFKTVEEAIKSANNTQYGLAAGIVTKDLNVANTVSRSIRAGIIWINCYFGF-SMDCPYGGYKMSGFGREYGLESLYK 397 (414)
Q Consensus 319 ~v~~~~~~~eai~~~n~~~~gl~~sv~s~d~~~~~~~~~~l~~g~v~iN~~~~~-~~~~p~gG~~~sG~g~~~g~~~~~~ 397 (414)
+|++|+|+|||++++|+++|||++||||+|.++++++++++++|.|+||+++.. .+.+||||+|.||+|+++|++++++
T Consensus 375 ~v~~~~~~~eai~~~n~~~~gL~a~v~t~d~~~a~~~~~~l~~G~v~iN~~~~~~~~~~PfGG~k~SG~G~~~g~~~l~~ 454 (465)
T cd07151 375 PIIKADDEEEALELANDTEYGLSGAVFTSDLERGVQFARRIDAGMTHINDQPVNDEPHVPFGGEKNSGLGRFNGEWALEE 454 (465)
T ss_pred EEEeeCCHHHHHHHHhCCCccceEEEECCCHHHHHHHHHhCCcCeEEECCCCCCCCCCCCCCCcccccCCcCChHHHHHH
Confidence 999999999999999999999999999999999999999999999999998764 3679999999999999999999999
Q ss_pred hheeeEEEee
Q 015042 398 YLQIKSVVTP 407 (414)
Q Consensus 398 ~~~~k~i~~~ 407 (414)
||+.|+++++
T Consensus 455 ~t~~k~~~~~ 464 (465)
T cd07151 455 FTTDKWISVQ 464 (465)
T ss_pred hhceEEEEec
Confidence 9999998764
|
NADP+-dependent, p-hydroxybenzaldehyde dehydrogenase (PchA, HBenzADH) which catalyzes oxidation of p-hydroxybenzaldehyde to p-hydroxybenzoic acid and other related sequences are included in this CD. |
| >cd07090 ALDH_F9_TMBADH NAD+-dependent 4-trimethylaminobutyraldehyde dehydrogenase, ALDH family 9A1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-86 Score=674.61 Aligned_cols=405 Identities=45% Similarity=0.801 Sum_probs=382.0
Q ss_pred CHHHHHHHHHhHHHHHHHHHHhcCCChHHHhhchHHHHHHHHHHHHHhhhhhcCcccccCCCcccceeecCCceEEEEcC
Q 015042 1 MWKFADLIEEHVEELAALDALDAGKVYLRAKTAEIPGAAEFLRFFAGAADKIHGEVLKMSSELQGYTLREPVGVVGHIIP 80 (414)
Q Consensus 1 L~~~a~~l~~~~~~l~~~~~~etGk~~~e~~~~ei~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p 80 (414)
|+++++.|++++++|++++++|+||+..++ ..|+..+++.+++++.+.++..++..+...+...+.+++|+|||++|+|
T Consensus 47 L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a-~~ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVV~~I~p 125 (457)
T cd07090 47 LRKAADLLRERNDEIARLETIDNGKPIEEA-RVDIDSSADCLEYYAGLAPTLSGEHVPLPGGSFAYTRREPLGVCAGIGA 125 (457)
T ss_pred HHHHHHHHHHhHHHHHHHHHHHcCCCHHHH-HHHHHHHHHHHHHHHHHHHHhCCeeeccCCCceEEEEEeecceEEEECC
Confidence 578999999999999999999999999875 5699999999999998887765544433345567889999999999999
Q ss_pred CccchHHHHHhHHHHHhhCCeEEeecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhhHHHhhhCCCccEEEEeCCc
Q 015042 81 WNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLTALYYAHLAKLAGIPDGVLNVVPGFGPTAGAAICSHMDIDYVCFTGST 160 (414)
Q Consensus 81 ~n~P~~~~~~~~~~aLaaGN~vv~kps~~~~~~~~~l~~~l~~aG~p~g~v~~v~~~~~~~~~~l~~~~~v~~v~~tGs~ 160 (414)
||||+...++++++||++||+||+|||+.+|.++..+.+++.++|+|+|+++++++++ +.++.|+.|+++|.|.||||+
T Consensus 126 ~N~P~~~~~~~~~~ALaaGN~Vv~Kps~~~~~~~~~l~~~~~~aGlP~g~~~~v~g~~-~~~~~l~~~~~v~~v~fTGs~ 204 (457)
T cd07090 126 WNYPIQIASWKSAPALACGNAMVYKPSPFTPLTALLLAEILTEAGLPDGVFNVVQGGG-ETGQLLCEHPDVAKVSFTGSV 204 (457)
T ss_pred CccHHHHHHHHHHHHHhcCCeeeecCCCcCcHHHHHHHHHHHHcCCCcccEEEEeCCh-hhHHHHhcCCCCCEEEEECcH
Confidence 9999999999999999999999999999999999999999999999999999999844 688999999999999999999
Q ss_pred HHHHHHHHHHHhcccceeEEEcCCCCCceEcCCCCHHHHHHHHHHHhhccCCCCcccCceEEEeCchHHHHHHHHHHHHh
Q 015042 161 DVGRLVMQAAAASNLKQVSLELGGKSPLLIFDDADLDTAADVALLGNLYNKGEICVASSRVFVQEGIYDKFEKKLLEKAK 240 (414)
Q Consensus 161 ~~g~~i~~~~a~~~~~~~~~e~gg~~~~iV~~dadl~~aa~~i~~~~~~~~Gq~C~a~~~i~V~~~i~d~f~~~l~~~~~ 240 (414)
.+|+.|.+.++ ++++|+++|+|||||+||++|||++.|++.+++++|.++||.|+++++||||++++|+|+++|+++++
T Consensus 205 ~~g~~i~~~aa-~~~~~~~lelgG~~p~iV~~dAdl~~Aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~ 283 (457)
T cd07090 205 PTGKKVMSAAA-KGIKHVTLELGGKSPLIIFDDADLENAVNGAMMANFLSQGQVCSNGTRVFVQRSIKDEFTERLVERTK 283 (457)
T ss_pred HHHHHHHHHHh-ccCCceEEecCCCCceEECCCCCHHHHHHHHHHHHHhcCCCCCCCCeEEEEcHHHHHHHHHHHHHHHH
Confidence 99999999988 78999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hcccCCCCCCCCcccccCCHHHHHHHHHHHHHHHHcCCEEEeCCcccC-----CCCceeeeEEEeeCCCcccccccceec
Q 015042 241 AWLVGDPFDPTVRQGPQISERHFDRILSYIEHGKREGATLLTGGKPIG-----DKGYYIEPTIFTNVKEDMIIAKEEIFG 315 (414)
Q Consensus 241 ~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~-----~~g~~~~Ptvl~~~~~~~~~~~~E~fg 315 (414)
++++|+|.++++++||+++..+++++.+++++++..|+++++||.... ++|+|++|||+.+++++|+++++|+||
T Consensus 284 ~~~~g~p~~~~~~~gpli~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~Fg 363 (457)
T cd07090 284 KIRIGDPLDEDTQMGALISEEHLEKVLGYIESAKQEGAKVLCGGERVVPEDGLENGFYVSPCVLTDCTDDMTIVREEIFG 363 (457)
T ss_pred hcCCCCCCCCCCCcccccCHHHHHHHHHHHHHHHHCCCEEEECCCcCcccccCCCCeeECCEEEecCCCCChHHhCCCCC
Confidence 999999999999999999999999999999999999999999997532 358999999999999999999999999
Q ss_pred ceEEEEeeCCHHHHHHHhhcCCCCceEEEecCCHHHHHHHHHhcceeEEEEcCcCCCCCCCCcccCCCCCCCccchHHHH
Q 015042 316 PVMALMKFKTVEEAIKSANNTQYGLAAGIVTKDLNVANTVSRSIRAGIIWINCYFGFSMDCPYGGYKMSGFGREYGLESL 395 (414)
Q Consensus 316 Pvl~v~~~~~~~eai~~~n~~~~gl~~sv~s~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~p~gG~~~sG~g~~~g~~~~ 395 (414)
||++|++|+|.||||+++|+++|||++||||+|.+.++++++++++|.|+||+.....+.+||||+|.||+|+++|++++
T Consensus 364 Pvl~v~~~~~~deai~~~n~~~~gLsa~i~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~pfGG~k~SG~G~~~g~~~~ 443 (457)
T cd07090 364 PVMSILPFDTEEEVIRRANDTTYGLAAGVFTRDLQRAHRVIAQLQAGTCWINTYNISPVEVPFGGYKQSGFGRENGTAAL 443 (457)
T ss_pred CeEEEEEECCHHHHHHHHhCCCcCceEEEEcCCHHHHHHHHHhCCcCeEEECCCCCCCCCCCcCCCccCcCCccchHHHH
Confidence 99999999999999999999999999999999999999999999999999999877777899999999999999999999
Q ss_pred HhhheeeEEEeeC
Q 015042 396 YKYLQIKSVVTPI 408 (414)
Q Consensus 396 ~~~~~~k~i~~~~ 408 (414)
++||+.|+|.++.
T Consensus 444 ~~f~~~k~~~~~~ 456 (457)
T cd07090 444 EHYTQLKTVYVEM 456 (457)
T ss_pred HHHhCeEEEEEeC
Confidence 9999999998764
|
NAD+-dependent, 4-trimethylaminobutyraldehyde dehydrogenase (TMABADH, EC=1.2.1.47), also known as aldehyde dehydrogenase family 9 member A1 (ALDH9A1) in humans, is a cytosolic tetramer which catalyzes the oxidation of gamma-aminobutyraldehyde involved in 4-aminobutyric acid (GABA) biosynthesis and also oxidizes betaine aldehyde (gamma-trimethylaminobutyraldehyde) which is involved in carnitine biosynthesis. |
| >cd07085 ALDH_F6_MMSDH Methylmalonate semialdehyde dehydrogenase and ALDH family members 6A1 and 6B2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-86 Score=677.09 Aligned_cols=404 Identities=37% Similarity=0.565 Sum_probs=377.1
Q ss_pred CHHHHHHHHHhHHHHHHHHHHhcCCChHHHhhchHHHHHHHHHHHHHhhhhhcCccccc-CCCcccceeecCCceEEEEc
Q 015042 1 MWKFADLIEEHVEELAALDALDAGKVYLRAKTAEIPGAAEFLRFFAGAADKIHGEVLKM-SSELQGYTLREPVGVVGHII 79 (414)
Q Consensus 1 L~~~a~~l~~~~~~l~~~~~~etGk~~~e~~~~ei~~~~~~l~~~a~~~~~~~~~~~~~-~~~~~~~~~~~P~Gvv~~i~ 79 (414)
|+++++.|++|+++|++++++|+|||..++ ..|+..+++.+++++...+...++..+. ..+...+.+++|+|||++|+
T Consensus 66 L~~~a~~l~~~~~el~~~~~~e~Gk~~~~a-~~ev~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~P~GVv~~I~ 144 (478)
T cd07085 66 MFKFRQLLEENLDELARLITLEHGKTLADA-RGDVLRGLEVVEFACSIPHLLKGEYLENVARGIDTYSYRQPLGVVAGIT 144 (478)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHcCCCHHHH-HHHHHHHHHHHHHHHHHHHHhCCeecccCCCCceeEEEEecceEEEEEC
Confidence 578999999999999999999999999976 4699999999999988766555544332 12445789999999999999
Q ss_pred CCccchHHHHHhHHHHHhhCCeEEeecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhhHHHhhhCCCccEEEEeCC
Q 015042 80 PWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLTALYYAHLAKLAGIPDGVLNVVPGFGPTAGAAICSHMDIDYVCFTGS 159 (414)
Q Consensus 80 p~n~P~~~~~~~~~~aLaaGN~vv~kps~~~~~~~~~l~~~l~~aG~p~g~v~~v~~~~~~~~~~l~~~~~v~~v~~tGs 159 (414)
|||||+...++++++||++||+||+|||+.+|.++..+.++|.++|+|+|+++++++ +.+.++.|+.||++|.|.||||
T Consensus 145 p~N~P~~~~~~~i~~ALaaGN~VvlKps~~tp~~~~~l~~~l~~aGlP~gvv~~v~g-~~~~~~~L~~~~~v~~V~fTGs 223 (478)
T cd07085 145 PFNFPAMIPLWMFPMAIACGNTFVLKPSERVPGAAMRLAELLQEAGLPDGVLNVVHG-GKEAVNALLDHPDIKAVSFVGS 223 (478)
T ss_pred CCChHHHHHHHHHHHHHhcCCEEEEECCCcCcHHHHHHHHHHHHhCCCCCcEEEEec-CHHHHHHHhcCCCcCEEEEECC
Confidence 999999999999999999999999999999999999999999999999999999998 5578899999999999999999
Q ss_pred cHHHHHHHHHHHhcccceeEEEcCCCCCceEcCCCCHHHHHHHHHHHhhccCCCCcccCceEEEeCchHHHHHHHHHHHH
Q 015042 160 TDVGRLVMQAAAASNLKQVSLELGGKSPLLIFDDADLDTAADVALLGNLYNKGEICVASSRVFVQEGIYDKFEKKLLEKA 239 (414)
Q Consensus 160 ~~~g~~i~~~~a~~~~~~~~~e~gg~~~~iV~~dadl~~aa~~i~~~~~~~~Gq~C~a~~~i~V~~~i~d~f~~~l~~~~ 239 (414)
+.+|+.|++.++ ++++|+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||++++|+|+++|++++
T Consensus 224 ~~~g~~i~~~aa-~~~~~~~lElgGk~p~iV~~dADl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~~~f~~~L~~~~ 302 (478)
T cd07085 224 TPVGEYIYERAA-ANGKRVQALGGAKNHAVVMPDADLEQTANALVGAAFGAAGQRCMALSVAVAVGDEADEWIPKLVERA 302 (478)
T ss_pred HHHHHHHHHHHh-hcCCcEEecCCCCCceEECCCCCHHHHHHHHHHHHHhcCCCCCCCCeEEEEeHHHHHHHHHHHHHHH
Confidence 999999999887 8899999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhcccCCCCCCCCcccccCCHHHHHHHHHHHHHHHHcCCEEEeCCcccC----CCCceeeeEEEeeCCCcccccccceec
Q 015042 240 KAWLVGDPFDPTVRQGPQISERHFDRILSYIEHGKREGATLLTGGKPIG----DKGYYIEPTIFTNVKEDMIIAKEEIFG 315 (414)
Q Consensus 240 ~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~----~~g~~~~Ptvl~~~~~~~~~~~~E~fg 315 (414)
+++++|+|.++++++||++++.+++++.+++++++++|+++++||.... .+|+|+.|||+.+++++|.+++||+||
T Consensus 303 ~~l~~G~p~~~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~~l~gg~~~~~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~Fg 382 (478)
T cd07085 303 KKLKVGAGDDPGADMGPVISPAAKERIEGLIESGVEEGAKLVLDGRGVKVPGYENGNFVGPTILDNVTPDMKIYKEEIFG 382 (478)
T ss_pred HhCCCCCCCCCCCCcCCCcCHHHHHHHHHHHHHHHHCCCEEEeCCCcCCCCcCCCCeEEcCEEEecCCCCChhhhCcCcC
Confidence 9999999999999999999999999999999999999999999997532 368999999999999999999999999
Q ss_pred ceEEEEeeCCHHHHHHHhhcCCCCceEEEecCCHHHHHHHHHhcceeEEEEcCcCCC-CCCCCcccCCCCCCC--ccchH
Q 015042 316 PVMALMKFKTVEEAIKSANNTQYGLAAGIVTKDLNVANTVSRSIRAGIIWINCYFGF-SMDCPYGGYKMSGFG--REYGL 392 (414)
Q Consensus 316 Pvl~v~~~~~~~eai~~~n~~~~gl~~sv~s~d~~~~~~~~~~l~~g~v~iN~~~~~-~~~~p~gG~~~sG~g--~~~g~ 392 (414)
||++|++|+|++|||+++|+++|||++||||+|.++++++++++++|.|+||++... .+.+||||+|.||+| +++|+
T Consensus 383 Pvl~v~~~~~~deai~~~N~~~~gL~a~v~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~~PfgG~k~SG~G~~~~~g~ 462 (478)
T cd07085 383 PVLSIVRVDTLDEAIAIINANPYGNGAAIFTRSGAAARKFQREVDAGMVGINVPIPVPLAFFSFGGWKGSFFGDLHFYGK 462 (478)
T ss_pred CeEEEEEeCCHHHHHHHHhCCCCCceEEEECCCHHHHHHHHHhCCcceEEEcCCCCCCCCCCCCCCcccccCCCCcCChH
Confidence 999999999999999999999999999999999999999999999999999987543 367899999999999 47899
Q ss_pred HHHHhhheeeEEEee
Q 015042 393 ESLYKYLQIKSVVTP 407 (414)
Q Consensus 393 ~~~~~~~~~k~i~~~ 407 (414)
+|+++||++|+|+.+
T Consensus 463 ~~~~~~~~~k~v~~~ 477 (478)
T cd07085 463 DGVRFYTQTKTVTSR 477 (478)
T ss_pred HHHHHhcceEEEEEe
Confidence 999999999999765
|
Methylmalonate semialdehyde dehydrogenase (MMSDH, EC=1.2.1.27) [acylating] from Bacillus subtilis is involved in valine metabolism and catalyses the NAD+- and CoA-dependent oxidation of methylmalonate semialdehyde into propionyl-CoA. Mitochondrial human MMSDH ALDH6A1 and Arabidopsis MMSDH ALDH6B2 are also present in this CD. |
| >cd07086 ALDH_F7_AASADH-like NAD+-dependent alpha-aminoadipic semialdehyde dehydrogenase and related proteins | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-86 Score=676.68 Aligned_cols=405 Identities=33% Similarity=0.540 Sum_probs=380.0
Q ss_pred CHHHHHHHHHhHHHHHHHHHHhcCCChHHHhhchHHHHHHHHHHHHHhhhhhcCcccccC-CCcccceeecCCceEEEEc
Q 015042 1 MWKFADLIEEHVEELAALDALDAGKVYLRAKTAEIPGAAEFLRFFAGAADKIHGEVLKMS-SELQGYTLREPVGVVGHII 79 (414)
Q Consensus 1 L~~~a~~l~~~~~~l~~~~~~etGk~~~e~~~~ei~~~~~~l~~~a~~~~~~~~~~~~~~-~~~~~~~~~~P~Gvv~~i~ 79 (414)
|+++++.|++++++|++++++|+|||..++. .|+..+++.+++++...+++.+...+.. .+...+.+++|+|||++|+
T Consensus 63 L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a~-~ev~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~~P~GVv~~I~ 141 (478)
T cd07086 63 VRQIGEALRKKKEALGRLVSLEMGKILPEGL-GEVQEMIDICDYAVGLSRMLYGLTIPSERPGHRLMEQWNPLGVVGVIT 141 (478)
T ss_pred HHHHHHHHHHhHHHHHHHHHHhcCCCHHHHH-HHHHHHHHHHHHHHHHHHHhcCcccccCCCCceEEEEEecceeEEEEC
Confidence 5789999999999999999999999999765 6999999999999988877655443322 2345678999999999999
Q ss_pred CCccchHHHHHhHHHHHhhCCeEEeecCCCChHHHHHHHHHHHHc----CCCCCcEEEEeCCchhhHHHhhhCCCccEEE
Q 015042 80 PWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLTALYYAHLAKLA----GIPDGVLNVVPGFGPTAGAAICSHMDIDYVC 155 (414)
Q Consensus 80 p~n~P~~~~~~~~~~aLaaGN~vv~kps~~~~~~~~~l~~~l~~a----G~p~g~v~~v~~~~~~~~~~l~~~~~v~~v~ 155 (414)
|||||+...++++++||++||+||+|||+.+|.++..+++++.++ |+|+|+++++++++. .++.|..||++|.|.
T Consensus 142 pwN~P~~~~~~~~~~ALaaGN~VIlKps~~~p~~~~~l~~~~~~al~~~glP~gvv~~v~g~~~-~~~~L~~~~~vd~v~ 220 (478)
T cd07086 142 AFNFPVAVPGWNAAIALVCGNTVVWKPSETTPLTAIAVTKILAEVLEKNGLPPGVVNLVTGGGD-GGELLVHDPRVPLVS 220 (478)
T ss_pred CCCcHHHHHHHHHHHHHHcCCeEEEECCCcchHHHHHHHHHHHHhhhccCCCccceEEEecCch-hHHHHhcCCCCCEEE
Confidence 999999999999999999999999999999999999999999998 999999999998554 889999999999999
Q ss_pred EeCCcHHHHHHHHHHHhcccceeEEEcCCCCCceEcCCCCHHHHHHHHHHHhhccCCCCcccCceEEEeCchHHHHHHHH
Q 015042 156 FTGSTDVGRLVMQAAAASNLKQVSLELGGKSPLLIFDDADLDTAADVALLGNLYNKGEICVASSRVFVQEGIYDKFEKKL 235 (414)
Q Consensus 156 ~tGs~~~g~~i~~~~a~~~~~~~~~e~gg~~~~iV~~dadl~~aa~~i~~~~~~~~Gq~C~a~~~i~V~~~i~d~f~~~l 235 (414)
||||+.+|+.|++.++ ++++|+++|+|||||+||++|||++.|++.+++++|.|+||.|+++++||||+++||+|+++|
T Consensus 221 fTGs~~~g~~i~~~aa-~~~~~~~lElGG~~p~iV~~dAdl~~Aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~d~f~~~l 299 (478)
T cd07086 221 FTGSTEVGRRVGETVA-RRFGRVLLELGGNNAIIVMDDADLDLAVRAVLFAAVGTAGQRCTTTRRLIVHESVYDEFLERL 299 (478)
T ss_pred EECcHHHHHHHHHHHh-ccCCcEEeecCCCCcEEEcCCCCHHHHHHHHHHHHHhccCCCCcCCeEEEEcHHHHHHHHHHH
Confidence 9999999999999988 889999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhhcccCCCCCCCCcccccCCHHHHHHHHHHHHHHHHcCCEEEeCCcccCC--CCceeeeEEEeeCCCcccccccce
Q 015042 236 LEKAKAWLVGDPFDPTVRQGPQISERHFDRILSYIEHGKREGATLLTGGKPIGD--KGYYIEPTIFTNVKEDMIIAKEEI 313 (414)
Q Consensus 236 ~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~~--~g~~~~Ptvl~~~~~~~~~~~~E~ 313 (414)
+++++++++|+|.++++++||++++.+++++++++++++++|+++++||..... .|+|++|||+.+++++|.+++||+
T Consensus 300 ~~~~~~~~~g~p~~~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~v~~gg~~~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~ 379 (478)
T cd07086 300 VKAYKQVRIGDPLDEGTLVGPLINQAAVEKYLNAIEIAKSQGGTVLTGGKRIDGGEPGNYVEPTIVTGVTDDARIVQEET 379 (478)
T ss_pred HHHHHhCCcCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCEEEeCCCcCCCCCCCeEEccEEecCCCCCChhhcCCC
Confidence 999999999999999999999999999999999999999999999999976543 589999999999999999999999
Q ss_pred ecceEEEEeeCCHHHHHHHhhcCCCCceEEEecCCHHHHHHHHHh--cceeEEEEcCcCC-CCCCCCcccCCCCCCCccc
Q 015042 314 FGPVMALMKFKTVEEAIKSANNTQYGLAAGIVTKDLNVANTVSRS--IRAGIIWINCYFG-FSMDCPYGGYKMSGFGREY 390 (414)
Q Consensus 314 fgPvl~v~~~~~~~eai~~~n~~~~gl~~sv~s~d~~~~~~~~~~--l~~g~v~iN~~~~-~~~~~p~gG~~~sG~g~~~ 390 (414)
||||++|++|+|+||||+++|+++|||++||||+|.+.+++++++ +++|+|+||++.. ..+.+||||+|.||+|+++
T Consensus 380 FgPVl~v~~~~~~deai~~~n~~~~gL~a~v~t~d~~~a~~~~~~~~~~~G~v~iN~~~~~~~~~~PfgG~~~SG~G~~~ 459 (478)
T cd07086 380 FAPILYVIKFDSLEEAIAINNDVPQGLSSSIFTEDLREAFRWLGPKGSDCGIVNVNIPTSGAEIGGAFGGEKETGGGRES 459 (478)
T ss_pred cCCEEEEEEeCCHHHHHHHHhCCCCcceEEEEcCCHHHHHHHHhcCcccceeEEECCCCCCCCCCCCCCCcccccCCccc
Confidence 999999999999999999999999999999999999999999999 9999999999765 4467999999999999999
Q ss_pred hHHHHHhhheeeEEEeeC
Q 015042 391 GLESLYKYLQIKSVVTPI 408 (414)
Q Consensus 391 g~~~~~~~~~~k~i~~~~ 408 (414)
|.+++++|+++|+|++++
T Consensus 460 g~~~~~~f~~~k~i~~~~ 477 (478)
T cd07086 460 GSDAWKQYMRRSTCTINY 477 (478)
T ss_pred hHHHHHHhhceEEEEEeC
Confidence 999999999999998764
|
ALDH subfamily which includes the NAD+-dependent, alpha-aminoadipic semialdehyde dehydrogenase (AASADH, EC=1.2.1.31), also known as Antiquitin-1, ALDH7A1, ALDH7B or delta-1-piperideine-6-carboxylate dehydrogenase (P6CDH), and other similar sequences, such as the uncharacterized aldehyde dehydrogenase of Candidatus kuenenia AldH (locus CAJ73105). |
| >cd07145 ALDH_LactADH_F420-Bios Methanocaldococcus jannaschii NAD+-dependent lactaldehyde dehydrogenase-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.3e-87 Score=674.74 Aligned_cols=401 Identities=40% Similarity=0.694 Sum_probs=377.3
Q ss_pred CHHHHHHHHHhHHHHHHHHHHhcCCChHHHhhchHHHHHHHHHHHHHhhhhhcCcccccCC-----CcccceeecCCceE
Q 015042 1 MWKFADLIEEHVEELAALDALDAGKVYLRAKTAEIPGAAEFLRFFAGAADKIHGEVLKMSS-----ELQGYTLREPVGVV 75 (414)
Q Consensus 1 L~~~a~~l~~~~~~l~~~~~~etGk~~~e~~~~ei~~~~~~l~~~a~~~~~~~~~~~~~~~-----~~~~~~~~~P~Gvv 75 (414)
|+++++.|++|+++|++++++|+|||..++. .|+..+++.++++++..+.+.+...+.+. +...+.+++|+|||
T Consensus 49 L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a~-~ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv 127 (456)
T cd07145 49 LMKVAELIERRKEELAKLLTIEVGKPIKQSR-VEVERTIRLFKLAAEEAKVLRGETIPVDAYEYNERRIAFTVREPIGVV 127 (456)
T ss_pred HHHHHHHHHHhHHHHHHHHHHhcCCCHHHHH-HHHHHHHHHHHHHHHHHHHhcCccccCccccccCCceeEEEEecceeE
Confidence 5789999999999999999999999999865 59999999999999877655554332221 23457889999999
Q ss_pred EEEcCCccchHHHHHhHHHHHhhCCeEEeecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhhHHHhhhCCCccEEE
Q 015042 76 GHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLTALYYAHLAKLAGIPDGVLNVVPGFGPTAGAAICSHMDIDYVC 155 (414)
Q Consensus 76 ~~i~p~n~P~~~~~~~~~~aLaaGN~vv~kps~~~~~~~~~l~~~l~~aG~p~g~v~~v~~~~~~~~~~l~~~~~v~~v~ 155 (414)
++|+|||||+...++++++||++||+||+|||+.+|.++..+.+++.++|+|+|+++++++++.+.++.|+.||++|.|.
T Consensus 128 ~~I~p~N~P~~~~~~~~~~ALaaGN~VV~Kps~~~p~~~~~l~~~~~~ag~p~g~~~~v~g~~~~~~~~l~~~~~v~~V~ 207 (456)
T cd07145 128 GAITPFNFPANLFAHKIAPAIAVGNSVVVKPSSNTPLTAIELAKILEEAGLPPGVINVVTGYGSEVGDEIVTNPKVNMIS 207 (456)
T ss_pred EEECCCChHHHHHHHHHHHHHHcCCEEEEECCccchHHHHHHHHHHHHcCCCcccEEEEeCCCchHHHHHhcCCCCCEEE
Confidence 99999999999999999999999999999999999999999999999999999999999997778899999999999999
Q ss_pred EeCCcHHHHHHHHHHHhcccceeEEEcCCCCCceEcCCCCHHHHHHHHHHHhhccCCCCcccCceEEEeCchHHHHHHHH
Q 015042 156 FTGSTDVGRLVMQAAAASNLKQVSLELGGKSPLLIFDDADLDTAADVALLGNLYNKGEICVASSRVFVQEGIYDKFEKKL 235 (414)
Q Consensus 156 ~tGs~~~g~~i~~~~a~~~~~~~~~e~gg~~~~iV~~dadl~~aa~~i~~~~~~~~Gq~C~a~~~i~V~~~i~d~f~~~l 235 (414)
||||+.+|+.|.+.++ ++++|+++|+|||||+||++|||++.|++.+++++|.|+||.|+++++||||++++|+|+++|
T Consensus 208 fTGs~~~g~~i~~~aa-~~~~~v~lElgG~n~~iV~~dAdl~~aa~~i~~~~f~~~GQ~C~a~~rv~V~~~i~d~f~~~l 286 (456)
T cd07145 208 FTGSTAVGLLIASKAG-GTGKKVALELGGSDPMIVLKDADLERAVSIAVRGRFENAGQVCNAVKRILVEEEVYDKFLKLL 286 (456)
T ss_pred EECCHHHHHHHHHHHh-hcCCceEEecCCCCeeEECCCCCHHHHHHHHHHHHHhccCCCCccCeeEEEcHHHHHHHHHHH
Confidence 9999999999999988 889999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhhcccCCCCCCCCcccccCCHHHHHHHHHHHHHHHHcCCEEEeCCcccCCCCceeeeEEEeeCCCcccccccceec
Q 015042 236 LEKAKAWLVGDPFDPTVRQGPQISERHFDRILSYIEHGKREGATLLTGGKPIGDKGYYIEPTIFTNVKEDMIIAKEEIFG 315 (414)
Q Consensus 236 ~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fg 315 (414)
+++++++++|+|.++++++||+++..+++++++++++++++|+++++||... .|+|++|||+.+++++|.+++||+||
T Consensus 287 ~~~~~~~~~g~p~~~~~~~gpli~~~~~~~~~~~i~~a~~~ga~vl~gg~~~--~g~~~~Ptvl~~~~~~~~i~~~E~fg 364 (456)
T cd07145 287 VEKVKKLKVGDPLDESTDLGPLISPEAVERMENLVNDAVEKGGKILYGGKRD--EGSFFPPTVLENDTPDMIVMKEEVFG 364 (456)
T ss_pred HHHHhcCCcCCCCCCCCCcCCCcCHHHHHHHHHHHHHHHHCCCEEEeCCCCC--CCeEECCEeecCCCCCChHhhCCCCC
Confidence 9999999999999999999999999999999999999999999999999764 38999999999999999999999999
Q ss_pred ceEEEEeeCCHHHHHHHhhcCCCCceEEEecCCHHHHHHHHHhcceeEEEEcCcCCCC-CCCCcccCCCCCCCccchHHH
Q 015042 316 PVMALMKFKTVEEAIKSANNTQYGLAAGIVTKDLNVANTVSRSIRAGIIWINCYFGFS-MDCPYGGYKMSGFGREYGLES 394 (414)
Q Consensus 316 Pvl~v~~~~~~~eai~~~n~~~~gl~~sv~s~d~~~~~~~~~~l~~g~v~iN~~~~~~-~~~p~gG~~~sG~g~~~g~~~ 394 (414)
||++|++|+|++|||+++|++++||++||||+|.+.++++++++++|+|+||+..... +.+||||+|.||+|+++|++|
T Consensus 365 Pvl~v~~~~~~~eai~~~n~~~~gL~~~v~t~d~~~~~~~~~~~~~g~v~vN~~~~~~~~~~pfgG~~~SG~G~~~g~~~ 444 (456)
T cd07145 365 PVLPIAKVKDDEEAVEIANSTEYGLQASVFTNDINRALKVARELEAGGVVINDSTRFRWDNLPFGGFKKSGIGREGVRYT 444 (456)
T ss_pred ceEEEEEECCHHHHHHHHhCCCCCceEEEECCCHHHHHHHHHhCCcceEEECCCCCCCCCCCCCCCcccccCCcCchHHH
Confidence 9999999999999999999999999999999999999999999999999999876543 579999999999999999999
Q ss_pred HHhhheeeEEE
Q 015042 395 LYKYLQIKSVV 405 (414)
Q Consensus 395 ~~~~~~~k~i~ 405 (414)
+++|++.|+|.
T Consensus 445 l~~f~~~k~v~ 455 (456)
T cd07145 445 MLEMTEEKTIV 455 (456)
T ss_pred HHHhhceeEEe
Confidence 99999999985
|
NAD+-dependent, lactaldehyde dehydrogenase (EC=1.2.1.22) involved the biosynthesis of coenzyme F(420) in Methanocaldococcus jannaschii through the oxidation of lactaldehyde to lactate and generation of NAPH, and similar sequences are included in this CD. |
| >cd07112 ALDH_GABALDH-PuuC Escherichia coli NADP+-dependent gamma-glutamyl-gamma-aminobutyraldehyde dehydrogenase PuuC-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.3e-87 Score=674.60 Aligned_cols=405 Identities=50% Similarity=0.859 Sum_probs=381.2
Q ss_pred CHHHHHHHHHhHHHHHHHHHHhcCCChHHHhhchHHHHHHHHHHHHHhhhhhcCcccccCCCcccceeecCCceEEEEcC
Q 015042 1 MWKFADLIEEHVEELAALDALDAGKVYLRAKTAEIPGAAEFLRFFAGAADKIHGEVLKMSSELQGYTLREPVGVVGHIIP 80 (414)
Q Consensus 1 L~~~a~~l~~~~~~l~~~~~~etGk~~~e~~~~ei~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p 80 (414)
|+++++.|++|+++|++++++|+|||..++...|+..+++.+++++...++..+...+...+...+.+++|+|||++|+|
T Consensus 54 L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GvV~~i~p 133 (462)
T cd07112 54 LLRLADLIEAHRDELALLETLDMGKPISDALAVDVPSAANTFRWYAEAIDKVYGEVAPTGPDALALITREPLGVVGAVVP 133 (462)
T ss_pred HHHHHHHHHHhHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHHHHHHHHHhcCceecCCCCeEEEEEEeeeeeEEEECC
Confidence 57899999999999999999999999998655699999999999999887765543332234456789999999999999
Q ss_pred CccchHHHHHhHHHHHhhCCeEEeecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhhHHHhhhCCCccEEEEeCCc
Q 015042 81 WNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLTALYYAHLAKLAGIPDGVLNVVPGFGPTAGAAICSHMDIDYVCFTGST 160 (414)
Q Consensus 81 ~n~P~~~~~~~~~~aLaaGN~vv~kps~~~~~~~~~l~~~l~~aG~p~g~v~~v~~~~~~~~~~l~~~~~v~~v~~tGs~ 160 (414)
||||+...++++++||++||+||+|||+.+|.++..+.++|.++|+|+|+++++++++.+.++.|+.|+++|.|.||||+
T Consensus 134 ~N~P~~~~~~~~~~ALaaGN~Vv~Kps~~~p~~~~~l~~~~~~aGlP~g~v~~v~g~~~~~~~~l~~~~~v~~V~fTGs~ 213 (462)
T cd07112 134 WNFPLLMAAWKIAPALAAGNSVVLKPAEQSPLTALRLAELALEAGLPAGVLNVVPGFGHTAGEALGLHMDVDALAFTGST 213 (462)
T ss_pred CchHHHHHHHHHHHHHHcCCeeeeeCCCCCCHHHHHHHHHHHhcCCCCCcEEEEeCCCchHHHHHhcCCCcCEEEEECCH
Confidence 99999999999999999999999999999999999999999999999999999999777889999999999999999999
Q ss_pred HHHHHHHHHHHhcccceeEEEcCCCCCceEcCCC-CHHHHHHHHHHHhhccCCCCcccCceEEEeCchHHHHHHHHHHHH
Q 015042 161 DVGRLVMQAAAASNLKQVSLELGGKSPLLIFDDA-DLDTAADVALLGNLYNKGEICVASSRVFVQEGIYDKFEKKLLEKA 239 (414)
Q Consensus 161 ~~g~~i~~~~a~~~~~~~~~e~gg~~~~iV~~da-dl~~aa~~i~~~~~~~~Gq~C~a~~~i~V~~~i~d~f~~~l~~~~ 239 (414)
.+|+.|++.++.++++|+++|+||+||+||++|+ |++.|++.+++++|.|+||.|+++++||||++++|+|+++|++++
T Consensus 214 ~~g~~i~~~aa~~~~~~~~lelgG~n~~iV~~da~dl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~v~~~f~~~l~~~~ 293 (462)
T cd07112 214 EVGRRFLEYSGQSNLKRVWLECGGKSPNIVFADAPDLDAAAEAAAAGIFWNQGEVCSAGSRLLVHESIKDEFLEKVVAAA 293 (462)
T ss_pred HHHHHHHHHHHHhcCCEEEecCCCCCeEEECCCCcCHHHHHHHHHHHHHhccCCCCCCCeeEEEcHHHHHHHHHHHHHHH
Confidence 9999999988744789999999999999999999 999999999999999999999999999999999999999999999
Q ss_pred hhcccCCCCCCCCcccccCCHHHHHHHHHHHHHHHHcCCEEEeCCcccC--CCCceeeeEEEeeCCCcccccccceecce
Q 015042 240 KAWLVGDPFDPTVRQGPQISERHFDRILSYIEHGKREGATLLTGGKPIG--DKGYYIEPTIFTNVKEDMIIAKEEIFGPV 317 (414)
Q Consensus 240 ~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~--~~g~~~~Ptvl~~~~~~~~~~~~E~fgPv 317 (414)
+++++|+|.++++++||+++..+++++++++++++++|+++++||.... ..|+|++|||+.++++++.+++||+||||
T Consensus 294 ~~~~~g~p~~~~~~~gpli~~~~~~~v~~~v~~a~~~Ga~v~~gg~~~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~fgPv 373 (462)
T cd07112 294 REWKPGDPLDPATRMGALVSEAHFDKVLGYIESGKAEGARLVAGGKRVLTETGGFFVEPTVFDGVTPDMRIAREEIFGPV 373 (462)
T ss_pred hcCCcCCCCCCCCCCCCCcCHHHHHHHHHHHHHHHHCCCEEEeCCccCCCCCCCeEEeeEEecCCCCCChHHhCCCCCce
Confidence 9999999999999999999999999999999999999999999987642 25889999999999999999999999999
Q ss_pred EEEEeeCCHHHHHHHhhcCCCCceEEEecCCHHHHHHHHHhcceeEEEEcCcCCCCCCCCcccCCCCCCCccchHHHHHh
Q 015042 318 MALMKFKTVEEAIKSANNTQYGLAAGIVTKDLNVANTVSRSIRAGIIWINCYFGFSMDCPYGGYKMSGFGREYGLESLYK 397 (414)
Q Consensus 318 l~v~~~~~~~eai~~~n~~~~gl~~sv~s~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~p~gG~~~sG~g~~~g~~~~~~ 397 (414)
++|++|+|.+|||+++|+++|||++||||+|.+.+.++++++++|+|+||++....+.+||||+|.||+|+++|++|+++
T Consensus 374 l~v~~~~~~~eai~~~n~~~~gL~~~i~t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~PfgG~k~SG~G~~~g~~~~~~ 453 (462)
T cd07112 374 LSVITFDSEEEAVALANDSVYGLAASVWTSDLSRAHRVARRLRAGTVWVNCFDEGDITTPFGGFKQSGNGRDKSLHALDK 453 (462)
T ss_pred EEEEEeCCHHHHHHHHhCCCccceEEEEcCCHHHHHHHHHhcCcceEEECCCCCCCCCCCCCCcccccCCccchHHHHHH
Confidence 99999999999999999999999999999999999999999999999999987777889999999999999999999999
Q ss_pred hheeeEEE
Q 015042 398 YLQIKSVV 405 (414)
Q Consensus 398 ~~~~k~i~ 405 (414)
|+++|+|+
T Consensus 454 f~~~k~i~ 461 (462)
T cd07112 454 YTELKTTW 461 (462)
T ss_pred HhceeEEE
Confidence 99999985
|
NADP+-dependent, gamma-glutamyl-gamma-aminobutyraldehyde dehydrogenase (GABALDH) PuuC of Escherichia coli which catalyzes the conversion of putrescine to 4-aminobutanoate and other similar sequences are present in this CD. |
| >cd07109 ALDH_AAS00426 Uncharacterized Saccharopolyspora spinosa aldehyde dehydrogenase (AAS00426)-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-86 Score=672.79 Aligned_cols=402 Identities=46% Similarity=0.788 Sum_probs=378.7
Q ss_pred CHHHHHHHHHhHHHHHHHHHHhcCCChHHHhhchHHHHHHHHHHHHHhhhhhcCcccccCCCcccceeecCCceEEEEcC
Q 015042 1 MWKFADLIEEHVEELAALDALDAGKVYLRAKTAEIPGAAEFLRFFAGAADKIHGEVLKMSSELQGYTLREPVGVVGHIIP 80 (414)
Q Consensus 1 L~~~a~~l~~~~~~l~~~~~~etGk~~~e~~~~ei~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p 80 (414)
|+++++.|++|+++|++++++|+|||..++. .|+..+++.+++++.+.++..+...+...+...+.+++|+|||++|+|
T Consensus 48 L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~-~ev~~~~~~l~~~~~~~~~~~g~~~~~~~~~~~~~~~~P~GVv~~I~P 126 (454)
T cd07109 48 LLRIARLIREHADELARLESLDTGKPLTQAR-ADVEAAARYFEYYGGAADKLHGETIPLGPGYFVYTVREPHGVTGHIIP 126 (454)
T ss_pred HHHHHHHHHhHHHHHHHHHHHHcCCCHHHHH-HHHHHHHHHHHHHHHHHHHhcCcccccCCCceEEEEEeeeeEEEEECC
Confidence 5789999999999999999999999999764 699999999999998877765544443345567899999999999999
Q ss_pred CccchHHHHHhHHHHHhhCCeEEeecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhhHHHhhhCCCccEEEEeCCc
Q 015042 81 WNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLTALYYAHLAKLAGIPDGVLNVVPGFGPTAGAAICSHMDIDYVCFTGST 160 (414)
Q Consensus 81 ~n~P~~~~~~~~~~aLaaGN~vv~kps~~~~~~~~~l~~~l~~aG~p~g~v~~v~~~~~~~~~~l~~~~~v~~v~~tGs~ 160 (414)
||||++..++++++||++||+||+|||+.+|.++..+.+++.++|+|+|+++++++.+.+.++.|+.|+++|.|.||||+
T Consensus 127 ~N~P~~~~~~~~~~ALaaGN~VvlKps~~~p~~~~~l~~~~~~aGlP~gv~~~v~g~~~~~~~~L~~~~~v~~v~ftGs~ 206 (454)
T cd07109 127 WNYPLQITGRSVAPALAAGNAVVVKPAEDAPLTALRLAELAEEAGLPAGALNVVTGLGAEAGAALVAHPGVDHISFTGSV 206 (454)
T ss_pred CchHHHHHHHHHHHHHHcCCEEEEECCCCChHHHHHHHHHHHHcCcCccceEEEecCchHHHHHHhcCCCCCEEEEECCH
Confidence 99999999999999999999999999999999999999999999999999999998777889999999999999999999
Q ss_pred HHHHHHHHHHHhcccceeEEEcCCCCCceEcCCCCHHHHHHHHHHHhhccCCCCcccCceEEEeCchHHHHHHHHHHHHh
Q 015042 161 DVGRLVMQAAAASNLKQVSLELGGKSPLLIFDDADLDTAADVALLGNLYNKGEICVASSRVFVQEGIYDKFEKKLLEKAK 240 (414)
Q Consensus 161 ~~g~~i~~~~a~~~~~~~~~e~gg~~~~iV~~dadl~~aa~~i~~~~~~~~Gq~C~a~~~i~V~~~i~d~f~~~l~~~~~ 240 (414)
.+|+.|.+.++ ++++|+++|+|||||+||++|||++.|++.+++++|.++||.|+++++||||++++|+|+++|+++++
T Consensus 207 ~~g~~i~~~aa-~~~~p~~lElgG~~~~iV~~daDl~~Aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~~~f~~~l~~~~~ 285 (454)
T cd07109 207 ETGIAVMRAAA-ENVVPVTLELGGKSPQIVFADADLEAALPVVVNAIIQNAGQTCSAGSRLLVHRSIYDEVLERLVERFR 285 (454)
T ss_pred HHHHHHHHHHh-hcCCcEEEECCCCCceEECCCCCHHHHHHHHHHHHHhccCCCCccCcEEEEcHHHHHHHHHHHHHHHH
Confidence 99999999987 88999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hcccCCCCCCCCcccccCCHHHHHHHHHHHHHHHHcCCEEEeCCcccC---CCCceeeeEEEeeCCCcccccccceecce
Q 015042 241 AWLVGDPFDPTVRQGPQISERHFDRILSYIEHGKREGATLLTGGKPIG---DKGYYIEPTIFTNVKEDMIIAKEEIFGPV 317 (414)
Q Consensus 241 ~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~---~~g~~~~Ptvl~~~~~~~~~~~~E~fgPv 317 (414)
++++|+|.+ .+++||++++.+++++.+++++++++|+++++||.... ..|+|++|||+.++++++.+++||+||||
T Consensus 286 ~~~~G~p~~-~~~~gpli~~~~~~~~~~~i~~a~~~ga~~l~gg~~~~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~fgPv 364 (454)
T cd07109 286 ALRVGPGLE-DPDLGPLISAKQLDRVEGFVARARARGARIVAGGRIAEGAPAGGYFVAPTLLDDVPPDSRLAQEEIFGPV 364 (454)
T ss_pred hCCCCCCcc-cCcCCCccCHHHHHHHHHHHHHHHhCCCEEEeCCCcCcccCCCCcEECcEEEecCCCCChhhhCCCCCce
Confidence 999999986 68999999999999999999999999999999987543 36899999999999999999999999999
Q ss_pred EEEEeeCCHHHHHHHhhcCCCCceEEEecCCHHHHHHHHHhcceeEEEEcCcC-CCCCCCCcccCCCCCCCccchHHHHH
Q 015042 318 MALMKFKTVEEAIKSANNTQYGLAAGIVTKDLNVANTVSRSIRAGIIWINCYF-GFSMDCPYGGYKMSGFGREYGLESLY 396 (414)
Q Consensus 318 l~v~~~~~~~eai~~~n~~~~gl~~sv~s~d~~~~~~~~~~l~~g~v~iN~~~-~~~~~~p~gG~~~sG~g~~~g~~~~~ 396 (414)
++|++|+|+||||+++|+++|||++||||+|.+.++++++++++|+|+||++. ...+.+||||+|.||+|+++|+++++
T Consensus 365 l~v~~~~~~deAi~~~n~~~~gL~~~i~t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~~pfgG~k~SG~G~~~g~~~~~ 444 (454)
T cd07109 365 LAVMPFDDEAEAIALANGTDYGLVAGVWTRDGDRALRVARRLRAGQVFVNNYGAGGGIELPFGGVKKSGHGREKGLEALY 444 (454)
T ss_pred EEEEecCCHHHHHHHhhCCCCCceEEEECCCHHHHHHHHHhcCcCeEEECCCCCCCCCCCCcCCcccCcCCccchHHHHH
Confidence 99999999999999999999999999999999999999999999999999987 45567899999999999999999999
Q ss_pred hhheeeEEE
Q 015042 397 KYLQIKSVV 405 (414)
Q Consensus 397 ~~~~~k~i~ 405 (414)
+|++.|+|.
T Consensus 445 ~f~~~k~i~ 453 (454)
T cd07109 445 NYTQTKTVA 453 (454)
T ss_pred HHhceeEEe
Confidence 999999985
|
Uncharacterized aldehyde dehydrogenase of Saccharopolyspora spinosa (AAS00426) and other similar sequences, are present in this CD. |
| >cd07116 ALDH_ACDHII-AcoD Ralstonia eutrophus NAD+-dependent acetaldehyde dehydrogenase II-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-86 Score=675.27 Aligned_cols=403 Identities=44% Similarity=0.711 Sum_probs=375.9
Q ss_pred CHHHHHHHHHhHHHHHHHHHHhcCCChHHHhhchHHHHHHHHHHHHHhhhhhcCcccccCCCcccceeecCCceEEEEcC
Q 015042 1 MWKFADLIEEHVEELAALDALDAGKVYLRAKTAEIPGAAEFLRFFAGAADKIHGEVLKMSSELQGYTLREPVGVVGHIIP 80 (414)
Q Consensus 1 L~~~a~~l~~~~~~l~~~~~~etGk~~~e~~~~ei~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p 80 (414)
|+++++.|++|+++|++++++|+|||..++...|+..+++.+++++....+..+...+...+...+.+++|+|||++|+|
T Consensus 66 L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~P 145 (479)
T cd07116 66 LNKIADRMEANLEMLAVAETWDNGKPVRETLAADIPLAIDHFRYFAGCIRAQEGSISEIDENTVAYHFHEPLGVVGQIIP 145 (479)
T ss_pred HHHHHHHHHHhHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHhHHHcCCeeecCCCCceEEEEEeccceEEEECC
Confidence 57899999999999999999999999987655699999999999998876654444333333456789999999999999
Q ss_pred CccchHHHHHhHHHHHhhCCeEEeecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhhHHHhhhCCCccEEEEeCCc
Q 015042 81 WNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLTALYYAHLAKLAGIPDGVLNVVPGFGPTAGAAICSHMDIDYVCFTGST 160 (414)
Q Consensus 81 ~n~P~~~~~~~~~~aLaaGN~vv~kps~~~~~~~~~l~~~l~~aG~p~g~v~~v~~~~~~~~~~l~~~~~v~~v~~tGs~ 160 (414)
||||+...++++++||++||+||+|||+.+|.++..+++++.++ +|+|++|++++.+.+.++.|+.||+||.|.||||+
T Consensus 146 wN~P~~~~~~~~~~ALaaGN~VV~KPs~~tp~~~~~l~~l~~~a-lP~gvv~~v~g~~~~~~~~L~~~~~v~~V~fTGS~ 224 (479)
T cd07116 146 WNFPLLMATWKLAPALAAGNCVVLKPAEQTPASILVLMELIGDL-LPPGVVNVVNGFGLEAGKPLASSKRIAKVAFTGET 224 (479)
T ss_pred CchHHHHHHHHHHHHHHcCCEEEEECCCCChHHHHHHHHHHHHH-CCcCcEEEEecCchhHHHHHhcCCCcCEEEEECCH
Confidence 99999999999999999999999999999999999999999998 99999999998777889999999999999999999
Q ss_pred HHHHHHHHHHHhcccceeEEEcCCCCCceEcCC------CCHHHHHHHHHHHhhccCCCCcccCceEEEeCchHHHHHHH
Q 015042 161 DVGRLVMQAAAASNLKQVSLELGGKSPLLIFDD------ADLDTAADVALLGNLYNKGEICVASSRVFVQEGIYDKFEKK 234 (414)
Q Consensus 161 ~~g~~i~~~~a~~~~~~~~~e~gg~~~~iV~~d------adl~~aa~~i~~~~~~~~Gq~C~a~~~i~V~~~i~d~f~~~ 234 (414)
.+|+.|.+.++ .+++|+++|+|||||+||++| ||++.|++.++++. +|+||.|++++|||||+++||+|+++
T Consensus 225 ~~G~~i~~~aa-~~~~p~~lElGGk~p~iV~~da~~~~~adl~~A~~~i~~~~-~~~GQ~C~a~~rv~V~~~i~d~f~~~ 302 (479)
T cd07116 225 TTGRLIMQYAS-ENIIPVTLELGGKSPNIFFADVMDADDAFFDKALEGFVMFA-LNQGEVCTCPSRALIQESIYDRFMER 302 (479)
T ss_pred HHHHHHHHHHH-cCCCeEEEECCCCCeEEEecCcccccccCHHHHHHHHHHHH-hcCCCCCCCCeEEEEcHHHHHHHHHH
Confidence 99999999998 789999999999999999987 79999999999864 69999999999999999999999999
Q ss_pred HHHHHhhcccCCCCCCCCcccccCCHHHHHHHHHHHHHHHHcCCEEEeCCcccC----CCCceeeeEEEeeCCCcccccc
Q 015042 235 LLEKAKAWLVGDPFDPTVRQGPQISERHFDRILSYIEHGKREGATLLTGGKPIG----DKGYYIEPTIFTNVKEDMIIAK 310 (414)
Q Consensus 235 l~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~----~~g~~~~Ptvl~~~~~~~~~~~ 310 (414)
|+++++++++|+|.++++.+||++++.+++++++++++++.+|+++++||.... ..|+|+.|||+.+++ +|.+++
T Consensus 303 l~~~~~~l~~G~p~~~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~~~~gg~~~~~~~~~~g~~~~Ptvl~~~~-~~~~~~ 381 (479)
T cd07116 303 ALERVKAIKQGNPLDTETMIGAQASLEQLEKILSYIDIGKEEGAEVLTGGERNELGGLLGGGYYVPTTFKGGN-KMRIFQ 381 (479)
T ss_pred HHHHHHhcCCCCCCCCCCcCCCCCCHHHHHHHHHHHHHHHHCCCEEEeCCCcCCCCCCCCCeeecCeEEccCC-CChhhh
Confidence 999999999999999999999999999999999999999999999999997642 258999999998874 999999
Q ss_pred cceecceEEEEeeCCHHHHHHHhhcCCCCceEEEecCCHHHHHHHHHhcceeEEEEcCcCCCCCCCCcccCCCCCCCccc
Q 015042 311 EEIFGPVMALMKFKTVEEAIKSANNTQYGLAAGIVTKDLNVANTVSRSIRAGIIWINCYFGFSMDCPYGGYKMSGFGREY 390 (414)
Q Consensus 311 ~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~sv~s~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~p~gG~~~sG~g~~~ 390 (414)
||+||||++|++|+|+||||+++|+++|||++||||+|.++++++++++++|.|+||++....+.+||||+|.||+|+++
T Consensus 382 eE~FGPVl~v~~~~~~~eai~~aN~~~~gLsa~v~t~d~~~a~~~~~~l~~G~v~iN~~~~~~~~~PfGG~k~SG~G~~~ 461 (479)
T cd07116 382 EEIFGPVLAVTTFKDEEEALEIANDTLYGLGAGVWTRDGNTAYRMGRGIQAGRVWTNCYHLYPAHAAFGGYKQSGIGREN 461 (479)
T ss_pred cCCcCceEEEEEeCCHHHHHHHHhCCcccceEEEEcCCHHHHHHHHHhcCcCeEEECCCCCCCCCCCcCCCccCcCCccC
Confidence 99999999999999999999999999999999999999999999999999999999988777778999999999999999
Q ss_pred hHHHHHhhheeeEEEee
Q 015042 391 GLESLYKYLQIKSVVTP 407 (414)
Q Consensus 391 g~~~~~~~~~~k~i~~~ 407 (414)
|++++++||++|+|+++
T Consensus 462 g~~~l~~~~~~k~~~~~ 478 (479)
T cd07116 462 HKMMLDHYQQTKNLLVS 478 (479)
T ss_pred hHHHHHHhhceEEEEEe
Confidence 99999999999999764
|
Included in this CD is the NAD+-dependent, acetaldehyde dehydrogenase II (AcDHII, AcoD, EC=1.2.1.3) from Ralstonia (Alcaligenes) eutrophus H16 involved in the catabolism of acetoin and ethanol, and similar proteins, such as, the dimeric dihydrolipoamide dehydrogenase of the acetoin dehydrogenase enzyme system of Klebsiella pneumonia. Also included are sequences similar to the NAD+-dependent chloroacetaldehyde dehydrogenases (AldA and AldB) of Xanthobacter autotrophicus GJ10 which are involved in the degradation of 1,2-dichloroethane. These proteins apparently require RpoN factors for expression. |
| >cd07130 ALDH_F7_AASADH NAD+-dependent alpha-aminoadipic semialdehyde dehydrogenase, ALDH family members 7A1 and 7B | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.2e-86 Score=673.40 Aligned_cols=404 Identities=32% Similarity=0.517 Sum_probs=373.5
Q ss_pred CHHHHHHHHHhHHHHHHHHHHhcCCChHHHhhchHHHHHHHHHHHHHhhhhhcCcccccC-CCcccceeecCCceEEEEc
Q 015042 1 MWKFADLIEEHVEELAALDALDAGKVYLRAKTAEIPGAAEFLRFFAGAADKIHGEVLKMS-SELQGYTLREPVGVVGHII 79 (414)
Q Consensus 1 L~~~a~~l~~~~~~l~~~~~~etGk~~~e~~~~ei~~~~~~l~~~a~~~~~~~~~~~~~~-~~~~~~~~~~P~Gvv~~i~ 79 (414)
|+++++.|++|+++|++++++|+|||..++. .|+..+++.+++++...+.+.+...+.. .+...+.+++|+|||++|+
T Consensus 62 L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~-~ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~I~ 140 (474)
T cd07130 62 VRQIGDALRKKKEALGKLVSLEMGKILPEGL-GEVQEMIDICDFAVGLSRQLYGLTIPSERPGHRMMEQWNPLGVVGVIT 140 (474)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHcCCCHHHHH-HHHHHHHHHHHHHHHhHHHhcCccccCCCCCceEEEEEecceeEEEEc
Confidence 5789999999999999999999999999764 6999999999999887665544433322 3445678899999999999
Q ss_pred CCccchHHHHHhHHHHHhhCCeEEeecCCCChHHHHHHHHH----HHHcCCCCCcEEEEeCCchhhHHHhhhCCCccEEE
Q 015042 80 PWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLTALYYAHL----AKLAGIPDGVLNVVPGFGPTAGAAICSHMDIDYVC 155 (414)
Q Consensus 80 p~n~P~~~~~~~~~~aLaaGN~vv~kps~~~~~~~~~l~~~----l~~aG~p~g~v~~v~~~~~~~~~~l~~~~~v~~v~ 155 (414)
|||||+...++++++||++||+||+|||+.+|.++..+.++ |.++|+|+|+++++++ +.+.++.|+.||+||+|.
T Consensus 141 p~N~P~~~~~~~~~~ALaaGN~VvlKps~~~p~~~~~l~~l~~~~~~~aglP~gv~~~v~g-~~~~~~~L~~~~~vd~V~ 219 (474)
T cd07130 141 AFNFPVAVWGWNAAIALVCGNVVVWKPSPTTPLTAIAVTKIVARVLEKNGLPGAIASLVCG-GADVGEALVKDPRVPLVS 219 (474)
T ss_pred cCCCHHHHHHHHhhHHHHcCCeEEeeCCccCHHHHHHHHHHHHHHHHhcCCCCCcEEEEeC-ChhHHHHHhcCCCCCEEE
Confidence 99999999999999999999999999999999999887765 5799999999999998 446789999999999999
Q ss_pred EeCCcHHHHHHHHHHHhcccceeEEEcCCCCCceEcCCCCHHHHHHHHHHHhhccCCCCcccCceEEEeCchHHHHHHHH
Q 015042 156 FTGSTDVGRLVMQAAAASNLKQVSLELGGKSPLLIFDDADLDTAADVALLGNLYNKGEICVASSRVFVQEGIYDKFEKKL 235 (414)
Q Consensus 156 ~tGs~~~g~~i~~~~a~~~~~~~~~e~gg~~~~iV~~dadl~~aa~~i~~~~~~~~Gq~C~a~~~i~V~~~i~d~f~~~l 235 (414)
||||+.+|+.|++.++ ++++|+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||++++|+|+++|
T Consensus 220 fTGs~~~g~~i~~~aa-~~~~~~~lElGGk~p~iV~~dadl~~Aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~d~f~~~l 298 (474)
T cd07130 220 FTGSTAVGRQVGQAVA-ARFGRSLLELGGNNAIIVMEDADLDLAVRAVLFAAVGTAGQRCTTTRRLIVHESIYDEVLERL 298 (474)
T ss_pred EECchHHHHHHHHHHH-hcCCCEEEEcCCCCeEEECCCCCHHHHHHHHHHHHHhcCCCCCcCCeEEEEcHhHHHHHHHHH
Confidence 9999999999999888 889999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhhcccCCCCCCCCcccccCCHHHHHHHHHHHHHHHHcCCEEEeCCcccCCCCceeeeEEEeeCCCcccccccceec
Q 015042 236 LEKAKAWLVGDPFDPTVRQGPQISERHFDRILSYIEHGKREGATLLTGGKPIGDKGYYIEPTIFTNVKEDMIIAKEEIFG 315 (414)
Q Consensus 236 ~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fg 315 (414)
+++++++++|+|.++++++||+++..+++++++++++++++|+++++||...+.+|+|++|||+.++++ |.+++||+||
T Consensus 299 ~~~~~~l~~g~p~~~~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~g~~~~PTvl~~~~~-~~i~~eE~FG 377 (474)
T cd07130 299 KKAYKQVRIGDPLDDGTLVGPLHTKAAVDNYLAAIEEAKSQGGTVLFGGKVIDGPGNYVEPTIVEGLSD-APIVKEETFA 377 (474)
T ss_pred HHHHhcCCcCCCCCCCCCCCCCcCHHHHHHHHHHHHHHHHCCCEEEECCCcCCCCCeEEccEEEecCCC-CHHHhCCCcC
Confidence 999999999999999999999999999999999999999999999999986545689999999987766 9999999999
Q ss_pred ceEEEEeeCCHHHHHHHhhcCCCCceEEEecCCHHHHHHHHHh--cceeEEEEcCcCC-CCCCCCcccCCCCCCCccchH
Q 015042 316 PVMALMKFKTVEEAIKSANNTQYGLAAGIVTKDLNVANTVSRS--IRAGIIWINCYFG-FSMDCPYGGYKMSGFGREYGL 392 (414)
Q Consensus 316 Pvl~v~~~~~~~eai~~~n~~~~gl~~sv~s~d~~~~~~~~~~--l~~g~v~iN~~~~-~~~~~p~gG~~~sG~g~~~g~ 392 (414)
||++|++|+|++||++++|+++|||++||||+|.+.+++++++ +++|+|+||..+. ..+.+||||+|.||+|+++|+
T Consensus 378 Pvl~v~~~~~~~eai~~aN~~~~gL~a~v~t~d~~~a~~~~~~~~~~~g~v~iN~~~~~~~~~~PfgG~k~SG~G~~~g~ 457 (474)
T cd07130 378 PILYVLKFDTLEEAIAWNNEVPQGLSSSIFTTDLRNAFRWLGPKGSDCGIVNVNIGTSGAEIGGAFGGEKETGGGRESGS 457 (474)
T ss_pred CeEEEEEeCCHHHHHHHHhCCCCCceEEEEcCCHHHHHHHHhhcCcceEEEEEcCCCCCCCCCCCcCccccccCCccchH
Confidence 9999999999999999999999999999999999999999987 8999999998654 456799999999999999999
Q ss_pred HHHHhhheeeEEEeeC
Q 015042 393 ESLYKYLQIKSVVTPI 408 (414)
Q Consensus 393 ~~~~~~~~~k~i~~~~ 408 (414)
+++++||++|+|++++
T Consensus 458 ~~~~~f~~~k~~~~~~ 473 (474)
T cd07130 458 DAWKQYMRRSTCTINY 473 (474)
T ss_pred HHHHHHhheEEEEEec
Confidence 9999999999988763
|
Alpha-aminoadipic semialdehyde dehydrogenase (AASADH, EC=1.2.1.31), also known as ALDH7A1, Antiquitin-1, ALDH7B, or delta-1-piperideine-6-carboxylate dehydrogenase (P6CDH), is a NAD+-dependent ALDH. Human ALDH7A1 is involved in the pipecolic acid pathway of lysine catabolism, catalyzing the oxidation of alpha-aminoadipic semialdehyde to alpha-aminoadipate. Arabidopsis thaliana ALDH7B4 appears to be an osmotic-stress-inducible ALDH gene encoding a turgor-responsive or stress-inducible ALDH. The Streptomyces clavuligerus P6CDH appears to be involved in cephamycin biosynthesis, catalyzing the second stage of the two-step conversion of lysine to alpha-aminoadipic acid. The ALDH7A1 enzyme and others in this group have been observed as tetramers, yet the bacterial P6CDH enzyme has been reported as a monomer. |
| >cd07124 ALDH_PutA-P5CDH-RocA Delta(1)-pyrroline-5-carboxylate dehydrogenase, RocA | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-86 Score=679.44 Aligned_cols=406 Identities=37% Similarity=0.636 Sum_probs=380.7
Q ss_pred CHHHHHHHHHhHHHHHHHHHHhcCCChHHHhhchHHHHHHHHHHHHHhhhhhcCcccccCCCcccceeecCCceEEEEcC
Q 015042 1 MWKFADLIEEHVEELAALDALDAGKVYLRAKTAEIPGAAEFLRFFAGAADKIHGEVLKMSSELQGYTLREPVGVVGHIIP 80 (414)
Q Consensus 1 L~~~a~~l~~~~~~l~~~~~~etGk~~~e~~~~ei~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p 80 (414)
|+++++.|++++++|++++++|+|||..++. .|+..+++.+++++..+++..+...+...+...+.+++|+|||++|+|
T Consensus 97 L~~~a~~l~~~~~~la~~~~~e~Gk~~~ea~-~ev~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p 175 (512)
T cd07124 97 LLRAAALLRRRRFELAAWMVLEVGKNWAEAD-ADVAEAIDFLEYYAREMLRLRGFPVEMVPGEDNRYVYRPLGVGAVISP 175 (512)
T ss_pred HHHHHHHHHHCHHHHHHHHHHHcCcCHHHHH-HHHHHHHHHHHHHHHHHHHhcCccccCCCCceeEEEEecceEEEEECC
Confidence 5789999999999999999999999999865 599999999999999887765544433345567899999999999999
Q ss_pred CccchHHHHHhHHHHHhhCCeEEeecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhhHHHhhhCCCccEEEEeCCc
Q 015042 81 WNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLTALYYAHLAKLAGIPDGVLNVVPGFGPTAGAAICSHMDIDYVCFTGST 160 (414)
Q Consensus 81 ~n~P~~~~~~~~~~aLaaGN~vv~kps~~~~~~~~~l~~~l~~aG~p~g~v~~v~~~~~~~~~~l~~~~~v~~v~~tGs~ 160 (414)
||||+...++++++||++||+||+|||+.+|+++..+.+++.++|+|+|+++++++++.+.++.|+.||++|.|.||||+
T Consensus 176 wN~P~~~~~~~i~~ALaaGN~VVlKPs~~tp~~~~~l~~~~~~aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~V~fTGs~ 255 (512)
T cd07124 176 WNFPLAILAGMTTAALVTGNTVVLKPAEDTPVIAAKLVEILEEAGLPPGVVNFLPGPGEEVGDYLVEHPDVRFIAFTGSR 255 (512)
T ss_pred CChHHHHHHHHHHHHHHcCCEEEEECCccccHHHHHHHHHHHHhCcCCCceEEeccCchHHHHHHhcCCCCCEEEEeCch
Confidence 99999999999999999999999999999999999999999999999999999999777889999999999999999999
Q ss_pred HHHHHHHHHHHhc-----ccceeEEEcCCCCCceEcCCCCHHHHHHHHHHHhhccCCCCcccCceEEEeCchHHHHHHHH
Q 015042 161 DVGRLVMQAAAAS-----NLKQVSLELGGKSPLLIFDDADLDTAADVALLGNLYNKGEICVASSRVFVQEGIYDKFEKKL 235 (414)
Q Consensus 161 ~~g~~i~~~~a~~-----~~~~~~~e~gg~~~~iV~~dadl~~aa~~i~~~~~~~~Gq~C~a~~~i~V~~~i~d~f~~~l 235 (414)
.+|+.|.+.++.. +++|+++|+|||||+||++|||++.|++.+++++|.|+||.|+++++||||++++|+|+++|
T Consensus 256 ~~g~~i~~~aa~~~~~~~~l~~~~lElgGk~p~iV~~daDl~~Aa~~i~~~~f~~~GQ~C~a~~rv~V~~~i~~~f~~~l 335 (512)
T cd07124 256 EVGLRIYERAAKVQPGQKWLKRVIAEMGGKNAIIVDEDADLDEAAEGIVRSAFGFQGQKCSACSRVIVHESVYDEFLERL 335 (512)
T ss_pred HHHHHHHHHHhcccccccCCCcEEEECCCCCeEEECCCCCHHHHHHHHHHHHHhhCCCccccceEEEEcHHHHHHHHHHH
Confidence 9999999988732 68999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhhcccCCCCCCCCcccccCCHHHHHHHHHHHHHHHHcCCEEEeCCcccCC--CCceeeeEEEeeCCCcccccccce
Q 015042 236 LEKAKAWLVGDPFDPTVRQGPQISERHFDRILSYIEHGKREGATLLTGGKPIGD--KGYYIEPTIFTNVKEDMIIAKEEI 313 (414)
Q Consensus 236 ~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~~--~g~~~~Ptvl~~~~~~~~~~~~E~ 313 (414)
+++++++++|+|.|+++++||++++.+++++.+++++++. |+++++||..... +|+|+.|||+.+++++|.+++||+
T Consensus 336 ~~~~~~~~~g~p~d~~~~~Gpli~~~~~~~v~~~i~~a~~-g~~vl~gG~~~~~~~~g~~~~Ptvl~~v~~~~~i~~eE~ 414 (512)
T cd07124 336 VERTKALKVGDPEDPEVYMGPVIDKGARDRIRRYIEIGKS-EGRLLLGGEVLELAAEGYFVQPTIFADVPPDHRLAQEEI 414 (512)
T ss_pred HHHHHhCCCCCCCCCCCcccCCcCHHHHHHHHHHHHHHHh-CCEEEecCccCCCCCCCceEcCEEEecCCCCChHHhCCC
Confidence 9999999999999999999999999999999999999998 8999999976542 689999999999999999999999
Q ss_pred ecceEEEEeeCCHHHHHHHhhcCCCCceEEEecCCHHHHHHHHHhcceeEEEEcCcCC--CCCCCCcccCCCCCCC-ccc
Q 015042 314 FGPVMALMKFKTVEEAIKSANNTQYGLAAGIVTKDLNVANTVSRSIRAGIIWINCYFG--FSMDCPYGGYKMSGFG-REY 390 (414)
Q Consensus 314 fgPvl~v~~~~~~~eai~~~n~~~~gl~~sv~s~d~~~~~~~~~~l~~g~v~iN~~~~--~~~~~p~gG~~~sG~g-~~~ 390 (414)
||||++|++|+|++||++++|+++|||++||||+|.+.++++++++++|+|+||+... ..+.+||||+|.||+| +++
T Consensus 415 FgPvl~v~~~~~~~eai~~~n~~~~gL~~~v~t~d~~~~~~~~~~l~~G~v~vN~~~~~~~~~~~PfGG~k~SG~G~~~~ 494 (512)
T cd07124 415 FGPVLAVIKAKDFDEALEIANDTEYGLTGGVFSRSPEHLERARREFEVGNLYANRKITGALVGRQPFGGFKMSGTGSKAG 494 (512)
T ss_pred cCCeEEEEecCCHHHHHHHHhCCCCCCeEEEEcCCHHHHHHHHHhCCcceEEECCCCCCCCCCCCCCCccccccCCCccC
Confidence 9999999999999999999999999999999999999999999999999999998764 3357999999999999 788
Q ss_pred hHHHHHhhheeeEEEeeC
Q 015042 391 GLESLYKYLQIKSVVTPI 408 (414)
Q Consensus 391 g~~~~~~~~~~k~i~~~~ 408 (414)
|++|+++||++|+|.+++
T Consensus 495 g~~~~~~~t~~k~v~~~~ 512 (512)
T cd07124 495 GPDYLLQFMQPKTVTENF 512 (512)
T ss_pred cHHHHHHhccEEEEEEeC
Confidence 999999999999998764
|
Delta(1)-pyrroline-5-carboxylate dehydrogenase (EC=1.5.1.12 ), RocA: a proline catabolic enzyme of the aldehyde dehydrogenase (ALDH) protein superfamily. The proline catabolic enzymes, proline dehydrogenase and Delta(1)-pyrroline-5-carboxylate dehydrogenase (P5CDH), catalyze the two-step oxidation of proline to glutamate; P5CDH catalyzes the oxidation of glutamate semialdehyde, utilizing NAD+ as the electron acceptor. In some bacteria, the two enzymes are fused into the bifunctional flavoenzyme, proline utilization A (PutA). In this CD, monofunctional enzyme sequences such as seen in the Bacillus subtilis RocA P5CDH are also present. These enzymes play important roles in cellular redox control, superoxide generation, and apoptosis. |
| >TIGR01804 BADH glycine betaine aldehyde dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-86 Score=674.23 Aligned_cols=401 Identities=47% Similarity=0.819 Sum_probs=377.9
Q ss_pred CHHHHHHHHHhHHHHHHHHHHhcCCChHHHhhchHHHHHHHHHHHHHhhhhhcCcccccCCCcccceeecCCceEEEEcC
Q 015042 1 MWKFADLIEEHVEELAALDALDAGKVYLRAKTAEIPGAAEFLRFFAGAADKIHGEVLKMSSELQGYTLREPVGVVGHIIP 80 (414)
Q Consensus 1 L~~~a~~l~~~~~~l~~~~~~etGk~~~e~~~~ei~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p 80 (414)
|+++++.|++++++|++++++|+|||..++...|+..+++.+++++..+++..+...+.......+.+++|+|||++|+|
T Consensus 63 L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~I~p 142 (467)
T TIGR01804 63 LRRIAELIRERNEELAKLETLDTGKTLEETSVADMDDIADVFEFFAGLADKDGGEIIPLPIPSFSYTIREPLGVCVGIGA 142 (467)
T ss_pred HHHHHHHHHHhHHHHHHHHHHHcCCCHHHHhHHHHHHHHHHHHHHHHHHHHhCCccccCCCCceEEEEEeeeeEEEEECC
Confidence 57899999999999999999999999998656799999999999999887765543332222446789999999999999
Q ss_pred CccchHHHHHhHHHHHhhCCeEEeecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhhHHHhhhCCCccEEEEeCCc
Q 015042 81 WNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLTALYYAHLAKLAGIPDGVLNVVPGFGPTAGAAICSHMDIDYVCFTGST 160 (414)
Q Consensus 81 ~n~P~~~~~~~~~~aLaaGN~vv~kps~~~~~~~~~l~~~l~~aG~p~g~v~~v~~~~~~~~~~l~~~~~v~~v~~tGs~ 160 (414)
||||+...++++++||++||+||+|||+.+|.++..+.++|.++|+|+|+++++++++.+.++.|+.|+++|.|.||||+
T Consensus 143 ~N~P~~~~~~~~~~ALaaGN~VvlKps~~tp~~~~~l~~~~~~aglP~gv~~~v~g~~~~~~~~L~~~~~v~~V~fTGs~ 222 (467)
T TIGR01804 143 WNYPLQIASWKIAPALAAGNAMVFKPSEITPLTALKVAELMEEAGLPDGVFNVVLGKGAEVGEPLVNHKDVAKVSFTGGV 222 (467)
T ss_pred CchHHHHHHHHHHHHHhcCCEEEeeCCccCcHHHHHHHHHHHHcCcCcCcEEEEeCCcHHHHHHHhcCCCCCEEEEECcH
Confidence 99999999999999999999999999999999999999999999999999999998767889999999999999999999
Q ss_pred HHHHHHHHHHHhcccceeEEEcCCCCCceEcCCCCHHHHHHHHHHHhhccCCCCcccCceEEEeCchHHHHHHHHHHHHh
Q 015042 161 DVGRLVMQAAAASNLKQVSLELGGKSPLLIFDDADLDTAADVALLGNLYNKGEICVASSRVFVQEGIYDKFEKKLLEKAK 240 (414)
Q Consensus 161 ~~g~~i~~~~a~~~~~~~~~e~gg~~~~iV~~dadl~~aa~~i~~~~~~~~Gq~C~a~~~i~V~~~i~d~f~~~l~~~~~ 240 (414)
.+|+.|.+.++ .+++|+++|+|||||+||++|||++.|++.+++++|.|+||.|+++++||||+++||+|+++|++.++
T Consensus 223 ~~g~~v~~~a~-~~l~~~~lElGG~~~~iV~~dADl~~Aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~ 301 (467)
T TIGR01804 223 PTGKKIMAAAA-DHLKHVTMELGGKSPLIVFDDADLELAVDQAMNGNFFSAGQVCSNGTRVFVHNKIKEKFEARLVERTK 301 (467)
T ss_pred HHHHHHHHHHH-hcCCcEEEecCCCCeeEECCCCCHHHHHHHHHHHHHHhcCCCCCCCCEEEEcHHHHHHHHHHHHHHHH
Confidence 99999999988 88999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hcccCCCCCCCCcccccCCHHHHHHHHHHHHHHHHcCCEEEeCCcccC----CCCceeeeEEEeeCCCcccccccceecc
Q 015042 241 AWLVGDPFDPTVRQGPQISERHFDRILSYIEHGKREGATLLTGGKPIG----DKGYYIEPTIFTNVKEDMIIAKEEIFGP 316 (414)
Q Consensus 241 ~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~----~~g~~~~Ptvl~~~~~~~~~~~~E~fgP 316 (414)
++++|+|.++++++||++++.+++++++++++++.+|+++++||.... ..|+|+.|||+.++++++++++||+|||
T Consensus 302 ~~~~g~p~~~~~~~gpli~~~~~~~~~~~i~~a~~~Ga~vl~gg~~~~~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~FgP 381 (467)
T TIGR01804 302 RIKLGDGFDEATEMGPLISAEHRDKVESYIEKGKEEGATLACGGKRPEREGLQNGFFIEPTVFTDCTDDMTIVREEIFGP 381 (467)
T ss_pred hCCCCCCCCCCCccCccCCHHHHHHHHHHHHHHHHCCCEEEeCCCccccccCCCCeEEeeEEEeCCCCCChHHhCCCCCc
Confidence 999999999999999999999999999999999999999999997542 2589999999999999999999999999
Q ss_pred eEEEEeeCCHHHHHHHhhcCCCCceEEEecCCHHHHHHHHHhcceeEEEEcCcCCCCCCCCcccCCCCCCCccchHHHHH
Q 015042 317 VMALMKFKTVEEAIKSANNTQYGLAAGIVTKDLNVANTVSRSIRAGIIWINCYFGFSMDCPYGGYKMSGFGREYGLESLY 396 (414)
Q Consensus 317 vl~v~~~~~~~eai~~~n~~~~gl~~sv~s~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~p~gG~~~sG~g~~~g~~~~~ 396 (414)
|++|++|+|+||||+++|+++|||++||||+|.++++++++++++|+|+||++....+.+||||+|+||+|+++|.+|++
T Consensus 382 vl~v~~~~~~deai~~~n~~~~gLsa~i~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~pfGG~k~SG~G~~~g~~~~~ 461 (467)
T TIGR01804 382 VMTVLTFSSEDEVIARANDTIYGLAAGVFTADLGRAHRVANQLKAGTVWINDFHPYPAEAPWGGYKQSGIGRENGKAGLA 461 (467)
T ss_pred eEEEEecCCHHHHHHHHhCCCCCceEEEECCCHHHHHHHHHhCCcceEEECCCCCCCCCCCcCCcccCccCCCChHHHHH
Confidence 99999999999999999999999999999999999999999999999999998777778999999999999999999999
Q ss_pred hhheee
Q 015042 397 KYLQIK 402 (414)
Q Consensus 397 ~~~~~k 402 (414)
+||++|
T Consensus 462 ~~~~~~ 467 (467)
T TIGR01804 462 EYTEVK 467 (467)
T ss_pred HHhccC
Confidence 999975
|
Betaine aldehyde dehydrogenase is a member of the aldehyde dehydrogenase family (pfam00171). |
| >cd07106 ALDH_AldA-AAD23400 Streptomyces aureofaciens putative aldehyde dehydrogenase AldA (AAD23400)-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.9e-86 Score=669.31 Aligned_cols=399 Identities=41% Similarity=0.700 Sum_probs=375.7
Q ss_pred CHHHHHHHHHhHHHHHHHHHHhcCCChHHHhhchHHHHHHHHHHHHHhhhhhcCcccccCCCcccceeecCCceEEEEcC
Q 015042 1 MWKFADLIEEHVEELAALDALDAGKVYLRAKTAEIPGAAEFLRFFAGAADKIHGEVLKMSSELQGYTLREPVGVVGHIIP 80 (414)
Q Consensus 1 L~~~a~~l~~~~~~l~~~~~~etGk~~~e~~~~ei~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p 80 (414)
|+++++.|++|+++|++++++|+|||..++. .|+..+++.+++++.... .+.......+...+.+++|+|||++|+|
T Consensus 47 L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a~-~ev~~~~~~l~~~~~~~~--~~~~~~~~~~~~~~~~~~P~GVv~~I~p 123 (446)
T cd07106 47 LLAIADAIEANAEELARLLTLEQGKPLAEAQ-FEVGGAVAWLRYTASLDL--PDEVIEDDDTRRVELRRKPLGVVAAIVP 123 (446)
T ss_pred HHHHHHHHHHhHHHHHHHHHHHcCCCHHHHH-HHHHHHHHHHHHHHhhhh--cCccccCCCCceEEEEEEcceEEEEEcC
Confidence 5789999999999999999999999998754 599999999999987653 2222222234567899999999999999
Q ss_pred CccchHHHHHhHHHHHhhCCeEEeecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhhHHHhhhCCCccEEEEeCCc
Q 015042 81 WNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLTALYYAHLAKLAGIPDGVLNVVPGFGPTAGAAICSHMDIDYVCFTGST 160 (414)
Q Consensus 81 ~n~P~~~~~~~~~~aLaaGN~vv~kps~~~~~~~~~l~~~l~~aG~p~g~v~~v~~~~~~~~~~l~~~~~v~~v~~tGs~ 160 (414)
||||+...++++++||++||+||+|||+.+|.++..+.+++.++ +|+|+++++++ +.+.++.|+.|+++|.|.||||+
T Consensus 124 ~N~P~~~~~~~~~~ALaaGN~VilKps~~~p~~~~~l~~~~~~~-lP~g~~~~v~g-~~~~~~~l~~~~~vd~V~fTGs~ 201 (446)
T cd07106 124 WNFPLLLAAWKIAPALLAGNTVVLKPSPFTPLCTLKLGELAQEV-LPPGVLNVVSG-GDELGPALTSHPDIRKISFTGST 201 (446)
T ss_pred CChHHHHHHHHHHHHHHcCCEEEEECCccchHHHHHHHHHHHHh-CCcCeEEEeeC-ChhHHHHHhcCCCCCEEEEECCH
Confidence 99999999999999999999999999999999999999999996 99999999998 55688999999999999999999
Q ss_pred HHHHHHHHHHHhcccceeEEEcCCCCCceEcCCCCHHHHHHHHHHHhhccCCCCcccCceEEEeCchHHHHHHHHHHHHh
Q 015042 161 DVGRLVMQAAAASNLKQVSLELGGKSPLLIFDDADLDTAADVALLGNLYNKGEICVASSRVFVQEGIYDKFEKKLLEKAK 240 (414)
Q Consensus 161 ~~g~~i~~~~a~~~~~~~~~e~gg~~~~iV~~dadl~~aa~~i~~~~~~~~Gq~C~a~~~i~V~~~i~d~f~~~l~~~~~ 240 (414)
.+|+.|.+.++ ++++|+++|+|||||+||++|||++.|++.+++++|.|+||.|+++++||||++++|+|+++|+++++
T Consensus 202 ~~g~~v~~~aa-~~~~~~~lElGG~~p~iV~~dADl~~aa~~iv~~~~~~~GQ~C~a~~rv~V~~~v~d~f~~~l~~~~~ 280 (446)
T cd07106 202 ATGKKVMASAA-KTLKRVTLELGGNDAAIVLPDVDIDAVAPKLFWGAFINSGQVCAAIKRLYVHESIYDEFCEALVALAK 280 (446)
T ss_pred HHHHHHHHHHH-hcCCeeEEecCCCCeeEECCCCCHHHHHHHHHHHHHHhcCCCCCCCcEEEEccccHHHHHHHHHHHHH
Confidence 99999999988 88999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hcccCCCCCCCCcccccCCHHHHHHHHHHHHHHHHcCCEEEeCCcccCCCCceeeeEEEeeCCCcccccccceecceEEE
Q 015042 241 AWLVGDPFDPTVRQGPQISERHFDRILSYIEHGKREGATLLTGGKPIGDKGYYIEPTIFTNVKEDMIIAKEEIFGPVMAL 320 (414)
Q Consensus 241 ~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v 320 (414)
++++|+|.++++++||++++.++++++++++++..+|+++++||......|+|+.|||+.+++++|.+++||+||||++|
T Consensus 281 ~~~~G~p~~~~~~~gpli~~~~~~~i~~~i~~a~~~ga~~~~gg~~~~~~g~~~~Ptvl~~v~~~~~i~~~E~FgPvl~v 360 (446)
T cd07106 281 AAVVGDGLDPGTTLGPVQNKMQYDKVKELVEDAKAKGAKVLAGGEPLDGPGYFIPPTIVDDPPEGSRIVDEEQFGPVLPV 360 (446)
T ss_pred hcCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCEEEeCCCcCCCCCeeEcCEEEeCCCCCCHHHhcCccCCeEEE
Confidence 99999999999999999999999999999999999999999999875456899999999999999999999999999999
Q ss_pred EeeCCHHHHHHHhhcCCCCceEEEecCCHHHHHHHHHhcceeEEEEcCcCCCCCCCCcccCCCCCCCccchHHHHHhhhe
Q 015042 321 MKFKTVEEAIKSANNTQYGLAAGIVTKDLNVANTVSRSIRAGIIWINCYFGFSMDCPYGGYKMSGFGREYGLESLYKYLQ 400 (414)
Q Consensus 321 ~~~~~~~eai~~~n~~~~gl~~sv~s~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~p~gG~~~sG~g~~~g~~~~~~~~~ 400 (414)
++|+|++|||+++|+++|||++||||+|.+.++++++++++|.|+||++....+.+||||+|.||+|+++|++|+++||+
T Consensus 361 ~~~~~~~eai~~~n~~~~gL~~~i~t~d~~~~~~~~~~~~~G~v~iN~~~~~~~~~pfGG~~~SG~G~~~g~~~~~~~t~ 440 (446)
T cd07106 361 LKYSDEDEVIARANDSEYGLGASVWSSDLERAEAVARRLEAGTVWINTHGALDPDAPFGGHKQSGIGVEFGIEGLKEYTQ 440 (446)
T ss_pred EeeCCHHHHHHHHhCCCCCceEEEECCCHHHHHHHHHhCCccEEEECCCCCCCCCCCCCCccccccCccchHHHHHHhhc
Confidence 99999999999999999999999999999999999999999999999988888889999999999999999999999999
Q ss_pred eeEEE
Q 015042 401 IKSVV 405 (414)
Q Consensus 401 ~k~i~ 405 (414)
.|+|.
T Consensus 441 ~k~v~ 445 (446)
T cd07106 441 TQVIN 445 (446)
T ss_pred eeEEe
Confidence 99985
|
Putative aldehyde dehydrogenase, AldA, from Streptomyces aureofaciens (locus AAD23400) and other similar sequences are present in this CD. |
| >cd07148 ALDH_RL0313 Uncharacterized ALDH ( RL0313) with similarity to Tortula ruralis aldehyde dehydrogenase ALDH21A1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.8e-86 Score=669.93 Aligned_cols=399 Identities=33% Similarity=0.547 Sum_probs=373.6
Q ss_pred CHHHHHHHHHhHHHHHHHHHHhcCCChHHHhhchHHHHHHHHHHHHHhhhhhcCcccccC-----CCcccceeecCCceE
Q 015042 1 MWKFADLIEEHVEELAALDALDAGKVYLRAKTAEIPGAAEFLRFFAGAADKIHGEVLKMS-----SELQGYTLREPVGVV 75 (414)
Q Consensus 1 L~~~a~~l~~~~~~l~~~~~~etGk~~~e~~~~ei~~~~~~l~~~a~~~~~~~~~~~~~~-----~~~~~~~~~~P~Gvv 75 (414)
|+++++.|++++++|++++++|+|||..++ ..|+..+++.+++++..+.+..+...+.. .+...+.+++|+|||
T Consensus 50 L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a-~~ev~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv 128 (455)
T cd07148 50 LERLADLMEERADELALLIAREGGKPLVDA-KVEVTRAIDGVELAADELGQLGGREIPMGLTPASAGRIAFTTREPIGVV 128 (455)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHcCCCHHHH-HHHHHHHHHHHHHHHHHHHHhcCcccccccccCCCCceEEEEEecceEE
Confidence 578999999999999999999999999976 46999999999999988876655433211 234567899999999
Q ss_pred EEEcCCccchHHHHHhHHHHHhhCCeEEeecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhhHHHhhhCCCccEEE
Q 015042 76 GHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLTALYYAHLAKLAGIPDGVLNVVPGFGPTAGAAICSHMDIDYVC 155 (414)
Q Consensus 76 ~~i~p~n~P~~~~~~~~~~aLaaGN~vv~kps~~~~~~~~~l~~~l~~aG~p~g~v~~v~~~~~~~~~~l~~~~~v~~v~ 155 (414)
++|+|||||+...++++++||++||+||+|||+.+|.++..+.++|.++|+|+|++++++++ .+.++.|+.||++|+|.
T Consensus 129 ~~I~p~N~P~~~~~~~~~~ALaaGN~VvlKps~~~p~~~~~l~~~~~~aGlP~gvv~~v~g~-~~~~~~L~~~~~v~~v~ 207 (455)
T cd07148 129 VAISAFNHPLNLIVHQVAPAIAAGCPVIVKPALATPLSCLAFVDLLHEAGLPEGWCQAVPCE-NAVAEKLVTDPRVAFFS 207 (455)
T ss_pred EEECCCCcHHHHHHHHHHHHHHcCCEEEeeCCCcccHHHHHHHHHHHHcCCCcCcEEEEeCC-hHHHHHHhcCCCCCEEE
Confidence 99999999999999999999999999999999999999999999999999999999999984 46789999999999999
Q ss_pred EeCCcHHHHHHHHHHHhcccceeEEEcCCCCCceEcCCCCHHHHHHHHHHHhhccCCCCcccCceEEEeCchHHHHHHHH
Q 015042 156 FTGSTDVGRLVMQAAAASNLKQVSLELGGKSPLLIFDDADLDTAADVALLGNLYNKGEICVASSRVFVQEGIYDKFEKKL 235 (414)
Q Consensus 156 ~tGs~~~g~~i~~~~a~~~~~~~~~e~gg~~~~iV~~dadl~~aa~~i~~~~~~~~Gq~C~a~~~i~V~~~i~d~f~~~l 235 (414)
||||+++|+.|.+.++ . .+|+++|+|||||+||++|||++.|++.+++++|.++||.|+++++||||++++|+|+++|
T Consensus 208 fTGs~~~G~~i~~~aa-~-~~~~~lElGG~~p~iV~~dADl~~aa~~i~~~~f~~~GQ~C~a~~rv~V~~~i~d~f~~~l 285 (455)
T cd07148 208 FIGSARVGWMLRSKLA-P-GTRCALEHGGAAPVIVDRSADLDAMIPPLVKGGFYHAGQVCVSVQRVFVPAEIADDFAQRL 285 (455)
T ss_pred EECCHHHHHHHHHHhh-c-CCcEEEecCCCCceEECCCCCHHHHHHHHHHHHHhcCCCCccCCeEEEEcHhHHHHHHHHH
Confidence 9999999999999876 4 5899999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhhcccCCCCCCCCcccccCCHHHHHHHHHHHHHHHHcCCEEEeCCcccCCCCceeeeEEEeeCCCcccccccceec
Q 015042 236 LEKAKAWLVGDPFDPTVRQGPQISERHFDRILSYIEHGKREGATLLTGGKPIGDKGYYIEPTIFTNVKEDMIIAKEEIFG 315 (414)
Q Consensus 236 ~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fg 315 (414)
+++++++++|+|.++++++||+++..+++++++++++++++|+++++||... .++|++|||+.+++++|.+++||+||
T Consensus 286 ~~~~~~~~~g~p~~~~~~~gpli~~~~~~~~~~~i~~a~~~Ga~vl~gg~~~--~~~~~~Ptvl~~~~~~~~~~~eE~Fg 363 (455)
T cd07148 286 AAAAEKLVVGDPTDPDTEVGPLIRPREVDRVEEWVNEAVAAGARLLCGGKRL--SDTTYAPTVLLDPPRDAKVSTQEIFG 363 (455)
T ss_pred HHHHhcCCCCCCCCCCCcCCCCcCHHHHHHHHHHHHHHHhCCCEEEeCCccC--CCCeEcCEEEeCCCCCCHHHhCCCcC
Confidence 9999999999999999999999999999999999999999999999999764 47899999999999999999999999
Q ss_pred ceEEEEeeCCHHHHHHHhhcCCCCceEEEecCCHHHHHHHHHhcceeEEEEcCcCCCC-CCCCcccCCCCCCCccchHHH
Q 015042 316 PVMALMKFKTVEEAIKSANNTQYGLAAGIVTKDLNVANTVSRSIRAGIIWINCYFGFS-MDCPYGGYKMSGFGREYGLES 394 (414)
Q Consensus 316 Pvl~v~~~~~~~eai~~~n~~~~gl~~sv~s~d~~~~~~~~~~l~~g~v~iN~~~~~~-~~~p~gG~~~sG~g~~~g~~~ 394 (414)
||++|++|+|++|||+++|+++|||++||||+|.+.++++++++++|+|+||++.... +.+||||+|.||+|+++|+++
T Consensus 364 Pvl~v~~~~~~deai~~~n~~~~gL~a~i~t~d~~~~~~~~~~~~~g~v~iN~~~~~~~~~~PfgG~k~SG~G~~~g~~~ 443 (455)
T cd07148 364 PVVCVYSYDDLDEAIAQANSLPVAFQAAVFTKDLDVALKAVRRLDATAVMVNDHTAFRVDWMPFAGRRQSGYGTGGIPYT 443 (455)
T ss_pred CeEEEEecCCHHHHHHHHhCCCCCceEEEEcCCHHHHHHHHHHcCcCeEEECCCCCCCCCCCCCCcchhcccCCCchHHH
Confidence 9999999999999999999999999999999999999999999999999999886543 468999999999999999999
Q ss_pred HHhhheeeEEE
Q 015042 395 LYKYLQIKSVV 405 (414)
Q Consensus 395 ~~~~~~~k~i~ 405 (414)
+++||+.|++.
T Consensus 444 ~~~~~~~k~~~ 454 (455)
T cd07148 444 MHDMTQEKMAV 454 (455)
T ss_pred HHHhhceeEEe
Confidence 99999999985
|
Uncharacterized aldehyde dehydrogenase (locus RL0313) with sequence similarity to the moss Tortula ruralis aldehyde dehydrogenase ALDH21A1 (RNP123) believed to play an important role in the detoxification of aldehydes generated in response to desiccation- and salinity-stress, and similar sequences are included in this CD. |
| >TIGR03250 PhnAcAld_DH putative phosphonoacetaldehyde dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.1e-86 Score=671.53 Aligned_cols=400 Identities=34% Similarity=0.583 Sum_probs=373.5
Q ss_pred CHHHHHHHHHhHHHHHHHHHHhcCCChHHHhhchHHHHHHHHHHHHHhhhhhcCccccc-----CCCcccceeecCC-ce
Q 015042 1 MWKFADLIEEHVEELAALDALDAGKVYLRAKTAEIPGAAEFLRFFAGAADKIHGEVLKM-----SSELQGYTLREPV-GV 74 (414)
Q Consensus 1 L~~~a~~l~~~~~~l~~~~~~etGk~~~e~~~~ei~~~~~~l~~~a~~~~~~~~~~~~~-----~~~~~~~~~~~P~-Gv 74 (414)
|+++++.|++++++|++++++|+|||..+. ..|+..+++.+++++..+.+..+..... ..+...+.+++|+ ||
T Consensus 64 l~~~a~~l~~~~~ela~~~~~e~Gk~~~~a-~~ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~Gv 142 (472)
T TIGR03250 64 LDRAAALLAARKEEISDLITLESGLSKKDS-LYEVGRVADVLTFAAAEALRDDGQIFSCDLTPHGKARKVFTQREPLLGV 142 (472)
T ss_pred HHHHHHHHHHhHHHHHHHHHHHhCCCHHHH-HHHHHHHHHHHHHHHHHHHHhcCcccccccCCCCCCceEEEEEcCCCCE
Confidence 578999999999999999999999999975 4699999999999998876655443221 1233467899997 99
Q ss_pred EEEEcCCccchHHHHHhHHHHHhhCCeEEeecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhhHHHhhhCCCccEE
Q 015042 75 VGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLTALYYAHLAKLAGIPDGVLNVVPGFGPTAGAAICSHMDIDYV 154 (414)
Q Consensus 75 v~~i~p~n~P~~~~~~~~~~aLaaGN~vv~kps~~~~~~~~~l~~~l~~aG~p~g~v~~v~~~~~~~~~~l~~~~~v~~v 154 (414)
|++|+|||||++..++++++||++||+||+|||+.+|.++..+.++|.++|+|+|++|++++.+.+.++.|+.||++|.|
T Consensus 143 v~~I~P~N~P~~~~~~~~~~ALaaGN~VvlKps~~~p~~~~~l~~~~~~aGlP~gvv~~v~g~~~~~~~~l~~~~~v~~v 222 (472)
T TIGR03250 143 ISAITPFNHPMNQVAHKIAPAIATNNRMVVKPSEKTPLSALYLADILYEAGLPPQMLQVVTGDPREIADELITNPHVDLV 222 (472)
T ss_pred EEEEcCCcHHHHHHHHHHHHHHHcCCEEEEECCCcchHHHHHHHHHHHHcCCCcccEEEEecCchHHHHHHhcCCCCCEE
Confidence 99999999999999999999999999999999999999999999999999999999999999777789999999999999
Q ss_pred EEeCCcHHHHHHHHHHHhcccceeEEEcCCCCCceEcCCCCHHHHHHHHHHHhhccCCCCcccCceEEEeCchHHHHHHH
Q 015042 155 CFTGSTDVGRLVMQAAAASNLKQVSLELGGKSPLLIFDDADLDTAADVALLGNLYNKGEICVASSRVFVQEGIYDKFEKK 234 (414)
Q Consensus 155 ~~tGs~~~g~~i~~~~a~~~~~~~~~e~gg~~~~iV~~dadl~~aa~~i~~~~~~~~Gq~C~a~~~i~V~~~i~d~f~~~ 234 (414)
.||||..+|+.|.+.++ ++|+++|+|||||+||++|||++.|++.+++++|.|+||.|+++++||||++++|+|+++
T Consensus 223 ~fTGs~~~g~~i~~~a~---~~~~~lElGGk~p~iV~~dAdl~~aa~~i~~~~f~~~GQ~C~a~~rv~V~~~i~d~f~~~ 299 (472)
T TIGR03250 223 TFTGGVAIGKYIAARAG---YRRQVLELGGNDPLIVMEDADLDRAADLAVKGSYKNSGQRCTAVKRMLVQESVADRFTEL 299 (472)
T ss_pred EEECcHHHHHHHHHHhc---CCceEEecCCCCeEEECCCCCHHHHHHHHHHHHHHhhCCCCCCCcEEEEeHhHHHHHHHH
Confidence 99999999999998764 689999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhhcccCCCCCCCCcccccCCHHHHHHHHHHHHHHHHcCCEEEeCCcccCCCCceeeeEEEeeCCCccccccccee
Q 015042 235 LLEKAKAWLVGDPFDPTVRQGPQISERHFDRILSYIEHGKREGATLLTGGKPIGDKGYYIEPTIFTNVKEDMIIAKEEIF 314 (414)
Q Consensus 235 l~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~f 314 (414)
|++.++++++|+|.++++++||+++..+++++++++++++++|+++++||.. .|+|++|||+.+++++|.+++||+|
T Consensus 300 l~~~~~~~~~G~p~~~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~vl~gg~~---~g~~~~PTvl~~v~~~~~i~~eE~F 376 (472)
T TIGR03250 300 LVEKTRAWRYGDPMDPSVDMGTVIDEAAAILFEARVNEAIAQGARLLLGNVR---DGALYAPTVLDRVDPSMTLVREETF 376 (472)
T ss_pred HHHHHHhcCCCCCCCCCCcCCCCCCHHHHHHHHHHHHHHHHCCCEEEECCCc---CCEEEcCEEEeCCCCCChHHhCCCc
Confidence 9999999999999999999999999999999999999999999999999865 5899999999999999999999999
Q ss_pred cceEEEEeeCCHHHHHHHhhcCCCCceEEEecCCHHHHHHHHHhcceeEEEEcCcCCCC-CCCCcccCCCCCCC-ccchH
Q 015042 315 GPVMALMKFKTVEEAIKSANNTQYGLAAGIVTKDLNVANTVSRSIRAGIIWINCYFGFS-MDCPYGGYKMSGFG-REYGL 392 (414)
Q Consensus 315 gPvl~v~~~~~~~eai~~~n~~~~gl~~sv~s~d~~~~~~~~~~l~~g~v~iN~~~~~~-~~~p~gG~~~sG~g-~~~g~ 392 (414)
|||++|++|+|.+||++++|+++|||++||||+|.+.++++++++++|+|+||+..... +.+||||+|+||+| +.+|.
T Consensus 377 GPvl~v~~~~~~~eai~~aN~~~~gL~a~v~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~~PfGG~k~SG~G~~~g~~ 456 (472)
T TIGR03250 377 GPVSPVIRFCDIDDAIRISNSTAYGLSSGVCTNRLDYITRFIAELQVGTVNVWEVPGYRLELTPFGGIKDSGLGYKEGVQ 456 (472)
T ss_pred CCeEEEEEeCCHHHHHHHHhCCCccceEEEEcCCHHHHHHHHHHCCcceEEEcCCCCCCCCCCCCCccccccCCCCCChH
Confidence 99999999999999999999999999999999999999999999999999999876543 55899999999999 57779
Q ss_pred HHHHhhheeeEEEee
Q 015042 393 ESLYKYLQIKSVVTP 407 (414)
Q Consensus 393 ~~~~~~~~~k~i~~~ 407 (414)
+|+++||+.|+|+++
T Consensus 457 ~~l~~ft~~k~i~~~ 471 (472)
T TIGR03250 457 EAMKSFTNLKTYSLP 471 (472)
T ss_pred HHHHHhhceEEEEEe
Confidence 999999999999765
|
It seems reasonably certain then, that this enzyme catalyzes the NAD-dependent oxidation of phosphonoacetaldehyde to phosphonoacetate, bridging the metabolic gap between PhnW and PhnA. We propose the name phosphonoacetaldehyde dehydrogenase and the gene symbol PhnY for this enzyme. |
| >PRK09847 gamma-glutamyl-gamma-aminobutyraldehyde dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.5e-86 Score=672.87 Aligned_cols=406 Identities=44% Similarity=0.759 Sum_probs=381.3
Q ss_pred CHHHHHHHHHhHHHHHHHHHHhcCCChHHHhhchHHHHHHHHHHHHHhhhhhcCcccccCCCcccceeecCCceEEEEcC
Q 015042 1 MWKFADLIEEHVEELAALDALDAGKVYLRAKTAEIPGAAEFLRFFAGAADKIHGEVLKMSSELQGYTLREPVGVVGHIIP 80 (414)
Q Consensus 1 L~~~a~~l~~~~~~l~~~~~~etGk~~~e~~~~ei~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p 80 (414)
|+++++.|++|+++|++++++|+|||..++...|+..+++.+++++...++..+...+...+...+.+++|+|||++|+|
T Consensus 87 L~~~a~~l~~~~~ela~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~a~~~~~~~g~~~~~~~~~~~~~~~~P~GVv~~I~P 166 (494)
T PRK09847 87 LNKLADLMEAHAEELALLETLDTGKPIRHSLRDDIPGAARAIRWYAEAIDKVYGEVATTSSHELAMIVREPVGVIAAIVP 166 (494)
T ss_pred HHHHHHHHHHhHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCccccCCCCceeEEEecceeEEEEECC
Confidence 57899999999999999999999999987655699999999999999887776654433334456789999999999999
Q ss_pred CccchHHHHHhHHHHHhhCCeEEeecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhhHHHhhhCCCccEEEEeCCc
Q 015042 81 WNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLTALYYAHLAKLAGIPDGVLNVVPGFGPTAGAAICSHMDIDYVCFTGST 160 (414)
Q Consensus 81 ~n~P~~~~~~~~~~aLaaGN~vv~kps~~~~~~~~~l~~~l~~aG~p~g~v~~v~~~~~~~~~~l~~~~~v~~v~~tGs~ 160 (414)
||||+...++++++||++||+||+|||+.+|.++..+.+++.++|+|+|++|++++++.+.++.|+.|+++|.|.||||+
T Consensus 167 wN~P~~~~~~~~~~ALaaGN~VvlKps~~~p~~~~~l~~~~~~aGlP~g~v~~v~g~~~~~~~~L~~~~~vd~v~fTGs~ 246 (494)
T PRK09847 167 WNFPLLLTCWKLGPALAAGNSVILKPSEKSPLSAIRLAGLAKEAGLPDGVLNVVTGFGHEAGQALSRHNDIDAIAFTGST 246 (494)
T ss_pred CccHHHHHHHHHHHHHHcCCEEEEeCCCCChHHHHHHHHHHHHcCcCcCcEEEEeCCChhHHHHHhcCCCCCEEEEECCH
Confidence 99999999999999999999999999999999999999999999999999999999777889999999999999999999
Q ss_pred HHHHHHHHHHHhcccceeEEEcCCCCCceEcCCC-CHHHHHHHHHHHhhccCCCCcccCceEEEeCchHHHHHHHHHHHH
Q 015042 161 DVGRLVMQAAAASNLKQVSLELGGKSPLLIFDDA-DLDTAADVALLGNLYNKGEICVASSRVFVQEGIYDKFEKKLLEKA 239 (414)
Q Consensus 161 ~~g~~i~~~~a~~~~~~~~~e~gg~~~~iV~~da-dl~~aa~~i~~~~~~~~Gq~C~a~~~i~V~~~i~d~f~~~l~~~~ 239 (414)
.+|+.|.+.++..+++|+++|+||+||+||.+|+ |++.|++.+++++|.|+||.|+++++||||++++|+|+++|++++
T Consensus 247 ~~g~~v~~~aa~~~~~~~~lElGGk~~~iV~~daaDl~~Aa~~i~~~~~~~aGQ~C~a~~rv~V~~~i~d~f~~~l~~~~ 326 (494)
T PRK09847 247 RTGKQLLKDAGDSNMKRVWLEAGGKSANIVFADCPDLQQAASATAAGIFYNQGQVCIAGTRLLLEESIADEFLALLKQQA 326 (494)
T ss_pred HHHHHHHHHhhhhCCCeEEEecCCCCeeEEcCCccCHHHHHHHHHHHHHhcCCCCCCCCcEEEEcHHHHHHHHHHHHHHH
Confidence 9999999987634789999999999999999997 999999999999999999999999999999999999999999999
Q ss_pred hhcccCCCCCCCCcccccCCHHHHHHHHHHHHHHHHcCCEEEeCCcccCCCCceeeeEEEeeCCCcccccccceecceEE
Q 015042 240 KAWLVGDPFDPTVRQGPQISERHFDRILSYIEHGKREGATLLTGGKPIGDKGYYIEPTIFTNVKEDMIIAKEEIFGPVMA 319 (414)
Q Consensus 240 ~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~ 319 (414)
+++++|+|.++++.+||+++..+++++.+++++++++| ++++||... ..+.|++|||+.++++++++++||+||||++
T Consensus 327 ~~~~~g~p~~~~~~~gpli~~~~~~~v~~~v~~a~~~G-~i~~gg~~~-~~~~~~~Ptvl~~v~~~~~~~~eE~FgPvl~ 404 (494)
T PRK09847 327 QNWQPGHPLDPATTMGTLIDCAHADSVHSFIREGESKG-QLLLDGRNA-GLAAAIGPTIFVDVDPNASLSREEIFGPVLV 404 (494)
T ss_pred HhcCCCCCCCCCCcCCCCcCHHHHHHHHHHHHHHHHCC-eEEECCccC-CCCceEeeEEEeCCCCCChHHhCcCcCceEE
Confidence 99999999999999999999999999999999999999 999998764 3578999999999999999999999999999
Q ss_pred EEeeCCHHHHHHHhhcCCCCceEEEecCCHHHHHHHHHhcceeEEEEcCcCCCCCCCCcccCCCCCCCccchHHHHHhhh
Q 015042 320 LMKFKTVEEAIKSANNTQYGLAAGIVTKDLNVANTVSRSIRAGIIWINCYFGFSMDCPYGGYKMSGFGREYGLESLYKYL 399 (414)
Q Consensus 320 v~~~~~~~eai~~~n~~~~gl~~sv~s~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~p~gG~~~sG~g~~~g~~~~~~~~ 399 (414)
|++|+|++|||+++|+++|||++||||+|.+.+.++++++++|+|+||++....+.+||||+|.||+|+++|.+|+++||
T Consensus 405 v~~~~~~~eai~~~n~~~~gLsa~v~t~d~~~a~~~~~~l~~G~v~iN~~~~~~~~~PfGG~k~SG~G~~~g~~~l~~ft 484 (494)
T PRK09847 405 VTRFTSEEQALQLANDSQYGLGAAVWTRDLSRAHRMSRRLKAGSVFVNNYNDGDMTVPFGGYKQSGNGRDKSLHALEKFT 484 (494)
T ss_pred EEecCCHHHHHHHHhCCCCCceEEEEcCCHHHHHHHHHhCCcceEEECCCCCCCCCCCcCCCcccccCccchHHHHHHhh
Confidence 99999999999999999999999999999999999999999999999998777778999999999999999999999999
Q ss_pred eeeEEEeeC
Q 015042 400 QIKSVVTPI 408 (414)
Q Consensus 400 ~~k~i~~~~ 408 (414)
+.|+|.++.
T Consensus 485 ~~k~v~~~~ 493 (494)
T PRK09847 485 ELKTIWISL 493 (494)
T ss_pred ceEEEEEec
Confidence 999997653
|
|
| >cd07152 ALDH_BenzADH NAD-dependent benzaldehyde dehydrogenase II-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.2e-86 Score=666.95 Aligned_cols=399 Identities=39% Similarity=0.621 Sum_probs=375.2
Q ss_pred CHHHHHHHHHhHHHHHHHHHHhcCCChHHHhhchHHHHHHHHHHHHHhhhhhcCcccccCCCcccceeecCCceEEEEcC
Q 015042 1 MWKFADLIEEHVEELAALDALDAGKVYLRAKTAEIPGAAEFLRFFAGAADKIHGEVLKMSSELQGYTLREPVGVVGHIIP 80 (414)
Q Consensus 1 L~~~a~~l~~~~~~l~~~~~~etGk~~~e~~~~ei~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p 80 (414)
|+++++.|++|+++|++++++|+||+..+. ..|+..+++.+++++...++..+...+...+...+.+++|+|||++|+|
T Consensus 41 L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a-~~ev~~~i~~l~~~~~~~~~~~~~~~~~~~g~~~~~~~~P~Gvv~~i~p 119 (443)
T cd07152 41 LRRAADLLEEHADEIADWIVRESGSIRPKA-GFEVGAAIGELHEAAGLPTQPQGEILPSAPGRLSLARRVPLGVVGVISP 119 (443)
T ss_pred HHHHHHHHHHhHHHHHHHHHHhcCCCHHHH-HHHHHHHHHHHHHHHHhHHHhCCccccccCCceeEEEEecceEEEEECC
Confidence 578999999999999999999999999875 4599999999999998776554444433345567889999999999999
Q ss_pred CccchHHHHHhHHHHHhhCCeEEeecCCCChHHH-HHHHHHHHHcCCCCCcEEEEeCCchhhHHHhhhCCCccEEEEeCC
Q 015042 81 WNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLTA-LYYAHLAKLAGIPDGVLNVVPGFGPTAGAAICSHMDIDYVCFTGS 159 (414)
Q Consensus 81 ~n~P~~~~~~~~~~aLaaGN~vv~kps~~~~~~~-~~l~~~l~~aG~p~g~v~~v~~~~~~~~~~l~~~~~v~~v~~tGs 159 (414)
||||++..++++++||++||+||+|||+.+|.++ ..+.++|.++|+|+|+++++++ +.+.++.|+.||++|.|.||||
T Consensus 120 ~N~P~~~~~~~~~~ALaaGN~VvlKps~~~p~~~~~~l~~~~~~ag~P~gvv~~v~g-~~~~~~~l~~~~~v~~V~fTGs 198 (443)
T cd07152 120 FNFPLILAMRSVAPALALGNAVVLKPDPRTPVSGGVVIARLFEEAGLPAGVLHVLPG-GADAGEALVEDPNVAMISFTGS 198 (443)
T ss_pred CCcHHHHHHHHHHHHHHcCCEEEEECCcccchhHHHHHHHHHHHhCcCcCcEEEecC-ChHHHHHHhcCCCCCEEEEECC
Confidence 9999999999999999999999999999999996 7889999999999999999998 5678899999999999999999
Q ss_pred cHHHHHHHHHHHhcccceeEEEcCCCCCceEcCCCCHHHHHHHHHHHhhccCCCCcccCceEEEeCchHHHHHHHHHHHH
Q 015042 160 TDVGRLVMQAAAASNLKQVSLELGGKSPLLIFDDADLDTAADVALLGNLYNKGEICVASSRVFVQEGIYDKFEKKLLEKA 239 (414)
Q Consensus 160 ~~~g~~i~~~~a~~~~~~~~~e~gg~~~~iV~~dadl~~aa~~i~~~~~~~~Gq~C~a~~~i~V~~~i~d~f~~~l~~~~ 239 (414)
+.+|+.|.+.++ ++++|+++|+|||||+||++|||++.|++.+++++|.|+||.|+++++||||+++||+|+++|++++
T Consensus 199 ~~~g~~i~~~aa-~~~~~~~lElGGk~~~iV~~dAdl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~~~f~~~l~~~~ 277 (443)
T cd07152 199 TAVGRKVGEAAG-RHLKKVSLELGGKNALIVLDDADLDLAASNGAWGAFLHQGQICMAAGRHLVHESVADAYTAKLAAKA 277 (443)
T ss_pred HHHHHHHHHHHH-hcCCcEEEECCCCCeEEECCCCCHHHHHHHHHHHHHhhcCCCCcCCeeEEEcHHHHHHHHHHHHHHH
Confidence 999999999988 8899999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhcccCCCCCCCCcccccCCHHHHHHHHHHHHHHHHcCCEEEeCCcccCCCCceeeeEEEeeCCCcccccccceecceEE
Q 015042 240 KAWLVGDPFDPTVRQGPQISERHFDRILSYIEHGKREGATLLTGGKPIGDKGYYIEPTIFTNVKEDMIIAKEEIFGPVMA 319 (414)
Q Consensus 240 ~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~ 319 (414)
+++++|+|.++++.+||++++.+++++.+++++++.+|+++++||.. +|+|++|||+.+++++|++++||+||||++
T Consensus 278 ~~~~~g~p~~~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~vl~gg~~---~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~ 354 (443)
T cd07152 278 KHLPVGDPATGQVALGPLINARQLDRVHAIVDDSVAAGARLEAGGTY---DGLFYRPTVLSGVKPGMPAFDEEIFGPVAP 354 (443)
T ss_pred HhCCCCCCCCCCCCcCCCcCHHHHHHHHHHHHHHHhCCCEEEeccCc---CCEEEcCEEEecCCCCChhhhccccCCeEE
Confidence 99999999999999999999999999999999999999999999975 589999999999999999999999999999
Q ss_pred EEeeCCHHHHHHHhhcCCCCceEEEecCCHHHHHHHHHhcceeEEEEcCcCCCC-CCCCcccCCCCCCC-ccchHHHHHh
Q 015042 320 LMKFKTVEEAIKSANNTQYGLAAGIVTKDLNVANTVSRSIRAGIIWINCYFGFS-MDCPYGGYKMSGFG-REYGLESLYK 397 (414)
Q Consensus 320 v~~~~~~~eai~~~n~~~~gl~~sv~s~d~~~~~~~~~~l~~g~v~iN~~~~~~-~~~p~gG~~~sG~g-~~~g~~~~~~ 397 (414)
|++|+|.+||++++|+++|||++||||+|.+.++++++++++|+|+||++.... +.+||||+|.||+| +++|++|+++
T Consensus 355 v~~~~~~~eai~~~n~~~~gL~a~v~t~d~~~a~~~~~~l~~G~v~iN~~~~~~~~~~pfGG~~~SG~G~~~~g~~~l~~ 434 (443)
T cd07152 355 VTVFDSDEEAVALANDTEYGLSAGIISRDVGRAMALADRLRTGMLHINDQTVNDEPHNPFGGMGASGNGSRFGGPANWEE 434 (443)
T ss_pred EEeeCCHHHHHHHHhCCCccceEEEECCCHHHHHHHHHhCCcCeEEECCCCCCCCCCCCCCCcccccCCCccCcHHHHHH
Confidence 999999999999999999999999999999999999999999999999877644 67999999999999 8889999999
Q ss_pred hheeeEEE
Q 015042 398 YLQIKSVV 405 (414)
Q Consensus 398 ~~~~k~i~ 405 (414)
||++|+++
T Consensus 435 ~~~~k~~~ 442 (443)
T cd07152 435 FTQWQWVT 442 (443)
T ss_pred hhceeEEe
Confidence 99999975
|
NAD-dependent, benzaldehyde dehydrogenase II (XylC, BenzADH, EC=1.2.1.28) is involved in the oxidation of benzyl alcohol to benzoate. In Acinetobacter calcoaceticus, this process is carried out by the chromosomally encoded, benzyl alcohol dehydrogenase (xylB) and benzaldehyde dehydrogenase II (xylC) enzymes; whereas in Pseudomonas putida they are encoded by TOL plasmids. |
| >cd07088 ALDH_LactADH-AldA Escherichia coli lactaldehyde dehydrogenase AldA-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.3e-86 Score=671.05 Aligned_cols=403 Identities=42% Similarity=0.712 Sum_probs=380.8
Q ss_pred CHHHHHHHHHhHHHHHHHHHHhcCCChHHHhhchHHHHHHHHHHHHHhhhhhcCcccccC-CCcccceeecCCceEEEEc
Q 015042 1 MWKFADLIEEHVEELAALDALDAGKVYLRAKTAEIPGAAEFLRFFAGAADKIHGEVLKMS-SELQGYTLREPVGVVGHII 79 (414)
Q Consensus 1 L~~~a~~l~~~~~~l~~~~~~etGk~~~e~~~~ei~~~~~~l~~~a~~~~~~~~~~~~~~-~~~~~~~~~~P~Gvv~~i~ 79 (414)
|+++++.|++++++|++++++|+|||..++ ..|+..+++.+++++.++.+..+...+.. .+...+.+++|+|||++|+
T Consensus 63 L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a-~~ev~~~~~~l~~~~~~a~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~I~ 141 (468)
T cd07088 63 LRKLADLIRENADELAKLIVEEQGKTLSLA-RVEVEFTADYIDYMAEWARRIEGEIIPSDRPNENIFIFKVPIGVVAGIL 141 (468)
T ss_pred HHHHHHHHHHhHHHHHHHHHHhcCCCHHHH-HHHHHHHHHHHHHHHHHHHHhCCccccCccccceeEEEEecceeEEEEc
Confidence 578999999999999999999999999975 46999999999999988877655544432 3556788999999999999
Q ss_pred CCccchHHHHHhHHHHHhhCCeEEeecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhhHHHhhhCCCccEEEEeCC
Q 015042 80 PWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLTALYYAHLAKLAGIPDGVLNVVPGFGPTAGAAICSHMDIDYVCFTGS 159 (414)
Q Consensus 80 p~n~P~~~~~~~~~~aLaaGN~vv~kps~~~~~~~~~l~~~l~~aG~p~g~v~~v~~~~~~~~~~l~~~~~v~~v~~tGs 159 (414)
|||||+...++++++||++||+||+|||+.+|.++..+.++|.++|+|+|+++++++++.+.++.|+.|+++|.|.||||
T Consensus 142 p~N~P~~~~~~~~~~AL~aGN~VVlKps~~~p~~~~~l~~~~~~aglP~gvv~~v~g~~~~~~~~l~~~~~v~~V~ftGs 221 (468)
T cd07088 142 PWNFPFFLIARKLAPALVTGNTIVIKPSEETPLNALEFAELVDEAGLPAGVLNIVTGRGSVVGDALVAHPKVGMISLTGS 221 (468)
T ss_pred cCchHHHHHHHHHHHHHHcCCEEEEECCCcchHHHHHHHHHHHHcCcCccceEEEecCchHHHHHHhcCCCCCEEEEECc
Confidence 99999999999999999999999999999999999999999999999999999999977678899999999999999999
Q ss_pred cHHHHHHHHHHHhcccceeEEEcCCCCCceEcCCCCHHHHHHHHHHHhhccCCCCcccCceEEEeCchHHHHHHHHHHHH
Q 015042 160 TDVGRLVMQAAAASNLKQVSLELGGKSPLLIFDDADLDTAADVALLGNLYNKGEICVASSRVFVQEGIYDKFEKKLLEKA 239 (414)
Q Consensus 160 ~~~g~~i~~~~a~~~~~~~~~e~gg~~~~iV~~dadl~~aa~~i~~~~~~~~Gq~C~a~~~i~V~~~i~d~f~~~l~~~~ 239 (414)
+.+|+.|.+.++ ++++|+++|+|||||+||++|||++.|++.+++++|.|+||.|+++++||||++++|+|+++|++++
T Consensus 222 ~~~g~~i~~~aa-~~~~~~~lelGG~~~~iV~~dadl~~aa~~iv~~~~~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~ 300 (468)
T cd07088 222 TEAGQKIMEAAA-ENITKVSLELGGKAPAIVMKDADLDLAVKAIVDSRIINCGQVCTCAERVYVHEDIYDEFMEKLVEKM 300 (468)
T ss_pred HHHHHHHHHHHH-hcCCcEEEECCCCCeEEECCCCCHHHHHHHHHHHHhcccCcCCcCCeEEEEcHHHHHHHHHHHHHHH
Confidence 999999999988 8999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhcccCCCCCCCCcccccCCHHHHHHHHHHHHHHHHcCCEEEeCCcccC-CCCceeeeEEEeeCCCcccccccceecceE
Q 015042 240 KAWLVGDPFDPTVRQGPQISERHFDRILSYIEHGKREGATLLTGGKPIG-DKGYYIEPTIFTNVKEDMIIAKEEIFGPVM 318 (414)
Q Consensus 240 ~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~-~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl 318 (414)
+++++|+|.++++.+||++++.+++++++++++++++|+++++||.... ..|+|++|||+.+++++|.+++||+||||+
T Consensus 301 ~~~~~g~p~~~~~~~gpli~~~~~~~~~~~i~~a~~~ga~vl~gg~~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl 380 (468)
T cd07088 301 KAVKVGDPFDAATDMGPLVNEAALDKVEEMVERAVEAGATLLTGGKRPEGEKGYFYEPTVLTNVRQDMEIVQEEIFGPVL 380 (468)
T ss_pred HhcCCCCCCCCCCccCcccCHHHHHHHHHHHHHHHHCCCEEEeCCCCCCCCCceeEcCEEEecCCCCCchhhCCCcCCeE
Confidence 9999999999999999999999999999999999999999999997653 368999999999999999999999999999
Q ss_pred EEEeeCCHHHHHHHhhcCCCCceEEEecCCHHHHHHHHHhcceeEEEEcCcCCCCCCCCcccCCCCCCCccchHHHHHhh
Q 015042 319 ALMKFKTVEEAIKSANNTQYGLAAGIVTKDLNVANTVSRSIRAGIIWINCYFGFSMDCPYGGYKMSGFGREYGLESLYKY 398 (414)
Q Consensus 319 ~v~~~~~~~eai~~~n~~~~gl~~sv~s~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~p~gG~~~sG~g~~~g~~~~~~~ 398 (414)
+|++|+|++||++++|+++|||++||||+|.+.++++++++++|+|+||++.......||||+|.||+|+++|++|+++|
T Consensus 381 ~v~~~~~~~eai~~~n~~~~gL~~~v~t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~p~gG~k~SG~G~~~g~~~l~~~ 460 (468)
T cd07088 381 PVVKFSSLDEAIELANDSEYGLTSYIYTENLNTAMRATNELEFGETYINRENFEAMQGFHAGWKKSGLGGADGKHGLEEY 460 (468)
T ss_pred EEEecCCHHHHHHHHhCCCCCceEEEECCCHHHHHHHHHhCCcceEEECCCCCCCCCCCcCCcccccCCcCchHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999876666679999999999999999999999
Q ss_pred heeeEEE
Q 015042 399 LQIKSVV 405 (414)
Q Consensus 399 ~~~k~i~ 405 (414)
|+.|+|+
T Consensus 461 t~~k~v~ 467 (468)
T cd07088 461 LQTKVVY 467 (468)
T ss_pred hceeEEe
Confidence 9999985
|
Lactaldehyde dehydrogenase from Escherichia coli (AldA, LactADH, EC=1.2.1.22), an NAD(+)-dependent enzyme involved in the metabolism of L-fucose and L-rhamnose, and other similar sequences are present in this CD. |
| >cd07114 ALDH_DhaS Uncharacterized Candidatus pelagibacter aldehyde dehydrogenase, DhaS-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.3e-86 Score=668.82 Aligned_cols=403 Identities=47% Similarity=0.825 Sum_probs=380.6
Q ss_pred CHHHHHHHHHhHHHHHHHHHHhcCCChHHHhhchHHHHHHHHHHHHHhhhhhcCcccccC-CCcccceeecCCceEEEEc
Q 015042 1 MWKFADLIEEHVEELAALDALDAGKVYLRAKTAEIPGAAEFLRFFAGAADKIHGEVLKMS-SELQGYTLREPVGVVGHII 79 (414)
Q Consensus 1 L~~~a~~l~~~~~~l~~~~~~etGk~~~e~~~~ei~~~~~~l~~~a~~~~~~~~~~~~~~-~~~~~~~~~~P~Gvv~~i~ 79 (414)
|++++++|.+++++|++++++|+|||..+. ..|+..+++.+++++.+.+++.+...+.. .+...+.+++|+|||++|+
T Consensus 49 L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~~-~~ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~I~ 127 (457)
T cd07114 49 LRRLADLIEANAEELAELETRDNGKLIRET-RAQVRYLAEWYRYYAGLADKIEGAVIPVDKGDYLNFTRREPLGVVAAIT 127 (457)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcCCCHHHH-HHHHHHHHHHHHHHHHHHHHhcCcccccCCCCceEEEEEecceEEEEEC
Confidence 578999999999999999999999999975 46999999999999987776644433322 3455788999999999999
Q ss_pred CCccchHHHHHhHHHHHhhCCeEEeecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhhHHHhhhCCCccEEEEeCC
Q 015042 80 PWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLTALYYAHLAKLAGIPDGVLNVVPGFGPTAGAAICSHMDIDYVCFTGS 159 (414)
Q Consensus 80 p~n~P~~~~~~~~~~aLaaGN~vv~kps~~~~~~~~~l~~~l~~aG~p~g~v~~v~~~~~~~~~~l~~~~~v~~v~~tGs 159 (414)
|||||+...++++++||++||+||+|||+.+|.++..++++|.++|+|+++|+++++++.+.++.|+.|++++.|.||||
T Consensus 128 p~N~P~~~~~~~~~~AL~aGN~Vilkps~~~p~~~~~l~~~l~~aglP~~vv~~v~g~~~~~~~~l~~~~~i~~V~ftGs 207 (457)
T cd07114 128 PWNSPLLLLAKKLAPALAAGNTVVLKPSEHTPASTLELAKLAEEAGFPPGVVNVVTGFGPETGEALVEHPLVAKIAFTGG 207 (457)
T ss_pred CCccHHHHHHHHHHHHHhcCCeEEeECCccchHHHHHHHHHHHHcCcCCCcEEEEeCCCchHHHHHhcCCCCCEEEEECC
Confidence 99999999999999999999999999999999999999999999999999999999977778899999999999999999
Q ss_pred cHHHHHHHHHHHhcccceeEEEcCCCCCceEcCCCCHHHHHHHHHHHhhccCCCCcccCceEEEeCchHHHHHHHHHHHH
Q 015042 160 TDVGRLVMQAAAASNLKQVSLELGGKSPLLIFDDADLDTAADVALLGNLYNKGEICVASSRVFVQEGIYDKFEKKLLEKA 239 (414)
Q Consensus 160 ~~~g~~i~~~~a~~~~~~~~~e~gg~~~~iV~~dadl~~aa~~i~~~~~~~~Gq~C~a~~~i~V~~~i~d~f~~~l~~~~ 239 (414)
..+|+.+++.++ ++++|+++|+||+||+||++|||++.|++.|++++|.++||.|+++++||||++++|+|+++|++++
T Consensus 208 ~~~g~~v~~~aa-~~~~~~~lelgG~~~~iV~~dAdl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~v~~~f~~~l~~~~ 286 (457)
T cd07114 208 TETGRHIARAAA-ENLAPVTLELGGKSPNIVFDDADLDAAVNGVVAGIFAAAGQTCVAGSRLLVQRSIYDEFVERLVARA 286 (457)
T ss_pred HHHHHHHHHHHH-hcCCeEEEecCCCCeeEECCCCCHHHHHHHHHHHHHhccCCCCCCCceEEEcHHHHHHHHHHHHHHH
Confidence 999999999988 8899999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhcccCCCCCCCCcccccCCHHHHHHHHHHHHHHHHcCCEEEeCCcccC----CCCceeeeEEEeeCCCcccccccceec
Q 015042 240 KAWLVGDPFDPTVRQGPQISERHFDRILSYIEHGKREGATLLTGGKPIG----DKGYYIEPTIFTNVKEDMIIAKEEIFG 315 (414)
Q Consensus 240 ~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~----~~g~~~~Ptvl~~~~~~~~~~~~E~fg 315 (414)
+++++|+|.++++++||++++.+++++++++++++++|+++++||.... ..|+|++|||+.++++++.++++|+||
T Consensus 287 ~~~~~g~p~~~~~~~gpli~~~~~~~~~~~i~~a~~~ga~~l~gg~~~~~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fg 366 (457)
T cd07114 287 RAIRVGDPLDPETQMGPLATERQLEKVERYVARAREEGARVLTGGERPSGADLGAGYFFEPTILADVTNDMRIAQEEVFG 366 (457)
T ss_pred HhCCCCCCCCCCCCCCCCcCHHHHHHHHHHHHHHHHCCCEEEeCCCccccccCCCCCEECCEEEeCCCCCChhhhcCCcC
Confidence 9999999999999999999999999999999999999999999997643 358999999999999999999999999
Q ss_pred ceEEEEeeCCHHHHHHHhhcCCCCceEEEecCCHHHHHHHHHhcceeEEEEcCcCCCCCCCCcccCCCCCCCccchHHHH
Q 015042 316 PVMALMKFKTVEEAIKSANNTQYGLAAGIVTKDLNVANTVSRSIRAGIIWINCYFGFSMDCPYGGYKMSGFGREYGLESL 395 (414)
Q Consensus 316 Pvl~v~~~~~~~eai~~~n~~~~gl~~sv~s~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~p~gG~~~sG~g~~~g~~~~ 395 (414)
||++|++|+|.|||++++|+++|||++||||+|.+.++++++++++|+|+||+.....+.+||||+|.||+|+++|.+|+
T Consensus 367 Pvl~v~~~~~~deai~~~n~~~~gL~~~ift~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~pfgG~k~SG~G~~~g~~~~ 446 (457)
T cd07114 367 PVLSVIPFDDEEEAIALANDSEYGLAAGIWTRDLARAHRVARAIEAGTVWVNTYRALSPSSPFGGFKDSGIGRENGIEAI 446 (457)
T ss_pred ceEEEeccCCHHHHHHHhhCCCcCceeEEECCCHHHHHHHHHhcCcceEEECCCCCCCCCCCCCCCccCcCCccchHHHH
Confidence 99999999999999999999999999999999999999999999999999999877778899999999999999999999
Q ss_pred HhhheeeEEE
Q 015042 396 YKYLQIKSVV 405 (414)
Q Consensus 396 ~~~~~~k~i~ 405 (414)
++||++|+|+
T Consensus 447 ~~f~~~k~~~ 456 (457)
T cd07114 447 REYTQTKSVW 456 (457)
T ss_pred HHHhceeEEe
Confidence 9999999985
|
Uncharacterized aldehyde dehydrogenase from Candidatus pelagibacter (DhaS) and other related sequences are present in this CD. |
| >TIGR01237 D1pyr5carbox2 delta-1-pyrroline-5-carboxylate dehydrogenase, group 2, putative | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.3e-86 Score=674.94 Aligned_cols=406 Identities=32% Similarity=0.561 Sum_probs=378.3
Q ss_pred CHHHHHHHHHhHHHHHHHHHHhcCCChHHHhhchHHHHHHHHHHHHHhhhhhcCccccc-CCCcccceeecCCceEEEEc
Q 015042 1 MWKFADLIEEHVEELAALDALDAGKVYLRAKTAEIPGAAEFLRFFAGAADKIHGEVLKM-SSELQGYTLREPVGVVGHII 79 (414)
Q Consensus 1 L~~~a~~l~~~~~~l~~~~~~etGk~~~e~~~~ei~~~~~~l~~~a~~~~~~~~~~~~~-~~~~~~~~~~~P~Gvv~~i~ 79 (414)
|+++++.|++++++|++++++|+|||..++ ..|+..+++.+++++..+++..+...+. ..+...+++++|+|||++|+
T Consensus 97 L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a-~~ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVV~~I~ 175 (511)
T TIGR01237 97 LRKAAAIMERRRHELNALICLEVGKIIPEA-DAEVAEAIDFCEYYAREMERLAGQGVNLDIEGETNRYFYQPRGVAVVIS 175 (511)
T ss_pred HHHHHHHHHHCHHHHHHHHHHHcCCCHHHH-HHHHHHHHHHHHHHHHHHHHhcCccccCCCCCceeEEEEecceeEEEEC
Confidence 578999999999999999999999999975 4599999999999999887765543322 23456788999999999999
Q ss_pred CCccchHHHHHhHHHHHhhCCeEEeecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhhHHHhhhCCCccEEEEeCC
Q 015042 80 PWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLTALYYAHLAKLAGIPDGVLNVVPGFGPTAGAAICSHMDIDYVCFTGS 159 (414)
Q Consensus 80 p~n~P~~~~~~~~~~aLaaGN~vv~kps~~~~~~~~~l~~~l~~aG~p~g~v~~v~~~~~~~~~~l~~~~~v~~v~~tGs 159 (414)
|||||+..+++++++||++||+||+|||+.+|+++..+.+++.++|+|+|++|++++++.+.++.|+.||+++.|.||||
T Consensus 176 P~N~P~~~~~~~i~~ALaaGN~VVlKPs~~tp~~~~~l~~~~~~aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~V~fTGs 255 (511)
T TIGR01237 176 PWNFPMAIAVGMTVAPIVTGNCVVLKPAETSTVIAAKIVEILIEAGLPPGVFQFVPGKGSEVGSYLVNHPKTHLITFTGS 255 (511)
T ss_pred CCCcHHHHHHHHHHHHHHcCCEEEEECCCCCcHHHHHHHHHHHHhCCCCCcEEEccCCCchhHHHHhcCCCCCeEEEECc
Confidence 99999999999999999999999999999999999999999999999999999999977788999999999999999999
Q ss_pred cHHHHHHHHHHHh-----cccceeEEEcCCCCCceEcCCCCHHHHHHHHHHHhhccCCCCcccCceEEEeCchHHHHHHH
Q 015042 160 TDVGRLVMQAAAA-----SNLKQVSLELGGKSPLLIFDDADLDTAADVALLGNLYNKGEICVASSRVFVQEGIYDKFEKK 234 (414)
Q Consensus 160 ~~~g~~i~~~~a~-----~~~~~~~~e~gg~~~~iV~~dadl~~aa~~i~~~~~~~~Gq~C~a~~~i~V~~~i~d~f~~~ 234 (414)
..+|+.|++.++. ++++|+++|+|||||+||++|||++.|++.+++++|.|+||.|+++++||||++++|+|+++
T Consensus 256 ~~~G~~i~~~aa~~~~~~~~~~~~~lElgG~~p~iV~~dAdl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~d~f~~~ 335 (511)
T TIGR01237 256 REVGCRIYEDAAKVQPGQKHLKRVIAEMGGKDAIIVDESADIEQAVAGAVYSAFGFTGQKCSACSRVVVLSPVYDAVVER 335 (511)
T ss_pred hHHHHHHHHHHhcccccccccceeEeccCCCCeEEECCCCCHHHHHHHHHHHHHhcCCCCcccceEEEEehhHHHHHHHH
Confidence 9999999988762 37899999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhhcccCCCCCCCCcccccCCHHHHHHHHHHHHHHHHcCCEEEeCCcccCCCCceeeeEEEeeCCCccccccccee
Q 015042 235 LLEKAKAWLVGDPFDPTVRQGPQISERHFDRILSYIEHGKREGATLLTGGKPIGDKGYYIEPTIFTNVKEDMIIAKEEIF 314 (414)
Q Consensus 235 l~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~f 314 (414)
|+++++++++|+|.++.+++||++++.+++++.+++++++++| ++++||....+.|+|+.|||+.+++++|.+++||+|
T Consensus 336 L~~~~~~l~~g~~~~~~~~~gpli~~~~~~~v~~~i~~a~~~g-~~l~gg~~~~~~g~~~~Ptvl~~~~~~~~i~~eE~F 414 (511)
T TIGR01237 336 FVEATRSLNVGPTDDPSTQVGPVIDQKSQAKIQEYIEQGKAEG-ELAIGGCDAPSEGYFIGPTIFKDVDRHARLAQEEIF 414 (511)
T ss_pred HHHHHHhCCCCCCCCCCCcCCCCCCHHHHHHHHHHHHHHHHCC-cEEECCccCCCCCeEEcCEEEeCCCCCChHhhCCCc
Confidence 9999999999999999999999999999999999999999888 888988765456899999999999999999999999
Q ss_pred cceEEEEeeCCHHHHHHHhhcCCCCceEEEecCCHHHHHHHHHhcceeEEEEcCcCCC--CCCCCcccCCCCCCCc-cch
Q 015042 315 GPVMALMKFKTVEEAIKSANNTQYGLAAGIVTKDLNVANTVSRSIRAGIIWINCYFGF--SMDCPYGGYKMSGFGR-EYG 391 (414)
Q Consensus 315 gPvl~v~~~~~~~eai~~~n~~~~gl~~sv~s~d~~~~~~~~~~l~~g~v~iN~~~~~--~~~~p~gG~~~sG~g~-~~g 391 (414)
|||++|++|+|++|||+++|+++|||++||||+|.+.++++++++++|+|+||+.... .+.+||||+|.||+|+ ++|
T Consensus 415 gPVl~v~~~~~~deai~~~n~~~~gL~a~i~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~~~PfGG~k~SG~G~~~~g 494 (511)
T TIGR01237 415 GPVVAIIRAADFDEALEIANGTEYGLTGGVYSNTRDHIERAAAEFEVGNLYFNRTITGAIVGRQPFGGFKMSGTDSKAGG 494 (511)
T ss_pred CCeEEEEeeCCHHHHHHHHhCCCCCCeEEEEcCCHHHHHHHHHhCCcceEEECCCCCCCCCCCCCCCccccccCCCcCCC
Confidence 9999999999999999999999999999999999999999999999999999988653 3568999999999995 789
Q ss_pred HHHHHhhheeeEEEeeC
Q 015042 392 LESLYKYLQIKSVVTPI 408 (414)
Q Consensus 392 ~~~~~~~~~~k~i~~~~ 408 (414)
++++++||++|+|+.++
T Consensus 495 ~~~l~~~~~~k~v~~~~ 511 (511)
T TIGR01237 495 PDYLLQFMQPKTVTENI 511 (511)
T ss_pred HHHHHHhcceEEEEEeC
Confidence 99999999999997653
|
This enzyme is the second of two in the degradation of proline to glutamate. This model represents one of several related branches of delta-1-pyrroline-5-carboxylate dehydrogenase. Members of this branch may be associated with proline dehydrogenase (the other enzyme of the pathway from proline to glutamate) but have not been demonstrated experimentally. The branches are not as closely related to each other as some distinct aldehyde dehydrogenases are to some; separate models were built to let each model describe a set of equivalogs. |
| >cd07123 ALDH_F4-17_P5CDH Delta(1)-pyrroline-5-carboxylate dehydrogenase, ALDH families 4 and 17 | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.1e-86 Score=675.06 Aligned_cols=406 Identities=29% Similarity=0.461 Sum_probs=375.1
Q ss_pred CHHHHHHHHH-hHHHHHHHHHHhcCCChHHHhhchHHHHHHHHHHHHHhhhhhcCccccc-CCCcccceeecCC-ceEEE
Q 015042 1 MWKFADLIEE-HVEELAALDALDAGKVYLRAKTAEIPGAAEFLRFFAGAADKIHGEVLKM-SSELQGYTLREPV-GVVGH 77 (414)
Q Consensus 1 L~~~a~~l~~-~~~~l~~~~~~etGk~~~e~~~~ei~~~~~~l~~~a~~~~~~~~~~~~~-~~~~~~~~~~~P~-Gvv~~ 77 (414)
|+++++.|++ ++++|++++++|+|||..++...|+..+++.+++++.++.+..+..... ..+...+++++|+ |||++
T Consensus 97 L~~~a~~l~~~~~~ela~~~~~e~Gk~~~~a~~~~v~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~~GVv~~ 176 (522)
T cd07123 97 FLKAADLLSGKYRYELNAATMLGQGKNVWQAEIDAACELIDFLRFNVKYAEELYAQQPLSSPAGVWNRLEYRPLEGFVYA 176 (522)
T ss_pred HHHHHHHHHhhCHHHHHHHHHHhcCCCHHHHhHHHHHHHHHHHHHHHHHHHHhcCccccCCCCCceeEEEEecCCceEEE
Confidence 5789999996 8999999999999999987655588999999999998887665443222 1245678899998 99999
Q ss_pred EcCCccchHHHHHhHHHHHhhCCeEEeecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhhHHHhhhCCCccEEEEe
Q 015042 78 IIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLTALYYAHLAKLAGIPDGVLNVVPGFGPTAGAAICSHMDIDYVCFT 157 (414)
Q Consensus 78 i~p~n~P~~~~~~~~~~aLaaGN~vv~kps~~~~~~~~~l~~~l~~aG~p~g~v~~v~~~~~~~~~~l~~~~~v~~v~~t 157 (414)
|+|||||+....+++++|| +||+||+|||+.+|+++..+.++|.++|+|+|+||++++++.+.++.|+.||+++.|.||
T Consensus 177 I~PwNfP~~~~~~~~~pal-aGN~VVlKPs~~tp~~~~~l~~~l~~aGlP~gvv~vv~g~~~~~g~~L~~~~~v~~V~FT 255 (522)
T cd07123 177 VSPFNFTAIGGNLAGAPAL-MGNVVLWKPSDTAVLSNYLVYKILEEAGLPPGVINFVPGDGPVVGDTVLASPHLAGLHFT 255 (522)
T ss_pred ECCcccHHHHHHHHHHHHH-hCCEEEEECCCCCCHHHHHHHHHHHHcCcCCCcEEEEecCchHHHHHHhcCCCcCEEEEE
Confidence 9999999999999999999 699999999999999999999999999999999999999777789999999999999999
Q ss_pred CCcHHHHHHHHHHHhcccc------eeEEEcCCCCCceEcCCCCHHHHHHHHHHHhhccCCCCcccCceEEEeCchHHHH
Q 015042 158 GSTDVGRLVMQAAAASNLK------QVSLELGGKSPLLIFDDADLDTAADVALLGNLYNKGEICVASSRVFVQEGIYDKF 231 (414)
Q Consensus 158 Gs~~~g~~i~~~~a~~~~~------~~~~e~gg~~~~iV~~dadl~~aa~~i~~~~~~~~Gq~C~a~~~i~V~~~i~d~f 231 (414)
||+.+|+.|++.++ ++++ ++++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|
T Consensus 256 GS~~~G~~i~~~aa-~~l~~~~~~~~v~lElGGkn~~IV~~dAdl~~Aa~~i~~~~f~~aGQ~C~a~~rv~V~~~i~d~f 334 (522)
T cd07123 256 GSTPTFKSLWKQIG-ENLDRYRTYPRIVGETGGKNFHLVHPSADVDSLVTATVRGAFEYQGQKCSAASRAYVPESLWPEV 334 (522)
T ss_pred CCHHHHHHHHHHHH-hhcccccccCCEEEECCCCCeeEECCCCCHHHHHHHHHHHHHhcCCCCCCCCcEEEEcHHHHHHH
Confidence 99999999999988 6766 8999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhhcccCCCCCCCCcccccCCHHHHHHHHHHHHHHHHc-CCEEEeCCcccCCCCceeeeEEEeeCCCcccccc
Q 015042 232 EKKLLEKAKAWLVGDPFDPTVRQGPQISERHFDRILSYIEHGKRE-GATLLTGGKPIGDKGYYIEPTIFTNVKEDMIIAK 310 (414)
Q Consensus 232 ~~~l~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~-ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~ 310 (414)
+++|+++++++++|+|.|+++++||+++..+++++++++++++++ |+++++||....+.|+|++|||+.+++++|.+++
T Consensus 335 ~~~l~~~~~~l~~G~p~d~~t~~Gpli~~~~~~~v~~~v~~a~~~~Ga~vl~gg~~~~~~g~f~~PTvl~~v~~~~~i~~ 414 (522)
T cd07123 335 KERLLEELKEIKMGDPDDFSNFMGAVIDEKAFDRIKGYIDHAKSDPEAEIIAGGKCDDSVGYFVEPTVIETTDPKHKLMT 414 (522)
T ss_pred HHHHHHHHhhCccCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEeCCCcCCCCCceEcCEEEeCCCCCChhhh
Confidence 999999999999999999999999999999999999999999999 9999999976444689999999999999999999
Q ss_pred cceecceEEEEeeCC--HHHHHHHhhcCC-CCceEEEecCCHHHHHHHHHhc--ceeEEEEcCcCC--CCCCCCcccCCC
Q 015042 311 EEIFGPVMALMKFKT--VEEAIKSANNTQ-YGLAAGIVTKDLNVANTVSRSI--RAGIIWINCYFG--FSMDCPYGGYKM 383 (414)
Q Consensus 311 ~E~fgPvl~v~~~~~--~~eai~~~n~~~-~gl~~sv~s~d~~~~~~~~~~l--~~g~v~iN~~~~--~~~~~p~gG~~~ 383 (414)
||+||||++|++|+| ++|||+++|++. |||++||||+|.+.+.++++++ ++|.|+||+... ..+.+||||+|.
T Consensus 415 eEiFGPVl~V~~~~~~~~~eai~~aN~~~~~gL~a~Vft~d~~~~~~~~~~l~~~~G~v~iN~~~~~~~~~~~PfGG~k~ 494 (522)
T cd07123 415 EEIFGPVLTVYVYPDSDFEETLELVDTTSPYALTGAIFAQDRKAIREATDALRNAAGNFYINDKPTGAVVGQQPFGGARA 494 (522)
T ss_pred cCCCCCeEEEEEeCCCCHHHHHHHHhCCCCcCceEEEEeCCHHHHHHHHHhhhhcCcEEEECCCCCCCCCCCCCCCcchh
Confidence 999999999999994 799999999985 9999999999999999999996 599999998764 345789999999
Q ss_pred CCCC-ccchHHHHHhhheeeEEEeeC
Q 015042 384 SGFG-REYGLESLYKYLQIKSVVTPI 408 (414)
Q Consensus 384 sG~g-~~~g~~~~~~~~~~k~i~~~~ 408 (414)
||+| +++|++++++|++.|++...+
T Consensus 495 SG~gg~~~g~~~l~~~~~~k~~~~~~ 520 (522)
T cd07123 495 SGTNDKAGSPLNLLRWVSPRTIKETF 520 (522)
T ss_pred cCCCcccCCHHHHHHhcceEEEEEec
Confidence 9996 999999999999999997754
|
Delta(1)-pyrroline-5-carboxylate dehydrogenase (EC=1.5.1.12 ), families 4 and 17: a proline catabolic enzyme of the aldehyde dehydrogenase (ALDH) protein superfamily. Delta(1)-pyrroline-5-carboxylate dehydrogenase (P5CDH), also known as ALDH4A1 in humans, is a mitochondrial homodimer involved in proline degradation and catalyzes the NAD + -dependent conversion of P5C to glutamate. This is a necessary step in the pathway interconnecting the urea and tricarboxylic acid cycles. The preferred substrate is glutamic gamma-semialdehyde, other substrates include succinic, glutaric and adipic semialdehydes. Also included in this CD is the Aldh17 Drosophila melanogaster (Q9VUC0) P5CDH and similar sequences. |
| >cd07101 ALDH_SSADH2_GabD2 Mycobacterium tuberculosis succinate-semialdehyde dehydrogenase 2-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.5e-86 Score=667.00 Aligned_cols=402 Identities=38% Similarity=0.622 Sum_probs=374.4
Q ss_pred CHHHHHHHHHhHHHHHHHHHHhcCCChHHHhhchHHHHHHHHHHHHHhhhhhcCccc-ccC--CCcccceeecCCceEEE
Q 015042 1 MWKFADLIEEHVEELAALDALDAGKVYLRAKTAEIPGAAEFLRFFAGAADKIHGEVL-KMS--SELQGYTLREPVGVVGH 77 (414)
Q Consensus 1 L~~~a~~l~~~~~~l~~~~~~etGk~~~e~~~~ei~~~~~~l~~~a~~~~~~~~~~~-~~~--~~~~~~~~~~P~Gvv~~ 77 (414)
|+++++.|++|+++|++++++|+||+..++ ..|+..+++.+++++..+++...... ... .....+.+++|+|||++
T Consensus 46 L~~~a~~l~~~~~el~~~~~~e~Gk~~~~a-~~ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GvV~~ 124 (454)
T cd07101 46 FLRFHDLVLERRDELLDLIQLETGKARRHA-FEEVLDVAIVARYYARRAERLLKPRRRRGAIPVLTRTTVNRRPKGVVGV 124 (454)
T ss_pred HHHHHHHHHHhHHHHHHHHHHHcCCcHHHH-HHHHHHHHHHHHHHHHHHHHHhCCccccccCCCCceEEEEEEeccEEEE
Confidence 578999999999999999999999999976 56999999999999988766543321 111 12456889999999999
Q ss_pred EcCCccchHHHHHhHHHHHhhCCeEEeecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhhHHHhhhCCCccEEEEe
Q 015042 78 IIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLTALYYAHLAKLAGIPDGVLNVVPGFGPTAGAAICSHMDIDYVCFT 157 (414)
Q Consensus 78 i~p~n~P~~~~~~~~~~aLaaGN~vv~kps~~~~~~~~~l~~~l~~aG~p~g~v~~v~~~~~~~~~~l~~~~~v~~v~~t 157 (414)
|+|||||+...++++++||++||+||+|||+.+|.++..+.+++.++|+|+|+++++++++.+.++.|+.| +|.|.||
T Consensus 125 I~p~N~P~~~~~~~~~~ALaaGN~vvlKps~~~p~~~~~l~~~~~~aglP~gv~~~v~g~~~~~~~~l~~~--~~~V~fT 202 (454)
T cd07101 125 ISPWNYPLTLAVSDAIPALLAGNAVVLKPDSQTALTALWAVELLIEAGLPRDLWQVVTGPGSEVGGAIVDN--ADYVMFT 202 (454)
T ss_pred ECCCccHHHHHHHHHHHHHHcCCEEEEECCccchHHHHHHHHHHHHcCcCCCcEEEEeCCcHHHHHHHHhC--CCEEEEE
Confidence 99999999999999999999999999999999999999999999999999999999999877888999987 4889999
Q ss_pred CCcHHHHHHHHHHHhcccceeEEEcCCCCCceEcCCCCHHHHHHHHHHHhhccCCCCcccCceEEEeCchHHHHHHHHHH
Q 015042 158 GSTDVGRLVMQAAAASNLKQVSLELGGKSPLLIFDDADLDTAADVALLGNLYNKGEICVASSRVFVQEGIYDKFEKKLLE 237 (414)
Q Consensus 158 Gs~~~g~~i~~~~a~~~~~~~~~e~gg~~~~iV~~dadl~~aa~~i~~~~~~~~Gq~C~a~~~i~V~~~i~d~f~~~l~~ 237 (414)
||+.+|+.|++.++ .+++|+++|+|||||+||++|||++.|++.+++++|.|+||.|+++++||||+++||+|+++|++
T Consensus 203 Gs~~~g~~i~~~aa-~~~~~~~lElgG~~p~iV~~dAdl~~a~~~i~~~~~~~sGQ~C~a~~rv~V~~~i~d~f~~~L~~ 281 (454)
T cd07101 203 GSTATGRVVAERAG-RRLIGCSLELGGKNPMIVLEDADLDKAAAGAVRACFSNAGQLCVSIERIYVHESVYDEFVRRFVA 281 (454)
T ss_pred CCHHHHHHHHHHHH-hcCCcEEEECCCCceEEECCCCCHHHHHHHHHHHHHhcCCCCcccCeEEEEcHHHHHHHHHHHHH
Confidence 99999999999988 88999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhhcccCCCCCCCCcccccCCHHHHHHHHHHHHHHHHcCCEEEeCCcccC-CCCceeeeEEEeeCCCcccccccceecc
Q 015042 238 KAKAWLVGDPFDPTVRQGPQISERHFDRILSYIEHGKREGATLLTGGKPIG-DKGYYIEPTIFTNVKEDMIIAKEEIFGP 316 (414)
Q Consensus 238 ~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~-~~g~~~~Ptvl~~~~~~~~~~~~E~fgP 316 (414)
+++++++|+|.++++++||+++..+++++++++++++++|+++++||...+ ..|+|++|||+.+++++|.+++||+|||
T Consensus 282 ~~~~~~~G~~~~~~~~~gpli~~~~~~~v~~~v~~a~~~Ga~vl~gg~~~~~~~~~~~~Ptvl~~v~~~~~~~~eE~FgP 361 (454)
T cd07101 282 RTRALRLGAALDYGPDMGSLISQAQLDRVTAHVDDAVAKGATVLAGGRARPDLGPYFYEPTVLTGVTEDMELFAEETFGP 361 (454)
T ss_pred HHhhCCCCCCCCCCCCcCCCCCHHHHHHHHHHHHHHHHCCCEEEeCCCCCCCCCCeEEcCEEEeCCCCCCHHHhCCCCCc
Confidence 999999999999999999999999999999999999999999999987533 2579999999999999999999999999
Q ss_pred eEEEEeeCCHHHHHHHhhcCCCCceEEEecCCHHHHHHHHHhcceeEEEEcCcCC---CCCCCCcccCCCCCCCccchHH
Q 015042 317 VMALMKFKTVEEAIKSANNTQYGLAAGIVTKDLNVANTVSRSIRAGIIWINCYFG---FSMDCPYGGYKMSGFGREYGLE 393 (414)
Q Consensus 317 vl~v~~~~~~~eai~~~n~~~~gl~~sv~s~d~~~~~~~~~~l~~g~v~iN~~~~---~~~~~p~gG~~~sG~g~~~g~~ 393 (414)
|++|++|+|+||||+++|+++|||++||||+|.+.++++++++++|.|+||++.. ..+.+||||+|.||+|+++|++
T Consensus 362 vl~v~~~~~~~eai~~~n~~~~gL~~~i~t~d~~~a~~~~~~l~~G~v~iN~~~~~~~~~~~~PfgG~k~SG~G~~~g~~ 441 (454)
T cd07101 362 VVSIYRVADDDEAIELANDTDYGLNASVWTRDGARGRRIAARLRAGTVNVNEGYAAAWASIDAPMGGMKDSGLGRRHGAE 441 (454)
T ss_pred eEEEEeeCCHHHHHHHHhCCCCCceEEEEcCCHHHHHHHHHhcCcceEEECCCCCcCcCCCCCCCCcccccccCccchHH
Confidence 9999999999999999999999999999999999999999999999999998754 3467899999999999999999
Q ss_pred HHHhhheeeEEEe
Q 015042 394 SLYKYLQIKSVVT 406 (414)
Q Consensus 394 ~~~~~~~~k~i~~ 406 (414)
|+++||+.|+|++
T Consensus 442 ~~~~~~~~k~v~~ 454 (454)
T cd07101 442 GLLKYTETQTVAV 454 (454)
T ss_pred HHHHhcceEEEeC
Confidence 9999999999863
|
Succinate-semialdehyde dehydrogenase 2 (SSADH2) and similar proteins are in this CD. SSADH1 (GabD1, EC=1.2.1.16) catalyzes the NADP(+)-dependent oxidation of succinate semialdehyde to succinate. SSADH activity in Mycobacterium tuberculosis is encoded by both gabD1 (Rv0234c) and gabD2 (Rv1731), however ,the Vmax of GabD1 was shown to be much higher than that of GabD2, and GabD2 (SSADH2) is likely to serve physiologically as a dehydrogenase for a different aldehyde(s). |
| >TIGR01236 D1pyr5carbox1 delta-1-pyrroline-5-carboxylate dehydrogenase, group 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.8e-86 Score=674.82 Aligned_cols=406 Identities=29% Similarity=0.441 Sum_probs=375.8
Q ss_pred CHHHHHHHH-HhHHHHHHHHHHhcCCChHHHhhchHHHHHHHHHHHHHhhhhhcCccc-ccCCCcccceeecCC-ceEEE
Q 015042 1 MWKFADLIE-EHVEELAALDALDAGKVYLRAKTAEIPGAAEFLRFFAGAADKIHGEVL-KMSSELQGYTLREPV-GVVGH 77 (414)
Q Consensus 1 L~~~a~~l~-~~~~~l~~~~~~etGk~~~e~~~~ei~~~~~~l~~~a~~~~~~~~~~~-~~~~~~~~~~~~~P~-Gvv~~ 77 (414)
|+++++.|+ +++++|++++++|+||+..++...++..+++.+++++.++++..+... ....+..++..++|+ |||++
T Consensus 97 L~k~a~~l~~~~~~~la~~~~~e~GK~~~~a~~e~v~~~i~~~~~~a~~a~~~~~~~~~~~~~~~~~~~~~~P~~GVv~~ 176 (533)
T TIGR01236 97 FLKAADLLSGPYREEILAATMLGQSKNVYQAEIDAVAELIDFFRFNVKYARELYEQQPSESAPGEWNRTDYRPLEGFVYA 176 (533)
T ss_pred HHHHHHHHHhhcHHHHHHHHHHHcCCcHHHHhHhHHHHHHHHHHHHHHHHHHhcCccccCCCCCceeEEEEecCCCEEEE
Confidence 578999999 599999999999999999986543499999999999988877655433 112345678899999 99999
Q ss_pred EcCCccchHHHHHhHHHHHhhCCeEEeecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhhHHHhhhCCCccEEEEe
Q 015042 78 IIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLTALYYAHLAKLAGIPDGVLNVVPGFGPTAGAAICSHMDIDYVCFT 157 (414)
Q Consensus 78 i~p~n~P~~~~~~~~~~aLaaGN~vv~kps~~~~~~~~~l~~~l~~aG~p~g~v~~v~~~~~~~~~~l~~~~~v~~v~~t 157 (414)
|+|||||+....+++++|| +||+||+|||+.+|+++..+.++|.++|+|+|+||++++++.+.++.|+.||+++.|.||
T Consensus 177 I~PwN~P~~~~~~~~a~AL-aGN~VVlKPs~~tp~~~~~l~~~~~~aGlP~gvv~vv~g~~~~~g~~Lv~~p~v~~V~FT 255 (533)
T TIGR01236 177 ISPFNFTAIAGNLPGAPAL-MGNTVIWKPSITATLSNYLTMRILEEAGLPPGVINFVPGDGFAVSDVVLADPRLAGIHFT 255 (533)
T ss_pred EeCCchHHHHHHHHHHHHH-hCCeEEEECCCcCCHHHHHHHHHHHhcCCCCCcEEEEecCcHHHHHHHhcCCCcCEEEEE
Confidence 9999999999999999999 799999999999999999999999999999999999999777889999999999999999
Q ss_pred CCcHHHHHHHHHHHhcccc------eeEEEcCCCCCceEcCCCCHHHHHHHHHHHhhccCCCCcccCceEEEeCchHHHH
Q 015042 158 GSTDVGRLVMQAAAASNLK------QVSLELGGKSPLLIFDDADLDTAADVALLGNLYNKGEICVASSRVFVQEGIYDKF 231 (414)
Q Consensus 158 Gs~~~g~~i~~~~a~~~~~------~~~~e~gg~~~~iV~~dadl~~aa~~i~~~~~~~~Gq~C~a~~~i~V~~~i~d~f 231 (414)
||..+|+.|++.++ ++++ ++++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|
T Consensus 256 GS~~~G~~i~~~aa-~~l~~~~~~~~v~lElGGknp~IV~~dADl~~Aa~~i~~~~f~~~GQ~C~a~~rv~V~~~i~d~f 334 (533)
T TIGR01236 256 GSTATFKHLWKWVA-SNLDRYHNFPRIVGETGGKDFHVVHPSADIDHAVTATIRGAFEYQGQKCSAASRLYVPHSVWPRF 334 (533)
T ss_pred CCHHHHHHHHHHHH-hhccccccCCcEEEEcCCCCeEEECCCCCHHHHHHHHHHHHHhhCCCCCcCCeeEEEchhHHHHH
Confidence 99999999999988 6666 4999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhhcccCCCCCCCCcccccCCHHHHHHHHHHHHHHHHcC--CEEEeCCcccCCCCceeeeEEEeeCCCccccc
Q 015042 232 EKKLLEKAKAWLVGDPFDPTVRQGPQISERHFDRILSYIEHGKREG--ATLLTGGKPIGDKGYYIEPTIFTNVKEDMIIA 309 (414)
Q Consensus 232 ~~~l~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~g--a~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~ 309 (414)
+++|+++++++++|+|.|+++++||+++..+++++.+++++++++| +++++||......|+|++|||+.+++++|.++
T Consensus 335 ~~~l~~~~~~l~~G~p~d~~t~~Gpli~~~~~~~v~~~i~~a~~~Ga~a~vl~GG~~~~~~G~~~~PTvl~~~~~d~~i~ 414 (533)
T TIGR01236 335 KDELLAELAEVKVGDPDDFSNFMGAVIDERSFVKNVKYIERAKGDPAELTILYGGKYDDSEGYFVEPTVILSKDPTDPLM 414 (533)
T ss_pred HHHHHHHHhcCCcCCCCCCCCcccccCCHHHHHHHHHHHHHHHhcCCceEEEeCCCcCCCCCeEEeeEEEecCCCCChhh
Confidence 9999999999999999999999999999999999999999999987 79999997644468999999999999999999
Q ss_pred ccceecceEEEEeeCC--HHHHHHHh-hcCCCCceEEEecCCHHHHHHHHHhcc--eeEEEEcCcCC--CCCCCCcccCC
Q 015042 310 KEEIFGPVMALMKFKT--VEEAIKSA-NNTQYGLAAGIVTKDLNVANTVSRSIR--AGIIWINCYFG--FSMDCPYGGYK 382 (414)
Q Consensus 310 ~~E~fgPvl~v~~~~~--~~eai~~~-n~~~~gl~~sv~s~d~~~~~~~~~~l~--~g~v~iN~~~~--~~~~~p~gG~~ 382 (414)
+||+||||++|++|+| ++||++++ |+++|||++||||+|.+.+.+++++++ +|.|+||+... ..+.+||||+|
T Consensus 415 ~eE~FGPVl~v~~~~~~~~~eai~~~~n~~~~gL~a~Vft~d~~~a~~~~~~l~~~~G~v~IN~~~~~~~~~~~PfGG~k 494 (533)
T TIGR01236 415 VEEIFGPVLTVYVYPDDKYKEILDVVDSTSRYGLTGAVFAKDRQAILEADKRLRFAAGNFYINDKPTGAVVGQQPFGGAR 494 (533)
T ss_pred cccCCCCeEEEEEeCCCCHHHHHHHHhcCCCcCceEEEEeCCHHHHHHHHHHhhhcCcEEEECCCCCCCCCCCCCCCCcc
Confidence 9999999999999998 59999999 889999999999999999999999977 99999997654 34678999999
Q ss_pred CCCCC-ccchHHHHHhhheeeEEEeeC
Q 015042 383 MSGFG-REYGLESLYKYLQIKSVVTPI 408 (414)
Q Consensus 383 ~sG~g-~~~g~~~~~~~~~~k~i~~~~ 408 (414)
.||+| +++|.+|+++|+++|++...+
T Consensus 495 ~SG~G~~~~g~~~l~~f~~~k~v~~~~ 521 (533)
T TIGR01236 495 GSGTNDKAGGPLNLLRWTSARSIKETF 521 (533)
T ss_pred cccCCcccCCHHHHHHhcceEEEEEEc
Confidence 99998 999999999999999998775
|
This model represents one of two related branches of delta-1-pyrroline-5-carboxylate dehydrogenase. The two branches are not as closely related to each other as some aldehyde dehydrogenases are to this branch, and separate models are built for this reason. The enzyme is the second of two in the degradation of proline to glutamate. |
| >cd07139 ALDH_AldA-Rv0768 Mycobacterium tuberculosis aldehyde dehydrogenase AldA-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.9e-86 Score=670.13 Aligned_cols=402 Identities=41% Similarity=0.702 Sum_probs=377.6
Q ss_pred CHHHHHHHHHhHHHHHHHHHHhcCCChHHHhhchHHHHHHHHHHHHHhhhhhcCcc-cccCCCcccceeecCCceEEEEc
Q 015042 1 MWKFADLIEEHVEELAALDALDAGKVYLRAKTAEIPGAAEFLRFFAGAADKIHGEV-LKMSSELQGYTLREPVGVVGHII 79 (414)
Q Consensus 1 L~~~a~~l~~~~~~l~~~~~~etGk~~~e~~~~ei~~~~~~l~~~a~~~~~~~~~~-~~~~~~~~~~~~~~P~Gvv~~i~ 79 (414)
|+++++.|++|+++|++++++|+|||..++...|+..+++.+++++...++..+.. .+...+...+.+++|+|||++|+
T Consensus 66 L~~~a~~l~~~~~ela~~~~~e~Gk~~~~~~~~ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~I~ 145 (471)
T cd07139 66 LRRLADALEARADELARLWTAENGMPISWSRRAQGPGPAALLRYYAALARDFPFEERRPGSGGGHVLVRREPVGVVAAIV 145 (471)
T ss_pred HHHHHHHHHHhHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCccccCCCCceEEEEEEeccEEEEEc
Confidence 57899999999999999999999999977666699999999999998876654322 22222445688999999999999
Q ss_pred CCccchHHHHHhHHHHHhhCCeEEeecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhhHHHhhhCCCccEEEEeCC
Q 015042 80 PWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLTALYYAHLAKLAGIPDGVLNVVPGFGPTAGAAICSHMDIDYVCFTGS 159 (414)
Q Consensus 80 p~n~P~~~~~~~~~~aLaaGN~vv~kps~~~~~~~~~l~~~l~~aG~p~g~v~~v~~~~~~~~~~l~~~~~v~~v~~tGs 159 (414)
|||||+...++++++||++||+||+|||+.+|+++..+.++|.++|+|+|+++++++ +.+.++.|+.|++++.|.||||
T Consensus 146 p~N~P~~~~~~~i~~ALaaGN~VvlKps~~~p~~~~~l~~~~~~aglP~gv~~~v~g-~~~~~~~l~~~~~i~~v~ftGs 224 (471)
T cd07139 146 PWNAPLFLAALKIAPALAAGCTVVLKPSPETPLDAYLLAEAAEEAGLPPGVVNVVPA-DREVGEYLVRHPGVDKVSFTGS 224 (471)
T ss_pred CCchHHHHHHHHHHHHHhcCCEEEEECCCcCCHHHHHHHHHHHHcCCCCCcEEEEeC-CHHHHHHHhcCCCCCEEEEECc
Confidence 999999999999999999999999999999999999999999999999999999998 5678899999999999999999
Q ss_pred cHHHHHHHHHHHhcccceeEEEcCCCCCceEcCCCCHHHHHHHHHHHhhccCCCCcccCceEEEeCchHHHHHHHHHHHH
Q 015042 160 TDVGRLVMQAAAASNLKQVSLELGGKSPLLIFDDADLDTAADVALLGNLYNKGEICVASSRVFVQEGIYDKFEKKLLEKA 239 (414)
Q Consensus 160 ~~~g~~i~~~~a~~~~~~~~~e~gg~~~~iV~~dadl~~aa~~i~~~~~~~~Gq~C~a~~~i~V~~~i~d~f~~~l~~~~ 239 (414)
+.+|+.|.+.++ .+++|+++|+||+||+||++|||++.|++.+++++|.++||.|+++++||||++++|+|+++|++++
T Consensus 225 ~~~g~~v~~~~~-~~~~~~~lElGG~np~iV~~dADl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~ 303 (471)
T cd07139 225 TAAGRRIAAVCG-ERLARVTLELGGKSAAIVLDDADLDAAVPGLVPASLMNNGQVCVALTRILVPRSRYDEVVEALAAAV 303 (471)
T ss_pred HHHHHHHHHHHH-hcCCEEEEEcCCCCeeEECCCCCHHHHHHHHHHHHHhcCCCCCcCCcEEEEeHhHHHHHHHHHHHHH
Confidence 999999999988 8899999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhcccCCCCCCCCcccccCCHHHHHHHHHHHHHHHHcCCEEEeCCcccC--CCCceeeeEEEeeCCCcccccccceecce
Q 015042 240 KAWLVGDPFDPTVRQGPQISERHFDRILSYIEHGKREGATLLTGGKPIG--DKGYYIEPTIFTNVKEDMIIAKEEIFGPV 317 (414)
Q Consensus 240 ~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~--~~g~~~~Ptvl~~~~~~~~~~~~E~fgPv 317 (414)
+++++|+|.++++++||++++.+++++++++++++.+|+++++||.... ..|+|+.|||+.++++++++++||+||||
T Consensus 304 ~~~~~g~p~~~~~~~gpli~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~~~~~~~~~~Ptvl~~v~~~~~~~~eE~FgPv 383 (471)
T cd07139 304 AALKVGDPLDPATQIGPLASARQRERVEGYIAKGRAEGARLVTGGGRPAGLDRGWFVEPTLFADVDNDMRIAQEEIFGPV 383 (471)
T ss_pred HhCCcCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCEEEeCCCcCCCCCCCeEEccEEEecCCCcchHHhCccCCCe
Confidence 9999999999999999999999999999999999999999999997643 35899999999999999999999999999
Q ss_pred EEEEeeCCHHHHHHHhhcCCCCceEEEecCCHHHHHHHHHhcceeEEEEcCcCCCCCCCCcccCCCCCCCccchHHHHHh
Q 015042 318 MALMKFKTVEEAIKSANNTQYGLAAGIVTKDLNVANTVSRSIRAGIIWINCYFGFSMDCPYGGYKMSGFGREYGLESLYK 397 (414)
Q Consensus 318 l~v~~~~~~~eai~~~n~~~~gl~~sv~s~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~p~gG~~~sG~g~~~g~~~~~~ 397 (414)
++|++|+|++||++++|++++||+++|||+|.+.+.++++++++|.|+||++. ..+.+||||+|.||+|+++|++|+++
T Consensus 384 l~v~~~~~~~eai~~~n~~~~gL~a~i~s~d~~~~~~~~~~l~~G~v~iN~~~-~~~~~PfgG~k~SG~G~~~g~~~~~~ 462 (471)
T cd07139 384 LSVIPYDDEDDAVRIANDSDYGLSGSVWTADVERGLAVARRIRTGTVGVNGFR-LDFGAPFGGFKQSGIGREGGPEGLDA 462 (471)
T ss_pred EEEeecCCHHHHHHHHhCCCCCceEEEEcCCHHHHHHHHHhCCcceEEECCCC-CCCCCCCCCcccccCCccchHHHHHH
Confidence 99999999999999999999999999999999999999999999999999976 56789999999999999999999999
Q ss_pred hheeeEEE
Q 015042 398 YLQIKSVV 405 (414)
Q Consensus 398 ~~~~k~i~ 405 (414)
||++|+|+
T Consensus 463 ft~~k~i~ 470 (471)
T cd07139 463 YLETKSIY 470 (471)
T ss_pred HhceeEEe
Confidence 99999985
|
The Mycobacterium tuberculosis NAD+-dependent, aldehyde dehydrogenase PDB structure, 3B4W, and the Mycobacterium tuberculosis H37Rv aldehyde dehydrogenase AldA (locus Rv0768) sequence, as well as the Rhodococcus rhodochrous ALDH involved in haloalkane catabolism, and other similar sequences, are included in this CD. |
| >cd07150 ALDH_VaniDH_like Pseudomonas putida vanillin dehydrogenase-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.5e-86 Score=667.45 Aligned_cols=400 Identities=40% Similarity=0.662 Sum_probs=379.1
Q ss_pred CHHHHHHHHHhHHHHHHHHHHhcCCChHHHhhchHHHHHHHHHHHHHhhhhhcCcccccC-CCcccceeecCCceEEEEc
Q 015042 1 MWKFADLIEEHVEELAALDALDAGKVYLRAKTAEIPGAAEFLRFFAGAADKIHGEVLKMS-SELQGYTLREPVGVVGHII 79 (414)
Q Consensus 1 L~~~a~~l~~~~~~l~~~~~~etGk~~~e~~~~ei~~~~~~l~~~a~~~~~~~~~~~~~~-~~~~~~~~~~P~Gvv~~i~ 79 (414)
|+++++.|++++++|++++++|+|||..++ ..|+..+++.+++++.+.++..+...+.. .+...+.+++|+|||++|+
T Consensus 49 L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a-~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~ 127 (451)
T cd07150 49 LLKAAEIMERRADDLIDLLIDEGGSTYGKA-WFETTFTPELLRAAAGECRRVRGETLPSDSPGTVSMSVRRPLGVVAGIT 127 (451)
T ss_pred HHHHHHHHHHhHHHHHHHHHHhcCCCHHHH-HHHHHHHHHHHHHHHHHHHHhcCccccCCCCCceeEEEEecccEEEEEC
Confidence 578999999999999999999999999875 45999999999999988877655544433 4556789999999999999
Q ss_pred CCccchHHHHHhHHHHHhhCCeEEeecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhhHHHhhhCCCccEEEEeCC
Q 015042 80 PWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLTALYYAHLAKLAGIPDGVLNVVPGFGPTAGAAICSHMDIDYVCFTGS 159 (414)
Q Consensus 80 p~n~P~~~~~~~~~~aLaaGN~vv~kps~~~~~~~~~l~~~l~~aG~p~g~v~~v~~~~~~~~~~l~~~~~v~~v~~tGs 159 (414)
|||||+...++++++||++||+||+|||+.+|.++..+.+++.++|+|+|+++++++++.+.++.|+.|+++|.|.||||
T Consensus 128 P~N~P~~~~~~~~~~ALaaGN~VilKps~~~p~t~~~l~~~~~~ag~P~g~v~~v~g~~~~~~~~l~~~~~v~~V~ftGs 207 (451)
T cd07150 128 PFNYPLILATKKVAFALAAGNTVVLKPSEETPVIGLKIAEIMEEAGLPKGVFNVVTGGGAEVGDELVDDPRVRMVTFTGS 207 (451)
T ss_pred CCccHHHHHHHHHHHHHhcCCeEEEECCccCcHHHHHHHHHHHHhCCCcCcEEEeeCCCcHHHHHHhcCCCCCEEEEECc
Confidence 99999999999999999999999999999999999999999999999999999999877788999999999999999999
Q ss_pred cHHHHHHHHHHHhcccceeEEEcCCCCCceEcCCCCHHHHHHHHHHHhhccCCCCcccCceEEEeCchHHHHHHHHHHHH
Q 015042 160 TDVGRLVMQAAAASNLKQVSLELGGKSPLLIFDDADLDTAADVALLGNLYNKGEICVASSRVFVQEGIYDKFEKKLLEKA 239 (414)
Q Consensus 160 ~~~g~~i~~~~a~~~~~~~~~e~gg~~~~iV~~dadl~~aa~~i~~~~~~~~Gq~C~a~~~i~V~~~i~d~f~~~l~~~~ 239 (414)
+.+|+.|.+.++ ++++|+++|+|||||+||++|||++.|++.+++++|.|+||.|+++++||||++++|+|+++|++++
T Consensus 208 ~~~g~~i~~~aa-~~~~~~~lelGG~~~~iV~~dadl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~~~f~~~l~~~~ 286 (451)
T cd07150 208 TAVGREIAEKAG-RHLKKITLELGGKNPLIVLADADLDYAVRAAAFGAFMHQGQICMSASRIIVEEPVYDEFVKKFVARA 286 (451)
T ss_pred HHHHHHHHHHHh-hcCCceEeecCCCCeeEECCCCChHHHHHHHHHHHHhhcCCCCCCCeeEEEcHHHHHHHHHHHHHHH
Confidence 999999999988 8899999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhcccCCCCCCCCcccccCCHHHHHHHHHHHHHHHHcCCEEEeCCcccCCCCceeeeEEEeeCCCcccccccceecceEE
Q 015042 240 KAWLVGDPFDPTVRQGPQISERHFDRILSYIEHGKREGATLLTGGKPIGDKGYYIEPTIFTNVKEDMIIAKEEIFGPVMA 319 (414)
Q Consensus 240 ~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~ 319 (414)
+++++|+|.++++++||+++..+++++.+++++++.+|+++++||.. +|+|++|||+.+++++|.+++||+||||++
T Consensus 287 ~~~~~g~p~~~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~vl~gg~~---~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~ 363 (451)
T cd07150 287 SKLKVGDPRDPDTVIGPLISPRQVERIKRQVEDAVAKGAKLLTGGKY---DGNFYQPTVLTDVTPDMRIFREETFGPVTS 363 (451)
T ss_pred HhcCCCCCCCCCCCCCCCcCHHHHHHHHHHHHHHHhCCCEEEeCCcc---CCcEEcCEEEeCCCCCCHHHhCCCcCceEE
Confidence 99999999999999999999999999999999999999999999865 589999999999999999999999999999
Q ss_pred EEeeCCHHHHHHHhhcCCCCceEEEecCCHHHHHHHHHhcceeEEEEcCcCCCC-CCCCcccCCCCCCCccchHHHHHhh
Q 015042 320 LMKFKTVEEAIKSANNTQYGLAAGIVTKDLNVANTVSRSIRAGIIWINCYFGFS-MDCPYGGYKMSGFGREYGLESLYKY 398 (414)
Q Consensus 320 v~~~~~~~eai~~~n~~~~gl~~sv~s~d~~~~~~~~~~l~~g~v~iN~~~~~~-~~~p~gG~~~sG~g~~~g~~~~~~~ 398 (414)
|++|+|++|||+++|+++|||++||||+|.++++++++++++|.|+||++.... +.+||||+|.||+|+++|++|+++|
T Consensus 364 v~~~~~~~eai~~~n~~~~gL~a~v~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~~pfgG~~~SG~G~~~g~~~l~~~ 443 (451)
T cd07150 364 VIPAKDAEEALELANDTEYGLSAAILTNDLQRAFKLAERLESGMVHINDPTILDEAHVPFGGVKASGFGREGGEWSMEEF 443 (451)
T ss_pred EEEeCCHHHHHHHHhCCCCCCeEEEEeCCHHHHHHHHHhcCcCEEEECCCCCCCCCCCCcCCccccccCcCCcHHHHHHh
Confidence 999999999999999999999999999999999999999999999999987644 6789999999999999999999999
Q ss_pred heeeEEE
Q 015042 399 LQIKSVV 405 (414)
Q Consensus 399 ~~~k~i~ 405 (414)
|++|+|+
T Consensus 444 ~~~k~v~ 450 (451)
T cd07150 444 TELKWIT 450 (451)
T ss_pred heeeEEe
Confidence 9999985
|
Vanillin dehydrogenase (Vdh, VaniDH) involved in the metabolism of ferulic acid and other related sequences are included in this CD. The E. coli vanillin dehydrogenase (LigV) preferred NAD+ to NADP+ and exhibited a broad substrate preference, including vanillin, benzaldehyde, protocatechualdehyde, m-anisaldehyde, and p-hydroxybenzaldehyde. |
| >cd07131 ALDH_AldH-CAJ73105 Uncharacterized Candidatus kuenenia aldehyde dehydrogenase AldH (CAJ73105)-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-85 Score=669.63 Aligned_cols=406 Identities=42% Similarity=0.710 Sum_probs=380.8
Q ss_pred CHHHHHHHHHhHHHHHHHHHHhcCCChHHHhhchHHHHHHHHHHHHHhhhhhcCcccccC-CCcccceeecCCceEEEEc
Q 015042 1 MWKFADLIEEHVEELAALDALDAGKVYLRAKTAEIPGAAEFLRFFAGAADKIHGEVLKMS-SELQGYTLREPVGVVGHII 79 (414)
Q Consensus 1 L~~~a~~l~~~~~~l~~~~~~etGk~~~e~~~~ei~~~~~~l~~~a~~~~~~~~~~~~~~-~~~~~~~~~~P~Gvv~~i~ 79 (414)
|+++++.|.+++++|++++++|+|||..++. .|+..+++.+++++...+...+...+.. .+...+.+++|+|||++|+
T Consensus 65 l~~~a~~l~~~~~ela~~~~~e~Gk~~~~~~-~ev~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~ 143 (478)
T cd07131 65 LFRAAELLKKRKEELARLVTREMGKPLAEGR-GDVQEAIDMAQYAAGEGRRLFGETVPSELPNKDAMTRRQPIGVVALIT 143 (478)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHcCCCHHHHH-HHHHHHHHHHHHHHHHHHHhCCcccccCCCCceEEEEeeceeEEEEEC
Confidence 5789999999999999999999999999865 5999999999999988776555433322 2345689999999999999
Q ss_pred CCccchHHHHHhHHHHHhhCCeEEeecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhhHHHhhhCCCccEEEEeCC
Q 015042 80 PWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLTALYYAHLAKLAGIPDGVLNVVPGFGPTAGAAICSHMDIDYVCFTGS 159 (414)
Q Consensus 80 p~n~P~~~~~~~~~~aLaaGN~vv~kps~~~~~~~~~l~~~l~~aG~p~g~v~~v~~~~~~~~~~l~~~~~v~~v~~tGs 159 (414)
|||||+..+++++++||++||+||+|||+.+|.++..+.++|.++|+|+|+++++++++.+.++.|+.||++|.|.||||
T Consensus 144 p~N~P~~~~~~~~~~ALaaGN~VvlKps~~~p~~~~~l~~~l~~aGlP~gvv~~v~g~~~~~~~~L~~~~~vd~V~ftGs 223 (478)
T cd07131 144 PWNFPVAIPSWKIFPALVCGNTVVFKPAEDTPACALKLVELFAEAGLPPGVVNVVHGRGEEVGEALVEHPDVDVVSFTGS 223 (478)
T ss_pred CcCcHHHHHHHHHHHHHHcCCEEEEECCCcCcHHHHHHHHHHHhcCcCCCcEEEEecCchHHHHHHhcCCCCCEEEEECc
Confidence 99999999999999999999999999999999999999999999999999999999977678999999999999999999
Q ss_pred cHHHHHHHHHHHhcccceeEEEcCCCCCceEcCCCCHHHHHHHHHHHhhccCCCCcccCceEEEeCchHHHHHHHHHHHH
Q 015042 160 TDVGRLVMQAAAASNLKQVSLELGGKSPLLIFDDADLDTAADVALLGNLYNKGEICVASSRVFVQEGIYDKFEKKLLEKA 239 (414)
Q Consensus 160 ~~~g~~i~~~~a~~~~~~~~~e~gg~~~~iV~~dadl~~aa~~i~~~~~~~~Gq~C~a~~~i~V~~~i~d~f~~~l~~~~ 239 (414)
+.+|+.|.+.++ ++++|+++|+|||||+||++|||++.|++.+++++|.|+||.|+++++||||+++||+|+++|++++
T Consensus 224 ~~~g~~i~~~aa-~~~~~~~lelgG~~p~iV~~dADl~~Aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~~~f~~~l~~~~ 302 (478)
T cd07131 224 TEVGERIGETCA-RPNKRVALEMGGKNPIIVMDDADLDLALEGALWSAFGTTGQRCTATSRLIVHESVYDEFLKRFVERA 302 (478)
T ss_pred HHHHHHHHHHHh-hcCCcEEEECCCCCeEEECCCCCHHHHHHHHHHHHHhcCCCCCCCCeEEEEehhhHHHHHHHHHHHH
Confidence 999999999988 8899999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhcccCCCCCCCCcccccCCHHHHHHHHHHHHHHHHcCCEEEeCCcccC----CCCceeeeEEEeeCCCcccccccceec
Q 015042 240 KAWLVGDPFDPTVRQGPQISERHFDRILSYIEHGKREGATLLTGGKPIG----DKGYYIEPTIFTNVKEDMIIAKEEIFG 315 (414)
Q Consensus 240 ~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~----~~g~~~~Ptvl~~~~~~~~~~~~E~fg 315 (414)
+++++|+|.++++++||++++.+++++++++++++.+|+++++||.... ..|+|++|||+.+++++++++++|+||
T Consensus 303 ~~~~~g~p~~~~~~~gpli~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~Fg 382 (478)
T cd07131 303 KRLRVGDGLDEETDMGPLINEAQLEKVLNYNEIGKEEGATLLLGGERLTGGGYEKGYFVEPTVFTDVTPDMRIAQEEIFG 382 (478)
T ss_pred HhcCCCCCCCCCCcCCcCCCHHHHHHHHHHHHHHHHCCCEEEeCCCccccccCCCCceECCEEEeCCCCCChHhhCCCcC
Confidence 9999999999999999999999999999999999999999999997642 368999999999999999999999999
Q ss_pred ceEEEEeeCCHHHHHHHhhcCCCCceEEEecCCHHHHHHHHHhcceeEEEEcCcCC-CCCCCCcccCCCCCCC-ccchHH
Q 015042 316 PVMALMKFKTVEEAIKSANNTQYGLAAGIVTKDLNVANTVSRSIRAGIIWINCYFG-FSMDCPYGGYKMSGFG-REYGLE 393 (414)
Q Consensus 316 Pvl~v~~~~~~~eai~~~n~~~~gl~~sv~s~d~~~~~~~~~~l~~g~v~iN~~~~-~~~~~p~gG~~~sG~g-~~~g~~ 393 (414)
||++|++|+|++|||+++|+++|||++||||+|.+.++++++++++|+|+||++.. ..+.+||||+|.||+| +++|.+
T Consensus 383 Pvl~v~~~~~~~eai~~~n~~~~gL~~~v~t~d~~~a~~~~~~l~~G~v~iN~~~~~~~~~~pfgG~k~SG~G~~~~g~~ 462 (478)
T cd07131 383 PVVALIEVSSLEEAIEIANDTEYGLSSAIYTEDVNKAFRARRDLEAGITYVNAPTIGAEVHLPFGGVKKSGNGHREAGTT 462 (478)
T ss_pred CeEEEEEeCCHHHHHHHHhCCCCcceEEEEcCCHHHHHHHHHhcCccEEEECCCCCCCCCCCCCCCcccccCCCcCCcHH
Confidence 99999999999999999999999999999999999999999999999999999866 3578999999999999 788999
Q ss_pred HHHhhheeeEEEeeC
Q 015042 394 SLYKYLQIKSVVTPI 408 (414)
Q Consensus 394 ~~~~~~~~k~i~~~~ 408 (414)
|+++||+.|+|+++.
T Consensus 463 ~~~~f~~~k~i~~~~ 477 (478)
T cd07131 463 ALDAFTEWKAVYVDY 477 (478)
T ss_pred HHHHhhheEEEEEeC
Confidence 999999999998763
|
Uncharacterized aldehyde dehydrogenase of Candidatus kuenenia AldH (locus CAJ73105) and similar sequences with similarity to alpha-aminoadipic semialdehyde dehydrogenase (AASADH, human ALDH7A1, EC=1.2.1.31), Arabidopsis ALDH7B4, and Streptomyces clavuligerus delta-1-piperideine-6-carboxylate dehydrogenase (P6CDH) are included in this CD. |
| >cd07138 ALDH_CddD_SSP0762 Rhodococcus ruber 6-oxolauric acid dehydrogenase-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-85 Score=667.99 Aligned_cols=399 Identities=42% Similarity=0.702 Sum_probs=375.9
Q ss_pred CHHHHHHHHHhHHHHHHHHHHhcCCChHHHhhchHHHHHHHHHHHHHhhhhhcCcccccCCCcccceeecCCceEEEEcC
Q 015042 1 MWKFADLIEEHVEELAALDALDAGKVYLRAKTAEIPGAAEFLRFFAGAADKIHGEVLKMSSELQGYTLREPVGVVGHIIP 80 (414)
Q Consensus 1 L~~~a~~l~~~~~~l~~~~~~etGk~~~e~~~~ei~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p 80 (414)
|+++++.|++|+++|++++++|+|||..++...|+..+++.+++++...++..+... ....+.+++|+|||++|+|
T Consensus 64 L~~~a~~l~~~~~~la~~~~~e~Gk~~~~~~~~ev~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~P~GVv~~I~p 139 (466)
T cd07138 64 LERIAEAYEARADELAQAITLEMGAPITLARAAQVGLGIGHLRAAADALKDFEFEER----RGNSLVVREPIGVCGLITP 139 (466)
T ss_pred HHHHHHHHHHhHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHhhhhcccccc----CceEEEEEeecceEEEECC
Confidence 578999999999999999999999999877656999999999999987766533221 2345778999999999999
Q ss_pred CccchHHHHHhHHHHHhhCCeEEeecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhhHHHhhhCCCccEEEEeCCc
Q 015042 81 WNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLTALYYAHLAKLAGIPDGVLNVVPGFGPTAGAAICSHMDIDYVCFTGST 160 (414)
Q Consensus 81 ~n~P~~~~~~~~~~aLaaGN~vv~kps~~~~~~~~~l~~~l~~aG~p~g~v~~v~~~~~~~~~~l~~~~~v~~v~~tGs~ 160 (414)
||||+..+++++++||++||+||+|||+.+|+++..+.++|.++|+|+|+++++++++.+.++.|+.||+++.|.||||+
T Consensus 140 ~N~P~~~~~~~~~~ALaaGN~Vv~Kps~~~p~~~~~l~~~~~~aGlP~g~v~~v~g~~~~~~~~l~~~~~v~~v~fTGs~ 219 (466)
T cd07138 140 WNWPLNQIVLKVAPALAAGCTVVLKPSEVAPLSAIILAEILDEAGLPAGVFNLVNGDGPVVGEALSAHPDVDMVSFTGST 219 (466)
T ss_pred CccHHHHHHHHHHHHHhcCCEEEEECCCcCcHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHHhcCCCCCEEEEECcH
Confidence 99999999999999999999999999999999999999999999999999999998777789999999999999999999
Q ss_pred HHHHHHHHHHHhcccceeEEEcCCCCCceEcCCCCHHHHHHHHHHHhhccCCCCcccCceEEEeCchHHHHHHHHHHHHh
Q 015042 161 DVGRLVMQAAAASNLKQVSLELGGKSPLLIFDDADLDTAADVALLGNLYNKGEICVASSRVFVQEGIYDKFEKKLLEKAK 240 (414)
Q Consensus 161 ~~g~~i~~~~a~~~~~~~~~e~gg~~~~iV~~dadl~~aa~~i~~~~~~~~Gq~C~a~~~i~V~~~i~d~f~~~l~~~~~ 240 (414)
.+|+.|.+.++ .+++|+++|+|||||+||++|||++.|++.+++++|.++||.|+++++||||++++|+|++.|+++++
T Consensus 220 ~~g~~i~~~aa-~~~~~v~lElgG~~p~iV~~dADl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~ 298 (466)
T cd07138 220 RAGKRVAEAAA-DTVKRVALELGGKSANIILDDADLEKAVPRGVAACFANSGQSCNAPTRMLVPRSRYAEAEEIAAAAAE 298 (466)
T ss_pred HHHHHHHHHHh-ccCCeEEEECCCCCeeEECCCCCHHHHHHHHHHHHHhccCCCCcCCcEEEEeHhHHHHHHHHHHHHHH
Confidence 99999999988 88999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hcccCCCCCCCCcccccCCHHHHHHHHHHHHHHHHcCCEEEeCCcccC---CCCceeeeEEEeeCCCcccccccceecce
Q 015042 241 AWLVGDPFDPTVRQGPQISERHFDRILSYIEHGKREGATLLTGGKPIG---DKGYYIEPTIFTNVKEDMIIAKEEIFGPV 317 (414)
Q Consensus 241 ~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~---~~g~~~~Ptvl~~~~~~~~~~~~E~fgPv 317 (414)
++++|+|.++++++||++++.+++++++++++++++|+++++||...+ ..|+|+.|||+.++++++++++||+||||
T Consensus 299 ~~~~g~p~~~~~~~gpli~~~~~~~~~~~v~~a~~~Ga~~l~gg~~~~~~~~~g~~~~Ptvl~~~~~~~~i~~eE~fgPv 378 (466)
T cd07138 299 AYVVGDPRDPATTLGPLASAAQFDRVQGYIQKGIEEGARLVAGGPGRPEGLERGYFVKPTVFADVTPDMTIAREEIFGPV 378 (466)
T ss_pred hcCCCCCCCCCCcCCccCCHHHHHHHHHHHHHHHHCCCEEEeCCCcCCCcCCCCceECCEEecCCCCCChHHhCCCCCce
Confidence 999999999999999999999999999999999999999999997432 35899999999999999999999999999
Q ss_pred EEEEeeCCHHHHHHHhhcCCCCceEEEecCCHHHHHHHHHhcceeEEEEcCcCCCCCCCCcccCCCCCCCccchHHHHHh
Q 015042 318 MALMKFKTVEEAIKSANNTQYGLAAGIVTKDLNVANTVSRSIRAGIIWINCYFGFSMDCPYGGYKMSGFGREYGLESLYK 397 (414)
Q Consensus 318 l~v~~~~~~~eai~~~n~~~~gl~~sv~s~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~p~gG~~~sG~g~~~g~~~~~~ 397 (414)
++|++|+|.|||++++|+++|||+++|||+|.+.++++++++++|+|+||+.. ..+.+||||+|.||+|+++|++++++
T Consensus 379 l~v~~~~~~~eai~~~n~~~~gL~a~i~t~d~~~a~~~~~~l~~G~v~iN~~~-~~~~~PfgG~k~SG~G~~~g~~~~~~ 457 (466)
T cd07138 379 LSIIPYDDEDEAIAIANDTPYGLAGYVWSADPERARAVARRLRAGQVHINGAA-FNPGAPFGGYKQSGNGREWGRYGLEE 457 (466)
T ss_pred EEEeccCCHHHHHHHHhCCCCCceEEEEcCCHHHHHHHHHhcCcceEEECCCC-CCCCCCcCCcccccCCccchHHHHHH
Confidence 99999999999999999999999999999999999999999999999999864 56789999999999999999999999
Q ss_pred hheeeEEE
Q 015042 398 YLQIKSVV 405 (414)
Q Consensus 398 ~~~~k~i~ 405 (414)
||++|+|+
T Consensus 458 ~~~~k~v~ 465 (466)
T cd07138 458 FLEVKSIQ 465 (466)
T ss_pred hcceeEEe
Confidence 99999875
|
The 6-oxolauric acid dehydrogenase (CddD) from Rhodococcus ruber SC1 which converts 6-oxolauric acid to dodecanedioic acid, and the aldehyde dehydrogenase (locus SSP0762) from Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 and other similar sequences, are included in this CD. |
| >cd07094 ALDH_F21_LactADH-like ALDH subfamily: NAD+-dependent, lactaldehyde dehydrogenase, ALDH family 21 A1, and related proteins | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-85 Score=664.62 Aligned_cols=398 Identities=38% Similarity=0.653 Sum_probs=375.4
Q ss_pred CHHHHHHHHHhHHHHHHHHHHhcCCChHHHhhchHHHHHHHHHHHHHhhhhhcCcccccC-----CCcccceeecCCceE
Q 015042 1 MWKFADLIEEHVEELAALDALDAGKVYLRAKTAEIPGAAEFLRFFAGAADKIHGEVLKMS-----SELQGYTLREPVGVV 75 (414)
Q Consensus 1 L~~~a~~l~~~~~~l~~~~~~etGk~~~e~~~~ei~~~~~~l~~~a~~~~~~~~~~~~~~-----~~~~~~~~~~P~Gvv 75 (414)
|+++++.|++++++|++++++|+|||..++. .|+..+++.+++++...++..++..+.. .+...+.+++|+|||
T Consensus 49 L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~-~ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv 127 (453)
T cd07094 49 LERAADLLKKRAEEFAKIIACEGGKPIKDAR-VEVDRAIDTLRLAAEEAERIRGEEIPLDATQGSDNRLAWTIREPVGVV 127 (453)
T ss_pred HHHHHHHHHHhHHHHHHHHHHHcCCCHHHHH-HHHHHHHHHHHHHHHHHHHhcCccccccccccCCCceEEEEEeccceE
Confidence 5789999999999999999999999999865 5999999999999988877655443322 234567889999999
Q ss_pred EEEcCCccchHHHHHhHHHHHhhCCeEEeecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhhHHHhhhCCCccEEE
Q 015042 76 GHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLTALYYAHLAKLAGIPDGVLNVVPGFGPTAGAAICSHMDIDYVC 155 (414)
Q Consensus 76 ~~i~p~n~P~~~~~~~~~~aLaaGN~vv~kps~~~~~~~~~l~~~l~~aG~p~g~v~~v~~~~~~~~~~l~~~~~v~~v~ 155 (414)
++|+|||||+...++++++||++||+||+|||+.+|.++..+++++.++|+|+|+++++++++.++++.|+.||++|.|.
T Consensus 128 ~~I~p~N~P~~~~~~~~~~AL~aGN~VI~Kps~~~p~~~~~l~~~l~~ag~P~g~~~~v~g~~~~~~~~l~~~~~v~~V~ 207 (453)
T cd07094 128 LAITPFNFPLNLVAHKLAPAIATGCPVVLKPASKTPLSALELAKILVEAGVPEGVLQVVTGEREVLGDAFAADERVAMLS 207 (453)
T ss_pred EEECCCccHHHHHHHHHHHHHHcCCEEEEECCCcchHHHHHHHHHHHHcCCCcCcEEEEeCCCchHHHHHhcCCCCCEEE
Confidence 99999999999999999999999999999999999999999999999999999999999997777899999999999999
Q ss_pred EeCCcHHHHHHHHHHHhcccceeEEEcCCCCCceEcCCCCHHHHHHHHHHHhhccCCCCcccCceEEEeCchHHHHHHHH
Q 015042 156 FTGSTDVGRLVMQAAAASNLKQVSLELGGKSPLLIFDDADLDTAADVALLGNLYNKGEICVASSRVFVQEGIYDKFEKKL 235 (414)
Q Consensus 156 ~tGs~~~g~~i~~~~a~~~~~~~~~e~gg~~~~iV~~dadl~~aa~~i~~~~~~~~Gq~C~a~~~i~V~~~i~d~f~~~l 235 (414)
||||..+|+.|.+.+ .++|+++|+|||||+||++|||++.|++.+++++|.++||.|+++++||||++++|+|+++|
T Consensus 208 fTGs~~~g~~v~~~a---~~~~~~lelGGk~~~iV~~dadl~~aa~~i~~~~~~~~GQ~C~a~~~i~V~~~i~d~f~~~L 284 (453)
T cd07094 208 FTGSAAVGEALRANA---GGKRIALELGGNAPVIVDRDADLDAAIEALAKGGFYHAGQVCISVQRIYVHEELYDEFIEAF 284 (453)
T ss_pred EECcHHHHHHHHHHc---CCCceEEecCCCCceEECCCCCHHHHHHHHHHHHHHhcCCCCcCCeEEEEeHHHHHHHHHHH
Confidence 999999999999876 47899999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhhcccCCCCCCCCcccccCCHHHHHHHHHHHHHHHHcCCEEEeCCcccCCCCceeeeEEEeeCCCcccccccceec
Q 015042 236 LEKAKAWLVGDPFDPTVRQGPQISERHFDRILSYIEHGKREGATLLTGGKPIGDKGYYIEPTIFTNVKEDMIIAKEEIFG 315 (414)
Q Consensus 236 ~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fg 315 (414)
+++++++++|+|.++++.+||+++..+++++++++++++++|+++++||.. .|+|++|||+.+++++|.++++|+||
T Consensus 285 ~~~~~~~~~g~p~~~~~~~gpli~~~~~~~~~~~i~~a~~~Ga~v~~gg~~---~g~~~~Ptvl~~~~~~~~i~~~E~Fg 361 (453)
T cd07094 285 VAAVKKLKVGDPLDEDTDVGPLISEEAAERVERWVEEAVEAGARLLCGGER---DGALFKPTVLEDVPRDTKLSTEETFG 361 (453)
T ss_pred HHHHHhccCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCEEEeCccC---CCeEEeCEEEeCCCCCChhhhCCCcC
Confidence 999999999999999999999999999999999999999999999999865 58899999999999999999999999
Q ss_pred ceEEEEeeCCHHHHHHHhhcCCCCceEEEecCCHHHHHHHHHhcceeEEEEcCcCCC-CCCCCcccCCCCCCCccchHHH
Q 015042 316 PVMALMKFKTVEEAIKSANNTQYGLAAGIVTKDLNVANTVSRSIRAGIIWINCYFGF-SMDCPYGGYKMSGFGREYGLES 394 (414)
Q Consensus 316 Pvl~v~~~~~~~eai~~~n~~~~gl~~sv~s~d~~~~~~~~~~l~~g~v~iN~~~~~-~~~~p~gG~~~sG~g~~~g~~~ 394 (414)
||++|++|+|++||++++|+++|||++||||+|.++++++++++++|+|+||++... .+.+||||+|+||+|+++|++|
T Consensus 362 Pvl~v~~~~~~~eai~~~n~~~~gL~~~i~t~d~~~a~~~~~~l~~g~v~iN~~~~~~~~~~pfgG~~~SG~G~~~g~~~ 441 (453)
T cd07094 362 PVVPIIRYDDFEEAIRIANSTDYGLQAGIFTRDLNVAFKAAEKLEVGGVMVNDSSAFRTDWMPFGGVKESGVGREGVPYA 441 (453)
T ss_pred ceEEEEEeCCHHHHHHHHhCCCCCCeeEEECCCHHHHHHHHHhcCcCeEEEcCCCCCCCCCCCCCCccccccCcCChHHH
Confidence 999999999999999999999999999999999999999999999999999998654 4689999999999999999999
Q ss_pred HHhhheeeEEE
Q 015042 395 LYKYLQIKSVV 405 (414)
Q Consensus 395 ~~~~~~~k~i~ 405 (414)
+++|+++|+|+
T Consensus 442 ~~~~~~~k~i~ 452 (453)
T cd07094 442 MEEMTEEKTVV 452 (453)
T ss_pred HHHHhceeEEe
Confidence 99999999985
|
ALDH subfamily which includes Tortula ruralis aldehyde dehydrogenase ALDH21A1 (RNP123), and NAD+-dependent, lactaldehyde dehydrogenase (EC=1.2.1.22) and like sequences. |
| >cd07102 ALDH_EDX86601 Uncharacterized aldehyde dehydrogenase of Synechococcus sp | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.6e-85 Score=664.03 Aligned_cols=402 Identities=34% Similarity=0.532 Sum_probs=379.0
Q ss_pred CHHHHHHHHHhHHHHHHHHHHhcCCChHHHhhchHHHHHHHHHHHHHhhhhhcCcc-cccCCCcccceeecCCceEEEEc
Q 015042 1 MWKFADLIEEHVEELAALDALDAGKVYLRAKTAEIPGAAEFLRFFAGAADKIHGEV-LKMSSELQGYTLREPVGVVGHII 79 (414)
Q Consensus 1 L~~~a~~l~~~~~~l~~~~~~etGk~~~e~~~~ei~~~~~~l~~~a~~~~~~~~~~-~~~~~~~~~~~~~~P~Gvv~~i~ 79 (414)
|+++++.|++++++|++++++|+|||..++ ..|+..+++.+++++..+++..+.. .+...+...+.+++|+|||++|+
T Consensus 46 L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~~-~~ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~ 124 (452)
T cd07102 46 VTRAVELLAANTDEIAEELTWQMGRPIAQA-GGEIRGMLERARYMISIAEEALADIRVPEKDGFERYIRREPLGVVLIIA 124 (452)
T ss_pred HHHHHHHHHHCHHHHHHHHHHHhCCCHHHH-HHHHHHHHHHHHHHHHHHHHhcCCcccCCCCCeeEEEEEEeccEEEEEc
Confidence 578999999999999999999999999976 5699999999999998877654432 22234555788999999999999
Q ss_pred CCccchHHHHHhHHHHHhhCCeEEeecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhhHHHhhhCCCccEEEEeCC
Q 015042 80 PWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLTALYYAHLAKLAGIPDGVLNVVPGFGPTAGAAICSHMDIDYVCFTGS 159 (414)
Q Consensus 80 p~n~P~~~~~~~~~~aLaaGN~vv~kps~~~~~~~~~l~~~l~~aG~p~g~v~~v~~~~~~~~~~l~~~~~v~~v~~tGs 159 (414)
|||||+...++++++||++||+||+|||+.+|.++..+.++|.++|+|+|+++++++++ +.++.|+.||++|.|.||||
T Consensus 125 p~N~P~~~~~~~l~~ALaaGN~VVlKps~~~~~~~~~l~~~l~~aGlP~g~~~~v~g~~-~~~~~L~~~~~v~~V~fTGs 203 (452)
T cd07102 125 PWNYPYLTAVNAVIPALLAGNAVILKHSPQTPLCGERFAAAFAEAGLPEGVFQVLHLSH-ETSAALIADPRIDHVSFTGS 203 (452)
T ss_pred CCchHHHHHHHHHHHHHHcCCEEEEECCCCCcHHHHHHHHHHHhcCCCcCcEEEEeCCc-hhHHHHhcCCCCCEEEEECc
Confidence 99999999999999999999999999999999999999999999999999999999966 78999999999999999999
Q ss_pred cHHHHHHHHHHHhcccceeEEEcCCCCCceEcCCCCHHHHHHHHHHHhhccCCCCcccCceEEEeCchHHHHHHHHHHHH
Q 015042 160 TDVGRLVMQAAAASNLKQVSLELGGKSPLLIFDDADLDTAADVALLGNLYNKGEICVASSRVFVQEGIYDKFEKKLLEKA 239 (414)
Q Consensus 160 ~~~g~~i~~~~a~~~~~~~~~e~gg~~~~iV~~dadl~~aa~~i~~~~~~~~Gq~C~a~~~i~V~~~i~d~f~~~l~~~~ 239 (414)
+.+|+.|.+.++ +.++|+++|+|||||+||++|||++.|++.+++++|+++||.|+++++||||++++|+|+++|++.+
T Consensus 204 ~~~g~~v~~~a~-~~~~~v~lelgG~~~~iV~~dADl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~v~~~f~~~L~~~~ 282 (452)
T cd07102 204 VAGGRAIQRAAA-GRFIKVGLELGGKDPAYVRPDADLDAAAESLVDGAFFNSGQSCCSIERIYVHESIYDAFVEAFVAVV 282 (452)
T ss_pred HHHHHHHHHHHH-hcCCcEEEECCCCCceEEcCCCCHHHHHHHHHHHHHHhCCCCCcCCcEEEEeHHHHHHHHHHHHHHH
Confidence 999999999887 8899999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhcccCCCCCCCCcccccCCHHHHHHHHHHHHHHHHcCCEEEeCCccc---CCCCceeeeEEEeeCCCcccccccceecc
Q 015042 240 KAWLVGDPFDPTVRQGPQISERHFDRILSYIEHGKREGATLLTGGKPI---GDKGYYIEPTIFTNVKEDMIIAKEEIFGP 316 (414)
Q Consensus 240 ~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ga~v~~gg~~~---~~~g~~~~Ptvl~~~~~~~~~~~~E~fgP 316 (414)
+++++|+|.++++++||+++..+++++++++++++.+|+++++||... ...|+|+.|||+.+++++|.++++|+|||
T Consensus 283 ~~l~vg~p~~~~~~~gpli~~~~~~~i~~~i~~a~~~ga~vl~gg~~~~~~~~~g~~~~Ptvl~~~~~~~~i~~~E~fgP 362 (452)
T cd07102 283 KGYKLGDPLDPSTTLGPVVSARAADFVRAQIADAIAKGARALIDGALFPEDKAGGAYLAPTVLTNVDHSMRVMREETFGP 362 (452)
T ss_pred HhccCCCCCCCCCCCCCCcCHHHHHHHHHHHHHHHhCCCEEEeCCCCCCCCCCCCceEcCEEEecCCCCChhhhcCCcCC
Confidence 999999999999999999999999999999999999999999998753 23689999999999999999999999999
Q ss_pred eEEEEeeCCHHHHHHHhhcCCCCceEEEecCCHHHHHHHHHhcceeEEEEcCcCCCCCCCCcccCCCCCCCccchHHHHH
Q 015042 317 VMALMKFKTVEEAIKSANNTQYGLAAGIVTKDLNVANTVSRSIRAGIIWINCYFGFSMDCPYGGYKMSGFGREYGLESLY 396 (414)
Q Consensus 317 vl~v~~~~~~~eai~~~n~~~~gl~~sv~s~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~p~gG~~~sG~g~~~g~~~~~ 396 (414)
|++|++|+|++|||+++|+++|||++||||+|.+.++++++++++|+|+||++....+.+||||+|+||+|+++|++|++
T Consensus 363 vl~v~~~~~~~eai~~~n~~~~gL~~~i~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~pfgG~k~SG~G~~~g~~~~~ 442 (452)
T cd07102 363 VVGIMKVKSDAEAIALMNDSEYGLTASVWTKDIARAEALGEQLETGTVFMNRCDYLDPALAWTGVKDSGRGVTLSRLGYD 442 (452)
T ss_pred eEEEEEeCCHHHHHHHHhCCCCCceEEEEcCCHHHHHHHHHHcCcceEEECCCCCCCCCCCCCCccccccCccchHHHHH
Confidence 99999999999999999999999999999999999999999999999999998777778999999999999999999999
Q ss_pred hhheeeEEE
Q 015042 397 KYLQIKSVV 405 (414)
Q Consensus 397 ~~~~~k~i~ 405 (414)
+||++|+++
T Consensus 443 ~~~~~k~~~ 451 (452)
T cd07102 443 QLTRPKSYH 451 (452)
T ss_pred HHhceeEEe
Confidence 999999985
|
PCC 7335 (EDX86601). Uncharacterized aldehyde dehydrogenase of Synechococcus sp. PCC 7335 (locus EDX86601) and other similar sequences, are present in this CD. |
| >cd07092 ALDH_ABALDH-YdcW Escherichia coli NAD+-dependent gamma-aminobutyraldehyde dehydrogenase YdcW-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.1e-85 Score=663.12 Aligned_cols=402 Identities=42% Similarity=0.709 Sum_probs=377.8
Q ss_pred CHHHHHHHHHhHHHHHHHHHHhcCCChHHHhhchHHHHHHHHHHHHHhhhhhcCccccc-CCCcccceeecCCceEEEEc
Q 015042 1 MWKFADLIEEHVEELAALDALDAGKVYLRAKTAEIPGAAEFLRFFAGAADKIHGEVLKM-SSELQGYTLREPVGVVGHII 79 (414)
Q Consensus 1 L~~~a~~l~~~~~~l~~~~~~etGk~~~e~~~~ei~~~~~~l~~~a~~~~~~~~~~~~~-~~~~~~~~~~~P~Gvv~~i~ 79 (414)
|+++++.|.+++++|++++++|+|||..+....|+..+++.+++++...+.+.+..... ..+...+.+++|+|||++|+
T Consensus 47 L~~~~~~l~~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~I~ 126 (450)
T cd07092 47 LLKLADAIEENAEELAALESRNTGKPLHLVRDDELPGAVDNFRFFAGAARTLEGPAAGEYLPGHTSMIRREPIGVVAQIA 126 (450)
T ss_pred HHHHHHHHHHhHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHHHHHHHHHhcCcccCccCCCceeEEEEeccceEEEEC
Confidence 57899999999999999999999999976656699999999999998776654432211 12345678999999999999
Q ss_pred CCccchHHHHHhHHHHHhhCCeEEeecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhhHHHhhhCCCccEEEEeCC
Q 015042 80 PWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLTALYYAHLAKLAGIPDGVLNVVPGFGPTAGAAICSHMDIDYVCFTGS 159 (414)
Q Consensus 80 p~n~P~~~~~~~~~~aLaaGN~vv~kps~~~~~~~~~l~~~l~~aG~p~g~v~~v~~~~~~~~~~l~~~~~v~~v~~tGs 159 (414)
|||||++..++++++||++||+||+|||+.+|.++..+.++|.+ |+|+|+++++++++.+.++.|+.|+++|.|.||||
T Consensus 127 P~N~P~~~~~~~~~~AL~aGN~VIlKps~~~~~~~~~l~~~~~~-glP~g~~~~v~g~~~~~~~~l~~~~~v~~V~fTGs 205 (450)
T cd07092 127 PWNYPLMMAAWKIAPALAAGNTVVLKPSETTPLTTLLLAELAAE-VLPPGVVNVVCGGGASAGDALVAHPRVRMVSLTGS 205 (450)
T ss_pred CCCcHHHHHHHHHHHHHHcCCEEEEECCccchHHHHHHHHHHHh-cCCcccEEEeecCchHHHHHHhcCCCCCEEEEECc
Confidence 99999999999999999999999999999999999999999999 99999999999877678899999999999999999
Q ss_pred cHHHHHHHHHHHhcccceeEEEcCCCCCceEcCCCCHHHHHHHHHHHhhccCCCCcccCceEEEeCchHHHHHHHHHHHH
Q 015042 160 TDVGRLVMQAAAASNLKQVSLELGGKSPLLIFDDADLDTAADVALLGNLYNKGEICVASSRVFVQEGIYDKFEKKLLEKA 239 (414)
Q Consensus 160 ~~~g~~i~~~~a~~~~~~~~~e~gg~~~~iV~~dadl~~aa~~i~~~~~~~~Gq~C~a~~~i~V~~~i~d~f~~~l~~~~ 239 (414)
+.+|+.|++.++ ++++|+++|+|||||+||++|||++.|++.+++++|.|+||.|+++++||||++++|+|+++|++++
T Consensus 206 ~~~g~~v~~~a~-~~~~~~~lelgG~~p~iV~~dAdl~~aa~~iv~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~l~~~~ 284 (450)
T cd07092 206 VRTGKKVARAAA-DTLKRVHLELGGKAPVIVFDDADLDAAVAGIATAGYYNAGQDCTAACRVYVHESVYDEFVAALVEAV 284 (450)
T ss_pred HHHHHHHHHHHh-hcCCcEEEECCCCCeeEECCCCCHHHHHHHHHHHHHhhCCCCCCCCcEEEEeHHHHHHHHHHHHHHH
Confidence 999999999988 8899999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhcccCCCCCCCCcccccCCHHHHHHHHHHHHHHHHcCCEEEeCCcccCCCCceeeeEEEeeCCCcccccccceecceEE
Q 015042 240 KAWLVGDPFDPTVRQGPQISERHFDRILSYIEHGKREGATLLTGGKPIGDKGYYIEPTIFTNVKEDMIIAKEEIFGPVMA 319 (414)
Q Consensus 240 ~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~ 319 (414)
+++++|+|.++++++||++++.++++++++++++. +|+++++||......|+|++|||+.+++++|.+++||+||||++
T Consensus 285 ~~~~~g~p~~~~~~~gpli~~~~~~~i~~~i~~a~-~ga~~~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~ 363 (450)
T cd07092 285 SAIRVGDPDDEDTEMGPLNSAAQRERVAGFVERAP-AHARVLTGGRRAEGPGYFYEPTVVAGVAQDDEIVQEEIFGPVVT 363 (450)
T ss_pred hhCCcCCCCCCCCccCcccCHHHHHHHHHHHHHHH-cCCEEEeCCCCCCCCccEEeeEEEEcCCCCChHHhCCCcCceEE
Confidence 99999999999999999999999999999999998 99999999986555789999999999999999999999999999
Q ss_pred EEeeCCHHHHHHHhhcCCCCceEEEecCCHHHHHHHHHhcceeEEEEcCcCCCCCCCCcccCCCCCCCccchHHHHHhhh
Q 015042 320 LMKFKTVEEAIKSANNTQYGLAAGIVTKDLNVANTVSRSIRAGIIWINCYFGFSMDCPYGGYKMSGFGREYGLESLYKYL 399 (414)
Q Consensus 320 v~~~~~~~eai~~~n~~~~gl~~sv~s~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~p~gG~~~sG~g~~~g~~~~~~~~ 399 (414)
|++|+|+||||+++|+++|||++||||+|.+.++++++++++|.|+||++....+.+||||+|.||+|+++|++++++||
T Consensus 364 v~~~~~~deai~~~n~~~~gL~~~vft~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~PfgG~~~SG~G~~~g~~~~~~~~ 443 (450)
T cd07092 364 VQPFDDEDEAIELANDVEYGLASSVWTRDVGRAMRLSARLDFGTVWVNTHIPLAAEMPHGGFKQSGYGKDLSIYALEDYT 443 (450)
T ss_pred EEEECCHHHHHHHHhCCCCCceEEEECCCHHHHHHHHHhcCccEEEECCCCCCCCCCCcCCcccCcCCCCChHHHHHHHh
Confidence 99999999999999999999999999999999999999999999999998877788999999999999999999999999
Q ss_pred eeeEEE
Q 015042 400 QIKSVV 405 (414)
Q Consensus 400 ~~k~i~ 405 (414)
+.|+|+
T Consensus 444 ~~k~~~ 449 (450)
T cd07092 444 RIKHVM 449 (450)
T ss_pred eeeEEe
Confidence 999985
|
NAD+-dependent, tetrameric, gamma-aminobutyraldehyde dehydrogenase (ABALDH), YdcW of Escherichia coli K12, catalyzes the oxidation of gamma-aminobutyraldehyde to gamma-aminobutyric acid. ABALDH can also oxidize n-alkyl medium-chain aldehydes, but with a lower catalytic efficiency. |
| >PF00171 Aldedh: Aldehyde dehydrogenase family; InterPro: IPR015590 Aldehyde dehydrogenases (1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-86 Score=673.57 Aligned_cols=402 Identities=47% Similarity=0.777 Sum_probs=379.1
Q ss_pred CHHHHHHHHHhHHHHHHHHHHhcCCChHHHhhchHHHHHHHHHHHHHhhhhhcCcccccCCCcccceeecCCceEEEEcC
Q 015042 1 MWKFADLIEEHVEELAALDALDAGKVYLRAKTAEIPGAAEFLRFFAGAADKIHGEVLKMSSELQGYTLREPVGVVGHIIP 80 (414)
Q Consensus 1 L~~~a~~l~~~~~~l~~~~~~etGk~~~e~~~~ei~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p 80 (414)
|+++++.|++|+++|++++++|+|||..++.. |+..+++.+++++++++++.++.++.+.+...+.+++|+|||++|+|
T Consensus 57 L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~-ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p 135 (462)
T PF00171_consen 57 LERFADLLEERRDELAELIALETGKPIAEARG-EVDRAIDFLRYYADAARKLAGEVLPSDPGSRNYTRREPLGVVLIITP 135 (462)
T ss_dssp HHHHHHHHHHTHHHHHHHHHHHHTSSHHHHHH-HHHHHHHHHHHHHHHHHHHTEEEEEESTTEEEEEEEEE-SEEEEEE-
T ss_pred HHHHHHHHhhcccccccccccccccccccccc-hhhhhhhhhhhhhhcccceehhhcccccccccccccccccceeeccc
Confidence 57899999999999999999999999998765 99999999999999998876666555567889999999999999999
Q ss_pred CccchHHHHHhHHHHHhhCCeEEeecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhhHHHhhhCCCccEEEEeCCc
Q 015042 81 WNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLTALYYAHLAKLAGIPDGVLNVVPGFGPTAGAAICSHMDIDYVCFTGST 160 (414)
Q Consensus 81 ~n~P~~~~~~~~~~aLaaGN~vv~kps~~~~~~~~~l~~~l~~aG~p~g~v~~v~~~~~~~~~~l~~~~~v~~v~~tGs~ 160 (414)
||||+..+++++++||++||+||+|||+.+|.++..+.+++.++|+|+|+++++++++.+.++.|+.||+++.|.||||.
T Consensus 136 ~n~P~~~~~~~~~~ALaaGN~VVlkps~~~~~~~~~l~~~~~~AglP~gvv~vv~g~~~~~~~~l~~~~~v~~v~ftGs~ 215 (462)
T PF00171_consen 136 WNFPLYLAVWKIAPALAAGNTVVLKPSEQAPLTALLLAELLEEAGLPPGVVNVVPGDGSEVGEALVSHPDVDLVSFTGST 215 (462)
T ss_dssp SSSCTHHHHHHHHHHHHTT-EEEEEEBTTSHHHHHHHHHHHHHHTSTTTSEEEECSSTHHHHHHHHHTTTEEEEEEESEH
T ss_pred ccccccccccchhhhhcccccceeeeccccccccccchhhccccccccccccccccccccccceeeeccccceeeecchh
Confidence 99999999999999999999999999999999999999999999999999999999888999999999999999999999
Q ss_pred HHHHHHHHHHHhcccceeEEEcCCCCCceEcCCCCHHHHHHHHHHHhhccCCCCcccCceEEEeCchHHHHHHHHHHHHh
Q 015042 161 DVGRLVMQAAAASNLKQVSLELGGKSPLLIFDDADLDTAADVALLGNLYNKGEICVASSRVFVQEGIYDKFEKKLLEKAK 240 (414)
Q Consensus 161 ~~g~~i~~~~a~~~~~~~~~e~gg~~~~iV~~dadl~~aa~~i~~~~~~~~Gq~C~a~~~i~V~~~i~d~f~~~l~~~~~ 240 (414)
.+|+.|.+.++ ++++|+++|+|||||+||++|||++.|++.+++++|+|+||.|+++++||||++++|+|+++|+++++
T Consensus 216 ~~g~~i~~~a~-~~~~~v~lelgG~~p~iV~~daDld~aa~~iv~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~l~~~~~ 294 (462)
T PF00171_consen 216 ATGRAIAKAAA-KNLKPVVLELGGKNPVIVDPDADLDKAAEAIVRGAFFNSGQSCTAPSRVLVHESIYDEFVEALKERVA 294 (462)
T ss_dssp HHHHHHHHHHH-TTTSEEEEEECEEEEEEE-TTSHHHHHHHHHHHHHHGGGGTSTTSEEEEEEEHHHHHHHHHHHHHHHH
T ss_pred hhhhhhhhhcc-cccccccccccccceeeEecccccccccccccchhcccccccccccccccccccccchhhhhhhhccc
Confidence 99999999988 88999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hcccCCCCCCCCcccccCCHHHHHHHHHHHHHHHHcCCEEEeCC---cccCCCCceeeeEEEeeCCCcccccccceecce
Q 015042 241 AWLVGDPFDPTVRQGPQISERHFDRILSYIEHGKREGATLLTGG---KPIGDKGYYIEPTIFTNVKEDMIIAKEEIFGPV 317 (414)
Q Consensus 241 ~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ga~v~~gg---~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPv 317 (414)
++++|+|.++++++||+++..+++++.+++++++.+|+++++|| ......|+|++|||+.+++++|.++++|+||||
T Consensus 295 ~l~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPv 374 (462)
T PF00171_consen 295 KLRVGDPLDESTDVGPLISKAQRERVKALIEDAVAEGAKVLCGGEPQEADPENGFFIPPTVLEDVPPDMPIMQEEIFGPV 374 (462)
T ss_dssp TSEBSSTTSTTCSBCHCSSHHHHHHHHHHHHHHHHTTSEEEEETSSSSBCSSSSTEEEEEEEESEHTTSHHHHSC-SSSE
T ss_pred cccccCCccccccccccccchhhhhccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 99999999999999999999999999999999999999999999 334468999999999999999999999999999
Q ss_pred EEEEeeCCHHHHHHHhhcCCCCceEEEecCCHHHHHHHHHhcceeEEEEcCcCCCCCC-CCcccCCCCCCCccchHHHHH
Q 015042 318 MALMKFKTVEEAIKSANNTQYGLAAGIVTKDLNVANTVSRSIRAGIIWINCYFGFSMD-CPYGGYKMSGFGREYGLESLY 396 (414)
Q Consensus 318 l~v~~~~~~~eai~~~n~~~~gl~~sv~s~d~~~~~~~~~~l~~g~v~iN~~~~~~~~-~p~gG~~~sG~g~~~g~~~~~ 396 (414)
++|++|+|++||++++|+++|||++||||+|.+.++++++++++|+|+||+++..... +||||+|.||+|+++|.+|++
T Consensus 375 l~v~~~~~~~eai~~~n~~~~gl~a~v~s~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~~pfgG~~~SG~G~~~g~~~l~ 454 (462)
T PF00171_consen 375 LPVVPYDDLDEAIALANDSEYGLTASVFSRDESRAERLARRLEAGRVWINDPPTGDPDGLPFGGFKQSGIGREGGPEGLD 454 (462)
T ss_dssp EEEEEESSHHHHHHHHHHSSEESEEEEECSBHHHHHHHHHHSTSSEEEESSSSTGGTTSSEBE-SGGGEESEBSHHHHHH
T ss_pred ceecccccchhhhhcccccCCCceeEEecccccccccccccccccceeecCCcccccccCCCCCcccccCCcchHHHHHH
Confidence 9999999999999999999999999999999999999999999999999999875544 699999999999999999999
Q ss_pred hhheeeEE
Q 015042 397 KYLQIKSV 404 (414)
Q Consensus 397 ~~~~~k~i 404 (414)
+||+.|+|
T Consensus 455 ~~~~~k~V 462 (462)
T PF00171_consen 455 EFTQIKTV 462 (462)
T ss_dssp GTEEEEEE
T ss_pred HhCCccCC
Confidence 99999986
|
2.1.3 from EC and 1.2.1.5 from EC) are enzymes that oxidize a wide variety of aliphatic and aromatic aldehydes using NADP as a cofactor. In mammals at least four different forms of the enzyme are known []: class-1 (or Ald C) a tetrameric cytosolic enzyme, class-2 (or Ald M) a tetrameric mitochondrial enzyme, class- 3 (or Ald D) a dimeric cytosolic enzyme, and class IV a microsomal enzyme. Aldehyde dehydrogenases have also been sequenced from fungal and bacterial species. A number of enzymes are known to be evolutionary related to aldehyde dehydrogenases. A glutamic acid and a cysteine residue have been implicated in the catalytic activity of mammalian aldehyde dehydrogenase. These residues are conserved in all the enzymes of this entry. Some of the proteins in this entry are allergens. Allergies are hypersensitivity reactions of the immune system to specific substances called allergens (such as pollen, stings, drugs, or food) that, in most people, result in no symptoms. A nomenclature system has been established for antigens (allergens) that cause IgE-mediated atopic allergies in humans [WHO/IUIS Allergen Nomenclature Subcommittee King T.P., Hoffmann D., Loewenstein H., Marsh D.G., Platts-Mills T.A.E., Thomas W. Bull. World Health Organ. 72:797-806(1994)]. This nomenclature system is defined by a designation that is composed of the first three letters of the genus; a space; the first letter of the species name; a space and an arabic number. In the event that two species names have identical designations, they are discriminated from one another by adding one or more letters (as necessary) to each species designation. The allergens in this family include allergens with the following designations: Alt a 10 and Cla h 3.; GO: 0016491 oxidoreductase activity, 0008152 metabolic process, 0055114 oxidation-reduction process; PDB: 3R31_A 3HAZ_A 1UXQ_A 1UXP_A 1UXR_A 1UXU_A 1UXN_A 1KY8_A 1UXT_A 1UXV_A .... |
| >PRK09457 astD succinylglutamic semialdehyde dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.2e-85 Score=665.71 Aligned_cols=404 Identities=31% Similarity=0.440 Sum_probs=372.1
Q ss_pred CHHHHHHHHHhHHHHHHHHHHhcCCChHHHhhchHHHHHHHHHHHHHhhhhhcCcccccCCCcccceeecCCceEEEEcC
Q 015042 1 MWKFADLIEEHVEELAALDALDAGKVYLRAKTAEIPGAAEFLRFFAGAADKIHGEVLKMSSELQGYTLREPVGVVGHIIP 80 (414)
Q Consensus 1 L~~~a~~l~~~~~~l~~~~~~etGk~~~e~~~~ei~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p 80 (414)
|+++++.|++++++|++++++|+|||..++. .|+..+++.+++++.+..+..+.......+...+.+++|+|||++|+|
T Consensus 65 L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a~-~ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~P 143 (487)
T PRK09457 65 VERFAALLEENKEELAEVIARETGKPLWEAA-TEVTAMINKIAISIQAYHERTGEKRSEMADGAAVLRHRPHGVVAVFGP 143 (487)
T ss_pred HHHHHHHHHhHHHHHHHHHHHHhCCCHHHHH-HHHHHHHHHHHHHHHHHHHhcCceeccCCCceeEEEEeccEEEEEECC
Confidence 5789999999999999999999999999865 699999999999887765554443322234456889999999999999
Q ss_pred CccchHHHHHhHHHHHhhCCeEEeecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhhHHHhhhCCCccEEEEeCCc
Q 015042 81 WNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLTALYYAHLAKLAGIPDGVLNVVPGFGPTAGAAICSHMDIDYVCFTGST 160 (414)
Q Consensus 81 ~n~P~~~~~~~~~~aLaaGN~vv~kps~~~~~~~~~l~~~l~~aG~p~g~v~~v~~~~~~~~~~l~~~~~v~~v~~tGs~ 160 (414)
||||+..+++++++||++||+||+|||+.+|.++..+.+++.++|+|+|+++++++ +.+.++.|+.||++|.|.||||+
T Consensus 144 wN~P~~~~~~~~~~ALaaGN~VvlKPs~~tp~t~~~l~~l~~~aGlP~gvv~~v~g-~~~~~~~L~~~~~v~~V~fTGS~ 222 (487)
T PRK09457 144 YNFPGHLPNGHIVPALLAGNTVVFKPSELTPWVAELTVKLWQQAGLPAGVLNLVQG-GRETGKALAAHPDIDGLLFTGSA 222 (487)
T ss_pred CchHHHHHHHHHHHHHHcCCEEEEECCCCCcHHHHHHHHHHHHhCcCcCeEEEEeC-CHHHHHHHhcCCCcCEEEEECCH
Confidence 99999999999999999999999999999999999999999999999999999998 66789999999999999999999
Q ss_pred HHHHHHHHHHHhcccceeEEEcCCCCCceEcCCCCHHHHHHHHHHHhhccCCCCcccCceEEEeCchH-HHHHHHHHHHH
Q 015042 161 DVGRLVMQAAAASNLKQVSLELGGKSPLLIFDDADLDTAADVALLGNLYNKGEICVASSRVFVQEGIY-DKFEKKLLEKA 239 (414)
Q Consensus 161 ~~g~~i~~~~a~~~~~~~~~e~gg~~~~iV~~dadl~~aa~~i~~~~~~~~Gq~C~a~~~i~V~~~i~-d~f~~~l~~~~ 239 (414)
.+|+.|.+.++....+++++|+|||||+||++|||++.|++.+++++|.|+||.|+++++||||+++| |+|+++|++.+
T Consensus 223 ~~G~~i~~~aa~~~~~~~~lElGGk~p~IV~~dADl~~aa~~i~~~~f~~~GQ~C~a~~rv~V~~~i~~d~f~~~l~~~~ 302 (487)
T PRK09457 223 NTGYLLHRQFAGQPEKILALEMGGNNPLVIDEVADIDAAVHLIIQSAFISAGQRCTCARRLLVPQGAQGDAFLARLVAVA 302 (487)
T ss_pred HHHHHHHHHHhhcCCCcEEEecCCCCeEEECCCCCHHHHHHHHHHHHhhccCCCCCCCceEEEeccccHHHHHHHHHHHH
Confidence 99999999876345678999999999999999999999999999999999999999999999999998 99999999999
Q ss_pred hhcccCCCC-CCCCcccccCCHHHHHHHHHHHHHHHHcCCEEEeCCcccCCCCceeeeEEEeeCCCcccccccceecceE
Q 015042 240 KAWLVGDPF-DPTVRQGPQISERHFDRILSYIEHGKREGATLLTGGKPIGDKGYYIEPTIFTNVKEDMIIAKEEIFGPVM 318 (414)
Q Consensus 240 ~~~~~g~~~-~~~~~~gpl~~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl 318 (414)
+++++|+|. ++.+++||+++..+++++.+++++++++|+++++||...+++|+|++|||+ +++++|.+++||+||||+
T Consensus 303 ~~~~vG~p~~~~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~~~~gg~~~~~~g~~~~PTvl-~v~~~~~i~~eE~FGPVl 381 (487)
T PRK09457 303 KRLTVGRWDAEPQPFMGAVISEQAAQGLVAAQAQLLALGGKSLLEMTQLQAGTGLLTPGII-DVTGVAELPDEEYFGPLL 381 (487)
T ss_pred hcCcCCCCCcCCCCccCCCcCHHHHHHHHHHHHHHHHCCCEEEeCCCccCCCCeeEecEEe-ccCCCChHHhCCCcCCeE
Confidence 999999996 788999999999999999999999999999999988654456899999999 799999999999999999
Q ss_pred EEEeeCCHHHHHHHhhcCCCCceEEEecCCHHHHHHHHHhcceeEEEEcCcCC-CCCCCCcccCCCCCCCccchHHHHHh
Q 015042 319 ALMKFKTVEEAIKSANNTQYGLAAGIVTKDLNVANTVSRSIRAGIIWINCYFG-FSMDCPYGGYKMSGFGREYGLESLYK 397 (414)
Q Consensus 319 ~v~~~~~~~eai~~~n~~~~gl~~sv~s~d~~~~~~~~~~l~~g~v~iN~~~~-~~~~~p~gG~~~sG~g~~~g~~~~~~ 397 (414)
+|++|+|+||||+++|+++|||++||||+|.+.++++++++++|.|+||+... ..+.+||||+|.||+|+++|..+ .+
T Consensus 382 ~V~~~~~~deai~~~N~~~~gL~a~v~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~~PfGG~k~SG~G~~~g~~~-~~ 460 (487)
T PRK09457 382 QVVRYDDFDEAIRLANNTRFGLSAGLLSDDREDYDQFLLEIRAGIVNWNKPLTGASSAAPFGGVGASGNHRPSAYYA-AD 460 (487)
T ss_pred EEEEeCCHHHHHHHHhCCCCCceEEEEcCCHHHHHHHHHhCCcceEEEECCCCCCCCCCCCCCcccccCCCCCchhH-hh
Confidence 99999999999999999999999999999999999999999999999998755 34578999999999999999555 55
Q ss_pred hheeeEEEeeC
Q 015042 398 YLQIKSVVTPI 408 (414)
Q Consensus 398 ~~~~k~i~~~~ 408 (414)
||+.|+++...
T Consensus 461 ~~~~k~~~~~~ 471 (487)
T PRK09457 461 YCAYPMASLES 471 (487)
T ss_pred heeeeEEEEec
Confidence 99999998875
|
|
| >cd07095 ALDH_SGSD_AstD N-succinylglutamate 5-semialdehyde dehydrogenase, AstD-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.9e-85 Score=657.33 Aligned_cols=398 Identities=31% Similarity=0.453 Sum_probs=369.7
Q ss_pred CHHHHHHHHHhHHHHHHHHHHhcCCChHHHhhchHHHHHHHHHHHHHhhhhhcCcccccCCCcccceeecCCceEEEEcC
Q 015042 1 MWKFADLIEEHVEELAALDALDAGKVYLRAKTAEIPGAAEFLRFFAGAADKIHGEVLKMSSELQGYTLREPVGVVGHIIP 80 (414)
Q Consensus 1 L~~~a~~l~~~~~~l~~~~~~etGk~~~e~~~~ei~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p 80 (414)
|+++++.|++|+++|++++++|+|||..++ ..|+..+++.+++++....+..+.......+...+++++|+|||++|+|
T Consensus 28 L~~~a~~l~~~~~~la~~~~~e~Gk~~~ea-~~ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~P 106 (431)
T cd07095 28 LRRFAELLKANKEELARLISRETGKPLWEA-QTEVAAMAGKIDISIKAYHERTGERATPMAQGRAVLRHRPHGVMAVFGP 106 (431)
T ss_pred HHHHHHHHHhHHHHHHHHHHHHcCCCHHHH-HHHHHHHHHHHHHHHHHHHHhcCCcccCCCCceEEEEEecceEEEEECC
Confidence 578999999999999999999999999986 4699999999999988776654443222235567889999999999999
Q ss_pred CccchHHHHHhHHHHHhhCCeEEeecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhhHHHhhhCCCccEEEEeCCc
Q 015042 81 WNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLTALYYAHLAKLAGIPDGVLNVVPGFGPTAGAAICSHMDIDYVCFTGST 160 (414)
Q Consensus 81 ~n~P~~~~~~~~~~aLaaGN~vv~kps~~~~~~~~~l~~~l~~aG~p~g~v~~v~~~~~~~~~~l~~~~~v~~v~~tGs~ 160 (414)
||||++..++++++||++||+||+|||+.+|.++..+.++|.++|+|+|+++++++ +.+.++.|+.|+++|.|.||||.
T Consensus 107 wN~P~~~~~~~~~~ALaaGN~VI~Kps~~~~~~~~~l~~~~~~ag~P~g~~~~v~g-~~~~~~~l~~~~~v~~v~ftGs~ 185 (431)
T cd07095 107 FNFPGHLPNGHIVPALLAGNTVVFKPSELTPAVAELMVELWEEAGLPPGVLNLVQG-GRETGEALAAHEGIDGLLFTGSA 185 (431)
T ss_pred CchHHHHHHHHHHHHHhcCCEEEeeCCCCCcHHHHHHHHHHHHhCcChhHheEEeC-cHHHHHHHhcCCCCCEEEEECcH
Confidence 99999999999999999999999999999999999999999999999999999998 55788999999999999999999
Q ss_pred HHHHHHHHHHHhcccceeEEEcCCCCCceEcCCCCHHHHHHHHHHHhhccCCCCcccCceEEEeCc-hHHHHHHHHHHHH
Q 015042 161 DVGRLVMQAAAASNLKQVSLELGGKSPLLIFDDADLDTAADVALLGNLYNKGEICVASSRVFVQEG-IYDKFEKKLLEKA 239 (414)
Q Consensus 161 ~~g~~i~~~~a~~~~~~~~~e~gg~~~~iV~~dadl~~aa~~i~~~~~~~~Gq~C~a~~~i~V~~~-i~d~f~~~l~~~~ 239 (414)
.+|+.|.+.++.+..+++++|+|||||+||++|||++.|++.+++++|.|+||.|+++++||||++ ++|+|+++|++++
T Consensus 186 ~~g~~i~~~~a~~~~~~~~lElgG~~~~iV~~daDl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~~i~d~f~~~l~~~~ 265 (431)
T cd07095 186 ATGLLLHRQFAGRPGKILALEMGGNNPLVVWDVADIDAAAYLIVQSAFLTAGQRCTCARRLIVPDGAVGDAFLERLVEAA 265 (431)
T ss_pred HHHHHHHHHhhccCCCcEEEECCCCCeEEECCCCCHHHHHHHHHHHHHHhCCCCCCCCeEEEEcCcchHHHHHHHHHHHH
Confidence 999999998763457899999999999999999999999999999999999999999999999999 9999999999999
Q ss_pred hhcccCCCCCCCCcccccCCHHHHHHHHHHHHHHHHcCCEEEeCCcccCCCCceeeeEEEeeCCCcccccccceecceEE
Q 015042 240 KAWLVGDPFDPTVRQGPQISERHFDRILSYIEHGKREGATLLTGGKPIGDKGYYIEPTIFTNVKEDMIIAKEEIFGPVMA 319 (414)
Q Consensus 240 ~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~ 319 (414)
+++++|+|.++++.+||+++..+++++.+++++++.+|+++++||...+++|+|++|||+ +++++|.+++||+||||++
T Consensus 266 ~~~~~G~p~~~~~~~gpli~~~~~~~i~~~v~~a~~~ga~~l~gg~~~~~~g~~~~Ptv~-~v~~~~~i~~eE~FgPvl~ 344 (431)
T cd07095 266 KRLRIGAPDAEPPFMGPLIIAAAAARYLLAQQDLLALGGEPLLAMERLVAGTAFLSPGII-DVTDAADVPDEEIFGPLLQ 344 (431)
T ss_pred HhCCCCCCCCCCCCcccccCHHHHHHHHHHHHHHHhcCCEEEeCCCcCCCCCeEEcCEEE-ecCCCChHHhCCCcCCeEE
Confidence 999999999999999999999999999999999999999999999765557999999999 6899999999999999999
Q ss_pred EEeeCCHHHHHHHhhcCCCCceEEEecCCHHHHHHHHHhcceeEEEEcCcCC-CCCCCCcccCCCCCCCccchHHHHHhh
Q 015042 320 LMKFKTVEEAIKSANNTQYGLAAGIVTKDLNVANTVSRSIRAGIIWINCYFG-FSMDCPYGGYKMSGFGREYGLESLYKY 398 (414)
Q Consensus 320 v~~~~~~~eai~~~n~~~~gl~~sv~s~d~~~~~~~~~~l~~g~v~iN~~~~-~~~~~p~gG~~~sG~g~~~g~~~~~~~ 398 (414)
|++|+|++||++++|+++|||++||||+|.+.++++++++++|.|+||++.. ..+.+||||+|.||+|+++|.+|++.|
T Consensus 345 v~~~~~~~eai~~~n~~~~gL~a~v~s~d~~~a~~~~~~l~~G~v~iN~~~~~~~~~~PfGG~k~SG~G~~~g~~~~~~~ 424 (431)
T cd07095 345 VYRYDDFDEAIALANATRFGLSAGLLSDDEALFERFLARIRAGIVNWNRPTTGASSTAPFGGVGLSGNHRPSAYYAADYC 424 (431)
T ss_pred EEeeCCHHHHHHHHhCCCCCCeEEEEcCCHHHHHHHHHhCCcceEEECCCCCCCCCCCCCCCcccccCCCCChHHHHHHH
Confidence 9999999999999999999999999999999999999999999999998765 345689999999999999999999955
Q ss_pred hee
Q 015042 399 LQI 401 (414)
Q Consensus 399 ~~~ 401 (414)
+++
T Consensus 425 ~~~ 427 (431)
T cd07095 425 AYP 427 (431)
T ss_pred hhh
Confidence 543
|
N-succinylglutamate 5-semialdehyde dehydrogenase or succinylglutamic semialdehyde dehydrogenase (SGSD, E. coli AstD, EC=1.2.1.71) involved in L-arginine degradation via the arginine succinyltransferase (AST) pathway and catalyzes the NAD+-dependent reduction of succinylglutamate semialdehyde into succinylglutamate. |
| >PRK09407 gabD2 succinic semialdehyde dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.6e-85 Score=668.77 Aligned_cols=404 Identities=38% Similarity=0.618 Sum_probs=376.2
Q ss_pred CHHHHHHHHHhHHHHHHHHHHhcCCChHHHhhchHHHHHHHHHHHHHhhhhhcCccc-cc--CCCcccceeecCCceEEE
Q 015042 1 MWKFADLIEEHVEELAALDALDAGKVYLRAKTAEIPGAAEFLRFFAGAADKIHGEVL-KM--SSELQGYTLREPVGVVGH 77 (414)
Q Consensus 1 L~~~a~~l~~~~~~l~~~~~~etGk~~~e~~~~ei~~~~~~l~~~a~~~~~~~~~~~-~~--~~~~~~~~~~~P~Gvv~~ 77 (414)
|+++++.|++++++|++++++|+|||..++ ..|+..+++.+++++..+++..+... .. ......+.+++|+|||++
T Consensus 82 L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a-~~ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVV~~ 160 (524)
T PRK09407 82 LLRFHDLVLENREELLDLVQLETGKARRHA-FEEVLDVALTARYYARRAPKLLAPRRRAGALPVLTKTTELRQPKGVVGV 160 (524)
T ss_pred HHHHHHHHHHhHHHHHHHHHHHcCCCHHHH-HHHHHHHHHHHHHHHHHHHHhhCCccccccCCCCceEEEEEecceEEEE
Confidence 578999999999999999999999999875 46999999999999988766544321 11 112457889999999999
Q ss_pred EcCCccchHHHHHhHHHHHhhCCeEEeecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhhHHHhhhCCCccEEEEe
Q 015042 78 IIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLTALYYAHLAKLAGIPDGVLNVVPGFGPTAGAAICSHMDIDYVCFT 157 (414)
Q Consensus 78 i~p~n~P~~~~~~~~~~aLaaGN~vv~kps~~~~~~~~~l~~~l~~aG~p~g~v~~v~~~~~~~~~~l~~~~~v~~v~~t 157 (414)
|+|||||++..++++++||++||+||+|||+.+|.++..+.+++.++|+|+|+++++++++.+.++.|+.| +|.|.||
T Consensus 161 I~P~N~Pl~~~~~~~~~ALaaGN~VIlKPs~~tp~~~~~l~~ll~eaGlP~gvv~~v~g~~~~~~~~L~~~--~d~V~fT 238 (524)
T PRK09407 161 ISPWNYPLTLAVSDAIPALLAGNAVVLKPDSQTPLTALAAVELLYEAGLPRDLWQVVTGPGPVVGTALVDN--ADYLMFT 238 (524)
T ss_pred EeCCCChHHHHHHHHHHHHHcCCEEEEECCCCCHHHHHHHHHHHHHcCCCcccEEEEecCCchHHHHHHhc--CCEEEEE
Confidence 99999999999999999999999999999999999999999999999999999999999777888999876 6899999
Q ss_pred CCcHHHHHHHHHHHhcccceeEEEcCCCCCceEcCCCCHHHHHHHHHHHhhccCCCCcccCceEEEeCchHHHHHHHHHH
Q 015042 158 GSTDVGRLVMQAAAASNLKQVSLELGGKSPLLIFDDADLDTAADVALLGNLYNKGEICVASSRVFVQEGIYDKFEKKLLE 237 (414)
Q Consensus 158 Gs~~~g~~i~~~~a~~~~~~~~~e~gg~~~~iV~~dadl~~aa~~i~~~~~~~~Gq~C~a~~~i~V~~~i~d~f~~~l~~ 237 (414)
||.++|+.|++.++ .+++|+++|+|||||+||++|||++.|++.+++++|.|+||.|+++++||||+++||+|+++|++
T Consensus 239 Gs~~~g~~v~~~aa-~~~~~v~lElGGknp~iV~~dADl~~Aa~~i~~~~f~~sGQ~C~a~~rv~V~~~v~d~f~~~L~~ 317 (524)
T PRK09407 239 GSTATGRVLAEQAG-RRLIGFSLELGGKNPMIVLDDADLDKAAAGAVRACFSNAGQLCISIERIYVHESIYDEFVRAFVA 317 (524)
T ss_pred CCHHHHHHHHHHHH-hcCCcEEEECCCCceeEECCCCCHHHHHHHHHHHHHhcCCCCCCCCcEEEEcHHHHHHHHHHHHH
Confidence 99999999999988 88999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhhcccCCCCCCCCcccccCCHHHHHHHHHHHHHHHHcCCEEEeCCcccC-CCCceeeeEEEeeCCCcccccccceecc
Q 015042 238 KAKAWLVGDPFDPTVRQGPQISERHFDRILSYIEHGKREGATLLTGGKPIG-DKGYYIEPTIFTNVKEDMIIAKEEIFGP 316 (414)
Q Consensus 238 ~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~-~~g~~~~Ptvl~~~~~~~~~~~~E~fgP 316 (414)
+++++++|+|.++++++||++++.+++++++++++++++|+++++||.... ..|+|++|||+.+++++|.+++||+|||
T Consensus 318 ~~~~l~~G~~~~~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~vl~gG~~~~~~~g~~~~Ptvl~~v~~~~~i~~eE~FGP 397 (524)
T PRK09407 318 AVRAMRLGAGYDYSADMGSLISEAQLETVSAHVDDAVAKGATVLAGGKARPDLGPLFYEPTVLTGVTPDMELAREETFGP 397 (524)
T ss_pred HHHhcCCCCCCCcCCccCCCCCHHHHHHHHHHHHHHHhCCCEEEeCCccCCCCCCceEeCEEEeCCCCCChHHhCCCCCC
Confidence 999999999999999999999999999999999999999999999997533 2579999999999999999999999999
Q ss_pred eEEEEeeCCHHHHHHHhhcCCCCceEEEecCCHHHHHHHHHhcceeEEEEcCcCC---CCCCCCcccCCCCCCCccchHH
Q 015042 317 VMALMKFKTVEEAIKSANNTQYGLAAGIVTKDLNVANTVSRSIRAGIIWINCYFG---FSMDCPYGGYKMSGFGREYGLE 393 (414)
Q Consensus 317 vl~v~~~~~~~eai~~~n~~~~gl~~sv~s~d~~~~~~~~~~l~~g~v~iN~~~~---~~~~~p~gG~~~sG~g~~~g~~ 393 (414)
|++|++|+|+||||+++|+++|||++||||+|.++++++++++++|.|+||++.. ..+.+||||+|.||+|+++|.+
T Consensus 398 vl~v~~~~~~deai~~~N~~~~gLsa~V~t~d~~~a~~~~~~l~~G~v~IN~~~~~~~~~~~~PfGG~k~SG~G~~~g~~ 477 (524)
T PRK09407 398 VVSVYPVADVDEAVERANDTPYGLNASVWTGDTARGRAIAARIRAGTVNVNEGYAAAWGSVDAPMGGMKDSGLGRRHGAE 477 (524)
T ss_pred eEEEEeeCCHHHHHHHHhCCCCCceEEEECCCHHHHHHHHHhCCcceEEECCCCCcCcCCCCCCCCCccccccCccchHH
Confidence 9999999999999999999999999999999999999999999999999998754 3457899999999999999999
Q ss_pred HHHhhheeeEEEeeC
Q 015042 394 SLYKYLQIKSVVTPI 408 (414)
Q Consensus 394 ~~~~~~~~k~i~~~~ 408 (414)
|+++|+++|+|+.+.
T Consensus 478 ~l~~ft~~k~v~~~~ 492 (524)
T PRK09407 478 GLLKYTESQTIATQR 492 (524)
T ss_pred HHHHhCCeEEEEEcc
Confidence 999999999998763
|
|
| >cd07146 ALDH_PhpJ Streptomyces putative phosphonoformaldehyde dehydrogenase PhpJ-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.6e-85 Score=659.26 Aligned_cols=398 Identities=37% Similarity=0.601 Sum_probs=372.3
Q ss_pred CHHHHHHHHHhHHHHHHHHHHhcCCChHHHhhchHHHHHHHHHHHHHhhhhhcCcccccC-----CCcccceeecCCceE
Q 015042 1 MWKFADLIEEHVEELAALDALDAGKVYLRAKTAEIPGAAEFLRFFAGAADKIHGEVLKMS-----SELQGYTLREPVGVV 75 (414)
Q Consensus 1 L~~~a~~l~~~~~~l~~~~~~etGk~~~e~~~~ei~~~~~~l~~~a~~~~~~~~~~~~~~-----~~~~~~~~~~P~Gvv 75 (414)
|+++++.|++|+++|++++++|+|||..++ ..|+..+++.+++++.......++..+.. .+...+.+++|+|||
T Consensus 46 L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a-~~ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv 124 (451)
T cd07146 46 LNKAAALLEARREEFARLITLESGLCLKDT-RYEVGRAADVLRFAAAEALRDDGESFSCDLTANGKARKIFTLREPLGVV 124 (451)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCCHHHH-HHHHHHHHHHHHHHHHHHHHhcCcccccccccCCCCceEEEEEeccceE
Confidence 578999999999999999999999999986 46999999999999987765544433221 234467889999999
Q ss_pred EEEcCCccchHHHHHhHHHHHhhCCeEEeecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhhHHHhhhCCCccEEE
Q 015042 76 GHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLTALYYAHLAKLAGIPDGVLNVVPGFGPTAGAAICSHMDIDYVC 155 (414)
Q Consensus 76 ~~i~p~n~P~~~~~~~~~~aLaaGN~vv~kps~~~~~~~~~l~~~l~~aG~p~g~v~~v~~~~~~~~~~l~~~~~v~~v~ 155 (414)
++|+|||||++..++++++||++||+||+|||+.+|+++..+.++|.++|+|+|+++++++++.++++.|+.||++|.|.
T Consensus 125 ~~I~P~N~P~~~~~~~~~~ALaaGN~VilKps~~~p~~~~~l~~~l~~aglP~g~v~~v~g~~~~~~~~l~~~~~i~~V~ 204 (451)
T cd07146 125 LAITPFNHPLNQVAHKIAPAIAANNRIVLKPSEKTPLSAIYLADLLYEAGLPPDMLSVVTGEPGEIGDELITHPDVDLVT 204 (451)
T ss_pred EEEccCChHHHHHHHHHHHHHHcCCEEEEECCCCchHHHHHHHHHHHHcCcCccceEEEecCchHHHHHHhcCCCCCEEE
Confidence 99999999999999999999999999999999999999999999999999999999999997778899999999999999
Q ss_pred EeCCcHHHHHHHHHHHhcccceeEEEcCCCCCceEcCCCCHHHHHHHHHHHhhccCCCCcccCceEEEeCchHHHHHHHH
Q 015042 156 FTGSTDVGRLVMQAAAASNLKQVSLELGGKSPLLIFDDADLDTAADVALLGNLYNKGEICVASSRVFVQEGIYDKFEKKL 235 (414)
Q Consensus 156 ~tGs~~~g~~i~~~~a~~~~~~~~~e~gg~~~~iV~~dadl~~aa~~i~~~~~~~~Gq~C~a~~~i~V~~~i~d~f~~~l 235 (414)
||||+.+|+.|.+.++ .+|+++|+|||||+||++|||++.|++.+++++|.|+||.|+++++||||++++|+|+++|
T Consensus 205 fTGs~~~g~~i~~~a~---~~~~~lElGG~~p~iV~~daDl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~d~f~~~l 281 (451)
T cd07146 205 FTGGVAVGKAIAATAG---YKRQLLELGGNDPLIVMDDADLERAATLAVAGSYANSGQRCTAVKRILVHESVADEFVDLL 281 (451)
T ss_pred EECCHHHHHHHHHHhc---CCceeeecCCCceEEECCCCCHHHHHHHHHHHHHhhCCCCCCCCceEEEchHHHHHHHHHH
Confidence 9999999999998764 5799999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhhcccCCCCCCCCcccccCCHHHHHHHHHHHHHHHHcCCEEEeCCcccCCCCceeeeEEEeeCCCcccccccceec
Q 015042 236 LEKAKAWLVGDPFDPTVRQGPQISERHFDRILSYIEHGKREGATLLTGGKPIGDKGYYIEPTIFTNVKEDMIIAKEEIFG 315 (414)
Q Consensus 236 ~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fg 315 (414)
+++++++++|+|.++++.+||++++.+++++++++++++++|+++++||.. .|+|++|||+.+++++|.+++||+||
T Consensus 282 ~~~~~~l~~g~p~~~~~~~gpli~~~~~~~v~~~v~~a~~~Ga~vl~gg~~---~g~~~~Ptvl~~~~~~~~~~~eE~Fg 358 (451)
T cd07146 282 VEKSAALVVGDPMDPATDMGTVIDEEAAIQIENRVEEAIAQGARVLLGNQR---QGALYAPTVLDHVPPDAELVTEETFG 358 (451)
T ss_pred HHHHhcCCCCCCCCCCCCcCCCCCHHHHHHHHHHHHHHHhCCCEEEeCCCc---CCEEEcCEEeecCCCCCHHHhCCCCC
Confidence 999999999999999999999999999999999999999999999999864 58999999999999999999999999
Q ss_pred ceEEEEeeCCHHHHHHHhhcCCCCceEEEecCCHHHHHHHHHhcceeEEEEcCcCCC-CCCCCcccCCCCCC-CccchHH
Q 015042 316 PVMALMKFKTVEEAIKSANNTQYGLAAGIVTKDLNVANTVSRSIRAGIIWINCYFGF-SMDCPYGGYKMSGF-GREYGLE 393 (414)
Q Consensus 316 Pvl~v~~~~~~~eai~~~n~~~~gl~~sv~s~d~~~~~~~~~~l~~g~v~iN~~~~~-~~~~p~gG~~~sG~-g~~~g~~ 393 (414)
||++|++|+|++||++++|+++|||++||||+|.+.++++++++++|+|+||+.+.. .+.+||||+|.||+ |+++|++
T Consensus 359 Pvl~v~~~~~~~eai~~~n~~~~gL~~~i~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~~PfGG~k~SG~~g~~~g~~ 438 (451)
T cd07146 359 PVAPVIRVKDLDEAIAISNSTAYGLSSGVCTNDLDTIKRLVERLDVGTVNVNEVPGFRSELSPFGGVKDSGLGGKEGVRE 438 (451)
T ss_pred CeEEEEEeCCHHHHHHHHhCCCCCceEEEECCCHHHHHHHHHHCCcceEEECCCCCCCCCCCCcCcccccCCCcccChHH
Confidence 999999999999999999999999999999999999999999999999999987554 46799999999995 8999999
Q ss_pred HHHhhheeeEEE
Q 015042 394 SLYKYLQIKSVV 405 (414)
Q Consensus 394 ~~~~~~~~k~i~ 405 (414)
|+++||++|++.
T Consensus 439 ~~~~f~~~k~~~ 450 (451)
T cd07146 439 AMKEMTNVKTYS 450 (451)
T ss_pred HHHHHhceeEEe
Confidence 999999999985
|
Putative phosphonoformaldehyde dehydrogenase (PhpJ), an aldehyde dehydrogenase homolog reportedly involved in the biosynthesis of phosphinothricin tripeptides in Streptomyces viridochromogenes DSM 40736, and similar sequences are included in this CD. |
| >cd07083 ALDH_P5CDH ALDH subfamily NAD+-dependent delta(1)-pyrroline-5-carboxylate dehydrogenase-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.1e-85 Score=666.03 Aligned_cols=404 Identities=32% Similarity=0.559 Sum_probs=377.2
Q ss_pred CHHHHHHHHHhHHHHHHHHHHhcCCChHHHhhchHHHHHHHHHHHHHhhhhhcCccc--ccCCCcccceeecCCceEEEE
Q 015042 1 MWKFADLIEEHVEELAALDALDAGKVYLRAKTAEIPGAAEFLRFFAGAADKIHGEVL--KMSSELQGYTLREPVGVVGHI 78 (414)
Q Consensus 1 L~~~a~~l~~~~~~l~~~~~~etGk~~~e~~~~ei~~~~~~l~~~a~~~~~~~~~~~--~~~~~~~~~~~~~P~Gvv~~i 78 (414)
|+++++.|++++++|++++++|+|||..+. ..|+..+++.+++++..+.+..+... +...+...+.+++|+|||++|
T Consensus 83 L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a-~~ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I 161 (500)
T cd07083 83 LLKAADLLRRRRRELIATLTYEVGKNWVEA-IDDVAEAIDFIRYYARAALRLRYPAVEVVPYPGEDNESFYVGLGAGVVI 161 (500)
T ss_pred HHHHHHHHHhCHHHHHHHHHHHhCCCHHHH-HHHHHHHHHHHHHHHHHHHHhcCcccccCCCCCceEEEEEeccceEEEE
Confidence 578999999999999999999999999974 56999999999999988876654322 122345678889999999999
Q ss_pred cCCccchHHHHHhHHHHHhhCCeEEeecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhhHHHhhhCCCccEEEEeC
Q 015042 79 IPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLTALYYAHLAKLAGIPDGVLNVVPGFGPTAGAAICSHMDIDYVCFTG 158 (414)
Q Consensus 79 ~p~n~P~~~~~~~~~~aLaaGN~vv~kps~~~~~~~~~l~~~l~~aG~p~g~v~~v~~~~~~~~~~l~~~~~v~~v~~tG 158 (414)
+|||||+...++++++||++||+||+|||+.+|.++..+.+++.++|+|+|+++++++++.+.++.|+.||++|.|.|||
T Consensus 162 ~P~N~P~~~~~~~~~~ALaaGN~VVlKPs~~tp~~~~~l~~~~~eaGlP~gvv~~v~g~~~~~~~~L~~~~~v~~v~ftG 241 (500)
T cd07083 162 SPWNFPVAIFTGMIVAPVAVGNTVIAKPAEDAVVVGYKVFEIFHEAGFPPGVVQFLPGVGEEVGAYLTEHERIRGINFTG 241 (500)
T ss_pred cCCccHHHHHHHHHHHHHHcCCeEEEeCCCcchHHHHHHHHHHHHcCCCCCceEEEeCCCchhHHHHhcCCCcCEEEEEC
Confidence 99999999999999999999999999999999999999999999999999999999997778899999999999999999
Q ss_pred CcHHHHHHHHHHHhccc------ceeEEEcCCCCCceEcCCCCHHHHHHHHHHHhhccCCCCcccCceEEEeCchHHHHH
Q 015042 159 STDVGRLVMQAAAASNL------KQVSLELGGKSPLLIFDDADLDTAADVALLGNLYNKGEICVASSRVFVQEGIYDKFE 232 (414)
Q Consensus 159 s~~~g~~i~~~~a~~~~------~~~~~e~gg~~~~iV~~dadl~~aa~~i~~~~~~~~Gq~C~a~~~i~V~~~i~d~f~ 232 (414)
|+.+|+.|.+.++ .++ +|+++|+|||||+||++|||++.|++.+++++|.|+||.|+++++||||++++|+|+
T Consensus 242 s~~~g~~v~~~aa-~~~~~~~~~~~v~lElgG~~~~iV~~dadl~~aa~~i~~~~f~~~GQ~C~a~~rv~V~~~i~d~f~ 320 (500)
T cd07083 242 SLETGKKIYEAAA-RLAPGQTWFKRLYVETGGKNAIIVDETADFELVVEGVVVSAFGFQGQKCSAASRLILTQGAYEPVL 320 (500)
T ss_pred cHHHHHHHHHHHh-hccccccccCcEEEecCCCCeEEECCCCCHHHHHHHHHHHHHhhcCCCCCCCeeEEEcHHHHHHHH
Confidence 9999999999987 554 899999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhhcccCCCCCCCCcccccCCHHHHHHHHHHHHHHHHcCCEEEeCCcccCCCCceeeeEEEeeCCCcccccccc
Q 015042 233 KKLLEKAKAWLVGDPFDPTVRQGPQISERHFDRILSYIEHGKREGATLLTGGKPIGDKGYYIEPTIFTNVKEDMIIAKEE 312 (414)
Q Consensus 233 ~~l~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E 312 (414)
++|+++++++++|+|.++++++||++++.+++++++++++++..| ++++||....+.|+|+.|||+.+++++|.+++||
T Consensus 321 ~~l~~~~~~~~~G~p~~~~~~~Gpli~~~~~~~v~~~i~~a~~~g-~vl~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~eE 399 (500)
T cd07083 321 ERLLKRAERLSVGPPEENGTDLGPVIDAEQEAKVLSYIEHGKNEG-QLVLGGKRLEGEGYFVAPTVVEEVPPKARIAQEE 399 (500)
T ss_pred HHHHHHHHcCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHhCC-EEEeCCCcCCCCCeEEccEEEeCCCCCChHhhCC
Confidence 999999999999999999999999999999999999999999877 9999997655568999999999999999999999
Q ss_pred eecceEEEEeeC--CHHHHHHHhhcCCCCceEEEecCCHHHHHHHHHhcceeEEEEcCcCCC--CCCCCcccCCCCCCC-
Q 015042 313 IFGPVMALMKFK--TVEEAIKSANNTQYGLAAGIVTKDLNVANTVSRSIRAGIIWINCYFGF--SMDCPYGGYKMSGFG- 387 (414)
Q Consensus 313 ~fgPvl~v~~~~--~~~eai~~~n~~~~gl~~sv~s~d~~~~~~~~~~l~~g~v~iN~~~~~--~~~~p~gG~~~sG~g- 387 (414)
+||||++|++|+ |++|||+++|+++|||++||||+|.+.+.++++++++|+|+||+.... .+.+||||+|.||+|
T Consensus 400 ~FgPvl~v~~~~d~~~~eai~~~n~~~~gL~~~v~t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~~~PfGG~k~SG~G~ 479 (500)
T cd07083 400 IFGPVLSVIRYKDDDFAEALEVANSTPYGLTGGVYSRKREHLEEARREFHVGNLYINRKITGALVGVQPFGGFKLSGTNA 479 (500)
T ss_pred CCCceEEEEEeCCCCHHHHHHHHhCCCCCceEEEEeCCHHHHHHHHHhCCeeEEEECCCCCCCCCCCCCCCccccccCCC
Confidence 999999999999 999999999999999999999999999999999999999999998653 356899999999999
Q ss_pred ccchHHHHHhhheeeEEEee
Q 015042 388 REYGLESLYKYLQIKSVVTP 407 (414)
Q Consensus 388 ~~~g~~~~~~~~~~k~i~~~ 407 (414)
+++|++++++||++|+++..
T Consensus 480 ~~~g~~~l~~~~~~k~~~~~ 499 (500)
T cd07083 480 KTGGPHYLRRFLEMKAVAER 499 (500)
T ss_pred cccCHHHHHHhhheeEEEEc
Confidence 68899999999999998754
|
ALDH subfamily of the NAD+-dependent, delta(1)-pyrroline-5-carboxylate dehydrogenases (P5CDH, EC=1.5.1.12). The proline catabolic enzymes, proline dehydrogenase and P5CDH catalyze the two-step oxidation of proline to glutamate. P5CDH catalyzes the oxidation of glutamate semialdehyde, utilizing NAD+ as the electron acceptor. In some bacteria, the two enzymes are fused into the bifunctional flavoenzyme, proline utilization A (PutA). These enzymes play important roles in cellular redox control, superoxide generation, and apoptosis. In certain prokaryotes such as Escherichia coli, PutA is also a transcriptional repressor of the proline utilization genes. Monofunctional enzyme sequences such as those seen in the Bacillus RocA P5CDH are also present in this subfamily as well as the human ALDH4A1 P5CDH and the Drosophila Aldh17 P5CDH. |
| >PRK03137 1-pyrroline-5-carboxylate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.5e-85 Score=667.44 Aligned_cols=403 Identities=35% Similarity=0.585 Sum_probs=375.6
Q ss_pred CHHHHHHHHHhHHHHHHHHHHhcCCChHHHhhchHHHHHHHHHHHHHhhhhhcCc-ccccCCCcccceeecCCceEEEEc
Q 015042 1 MWKFADLIEEHVEELAALDALDAGKVYLRAKTAEIPGAAEFLRFFAGAADKIHGE-VLKMSSELQGYTLREPVGVVGHII 79 (414)
Q Consensus 1 L~~~a~~l~~~~~~l~~~~~~etGk~~~e~~~~ei~~~~~~l~~~a~~~~~~~~~-~~~~~~~~~~~~~~~P~Gvv~~i~ 79 (414)
|+++++.|++++++|++++++|+|||..++. .|+..+++.+++++..+.+.... ......+...+++++|+|||++|+
T Consensus 101 L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a~-~ev~~~~~~~~~~a~~~~~~~~~~~~~~~~g~~~~~~~~P~GVv~~I~ 179 (514)
T PRK03137 101 LLRAAAIIRRRKHEFSAWLVKEAGKPWAEAD-ADTAEAIDFLEYYARQMLKLADGKPVESRPGEHNRYFYIPLGVGVVIS 179 (514)
T ss_pred HHHHHHHHHHCHHHHHHHHHHHcCCCHHHHH-HHHHHHHHHHHHHHHHHHHhcCCccccCCCCceEEEEEecCcEEEEEC
Confidence 5789999999999999999999999999864 69999999999999887665322 222224556789999999999999
Q ss_pred CCccchHHHHHhHHHHHhhCCeEEeecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhhHHHhhhCCCccEEEEeCC
Q 015042 80 PWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLTALYYAHLAKLAGIPDGVLNVVPGFGPTAGAAICSHMDIDYVCFTGS 159 (414)
Q Consensus 80 p~n~P~~~~~~~~~~aLaaGN~vv~kps~~~~~~~~~l~~~l~~aG~p~g~v~~v~~~~~~~~~~l~~~~~v~~v~~tGs 159 (414)
|||||+...++++++||++||+||+|||+.+|.++..+.+++.++|+|+|+++++++++.+.++.|+.||+++.|.||||
T Consensus 180 PwN~P~~~~~~~i~~ALaaGN~VVlKPs~~tp~~a~~l~~~l~~aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~V~fTGs 259 (514)
T PRK03137 180 PWNFPFAIMAGMTLAAIVAGNTVLLKPASDTPVIAAKFVEVLEEAGLPAGVVNFVPGSGSEVGDYLVDHPKTRFITFTGS 259 (514)
T ss_pred CCccHHHHHHHHHHHHHHcCCEEEEECCCCCcHHHHHHHHHHHHhCCCCCcEEEeecCchHHHHHHhcCCCcCEEEEECC
Confidence 99999999999999999999999999999999999999999999999999999999977788999999999999999999
Q ss_pred cHHHHHHHHHHHhc------ccceeEEEcCCCCCceEcCCCCHHHHHHHHHHHhhccCCCCcccCceEEEeCchHHHHHH
Q 015042 160 TDVGRLVMQAAAAS------NLKQVSLELGGKSPLLIFDDADLDTAADVALLGNLYNKGEICVASSRVFVQEGIYDKFEK 233 (414)
Q Consensus 160 ~~~g~~i~~~~a~~------~~~~~~~e~gg~~~~iV~~dadl~~aa~~i~~~~~~~~Gq~C~a~~~i~V~~~i~d~f~~ 233 (414)
+.+|+.|++.++ . +++|+++|+|||||+||++|||++.|++.+++++|.|+||.|+++++||||+++||+|++
T Consensus 260 ~~~G~~i~~~aa-~~~~~~~~l~~v~lElgGk~~~iV~~daDl~~Aa~~i~~~~~~~~GQ~C~a~~rv~V~~~v~d~f~~ 338 (514)
T PRK03137 260 REVGLRIYERAA-KVQPGQIWLKRVIAEMGGKDAIVVDEDADLDLAAESIVASAFGFSGQKCSACSRAIVHEDVYDEVLE 338 (514)
T ss_pred cHHHHHHHHHHh-cccccccccceEEecCCCCCeEEECCCCCHHHHHHHHHHHHHhCCCCCCccCeEEEEeHHHHHHHHH
Confidence 999999999887 4 689999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhhcccCCCCCCCCcccccCCHHHHHHHHHHHHHHHHcCCEEEeCCcccCCCCceeeeEEEeeCCCcccccccce
Q 015042 234 KLLEKAKAWLVGDPFDPTVRQGPQISERHFDRILSYIEHGKREGATLLTGGKPIGDKGYYIEPTIFTNVKEDMIIAKEEI 313 (414)
Q Consensus 234 ~l~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~ 313 (414)
+|++.++++++|+|.++. ++||+++..+++++.+++++++.+ +++++||......|+|++|||+.+++++|++++||+
T Consensus 339 ~l~~~~~~l~~g~p~~~~-~~Gpli~~~~~~~v~~~v~~a~~~-~~vl~Gg~~~~~~g~~~~Ptvl~~v~~~~~~~~eE~ 416 (514)
T PRK03137 339 KVVELTKELTVGNPEDNA-YMGPVINQASFDKIMSYIEIGKEE-GRLVLGGEGDDSKGYFIQPTIFADVDPKARIMQEEI 416 (514)
T ss_pred HHHHHHHhCCCCCCCCcc-CcCCCCCHHHHHHHHHHHHHHHhC-CEEEeCCCcCCCCceEEeeEEEeCCCCCCHHHhCCC
Confidence 999999999999999998 999999999999999999999887 699999976545689999999999999999999999
Q ss_pred ecceEEEEeeCCHHHHHHHhhcCCCCceEEEecCCHHHHHHHHHhcceeEEEEcCcCC--CCCCCCcccCCCCCCC-ccc
Q 015042 314 FGPVMALMKFKTVEEAIKSANNTQYGLAAGIVTKDLNVANTVSRSIRAGIIWINCYFG--FSMDCPYGGYKMSGFG-REY 390 (414)
Q Consensus 314 fgPvl~v~~~~~~~eai~~~n~~~~gl~~sv~s~d~~~~~~~~~~l~~g~v~iN~~~~--~~~~~p~gG~~~sG~g-~~~ 390 (414)
||||++|++|+|++||++++|+++|||++||||+|.+.++++++++++|+|+||+... ..+.+||||+|.||+| +++
T Consensus 417 FgPvl~v~~~~~~~eai~~~N~~~~gL~a~v~t~d~~~a~~~~~~l~~G~v~IN~~~~~~~~~~~PfGG~k~SG~G~~~g 496 (514)
T PRK03137 417 FGPVVAFIKAKDFDHALEIANNTEYGLTGAVISNNREHLEKARREFHVGNLYFNRGCTGAIVGYHPFGGFNMSGTDSKAG 496 (514)
T ss_pred CCceEEEEecCCHHHHHHHHhCCCCCceEEEEcCCHHHHHHHHHhCCcCeEEECCCCCCCCCCCCCCCCcccccCCcccC
Confidence 9999999999999999999999999999999999999999999999999999998754 3356899999999999 699
Q ss_pred hHHHHHhhheeeEEEee
Q 015042 391 GLESLYKYLQIKSVVTP 407 (414)
Q Consensus 391 g~~~~~~~~~~k~i~~~ 407 (414)
|.+++++||++|+|...
T Consensus 497 g~~~l~~ft~~k~v~~~ 513 (514)
T PRK03137 497 GPDYLLLFLQAKTVSEM 513 (514)
T ss_pred CHHHHHHhceEEEEEEe
Confidence 99999999999998764
|
|
| >cd07111 ALDH_F16 Aldehyde dehydrogenase family 16A1-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.5e-85 Score=662.10 Aligned_cols=391 Identities=43% Similarity=0.740 Sum_probs=370.7
Q ss_pred CHHHHHHHHHhHHHHHHHHHHhcCCChHHHhhchHHHHHHHHHHHHHhhhhhcCcccccCCCcccceeecCCceEEEEcC
Q 015042 1 MWKFADLIEEHVEELAALDALDAGKVYLRAKTAEIPGAAEFLRFFAGAADKIHGEVLKMSSELQGYTLREPVGVVGHIIP 80 (414)
Q Consensus 1 L~~~a~~l~~~~~~l~~~~~~etGk~~~e~~~~ei~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p 80 (414)
|+++++.|++++++|++++++|+|||..+++..|+..+++.+++++.+.+... ..+..++|+|||++|+|
T Consensus 87 L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a~~~ev~~~~~~~~~~~~~~~~~~----------~~~~~~~P~GVV~~I~P 156 (480)
T cd07111 87 LYRIARHIQKHQRLFAVLESLDNGKPIRESRDCDIPLVARHFYHHAGWAQLLD----------TELAGWKPVGVVGQIVP 156 (480)
T ss_pred HHHHHHHHHHhHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhc----------CCcccceecceEEEECC
Confidence 57899999999999999999999999998765699999999998887765432 12356899999999999
Q ss_pred CccchHHHHHhHHHHHhhCCeEEeecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhhHHHhhhCCCccEEEEeCCc
Q 015042 81 WNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLTALYYAHLAKLAGIPDGVLNVVPGFGPTAGAAICSHMDIDYVCFTGST 160 (414)
Q Consensus 81 ~n~P~~~~~~~~~~aLaaGN~vv~kps~~~~~~~~~l~~~l~~aG~p~g~v~~v~~~~~~~~~~l~~~~~v~~v~~tGs~ 160 (414)
||||+...++++++||++||+||+|||+.+|.++..+.+++.++|+|+|+++++++++ +.+..|+.||++|.|.||||+
T Consensus 157 wN~P~~~~~~~i~~ALaaGN~VVlKps~~tp~~~~~l~~~~~~aGlP~gvv~~v~g~~-~~~~~l~~~~~v~~v~ftGs~ 235 (480)
T cd07111 157 WNFPLLMLAWKICPALAMGNTVVLKPAEYTPLTALLFAEICAEAGLPPGVLNIVTGNG-SFGSALANHPGVDKVAFTGST 235 (480)
T ss_pred CccHHHHHHHHHHHHHHcCCEEEEECCCCChHHHHHHHHHHHhcCCCcccEEEEeCCc-hHHHHHhcCCCcCEEEEECCH
Confidence 9999999999999999999999999999999999999999999999999999999854 678999999999999999999
Q ss_pred HHHHHHHHHHHhcccceeEEEcCCCCCceEcCCCCHHHHHHHHHHHhhccCCCCcccCceEEEeCchHHHHHHHHHHHHh
Q 015042 161 DVGRLVMQAAAASNLKQVSLELGGKSPLLIFDDADLDTAADVALLGNLYNKGEICVASSRVFVQEGIYDKFEKKLLEKAK 240 (414)
Q Consensus 161 ~~g~~i~~~~a~~~~~~~~~e~gg~~~~iV~~dadl~~aa~~i~~~~~~~~Gq~C~a~~~i~V~~~i~d~f~~~l~~~~~ 240 (414)
.+|+.|.+.++ .+++|+++|+|||||+||++|+|++.|++.+++++|.|+||.|+++++||||++++|+|+++|++.++
T Consensus 236 ~~g~~v~~~aa-~~~~~~~lElGGk~p~iV~~daDl~~aa~~i~~~~f~~~GQ~C~a~~ri~V~~~i~d~f~~~l~~~~~ 314 (480)
T cd07111 236 EVGRALRRATA-GTGKKLSLELGGKSPFIVFDDADLDSAVEGIVDAIWFNQGQVCCAGSRLLVQESVAEELIRKLKERMS 314 (480)
T ss_pred HHHHHHHHHHh-ccCCcEEEEcCCCceEEECCCCCHHHHHHHHHHHHHhcCCCcCcCCceEEEcHHHHHHHHHHHHHHHH
Confidence 99999999988 88999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hcccCCCCCCCCcccccCCHHHHHHHHHHHHHHHHcCCEEEeCCcccCCCCceeeeEEEeeCCCcccccccceecceEEE
Q 015042 241 AWLVGDPFDPTVRQGPQISERHFDRILSYIEHGKREGATLLTGGKPIGDKGYYIEPTIFTNVKEDMIIAKEEIFGPVMAL 320 (414)
Q Consensus 241 ~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v 320 (414)
++++|+|.++++++||++++.+++++.+++++++.+|+++++||...++.|+|+.|||+.+++++|.+++||+||||++|
T Consensus 315 ~~~vg~p~~~~~~~gpli~~~~~~~v~~~i~~a~~~ga~~~~gg~~~~~~g~~~~Ptvl~~~~~~~~i~~eE~FgPvl~v 394 (480)
T cd07111 315 HLRVGDPLDKAIDMGAIVDPAQLKRIRELVEEGRAEGADVFQPGADLPSKGPFYPPTLFTNVPPASRIAQEEIFGPVLVV 394 (480)
T ss_pred hcCCCCCCCCCCccccccCHHHHHHHHHHHHHHHHCCCEEEeCCCcCCCCCeEEeeEEEecCCCCChhhcCCCCCCeeEe
Confidence 99999999999999999999999999999999999999999998754457899999999999999999999999999999
Q ss_pred EeeCCHHHHHHHhhcCCCCceEEEecCCHHHHHHHHHhcceeEEEEcCcCCCCCCCCcccCCCCCCCccchHHHHHhhhe
Q 015042 321 MKFKTVEEAIKSANNTQYGLAAGIVTKDLNVANTVSRSIRAGIIWINCYFGFSMDCPYGGYKMSGFGREYGLESLYKYLQ 400 (414)
Q Consensus 321 ~~~~~~~eai~~~n~~~~gl~~sv~s~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~p~gG~~~sG~g~~~g~~~~~~~~~ 400 (414)
++|+|++|||+++|+++|||++||||+|.+.+.++++++++|+|+||+.....+.+||||+|.||+|+++|++|+++||+
T Consensus 395 ~~~~~~deai~~~n~~~~gL~~~i~t~d~~~~~~~~~~l~aG~v~iN~~~~~~~~~PfGG~k~SG~G~~~g~~~~~~~~~ 474 (480)
T cd07111 395 LTFRTAKEAVALANNTPYGLAASVWSENLSLALEVALSLKAGVVWINGHNLFDAAAGFGGYRESGFGREGGKEGLYEYLR 474 (480)
T ss_pred ecCCCHHHHHHHHhCCCCCceEEEEcCCHHHHHHHHHhCCEeeEEECCCCCCCCCCCcCCcccccCCccchHHHHHHHhh
Confidence 99999999999999999999999999999999999999999999999988777789999999999999999999999999
Q ss_pred eeE
Q 015042 401 IKS 403 (414)
Q Consensus 401 ~k~ 403 (414)
+|+
T Consensus 475 ~k~ 477 (480)
T cd07111 475 PSW 477 (480)
T ss_pred ccC
Confidence 885
|
Uncharacterized aldehyde dehydrogenase family 16 member A1 (ALDH16A1) and other related sequences are present in this CD. The active site cysteine and glutamate residues are not conserved in the human ALDH16A1 protein sequence. |
| >PLN02203 aldehyde dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-84 Score=657.10 Aligned_cols=401 Identities=27% Similarity=0.404 Sum_probs=371.1
Q ss_pred CHHHHHHHHHhHHHHHHHHHHhcCCChHHHhhchHHHHHHHHHHHHHhhhhhcCc---cccc-CCCcccceeecCCceEE
Q 015042 1 MWKFADLIEEHVEELAALDALDAGKVYLRAKTAEIPGAAEFLRFFAGAADKIHGE---VLKM-SSELQGYTLREPVGVVG 76 (414)
Q Consensus 1 L~~~a~~l~~~~~~l~~~~~~etGk~~~e~~~~ei~~~~~~l~~~a~~~~~~~~~---~~~~-~~~~~~~~~~~P~Gvv~ 76 (414)
|+++++.|++|+++|++++++|+|||..++...|+..+++.++++++..++..+. ..+. ..+...++.++|+|||+
T Consensus 34 L~~~a~~l~~~~~~la~~~~~e~Gk~~~ea~~~Ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~reP~GVv~ 113 (484)
T PLN02203 34 LKGLLRLLKDNEEAIFKALHQDLGKHRVEAYRDEVGVLTKSANLALSNLKKWMAPKKAKLPLVAFPATAEVVPEPLGVVL 113 (484)
T ss_pred HHHHHHHHHHhHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccCCcccCCceeEEEEecccEEE
Confidence 6789999999999999999999999999765579999999999999877665432 1111 13346789999999999
Q ss_pred EEcCCccchHHHHHhHHHHHhhCCeEEeecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhhHHHhhhCCCccEEEE
Q 015042 77 HIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLTALYYAHLAKLAGIPDGVLNVVPGFGPTAGAAICSHMDIDYVCF 156 (414)
Q Consensus 77 ~i~p~n~P~~~~~~~~~~aLaaGN~vv~kps~~~~~~~~~l~~~l~~aG~p~g~v~~v~~~~~~~~~~l~~~~~v~~v~~ 156 (414)
+|+|||||+...++++++||++||+||+|||+.+|.++..+.+++.++ +|+|++|++++ +.++++.|+.|+ +|.|.|
T Consensus 114 ~I~pwN~P~~~~~~~i~~ALaaGN~VVlKps~~tp~~~~~l~~~~~~~-lP~gvv~vv~g-~~~~~~~l~~~~-vd~v~f 190 (484)
T PLN02203 114 IFSSWNFPIGLSLEPLIGAIAAGNAVVLKPSELAPATSAFLAANIPKY-LDSKAVKVIEG-GPAVGEQLLQHK-WDKIFF 190 (484)
T ss_pred EEcCCcchHHHHHHHHHHHHHcCCEEEEECCCcChHHHHHHHHHHHHh-CCcCEEEEEeC-CHHHHHHHHhCC-CCEEEE
Confidence 999999999999999999999999999999999999999999999986 99999999998 778899999995 999999
Q ss_pred eCCcHHHHHHHHHHHhcccceeEEEcCCCCCceEcC---CCCHHHHHHHHHHHhhc-cCCCCcccCceEEEeCchHHHHH
Q 015042 157 TGSTDVGRLVMQAAAASNLKQVSLELGGKSPLLIFD---DADLDTAADVALLGNLY-NKGEICVASSRVFVQEGIYDKFE 232 (414)
Q Consensus 157 tGs~~~g~~i~~~~a~~~~~~~~~e~gg~~~~iV~~---dadl~~aa~~i~~~~~~-~~Gq~C~a~~~i~V~~~i~d~f~ 232 (414)
|||+.+|+.|++.++ ++++|+++|+|||||+||++ |||++.|++.+++++|. |+||.|++++|+|||++++|+|+
T Consensus 191 TGS~~~G~~v~~~aa-~~l~~v~lElGGknp~iV~~d~~daDl~~aa~~i~~~~f~~~aGQ~C~a~~rv~V~~~i~d~f~ 269 (484)
T PLN02203 191 TGSPRVGRIIMTAAA-KHLTPVALELGGKCPCIVDSLSSSRDTKVAVNRIVGGKWGSCAGQACIAIDYVLVEERFAPILI 269 (484)
T ss_pred ECCHHHHHHHHHHHH-hcCCCEEEEecCCCeEEEccCCCCCCHHHHHHHHHHHhcccCCCCccccCCeEEEcHHHHHHHH
Confidence 999999999999988 88999999999999999997 69999999999999995 89999999999999999999999
Q ss_pred HHHHHHHhhcccCCCCCCCCcccccCCHHHHHHHHHHHHHHHHcCCEEEeCCcccCCCCceeeeEEEeeCCCcccccccc
Q 015042 233 KKLLEKAKAWLVGDPFDPTVRQGPQISERHFDRILSYIEHGKREGATLLTGGKPIGDKGYYIEPTIFTNVKEDMIIAKEE 312 (414)
Q Consensus 233 ~~l~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E 312 (414)
++|++.++++++|+|.++ +++||+++..+++++++++++++.. +++++||... ..|+|++|||+.+++++|.+++||
T Consensus 270 ~~L~~~~~~~~~G~p~~~-~~~Gpli~~~~~~~v~~~i~~a~~~-~~~~~gg~~~-~~g~~i~PTvl~~v~~d~~i~~eE 346 (484)
T PLN02203 270 ELLKSTIKKFFGENPRES-KSMARILNKKHFQRLSNLLKDPRVA-ASIVHGGSID-EKKLFIEPTILLNPPLDSDIMTEE 346 (484)
T ss_pred HHHHHHHHHhcCCCCCcC-CCcCCCCCHHHHHHHHHHHHHHHhC-CeEEeCCCcC-CCCCEEeeEEEecCCCCCHHHhcC
Confidence 999999999999999886 6899999999999999999999886 7899998753 368999999999999999999999
Q ss_pred eecceEEEEeeCCHHHHHHHhhcCCCCceEEEecCCHHHHHHHHHhcceeEEEEcCcCC--CCCCCCcccCCCCCCCccc
Q 015042 313 IFGPVMALMKFKTVEEAIKSANNTQYGLAAGIVTKDLNVANTVSRSIRAGIIWINCYFG--FSMDCPYGGYKMSGFGREY 390 (414)
Q Consensus 313 ~fgPvl~v~~~~~~~eai~~~n~~~~gl~~sv~s~d~~~~~~~~~~l~~g~v~iN~~~~--~~~~~p~gG~~~sG~g~~~ 390 (414)
+||||++|++|+|++|||+++|+++|||++||||+|.+.++++++++++|.|+||++.. ..+.+||||+|.||+|+++
T Consensus 347 ~FGPVl~v~~~~~~~eai~~aN~~~~gL~a~vft~d~~~a~~~~~~l~~G~V~IN~~~~~~~~~~~PfGG~k~SG~Gr~~ 426 (484)
T PLN02203 347 IFGPLLPIITVKKIEDSIAFINSKPKPLAIYAFTNNEKLKRRILSETSSGSVTFNDAIIQYACDSLPFGGVGESGFGRYH 426 (484)
T ss_pred ccCCeEEEEeeCCHHHHHHHHhCCCCCceEEEEcCCHHHHHHHHHhCCcceEEECCcccccCCCCCCCCCcCcccCCccc
Confidence 99999999999999999999999999999999999999999999999999999998754 3467999999999999999
Q ss_pred hHHHHHhhheeeEEEeeC
Q 015042 391 GLESLYKYLQIKSVVTPI 408 (414)
Q Consensus 391 g~~~~~~~~~~k~i~~~~ 408 (414)
|++++++||++|+|+.+.
T Consensus 427 g~~~l~~ft~~k~v~~~~ 444 (484)
T PLN02203 427 GKYSFDTFSHEKAVLRRS 444 (484)
T ss_pred cHHHHHHhcceeEEEEcC
Confidence 999999999999998763
|
|
| >cd07108 ALDH_MGR_2402 Magnetospirillum NAD(P)+-dependent aldehyde dehydrogenase MSR-1-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.8e-85 Score=660.45 Aligned_cols=402 Identities=44% Similarity=0.746 Sum_probs=376.3
Q ss_pred CHHHHHHHHHhHHHHHHHHHHhcCCCh-HHHhhchHHHHHHHHHHHHHhhhhhcCcccccCCCcccceeecCCceEEEEc
Q 015042 1 MWKFADLIEEHVEELAALDALDAGKVY-LRAKTAEIPGAAEFLRFFAGAADKIHGEVLKMSSELQGYTLREPVGVVGHII 79 (414)
Q Consensus 1 L~~~a~~l~~~~~~l~~~~~~etGk~~-~e~~~~ei~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~ 79 (414)
|+++++.|++++++|++++++|+||+. .++ ..|+..+++.+++++.+.....+...+...+...+..++|+|||++|+
T Consensus 47 L~~~a~~l~~~~~ela~~~~~e~Gk~~~~~a-~~ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~ 125 (457)
T cd07108 47 LARIADALEARSEELARLLALETGNALRTQA-RPEAAVLADLFRYFGGLAGELKGETLPFGPDVLTYTVREPLGVVGAIL 125 (457)
T ss_pred HHHHHHHHHHhHHHHHHHHHHhcCCCcHHHH-HHHHHHHHHHHHHHHHHHHHhCCceeccCCCeeEEEEeecceEEEEEC
Confidence 578999999999999999999999997 554 469999999999999887666555443333445678899999999999
Q ss_pred CCccchHHHHHhHHHHHhhCCeEEeecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhhHHHhhhCCCccEEEEeCC
Q 015042 80 PWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLTALYYAHLAKLAGIPDGVLNVVPGFGPTAGAAICSHMDIDYVCFTGS 159 (414)
Q Consensus 80 p~n~P~~~~~~~~~~aLaaGN~vv~kps~~~~~~~~~l~~~l~~aG~p~g~v~~v~~~~~~~~~~l~~~~~v~~v~~tGs 159 (414)
|||||+...++++++||++||+||+|||+.+|.++..+.+++.++ +|+|+++++++++.+.++.|+.|+++|.|.||||
T Consensus 126 p~N~P~~~~~~~~~~ALaaGN~VVlKps~~~p~~~~~l~~~~~~~-lP~~~~~~v~g~~~~~~~~L~~~~~vd~v~ftGs 204 (457)
T cd07108 126 PWNAPLMLAALKIAPALVAGNTVVLKAAEDAPLAVLLLAEILAQV-LPAGVLNVITGYGEECGAALVDHPDVDKVTFTGS 204 (457)
T ss_pred CCchHHHHHHHHHHHHHHcCCEEEEECCCCCcHHHHHHHHHHHHh-CCcCcEEEEeCCchHHHHHHhcCCCcCEEEEECc
Confidence 999999999999999999999999999999999999999999986 9999999999877778899999999999999999
Q ss_pred cHHHHHHHHHHHhcccceeEEEcCCCCCceEcCCCCHHHHHHHHHHHh-hccCCCCcccCceEEEeCchHHHHHHHHHHH
Q 015042 160 TDVGRLVMQAAAASNLKQVSLELGGKSPLLIFDDADLDTAADVALLGN-LYNKGEICVASSRVFVQEGIYDKFEKKLLEK 238 (414)
Q Consensus 160 ~~~g~~i~~~~a~~~~~~~~~e~gg~~~~iV~~dadl~~aa~~i~~~~-~~~~Gq~C~a~~~i~V~~~i~d~f~~~l~~~ 238 (414)
+.+|+.|++.++ ++++|+++|+|||||+||++|||++.|++.+++++ |.|+||.|+++++||||++++|+|+++|++.
T Consensus 205 ~~~g~~v~~~aa-~~l~~~~lelgG~~~~iV~~dAdl~~Aa~~iv~~~~f~~~GQ~C~a~~rv~V~~~i~~~f~~~l~~~ 283 (457)
T cd07108 205 TEVGKIIYRAAA-DRLIPVSLELGGKSPMIVFPDADLDDAVDGAIAGMRFTRQGQSCTAGSRLFVHEDIYDAFLEKLVAK 283 (457)
T ss_pred HHHHHHHHHHHh-ccCCeEEEECCCCCeeEECCCCCHHHHHHHHHHhhHhhcCCCCCCCCeEEEEehHHHHHHHHHHHHH
Confidence 999999999988 78999999999999999999999999999999995 9999999999999999999999999999999
Q ss_pred HhhcccCCCCCCCCcccccCCHHHHHHHHHHHHHHHH-cCCEEEeCCcccC----CCCceeeeEEEeeCCCcccccccce
Q 015042 239 AKAWLVGDPFDPTVRQGPQISERHFDRILSYIEHGKR-EGATLLTGGKPIG----DKGYYIEPTIFTNVKEDMIIAKEEI 313 (414)
Q Consensus 239 ~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~-~ga~v~~gg~~~~----~~g~~~~Ptvl~~~~~~~~~~~~E~ 313 (414)
++++++|+|.++++++||++++.++++++++++++++ +|+++++||.... ..|+|+.|||+.+++++|.+++||+
T Consensus 284 ~~~~~vg~p~~~~~~~gpli~~~~~~~~~~~i~~a~~~~ga~vl~gG~~~~~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~ 363 (457)
T cd07108 284 LSKLKIGDPLDEATDIGAIISEKQFAKVCGYIDLGLSTSGATVLRGGPLPGEGPLADGFFVQPTIFSGVDNEWRLAREEI 363 (457)
T ss_pred HhhCCCCCCCCCCCCcCCCCCHHHHHHHHHHHHHHHhCCCCEEEeCCCcCccCCCCCceEECCEEEecCCCCChhhhcCC
Confidence 9999999999999999999999999999999999998 9999999997642 3689999999999999999999999
Q ss_pred ecceEEEEeeCCHHHHHHHhhcCCCCceEEEecCCHHHHHHHHHhcceeEEEEcCcCCCCCCCCcccCCCCCCCccchHH
Q 015042 314 FGPVMALMKFKTVEEAIKSANNTQYGLAAGIVTKDLNVANTVSRSIRAGIIWINCYFGFSMDCPYGGYKMSGFGREYGLE 393 (414)
Q Consensus 314 fgPvl~v~~~~~~~eai~~~n~~~~gl~~sv~s~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~p~gG~~~sG~g~~~g~~ 393 (414)
||||++|++|+|++|||+++|+++|||++||||+|.+.++++++++++|.|+||++....+.+||||.|.||+|+++|.+
T Consensus 364 FgPvl~v~~~~~~~eai~~~n~~~~gLs~~vft~d~~~a~~~~~~l~~g~v~iN~~~~~~~~~pfGG~k~SG~G~~~g~~ 443 (457)
T cd07108 364 FGPVLCAIPWKDEDEVIAMANDSHYGLAAYVWTRDLGRALRAAHALEAGWVQVNQGGGQQPGQSYGGFKQSGLGREASLE 443 (457)
T ss_pred CCceEEeecCCCHHHHHHHHhCCCcCceeEEEcCCHHHHHHHHHhcCcceEEECCCCCCCCCCCcCCcccCcCCCCccch
Confidence 99999999999999999999999999999999999999999999999999999998777788999999999999999997
Q ss_pred H-HHhhheeeEEE
Q 015042 394 S-LYKYLQIKSVV 405 (414)
Q Consensus 394 ~-~~~~~~~k~i~ 405 (414)
+ +++||++|+|+
T Consensus 444 ~~~~~f~~~k~i~ 456 (457)
T cd07108 444 GMLEHFTQKKTVN 456 (457)
T ss_pred hHHHHhhceEEEe
Confidence 7 69999999985
|
NAD(P)+-dependent aldehyde dehydrogenase of Magnetospirillum gryphiswaldense MSR-1 (MGR_2402) , and other similar sequences, are present in this CD. |
| >cd07099 ALDH_DDALDH Methylomonas sp | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-84 Score=659.25 Aligned_cols=401 Identities=37% Similarity=0.575 Sum_probs=375.8
Q ss_pred CHHHHHHHHHhHHHHHHHHHHhcCCChHHHhhchHHHHHHHHHHHHHhhhhhcCcc-ccc---CCCcccceeecCCceEE
Q 015042 1 MWKFADLIEEHVEELAALDALDAGKVYLRAKTAEIPGAAEFLRFFAGAADKIHGEV-LKM---SSELQGYTLREPVGVVG 76 (414)
Q Consensus 1 L~~~a~~l~~~~~~l~~~~~~etGk~~~e~~~~ei~~~~~~l~~~a~~~~~~~~~~-~~~---~~~~~~~~~~~P~Gvv~ 76 (414)
|+++++.|++++++|++++++|+|||..+ ...|+..+++.+++++..+.+..+.. .+. ..+...+.+++|+|||+
T Consensus 46 L~~~a~~l~~~~~~la~~~~~e~Gk~~~~-~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~ 124 (453)
T cd07099 46 LLRWKRALADHADELAELLHAETGKPRAD-AGLEVLLALEAIDWAARNAPRVLAPRKVPTGLLMPNKKATVEYRPYGVVG 124 (453)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHcCCCHHH-HHHHHHHHHHHHHHHHHHHHHhcCCccccCcccCCCceeEEEEecceEEE
Confidence 57899999999999999999999999985 45699999999999998877654332 221 13556788999999999
Q ss_pred EEcCCccchHHHHHhHHHHHhhCCeEEeecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhhHHHhhhCCCccEEEE
Q 015042 77 HIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLTALYYAHLAKLAGIPDGVLNVVPGFGPTAGAAICSHMDIDYVCF 156 (414)
Q Consensus 77 ~i~p~n~P~~~~~~~~~~aLaaGN~vv~kps~~~~~~~~~l~~~l~~aG~p~g~v~~v~~~~~~~~~~l~~~~~v~~v~~ 156 (414)
+|+|||||+...++++++||++||+||+|||+.+|.++..+.++|.++|+|+|+++++++++ +.++.|+.| .+|+|.|
T Consensus 125 ~I~p~N~P~~~~~~~l~~ALaaGN~vilKps~~~p~~~~~l~~~l~~ag~P~g~~~vv~g~~-~~~~~l~~~-~vd~V~f 202 (453)
T cd07099 125 VISPWNYPLLTPMGDIIPALAAGNAVVLKPSEVTPLVGELLAEAWAAAGPPQGVLQVVTGDG-ATGAALIDA-GVDKVAF 202 (453)
T ss_pred EECCCChHHHHHHHHHHHHHHcCCEEEEECCccchHHHHHHHHHHHHcCCCCCeEEEEeCCc-hHHHHHhcC-CCCEEEE
Confidence 99999999999999999999999999999999999999999999999999999999999965 778888887 4999999
Q ss_pred eCCcHHHHHHHHHHHhcccceeEEEcCCCCCceEcCCCCHHHHHHHHHHHhhccCCCCcccCceEEEeCchHHHHHHHHH
Q 015042 157 TGSTDVGRLVMQAAAASNLKQVSLELGGKSPLLIFDDADLDTAADVALLGNLYNKGEICVASSRVFVQEGIYDKFEKKLL 236 (414)
Q Consensus 157 tGs~~~g~~i~~~~a~~~~~~~~~e~gg~~~~iV~~dadl~~aa~~i~~~~~~~~Gq~C~a~~~i~V~~~i~d~f~~~l~ 236 (414)
|||+.+|+.|.+.++ .+++|+++|+|||||+||++|||++.|++.+++++|.++||.|+++++||||++++|+|+++|+
T Consensus 203 tGs~~~g~~i~~~aa-~~~~~~~lelgG~~p~iV~~dadl~~a~~~i~~~~~~~~GQ~C~a~~ri~V~~~i~d~f~~~l~ 281 (453)
T cd07099 203 TGSVATGRKVMAAAA-ERLIPVVLELGGKDPMIVLADADLERAAAAAVWGAMVNAGQTCISVERVYVHESVYDEFVARLV 281 (453)
T ss_pred ECCHHHHHHHHHHHH-hcCCeEEEECCCCCeEEECCCCCHHHHHHHHHHHHHhcCCCCCCCCcEEEEcHHHHHHHHHHHH
Confidence 999999999999988 7899999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhhcccCCCCCCCCcccccCCHHHHHHHHHHHHHHHHcCCEEEeCCcccCCCCceeeeEEEeeCCCcccccccceecc
Q 015042 237 EKAKAWLVGDPFDPTVRQGPQISERHFDRILSYIEHGKREGATLLTGGKPIGDKGYYIEPTIFTNVKEDMIIAKEEIFGP 316 (414)
Q Consensus 237 ~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgP 316 (414)
++++++++|+|.++++++||++++.+++++.+++++++++|+++++||......|+|++|||+.+++++|.++++|+|||
T Consensus 282 ~~~~~l~~G~~~~~~~~~gp~i~~~~~~~~~~~i~~a~~~ga~~~~gg~~~~~~g~~~~Ptil~~~~~~~~~~~~E~FgP 361 (453)
T cd07099 282 AKARALRPGADDIGDADIGPMTTARQLDIVRRHVDDAVAKGAKALTGGARSNGGGPFYEPTVLTDVPHDMDVMREETFGP 361 (453)
T ss_pred HHHHhccCCCCCCCCCcccCCcCHHHHHHHHHHHHHHHhCCCEEEeCCCcCCCCCeEEecEEEecCCCCCHHHhCCCcCC
Confidence 99999999999999999999999999999999999999999999999976534689999999999999999999999999
Q ss_pred eEEEEeeCCHHHHHHHhhcCCCCceEEEecCCHHHHHHHHHhcceeEEEEcCcCC--CCCCCCcccCCCCCCCccchHHH
Q 015042 317 VMALMKFKTVEEAIKSANNTQYGLAAGIVTKDLNVANTVSRSIRAGIIWINCYFG--FSMDCPYGGYKMSGFGREYGLES 394 (414)
Q Consensus 317 vl~v~~~~~~~eai~~~n~~~~gl~~sv~s~d~~~~~~~~~~l~~g~v~iN~~~~--~~~~~p~gG~~~sG~g~~~g~~~ 394 (414)
|++|++|+|.+|||+++|+++|||++||||+|.+.++++++++++|.|+||+... ..+.+||||+|.||+|+++|+++
T Consensus 362 vl~v~~~~~~~eai~~~n~~~~gL~~~i~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~~~PfGG~~~SG~g~~~g~~~ 441 (453)
T cd07099 362 VLPVMPVADEDEAIALANDSRYGLSASVFSRDLARAEAIARRLEAGAVSINDVLLTAGIPALPFGGVKDSGGGRRHGAEG 441 (453)
T ss_pred eeEEEeeCCHHHHHHHHhCCCCCCeEEEEcCCHHHHHHHHHhCCeeeEEECCCCCCCCCCCCCCCCcccccCCccChHHH
Confidence 9999999999999999999999999999999999999999999999999998854 45789999999999999999999
Q ss_pred HHhhheeeEEE
Q 015042 395 LYKYLQIKSVV 405 (414)
Q Consensus 395 ~~~~~~~k~i~ 405 (414)
+++||++|+++
T Consensus 442 ~~~~t~~k~v~ 452 (453)
T cd07099 442 LREFCRPKAIA 452 (453)
T ss_pred HHHhcceEEEe
Confidence 99999999986
|
4,4'-diapolycopene-dialdehyde dehydrogenase-like. The 4,4'-diapolycopene-dialdehyde dehydrogenase (DDALDH) involved in C30 carotenoid synthesis in Methylomonas sp. strain 16a and other similar sequences are present in this CD. DDALDH converts 4,4'-diapolycopene-dialdehyde into 4,4'-diapolycopene-diacid. |
| >cd07104 ALDH_BenzADH-like ALDH subfamily: NAD(P)+-dependent benzaldehyde dehydrogenase II, vanillin dehydrogenase, p-hydroxybenzaldehyde dehydrogenase and related proteins | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-84 Score=655.76 Aligned_cols=400 Identities=41% Similarity=0.672 Sum_probs=377.2
Q ss_pred CHHHHHHHHHhHHHHHHHHHHhcCCChHHHhhchHHHHHHHHHHHHHhhhhhcCcccccC-CCcccceeecCCceEEEEc
Q 015042 1 MWKFADLIEEHVEELAALDALDAGKVYLRAKTAEIPGAAEFLRFFAGAADKIHGEVLKMS-SELQGYTLREPVGVVGHII 79 (414)
Q Consensus 1 L~~~a~~l~~~~~~l~~~~~~etGk~~~e~~~~ei~~~~~~l~~~a~~~~~~~~~~~~~~-~~~~~~~~~~P~Gvv~~i~ 79 (414)
|+++++.|++|+++|++++++|+||+..+. ..|+..+++.+++++....+..+...+.. .+...+.+++|+|||++|+
T Consensus 28 L~~~a~~l~~~~~ela~~~~~e~Gk~~~~~-~~ei~~~~~~l~~~~~~~~~~~~~~~~~~~~g~~~~~~~~P~GVv~~i~ 106 (431)
T cd07104 28 LRKAAEILEERRDEIADWLIRESGSTRPKA-AFEVGAAIAILREAAGLPRRPEGEILPSDVPGKESMVRRVPLGVVGVIS 106 (431)
T ss_pred HHHHHHHHHHhHHHHHHHHHHHcCCCHHHH-HHHHHHHHHHHHHHHHHHHHhcCccccCCCCCceeEEEEeeeeeEEEEC
Confidence 578999999999999999999999999875 45999999999999988766555444433 4556789999999999999
Q ss_pred CCccchHHHHHhHHHHHhhCCeEEeecCCCChHH-HHHHHHHHHHcCCCCCcEEEEeCCchhhHHHhhhCCCccEEEEeC
Q 015042 80 PWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLT-ALYYAHLAKLAGIPDGVLNVVPGFGPTAGAAICSHMDIDYVCFTG 158 (414)
Q Consensus 80 p~n~P~~~~~~~~~~aLaaGN~vv~kps~~~~~~-~~~l~~~l~~aG~p~g~v~~v~~~~~~~~~~l~~~~~v~~v~~tG 158 (414)
|||||+...++++++||++||+||+|||+.+|.+ +..+.+++.++|+|+|+++++++++.+.++.|+.|+++|.|.|||
T Consensus 107 p~N~P~~~~~~~~~~ALaaGN~Vi~Kps~~~p~~~~~~l~~~l~~aGlP~gvv~~v~g~~~~~~~~L~~~~~i~~V~ftG 186 (431)
T cd07104 107 PFNFPLILAMRSVAPALALGNAVVLKPDSRTPVTGGLLIAEIFEEAGLPKGVLNVVPGGGSEIGDALVEHPRVRMISFTG 186 (431)
T ss_pred CCCcHHHHHHHHHHHHHHcCCeEEeeCCCCChHHHHHHHHHHHHHcCCCcccEEEeeCCchhHHHHHhcCCCCCEEEEEC
Confidence 9999999999999999999999999999999998 568999999999999999999997777899999999999999999
Q ss_pred CcHHHHHHHHHHHhcccceeEEEcCCCCCceEcCCCCHHHHHHHHHHHhhccCCCCcccCceEEEeCchHHHHHHHHHHH
Q 015042 159 STDVGRLVMQAAAASNLKQVSLELGGKSPLLIFDDADLDTAADVALLGNLYNKGEICVASSRVFVQEGIYDKFEKKLLEK 238 (414)
Q Consensus 159 s~~~g~~i~~~~a~~~~~~~~~e~gg~~~~iV~~dadl~~aa~~i~~~~~~~~Gq~C~a~~~i~V~~~i~d~f~~~l~~~ 238 (414)
|+.+|+.|++.++ ++++|+++|+|||||+||++|||++.|++.+++++|.|+||.|+++++||||++++|+|+++|++.
T Consensus 187 s~~~g~~v~~~aa-~~~~~~~lelgG~~~~iV~~dadl~~aa~~i~~~~~~~~GQ~C~a~~~v~v~~~i~~~f~~~l~~~ 265 (431)
T cd07104 187 STAVGRHIGELAG-RHLKKVALELGGNNPLIVLDDADLDLAVSAAAFGAFLHQGQICMAAGRILVHESVYDEFVEKLVAK 265 (431)
T ss_pred CHHHHHHHHHHHh-hcCCcEEEEcCCCCeEEECCCCCHHHHHHHHHHHHHhcCCCCcccCcEEEEcHHHHHHHHHHHHHH
Confidence 9999999999988 899999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhhcccCCCCCCCCcccccCCHHHHHHHHHHHHHHHHcCCEEEeCCcccCCCCceeeeEEEeeCCCcccccccceecceE
Q 015042 239 AKAWLVGDPFDPTVRQGPQISERHFDRILSYIEHGKREGATLLTGGKPIGDKGYYIEPTIFTNVKEDMIIAKEEIFGPVM 318 (414)
Q Consensus 239 ~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl 318 (414)
++.+++|+|.++++.+||++++.+++++.+++++++.+|+++++||.. .|+|++|||+.++++++.+++||+||||+
T Consensus 266 ~~~~~~g~~~~~~~~~gp~i~~~~~~~i~~~i~~a~~~G~~~~~gg~~---~g~~~~Ptvl~~~~~~~~~~~eE~fgPvl 342 (431)
T cd07104 266 AKALPVGDPRDPDTVIGPLINERQVDRVHAIVEDAVAAGARLLTGGTY---EGLFYQPTVLSDVTPDMPIFREEIFGPVA 342 (431)
T ss_pred HHhcCcCCCCCCCCccCcccCHHHHHHHHHHHHHHHHCCCEEEeCCCC---CCceECCEEeecCCCCChhhhCcCcCCeE
Confidence 999999999999999999999999999999999999999999999865 58999999999999999999999999999
Q ss_pred EEEeeCCHHHHHHHhhcCCCCceEEEecCCHHHHHHHHHhcceeEEEEcCcCCCC-CCCCcccCCCCCCCccchHHHHHh
Q 015042 319 ALMKFKTVEEAIKSANNTQYGLAAGIVTKDLNVANTVSRSIRAGIIWINCYFGFS-MDCPYGGYKMSGFGREYGLESLYK 397 (414)
Q Consensus 319 ~v~~~~~~~eai~~~n~~~~gl~~sv~s~d~~~~~~~~~~l~~g~v~iN~~~~~~-~~~p~gG~~~sG~g~~~g~~~~~~ 397 (414)
+|++|+|+||||+++|++++||++||||+|.+.++++++++++|+|+||++.... +.+||||+|.||+|+++|++|+++
T Consensus 343 ~v~~~~~~~eai~~~n~~~~gl~~~i~t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~~pfgG~~~SG~g~~~g~~~l~~ 422 (431)
T cd07104 343 PVIPFDDDEEAVELANDTEYGLSAAVFTRDLERAMAFAERLETGMVHINDQTVNDEPHVPFGGVKASGGGRFGGPASLEE 422 (431)
T ss_pred EEEEECCHHHHHHHHhCCCCCceEEEEcCCHHHHHHHHHhcCcCeEEECCCCCCCCCCCCCCCcccccCCccchHHHHHH
Confidence 9999999999999999999999999999999999999999999999999987644 689999999999999999999999
Q ss_pred hheeeEEE
Q 015042 398 YLQIKSVV 405 (414)
Q Consensus 398 ~~~~k~i~ 405 (414)
||+.|+++
T Consensus 423 ~~~~k~~~ 430 (431)
T cd07104 423 FTEWQWIT 430 (431)
T ss_pred hhceeEEe
Confidence 99999985
|
ALDH subfamily which includes the NAD(P)+-dependent, benzaldehyde dehydrogenase II (XylC, BenzADH, EC=1.2.1.28) involved in the oxidation of benzyl alcohol to benzoate; p-hydroxybenzaldehyde dehydrogenase (PchA, HBenzADH) which catalyzes the oxidation of p-hydroxybenzaldehyde to p-hydroxybenzoic acid; vanillin dehydrogenase (Vdh, VaniDH) involved in the metabolism of ferulic acid as seen in Pseudomonas putida KT2440; and other related sequences. |
| >cd07147 ALDH_F21_RNP123 Aldehyde dehydrogenase family 21A1-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-84 Score=658.37 Aligned_cols=398 Identities=37% Similarity=0.605 Sum_probs=371.6
Q ss_pred CHHHHHHHHHhHHHHHHHHHHhcCCChHHHhhchHHHHHHHHHHHHHhhhhhcCcccccC-----CCcccceeecCCceE
Q 015042 1 MWKFADLIEEHVEELAALDALDAGKVYLRAKTAEIPGAAEFLRFFAGAADKIHGEVLKMS-----SELQGYTLREPVGVV 75 (414)
Q Consensus 1 L~~~a~~l~~~~~~l~~~~~~etGk~~~e~~~~ei~~~~~~l~~~a~~~~~~~~~~~~~~-----~~~~~~~~~~P~Gvv 75 (414)
|+++++.|++|+++|++++++|+|||..++. .|+..+++.+++++..+.+..++..+.. .+...+.+++|+|||
T Consensus 49 L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~-~ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv 127 (452)
T cd07147 49 LLHCVARLEERFEELAETIVLEAGKPIKDAR-GEVARAIDTFRIAAEEATRIYGEVLPLDISARGEGRQGLVRRFPIGPV 127 (452)
T ss_pred HHHHHHHHHHhHHHHHHHHHHHcCCCHHHHH-HHHHHHHHHHHHHHHHHHHhCCcccccccccCCCCceeEEEEeceeEE
Confidence 5789999999999999999999999998764 5999999999999987765544432211 234567889999999
Q ss_pred EEEcCCccchHHHHHhHHHHHhhCCeEEeecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhhHHHhhhCCCccEEE
Q 015042 76 GHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLTALYYAHLAKLAGIPDGVLNVVPGFGPTAGAAICSHMDIDYVC 155 (414)
Q Consensus 76 ~~i~p~n~P~~~~~~~~~~aLaaGN~vv~kps~~~~~~~~~l~~~l~~aG~p~g~v~~v~~~~~~~~~~l~~~~~v~~v~ 155 (414)
++|+|||||+...++++++||++||+||+|||+.+|.++..+.++|.++|+|+|+|++++++ .+.++.|+.||++|.|.
T Consensus 128 ~~I~p~N~P~~~~~~~~~~ALaaGN~VIlKps~~~p~~~~~l~~~l~~ag~P~g~v~~v~g~-~~~~~~l~~~~~v~~v~ 206 (452)
T cd07147 128 SAITPFNFPLNLVAHKVAPAIAAGCPFVLKPASRTPLSALILGEVLAETGLPKGAFSVLPCS-RDDADLLVTDERIKLLS 206 (452)
T ss_pred EEEcCCCcHHHHHHHHHHHHHHcCCEEEEECCCCCcHHHHHHHHHHHHcCCCcCcEEEEeCC-ccchhHHhcCCCCCEEE
Confidence 99999999999999999999999999999999999999999999999999999999999984 56789999999999999
Q ss_pred EeCCcHHHHHHHHHHHhcccceeEEEcCCCCCceEcCCCCHHHHHHHHHHHhhccCCCCcccCceEEEeCchHHHHHHHH
Q 015042 156 FTGSTDVGRLVMQAAAASNLKQVSLELGGKSPLLIFDDADLDTAADVALLGNLYNKGEICVASSRVFVQEGIYDKFEKKL 235 (414)
Q Consensus 156 ~tGs~~~g~~i~~~~a~~~~~~~~~e~gg~~~~iV~~dadl~~aa~~i~~~~~~~~Gq~C~a~~~i~V~~~i~d~f~~~l 235 (414)
||||..+|+.|.+.++ .+|+++|+|||||+||++|||++.|++.+++++|.|+||.|+++++||||++++|+|+++|
T Consensus 207 fTGs~~~g~~v~~~a~---~~~v~lelgG~~p~iV~~dadl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~L 283 (452)
T cd07147 207 FTGSPAVGWDLKARAG---KKKVVLELGGNAAVIVDSDADLDFAAQRIIFGAFYQAGQSCISVQRVLVHRSVYDEFKSRL 283 (452)
T ss_pred EECCHHHHHHHHHHhC---cCceEeecCCCCcEEECCCCCHHHHHHHHHHHHHhccCCCCcCCcEEEEchhHHHHHHHHH
Confidence 9999999999998765 3699999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhhcccCCCCCCCCcccccCCHHHHHHHHHHHHHHHHcCCEEEeCCcccCCCCceeeeEEEeeCCCcccccccceec
Q 015042 236 LEKAKAWLVGDPFDPTVRQGPQISERHFDRILSYIEHGKREGATLLTGGKPIGDKGYYIEPTIFTNVKEDMIIAKEEIFG 315 (414)
Q Consensus 236 ~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fg 315 (414)
++.++++++|+|.++++.+||+++..+++++++++++++++|+++++||.. .|+|++|||+.+++++|+++++|+||
T Consensus 284 ~~~~~~~~~g~p~~~~~~~gpli~~~~~~~~~~~i~~a~~~Ga~~l~gg~~---~g~~~~Ptvl~~~~~~~~~~~~E~fg 360 (452)
T cd07147 284 VARVKALKTGDPKDDATDVGPMISESEAERVEGWVNEAVDAGAKLLTGGKR---DGALLEPTILEDVPPDMEVNCEEVFG 360 (452)
T ss_pred HHHHHhCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCEEEecCCc---CCEEEcCEEEeCCCCCChHHhCcCcC
Confidence 999999999999999999999999999999999999999999999999875 58999999999999999999999999
Q ss_pred ceEEEEeeCCHHHHHHHhhcCCCCceEEEecCCHHHHHHHHHhcceeEEEEcCcCCC-CCCCCcccCCCCCCCccchHHH
Q 015042 316 PVMALMKFKTVEEAIKSANNTQYGLAAGIVTKDLNVANTVSRSIRAGIIWINCYFGF-SMDCPYGGYKMSGFGREYGLES 394 (414)
Q Consensus 316 Pvl~v~~~~~~~eai~~~n~~~~gl~~sv~s~d~~~~~~~~~~l~~g~v~iN~~~~~-~~~~p~gG~~~sG~g~~~g~~~ 394 (414)
||++|++|+|+||||+++|+++|||++||||+|.++++++++++++|+|+||+.+.. .+.+||||+|+||+|+++|++|
T Consensus 361 Pvl~v~~~~~~deai~~~n~~~~gL~~~v~t~d~~~a~~~~~~~~~G~v~vN~~~~~~~~~~pfGG~~~SG~G~~~g~~~ 440 (452)
T cd07147 361 PVVTVEPYDDFDEALAAVNDSKFGLQAGVFTRDLEKALRAWDELEVGGVVINDVPTFRVDHMPYGGVKDSGIGREGVRYA 440 (452)
T ss_pred CeEEEEEeCCHHHHHHHHhCCCCCceEEEECCCHHHHHHHHHHcCcceEEECCCCCCCCCCCCcCCccccccCCCChHHH
Confidence 999999999999999999999999999999999999999999999999999987654 4678999999999999999999
Q ss_pred HHhhheeeEEEe
Q 015042 395 LYKYLQIKSVVT 406 (414)
Q Consensus 395 ~~~~~~~k~i~~ 406 (414)
+++||+.|+|++
T Consensus 441 ~~~~~~~k~i~~ 452 (452)
T cd07147 441 IEEMTEPRLLVI 452 (452)
T ss_pred HHHhcceeEEeC
Confidence 999999999863
|
Aldehyde dehydrogenase ALDH21A1 (gene name RNP123) was first described in the moss Tortula ruralis and is believed to play an important role in the detoxification of aldehydes generated in response to desiccation- and salinity-stress, and ALDH21A1 expression represents a unique stress tolerance mechanism. So far, of plants, only the bryophyte sequence has been observed, but similar protein sequences from bacteria and archaea are also present in this CD. |
| >cd07137 ALDH_F3FHI Plant aldehyde dehydrogenase family 3 members F1, H1, and I1 and related proteins | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-84 Score=651.12 Aligned_cols=398 Identities=28% Similarity=0.418 Sum_probs=367.8
Q ss_pred CHHHHHHHHHhHHHHHHHHHHhcCCChHHHhhchHHHHHHHHHHHHHhhhhhcCcc---ccc-CCCcccceeecCCceEE
Q 015042 1 MWKFADLIEEHVEELAALDALDAGKVYLRAKTAEIPGAAEFLRFFAGAADKIHGEV---LKM-SSELQGYTLREPVGVVG 76 (414)
Q Consensus 1 L~~~a~~l~~~~~~l~~~~~~etGk~~~e~~~~ei~~~~~~l~~~a~~~~~~~~~~---~~~-~~~~~~~~~~~P~Gvv~ 76 (414)
|++++++|++|+++|++++++|+|||..+....|+..+++.+++++....+..+.. .+. ......+++++|+|||+
T Consensus 27 L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~~ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~P~GVv~ 106 (432)
T cd07137 27 LKGLLRLVDENEDDIFAALRQDLGKPSAESFRDEVSVLVSSCKLAIKELKKWMAPEKVKTPLTTFPAKAEIVSEPLGVVL 106 (432)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhCCcccCCCcccCCceeEEEEecCcEEE
Confidence 67899999999999999999999999987655699999999999998775543321 111 12235678999999999
Q ss_pred EEcCCccchHHHHHhHHHHHhhCCeEEeecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhhHHHhhhCCCccEEEE
Q 015042 77 HIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLTALYYAHLAKLAGIPDGVLNVVPGFGPTAGAAICSHMDIDYVCF 156 (414)
Q Consensus 77 ~i~p~n~P~~~~~~~~~~aLaaGN~vv~kps~~~~~~~~~l~~~l~~aG~p~g~v~~v~~~~~~~~~~l~~~~~v~~v~~ 156 (414)
+|+|||||+...++++++||++||+||+|||+.+|.++..+.++|.++ +|+|++|++++ +.+.++.|+.| ++|.|.|
T Consensus 107 ~I~p~N~P~~~~~~~~~~ALaaGN~VvlKps~~tp~~~~~l~~~~~~~-~P~gvv~~v~g-~~~~~~~L~~~-~i~~v~f 183 (432)
T cd07137 107 VISAWNFPFLLSLEPVIGAIAAGNAVVLKPSELAPATSALLAKLIPEY-LDTKAIKVIEG-GVPETTALLEQ-KWDKIFF 183 (432)
T ss_pred EEcCCchHHHHHHHHHHHHHhcCCEEEEECCCcChHHHHHHHHHHHHh-CCcCeEEEEeC-CHHHHHHHHhC-CCCEEEE
Confidence 999999999999999999999999999999999999999999999995 99999999998 66678889887 5999999
Q ss_pred eCCcHHHHHHHHHHHhcccceeEEEcCCCCCceEcCCCCHHHHHHHHHHHhh-ccCCCCcccCceEEEeCchHHHHHHHH
Q 015042 157 TGSTDVGRLVMQAAAASNLKQVSLELGGKSPLLIFDDADLDTAADVALLGNL-YNKGEICVASSRVFVQEGIYDKFEKKL 235 (414)
Q Consensus 157 tGs~~~g~~i~~~~a~~~~~~~~~e~gg~~~~iV~~dadl~~aa~~i~~~~~-~~~Gq~C~a~~~i~V~~~i~d~f~~~l 235 (414)
|||+.+|+.|.+.++ .+++|+++|+|||||+||++|||++.|++.+++++| +|+||.|++++|+|||++++|+|+++|
T Consensus 184 TGs~~~g~~v~~~aa-~~~~~~~lElgG~np~iV~~dAdl~~aa~~i~~~~f~~~~GQ~C~a~~rv~V~~~i~d~f~~~l 262 (432)
T cd07137 184 TGSPRVGRIIMAAAA-KHLTPVTLELGGKCPVIVDSTVDLKVAVRRIAGGKWGCNNGQACIAPDYVLVEESFAPTLIDAL 262 (432)
T ss_pred ECChHHHHHHHHHHH-hcCCcEEEEccCCCcEEEcCCCCHHHHHHHHHHHhhhccCCCcccCCCEEEEcHHHHHHHHHHH
Confidence 999999999999987 889999999999999999999999999999999999 599999999999999999999999999
Q ss_pred HHHHhhcccCCCCCCCCcccccCCHHHHHHHHHHHHHHHHcCCEEEeCCcccCCCCceeeeEEEeeCCCcccccccceec
Q 015042 236 LEKAKAWLVGDPFDPTVRQGPQISERHFDRILSYIEHGKREGATLLTGGKPIGDKGYYIEPTIFTNVKEDMIIAKEEIFG 315 (414)
Q Consensus 236 ~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fg 315 (414)
++.++++++|+| ++++++||++++.+++++.+++++++. |+++++||... .+|+|+.|||+.+++++|.+++||+||
T Consensus 263 ~~~~~~~~~g~p-~~~~~~gpli~~~~~~~v~~~i~~a~~-ga~~l~gg~~~-~~g~~~~Ptvl~~~~~~~~~~~eE~Fg 339 (432)
T cd07137 263 KNTLEKFFGENP-KESKDLSRIVNSHHFQRLSRLLDDPSV-ADKIVHGGERD-EKNLYIEPTILLDPPLDSSIMTEEIFG 339 (432)
T ss_pred HHHHHHHhCCCC-CccCCcCCcCCHHHHHHHHHHHHHHHh-CCeEEeCCCcC-CCCCEEeeEEEecCCCcchhhhccccc
Confidence 999999999999 468899999999999999999999998 89999998763 368999999999999999999999999
Q ss_pred ceEEEEeeCCHHHHHHHhhcCCCCceEEEecCCHHHHHHHHHhcceeEEEEcCcCC--CCCCCCcccCCCCCCCccchHH
Q 015042 316 PVMALMKFKTVEEAIKSANNTQYGLAAGIVTKDLNVANTVSRSIRAGIIWINCYFG--FSMDCPYGGYKMSGFGREYGLE 393 (414)
Q Consensus 316 Pvl~v~~~~~~~eai~~~n~~~~gl~~sv~s~d~~~~~~~~~~l~~g~v~iN~~~~--~~~~~p~gG~~~sG~g~~~g~~ 393 (414)
||++|++|+|+||||+++|+++|||++||||+|.+.++++++++++|.|+||++.. ..+.+||||+|.||+|+++|.+
T Consensus 340 Pvl~v~~~~~~deai~~~N~~~~gL~a~v~t~d~~~a~~~~~~l~~G~v~iN~~~~~~~~~~~PfGG~k~SG~G~~~g~~ 419 (432)
T cd07137 340 PLLPIITVKKIEESIEIINSRPKPLAAYVFTKNKELKRRIVAETSSGGVTFNDTVVQYAIDTLPFGGVGESGFGAYHGKF 419 (432)
T ss_pred CceEEEEeCCHHHHHHHHhcCCCCcEEEEECCCHHHHHHHHHhCCcCcEEECCccccccCCCCCCCCcCcCcCCccccHH
Confidence 99999999999999999999999999999999999999999999999999998765 3477999999999999999999
Q ss_pred HHHhhheeeEEE
Q 015042 394 SLYKYLQIKSVV 405 (414)
Q Consensus 394 ~~~~~~~~k~i~ 405 (414)
++++|+++|+|+
T Consensus 420 ~l~~f~~~k~v~ 431 (432)
T cd07137 420 SFDAFSHKKAVL 431 (432)
T ss_pred HHHHhccCceee
Confidence 999999999985
|
Aldehyde dehydrogenase family members 3F1, 3H1, and 3I1 (ALDH3F1, ALDH3H1, and ALDH3I1), and similar plant sequences, are in this CD. In Arabidopsis thaliana, stress-regulated expression of ALDH3I1 was observed in leaves and osmotic stress expression of ALDH3H1 was observed in root tissue, whereas, ALDH3F1 expression was not stress responsive. Functional analysis of ALDH3I1 suggest it may be involved in a detoxification pathway in plants that limits aldehyde accumulation and oxidative stress. |
| >cd07093 ALDH_F8_HMSADH Human aldehyde dehydrogenase family 8 member A1-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.3e-84 Score=657.69 Aligned_cols=404 Identities=50% Similarity=0.833 Sum_probs=381.5
Q ss_pred CHHHHHHHHHhHHHHHHHHHHhcCCChHHHhhchHHHHHHHHHHHHHhhhhhcCcccccCCCcccceeecCCceEEEEcC
Q 015042 1 MWKFADLIEEHVEELAALDALDAGKVYLRAKTAEIPGAAEFLRFFAGAADKIHGEVLKMSSELQGYTLREPVGVVGHIIP 80 (414)
Q Consensus 1 L~~~a~~l~~~~~~l~~~~~~etGk~~~e~~~~ei~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p 80 (414)
|+++++.|.+++++|++++++|+||+..++...|+..+++.++++++...+..+...+...+...+.+++|+|||++|+|
T Consensus 47 L~~~a~~l~~~~~ela~~~~~e~Gk~~~~~~~~ev~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p 126 (455)
T cd07093 47 LHKVADLIEARADELALLESLDTGKPITLARTRDIPRAAANFRFFADYILQLDGESYPQDGGALNYVLRQPVGVAGLITP 126 (455)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHhHHHhCCccccCCCCceEEEEEEeeeEEEEECC
Confidence 57899999999999999999999999988766799999999999998776654443333345567889999999999999
Q ss_pred CccchHHHHHhHHHHHhhCCeEEeecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhhHHHhhhCCCccEEEEeCCc
Q 015042 81 WNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLTALYYAHLAKLAGIPDGVLNVVPGFGPTAGAAICSHMDIDYVCFTGST 160 (414)
Q Consensus 81 ~n~P~~~~~~~~~~aLaaGN~vv~kps~~~~~~~~~l~~~l~~aG~p~g~v~~v~~~~~~~~~~l~~~~~v~~v~~tGs~ 160 (414)
||||+...++++++||++||+||+|||+.+|.++..+.++|.++|+|+|+|+++++++.+.++.|+.|+++|.|.||||.
T Consensus 127 ~N~P~~~~~~~~~~AL~aGN~VIlkps~~~p~~~~~l~~~l~~aglP~g~v~~v~g~~~~~~~~L~~~~~i~~V~ftGs~ 206 (455)
T cd07093 127 WNLPLMLLTWKIAPALAFGNTVVLKPSEWTPLTAWLLAELANEAGLPPGVVNVVHGFGPEAGAALVAHPDVDLISFTGET 206 (455)
T ss_pred CChHHHHHHHHHHHHHhcCCEEEeECCCcCcHHHHHHHHHHHhcCCCccceEEEecCchHHHHHHhcCCCccEEEEECCH
Confidence 99999999999999999999999999999999999999999999999999999998777889999999999999999999
Q ss_pred HHHHHHHHHHHhcccceeEEEcCCCCCceEcCCCCHHHHHHHHHHHhhccCCCCcccCceEEEeCchHHHHHHHHHHHHh
Q 015042 161 DVGRLVMQAAAASNLKQVSLELGGKSPLLIFDDADLDTAADVALLGNLYNKGEICVASSRVFVQEGIYDKFEKKLLEKAK 240 (414)
Q Consensus 161 ~~g~~i~~~~a~~~~~~~~~e~gg~~~~iV~~dadl~~aa~~i~~~~~~~~Gq~C~a~~~i~V~~~i~d~f~~~l~~~~~ 240 (414)
.+|+.|.+.++ ++++|+++|+||+||+||++|||++.|++.+++++|.++||.|+++++||||++++|+|+++|+++++
T Consensus 207 ~~g~~v~~~aa-~~~~~~~lelgG~~~~iV~~dAdl~~a~~~i~~~~~~~~GQ~C~a~~~v~v~~~i~d~f~~~l~~~~~ 285 (455)
T cd07093 207 ATGRTIMRAAA-PNLKPVSLELGGKNPNIVFADADLDRAVDAAVRSSFSNNGEVCLAGSRILVQRSIYDEFLERFVERAK 285 (455)
T ss_pred HHHHHHHHHHh-hcccceEeecCCCCceEECCCCCHHHHHHHHHHHHHhccCCCcCCCceEEEcHHHHHHHHHHHHHHHH
Confidence 99999999988 88999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hcccCCCCCCCCcccccCCHHHHHHHHHHHHHHHHcCCEEEeCCcccC----CCCceeeeEEEeeCCCcccccccceecc
Q 015042 241 AWLVGDPFDPTVRQGPQISERHFDRILSYIEHGKREGATLLTGGKPIG----DKGYYIEPTIFTNVKEDMIIAKEEIFGP 316 (414)
Q Consensus 241 ~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~----~~g~~~~Ptvl~~~~~~~~~~~~E~fgP 316 (414)
++++|+|.++++++||+++..+++++.+++++++.+|+++++||.... ..|+|+.|||+.++++++++++||+|||
T Consensus 286 ~~~~g~p~~~~~~~gpli~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~~~~~~~~~~~~Ptvl~~~~~~~~~~~~E~fgP 365 (455)
T cd07093 286 ALKVGDPLDPDTEVGPLISKEHLEKVLGYVELARAEGATILTGGGRPELPDLEGGYFVEPTVITGLDNDSRVAQEEIFGP 365 (455)
T ss_pred hCCCCCCCCCCCCcCCCcCHHHHHHHHHHHHHHHHCCCEEEeCCCccccccCCCCceECCEEEecCCCCChHHhCCCCCc
Confidence 999999999999999999999999999999999999999999997643 3589999999999999999999999999
Q ss_pred eEEEEeeCCHHHHHHHhhcCCCCceEEEecCCHHHHHHHHHhcceeEEEEcCcCCCCCCCCcccCCCCCCCccchHHHHH
Q 015042 317 VMALMKFKTVEEAIKSANNTQYGLAAGIVTKDLNVANTVSRSIRAGIIWINCYFGFSMDCPYGGYKMSGFGREYGLESLY 396 (414)
Q Consensus 317 vl~v~~~~~~~eai~~~n~~~~gl~~sv~s~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~p~gG~~~sG~g~~~g~~~~~ 396 (414)
|++|++|+|.+||++++|++++||++||||+|.+.++++++++++|+|+||++....+.+||||+|.||+|+++|++|++
T Consensus 366 vl~v~~~~~~~eai~~~n~~~~gls~~i~t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~pfgG~~~SG~G~~~g~~~~~ 445 (455)
T cd07093 366 VVTVIPFDDEEEAIELANDTPYGLAAYVWTRDLGRAHRVARRLEAGTVWVNCWLVRDLRTPFGGVKASGIGREGGDYSLE 445 (455)
T ss_pred eEEEEeeCCHHHHHHHHhCCCCCceEEEECCCHHHHHHHHHhCCcceEEECCCCCCCCCCCcCCCccCcCCCCchHHHHH
Confidence 99999999999999999999999999999999999999999999999999998877778999999999999999999999
Q ss_pred hhheeeEEE
Q 015042 397 KYLQIKSVV 405 (414)
Q Consensus 397 ~~~~~k~i~ 405 (414)
+|++.|+++
T Consensus 446 ~~~~~k~~~ 454 (455)
T cd07093 446 FYTELKNVC 454 (455)
T ss_pred HHhceeEEe
Confidence 999999985
|
In humans, the aldehyde dehydrogenase family 8 member A1 (ALDH8A1) protein functions to convert 9-cis-retinal to 9-cis-retinoic acid and has a preference for NAD+. Also included in this CD is the 2-hydroxymuconic semialdehyde dehydrogenase (HMSADH) which catalyzes the conversion of 2-hydroxymuconic semialdehyde to 4-oxalocrotonate, a step in the meta cleavage pathway of aromatic hydrocarbons in bacteria. Such HMSADHs seen here are: XylG of the TOL plasmid pWW0 of Pseudomonas putida, TomC of Burkholderia cepacia G4, and AphC of Comamonas testosterone. |
| >cd07136 ALDH_YwdH-P39616 Bacillus subtilis aldehyde dehydrogenase ywdH-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-84 Score=651.74 Aligned_cols=396 Identities=33% Similarity=0.492 Sum_probs=367.5
Q ss_pred CHHHHHHHHHhHHHHHHHHHHhcCCChHHHhhchHHHHHHHHHHHHHhhhhhcCc-ccccC---CCcccceeecCCceEE
Q 015042 1 MWKFADLIEEHVEELAALDALDAGKVYLRAKTAEIPGAAEFLRFFAGAADKIHGE-VLKMS---SELQGYTLREPVGVVG 76 (414)
Q Consensus 1 L~~~a~~l~~~~~~l~~~~~~etGk~~~e~~~~ei~~~~~~l~~~a~~~~~~~~~-~~~~~---~~~~~~~~~~P~Gvv~ 76 (414)
|+++++.|++|+++|++++++|+|||..++...|+..+++.+++++..++...+. ..+.. .+...+.+++|+|||+
T Consensus 26 L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a~~~ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~ 105 (449)
T cd07136 26 LKKLKQAIKKYENEILEALKKDLGKSEFEAYMTEIGFVLSEINYAIKHLKKWMKPKRVKTPLLNFPSKSYIYYEPYGVVL 105 (449)
T ss_pred HHHHHHHHHHhHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCccCCccccCCceeEEEEecCeEEE
Confidence 5789999999999999999999999999876669999999999999887665433 22211 2446788999999999
Q ss_pred EEcCCccchHHHHHhHHHHHhhCCeEEeecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhhHHHhhhCCCccEEEE
Q 015042 77 HIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLTALYYAHLAKLAGIPDGVLNVVPGFGPTAGAAICSHMDIDYVCF 156 (414)
Q Consensus 77 ~i~p~n~P~~~~~~~~~~aLaaGN~vv~kps~~~~~~~~~l~~~l~~aG~p~g~v~~v~~~~~~~~~~l~~~~~v~~v~~ 156 (414)
+|+|||||++..++++++||++||+||+|||+.+|.++..+.+++.++ +|+|++|++++ +.+.+..|+.|+ +|.|.|
T Consensus 106 ~i~p~N~P~~~~~~~~~~ALaaGN~vi~Kps~~tp~~~~~l~~~~~~a-lP~gv~~~v~g-~~~~~~~L~~~~-v~~V~f 182 (449)
T cd07136 106 IIAPWNYPFQLALAPLIGAIAAGNTAVLKPSELTPNTSKVIAKIIEET-FDEEYVAVVEG-GVEENQELLDQK-FDYIFF 182 (449)
T ss_pred EECCCchHHHHHHHHHHHHHhcCCEEEEECcccchHHHHHHHHHHHHh-CCCCEEEEEeC-ChHHHHHHhcCC-CCEEEE
Confidence 999999999999999999999999999999999999999999999998 99999999998 556788888775 999999
Q ss_pred eCCcHHHHHHHHHHHhcccceeEEEcCCCCCceEcCCCCHHHHHHHHHHHhhccCCCCcccCceEEEeCchHHHHHHHHH
Q 015042 157 TGSTDVGRLVMQAAAASNLKQVSLELGGKSPLLIFDDADLDTAADVALLGNLYNKGEICVASSRVFVQEGIYDKFEKKLL 236 (414)
Q Consensus 157 tGs~~~g~~i~~~~a~~~~~~~~~e~gg~~~~iV~~dadl~~aa~~i~~~~~~~~Gq~C~a~~~i~V~~~i~d~f~~~l~ 236 (414)
|||+.+|+.|++.++ +.++|+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|+|||++++|+|+++|+
T Consensus 183 TGS~~~g~~i~~~aa-~~~~~v~lElgGknp~iV~~dADld~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~d~f~~~L~ 261 (449)
T cd07136 183 TGSVRVGKIVMEAAA-KHLTPVTLELGGKSPCIVDEDANLKLAAKRIVWGKFLNAGQTCVAPDYVLVHESVKEKFIKELK 261 (449)
T ss_pred ECCHHHHHHHHHHHH-hcCCCEEEEecCCCeEEECCCCCHHHHHHHHHHHHHcccCCcccCCCEEEEcHHHHHHHHHHHH
Confidence 999999999999988 7899999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhhcccCCCCCCCCcccccCCHHHHHHHHHHHHHHHHcCCEEEeCCcccCCCCceeeeEEEeeCCCcccccccceecc
Q 015042 237 EKAKAWLVGDPFDPTVRQGPQISERHFDRILSYIEHGKREGATLLTGGKPIGDKGYYIEPTIFTNVKEDMIIAKEEIFGP 316 (414)
Q Consensus 237 ~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgP 316 (414)
+.++++++|+|.+ .+++||++++.++++++++++++ ++++||... .+|+|+.|||+.+++++|.+++||+|||
T Consensus 262 ~~~~~~~~g~p~~-~~~~gpli~~~~~~~i~~~i~~a-----~~~~gG~~~-~~g~~~~Ptvl~~v~~~~~~~~eE~FGP 334 (449)
T cd07136 262 EEIKKFYGEDPLE-SPDYGRIINEKHFDRLAGLLDNG-----KIVFGGNTD-RETLYIEPTILDNVTWDDPVMQEEIFGP 334 (449)
T ss_pred HHHHHhcCCCCCC-CCCccCcCCHHHHHHHHHHHhcc-----eEEECCCcC-CCCCEEeeEEEecCCCcChHHhccccCC
Confidence 9999999999987 88999999999999999999764 899999763 3689999999999999999999999999
Q ss_pred eEEEEeeCCHHHHHHHhhcCCCCceEEEecCCHHHHHHHHHhcceeEEEEcCcCC--CCCCCCcccCCCCCCCccchHHH
Q 015042 317 VMALMKFKTVEEAIKSANNTQYGLAAGIVTKDLNVANTVSRSIRAGIIWINCYFG--FSMDCPYGGYKMSGFGREYGLES 394 (414)
Q Consensus 317 vl~v~~~~~~~eai~~~n~~~~gl~~sv~s~d~~~~~~~~~~l~~g~v~iN~~~~--~~~~~p~gG~~~sG~g~~~g~~~ 394 (414)
|++|++|+|+||||+++|+++|||++||||+|.+.++++++++++|.|+||+... ..+.+||||+|.||+|+++|.++
T Consensus 335 Vl~v~~~~~~~eai~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~~G~v~vN~~~~~~~~~~~PfGG~k~SG~G~~~g~~~ 414 (449)
T cd07136 335 ILPVLTYDTLDEAIEIIKSRPKPLALYLFSEDKKVEKKVLENLSFGGGCINDTIMHLANPYLPFGGVGNSGMGSYHGKYS 414 (449)
T ss_pred eeEEEEeCCHHHHHHHHhCCCCCceEEEECCCHHHHHHHHHhCCcceEEECCccccccCCCCCccCcCcccCCcccCHHH
Confidence 9999999999999999999999999999999999999999999999999998764 34789999999999999999999
Q ss_pred HHhhheeeEEEee
Q 015042 395 LYKYLQIKSVVTP 407 (414)
Q Consensus 395 ~~~~~~~k~i~~~ 407 (414)
+++||+.|+|+++
T Consensus 415 l~~~t~~k~v~~~ 427 (449)
T cd07136 415 FDTFSHKKSILKK 427 (449)
T ss_pred HHHhccceEEEEc
Confidence 9999999999876
|
Uncharacterized Bacillus subtilis ywdH aldehyde dehydrogenase (locus P39616) most closely related to the ALDHs and fatty ALDHs of families 3 and 14, and similar sequences, are included in this CD. |
| >cd07105 ALDH_SaliADH Salicylaldehyde dehydrogenase, DoxF-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.8e-84 Score=651.96 Aligned_cols=399 Identities=37% Similarity=0.551 Sum_probs=371.5
Q ss_pred CHHHHHHHHHhHHHHHHHHHHhcCCChHHHhhchHHHHHHHHHHHHHhhhhhcCcccccC-CCcccceeecCCceEEEEc
Q 015042 1 MWKFADLIEEHVEELAALDALDAGKVYLRAKTAEIPGAAEFLRFFAGAADKIHGEVLKMS-SELQGYTLREPVGVVGHII 79 (414)
Q Consensus 1 L~~~a~~l~~~~~~l~~~~~~etGk~~~e~~~~ei~~~~~~l~~~a~~~~~~~~~~~~~~-~~~~~~~~~~P~Gvv~~i~ 79 (414)
|+++++.|++|+++|++++++|+|||..+. ..|+..+++.++++++..++..+...+.. .+...+.+++|+|||++|+
T Consensus 28 L~~~a~~l~~~~~~la~~~~~e~Gk~~~~~-~~ei~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVV~~I~ 106 (432)
T cd07105 28 LLKAADLLESRRDEFIEAMMEETGATAAWA-GFNVDLAAGMLREAASLITQIIGGSIPSDKPGTLAMVVKEPVGVVLGIA 106 (432)
T ss_pred HHHHHHHHHhCHHHHHHHHHHHhCCCHHHH-HHHHHHHHHHHHHHHHHHHHhcCeecccCCCCceeEEEEecceEEEEEC
Confidence 578999999999999999999999998765 45999999999999988766544433322 3445688999999999999
Q ss_pred CCccchHHHHHhHHHHHhhCCeEEeecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCC---chhhHHHhhhCCCccEEEE
Q 015042 80 PWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLTALYYAHLAKLAGIPDGVLNVVPGF---GPTAGAAICSHMDIDYVCF 156 (414)
Q Consensus 80 p~n~P~~~~~~~~~~aLaaGN~vv~kps~~~~~~~~~l~~~l~~aG~p~g~v~~v~~~---~~~~~~~l~~~~~v~~v~~ 156 (414)
|||||+...++++++||++||+||+|||+.+|.++..+.+++.++|+|+|++|+++++ +.++++.|+.||++|.|.|
T Consensus 107 p~N~P~~~~~~~~~~ALaaGN~VVlKps~~~p~~~~~l~~~~~~aGlP~gv~~~v~g~~~~~~~~~~~l~~~~~v~~v~f 186 (432)
T cd07105 107 PWNAPVILGTRAIAYPLAAGNTVVLKASELSPRTHWLIGRVFHEAGLPKGVLNVVTHSPEDAPEVVEALIAHPAVRKVNF 186 (432)
T ss_pred CcCcHHHHHHHHHHHHHhcCCEEEEECCccChHHHHHHHHHHHHcCcCCCcEEEEeCCCCchHHHHHHHhcCCCCCEEEE
Confidence 9999999999999999999999999999999999999999999999999999999974 3457899999999999999
Q ss_pred eCCcHHHHHHHHHHHhcccceeEEEcCCCCCceEcCCCCHHHHHHHHHHHhhccCCCCcccCceEEEeCchHHHHHHHHH
Q 015042 157 TGSTDVGRLVMQAAAASNLKQVSLELGGKSPLLIFDDADLDTAADVALLGNLYNKGEICVASSRVFVQEGIYDKFEKKLL 236 (414)
Q Consensus 157 tGs~~~g~~i~~~~a~~~~~~~~~e~gg~~~~iV~~dadl~~aa~~i~~~~~~~~Gq~C~a~~~i~V~~~i~d~f~~~l~ 236 (414)
|||+.+|+.|.+.++ ++++|+++|+|||||+||++|||++.|++.+++++|.|+||.|++++++|||+++||+|+++|+
T Consensus 187 tGs~~~g~~i~~~aa-~~~~~~~lElgGk~p~iV~~dadl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~l~ 265 (432)
T cd07105 187 TGSTRVGRIIAETAA-KHLKPVLLELGGKAPAIVLEDADLDAAANAALFGAFLNSGQICMSTERIIVHESIADEFVEKLK 265 (432)
T ss_pred ECCHHHHHHHHHHHH-hcCCeEEEeCCCCCceEECCCCCHHHHHHHHHHHHHhcCCCCCcCCceEEEcHHHHHHHHHHHH
Confidence 999999999999988 8899999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhhcccCCCCCCCCcccccCCHHHHHHHHHHHHHHHHcCCEEEeCCcccC-CCCceeeeEEEeeCCCcccccccceec
Q 015042 237 EKAKAWLVGDPFDPTVRQGPQISERHFDRILSYIEHGKREGATLLTGGKPIG-DKGYYIEPTIFTNVKEDMIIAKEEIFG 315 (414)
Q Consensus 237 ~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~-~~g~~~~Ptvl~~~~~~~~~~~~E~fg 315 (414)
++++++++| .+++||++++.+++++++++++++.+|+++++||.... ..|+|+.|||+.+++++|.+++||+||
T Consensus 266 ~~~~~~~~g-----~~~~gp~i~~~~~~~~~~~i~~a~~~ga~~~~gg~~~~~~~~~~~~Ptvl~~~~~~~~~~~eE~fg 340 (432)
T cd07105 266 AAAEKLFAG-----PVVLGSLVSAAAADRVKELVDDALSKGAKLVVGGLADESPSGTSMPPTILDNVTPDMDIYSEESFG 340 (432)
T ss_pred HHHHhhcCC-----CCcccccCCHHHHHHHHHHHHHHHHCCCEEEeCCCcCCCCCCeEEeeEEEecCCCCCHHHhCCCcC
Confidence 999999988 57899999999999999999999999999999997653 368999999999999999999999999
Q ss_pred ceEEEEeeCCHHHHHHHhhcCCCCceEEEecCCHHHHHHHHHhcceeEEEEcCcCCC-CCCCCcccCCCCCCCccchHHH
Q 015042 316 PVMALMKFKTVEEAIKSANNTQYGLAAGIVTKDLNVANTVSRSIRAGIIWINCYFGF-SMDCPYGGYKMSGFGREYGLES 394 (414)
Q Consensus 316 Pvl~v~~~~~~~eai~~~n~~~~gl~~sv~s~d~~~~~~~~~~l~~g~v~iN~~~~~-~~~~p~gG~~~sG~g~~~g~~~ 394 (414)
||++|++|+|.|||++++|+++|||++||||+|.+.++++++++++|+|+||++... .+.+||||+|.||+|+++|++|
T Consensus 341 Pvl~v~~~~~~deai~~~n~~~~gL~~~v~t~d~~~~~~~~~~l~~g~v~vN~~~~~~~~~~PfgG~~~SG~G~~~g~~~ 420 (432)
T cd07105 341 PVVSIIRVKDEEEAVRIANDSEYGLSAAVFTRDLARALAVAKRIESGAVHINGMTVHDEPTLPHGGVKSSGYGRFNGKWG 420 (432)
T ss_pred CeEEEEeeCCHHHHHHHHhCCCCCceEEEEcCCHHHHHHHHHhCCcCeEEECCCCCCCCCCCCCCCcccccccccChHHH
Confidence 999999999999999999999999999999999999999999999999999998754 4779999999999999999999
Q ss_pred HHhhheeeEEEe
Q 015042 395 LYKYLQIKSVVT 406 (414)
Q Consensus 395 ~~~~~~~k~i~~ 406 (414)
+++|++.|+|++
T Consensus 421 l~~~~~~k~v~~ 432 (432)
T cd07105 421 IDEFTETKWITI 432 (432)
T ss_pred HHHhhceEEEeC
Confidence 999999999863
|
Salicylaldehyde dehydrogenase (DoxF, SaliADH, EC=1.2.1.65) involved in the upper naphthalene catabolic pathway of Pseudomonas strain C18 and other similar sequences are present in this CD. |
| >PTZ00381 aldehyde dehydrogenase family protein; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.3e-84 Score=657.79 Aligned_cols=399 Identities=28% Similarity=0.441 Sum_probs=367.3
Q ss_pred CHHHHHHHHHhHHHHHHHHHHhcCCChHHHhhchHHHHHHHHHHHHHhhhhhcCcc-ccc---CCCcccceeecCCceEE
Q 015042 1 MWKFADLIEEHVEELAALDALDAGKVYLRAKTAEIPGAAEFLRFFAGAADKIHGEV-LKM---SSELQGYTLREPVGVVG 76 (414)
Q Consensus 1 L~~~a~~l~~~~~~l~~~~~~etGk~~~e~~~~ei~~~~~~l~~~a~~~~~~~~~~-~~~---~~~~~~~~~~~P~Gvv~ 76 (414)
|+++++.|++|+++|++++++|+||+..|+...|+..+++.++++++..++..... ... ......+++++|+|||+
T Consensus 35 L~~l~~~l~~~~~~i~~a~~~d~Gk~~~ea~~~Ev~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~PlGVV~ 114 (493)
T PTZ00381 35 LRNLLRMLEENKQEFSEAVHKDLGRHPFETKMTEVLLTVAEIEHLLKHLDEYLKPEKVDTVGVFGPGKSYIIPEPLGVVL 114 (493)
T ss_pred HHHHHHHHHHhHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhCCcccCCccccCCCceEEEEecCcEEE
Confidence 57899999999999999999999999988766799999999999887765542221 111 12345788999999999
Q ss_pred EEcCCccchHHHHHhHHHHHhhCCeEEeecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhhHHHhhhCCCccEEEE
Q 015042 77 HIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLTALYYAHLAKLAGIPDGVLNVVPGFGPTAGAAICSHMDIDYVCF 156 (414)
Q Consensus 77 ~i~p~n~P~~~~~~~~~~aLaaGN~vv~kps~~~~~~~~~l~~~l~~aG~p~g~v~~v~~~~~~~~~~l~~~~~v~~v~~ 156 (414)
+|+|||||+...++++++||++||+||+|||+.+|.++..+.+++.++ +|+++++++++ +.+.+..|+.|+ +|+|.|
T Consensus 115 iI~PwN~Pl~l~~~~l~~ALaaGN~VIlKPse~tp~t~~~l~~ll~~~-lp~~~v~vv~g-~~~~~~~l~~~~-~d~i~F 191 (493)
T PTZ00381 115 VIGAWNYPLNLTLIPLAGAIAAGNTVVLKPSELSPHTSKLMAKLLTKY-LDPSYVRVIEG-GVEVTTELLKEP-FDHIFF 191 (493)
T ss_pred EECCCchHHHHHHHHHHHHHHcCCEEEEECCccCHHHHHHHHHHHHHh-CCcCEEEEecC-CHHHHHHHHhCC-CCEEEE
Confidence 999999999999999999999999999999999999999999999996 99999999998 667888899887 999999
Q ss_pred eCCcHHHHHHHHHHHhcccceeEEEcCCCCCceEcCCCCHHHHHHHHHHHhhccCCCCcccCceEEEeCchHHHHHHHHH
Q 015042 157 TGSTDVGRLVMQAAAASNLKQVSLELGGKSPLLIFDDADLDTAADVALLGNLYNKGEICVASSRVFVQEGIYDKFEKKLL 236 (414)
Q Consensus 157 tGs~~~g~~i~~~~a~~~~~~~~~e~gg~~~~iV~~dadl~~aa~~i~~~~~~~~Gq~C~a~~~i~V~~~i~d~f~~~l~ 236 (414)
|||+.+|+.|++.++ ++++|+++|+|||||+||++|||++.|++.+++++|.|+||.|++++++|||++++|+|+++|+
T Consensus 192 TGS~~vG~~V~~~aa-~~l~pv~lElGGk~p~iV~~dAdl~~Aa~~i~~g~~~naGQ~C~A~~~vlV~~~i~d~f~~~l~ 270 (493)
T PTZ00381 192 TGSPRVGKLVMQAAA-ENLTPCTLELGGKSPVIVDKSCNLKVAARRIAWGKFLNAGQTCVAPDYVLVHRSIKDKFIEALK 270 (493)
T ss_pred ECCHHHHHHHHHHHH-hcCCcEEEEcCCCCceEEcCCCCHHHHHHHHHHHHHhhcCCcCCCCCEEEEeHHHHHHHHHHHH
Confidence 999999999999988 8899999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhhcccCCCCCCCCcccccCCHHHHHHHHHHHHHHHHcCCEEEeCCcccCCCCceeeeEEEeeCCCcccccccceecc
Q 015042 237 EKAKAWLVGDPFDPTVRQGPQISERHFDRILSYIEHGKREGATLLTGGKPIGDKGYYIEPTIFTNVKEDMIIAKEEIFGP 316 (414)
Q Consensus 237 ~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgP 316 (414)
+.++++. |++.++++++||+++..+++++.++++ ++|+++++||... ..++|++|||+.+++++|.+++||+|||
T Consensus 271 ~~~~~~~-g~~~~~~~~~gpli~~~~~~ri~~~i~---~~ga~~~~gG~~~-~~~~~i~Ptvl~~v~~~~~i~~eEiFGP 345 (493)
T PTZ00381 271 EAIKEFF-GEDPKKSEDYSRIVNEFHTKRLAELIK---DHGGKVVYGGEVD-IENKYVAPTIIVNPDLDSPLMQEEIFGP 345 (493)
T ss_pred HHHHHHh-CCCCccCCCcCCCCCHHHHHHHHHHHH---hCCCcEEECCCcC-CCCCeEeeEEEecCCCCChHHhccccCC
Confidence 9999986 666678899999999999999999996 3688999999763 3688999999999999999999999999
Q ss_pred eEEEEeeCCHHHHHHHhhcCCCCceEEEecCCHHHHHHHHHhcceeEEEEcCcCC--CCCCCCcccCCCCCCCccchHHH
Q 015042 317 VMALMKFKTVEEAIKSANNTQYGLAAGIVTKDLNVANTVSRSIRAGIIWINCYFG--FSMDCPYGGYKMSGFGREYGLES 394 (414)
Q Consensus 317 vl~v~~~~~~~eai~~~n~~~~gl~~sv~s~d~~~~~~~~~~l~~g~v~iN~~~~--~~~~~p~gG~~~sG~g~~~g~~~ 394 (414)
|++|++|+|++|||+++|+++++|++||||+|.+.++++++++++|.|+||+... ..+.+||||.|.||+|+++|.+|
T Consensus 346 Vl~v~~~~~~deAi~~~n~~~~gLa~~vft~d~~~~~~~~~~~~sG~v~IN~~~~~~~~~~~PFGG~g~SG~G~~~G~~g 425 (493)
T PTZ00381 346 ILPILTYENIDEVLEFINSRPKPLALYYFGEDKRHKELVLENTSSGAVVINDCVFHLLNPNLPFGGVGNSGMGAYHGKYG 425 (493)
T ss_pred eEEEEeeCCHHHHHHHHhcCCCCceEEEECCCHHHHHHHHHhCCcceEEECCccccccCCCCCCCCcCcccccccchHHH
Confidence 9999999999999999999999999999999999999999999999999998754 45789999999999999999999
Q ss_pred HHhhheeeEEEeeC
Q 015042 395 LYKYLQIKSVVTPI 408 (414)
Q Consensus 395 ~~~~~~~k~i~~~~ 408 (414)
+++||+.|+|+.+.
T Consensus 426 ~~~fs~~k~v~~~~ 439 (493)
T PTZ00381 426 FDTFSHPKPVLNKS 439 (493)
T ss_pred HHhccceeEEEEcc
Confidence 99999999998763
|
|
| >cd07103 ALDH_F5_SSADH_GabD Mitochondrial succinate-semialdehyde dehydrogenase and ALDH family members 5A1 and 5F1-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.9e-84 Score=656.53 Aligned_cols=403 Identities=46% Similarity=0.765 Sum_probs=381.5
Q ss_pred CHHHHHHHHHhHHHHHHHHHHhcCCChHHHhhchHHHHHHHHHHHHHhhhhhcCcccccC-CCcccceeecCCceEEEEc
Q 015042 1 MWKFADLIEEHVEELAALDALDAGKVYLRAKTAEIPGAAEFLRFFAGAADKIHGEVLKMS-SELQGYTLREPVGVVGHII 79 (414)
Q Consensus 1 L~~~a~~l~~~~~~l~~~~~~etGk~~~e~~~~ei~~~~~~l~~~a~~~~~~~~~~~~~~-~~~~~~~~~~P~Gvv~~i~ 79 (414)
|+++++.|++++++|++++++|+|||..++ ..|+..+++.+++++...++..+...+.. .+...+.+++|+|||++|+
T Consensus 47 L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a-~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~ 125 (451)
T cd07103 47 LRRWADLIRERAEDLARLLTLEQGKPLAEA-RGEVDYAASFLEWFAEEARRIYGRTIPSPAPGKRILVIKQPVGVVAAIT 125 (451)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHcCCCHHHH-HHHHHHHHHHHHHHHHHHHHhcCcccccCCCCcceEEEEeeceEEEEEC
Confidence 578999999999999999999999999986 46999999999999888776655444332 4566789999999999999
Q ss_pred CCccchHHHHHhHHHHHhhCCeEEeecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhhHHHhhhCCCccEEEEeCC
Q 015042 80 PWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLTALYYAHLAKLAGIPDGVLNVVPGFGPTAGAAICSHMDIDYVCFTGS 159 (414)
Q Consensus 80 p~n~P~~~~~~~~~~aLaaGN~vv~kps~~~~~~~~~l~~~l~~aG~p~g~v~~v~~~~~~~~~~l~~~~~v~~v~~tGs 159 (414)
|||||+...++++++||++||+||+|||+.+|.++..+.++|.++|+|+|+++++++++.+.++.|+.|+++|.|.||||
T Consensus 126 p~N~P~~~~~~~~~~AL~aGN~VIlKps~~~~~~~~~l~~~l~~aglP~g~v~~v~~~~~~~~~~l~~~~~vd~V~ftGs 205 (451)
T cd07103 126 PWNFPAAMITRKIAPALAAGCTVVLKPAEETPLSALALAELAEEAGLPAGVLNVVTGSPAEIGEALCASPRVRKISFTGS 205 (451)
T ss_pred CCchHHHHHHHHHHHHHHcCCEEEEECCccCcHHHHHHHHHHHHcCCCcccEEEEecCchhHHHHHhcCCCCCEEEEECC
Confidence 99999999999999999999999999999999999999999999999999999999977778899999999999999999
Q ss_pred cHHHHHHHHHHHhcccceeEEEcCCCCCceEcCCCCHHHHHHHHHHHhhccCCCCcccCceEEEeCchHHHHHHHHHHHH
Q 015042 160 TDVGRLVMQAAAASNLKQVSLELGGKSPLLIFDDADLDTAADVALLGNLYNKGEICVASSRVFVQEGIYDKFEKKLLEKA 239 (414)
Q Consensus 160 ~~~g~~i~~~~a~~~~~~~~~e~gg~~~~iV~~dadl~~aa~~i~~~~~~~~Gq~C~a~~~i~V~~~i~d~f~~~l~~~~ 239 (414)
+.+|+.|.+.++ ++++|+++|+|||||+||++|||++.|++.+++++|.|+||.|+++++||||++++|+|+++|++.+
T Consensus 206 ~~~g~~v~~~aa-~~~~~~~lelgG~~~~iV~~dadl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~l~~~~ 284 (451)
T cd07103 206 TAVGKLLMAQAA-DTVKRVSLELGGNAPFIVFDDADLDKAVDGAIASKFRNAGQTCVCANRIYVHESIYDEFVEKLVERV 284 (451)
T ss_pred HHHHHHHHHHHH-hcCCcEEEECCCCCeEEECCCCCHHHHHHHHHHHHHHhcCCCCCCCeeEEEcHHHHHHHHHHHHHHH
Confidence 999999999988 8899999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhcccCCCCCCCCcccccCCHHHHHHHHHHHHHHHHcCCEEEeCCcccCCCCceeeeEEEeeCCCcccccccceecceEE
Q 015042 240 KAWLVGDPFDPTVRQGPQISERHFDRILSYIEHGKREGATLLTGGKPIGDKGYYIEPTIFTNVKEDMIIAKEEIFGPVMA 319 (414)
Q Consensus 240 ~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~ 319 (414)
+++++|+|.++++.+||++++.+++++.+++++++.+|+++++||.....+|+|+.|||+.++++++.++++|+||||++
T Consensus 285 ~~~~~g~~~~~~~~~gp~i~~~~~~~~~~~i~~a~~~ga~~l~gg~~~~~~g~~~~Ptil~~~~~~~~~~~~E~fgPvl~ 364 (451)
T cd07103 285 KKLKVGNGLDEGTDMGPLINERAVEKVEALVEDAVAKGAKVLTGGKRLGLGGYFYEPTVLTDVTDDMLIMNEETFGPVAP 364 (451)
T ss_pred HhccCCCCCCCCCCCCcCcCHHHHHHHHHHHHHHHHCCCEEEeCCCcCCCCCcEECCEEeeCCCCcCHHHhCCCCCceEE
Confidence 99999999999999999999999999999999999999999999977544789999999999999999999999999999
Q ss_pred EEeeCCHHHHHHHhhcCCCCceEEEecCCHHHHHHHHHhcceeEEEEcCcCCCCCCCCcccCCCCCCCccchHHHHHhhh
Q 015042 320 LMKFKTVEEAIKSANNTQYGLAAGIVTKDLNVANTVSRSIRAGIIWINCYFGFSMDCPYGGYKMSGFGREYGLESLYKYL 399 (414)
Q Consensus 320 v~~~~~~~eai~~~n~~~~gl~~sv~s~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~p~gG~~~sG~g~~~g~~~~~~~~ 399 (414)
|++|+|++||++++|++++||++||||+|.+.++++++++++|.|+||++....+.+||||.|.||+|+++|++++++||
T Consensus 365 v~~~~~~~eai~~~n~~~~gl~~~i~t~d~~~~~~~~~~l~~g~v~vN~~~~~~~~~pfgG~~~SG~G~~~g~~~~~~~~ 444 (451)
T cd07103 365 IIPFDTEDEVIARANDTPYGLAAYVFTRDLARAWRVAEALEAGMVGINTGLISDAEAPFGGVKESGLGREGGKEGLEEYL 444 (451)
T ss_pred EEEECCHHHHHHHHhCCCCCceEEEECCCHHHHHHHHHhCCcceEEECCCCCCCCCCCcCCCccCcCCccchHHHHHHHh
Confidence 99999999999999999999999999999999999999999999999999877788999999999999999999999999
Q ss_pred eeeEEE
Q 015042 400 QIKSVV 405 (414)
Q Consensus 400 ~~k~i~ 405 (414)
++|++.
T Consensus 445 ~~k~v~ 450 (451)
T cd07103 445 ETKYVS 450 (451)
T ss_pred ceeEEe
Confidence 999875
|
Succinate-semialdehyde dehydrogenase, mitochondrial (SSADH, GabD, EC=1.2.1.24) catalyzes the NAD+-dependent oxidation of succinate semialdehyde (SSA) to succinate. This group includes the human aldehyde dehydrogenase family 5 member A1 (ALDH5A1) which is a mitochondrial homotetramer that converts SSA to succinate in the last step of 4-aminobutyric acid (GABA) catabolism. This CD also includes the Arabidopsis SSADH gene product ALDH5F1. Mutations in this gene result in the accumulation of H2O2, suggesting a role in plant defense against the environmental stress of elevated reactive oxygen species. |
| >cd07135 ALDH_F14-YMR110C Saccharomyces cerevisiae aldehyde dehydrogenase family 14 and related proteins | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.5e-84 Score=650.40 Aligned_cols=396 Identities=30% Similarity=0.464 Sum_probs=367.0
Q ss_pred CHHHHHHHHHhHHHHHHHHHHhcCCChHHHhhchHHHHHHHHHHHHHhhhhhcCcc-cccC----CCcccceeecCCceE
Q 015042 1 MWKFADLIEEHVEELAALDALDAGKVYLRAKTAEIPGAAEFLRFFAGAADKIHGEV-LKMS----SELQGYTLREPVGVV 75 (414)
Q Consensus 1 L~~~a~~l~~~~~~l~~~~~~etGk~~~e~~~~ei~~~~~~l~~~a~~~~~~~~~~-~~~~----~~~~~~~~~~P~Gvv 75 (414)
|+++++.|++|+++|++++++|+|||..++...|+..+++.+++++..+++..... .... .+...++.++|+|||
T Consensus 33 L~~~a~~l~~~~~~l~~~~~~e~Gk~~~e~~~~ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv 112 (436)
T cd07135 33 LKQLYWAVKDNEEAIVEALKKDLGRPPFETLLTEVSGVKNDILHMLKNLKKWAKDEKVKDGPLAFMFGKPRIRKEPLGVV 112 (436)
T ss_pred HHHHHHHHHHhHHHHHHHHHHHhCCCHHHHhHHHHHHHHHHHHHHHHHHHHhhCCcccCCcccccCCCceEEEeccCcEE
Confidence 67899999999999999999999999997655699999999999998876653322 1111 244678899999999
Q ss_pred EEEcCCccchHHHHHhHHHHHhhCCeEEeecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhhHHHhhhCCCccEEE
Q 015042 76 GHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLTALYYAHLAKLAGIPDGVLNVVPGFGPTAGAAICSHMDIDYVC 155 (414)
Q Consensus 76 ~~i~p~n~P~~~~~~~~~~aLaaGN~vv~kps~~~~~~~~~l~~~l~~aG~p~g~v~~v~~~~~~~~~~l~~~~~v~~v~ 155 (414)
++|+|||||+...++++++||++||+||+|||+.+|.++..+.+++.+ |+|+|+++++++.+.+. ..|+.|+ +|.|.
T Consensus 113 ~~I~p~N~P~~~~~~~~~~ALaaGN~Vi~Kps~~~p~~~~~l~~l~~~-~lP~g~v~vv~g~~~~~-~~l~~~~-vd~v~ 189 (436)
T cd07135 113 LIIGPWNYPVLLALSPLVGAIAAGCTVVLKPSELTPHTAALLAELVPK-YLDPDAFQVVQGGVPET-TALLEQK-FDKIF 189 (436)
T ss_pred EEECCCcchHHHHHHHHHHHHHcCCEEEEECCccChHHHHHHHHHHHH-hCCcCEEEEEcCCchhH-HHHHhCC-CCEEE
Confidence 999999999999999999999999999999999999999999999999 69999999999865554 5688999 99999
Q ss_pred EeCCcHHHHHHHHHHHhcccceeEEEcCCCCCceEcCCCCHHHHHHHHHHHhhccCCCCcccCceEEEeCchHHHHHHHH
Q 015042 156 FTGSTDVGRLVMQAAAASNLKQVSLELGGKSPLLIFDDADLDTAADVALLGNLYNKGEICVASSRVFVQEGIYDKFEKKL 235 (414)
Q Consensus 156 ~tGs~~~g~~i~~~~a~~~~~~~~~e~gg~~~~iV~~dadl~~aa~~i~~~~~~~~Gq~C~a~~~i~V~~~i~d~f~~~l 235 (414)
||||+.+|+.|.+.++ .+++|+++|+|||||+||++|||++.|++.+++++|.++||.|+++++||||++++|+|+++|
T Consensus 190 ftGs~~~g~~i~~~aa-~~~~~~~lelgG~~~~iV~~dADl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~d~f~~~l 268 (436)
T cd07135 190 YTGSGRVGRIIAEAAA-KHLTPVTLELGGKSPVIVTKNADLELAAKRILWGKFGNAGQICVAPDYVLVDPSVYDEFVEEL 268 (436)
T ss_pred EECCcHHHHHHHHHHH-hcCCCeEEEccCCCcEEECCCCCHHHHHHHHHHHHhccCCceecCCCEEeccHHHHHHHHHHH
Confidence 9999999999999887 889999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhhcccCCCCCCCCcccccCCHHHHHHHHHHHHHHHHcCCEEEeCCcccCCCCceeeeEEEeeCCCcccccccceec
Q 015042 236 LEKAKAWLVGDPFDPTVRQGPQISERHFDRILSYIEHGKREGATLLTGGKPIGDKGYYIEPTIFTNVKEDMIIAKEEIFG 315 (414)
Q Consensus 236 ~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fg 315 (414)
++.++++++|+| ++++.+||+++..+++++.++++++ |+++++||... ++|+|++|||+.++++++.++++|+||
T Consensus 269 ~~~~~~~~~g~p-~~~~~~gpli~~~~~~~i~~~v~~a---g~~v~~gg~~~-~~g~~~~Ptvl~~~~~~~~~~~~E~Fg 343 (436)
T cd07135 269 KKVLDEFYPGGA-NASPDYTRIVNPRHFNRLKSLLDTT---KGKVVIGGEMD-EATRFIPPTIVSDVSWDDSLMSEELFG 343 (436)
T ss_pred HHHHHHhcCCCC-CCCCCcCCCCCHHHHHHHHHHHHhc---CCeEEECCCcC-CCCCEEccEEEecCCCccHHHhccccC
Confidence 999999999999 8999999999999999999999987 78999999764 368999999999999999999999999
Q ss_pred ceEEEEeeCCHHHHHHHhhcCCCCceEEEecCCHHHHHHHHHhcceeEEEEcCcCC--CCCCCCcccCCCCCCCccchHH
Q 015042 316 PVMALMKFKTVEEAIKSANNTQYGLAAGIVTKDLNVANTVSRSIRAGIIWINCYFG--FSMDCPYGGYKMSGFGREYGLE 393 (414)
Q Consensus 316 Pvl~v~~~~~~~eai~~~n~~~~gl~~sv~s~d~~~~~~~~~~l~~g~v~iN~~~~--~~~~~p~gG~~~sG~g~~~g~~ 393 (414)
||++|++|+|+||||+++|+++|||++||||+|.+.++++++++++|+|+||+... ..+.+||||+|.||+|+++|.+
T Consensus 344 Pvl~v~~~~~~deai~~an~~~~gL~~~v~t~d~~~a~~~~~~l~~g~v~iN~~~~~~~~~~~PfGG~k~SG~G~~~g~~ 423 (436)
T cd07135 344 PVLPIIKVDDLDEAIKVINSRDTPLALYIFTDDKSEIDHILTRTRSGGVVINDTLIHVGVDNAPFGGVGDSGYGAYHGKY 423 (436)
T ss_pred CceEEEecCCHHHHHHHHhCCCCCceEEEEcCCHHHHHHHHhcCCcCeEEECCccccccCCCCCcCCcCcccCCccccHh
Confidence 99999999999999999999999999999999999999999999999999998764 3578999999999999999999
Q ss_pred HHHhhheeeEEE
Q 015042 394 SLYKYLQIKSVV 405 (414)
Q Consensus 394 ~~~~~~~~k~i~ 405 (414)
|+++||+.|+|.
T Consensus 424 ~l~~~t~~k~i~ 435 (436)
T cd07135 424 GFDTFTHERTVV 435 (436)
T ss_pred HHHHhccccccc
Confidence 999999999873
|
Aldehyde dehydrogenase family 14 (ALDH14), isolated mainly from the mitochondrial outer membrane of Saccharomyces cerevisiae (YMR110C) and most closely related to the plant and animal ALDHs and fatty ALDHs family 3 members, and similar fungal sequences, are present in this CD. |
| >TIGR01722 MMSDH methylmalonic acid semialdehyde dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=8e-84 Score=655.63 Aligned_cols=403 Identities=32% Similarity=0.492 Sum_probs=375.3
Q ss_pred CHHHHHHHHHhHHHHHHHHHHhcCCChHHHhhchHHHHHHHHHHHHHhhhhhcCcccccC-CCcccceeecCCceEEEEc
Q 015042 1 MWKFADLIEEHVEELAALDALDAGKVYLRAKTAEIPGAAEFLRFFAGAADKIHGEVLKMS-SELQGYTLREPVGVVGHII 79 (414)
Q Consensus 1 L~~~a~~l~~~~~~l~~~~~~etGk~~~e~~~~ei~~~~~~l~~~a~~~~~~~~~~~~~~-~~~~~~~~~~P~Gvv~~i~ 79 (414)
|+++++.|++++++|+++++.|+|||..++. .|+..+++.+++++.......+...+.. .+...+.+++|+|||++|+
T Consensus 66 L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~-~ev~~~i~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~P~Gvv~~I~ 144 (477)
T TIGR01722 66 LLRYQALLKEHRDEIAELITAEHGKTHSDAL-GDVARGLEVVEHACGVNSLLKGETSTQVATRVDVYSIRQPLGVCAGIT 144 (477)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcCCCHHHHH-HHHHHHHHHHHHHHHHHHHhcCcccccCCCCceEEEEEcccceEEEEc
Confidence 5789999999999999999999999999764 6999999999999887766555433321 2345677899999999999
Q ss_pred CCccchHHHHHhHHHHHhhCCeEEeecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhhHHHhhhCCCccEEEEeCC
Q 015042 80 PWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLTALYYAHLAKLAGIPDGVLNVVPGFGPTAGAAICSHMDIDYVCFTGS 159 (414)
Q Consensus 80 p~n~P~~~~~~~~~~aLaaGN~vv~kps~~~~~~~~~l~~~l~~aG~p~g~v~~v~~~~~~~~~~l~~~~~v~~v~~tGs 159 (414)
|||||+...++++++||++||+||+|||+.+|.++..+.++|.++|+|+|+++++++ +.+.++.|+.||+|+.|+||||
T Consensus 145 p~N~P~~~~~~~~~~ALaaGN~VilKps~~~p~~~~~l~~~l~~aglP~g~~~~v~g-~~~~~~~L~~~~~v~~V~ftGS 223 (477)
T TIGR01722 145 PFNFPAMIPLWMFPIAIACGNTFVLKPSEKVPSAAVKLAELFSEAGAPDGVLNVVHG-DKEAVDRLLEHPDVKAVSFVGS 223 (477)
T ss_pred cCChHHHHHHHHHHHHHhcCCEEEeeCcccChHHHHHHHHHHHHhCcCCCeEEEEeC-CHHHHHHHHcCCCcCEEEEECC
Confidence 999999999999999999999999999999999999999999999999999999998 5567889999999999999999
Q ss_pred cHHHHHHHHHHHhcccceeEEEcCCCCCceEcCCCCHHHHHHHHHHHhhccCCCCcccCceEEEeCchHHHHHHHHHHHH
Q 015042 160 TDVGRLVMQAAAASNLKQVSLELGGKSPLLIFDDADLDTAADVALLGNLYNKGEICVASSRVFVQEGIYDKFEKKLLEKA 239 (414)
Q Consensus 160 ~~~g~~i~~~~a~~~~~~~~~e~gg~~~~iV~~dadl~~aa~~i~~~~~~~~Gq~C~a~~~i~V~~~i~d~f~~~l~~~~ 239 (414)
+.+|+.|.+.++ ..++|+++|+||+||+||++|||++.|++.+++++|.|+||.|++++|||||+++ |+|+++|++++
T Consensus 224 ~~~g~~v~~~a~-~~~~~v~lElGG~n~~iV~~dADl~~a~~~i~~~~f~~~GQ~C~a~~rl~v~~~~-~~f~~~l~~~~ 301 (477)
T TIGR01722 224 TPIGRYIHTTGS-AHGKRVQALGGAKNHMVVMPDADKDAAADALVGAAYGAAGQRCMAISAAVLVGAA-DEWVPEIRERA 301 (477)
T ss_pred HHHHHHHHHHHH-hcCCeEEEECCCCCceEECCCCCHHHHHHHHHHHHHHhcCCCCCCCeEEEEeCcH-HHHHHHHHHHH
Confidence 999999999887 7899999999999999999999999999999999999999999999999999998 99999999999
Q ss_pred hhcccCCCCCCCCcccccCCHHHHHHHHHHHHHHHHcCCEEEeCCcccC----CCCceeeeEEEeeCCCcccccccceec
Q 015042 240 KAWLVGDPFDPTVRQGPQISERHFDRILSYIEHGKREGATLLTGGKPIG----DKGYYIEPTIFTNVKEDMIIAKEEIFG 315 (414)
Q Consensus 240 ~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~----~~g~~~~Ptvl~~~~~~~~~~~~E~fg 315 (414)
+++++|+|.++++++||++++.+++++++++++++++|+++++||.... .+|+|+.|||+.+++++|.++++|+||
T Consensus 302 ~~~~~G~~~~~~~~~Gp~i~~~~~~~~~~~i~~a~~~Ga~il~gg~~~~~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~Fg 381 (477)
T TIGR01722 302 EKIRIGPGDDPGAEMGPLITPQAKDRVASLIAGGAAEGAEVLLDGRGYKVDGYEEGNWVGPTLLERVPPTMKAYQEEIFG 381 (477)
T ss_pred hcCCCCCCCCCCCCcCCCcCHHHHHHHHHHHHHHHHCCCEEEeCCCcCCCCCCCCCeEECCEEeeCCCCCChhhhCCCCC
Confidence 9999999999999999999999999999999999999999999987631 358999999999999999999999999
Q ss_pred ceEEEEeeCCHHHHHHHhhcCCCCceEEEecCCHHHHHHHHHhcceeEEEEcCcCCC-CCCCCcccCCCCCCC--ccchH
Q 015042 316 PVMALMKFKTVEEAIKSANNTQYGLAAGIVTKDLNVANTVSRSIRAGIIWINCYFGF-SMDCPYGGYKMSGFG--REYGL 392 (414)
Q Consensus 316 Pvl~v~~~~~~~eai~~~n~~~~gl~~sv~s~d~~~~~~~~~~l~~g~v~iN~~~~~-~~~~p~gG~~~sG~g--~~~g~ 392 (414)
||++|++|+|++|||+++|+++|||++||||+|.+.++++++++++|.|+||++... .+.+||||+|.||+| +++|.
T Consensus 382 Pvl~V~~~~~~~eai~~~n~~~~gl~~~v~t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~~pfgG~k~SG~G~~~~~g~ 461 (477)
T TIGR01722 382 PVLCVLEADTLEEAIALINASPYGNGTAIFTRDGAAARRFQHEIEVGQVGVNVPIPVPLPYFSFTGWKDSFFGDHHIYGK 461 (477)
T ss_pred CeEEEEEeCCHHHHHHHHhCCCCCCeEEEEcCCHHHHHHHHHhCCeeeEEECCCCCCCCCCCCCCccccccCCCCccChH
Confidence 999999999999999999999999999999999999999999999999999986543 367899999999999 57899
Q ss_pred HHHHhhheeeEEEee
Q 015042 393 ESLYKYLQIKSVVTP 407 (414)
Q Consensus 393 ~~~~~~~~~k~i~~~ 407 (414)
+++++||++|+|++.
T Consensus 462 ~~l~~~~~~k~i~~~ 476 (477)
T TIGR01722 462 QGTHFYTRGKTVTTR 476 (477)
T ss_pred HHHHHhcCeeEEEEe
Confidence 999999999999875
|
In Bacillus, a highly homologous protein to methylmalonic acid semialdehyde dehydrogenase, groups out from the main MMSDH clade with Listeria and Sulfolobus. This Bacillus protein has been suggested to be located in an iol operon and/or involved in myo-inositol catabolism, converting malonic semialdehyde to acetyl CoA ad CO2. The preceeding enzymes responsible for valine catabolism are present in Bacillus, Listeria, and Sulfolobus. |
| >cd07098 ALDH_F15-22 Aldehyde dehydrogenase family 15A1 and 22A1-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.5e-84 Score=655.01 Aligned_cols=405 Identities=35% Similarity=0.546 Sum_probs=373.7
Q ss_pred CHHHHHHHHHhHHHHHHHHHHhcCCChHHHhhchHHHHHHHHHHHHHhhhhhcCc-ccccC---CCcccceeecCCceEE
Q 015042 1 MWKFADLIEEHVEELAALDALDAGKVYLRAKTAEIPGAAEFLRFFAGAADKIHGE-VLKMS---SELQGYTLREPVGVVG 76 (414)
Q Consensus 1 L~~~a~~l~~~~~~l~~~~~~etGk~~~e~~~~ei~~~~~~l~~~a~~~~~~~~~-~~~~~---~~~~~~~~~~P~Gvv~ 76 (414)
|+++++.|.+++++|++++++|+|||..++...|+..+++.+++++....+.... ..+.. .+...+++++|+|||+
T Consensus 46 L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~ 125 (465)
T cd07098 46 LRSLLKYILENQEEICRVACRDTGKTMVDASLGEILVTCEKIRWTLKHGEKALRPESRPGGLLMFYKRARVEYEPLGVVG 125 (465)
T ss_pred HHHHHHHHHHhHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhCCcccCCccccCCceeEEEEecceeEE
Confidence 5789999999999999999999999999876679999999999998776553222 11111 1234578899999999
Q ss_pred EEcCCccchHHHHHhHHHHHhhCCeEEeecCCCChHHHHHHHHH----HHHcCCCCCcEEEEeCCchhhHHHhhhCCCcc
Q 015042 77 HIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLTALYYAHL----AKLAGIPDGVLNVVPGFGPTAGAAICSHMDID 152 (414)
Q Consensus 77 ~i~p~n~P~~~~~~~~~~aLaaGN~vv~kps~~~~~~~~~l~~~----l~~aG~p~g~v~~v~~~~~~~~~~l~~~~~v~ 152 (414)
+|+|||||+..++.++++||++||+||+|||+.+|+++..+.++ |.++|+|+|+++++++++ +.++.|+.||+|+
T Consensus 126 ~I~p~n~P~~~~~~~~~~ALaaGN~VIlKps~~~p~~~~~~~~~~~~~l~~aGlP~gvv~~v~g~~-~~~~~L~~~~~v~ 204 (465)
T cd07098 126 AIVSWNYPFHNLLGPIIAALFAGNAIVVKVSEQVAWSSGFFLSIIRECLAACGHDPDLVQLVTCLP-ETAEALTSHPVID 204 (465)
T ss_pred EEcccCcHHHHHHHHHHHHHHcCCEEEEECCCcCcHHHHHHHHHHHHHHHhcCCCCCeEEEEECCH-HHHHHHhcCCCCC
Confidence 99999999999999999999999999999999999999876554 578999999999999955 7899999999999
Q ss_pred EEEEeCCcHHHHHHHHHHHhcccceeEEEcCCCCCceEcCCCCHHHHHHHHHHHhhccCCCCcccCceEEEeCchHHHHH
Q 015042 153 YVCFTGSTDVGRLVMQAAAASNLKQVSLELGGKSPLLIFDDADLDTAADVALLGNLYNKGEICVASSRVFVQEGIYDKFE 232 (414)
Q Consensus 153 ~v~~tGs~~~g~~i~~~~a~~~~~~~~~e~gg~~~~iV~~dadl~~aa~~i~~~~~~~~Gq~C~a~~~i~V~~~i~d~f~ 232 (414)
.|.||||+.+|+.|.+.++ .+++|+++|+|||||+||++|||++.|++.+++++|.++||.|+++++||||++++|+|+
T Consensus 205 ~V~ftGs~~~g~~v~~~a~-~~~~~~~lelgG~~~~iV~~dadl~~a~~~i~~~~~~~~GQ~C~a~~rv~V~~~i~d~f~ 283 (465)
T cd07098 205 HITFIGSPPVGKKVMAAAA-ESLTPVVLELGGKDPAIVLDDADLDQIASIIMRGTFQSSGQNCIGIERVIVHEKIYDKLL 283 (465)
T ss_pred EEEEECCHHHHHHHHHHHH-hcCCeEEEECCCCCeEEECCCCCHHHHHHHHHHHHHhcCCCCCcCCcEEEEcHHHHHHHH
Confidence 9999999999999999988 889999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhhcccCCCCCCCCcccccCCHHHHHHHHHHHHHHHHcCCEEEeCCcccC----CCCceeeeEEEeeCCCcccc
Q 015042 233 KKLLEKAKAWLVGDPFDPTVRQGPQISERHFDRILSYIEHGKREGATLLTGGKPIG----DKGYYIEPTIFTNVKEDMII 308 (414)
Q Consensus 233 ~~l~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~----~~g~~~~Ptvl~~~~~~~~~ 308 (414)
++|+++++++++|+|.++++++||++++.+++++.+++++++.+|+++++||.... ..|+|+.|||+.+++++|.+
T Consensus 284 ~~L~~~~~~l~~G~p~~~~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~~~~~~~g~~~~Ptvl~~~~~~~~~ 363 (465)
T cd07098 284 EILTDRVQALRQGPPLDGDVDVGAMISPARFDRLEELVADAVEKGARLLAGGKRYPHPEYPQGHYFPPTLLVDVTPDMKI 363 (465)
T ss_pred HHHHHHHHhcCCCCCCCCCCCcCCCCCHHHHHHHHHHHHHHHHCCCEEEeCCccCCcCcCCCCcEEcCEEEeCCCCCCHH
Confidence 99999999999999999999999999999999999999999999999999986532 25899999999999999999
Q ss_pred cccceecceEEEEeeCCHHHHHHHhhcCCCCceEEEecCCHHHHHHHHHhcceeEEEEcCcCC--CCCCCCcccCCCCCC
Q 015042 309 AKEEIFGPVMALMKFKTVEEAIKSANNTQYGLAAGIVTKDLNVANTVSRSIRAGIIWINCYFG--FSMDCPYGGYKMSGF 386 (414)
Q Consensus 309 ~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~sv~s~d~~~~~~~~~~l~~g~v~iN~~~~--~~~~~p~gG~~~sG~ 386 (414)
+++|+||||++|++|+|.+||++++|+++|||++||||+|.+.++++++++++|.|+||+... ..+.+||||+|.||+
T Consensus 364 ~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gLsa~i~t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~~~PfgG~k~SG~ 443 (465)
T cd07098 364 AQEEVFGPVMVVMKASDDEEAVEIANSTEYGLGASVFGKDIKRARRIASQLETGMVAINDFGVNYYVQQLPFGGVKGSGF 443 (465)
T ss_pred HhCCCcCCeEEEEEeCCHHHHHHHHhCCCCCceEEEEcCCHHHHHHHHHhCCcceEEECCCCCCCCCCCCCcCccccccC
Confidence 999999999999999999999999999999999999999999999999999999999998754 346899999999999
Q ss_pred CccchHHHHHhhheeeEEEee
Q 015042 387 GREYGLESLYKYLQIKSVVTP 407 (414)
Q Consensus 387 g~~~g~~~~~~~~~~k~i~~~ 407 (414)
|+++|++++++|+++|+|+++
T Consensus 444 G~~~g~~~~~~~~~~k~~~~~ 464 (465)
T cd07098 444 GRFAGEEGLRGLCNPKSVTED 464 (465)
T ss_pred CccChHHHHHHhheeEEEEEe
Confidence 999999999999999999765
|
Aldehyde dehydrogenase family members ALDH15A1 (Saccharomyces cerevisiae YHR039C) and ALDH22A1 (Arabidopsis thaliana, EC=1.2.1.3), and similar sequences, are in this CD. Significant improvement of stress tolerance in tobacco plants was observed by overexpressing the ALDH22A1 gene from maize (Zea mays) and was accompanied by a reduction of malondialdehyde derived from cellular lipid peroxidation. |
| >PLN00412 NADP-dependent glyceraldehyde-3-phosphate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.6e-84 Score=657.25 Aligned_cols=402 Identities=31% Similarity=0.476 Sum_probs=371.5
Q ss_pred CHHHHHHHHHhHHHHHHHHHHhcCCChHHHhhchHHHHHHHHHHHHHhhhhhcCc--cccc---C---CCcccceeecCC
Q 015042 1 MWKFADLIEEHVEELAALDALDAGKVYLRAKTAEIPGAAEFLRFFAGAADKIHGE--VLKM---S---SELQGYTLREPV 72 (414)
Q Consensus 1 L~~~a~~l~~~~~~l~~~~~~etGk~~~e~~~~ei~~~~~~l~~~a~~~~~~~~~--~~~~---~---~~~~~~~~~~P~ 72 (414)
|+++++.|++|+++|++++++|+|||..++ ..|+..+++.+++++..+.+.... .... . .+...+.+++|+
T Consensus 81 L~~~a~~l~~~~~el~~~~~~e~Gk~~~~a-~~Ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~ 159 (496)
T PLN00412 81 LHKAAAILKEHKAPIAECLVKEIAKPAKDA-VTEVVRSGDLISYTAEEGVRILGEGKFLVSDSFPGNERNKYCLTSKIPL 159 (496)
T ss_pred HHHHHHHHHHhHHHHHHHHHHHcCCCHHHH-HHHHHHHHHHHHHHHHHHHHHhcCCcccccccCCCccCCceeEEEEecc
Confidence 578999999999999999999999999986 469999999999998776554321 2211 1 122356789999
Q ss_pred ceEEEEcCCccchHHHHHhHHHHHhhCCeEEeecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhhHHHhhhCCCcc
Q 015042 73 GVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLTALYYAHLAKLAGIPDGVLNVVPGFGPTAGAAICSHMDID 152 (414)
Q Consensus 73 Gvv~~i~p~n~P~~~~~~~~~~aLaaGN~vv~kps~~~~~~~~~l~~~l~~aG~p~g~v~~v~~~~~~~~~~l~~~~~v~ 152 (414)
|||++|+|||||+...++++++||++||+||+|||+.+|.++..+++++.++|+|+++++++++++.+.++.|..||++|
T Consensus 160 GVv~~I~p~N~P~~~~~~~i~~ALaaGN~VIlKPs~~t~~~~~~l~~~l~~aglP~g~~~~v~g~~~~~~~~l~~~~~v~ 239 (496)
T PLN00412 160 GVVLAIPPFNYPVNLAVSKIAPALIAGNAVVLKPPTQGAVAALHMVHCFHLAGFPKGLISCVTGKGSEIGDFLTMHPGVN 239 (496)
T ss_pred eEEEEECCCCchHHHHHHHHHHHHHcCCEEEEECCccCcHHHHHHHHHHHHhCCCcccEEEEecCchHHHHHHhcCCCcC
Confidence 99999999999999999999999999999999999999999999999999999999999999987777899999999999
Q ss_pred EEEEeCCcHHHHHHHHHHHhcccceeEEEcCCCCCceEcCCCCHHHHHHHHHHHhhccCCCCcccCceEEEeCchHHHHH
Q 015042 153 YVCFTGSTDVGRLVMQAAAASNLKQVSLELGGKSPLLIFDDADLDTAADVALLGNLYNKGEICVASSRVFVQEGIYDKFE 232 (414)
Q Consensus 153 ~v~~tGs~~~g~~i~~~~a~~~~~~~~~e~gg~~~~iV~~dadl~~aa~~i~~~~~~~~Gq~C~a~~~i~V~~~i~d~f~ 232 (414)
.|.|||| .+|+.|.+.++ ++|+++|+|||||+||++|||++.|++.+++++|.|+||.|+++++||||++++|+|+
T Consensus 240 ~V~ftGs-~~g~~v~~~a~---~~~~~lElGG~~p~iV~~dADl~~Aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~d~f~ 315 (496)
T PLN00412 240 CISFTGG-DTGIAISKKAG---MVPLQMELGGKDACIVLEDADLDLAAANIIKGGFSYSGQRCTAVKVVLVMESVADALV 315 (496)
T ss_pred EEEEeCh-HHHHHHHHHhC---CCcEEEEcCCCceEEEcCCCCHHHHHHHHHHHHHhcCCCCCccCeEEEEcHHHHHHHH
Confidence 9999999 99999998764 7899999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhhcccCCCCCCCCcccccCCHHHHHHHHHHHHHHHHcCCEEEeCCcccCCCCceeeeEEEeeCCCcccccccc
Q 015042 233 KKLLEKAKAWLVGDPFDPTVRQGPQISERHFDRILSYIEHGKREGATLLTGGKPIGDKGYYIEPTIFTNVKEDMIIAKEE 312 (414)
Q Consensus 233 ~~l~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E 312 (414)
++|+++++++++|+|.+ ++++||+++..+++++.+++++++..|++++++|.. .|+|+.|||+.++++++++++||
T Consensus 316 ~~l~~~~~~~~~g~p~~-~~~~gp~i~~~~~~~v~~~i~~a~~~Ga~~l~~~~~---~g~~~~Ptvl~~v~~~~~i~~eE 391 (496)
T PLN00412 316 EKVNAKVAKLTVGPPED-DCDITPVVSESSANFIEGLVMDAKEKGATFCQEWKR---EGNLIWPLLLDNVRPDMRIAWEE 391 (496)
T ss_pred HHHHHHHHhCccCCCcc-cCCcCCCcCHHHHHHHHHHHHHHHHCCCEEEecCCC---CCeEEecEEEeCCCCCCHHHhCc
Confidence 99999999999999987 789999999999999999999999999999997753 68999999999999999999999
Q ss_pred eecceEEEEeeCCHHHHHHHhhcCCCCceEEEecCCHHHHHHHHHhcceeEEEEcCcCC-CCCCCCcccCCCCCCCccch
Q 015042 313 IFGPVMALMKFKTVEEAIKSANNTQYGLAAGIVTKDLNVANTVSRSIRAGIIWINCYFG-FSMDCPYGGYKMSGFGREYG 391 (414)
Q Consensus 313 ~fgPvl~v~~~~~~~eai~~~n~~~~gl~~sv~s~d~~~~~~~~~~l~~g~v~iN~~~~-~~~~~p~gG~~~sG~g~~~g 391 (414)
+||||++|++|+|+||||+++|+++|||++||||+|.++++++++++++|+|+||++.. ..+.+||||+|.||+|+++|
T Consensus 392 ~FgPvl~v~~~~~~deai~~an~~~~gL~a~v~t~d~~~a~~~~~~l~~G~v~vN~~~~~~~~~~PfGG~k~SG~G~~~g 471 (496)
T PLN00412 392 PFGPVLPVIRINSVEEGIHHCNASNFGLQGCVFTRDINKAILISDAMETGTVQINSAPARGPDHFPFQGLKDSGIGSQGI 471 (496)
T ss_pred CCCCeEEEEEeCCHHHHHHHHhCCCCCceEEEEcCCHHHHHHHHHhCCcceEEEcCCCCCCCCCCCCCCccccccCCCCh
Confidence 99999999999999999999999999999999999999999999999999999999864 44579999999999999999
Q ss_pred HHHHHhhheeeEEEeeCCCC
Q 015042 392 LESLYKYLQIKSVVTPIYNS 411 (414)
Q Consensus 392 ~~~~~~~~~~k~i~~~~~~~ 411 (414)
++|+++||+.|+|+++.+..
T Consensus 472 ~~~~~~ft~~k~i~~~~~~~ 491 (496)
T PLN00412 472 TNSINMMTKVKSTVINLPKP 491 (496)
T ss_pred HHHHHHhcceEEEEEecCCC
Confidence 99999999999998876543
|
|
| >cd07133 ALDH_CALDH_CalB Coniferyl aldehyde dehydrogenase-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.8e-84 Score=647.90 Aligned_cols=399 Identities=31% Similarity=0.429 Sum_probs=367.7
Q ss_pred CHHHHHHHHHhHHHHHHHHHHhcCCC-hHHHhhchHHHHHHHHHHHHHhhhhhcCccc-cc---CCCcccceeecCCceE
Q 015042 1 MWKFADLIEEHVEELAALDALDAGKV-YLRAKTAEIPGAAEFLRFFAGAADKIHGEVL-KM---SSELQGYTLREPVGVV 75 (414)
Q Consensus 1 L~~~a~~l~~~~~~l~~~~~~etGk~-~~e~~~~ei~~~~~~l~~~a~~~~~~~~~~~-~~---~~~~~~~~~~~P~Gvv 75 (414)
|+++++.|++|+++|++++++|+||+ ..++...|+..+++.+++++....+..+... .. ..+...+++++|+|||
T Consensus 26 L~~~a~~l~~~~~el~~~~~~e~Gk~~~~ea~~~ev~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv 105 (434)
T cd07133 26 LDRLKALLLDNQDALAEAISADFGHRSRHETLLAEILPSIAGIKHARKHLKKWMKPSRRHVGLLFLPAKAEVEYQPLGVV 105 (434)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHHHHHHHHHHHHhCCcccCCccccCCCceEEEEecccEE
Confidence 57899999999999999999999985 5665556999999999999987765433321 11 1234578899999999
Q ss_pred EEEcCCccchHHHHHhHHHHHhhCCeEEeecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhhHHHhhhCCCccEEE
Q 015042 76 GHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLTALYYAHLAKLAGIPDGVLNVVPGFGPTAGAAICSHMDIDYVC 155 (414)
Q Consensus 76 ~~i~p~n~P~~~~~~~~~~aLaaGN~vv~kps~~~~~~~~~l~~~l~~aG~p~g~v~~v~~~~~~~~~~l~~~~~v~~v~ 155 (414)
++|+|||||+...++++++||++||+||+|||+.+|.++..+.++|.++ +|+|+++++++ +.+.++.|+.|+ +|.|+
T Consensus 106 ~~I~pwN~P~~~~~~~~~~ALaaGN~vvlKps~~~p~~~~~l~~l~~~a-lP~g~~~~v~g-~~~~~~~l~~~~-v~~V~ 182 (434)
T cd07133 106 GIIVPWNYPLYLALGPLIAALAAGNRVMIKPSEFTPRTSALLAELLAEY-FDEDEVAVVTG-GADVAAAFSSLP-FDHLL 182 (434)
T ss_pred EEEcCCchHHHHHHHHHHHHHHcCCEEEEECCCcChHHHHHHHHHHHHh-CCcCeEEEEeC-ChHHHHHHHhCC-CCEEE
Confidence 9999999999999999999999999999999999999999999999997 99999999998 557788888766 99999
Q ss_pred EeCCcHHHHHHHHHHHhcccceeEEEcCCCCCceEcCCCCHHHHHHHHHHHhhccCCCCcccCceEEEeCchHHHHHHHH
Q 015042 156 FTGSTDVGRLVMQAAAASNLKQVSLELGGKSPLLIFDDADLDTAADVALLGNLYNKGEICVASSRVFVQEGIYDKFEKKL 235 (414)
Q Consensus 156 ~tGs~~~g~~i~~~~a~~~~~~~~~e~gg~~~~iV~~dadl~~aa~~i~~~~~~~~Gq~C~a~~~i~V~~~i~d~f~~~l 235 (414)
||||..+|+.|++.++ .+++|+++|+|||||+||++|||++.|++.+++++|.|+||.|+++++||||++++|+|+++|
T Consensus 183 ftGs~~~g~~v~~~aa-~~~~~~~lElgGk~~~iV~~dadl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~~~f~~~l 261 (434)
T cd07133 183 FTGSTAVGRHVMRAAA-ENLTPVTLELGGKSPAIIAPDADLAKAAERIAFGKLLNAGQTCVAPDYVLVPEDKLEEFVAAA 261 (434)
T ss_pred EeCchHHHHHHHHHHH-hcCceEEEEccCCCcEEEeCCCCHHHHHHHHHHHHhccCCCcccCCCEEEEcHHHHHHHHHHH
Confidence 9999999999999988 889999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhhcccCCCCCCCCcccccCCHHHHHHHHHHHHHHHHcCCEEEeCCcccC--CCCceeeeEEEeeCCCcccccccce
Q 015042 236 LEKAKAWLVGDPFDPTVRQGPQISERHFDRILSYIEHGKREGATLLTGGKPIG--DKGYYIEPTIFTNVKEDMIIAKEEI 313 (414)
Q Consensus 236 ~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~--~~g~~~~Ptvl~~~~~~~~~~~~E~ 313 (414)
+++++++++|+ ++++++||++++.+++++++++++++.+|+++++||.... .+|+|++|||+.+++++|.+++||+
T Consensus 262 ~~~~~~~~~g~--~~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~v~~gg~~~~~~~~g~~~~Ptvl~~~~~~~~i~~eE~ 339 (434)
T cd07133 262 KAAVAKMYPTL--ADNPDYTSIINERHYARLQGLLEDARAKGARVIELNPAGEDFAATRKLPPTLVLNVTDDMRVMQEEI 339 (434)
T ss_pred HHHHHHhcCCC--CCCCCcCCCCCHHHHHHHHHHHHHHHhCCCEEEecCCCCcCCCCCcEEeeEEEeCCCCCCccccccc
Confidence 99999999886 4678999999999999999999999999999999987643 3689999999999999999999999
Q ss_pred ecceEEEEeeCCHHHHHHHhhcCCCCceEEEecCCHHHHHHHHHhcceeEEEEcCcCC--CCCCCCcccCCCCCCCccch
Q 015042 314 FGPVMALMKFKTVEEAIKSANNTQYGLAAGIVTKDLNVANTVSRSIRAGIIWINCYFG--FSMDCPYGGYKMSGFGREYG 391 (414)
Q Consensus 314 fgPvl~v~~~~~~~eai~~~n~~~~gl~~sv~s~d~~~~~~~~~~l~~g~v~iN~~~~--~~~~~p~gG~~~sG~g~~~g 391 (414)
||||++|++|+|.+|||+++|+++|||++||||+|.+.++++++++++|.|+||++.. ..+.+||||+|.||+|+++|
T Consensus 340 FgPvl~v~~~~~~~eai~~~n~~~~gL~~~v~t~d~~~a~~~~~~l~~G~v~iN~~~~~~~~~~~PfGG~k~SG~G~~~g 419 (434)
T cd07133 340 FGPILPILTYDSLDEAIDYINARPRPLALYYFGEDKAEQDRVLRRTHSGGVTINDTLLHVAQDDLPFGGVGASGMGAYHG 419 (434)
T ss_pred CCCeeEEEEeCCHHHHHHHHhCCCCCceEEEECCCHHHHHHHHHhCCcceEEECCcccccCCCCCCcCCCCcccCCCcCC
Confidence 9999999999999999999999999999999999999999999999999999998764 44789999999999999999
Q ss_pred HHHHHhhheeeEEE
Q 015042 392 LESLYKYLQIKSVV 405 (414)
Q Consensus 392 ~~~~~~~~~~k~i~ 405 (414)
.+|+++||++|+|+
T Consensus 420 ~~~~~~ft~~k~v~ 433 (434)
T cd07133 420 KEGFLTFSHAKPVF 433 (434)
T ss_pred HHHHHHhcccceec
Confidence 99999999999874
|
Coniferyl aldehyde dehydrogenase (CALDH, EC=1.2.1.68) of Pseudomonas sp. strain HR199 (CalB) which catalyzes the NAD+-dependent oxidation of coniferyl aldehyde to ferulic acid, and similar sequences, are present in this CD. |
| >TIGR03240 arg_catab_astD succinylglutamic semialdehyde dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.4e-83 Score=652.73 Aligned_cols=404 Identities=30% Similarity=0.444 Sum_probs=370.5
Q ss_pred CHHHHHHHHHhHHHHHHHHHHhcCCChHHHhhchHHHHHHHHHHHHHhhhhhcCcccccCCCcccceeecCCceEEEEcC
Q 015042 1 MWKFADLIEEHVEELAALDALDAGKVYLRAKTAEIPGAAEFLRFFAGAADKIHGEVLKMSSELQGYTLREPVGVVGHIIP 80 (414)
Q Consensus 1 L~~~a~~l~~~~~~l~~~~~~etGk~~~e~~~~ei~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p 80 (414)
|+++++.|++|+++|++++++|+|||..++. .|+..+++.+++++.......+.......+...+.+++|+|||++|+|
T Consensus 63 L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a~-~ev~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~P~GVv~~I~P 141 (484)
T TIGR03240 63 VQRFAALLEERKEALARVIARETGKPLWETR-TEVASMIGKVAISIKAYHERTGESENPMPDGRAVLRHRPHGVVAVFGP 141 (484)
T ss_pred HHHHHHHHHHhHHHHHHHHHHHcCCCHHHHH-HHHHHHHHHHHHHHHHHHHhcCccccCCCCceeEEEEecccEEEEECC
Confidence 5789999999999999999999999999764 699999999998887765554433221223456788999999999999
Q ss_pred CccchHHHHHhHHHHHhhCCeEEeecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhhHHHhhhCCCccEEEEeCCc
Q 015042 81 WNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLTALYYAHLAKLAGIPDGVLNVVPGFGPTAGAAICSHMDIDYVCFTGST 160 (414)
Q Consensus 81 ~n~P~~~~~~~~~~aLaaGN~vv~kps~~~~~~~~~l~~~l~~aG~p~g~v~~v~~~~~~~~~~l~~~~~v~~v~~tGs~ 160 (414)
||||+...++++++||++||+||+|||+.+|+++..+.+++.++|+|+|+++++++ +.+.++.|+.||++|.|.||||+
T Consensus 142 wN~P~~~~~~~i~~ALaaGN~VVlKPs~~tp~t~~~l~~~~~~aGlP~gvv~~v~g-~~~~~~~L~~~~~vd~V~fTGS~ 220 (484)
T TIGR03240 142 YNFPGHLPNGHIVPALLAGNTVVFKPSELTPWVAEETVKLWEKAGLPAGVLNLVQG-ARETGVALAAHPDIDGLLFTGSS 220 (484)
T ss_pred CchHHHHHHHHHHHHHHcCCEEEEECCccccHHHHHHHHHHHHhCcCcccEEEEeC-CHHHHHHHhcCCCCCEEEEECCH
Confidence 99999999999999999999999999999999999999999999999999999998 66789999999999999999999
Q ss_pred HHHHHHHHHHHhcccceeEEEcCCCCCceEcCCCCHHHHHHHHHHHhhccCCCCcccCceEEEeCchH-HHHHHHHHHHH
Q 015042 161 DVGRLVMQAAAASNLKQVSLELGGKSPLLIFDDADLDTAADVALLGNLYNKGEICVASSRVFVQEGIY-DKFEKKLLEKA 239 (414)
Q Consensus 161 ~~g~~i~~~~a~~~~~~~~~e~gg~~~~iV~~dadl~~aa~~i~~~~~~~~Gq~C~a~~~i~V~~~i~-d~f~~~l~~~~ 239 (414)
.+|+.|++.++....+++++|+|||||+||++|||++.|++.+++++|.|+||.|+++++||||++++ |+|+++|.+.+
T Consensus 221 ~~G~~i~~~aa~~~~~~~~lElGGk~p~iV~~dADl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~~~~d~f~~~l~~~~ 300 (484)
T TIGR03240 221 NTGHLLHRQFAGRPEKILALEMGGNNPLIVDEVADIDAAVHLIIQSAFISAGQRCTCARRLLVPDGAQGDAFLARLVEVA 300 (484)
T ss_pred HHHHHHHHHhhhcCCCcEEEECCCCCeEEECCCCCHHHHHHHHHHHHHhcCCCCCcCCcEEEEeccccHHHHHHHHHHHH
Confidence 99999999876344688999999999999999999999999999999999999999999999999984 99999999999
Q ss_pred hhcccCCC-CCCCCcccccCCHHHHHHHHHHHHHHHHcCCEEEeCCcccCCCCceeeeEEEeeCCCcccccccceecceE
Q 015042 240 KAWLVGDP-FDPTVRQGPQISERHFDRILSYIEHGKREGATLLTGGKPIGDKGYYIEPTIFTNVKEDMIIAKEEIFGPVM 318 (414)
Q Consensus 240 ~~~~~g~~-~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl 318 (414)
+++++|+| .++++++||+++..+++++.+++++++++|+++++||...++.++|++|||+ +++++|.+++||+||||+
T Consensus 301 ~~~~~g~~~~~~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~~~~gg~~~~~~~~~i~PTvl-~v~~~~~i~~eE~FGPVl 379 (484)
T TIGR03240 301 ERLTVGAWDAEPQPFMGAVISLQAAQRLLAAQAKLLALGGKSLLAMRQLDPGAALLTPGII-DVTGVAELPDEEHFGPLL 379 (484)
T ss_pred HhcccCCCCcCCCCcccccCCHHHHHHHHHHHHHHHHCCCEEEeCCCcCCCCCEEEcCEEE-ccCCCCHHHhCCCcCCeE
Confidence 99999997 5778899999999999999999999999999999988765456899999999 689999999999999999
Q ss_pred EEEeeCCHHHHHHHhhcCCCCceEEEecCCHHHHHHHHHhcceeEEEEcCcCC-CCCCCCcccCCCCCCCccchHHHHHh
Q 015042 319 ALMKFKTVEEAIKSANNTQYGLAAGIVTKDLNVANTVSRSIRAGIIWINCYFG-FSMDCPYGGYKMSGFGREYGLESLYK 397 (414)
Q Consensus 319 ~v~~~~~~~eai~~~n~~~~gl~~sv~s~d~~~~~~~~~~l~~g~v~iN~~~~-~~~~~p~gG~~~sG~g~~~g~~~~~~ 397 (414)
+|++|+|++|||+++|+++|||++||||+|.+.++++++++++|.|+||+... ..+.+||||+|.||+|+++|.++++
T Consensus 380 ~v~~~~~~~eai~~~n~~~~gL~~~v~t~d~~~a~~~~~~l~aG~v~iN~~~~~~~~~~pfGG~~~SG~g~~~g~~~~~- 458 (484)
T TIGR03240 380 QVIRYDDFDEAIAIANNTRFGLSAGLLSDDRELYDRFLLEIRAGIVNWNKPLTGASSAAPFGGIGASGNHRPSAYYAAD- 458 (484)
T ss_pred EEEEeCCHHHHHHHHhCCCCCceEEEEcCCHHHHHHHHHhCCcceEEEECCCCCCCCCCCcCCcccccCCCCCchHHHh-
Confidence 99999999999999999999999999999999999999999999999998755 4467899999999999999977665
Q ss_pred hheeeEEEeeC
Q 015042 398 YLQIKSVVTPI 408 (414)
Q Consensus 398 ~~~~k~i~~~~ 408 (414)
|++.|+++++.
T Consensus 459 ~~~~~~~~~~~ 469 (484)
T TIGR03240 459 YCAYPVASLEA 469 (484)
T ss_pred heeeeEEEEec
Confidence 99999998874
|
Members of this protein family are succinylglutamic semialdehyde dehydrogenase (EC 1.2.1.71), the fourth enzyme in the arginine succinyltransferase (AST) pathway for arginine catabolism. |
| >cd07125 ALDH_PutA-P5CDH Delta(1)-pyrroline-5-carboxylate dehydrogenase, PutA | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.4e-83 Score=654.99 Aligned_cols=404 Identities=33% Similarity=0.481 Sum_probs=374.4
Q ss_pred CHHHHHHHHHhHHHHHHHHHHhcCCChHHHhhchHHHHHHHHHHHHHhhhhhcCcc-cccCCCcccceeecCCceEEEEc
Q 015042 1 MWKFADLIEEHVEELAALDALDAGKVYLRAKTAEIPGAAEFLRFFAGAADKIHGEV-LKMSSELQGYTLREPVGVVGHII 79 (414)
Q Consensus 1 L~~~a~~l~~~~~~l~~~~~~etGk~~~e~~~~ei~~~~~~l~~~a~~~~~~~~~~-~~~~~~~~~~~~~~P~Gvv~~i~ 79 (414)
|+++++.|++++++|++++++|+|||..++. .|+..+++.+++++..+++..+.. .+...+...+.+++|+|||++|+
T Consensus 97 L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~-~ev~~~i~~l~~~~~~~~~~~~~~~~~~~~g~~~~~~~~P~GVV~~I~ 175 (518)
T cd07125 97 LEKAADLLEANRGELIALAAAEAGKTLADAD-AEVREAIDFCRYYAAQARELFSDPELPGPTGELNGLELHGRGVFVCIS 175 (518)
T ss_pred HHHHHHHHHHhHHHHHHHHHHHcCCCHHHHH-HHHHHHHHHHHHHHHHHHHhcCCccccCCCCceeEEEEecccEEEEEC
Confidence 5789999999999999999999999999864 699999999999998887654432 33334556789999999999999
Q ss_pred CCccchHHHHHhHHHHHhhCCeEEeecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhhHHHhhhCCCccEEEEeCC
Q 015042 80 PWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLTALYYAHLAKLAGIPDGVLNVVPGFGPTAGAAICSHMDIDYVCFTGS 159 (414)
Q Consensus 80 p~n~P~~~~~~~~~~aLaaGN~vv~kps~~~~~~~~~l~~~l~~aG~p~g~v~~v~~~~~~~~~~l~~~~~v~~v~~tGs 159 (414)
|||||+...++++++||++||+||+|||+.+|+++..+.+++.++|+|+|+++++++++.+.++.|+.|+++|.|.||||
T Consensus 176 p~N~P~~~~~~~i~~ALaaGN~VVlKps~~tp~~~~~l~~ll~eaGlP~gvv~vv~g~~~~~~~~L~~~~~vd~V~ftGs 255 (518)
T cd07125 176 PWNFPLAIFTGQIAAALAAGNTVIAKPAEQTPLIAARAVELLHEAGVPRDVLQLVPGDGEEIGEALVAHPRIDGVIFTGS 255 (518)
T ss_pred CcchHHHHHHHHHHHHHHcCCEEEEeCCCcCcHHHHHHHHHHHHcCCCCCcEEEEecCchhhHHHHhcCCCcCEEEEECC
Confidence 99999999999999999999999999999999999999999999999999999999966668899999999999999999
Q ss_pred cHHHHHHHHHHHhcc---cceeEEEcCCCCCceEcCCCCHHHHHHHHHHHhhccCCCCcccCceEEEeCchHHHHHHHHH
Q 015042 160 TDVGRLVMQAAAASN---LKQVSLELGGKSPLLIFDDADLDTAADVALLGNLYNKGEICVASSRVFVQEGIYDKFEKKLL 236 (414)
Q Consensus 160 ~~~g~~i~~~~a~~~---~~~~~~e~gg~~~~iV~~dadl~~aa~~i~~~~~~~~Gq~C~a~~~i~V~~~i~d~f~~~l~ 236 (414)
+.+|+.|++.++ .+ ++|+++|+|||||+||++|||++.|++.+++++|.|+||.|+++++||||++++|+|+++|+
T Consensus 256 ~~~g~~i~~~aa-~~~~~~~~v~lElgGk~p~iV~~dADl~~Aa~~iv~g~f~nsGQ~C~a~~rv~V~~~i~d~f~~~l~ 334 (518)
T cd07125 256 TETAKLINRALA-ERDGPILPLIAETGGKNAMIVDSTALPEQAVKDVVQSAFGSAGQRCSALRLLYLQEEIAERFIEMLK 334 (518)
T ss_pred HHHHHHHHHHhh-hccCCCceEEEEcCCCCeEEECCCCCHHHHHHHHHHHHHhcCCCCCCCCeEEEEcchhHHHHHHHHH
Confidence 999999999876 33 78999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhhcccCCCCCCCCcccccCCHHHHHHHHHHHHHHHHcCCEEEeCCcccCCCCceeeeEEEeeCCCcccccccceecc
Q 015042 237 EKAKAWLVGDPFDPTVRQGPQISERHFDRILSYIEHGKREGATLLTGGKPIGDKGYYIEPTIFTNVKEDMIIAKEEIFGP 316 (414)
Q Consensus 237 ~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgP 316 (414)
++++++++|+|.++++.+||++++.+++++++++++++. ++++++||......|+|+.|||+.++ +|.+++||+|||
T Consensus 335 ~~~~~~~~g~p~~~~~~~gpli~~~~~~~v~~~i~~a~~-~~~vl~gg~~~~~~g~~~~Ptvl~~v--~~~i~~eE~FgP 411 (518)
T cd07125 335 GAMASLKVGDPWDLSTDVGPLIDKPAGKLLRAHTELMRG-EAWLIAPAPLDDGNGYFVAPGIIEIV--GIFDLTTEVFGP 411 (518)
T ss_pred HHHhcCCccCCCCCCCCcCCCcCHHHHHHHHHHHHHHHh-CCEEEeCCCcCCCCCeEEccEEEeec--CChHhhCcccCC
Confidence 999999999999999999999999999999999999987 46899998754336999999999887 899999999999
Q ss_pred eEEEEeeC--CHHHHHHHhhcCCCCceEEEecCCHHHHHHHHHhcceeEEEEcCcCC--CCCCCCcccCCCCCCCc-cch
Q 015042 317 VMALMKFK--TVEEAIKSANNTQYGLAAGIVTKDLNVANTVSRSIRAGIIWINCYFG--FSMDCPYGGYKMSGFGR-EYG 391 (414)
Q Consensus 317 vl~v~~~~--~~~eai~~~n~~~~gl~~sv~s~d~~~~~~~~~~l~~g~v~iN~~~~--~~~~~p~gG~~~sG~g~-~~g 391 (414)
|++|++|+ |++|||+++|+++|||++||||+|.+.++++++++++|+|+||++.. ..+.+||||+|.||+|+ ++|
T Consensus 412 Vl~v~~~~~~~~deAi~~~n~~~~gLta~Vft~d~~~~~~~~~~l~~G~V~IN~~~~~~~~~~~PfGG~~~SG~G~~~gg 491 (518)
T cd07125 412 ILHVIRFKAEDLDEAIEDINATGYGLTLGIHSRDEREIEYWRERVEAGNLYINRNITGAIVGRQPFGGWGLSGTGPKAGG 491 (518)
T ss_pred eEEEEEeCCCCHHHHHHHHhCCCCCceEEEEeCCHHHHHHHHHhCCcCeEEECCCCCCCCCCCCCCCCcccccCCccccc
Confidence 99999999 99999999999999999999999999999999999999999998765 33678999999999995 788
Q ss_pred HHHHHhhheeeEEEeeCC
Q 015042 392 LESLYKYLQIKSVVTPIY 409 (414)
Q Consensus 392 ~~~~~~~~~~k~i~~~~~ 409 (414)
++++++||+.|+|+++..
T Consensus 492 ~~~~~~ft~~k~i~~~~~ 509 (518)
T cd07125 492 PNYLLRFGNEKTVSLNTT 509 (518)
T ss_pred HHHHHHhcceEEEEEEcc
Confidence 999999999999988753
|
The proline catabolic enzymes of the aldehyde dehydrogenase (ALDH) protein superfamily, proline dehydrogenase and Delta(1)-pyrroline-5-carboxylate dehydrogenase (P5CDH, (EC=1.5.1.12 )), catalyze the two-step oxidation of proline to glutamate; P5CDH catalyzes the oxidation of glutamate semialdehyde, utilizing NAD+ as the electron acceptor. In some bacteria, the two enzymes are fused into the bifunctional flavoenzyme, proline utilization A (PutA) These enzymes play important roles in cellular redox control, superoxide generation, and apoptosis. In certain prokaryotes such as Escherichia coli, PutA is also a transcriptional repressor of the proline utilization genes. |
| >cd07128 ALDH_MaoC-N N-terminal domain of the monoamine oxidase C dehydratase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.9e-83 Score=651.25 Aligned_cols=399 Identities=26% Similarity=0.325 Sum_probs=359.8
Q ss_pred CHHHHHHHHHhHHHHHHHHHHhcCCChHHHhhchHHHHHHHHHHHHHhhhhhcC--------cccccCC-C-cccceeec
Q 015042 1 MWKFADLIEEHVEELAALDALDAGKVYLRAKTAEIPGAAEFLRFFAGAADKIHG--------EVLKMSS-E-LQGYTLRE 70 (414)
Q Consensus 1 L~~~a~~l~~~~~~l~~~~~~etGk~~~e~~~~ei~~~~~~l~~~a~~~~~~~~--------~~~~~~~-~-~~~~~~~~ 70 (414)
|+++++.|++|+++|+++ ++|+|||..++. .|+..+++.+++++.++++..+ +..+... + ...+++++
T Consensus 65 L~~~a~~l~~~~~~la~l-~~e~Gkp~~ea~-~Ev~~~~~~~~~~a~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 142 (513)
T cd07128 65 LKALAKYLMERKEDLYAL-SAATGATRRDSW-IDIDGGIGTLFAYASLGRRELPNAHFLVEGDVEPLSKDGTFVGQHILT 142 (513)
T ss_pred HHHHHHHHHHHHHHHHHH-HHHcCCCHHHHH-HHHHHHHHHHHHHHHHHHhhccccccccCCcccccCCCccccceEEEE
Confidence 578999999999999996 999999998764 6999999999999998766532 2222111 1 13567899
Q ss_pred C-CceEEEEcCCccchHHHHHhHHHHHhhCCeEEeecCCCChHHHHHHHHHHHHcC-CCCCcEEEEeCCchhhHHHhhhC
Q 015042 71 P-VGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLTALYYAHLAKLAG-IPDGVLNVVPGFGPTAGAAICSH 148 (414)
Q Consensus 71 P-~Gvv~~i~p~n~P~~~~~~~~~~aLaaGN~vv~kps~~~~~~~~~l~~~l~~aG-~p~g~v~~v~~~~~~~~~~l~~~ 148 (414)
| +|||++|+|||||++..++++++||++||+||+|||+.+|+++..+.+++.++| +|+|++|++++++.++++.+
T Consensus 143 P~~GVv~~I~pwN~P~~~~~~~~~~ALaaGN~VVlKPs~~tp~~~~~l~~~~~eaG~lP~gv~~~v~g~~~~~~~~l--- 219 (513)
T cd07128 143 PRRGVAVHINAFNFPVWGMLEKFAPALLAGVPVIVKPATATAYLTEAVVKDIVESGLLPEGALQLICGSVGDLLDHL--- 219 (513)
T ss_pred ecccEEEEECCcccHHHHHHHHHHHHHHcCCEEEEECCCCCCHHHHHHHHHHHHhCCCCCCcEEEecCChHHHhccc---
Confidence 9 599999999999999999999999999999999999999999999999999999 89999999998543333332
Q ss_pred CCccEEEEeCCcHHHHHHHHHHH-hcccceeEEEcCCCCCceEcCCCC-----HHHHHHHHHHHhhccCCCCcccCceEE
Q 015042 149 MDIDYVCFTGSTDVGRLVMQAAA-ASNLKQVSLELGGKSPLLIFDDAD-----LDTAADVALLGNLYNKGEICVASSRVF 222 (414)
Q Consensus 149 ~~v~~v~~tGs~~~g~~i~~~~a-~~~~~~~~~e~gg~~~~iV~~dad-----l~~aa~~i~~~~~~~~Gq~C~a~~~i~ 222 (414)
+.+|+|.||||+.+|+.|++.++ ..+++|+++|+|||||+||++||| ++.+++.+++++|.|+||.|++++|||
T Consensus 220 ~~~d~v~fTGS~~~G~~i~~~a~~a~~~~~~~lElGGknp~IV~~DAd~~~~dld~aa~~iv~~~f~~aGQ~C~a~~rv~ 299 (513)
T cd07128 220 GEQDVVAFTGSAATAAKLRAHPNIVARSIRFNAEADSLNAAILGPDATPGTPEFDLFVKEVAREMTVKAGQKCTAIRRAF 299 (513)
T ss_pred CCCCEEEEECCHHHHHHHHHHhhhhccCceEEEeccCcCcEEECCCCCcchhhHHHHHHHHHHHHHHhcCCcccCCceEE
Confidence 57899999999999999998752 378899999999999999999999 999999999999999999999999999
Q ss_pred EeCchHHHHHHHHHHHHhhcccCCCCCCCCcccccCCHHHHHHHHHHHHHHHHcCCEEEeCCccc-------CCCCceee
Q 015042 223 VQEGIYDKFEKKLLEKAKAWLVGDPFDPTVRQGPQISERHFDRILSYIEHGKREGATLLTGGKPI-------GDKGYYIE 295 (414)
Q Consensus 223 V~~~i~d~f~~~l~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ga~v~~gg~~~-------~~~g~~~~ 295 (414)
||+++||+|+++|+++++++++|+|.++++++||++++.++++++++++++++. +++++||... ...|+|++
T Consensus 300 V~~~i~d~f~~~l~~~~~~l~~G~p~~~~~~lGpli~~~~~~~i~~~i~~a~~~-A~vl~GG~~~~~~~~~~~~~g~~~~ 378 (513)
T cd07128 300 VPEARVDAVIEALKARLAKVVVGDPRLEGVRMGPLVSREQREDVRAAVATLLAE-AEVVFGGPDRFEVVGADAEKGAFFP 378 (513)
T ss_pred EehHHHHHHHHHHHHHHHhcccCCCccCCCCcCCCCCHHHHHHHHHHHHHHHhC-CEEEECCCccccccCCCCCCCEEEC
Confidence 999999999999999999999999999999999999999999999999999988 9999999653 13589999
Q ss_pred eEEEeeCCCc--ccccccceecceEEEEeeCCHHHHHHHhhcCCCCceEEEecCCHHHHHHHHHhcc--eeEEEEcCcCC
Q 015042 296 PTIFTNVKED--MIIAKEEIFGPVMALMKFKTVEEAIKSANNTQYGLAAGIVTKDLNVANTVSRSIR--AGIIWINCYFG 371 (414)
Q Consensus 296 Ptvl~~~~~~--~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~sv~s~d~~~~~~~~~~l~--~g~v~iN~~~~ 371 (414)
|||+.+++++ |.+++||+||||++|++|+|++||++++|+++|||++||||+|.+.+++++++++ +|+|+||+...
T Consensus 379 PTvl~~v~~~~~~~i~~eE~FGPVl~V~~~~~~deai~~aN~~~~gL~asvft~d~~~~~~~~~~l~~~~G~v~IN~~~~ 458 (513)
T cd07128 379 PTLLLCDDPDAATAVHDVEAFGPVATLMPYDSLAEAIELAARGRGSLVASVVTNDPAFARELVLGAAPYHGRLLVLNRDS 458 (513)
T ss_pred CEEEeccCCcccchHHhCCCcCCeEEEEeeCCHHHHHHHHhcCCCCeeEEEEeCCHHHHHHHHHHHHhhCCEEEEcCCcc
Confidence 9999988874 8999999999999999999999999999999999999999999999999999997 99999998642
Q ss_pred ---------CCCCCCcccCCCCCCCccc-hHHHHHhhheeeEEE
Q 015042 372 ---------FSMDCPYGGYKMSGFGREY-GLESLYKYLQIKSVV 405 (414)
Q Consensus 372 ---------~~~~~p~gG~~~sG~g~~~-g~~~~~~~~~~k~i~ 405 (414)
..+.+||||+|.||+|++. |.+|+++|++.|+|.
T Consensus 459 ~~~~~~~~~~~~~~pfGG~k~SG~G~~~gg~~~l~~~~~~k~v~ 502 (513)
T cd07128 459 AKESTGHGSPLPQLVHGGPGRAGGGEELGGLRGVKHYMQRTAVQ 502 (513)
T ss_pred ccccccccCCCCCCCCCCcccCCCCcccccHHHHHHhheeeeee
Confidence 2357899999999999984 799999999999974
|
The N-terminal domain of the MaoC dehydratase, a monoamine oxidase regulatory protein. Orthologs of MaoC include PaaZ (Escherichia coli) and PaaN (Pseudomonas putida), which are putative ring-opening enzymes of the aerobic phenylacetic acid (PA) catabolic pathway. The C-terminal domain of MaoC has sequence similarity to enoyl-CoA hydratase. Also included in this CD is a novel Burkholderia xenovorans LB400 ALDH of the aerobic benzoate oxidation (box) pathway. This pathway involves first the synthesis of a CoA thio-esterified aromatic acid, with subsequent dihydroxylation and cleavage steps, yielding the CoA thio-esterified aliphatic aldehyde, 3,4-dehydroadipyl-CoA semialdehyde, which is further converted into its corresponding CoA acid by the Burkholderia LB400 ALDH. |
| >cd07134 ALDH_AlkH-like Pseudomonas putida Aldehyde dehydrogenase AlkH-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.2e-83 Score=641.33 Aligned_cols=400 Identities=31% Similarity=0.442 Sum_probs=371.4
Q ss_pred CHHHHHHHHHhHHHHHHHHHHhcCCChHHHhhchHHHHHHHHHHHHHhhhhhcCc-ccccC---CCcccceeecCCceEE
Q 015042 1 MWKFADLIEEHVEELAALDALDAGKVYLRAKTAEIPGAAEFLRFFAGAADKIHGE-VLKMS---SELQGYTLREPVGVVG 76 (414)
Q Consensus 1 L~~~a~~l~~~~~~l~~~~~~etGk~~~e~~~~ei~~~~~~l~~~a~~~~~~~~~-~~~~~---~~~~~~~~~~P~Gvv~ 76 (414)
|+++++.|++|+++|++++++|+|||..++...|+..+++.+++++......... ..... .+...+++++|+|||+
T Consensus 26 L~~~a~~l~~~~~el~~~~~~e~Gk~~~ea~~~ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~ 105 (433)
T cd07134 26 LKRLKKAILARREEIIAALAADFRKPAAEVDLTEILPVLSEINHAIKHLKKWMKPKRVRTPLLLFGTKSKIRYEPKGVCL 105 (433)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhCCcccCCccccCCCceEEEEecCCEEE
Confidence 5789999999999999999999999999865579999999999998776543222 12111 2446789999999999
Q ss_pred EEcCCccchHHHHHhHHHHHhhCCeEEeecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhhHHHhhhCCCccEEEE
Q 015042 77 HIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLTALYYAHLAKLAGIPDGVLNVVPGFGPTAGAAICSHMDIDYVCF 156 (414)
Q Consensus 77 ~i~p~n~P~~~~~~~~~~aLaaGN~vv~kps~~~~~~~~~l~~~l~~aG~p~g~v~~v~~~~~~~~~~l~~~~~v~~v~~ 156 (414)
+|+|||||++.+++++++||++||+||+|||+.+|.++..+.+++.++ +|+|+++++++ +.+.+..|+.|+ ++.|.|
T Consensus 106 ~i~p~N~P~~~~~~~~~~ALaaGN~Vi~Kps~~~p~~~~~~~~~~~~a-~p~g~v~~v~g-~~~~~~~l~~~~-v~~v~f 182 (433)
T cd07134 106 IISPWNYPFNLAFGPLVSAIAAGNTAILKPSELTPHTSAVIAKIIREA-FDEDEVAVFEG-DAEVAQALLELP-FDHIFF 182 (433)
T ss_pred EEcCCchHHHHHHHHHHHHHHcCCEEEEECCccCHHHHHHHHHHHHHh-CCcCEEEEEeC-ChhHHHHHHhCC-CCEEEE
Confidence 999999999999999999999999999999999999999999999999 99999999998 567889999998 999999
Q ss_pred eCCcHHHHHHHHHHHhcccceeEEEcCCCCCceEcCCCCHHHHHHHHHHHhhccCCCCcccCceEEEeCchHHHHHHHHH
Q 015042 157 TGSTDVGRLVMQAAAASNLKQVSLELGGKSPLLIFDDADLDTAADVALLGNLYNKGEICVASSRVFVQEGIYDKFEKKLL 236 (414)
Q Consensus 157 tGs~~~g~~i~~~~a~~~~~~~~~e~gg~~~~iV~~dadl~~aa~~i~~~~~~~~Gq~C~a~~~i~V~~~i~d~f~~~l~ 236 (414)
|||..+|+.|++.++ ..++|+++|+|||||+||++|||++.|++.+++++|.++||.|+++++||||++++|+|+++|+
T Consensus 183 tGs~~~g~~i~~~aa-~~~~~~~lelgG~~~~iV~~dAD~~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~v~d~f~~~L~ 261 (433)
T cd07134 183 TGSPAVGKIVMAAAA-KHLASVTLELGGKSPTIVDETADLKKAAKKIAWGKFLNAGQTCIAPDYVFVHESVKDAFVEHLK 261 (433)
T ss_pred ECChHHHHHHHHHHH-hcCCcEEEEccCCCcEEECCCCCHHHHHHHHHHHhhcCcCCcccCCcEEEECHHHHHHHHHHHH
Confidence 999999999999987 7889999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhhcccCCC-CCCCCcccccCCHHHHHHHHHHHHHHHHcCCEEEeCCcccCCCCceeeeEEEeeCCCcccccccceec
Q 015042 237 EKAKAWLVGDP-FDPTVRQGPQISERHFDRILSYIEHGKREGATLLTGGKPIGDKGYYIEPTIFTNVKEDMIIAKEEIFG 315 (414)
Q Consensus 237 ~~~~~~~~g~~-~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fg 315 (414)
++++++..|+| .+.++++||++++.+++++.+++++++.+|+++++||... .+|+|++|||+.+++++|.+++||+||
T Consensus 262 ~~~~~~~~~~~~~~~~~~~gpli~~~~~~~i~~~i~~a~~~ga~~~~gg~~~-~~g~~~~Ptvl~~~~~~~~~~~eE~Fg 340 (433)
T cd07134 262 AEIEKFYGKDAARKASPDLARIVNDRHFDRLKGLLDDAVAKGAKVEFGGQFD-AAQRYIAPTVLTNVTPDMKIMQEEIFG 340 (433)
T ss_pred HHHHHHcCCCCCcCCCCccCCcCCHHHHHHHHHHHHHHHhCCCEEEeCCCcC-CCCCEEeeEEEeCCCCccHHHhccccC
Confidence 99999988887 7889999999999999999999999999999999999764 358999999999999999999999999
Q ss_pred ceEEEEeeCCHHHHHHHhhcCCCCceEEEecCCHHHHHHHHHhcceeEEEEcCcCC--CCCCCCcccCCCCCCCccchHH
Q 015042 316 PVMALMKFKTVEEAIKSANNTQYGLAAGIVTKDLNVANTVSRSIRAGIIWINCYFG--FSMDCPYGGYKMSGFGREYGLE 393 (414)
Q Consensus 316 Pvl~v~~~~~~~eai~~~n~~~~gl~~sv~s~d~~~~~~~~~~l~~g~v~iN~~~~--~~~~~p~gG~~~sG~g~~~g~~ 393 (414)
||++|++|+|.+|||+++|+++|||++||||+|.+.++++++++++|.|+||+++. ..+.+||||+|+||+|+++|++
T Consensus 341 Pvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~~~PfGG~k~SG~G~~~g~~ 420 (433)
T cd07134 341 PVLPIITYEDLDEVIEYINAKPKPLALYVFSKDKANVNKVLARTSSGGVVVNDVVLHFLNPNLPFGGVNNSGIGSYHGVY 420 (433)
T ss_pred ceEEEEEeCCHHHHHHHHhCCCCCcEEEEECCCHHHHHHHHHhCCcceEEECCcccccCCCCCCCCCcCcccCCCcCcHH
Confidence 99999999999999999999999999999999999999999999999999998765 3478999999999999999999
Q ss_pred HHHhhheeeEEE
Q 015042 394 SLYKYLQIKSVV 405 (414)
Q Consensus 394 ~~~~~~~~k~i~ 405 (414)
++++||+.|+|.
T Consensus 421 ~l~~~~~~k~i~ 432 (433)
T cd07134 421 GFKAFSHERAVL 432 (433)
T ss_pred HHHHhcccceee
Confidence 999999999985
|
Aldehyde dehydrogenase AlkH (locus name P12693, EC=1.2.1.3) of the alkBFGHJKL operon that allows Pseudomonas putida to metabolize alkanes and the aldehyde dehydrogenase AldX of Bacillus subtilis (locus P46329, EC=1.2.1.3), and similar sequences, are present in this CD. |
| >cd07149 ALDH_y4uC Uncharacterized ALDH (y4uC) with similarity to Tortula ruralis aldehyde dehydrogenase ALDH21A1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-82 Score=644.86 Aligned_cols=398 Identities=42% Similarity=0.669 Sum_probs=372.4
Q ss_pred CHHHHHHHHHhHHHHHHHHHHhcCCChHHHhhchHHHHHHHHHHHHHhhhhhcCcccccC-----CCcccceeecCCceE
Q 015042 1 MWKFADLIEEHVEELAALDALDAGKVYLRAKTAEIPGAAEFLRFFAGAADKIHGEVLKMS-----SELQGYTLREPVGVV 75 (414)
Q Consensus 1 L~~~a~~l~~~~~~l~~~~~~etGk~~~e~~~~ei~~~~~~l~~~a~~~~~~~~~~~~~~-----~~~~~~~~~~P~Gvv 75 (414)
|+++++.|.+++++|++++++|+|||..++. .|+..+++.+++++..+.+..++..+.+ .+...+.+++|+|||
T Consensus 49 L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~-~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv 127 (453)
T cd07149 49 LERAAQLLEERREEFARTIALEAGKPIKDAR-KEVDRAIETLRLSAEEAKRLAGETIPFDASPGGEGRIGFTIREPIGVV 127 (453)
T ss_pred HHHHHHHHHHhHHHHHHHHHHHhCcCHHHHH-HHHHHHHHHHHHHHHHHHHhcCccccccccCCCCCeeEEEEeecceEE
Confidence 5789999999999999999999999999865 5999999999999887766544433321 123357889999999
Q ss_pred EEEcCCccchHHHHHhHHHHHhhCCeEEeecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhhHHHhhhCCCccEEE
Q 015042 76 GHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLTALYYAHLAKLAGIPDGVLNVVPGFGPTAGAAICSHMDIDYVC 155 (414)
Q Consensus 76 ~~i~p~n~P~~~~~~~~~~aLaaGN~vv~kps~~~~~~~~~l~~~l~~aG~p~g~v~~v~~~~~~~~~~l~~~~~v~~v~ 155 (414)
++|+|||||+...++++++||++||+||+|||+.+|.++..+.+++.++|+|+|+++++++++.+.++.|+.||++|+|.
T Consensus 128 ~~i~p~N~P~~~~~~~~~~ALaaGN~VI~Kps~~~p~~~~~l~~~l~~ag~P~gvv~~v~g~~~~~~~~l~~~~~v~~V~ 207 (453)
T cd07149 128 AAITPFNFPLNLVAHKVGPAIAAGNAVVLKPASQTPLSALKLAELLLEAGLPKGALNVVTGSGETVGDALVTDPRVRMIS 207 (453)
T ss_pred EEECCCCChHHHHHHHHHHHHHcCCEEEEECCCcchHHHHHHHHHHHHcCcCccceEEeecCchHHHHHHhcCCCCCEEE
Confidence 99999999999999999999999999999999999999999999999999999999999997667789999999999999
Q ss_pred EeCCcHHHHHHHHHHHhcccceeEEEcCCCCCceEcCCCCHHHHHHHHHHHhhccCCCCcccCceEEEeCchHHHHHHHH
Q 015042 156 FTGSTDVGRLVMQAAAASNLKQVSLELGGKSPLLIFDDADLDTAADVALLGNLYNKGEICVASSRVFVQEGIYDKFEKKL 235 (414)
Q Consensus 156 ~tGs~~~g~~i~~~~a~~~~~~~~~e~gg~~~~iV~~dadl~~aa~~i~~~~~~~~Gq~C~a~~~i~V~~~i~d~f~~~l 235 (414)
||||+.+|+.|.+.++ ++|+++|+|||||+||++|+|++.|++.+++++|.++||.|+++++||||++++|+|+++|
T Consensus 208 ftGs~~~g~~i~~~a~---~~~~~lelGGk~p~iV~~dadl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~L 284 (453)
T cd07149 208 FTGSPAVGEAIARKAG---LKKVTLELGSNAAVIVDADADLEKAVERCVSGAFANAGQVCISVQRIFVHEDIYDEFLERF 284 (453)
T ss_pred EECCHHHHHHHHHHcC---CCceeeecCCCceEEECCCCCHHHHHHHHHHHHHHhcCCCCCCCceEEEcHhHHHHHHHHH
Confidence 9999999999998753 6899999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhhcccCCCCCCCCcccccCCHHHHHHHHHHHHHHHHcCCEEEeCCcccCCCCceeeeEEEeeCCCcccccccceec
Q 015042 236 LEKAKAWLVGDPFDPTVRQGPQISERHFDRILSYIEHGKREGATLLTGGKPIGDKGYYIEPTIFTNVKEDMIIAKEEIFG 315 (414)
Q Consensus 236 ~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fg 315 (414)
+++++++++|+|.++++.+||++++.+++++++++++++.+|+++++||.. .|+|+.|||+.++++++.+++||+||
T Consensus 285 ~~~~~~~~~g~p~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ga~v~~gg~~---~g~~~~Ptvl~~~~~~~~~~~~E~fg 361 (453)
T cd07149 285 VAATKKLVVGDPLDEDTDVGPMISEAEAERIEEWVEEAVEGGARLLTGGKR---DGAILEPTVLTDVPPDMKVVCEEVFA 361 (453)
T ss_pred HHHHHhCCcCCCCCCCCccccccCHHHHHHHHHHHHHHHHCCCEEEeCCCC---CCeEEcCEEEeCCCCCCHHHhCCCCC
Confidence 999999999999999999999999999999999999999999999999875 48999999999999999999999999
Q ss_pred ceEEEEeeCCHHHHHHHhhcCCCCceEEEecCCHHHHHHHHHhcceeEEEEcCcCCC-CCCCCcccCCCCCCCccchHHH
Q 015042 316 PVMALMKFKTVEEAIKSANNTQYGLAAGIVTKDLNVANTVSRSIRAGIIWINCYFGF-SMDCPYGGYKMSGFGREYGLES 394 (414)
Q Consensus 316 Pvl~v~~~~~~~eai~~~n~~~~gl~~sv~s~d~~~~~~~~~~l~~g~v~iN~~~~~-~~~~p~gG~~~sG~g~~~g~~~ 394 (414)
||++|++|+|++||++++|+++|||++||||+|.+.++++++++++|+|+||++... .+.+||||+|.||+|+++|++|
T Consensus 362 Pvl~v~~~~~~~eai~~~n~~~~gLt~~v~t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~~pfGG~~~SG~G~~~g~~~ 441 (453)
T cd07149 362 PVVSLNPFDTLDEAIAMANDSPYGLQAGVFTNDLQKALKAARELEVGGVMINDSSTFRVDHMPYGGVKESGTGREGPRYA 441 (453)
T ss_pred ceEEEEEeCCHHHHHHHHhCCCcCceEEEEcCCHHHHHHHHHHcCcCeEEECCCCCCCCCCCCcCCccccccCCCChHHH
Confidence 999999999999999999999999999999999999999999999999999988654 4678999999999999999999
Q ss_pred HHhhheeeEEE
Q 015042 395 LYKYLQIKSVV 405 (414)
Q Consensus 395 ~~~~~~~k~i~ 405 (414)
+++|++.|+|.
T Consensus 442 ~~~~~~~k~~~ 452 (453)
T cd07149 442 IEEMTEIKLVC 452 (453)
T ss_pred HHHhhceeEEe
Confidence 99999999985
|
Uncharacterized aldehyde dehydrogenase (ORF name y4uC) with sequence similarity to the moss Tortula ruralis aldehyde dehydrogenase ALDH21A1 (RNP123) believed to play an important role in the detoxification of aldehydes generated in response to desiccation- and salinity-stress, and similar sequences are included in this CD. |
| >TIGR02278 PaaN-DH phenylacetic acid degradation protein paaN | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.5e-82 Score=661.49 Aligned_cols=400 Identities=24% Similarity=0.287 Sum_probs=361.4
Q ss_pred CHHHHHHHHHhHHHHHHHHHHhcCCChHHHhhchHHHHHHHHHHHHHhhhhhc--------CcccccC-C-Ccccceeec
Q 015042 1 MWKFADLIEEHVEELAALDALDAGKVYLRAKTAEIPGAAEFLRFFAGAADKIH--------GEVLKMS-S-ELQGYTLRE 70 (414)
Q Consensus 1 L~~~a~~l~~~~~~l~~~~~~etGk~~~e~~~~ei~~~~~~l~~~a~~~~~~~--------~~~~~~~-~-~~~~~~~~~ 70 (414)
|+++++.|++|+++|++ +++|+|||+.++ ..|+..+++.+++++..+++.. ++..+.. . +...++.++
T Consensus 65 L~~~a~~l~~~~~ela~-~~~e~GK~~~~a-~~ev~~~~~~~~~~a~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~ 142 (663)
T TIGR02278 65 LKALAQYLSERKEALYA-LAATTGATRRDN-WVDIDGGIGTLFTYSSLGRRELPDANLIPEDEFEPLSKDGSFQGRHILT 142 (663)
T ss_pred HHHHHHHHHHHHHHHHH-HHHHcCCCHHHH-HHHHHHHHHHHHHHHHhhhhhccccccccCCceeccCCCCccceEEEEE
Confidence 57899999999999999 599999999975 4699999999999998876532 2322221 1 124678999
Q ss_pred CC-ceEEEEcCCccchHHHHHhHHHHHhhCCeEEeecCCCChHHHHHHHHHHHHcC-CCCCcEEEEeCCchhhHHHhhhC
Q 015042 71 PV-GVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLTALYYAHLAKLAG-IPDGVLNVVPGFGPTAGAAICSH 148 (414)
Q Consensus 71 P~-Gvv~~i~p~n~P~~~~~~~~~~aLaaGN~vv~kps~~~~~~~~~l~~~l~~aG-~p~g~v~~v~~~~~~~~~~l~~~ 148 (414)
|+ |||++|+|||||+...++++++||++||+||+|||+.+|+++..+.+++.++| +|+|++|++++.. ++.+..+
T Consensus 143 P~~Gvv~~I~pwN~P~~~~~~~~~~ALaaGN~Vv~KPs~~tp~~~~~l~~~~~~aG~lP~gv~~~v~g~~---~~~~~~~ 219 (663)
T TIGR02278 143 PKGGVAVQINAFNFPVWGLLEKFAPAFLAGVPTLAKPATPTAYVAEALVRTMVESGLLPEGSLQLICGSA---GDLLDHL 219 (663)
T ss_pred eCCceEEEEcCCchHHHHHHHHHHHHHHcCCEEEEECCCcchHHHHHHHHHHHHhCCCCCCcEEEEeCCh---HHHHhcC
Confidence 97 99999999999999999999999999999999999999999999999999999 9999999999842 3334344
Q ss_pred CCccEEEEeCCcHHHHHHHHHHH-hcccceeEEEcCCCCCceEcCCCC-----HHHHHHHHHHHhhccCCCCcccCceEE
Q 015042 149 MDIDYVCFTGSTDVGRLVMQAAA-ASNLKQVSLELGGKSPLLIFDDAD-----LDTAADVALLGNLYNKGEICVASSRVF 222 (414)
Q Consensus 149 ~~v~~v~~tGs~~~g~~i~~~~a-~~~~~~~~~e~gg~~~~iV~~dad-----l~~aa~~i~~~~~~~~Gq~C~a~~~i~ 222 (414)
+++|.|.||||..+|+.|++.++ .++++|+++|+|||||+||++||| ++.|++.+++++|.|+||.|++++|||
T Consensus 220 ~~~~~V~FTGS~~~G~~i~~~aaaa~~~~~~~lELGGk~p~IV~~dAd~~~~dl~~aa~~i~~~~f~~sGQ~C~a~~rv~ 299 (663)
T TIGR02278 220 DHRDVVAFTGSAATADRLRAHPNVLERGIRFNAEADSLNAAILGEDATPDEPEFDLFAQEIVRELTIKAGQKCTAIRRVI 299 (663)
T ss_pred CCCCEEEEECCHHHHHHHHHhHhHHhcCceEEEEcCCCCeEEEcCCCCccchhHHHHHHHHHHHHHhcCCCCccCCceEE
Confidence 77899999999999999998642 378899999999999999999999 999999999999999999999999999
Q ss_pred EeCchHHHHHHHHHHHHhhcccCCCCCCCCcccccCCHHHHHHHHHHHHHHHHcCCEEEeCCcccCCCCceeeeEEEeeC
Q 015042 223 VQEGIYDKFEKKLLEKAKAWLVGDPFDPTVRQGPQISERHFDRILSYIEHGKREGATLLTGGKPIGDKGYYIEPTIFTNV 302 (414)
Q Consensus 223 V~~~i~d~f~~~l~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~~~g~~~~Ptvl~~~ 302 (414)
||++++|+|+++|+++++++++|+|.++++++||+++..+++++++++++++++|+++++||... .+|+|++|||+.++
T Consensus 300 V~~~i~d~f~~~l~~~~~~l~vG~p~~~~t~~Gpli~~~~~~~i~~~i~~a~~~Ga~vl~GG~~~-~~g~~~~PTvl~~~ 378 (663)
T TIGR02278 300 VPKALLEAVLKALQARLAKVVLGDPREEGVDMGPLVSLEQRADVEAAVAALLAAGAEVRLGGPGR-LDGAFFPPTLLLAE 378 (663)
T ss_pred EeHHHHHHHHHHHHHHHHhccCCCccccCCCcCCCCCHHHHHHHHHHHHHHHHCCCEEEECCCcC-CCCeeEccEEEeeC
Confidence 99999999999999999999999999999999999999999999999999999999999999764 35899999999999
Q ss_pred CCcc-cccccceecceEEEEeeCCHHHHHHHhhcCCCCceEEEecCCHHHHHHHHHhc--ceeEEEE-cCcC------C-
Q 015042 303 KEDM-IIAKEEIFGPVMALMKFKTVEEAIKSANNTQYGLAAGIVTKDLNVANTVSRSI--RAGIIWI-NCYF------G- 371 (414)
Q Consensus 303 ~~~~-~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~sv~s~d~~~~~~~~~~l--~~g~v~i-N~~~------~- 371 (414)
+++| .+++||+||||++|++|+|.+||++++|+++|||++||||+|.+.+++++++| ++|.|+| |... .
T Consensus 379 ~~~~~~i~~eE~FGPVl~V~~~~~~~eai~~aN~~~~gL~a~vft~d~~~~~~~~~~l~~~~G~v~InN~~~~~~~~~~~ 458 (663)
T TIGR02278 379 DPWAGAVHATEAFGPVATFFPYGDRAEAARLAARGGGSLVATLATSDPEEARQFILGLAPYHGRLHILNRDDAAESTGHG 458 (663)
T ss_pred CcchhhHHhccccCCeEEEEeeCCHHHHHHHHHcCCCCceEEEEeCCHHHHHHHHHHHHhhCCEEEECCCcccccccCCC
Confidence 9886 79999999999999999999999999999999999999999999999999999 8999999 6421 1
Q ss_pred -CCCCCCcccCCCCCCCcc-chHHHHHhhheeeEEEe
Q 015042 372 -FSMDCPYGGYKMSGFGRE-YGLESLYKYLQIKSVVT 406 (414)
Q Consensus 372 -~~~~~p~gG~~~sG~g~~-~g~~~~~~~~~~k~i~~ 406 (414)
..+.+||||+|.||+|++ +|.+++++|+++|+|..
T Consensus 459 ~~~~~~pfGG~k~SG~G~~~g~~~~l~~f~~~k~v~~ 495 (663)
T TIGR02278 459 SPLPRLLHGGPGRAGGGEELGGLRSVKHYMQRTAIQG 495 (663)
T ss_pred CCCCCCCCCCCccCcCCCccchHHHHHHhceeEEEEc
Confidence 235689999999999999 46899999999999865
|
This family includes paaN genes from Pseudomonas, Sinorhizobium, Rhodopseudomonas, Escherichia, Deinococcus and Corynebacterium. Another homology family (TIGR02288) includes several other species. |
| >cd07132 ALDH_F3AB Aldehyde dehydrogenase family 3 members A1, A2, and B1 and related proteins | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.1e-82 Score=637.04 Aligned_cols=397 Identities=29% Similarity=0.430 Sum_probs=363.4
Q ss_pred CHHHHHHHHHhHHHHHHHHHHhcCCChHHHhhchHHHHHHHHHHHHHhhhhhcCccccc----CCCcccceeecCCceEE
Q 015042 1 MWKFADLIEEHVEELAALDALDAGKVYLRAKTAEIPGAAEFLRFFAGAADKIHGEVLKM----SSELQGYTLREPVGVVG 76 (414)
Q Consensus 1 L~~~a~~l~~~~~~l~~~~~~etGk~~~e~~~~ei~~~~~~l~~~a~~~~~~~~~~~~~----~~~~~~~~~~~P~Gvv~ 76 (414)
|+++++.|++|+++|++++++|+|||..++...|+..+++.++++++.+.+........ ..+...++.++|+|||+
T Consensus 26 L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~~ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~ 105 (443)
T cd07132 26 LEALLRMLEENEDEIVEALAKDLRKPKFEAVLSEILLVKNEIKYAISNLPEWMKPEPVKKNLATLLDDVYIYKEPLGVVL 105 (443)
T ss_pred HHHHHHHHHHhHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhCCccCCCccccCCCceEEEEecccEEE
Confidence 67999999999999999999999999998766799999999999988776553322111 12345788999999999
Q ss_pred EEcCCccchHHHHHhHHHHHhhCCeEEeecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhhHHHhhhCCCccEEEE
Q 015042 77 HIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLTALYYAHLAKLAGIPDGVLNVVPGFGPTAGAAICSHMDIDYVCF 156 (414)
Q Consensus 77 ~i~p~n~P~~~~~~~~~~aLaaGN~vv~kps~~~~~~~~~l~~~l~~aG~p~g~v~~v~~~~~~~~~~l~~~~~v~~v~~ 156 (414)
+|+|||||+...++++++||++||+||+|||+.+|.++..+.+++.++ +|+|+++++++++ +....++. +++|.|.|
T Consensus 106 ~I~p~N~P~~~~~~~~~~ALaaGN~VvlKps~~~~~~~~~l~~~~~~~-lp~gv~~vv~g~~-~~~~~l~~-~~vd~V~f 182 (443)
T cd07132 106 IIGAWNYPLQLTLVPLVGAIAAGNCVVIKPSEVSPATAKLLAELIPKY-LDKECYPVVLGGV-EETTELLK-QRFDYIFY 182 (443)
T ss_pred EEcCCchhHHHHHHHHHHHHHcCCEEEEECCccCHHHHHHHHHHHHHh-CCcCeEEEEeCCH-HHHHHHHh-CCCCEEEE
Confidence 999999999999999999999999999999999999999999999986 9999999999944 44566665 58999999
Q ss_pred eCCcHHHHHHHHHHHhcccceeEEEcCCCCCceEcCCCCHHHHHHHHHHHhhccCCCCcccCceEEEeCchHHHHHHHHH
Q 015042 157 TGSTDVGRLVMQAAAASNLKQVSLELGGKSPLLIFDDADLDTAADVALLGNLYNKGEICVASSRVFVQEGIYDKFEKKLL 236 (414)
Q Consensus 157 tGs~~~g~~i~~~~a~~~~~~~~~e~gg~~~~iV~~dadl~~aa~~i~~~~~~~~Gq~C~a~~~i~V~~~i~d~f~~~l~ 236 (414)
|||+.+|+.|.+.++ ++++|+++|+|||||+||++|||++.|++.+++++|.++||.|+++++||||++++|+|+++|+
T Consensus 183 TGs~~~g~~i~~~a~-~~~~~~~lElgG~~p~iV~~dADl~~aa~~i~~~~f~~~GQ~C~a~~rv~V~~~i~d~f~~~l~ 261 (443)
T cd07132 183 TGSTSVGKIVMQAAA-KHLTPVTLELGGKSPCYVDKSCDIDVAARRIAWGKFINAGQTCIAPDYVLCTPEVQEKFVEALK 261 (443)
T ss_pred ECChHHHHHHHHHHH-hhCCceEEEcCCCCceEEcCCCCHHHHHHHHHHHHHhcCCCceeCCcEEEEcHHHHHHHHHHHH
Confidence 999999999999887 8899999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhhcccCCCCCCCCcccccCCHHHHHHHHHHHHHHHHcCCEEEeCCcccCCCCceeeeEEEeeCCCcccccccceecc
Q 015042 237 EKAKAWLVGDPFDPTVRQGPQISERHFDRILSYIEHGKREGATLLTGGKPIGDKGYYIEPTIFTNVKEDMIIAKEEIFGP 316 (414)
Q Consensus 237 ~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgP 316 (414)
+.+++++.|+| ++++++||++++++++++++++++ +++++||... .+|+|+.|||+.+++++|++++||+|||
T Consensus 262 ~~~~~~~~g~~-~~~~~~gpli~~~~~~~v~~~i~~-----a~~~~gg~~~-~~~~~~~Ptvl~~v~~~~~~~~eE~FgP 334 (443)
T cd07132 262 KTLKEFYGEDP-KESPDYGRIINDRHFQRLKKLLSG-----GKVAIGGQTD-EKERYIAPTVLTDVKPSDPVMQEEIFGP 334 (443)
T ss_pred HHHHHhcCCCC-CcccccCCcCCHHHHHHHHHHHhC-----CEEEeCCccC-CCCCEEeeEEEeCCCCCChHHhccccCc
Confidence 99999998888 688999999999999999999874 4899998763 3689999999999999999999999999
Q ss_pred eEEEEeeCCHHHHHHHhhcCCCCceEEEecCCHHHHHHHHHhcceeEEEEcCcCC--CCCCCCcccCCCCCCCccchHHH
Q 015042 317 VMALMKFKTVEEAIKSANNTQYGLAAGIVTKDLNVANTVSRSIRAGIIWINCYFG--FSMDCPYGGYKMSGFGREYGLES 394 (414)
Q Consensus 317 vl~v~~~~~~~eai~~~n~~~~gl~~sv~s~d~~~~~~~~~~l~~g~v~iN~~~~--~~~~~p~gG~~~sG~g~~~g~~~ 394 (414)
|++|++|+|++|||+++|+++|||++||||+|.+.++++++++++|.|+||++.. ..+.+||||+|.||+|+++|.+|
T Consensus 335 vl~v~~~~~~~eai~~an~~~~gL~a~i~t~d~~~~~~~~~~l~~G~v~IN~~~~~~~~~~~PfGG~k~SG~G~~~g~~~ 414 (443)
T cd07132 335 ILPIVTVNNLDEAIEFINSREKPLALYVFSNNKKVINKILSNTSSGGVCVNDTIMHYTLDSLPFGGVGNSGMGAYHGKYS 414 (443)
T ss_pred eeEEEEeCCHHHHHHHHhcCCCCcEEEEECCCHHHHHHHHHhCCcceEEECCcccccCCCCCCCCCCCcccCCCcccHHH
Confidence 9999999999999999999999999999999999999999999999999998764 34679999999999999999999
Q ss_pred HHhhheeeEEEeeC
Q 015042 395 LYKYLQIKSVVTPI 408 (414)
Q Consensus 395 ~~~~~~~k~i~~~~ 408 (414)
+++|+++|+|+++.
T Consensus 415 l~~~~~~k~v~~~~ 428 (443)
T cd07132 415 FDTFSHKRSCLVKS 428 (443)
T ss_pred HHHhccccEEEEcc
Confidence 99999999998764
|
NAD(P)+-dependent, aldehyde dehydrogenase, family 3 members A1 and B1 (ALDH3A1, ALDH3B1, EC=1.2.1.5) and fatty aldehyde dehydrogenase, family 3 member A2 (ALDH3A2, EC=1.2.1.3), and similar sequences are included in this CD. Human ALDH3A1 is a homodimer with a critical role in cellular defense against oxidative stress; it catalyzes the oxidation of various cellular membrane lipid-derived aldehydes. Corneal crystalline ALDH3A1 protects the cornea and underlying lens against UV-induced oxidative stress. Human ALDH3A2, a microsomal homodimer, catalyzes the oxidation of long-chain aliphatic aldehydes to fatty acids. Human ALDH3B1 is highly expressed in the kidney and liver and catalyzes the oxidation of various medium- and long-chain saturated and unsaturated aliphatic aldehydes. |
| >cd07082 ALDH_F11_NP-GAPDH NADP+-dependent non-phosphorylating glyceraldehyde 3-phosphate dehydrogenase and ALDH family 11 | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.4e-82 Score=642.68 Aligned_cols=400 Identities=36% Similarity=0.530 Sum_probs=375.9
Q ss_pred CHHHHHHHHHhHHHHHHHHHHhcCCChHHHhhchHHHHHHHHHHHHHhhhhhcCcccccC-----CCcccceeecCCceE
Q 015042 1 MWKFADLIEEHVEELAALDALDAGKVYLRAKTAEIPGAAEFLRFFAGAADKIHGEVLKMS-----SELQGYTLREPVGVV 75 (414)
Q Consensus 1 L~~~a~~l~~~~~~l~~~~~~etGk~~~e~~~~ei~~~~~~l~~~a~~~~~~~~~~~~~~-----~~~~~~~~~~P~Gvv 75 (414)
|+++++.|.+++++|++++++|+|||..++. .|+..+++.++++++..+++.+...+.+ .+...+.+++|+|||
T Consensus 67 L~~~a~~l~~~~~el~~~~~~e~Gk~~~~a~-~ev~~~~~~l~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~P~GVv 145 (473)
T cd07082 67 LHKFADLLKENKEEVANLLMWEIGKTLKDAL-KEVDRTIDYIRDTIEELKRLDGDSLPGDWFPGTKGKIAQVRREPLGVV 145 (473)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHcCCcHHHHH-HHHHHHHHHHHHHHHHHHHhcCCcccccccccCCCceeEEEEecceEE
Confidence 5789999999999999999999999999764 5999999999999988877655433321 244568899999999
Q ss_pred EEEcCCccchHHHHHhHHHHHhhCCeEEeecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhhHHHhhhCCCccEEE
Q 015042 76 GHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLTALYYAHLAKLAGIPDGVLNVVPGFGPTAGAAICSHMDIDYVC 155 (414)
Q Consensus 76 ~~i~p~n~P~~~~~~~~~~aLaaGN~vv~kps~~~~~~~~~l~~~l~~aG~p~g~v~~v~~~~~~~~~~l~~~~~v~~v~ 155 (414)
++|+|||||+...++++++||++||+||+|||+.+|.++..+.++|.++|+|+++++++++++.+.++.|..|+++|.|.
T Consensus 146 ~~I~p~N~P~~~~~~~i~~AL~aGN~vilKps~~~~~~~~~l~~~l~~aglp~~~~~vv~g~~~~~~~~l~~~~~v~~V~ 225 (473)
T cd07082 146 LAIGPFNYPLNLTVSKLIPALIMGNTVVFKPATQGVLLGIPLAEAFHDAGFPKGVVNVVTGRGREIGDPLVTHGRIDVIS 225 (473)
T ss_pred EEECCcCcHHHHHHHHHHHHHHcCCEEEEECCCCCcHHHHHHHHHHHHcCCCccceEEEecCcHHHHHHHhcCCCCCEEE
Confidence 99999999999999999999999999999999999999999999999999999999999997777899999999999999
Q ss_pred EeCCcHHHHHHHHHHHhcccceeEEEcCCCCCceEcCCCCHHHHHHHHHHHhhccCCCCcccCceEEEeCchHHHHHHHH
Q 015042 156 FTGSTDVGRLVMQAAAASNLKQVSLELGGKSPLLIFDDADLDTAADVALLGNLYNKGEICVASSRVFVQEGIYDKFEKKL 235 (414)
Q Consensus 156 ~tGs~~~g~~i~~~~a~~~~~~~~~e~gg~~~~iV~~dadl~~aa~~i~~~~~~~~Gq~C~a~~~i~V~~~i~d~f~~~l 235 (414)
||||..+|+.|.+.++ ++|+++|+||+||+||++|||++.|++.+++++|.++||.|+++++||||++++|+|+++|
T Consensus 226 ftGs~~~g~~i~~~a~---~~~~~lelgg~n~~iV~~dadl~~aa~~i~~~~~~~~GQ~C~a~~~v~v~~~i~d~f~~~l 302 (473)
T cd07082 226 FTGSTEVGNRLKKQHP---MKRLVLELGGKDPAIVLPDADLELAAKEIVKGALSYSGQRCTAIKRVLVHESVADELVELL 302 (473)
T ss_pred EECcHHHHHHHHHHhC---CCcEEEEcCCCCeEEECCCCCHHHHHHHHHHHHHHhCCCcCCCCeEEEEcHHHHHHHHHHH
Confidence 9999999999998764 7899999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhhcccCCCCCCCCcccccCCHHHHHHHHHHHHHHHHcCCEEEeCCcccCCCCceeeeEEEeeCCCcccccccceec
Q 015042 236 LEKAKAWLVGDPFDPTVRQGPQISERHFDRILSYIEHGKREGATLLTGGKPIGDKGYYIEPTIFTNVKEDMIIAKEEIFG 315 (414)
Q Consensus 236 ~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fg 315 (414)
.++++++++|+|.++++++||+++..+++++++++++++.+|+++++||... .|+|+.|||+.++++++++++||+||
T Consensus 303 ~~~~~~~~~g~~~~~~~~~gp~i~~~~~~~~~~~~~~a~~~ga~~~~gg~~~--~g~~~~Ptvl~~~~~~~~~~~eE~fg 380 (473)
T cd07082 303 KEEVAKLKVGMPWDNGVDITPLIDPKSADFVEGLIDDAVAKGATVLNGGGRE--GGNLIYPTLLDPVTPDMRLAWEEPFG 380 (473)
T ss_pred HHHHhcCCCCCCCCCCCCcCCCCCHHHHHHHHHHHHHHHHCCCEEEeCCccC--CCeEEeeEEEecCCCCCHHHhCcCcC
Confidence 9999999999999999999999999999999999999999999999999764 48999999999999999999999999
Q ss_pred ceEEEEeeCCHHHHHHHhhcCCCCceEEEecCCHHHHHHHHHhcceeEEEEcCcCCCC-CCCCcccCCCCCCCccchHHH
Q 015042 316 PVMALMKFKTVEEAIKSANNTQYGLAAGIVTKDLNVANTVSRSIRAGIIWINCYFGFS-MDCPYGGYKMSGFGREYGLES 394 (414)
Q Consensus 316 Pvl~v~~~~~~~eai~~~n~~~~gl~~sv~s~d~~~~~~~~~~l~~g~v~iN~~~~~~-~~~p~gG~~~sG~g~~~g~~~ 394 (414)
||++|++|+|++|||+++|+++|||++||||+|.+.++++++++++|+|+||++.... +.+||||+|.||+|+++|.+|
T Consensus 381 Pvl~v~~~~~~~eai~~~n~~~~gL~~~v~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~~pfGG~k~SG~g~~~g~~~ 460 (473)
T cd07082 381 PVLPIIRVNDIEEAIELANKSNYGLQASIFTKDINKARKLADALEVGTVNINSKCQRGPDHFPFLGRKDSGIGTQGIGDA 460 (473)
T ss_pred ceEEEEEeCCHHHHHHHHhCCCCCceEEEEeCCHHHHHHHHHhCCcceEEECCCCCCCCCCCCCCcccccccCCCChHHH
Confidence 9999999999999999999999999999999999999999999999999999987543 568999999999999999999
Q ss_pred HHhhheeeEEEe
Q 015042 395 LYKYLQIKSVVT 406 (414)
Q Consensus 395 ~~~~~~~k~i~~ 406 (414)
+++|++.|+|++
T Consensus 461 l~~~~~~k~i~~ 472 (473)
T cd07082 461 LRSMTRRKGIVI 472 (473)
T ss_pred HHHhhceeEEEE
Confidence 999999999875
|
NADP+-dependent non-phosphorylating glyceraldehyde 3-phosphate dehydrogenase (NP-GAPDH, EC=1.2.1.9) catalyzes the irreversible oxidation of glyceraldehyde 3-phosphate to 3-phosphoglycerate generating NADPH for biosynthetic reactions. This CD also includes the Arabidopsis thaliana osmotic-stress-inducible ALDH family 11, ALDH11A3 and similar sequences. In autotrophic eukaryotes, NP-GAPDH generates NADPH for biosynthetic processes from photosynthetic glyceraldehyde-3-phosphate exported from the chloroplast and catalyzes one of the classic glycolytic bypass reactions unique to plants. |
| >PRK11903 aldehyde dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-81 Score=640.49 Aligned_cols=402 Identities=24% Similarity=0.332 Sum_probs=358.7
Q ss_pred CHHHHHHHHHhHHHHHHHHHHhcCCChHHHhhchHHHHHHHHHHHHHhhhhhcCcccccC---------CCcccceeecC
Q 015042 1 MWKFADLIEEHVEELAALDALDAGKVYLRAKTAEIPGAAEFLRFFAGAADKIHGEVLKMS---------SELQGYTLREP 71 (414)
Q Consensus 1 L~~~a~~l~~~~~~l~~~~~~etGk~~~e~~~~ei~~~~~~l~~~a~~~~~~~~~~~~~~---------~~~~~~~~~~P 71 (414)
|+++++.|++++++|++++++|+|||..++ ..|+..+++.+++++.++....+...... .....+..++|
T Consensus 69 L~~~a~~l~~~~~ela~~~~~e~Gkp~~~a-~~ev~~~i~~l~~~a~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P 147 (521)
T PRK11903 69 LAAIVKVLQANRDAYYDIATANSGTTRNDS-AVDIDGGIFTLGYYAKLGAALGDARLLRDGEAVQLGKDPAFQGQHVLVP 147 (521)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCCHHHH-HHHHHHHHHHHHHHHHHHHHcCCCcccCCCccccccccccccceEEEec
Confidence 578999999999999999999999999975 46999999999999998766543221110 12234667889
Q ss_pred -CceEEEEcCCccchHHHHHhHHHHHhhCCeEEeecCCCChHHHHHHHHHHHHcC-CCCCcEEEEeCCchhhHHHhhhCC
Q 015042 72 -VGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLTALYYAHLAKLAG-IPDGVLNVVPGFGPTAGAAICSHM 149 (414)
Q Consensus 72 -~Gvv~~i~p~n~P~~~~~~~~~~aLaaGN~vv~kps~~~~~~~~~l~~~l~~aG-~p~g~v~~v~~~~~~~~~~l~~~~ 149 (414)
+|||++|+|||||+...++++++||++||+||+|||+.+|.++..+.+++.++| +|+|+++++++++.++.+.| +
T Consensus 148 ~~GVv~~I~pwN~P~~~~~~~~~~ALaaGN~VV~KPs~~tp~~~~~l~~~~~~ag~lP~gv~~~v~g~~~~~~~~l---~ 224 (521)
T PRK11903 148 TRGVALFINAFNFPAWGLWEKAAPALLAGVPVIVKPATATAWLTQRMVKDVVAAGILPAGALSVVCGSSAGLLDHL---Q 224 (521)
T ss_pred CcceEEEECCcchHHHHHHHHHHHHHHcCCeEEEEcCCcChHHHHHHHHHHHHhCCCCcCceEEeeCCchHHHhcc---c
Confidence 699999999999999999999999999999999999999999999999999999 99999999998655544443 7
Q ss_pred CccEEEEeCCcHHHHHHHHHHH-hcccceeEEEcCCCCCceEcCCCC-----HHHHHHHHHHHhhccCCCCcccCceEEE
Q 015042 150 DIDYVCFTGSTDVGRLVMQAAA-ASNLKQVSLELGGKSPLLIFDDAD-----LDTAADVALLGNLYNKGEICVASSRVFV 223 (414)
Q Consensus 150 ~v~~v~~tGs~~~g~~i~~~~a-~~~~~~~~~e~gg~~~~iV~~dad-----l~~aa~~i~~~~~~~~Gq~C~a~~~i~V 223 (414)
++|.|.||||..+|+.|++.++ ..+++|+++|+|||||+||++||| ++.+++.+++++|.|+||.|++++||||
T Consensus 225 ~v~~v~fTGS~~~G~~v~~~aa~~~~~~~~~lElGGknp~IV~~dAd~~~~~~~~aa~~i~~~~f~~sGQ~C~a~~rv~V 304 (521)
T PRK11903 225 PFDVVSFTGSAETAAVLRSHPAVVQRSVRVNVEADSLNSALLGPDAAPGSEAFDLFVKEVVREMTVKSGQKCTAIRRIFV 304 (521)
T ss_pred CCCEEEEECCHHHHHHHHhhhhhhccCceeEeeccccCceEEccCCcccchhHHHHHHHHHHHHHhccCCCccCCeEEEE
Confidence 8999999999999999998642 367899999999999999999999 5999999999999999999999999999
Q ss_pred eCchHHHHHHHHHHHHhhcccCCCCCCCCcccccCCHHHHHHHHHHHHHHHHcCCEEEeCCccc------CCCCceeeeE
Q 015042 224 QEGIYDKFEKKLLEKAKAWLVGDPFDPTVRQGPQISERHFDRILSYIEHGKREGATLLTGGKPI------GDKGYYIEPT 297 (414)
Q Consensus 224 ~~~i~d~f~~~l~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ga~v~~gg~~~------~~~g~~~~Pt 297 (414)
|+++||+|+++|+++++++++|+|.++++++||+++..+++++.++++.. .+|+++++||... .+.|+|++||
T Consensus 305 ~~~i~d~f~~~L~~~~~~l~~G~p~~~~~~~Gpli~~~~~~~v~~~i~~~-~~ga~vl~gg~~~~~~~~~~~~g~~~~PT 383 (521)
T PRK11903 305 PEALYDAVAEALAARLAKTTVGNPRNDGVRMGPLVSRAQLAAVRAGLAAL-RAQAEVLFDGGGFALVDADPAVAACVGPT 383 (521)
T ss_pred ehhHHHHHHHHHHHHHHhccCCCCCCCcCccCCCCCHHHHHHHHHHHHHH-hcCCEEEECCccCCCCCCCCCCCeEEcCE
Confidence 99999999999999999999999999999999999999999999999864 5799999999652 1358999999
Q ss_pred EEeeCCC--cccccccceecceEEEEeeCCHHHHHHHhhcCCCCceEEEecCCHHHHHHHHHhc--ceeEEEEcCcCC--
Q 015042 298 IFTNVKE--DMIIAKEEIFGPVMALMKFKTVEEAIKSANNTQYGLAAGIVTKDLNVANTVSRSI--RAGIIWINCYFG-- 371 (414)
Q Consensus 298 vl~~~~~--~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~sv~s~d~~~~~~~~~~l--~~g~v~iN~~~~-- 371 (414)
|+.++++ ++.+++||+||||++|++|+|.+|||+++|+++|||++||||+|.+.++++++++ ++|+|+||+...
T Consensus 384 vl~~~~~~~~~~i~~eE~FGPvl~V~~~~~~~eai~~~N~~~~gL~asvft~d~~~~~~~~~~l~~~~G~V~iN~~~~~~ 463 (521)
T PRK11903 384 LLGASDPDAATAVHDVEVFGPVATLLPYRDAAHALALARRGQGSLVASVYSDDAAFLAAAALELADSHGRVHVISPDVAA 463 (521)
T ss_pred EEeccCCCccchHHhCcccCCeEEEEeeCCHHHHHHHHhcCCCCceEEEEeCCHHHHHHHHHHHHHhCCEEEEcCccccc
Confidence 9986654 4789999999999999999999999999999999999999999999999999999 899999997532
Q ss_pred -------CCCCCCcccCCCCCCCccch-HHHHHhhheeeEEEee
Q 015042 372 -------FSMDCPYGGYKMSGFGREYG-LESLYKYLQIKSVVTP 407 (414)
Q Consensus 372 -------~~~~~p~gG~~~sG~g~~~g-~~~~~~~~~~k~i~~~ 407 (414)
..+.+||||+|.||+|+++| .+++++||++|+|..+
T Consensus 464 ~~~~~~~~~~~~PfGG~k~SG~Gr~~g~~~~l~~~t~~~~~~~~ 507 (521)
T PRK11903 464 LHTGHGNVMPQSLHGGPGRAGGGEELGGLRALAFYHRRSAVQAS 507 (521)
T ss_pred ccccCCCCCCCCCCCCCCcCcCCcccccHHHHHHHhccceeeCC
Confidence 34578999999999999854 8999999998887543
|
|
| >TIGR01238 D1pyr5carbox3 delta-1-pyrroline-5-carboxylate dehydrogenase (PutA C-terminal domain) | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.5e-81 Score=634.69 Aligned_cols=387 Identities=32% Similarity=0.474 Sum_probs=359.2
Q ss_pred CHHHHHHHHHhHHHHHHHHHHhcCCChHHHhhchHHHHHHHHHHHHHhhhhhcCcccccCCCcccceeecCCceEEEEcC
Q 015042 1 MWKFADLIEEHVEELAALDALDAGKVYLRAKTAEIPGAAEFLRFFAGAADKIHGEVLKMSSELQGYTLREPVGVVGHIIP 80 (414)
Q Consensus 1 L~~~a~~l~~~~~~l~~~~~~etGk~~~e~~~~ei~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p 80 (414)
|+++++.|++++++|++++++|+|||..++ ..|+..+++.+++++...++..+ ...++|+|||++|+|
T Consensus 102 L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a-~~ev~~~i~~l~~~a~~~~~~~~-----------~~~~~P~GVV~~I~p 169 (500)
T TIGR01238 102 LDRLADLLELHMPELMALCVREAGKTIHNA-IAEVREAVDFCRYYAKQVRDVLG-----------EFSVESRGVFVCISP 169 (500)
T ss_pred HHHHHHHHHhHHHHHHHHHHHHcCCCHHHH-HHHHHHHHHHHHHHHHHHHHhcC-----------ceeccCcceEEEECC
Confidence 578999999999999999999999999976 46999999999999987754321 136899999999999
Q ss_pred CccchHHHHHhHHHHHhhCCeEEeecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhhHHHhhhCCCccEEEEeCCc
Q 015042 81 WNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLTALYYAHLAKLAGIPDGVLNVVPGFGPTAGAAICSHMDIDYVCFTGST 160 (414)
Q Consensus 81 ~n~P~~~~~~~~~~aLaaGN~vv~kps~~~~~~~~~l~~~l~~aG~p~g~v~~v~~~~~~~~~~l~~~~~v~~v~~tGs~ 160 (414)
||||+...++++++||++||+||+|||+.+|.++..+.+++.++|+|+|+++++++++.+.++.|+.||++|.|.||||.
T Consensus 170 wN~P~~~~~~~i~~ALaaGN~VVlKps~~tp~~~~~l~~~~~~aGlP~gvv~~v~g~~~~~~~~l~~~~~v~~V~ftGs~ 249 (500)
T TIGR01238 170 WNFPLAIFTGQISAALAAGNTVIAKPAEQTSLIAYRAVELMQEAGFPAGTIQLLPGRGADVGAALTSDPRIAGVAFTGST 249 (500)
T ss_pred CchHHHHHHHHHHHHHHcCCEEEEeCCCCccHHHHHHHHHHHHcCCCCCceEEEecCcchHHHHHhcCCCcCeEEEECCH
Confidence 99999999999999999999999999999999999999999999999999999998766889999999999999999999
Q ss_pred HHHHHHHHHHHhccc---ceeEEEcCCCCCceEcCCCCHHHHHHHHHHHhhccCCCCcccCceEEEeCchHHHHHHHHHH
Q 015042 161 DVGRLVMQAAAASNL---KQVSLELGGKSPLLIFDDADLDTAADVALLGNLYNKGEICVASSRVFVQEGIYDKFEKKLLE 237 (414)
Q Consensus 161 ~~g~~i~~~~a~~~~---~~~~~e~gg~~~~iV~~dadl~~aa~~i~~~~~~~~Gq~C~a~~~i~V~~~i~d~f~~~l~~ 237 (414)
.+|+.|.+.++ +++ +|+++|+|||||+||++|||++.|++.+++++|.|+||.|+++++||||++++|+|+++|++
T Consensus 250 ~~g~~v~~~aa-~~~~~~~~v~lElGGknp~IV~~dAdld~Aa~~i~~~~f~nsGQ~C~a~~rv~V~~~i~d~f~~~L~~ 328 (500)
T TIGR01238 250 EVAQLINQTLA-QREDAPVPLIAETGGQNAMIVDSTALPEQVVRDVLRSAFDSAGQRCSALRVLCVQEDVADRVLTMIQG 328 (500)
T ss_pred HHHHHHHHHHh-hcccCCceEEEecCCcCcEEECCCCCHHHHHHHHHHHHHhcCCCCCCCCceeEEcHhhHHHHHHHHHH
Confidence 99999999988 554 79999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhhcccCCCCCCCCcccccCCHHHHHHHHHHHHHHHHcCCEEEeCCcc---cCCCCceeeeEEEeeCCCccccccccee
Q 015042 238 KAKAWLVGDPFDPTVRQGPQISERHFDRILSYIEHGKREGATLLTGGKP---IGDKGYYIEPTIFTNVKEDMIIAKEEIF 314 (414)
Q Consensus 238 ~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ga~v~~gg~~---~~~~g~~~~Ptvl~~~~~~~~~~~~E~f 314 (414)
.++++++|+|.++++++||++++.++++++++++++++.|++++.++.. ....|+|++|||+.+ ++|.++++|+|
T Consensus 329 ~~~~~~vG~p~~~~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~l~~~~~~~~~~~~~g~f~~PTvl~~--~~~~~~~eE~F 406 (500)
T TIGR01238 329 AMQELKVGVPHLLTTDVGPVIDAEAKQNLLAHIEHMSQTQKKIAQLTLDDSRACQHGTFVAPTLFEL--DDIAELSEEVF 406 (500)
T ss_pred HHHhCCCCCCCCCCCCcCCCCCHHHHHHHHHHHHHHHHcCCEEEeeccCCCCCCCCCeeEcCEEEcc--CCchHhhCCCc
Confidence 9999999999999999999999999999999999999999988754321 123699999999973 68889999999
Q ss_pred cceEEEEeeC--CHHHHHHHhhcCCCCceEEEecCCHHHHHHHHHhcceeEEEEcCcCCC--CCCCCcccCCCCCCC-cc
Q 015042 315 GPVMALMKFK--TVEEAIKSANNTQYGLAAGIVTKDLNVANTVSRSIRAGIIWINCYFGF--SMDCPYGGYKMSGFG-RE 389 (414)
Q Consensus 315 gPvl~v~~~~--~~~eai~~~n~~~~gl~~sv~s~d~~~~~~~~~~l~~g~v~iN~~~~~--~~~~p~gG~~~sG~g-~~ 389 (414)
|||++|++|+ ++||||+++|+++|||++||||+|.+.++++++++++|.|+||+.... .+.+||||+|.||+| ++
T Consensus 407 gPvl~v~~~~~~~~deai~~~N~~~~gLs~~vfT~d~~~~~~~~~~l~~G~v~IN~~~~~~~~~~~PfGG~k~SG~G~~~ 486 (500)
T TIGR01238 407 GPVLHVVRYKARELDQIVDQINQTGYGLTMGVHSRIETTYRWIEKHARVGNCYVNRNQVGAVVGVQPFGGQGLSGTGPKA 486 (500)
T ss_pred CCEEEEEEeCCCCHHHHHHHHhCCCCCCeEEEEeCCHHHHHHHHHhCCcceEEECCCCCCCCCCCCCCCccccccCCCcc
Confidence 9999999998 799999999999999999999999999999999999999999987653 355799999999999 79
Q ss_pred chHHHHHhhheee
Q 015042 390 YGLESLYKYLQIK 402 (414)
Q Consensus 390 ~g~~~~~~~~~~k 402 (414)
+|.+++++|+++|
T Consensus 487 gg~~~~~~~~~~k 499 (500)
T TIGR01238 487 GGPHYLYRLTQVQ 499 (500)
T ss_pred CCHHHHHHHHhhc
Confidence 9999999999987
|
This model represents one of several related branches of delta-1-pyrroline-5-carboxylate dehydrogenase. Members of this branch are the C-terminal domain of the PutA bifunctional proline dehydrogenase / delta-1-pyrroline-5-carboxylate dehydrogenase. |
| >cd07087 ALDH_F3-13-14_CALDH-like ALDH subfamily: Coniferyl aldehyde dehydrogenase, ALDH families 3, 13, and 14, and other related proteins | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-80 Score=623.70 Aligned_cols=394 Identities=32% Similarity=0.488 Sum_probs=361.9
Q ss_pred CHHHHHHHHHhHHHHHHHHHHhcCCChHHHhhchHHHHHHHHHHHHHhhhhhcCcc-ccc---CCCcccceeecCCceEE
Q 015042 1 MWKFADLIEEHVEELAALDALDAGKVYLRAKTAEIPGAAEFLRFFAGAADKIHGEV-LKM---SSELQGYTLREPVGVVG 76 (414)
Q Consensus 1 L~~~a~~l~~~~~~l~~~~~~etGk~~~e~~~~ei~~~~~~l~~~a~~~~~~~~~~-~~~---~~~~~~~~~~~P~Gvv~ 76 (414)
|+++++.|++|+++|++++++|+|||..++...|+..+++.+++++....+..+.. ... ..+...+.+++|+|||+
T Consensus 26 L~~~a~~l~~~~~el~~~~~~e~Gk~~~~~~~~Ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~ 105 (426)
T cd07087 26 LKALKRMLTENEEEIAAALYADLGKPPAEAYLTEIAVVLGEIDHALKHLKKWMKPRRVSVPLLLQPAKAYVIPEPLGVVL 105 (426)
T ss_pred HHHHHHHHHHhHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhCCcccCCccccCCCceEEEEecCcEEE
Confidence 57899999999999999999999999876666699999999999988776543321 111 12345688999999999
Q ss_pred EEcCCccchHHHHHhHHHHHhhCCeEEeecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhhHHHhhhCCCccEEEE
Q 015042 77 HIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLTALYYAHLAKLAGIPDGVLNVVPGFGPTAGAAICSHMDIDYVCF 156 (414)
Q Consensus 77 ~i~p~n~P~~~~~~~~~~aLaaGN~vv~kps~~~~~~~~~l~~~l~~aG~p~g~v~~v~~~~~~~~~~l~~~~~v~~v~~ 156 (414)
+|+|||||+...++++++||++||+||+|||+.+|.++..+.++|.+ |+|+|+++++++ +.+.+..|+.|+ +|.|.|
T Consensus 106 ~i~p~n~P~~~~~~~~~~aL~aGN~vvlKps~~~p~~~~~l~~~~~~-~~P~gv~~vv~g-~~~~~~~l~~~~-v~~V~f 182 (426)
T cd07087 106 IIGPWNYPLQLALAPLIGAIAAGNTVVLKPSELAPATSALLAKLIPK-YFDPEAVAVVEG-GVEVATALLAEP-FDHIFF 182 (426)
T ss_pred EEcCCchHHHHHHHHHHHHHHcCCEEEEECCccCHHHHHHHHHHHHH-hCCCCEEEEEeC-CchHHHHHHhCC-CCEEEE
Confidence 99999999999999999999999999999999999999999999999 699999999998 446688999998 999999
Q ss_pred eCCcHHHHHHHHHHHhcccceeEEEcCCCCCceEcCCCCHHHHHHHHHHHhhccCCCCcccCceEEEeCchHHHHHHHHH
Q 015042 157 TGSTDVGRLVMQAAAASNLKQVSLELGGKSPLLIFDDADLDTAADVALLGNLYNKGEICVASSRVFVQEGIYDKFEKKLL 236 (414)
Q Consensus 157 tGs~~~g~~i~~~~a~~~~~~~~~e~gg~~~~iV~~dadl~~aa~~i~~~~~~~~Gq~C~a~~~i~V~~~i~d~f~~~l~ 236 (414)
|||+.+|+.|.+.++ .+++|+++|+|||||+||++|||++.|++.+++++|.++||.|+++++||||++++|+|+++|+
T Consensus 183 tGs~~~g~~i~~~a~-~~~~~~~lelgG~~~~iV~~dadl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~d~f~~~L~ 261 (426)
T cd07087 183 TGSPAVGKIVMEAAA-KHLTPVTLELGGKSPCIVDKDANLEVAARRIAWGKFLNAGQTCIAPDYVLVHESIKDELIEELK 261 (426)
T ss_pred eCChHHHHHHHHHHH-hhCCceEEeccCCCceEecCCCCHHHHHHHHHHHHHhccCCccccCCEEEEcHHHHHHHHHHHH
Confidence 999999999999987 7899999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhhcccCCCCCCCCcccccCCHHHHHHHHHHHHHHHHcCCEEEeCCcccCCCCceeeeEEEeeCCCcccccccceecc
Q 015042 237 EKAKAWLVGDPFDPTVRQGPQISERHFDRILSYIEHGKREGATLLTGGKPIGDKGYYIEPTIFTNVKEDMIIAKEEIFGP 316 (414)
Q Consensus 237 ~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgP 316 (414)
+.+++++.++|. +.+++||++++.+++++.++++++ ++++||... .+|+|+.|||+.+++++|.+++||+|||
T Consensus 262 ~~~~~l~~~~~~-~~~~~gpli~~~~~~~~~~~i~~a-----~v~~gg~~~-~~g~~~~Ptvl~~~~~~~~~~~eE~fgP 334 (426)
T cd07087 262 KAIKEFYGEDPK-ESPDYGRIINERHFDRLASLLDDG-----KVVIGGQVD-KEERYIAPTILDDVSPDSPLMQEEIFGP 334 (426)
T ss_pred HHHHHHcCCCCc-cCCCcCCCCCHHHHHHHHHHHhcc-----eEEeCCccC-CCCCEEeeEEEecCCCCCHHHhcccccc
Confidence 999999866664 688999999999999999999765 789998763 3689999999999999999999999999
Q ss_pred eEEEEeeCCHHHHHHHhhcCCCCceEEEecCCHHHHHHHHHhcceeEEEEcCcCC--CCCCCCcccCCCCCCCccchHHH
Q 015042 317 VMALMKFKTVEEAIKSANNTQYGLAAGIVTKDLNVANTVSRSIRAGIIWINCYFG--FSMDCPYGGYKMSGFGREYGLES 394 (414)
Q Consensus 317 vl~v~~~~~~~eai~~~n~~~~gl~~sv~s~d~~~~~~~~~~l~~g~v~iN~~~~--~~~~~p~gG~~~sG~g~~~g~~~ 394 (414)
|++|++|+|++||++++|+++|||++||||+|.+.++++++++++|+|+||++.. ..+.+||||+|.||+|+++|.++
T Consensus 335 vl~v~~~~~~~eai~~~n~~~~gL~~~v~t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~~~PfGG~k~SG~G~~~g~~~ 414 (426)
T cd07087 335 ILPILTYDDLDEAIEFINSRPKPLALYLFSEDKAVQERVLAETSSGGVCVNDVLLHAAIPNLPFGGVGNSGMGAYHGKAG 414 (426)
T ss_pred eEEEEEeCCHHHHHHHHhCCCCCceEEEECCCHHHHHHHHhcCCcccEEECCcccccCCCCCCCCCCCcccCCCccCHHH
Confidence 9999999999999999999999999999999999999999999999999998764 44789999999999999999999
Q ss_pred HHhhheeeEEE
Q 015042 395 LYKYLQIKSVV 405 (414)
Q Consensus 395 ~~~~~~~k~i~ 405 (414)
+++||++|+++
T Consensus 415 l~~~~~~k~~~ 425 (426)
T cd07087 415 FDTFSHLKSVL 425 (426)
T ss_pred HHHhccceeec
Confidence 99999999874
|
ALDH subfamily which includes NAD(P)+-dependent, aldehyde dehydrogenase, family 3 member A1 and B1 (ALDH3A1, ALDH3B1, EC=1.2.1.5) and fatty aldehyde dehydrogenase, family 3 member A2 (ALDH3A2, EC=1.2.1.3), and also plant ALDH family members ALDH3F1, ALDH3H1, and ALDH3I1, fungal ALDH14 (YMR110C) and the protozoan family 13 member (ALDH13), as well as coniferyl aldehyde dehydrogenases (CALDH, EC=1.2.1.68), and other similar sequences, such as the Pseudomonas putida benzaldehyde dehydrogenase I that is involved in the metabolism of mandelate. |
| >PRK11563 bifunctional aldehyde dehydrogenase/enoyl-CoA hydratase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=9e-81 Score=653.95 Aligned_cols=400 Identities=26% Similarity=0.325 Sum_probs=358.8
Q ss_pred CHHHHHHHHHhHHHHHHHHHHhcCCChHHHhhchHHHHHHHHHHHHHhhhhhc--------CcccccC-CC-cccceeec
Q 015042 1 MWKFADLIEEHVEELAALDALDAGKVYLRAKTAEIPGAAEFLRFFAGAADKIH--------GEVLKMS-SE-LQGYTLRE 70 (414)
Q Consensus 1 L~~~a~~l~~~~~~l~~~~~~etGk~~~e~~~~ei~~~~~~l~~~a~~~~~~~--------~~~~~~~-~~-~~~~~~~~ 70 (414)
|+++++.|++|+++|++ +++|+|||..++. .|+..+++.+++++.++++.. ++..+.. .+ ...+..++
T Consensus 69 L~~~a~~l~~~~~ela~-l~~e~GK~~~~a~-~ev~~~~~~~~~~a~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~ 146 (675)
T PRK11563 69 LKALAKYLLERKEELYA-LSAQTGATRRDSW-IDIEGGIGTLFTYASKGRRELPNDTVLVEGEVEPLSKGGTFAGRHILT 146 (675)
T ss_pred HHHHHHHHHHhHHHHHH-HHHHhCCCHHHHH-HHHHHHHHHHHHHHHHHhhhccccccccCCccccccCCCcccceEEEe
Confidence 57899999999999998 5999999999764 599999999999998875532 2222211 11 22468889
Q ss_pred CC-ceEEEEcCCccchHHHHHhHHHHHhhCCeEEeecCCCChHHHHHHHHHHHHcC-CCCCcEEEEeCCchhhHHHhhhC
Q 015042 71 PV-GVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLTALYYAHLAKLAG-IPDGVLNVVPGFGPTAGAAICSH 148 (414)
Q Consensus 71 P~-Gvv~~i~p~n~P~~~~~~~~~~aLaaGN~vv~kps~~~~~~~~~l~~~l~~aG-~p~g~v~~v~~~~~~~~~~l~~~ 148 (414)
|+ |||++|+|||||+...++++++||++||+||+|||+.+|+++..+.+++.++| +|+|++|+++++. ++.+..+
T Consensus 147 p~~GVv~~I~PwNfP~~~~~~~i~pALaaGN~VV~KPse~tp~~a~~l~~~~~eaG~~P~gv~~vv~g~~---~~~~~~~ 223 (675)
T PRK11563 147 PLEGVAVHINAFNFPVWGMLEKLAPAFLAGVPAIVKPATATAYLTEAVVRLIVESGLLPEGALQLICGSA---GDLLDHL 223 (675)
T ss_pred ecCceEEEECCCchHHHHHHHHHHHHHHcCCeEEEECCCCCcHHHHHHHHHHHHcCCCCCCcEEEeeCCH---HHHhhcC
Confidence 97 99999999999999999999999999999999999999999999999999999 9999999999842 2344444
Q ss_pred CCccEEEEeCCcHHHHHHHHHH-HhcccceeEEEcCCCCCceEcCCCC-----HHHHHHHHHHHhhccCCCCcccCceEE
Q 015042 149 MDIDYVCFTGSTDVGRLVMQAA-AASNLKQVSLELGGKSPLLIFDDAD-----LDTAADVALLGNLYNKGEICVASSRVF 222 (414)
Q Consensus 149 ~~v~~v~~tGs~~~g~~i~~~~-a~~~~~~~~~e~gg~~~~iV~~dad-----l~~aa~~i~~~~~~~~Gq~C~a~~~i~ 222 (414)
+++++|.||||.++|+.|++.+ +..+++|+++|+|||||+||++||| ++.|++.+++++|.|+||.|++++|||
T Consensus 224 ~~i~~v~FTGS~~~G~~i~~~~~a~~~~~~~~lELGGknp~IV~~DAd~~~~dld~aa~~i~~~~f~~aGQ~C~a~~rv~ 303 (675)
T PRK11563 224 DGQDVVTFTGSAATAQKLRAHPNVVANSVPFTAEADSLNAAILGPDATPGTPEFDLFVKEVVREMTVKAGQKCTAIRRAI 303 (675)
T ss_pred CCCCEEEEECcHHHHHHHHhhhhhhhCCceEEEecCCcCceEECCCCCcCchhHHHHHHHHHHHHHHhCCCccccceeEE
Confidence 6799999999999999999852 2278999999999999999999995 999999999999999999999999999
Q ss_pred EeCchHHHHHHHHHHHHhhcccCCCCCCCCcccccCCHHHHHHHHHHHHHHHHcCCEEEeCCccc-------CCCCceee
Q 015042 223 VQEGIYDKFEKKLLEKAKAWLVGDPFDPTVRQGPQISERHFDRILSYIEHGKREGATLLTGGKPI-------GDKGYYIE 295 (414)
Q Consensus 223 V~~~i~d~f~~~l~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ga~v~~gg~~~-------~~~g~~~~ 295 (414)
||+++||+|+++|+++++++++|+|.++++++||++++.+++++.+++++++++ +++++||... ...|+|++
T Consensus 304 V~~~i~d~f~~~l~~~~~~l~vG~p~d~~t~~GPli~~~~~~~i~~~i~~a~~~-a~vl~Gg~~~~~~~~~~~~~g~f~~ 382 (675)
T PRK11563 304 VPRALVDAVIEALRARLAKVVVGDPRLEGVRMGALASLEQREDVREKVAALLAA-AEIVFGGPDSFEVVGADAEKGAFFP 382 (675)
T ss_pred eeHHHHHHHHHHHHHHHhcCccCCCCCCCCcccCCcCHHHHHHHHHHHHHHHhC-CEEEECCcccccccCCCCCCCeeEC
Confidence 999999999999999999999999999999999999999999999999999998 9999999632 13589999
Q ss_pred eEEEeeCCC--cccccccceecceEEEEeeCCHHHHHHHhhcCCCCceEEEecCCHHHHHHHHHhcc--eeEEEEcCcCC
Q 015042 296 PTIFTNVKE--DMIIAKEEIFGPVMALMKFKTVEEAIKSANNTQYGLAAGIVTKDLNVANTVSRSIR--AGIIWINCYFG 371 (414)
Q Consensus 296 Ptvl~~~~~--~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~sv~s~d~~~~~~~~~~l~--~g~v~iN~~~~ 371 (414)
|||+.++++ ++.+++||+||||++|++|+|.+|||+++|+++|||++||||+|.+.+.+++++++ +|.||||+.+.
T Consensus 383 PTvl~~v~~~~~~~i~~eEiFGPVl~V~~~~~~~eai~~aN~s~~gL~asvft~d~~~a~~~~~~l~~~~G~v~iN~~~~ 462 (675)
T PRK11563 383 PTLLYCDDPLEAPAVHDVEAFGPVSTLMPYDDLDEAIELAARGKGSLVASLVTADPEVARELVLGAAPWHGRLLVLNRES 462 (675)
T ss_pred CEEEeccCchhhhhHhhccccCCceEEEecCCHHHHHHHHhcCCCCceEEEEeCCHHHHHHHHHHHHhcCCEEEEcCccc
Confidence 999999998 57899999999999999999999999999999999999999999999999999997 99999997531
Q ss_pred ---------CCCCCCcccCCCCCCCcc-chHHHHHhhheeeEEEe
Q 015042 372 ---------FSMDCPYGGYKMSGFGRE-YGLESLYKYLQIKSVVT 406 (414)
Q Consensus 372 ---------~~~~~p~gG~~~sG~g~~-~g~~~~~~~~~~k~i~~ 406 (414)
..+.+||||+|.||+|++ +|.+++++|+++|+|..
T Consensus 463 ~~~~~~~~~~~~~~pfGG~k~SG~G~~~~g~~~~~~f~~~k~~~~ 507 (675)
T PRK11563 463 AKESTGHGSPLPQLVHGGPGRAGGGEELGGLRGVKHYMQRTAVQG 507 (675)
T ss_pred cccccCCCCCCcCCCcCCCCCCCCCccccchhHHHHhheeeeeec
Confidence 125789999999999998 46999999999999854
|
|
| >PRK11904 bifunctional proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-80 Score=669.10 Aligned_cols=404 Identities=32% Similarity=0.481 Sum_probs=375.3
Q ss_pred CHHHHHHHHHhHHHHHHHHHHhcCCChHHHhhchHHHHHHHHHHHHHhhhhhcCc--ccccCCCcccceeecCCceEEEE
Q 015042 1 MWKFADLIEEHVEELAALDALDAGKVYLRAKTAEIPGAAEFLRFFAGAADKIHGE--VLKMSSELQGYTLREPVGVVGHI 78 (414)
Q Consensus 1 L~~~a~~l~~~~~~l~~~~~~etGk~~~e~~~~ei~~~~~~l~~~a~~~~~~~~~--~~~~~~~~~~~~~~~P~Gvv~~i 78 (414)
|+++++.|++++++|+.++++|+||++.++ ..|+..+++.++|++..+.+..+. ..+...+..++.+++|+|||++|
T Consensus 613 L~kaAdll~~~~~eL~~l~~~E~GK~~~~a-~~EV~eaid~lr~ya~~a~~~~~~~~~l~g~~ge~n~~~~~P~GVv~~I 691 (1038)
T PRK11904 613 LERAADLLEANRAELIALCVREAGKTLQDA-IAEVREAVDFCRYYAAQARRLFGAPEKLPGPTGESNELRLHGRGVFVCI 691 (1038)
T ss_pred HHHHHHHHHHhHHHHHHHHHHHhCCCHHHH-HHHHHHHHHHHHHHHHHHHHhhCCCcccCCCCCceeEEEEecceEEEEE
Confidence 578999999999999999999999999975 569999999999999988776543 23444577889999999999999
Q ss_pred cCCccchHHHHHhHHHHHhhCCeEEeecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhhHHHhhhCCCccEEEEeC
Q 015042 79 IPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLTALYYAHLAKLAGIPDGVLNVVPGFGPTAGAAICSHMDIDYVCFTG 158 (414)
Q Consensus 79 ~p~n~P~~~~~~~~~~aLaaGN~vv~kps~~~~~~~~~l~~~l~~aG~p~g~v~~v~~~~~~~~~~l~~~~~v~~v~~tG 158 (414)
+|||||+...++++++||++||+||+|||+.+|+++..+.+++.++|+|+|++|++++++.++++.|+.||+|+.|.|||
T Consensus 692 sPwNfPlai~~~~i~aALaaGNtVIlKPse~tpl~a~~l~~ll~eAGlP~gvl~lv~G~g~~vg~~Lv~~p~v~~V~FTG 771 (1038)
T PRK11904 692 SPWNFPLAIFLGQVAAALAAGNTVIAKPAEQTPLIAAEAVKLLHEAGIPKDVLQLLPGDGATVGAALTADPRIAGVAFTG 771 (1038)
T ss_pred CCCccHHHHHHHHHHHHHHcCCEEEeeCCCcCHHHHHHHHHHHHHhCcCcceEEEeeCCchHHHHHHhcCCCcCeEEEEC
Confidence 99999999999999999999999999999999999999999999999999999999998878999999999999999999
Q ss_pred CcHHHHHHHHHHHhc--ccceeEEEcCCCCCceEcCCCCHHHHHHHHHHHhhccCCCCcccCceEEEeCchHHHHHHHHH
Q 015042 159 STDVGRLVMQAAAAS--NLKQVSLELGGKSPLLIFDDADLDTAADVALLGNLYNKGEICVASSRVFVQEGIYDKFEKKLL 236 (414)
Q Consensus 159 s~~~g~~i~~~~a~~--~~~~~~~e~gg~~~~iV~~dadl~~aa~~i~~~~~~~~Gq~C~a~~~i~V~~~i~d~f~~~l~ 236 (414)
|+.+|+.|.+.++.+ ..+|+++|+|||||+||++|||++.|++.+++|+|.++||.|++++++|||++++|+|++.|+
T Consensus 772 S~~~g~~I~~~~A~~~g~~~pvi~ElGGkNa~IV~~dAdld~Av~~iv~saF~~aGQ~CsA~~rl~V~~si~d~fl~~L~ 851 (1038)
T PRK11904 772 STETARIINRTLAARDGPIVPLIAETGGQNAMIVDSTALPEQVVDDVVTSAFRSAGQRCSALRVLFVQEDIADRVIEMLK 851 (1038)
T ss_pred CHHHHHHHHHHHhhccCCCceEEEEcCCcCeEEECCCCCHHHHHHHHHHHHHhCCCCccccCcEEEEeHHHHHHHHHHHH
Confidence 999999999888732 267999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhhcccCCCCCCCCcccccCCHHHHHHHHHHHHHHHHcCCEEEeCCcccC--CCCceeeeEEEeeCCCccccccccee
Q 015042 237 EKAKAWLVGDPFDPTVRQGPQISERHFDRILSYIEHGKREGATLLTGGKPIG--DKGYYIEPTIFTNVKEDMIIAKEEIF 314 (414)
Q Consensus 237 ~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~--~~g~~~~Ptvl~~~~~~~~~~~~E~f 314 (414)
+.++++++|+|.++++++||++++.+++++.++++++++ |+++++||...+ ..|+|+.|||+. .+++.+++||+|
T Consensus 852 ~~~~~l~vGdp~d~~t~~GPvI~~~a~~~l~~~I~~a~~-ga~vl~gg~~~~~~~~G~fv~PTvi~--~~~~~~~~eEiF 928 (1038)
T PRK11904 852 GAMAELKVGDPRLLSTDVGPVIDAEAKANLDAHIERMKR-EARLLAQLPLPAGTENGHFVAPTAFE--IDSISQLEREVF 928 (1038)
T ss_pred HHHHhccCCCcccccCCccCCCCHHHHHHHHHHHHHHHc-CCEEEeCCCCCCCCCCceEEeeEEEc--cCCcHHhCCCCc
Confidence 999999999999999999999999999999999999876 889999987643 259999999996 357788999999
Q ss_pred cceEEEEeeC--CHHHHHHHhhcCCCCceEEEecCCHHHHHHHHHhcceeEEEEcCcCC--CCCCCCcccCCCCCCC-cc
Q 015042 315 GPVMALMKFK--TVEEAIKSANNTQYGLAAGIVTKDLNVANTVSRSIRAGIIWINCYFG--FSMDCPYGGYKMSGFG-RE 389 (414)
Q Consensus 315 gPvl~v~~~~--~~~eai~~~n~~~~gl~~sv~s~d~~~~~~~~~~l~~g~v~iN~~~~--~~~~~p~gG~~~sG~g-~~ 389 (414)
|||++|++|+ +++|||+++|+++|||+++|||+|.+.++++++++++|+||||+... ..+.+||||+|.||+| +.
T Consensus 929 GPVL~V~~~~~~~ldeaI~~iN~t~yGLt~~IfS~d~~~~~~~~~~l~aG~vyIN~~~~ga~vg~qPFGG~~~SG~G~ka 1008 (1038)
T PRK11904 929 GPILHVIRYKASDLDKVIDAINATGYGLTLGIHSRIEETADRIADRVRVGNVYVNRNQIGAVVGVQPFGGQGLSGTGPKA 1008 (1038)
T ss_pred CcEEEEEEeCCCCHHHHHHHHhCCCCCCEEEEEcCCHHHHHHHHHhCCEEEEEEeCCCccCCCCCCCCCCCCCCCCCCcc
Confidence 9999999998 69999999999999999999999999999999999999999998765 3456899999999999 68
Q ss_pred chHHHHHhhheeeEEEeeC
Q 015042 390 YGLESLYKYLQIKSVVTPI 408 (414)
Q Consensus 390 ~g~~~~~~~~~~k~i~~~~ 408 (414)
+|++++++|++.|+|+++.
T Consensus 1009 GG~~~L~~f~~~ktv~~~~ 1027 (1038)
T PRK11904 1009 GGPHYLLRFATEKTVTVNT 1027 (1038)
T ss_pred chHHHHHHHhceEEEEEcc
Confidence 8999999999999998765
|
|
| >PRK11809 putA trifunctional transcriptional regulator/proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.2e-78 Score=655.23 Aligned_cols=388 Identities=30% Similarity=0.486 Sum_probs=361.6
Q ss_pred CHHHHHHHHHhHHHHHHHHHHhcCCChHHHhhchHHHHHHHHHHHHHhhhhhcCcccccCCCcccceeecCCceEEEEcC
Q 015042 1 MWKFADLIEEHVEELAALDALDAGKVYLRAKTAEIPGAAEFLRFFAGAADKIHGEVLKMSSELQGYTLREPVGVVGHIIP 80 (414)
Q Consensus 1 L~~~a~~l~~~~~~l~~~~~~etGk~~~e~~~~ei~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p 80 (414)
|+++++.|++|+++|+.++++|+||+..++ ..|+..+++.++||+..+.... ....++|+|||++|+|
T Consensus 710 L~r~Adlle~~~~eL~~l~~~EaGKt~~~A-~~EV~eaidflryyA~~a~~~~-----------~~~~~~PlGVV~~IsP 777 (1318)
T PRK11809 710 LERAADLMEAQMQTLMGLLVREAGKTFSNA-IAEVREAVDFLRYYAGQVRDDF-----------DNDTHRPLGPVVCISP 777 (1318)
T ss_pred HHHHHHHHHHCHHHHHHHHHHHhCCCHHHH-HHHHHHHHHHHHHHHHHHHHhc-----------CCceeecccEEEEECC
Confidence 578999999999999999999999999975 5699999999999998765421 1246899999999999
Q ss_pred CccchHHHHHhHHHHHhhCCeEEeecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhhHHHhhhCCCccEEEEeCCc
Q 015042 81 WNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLTALYYAHLAKLAGIPDGVLNVVPGFGPTAGAAICSHMDIDYVCFTGST 160 (414)
Q Consensus 81 ~n~P~~~~~~~~~~aLaaGN~vv~kps~~~~~~~~~l~~~l~~aG~p~g~v~~v~~~~~~~~~~l~~~~~v~~v~~tGs~ 160 (414)
||||+..+++++++||++||+||+|||+++|+++..+++++.++|+|+|++|++++.+.++++.|+.||+|+.|+||||+
T Consensus 778 WNFPlai~~g~iaaALaAGN~VV~KPseqTpl~a~~lv~ll~eAGlP~gvlqlv~G~g~~vg~~Lv~~p~V~~V~FTGSt 857 (1318)
T PRK11809 778 WNFPLAIFTGQVAAALAAGNSVLAKPAEQTPLIAAQAVRILLEAGVPAGVVQLLPGRGETVGAALVADARVRGVMFTGST 857 (1318)
T ss_pred CccHHHHHHHHHHHHHHcCCeEEEeCCCCcHHHHHHHHHHHHHhCcCcCeEEEeeCCcHHHHHHHhcCCCcCEEEEeCCH
Confidence 99999999999999999999999999999999999999999999999999999999888889999999999999999999
Q ss_pred HHHHHHHHHHHhccc------ceeEEEcCCCCCceEcCCCCHHHHHHHHHHHhhccCCCCcccCceEEEeCchHHHHHHH
Q 015042 161 DVGRLVMQAAAASNL------KQVSLELGGKSPLLIFDDADLDTAADVALLGNLYNKGEICVASSRVFVQEGIYDKFEKK 234 (414)
Q Consensus 161 ~~g~~i~~~~a~~~~------~~~~~e~gg~~~~iV~~dadl~~aa~~i~~~~~~~~Gq~C~a~~~i~V~~~i~d~f~~~ 234 (414)
.+|+.|.+.++ .++ +|+++|+||+|++||++|||++.|++.+++|+|.++||.|++++++|||++++|+|++.
T Consensus 858 ~tg~~I~~~aA-~~l~~~g~~~pliaElGGkNa~IVdsdAdle~Av~~iv~sAF~~aGQrCsA~~rl~V~e~Iad~fl~~ 936 (1318)
T PRK11809 858 EVARLLQRNLA-GRLDPQGRPIPLIAETGGQNAMIVDSSALTEQVVADVLASAFDSAGQRCSALRVLCLQDDVADRTLKM 936 (1318)
T ss_pred HHHHHHHHHHh-hhcccccCceeEEEecCCccceEECCCCCHHHHHHHHHHHHHhcCCCccccCcEEEEcHHHHHHHHHH
Confidence 99999999887 444 79999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhhcccCCCCCCCCcccccCCHHHHHHHHHHHHHHHHcCCEEEeCCcccC---CCCceeeeEEEeeCCCccccccc
Q 015042 235 LLEKAKAWLVGDPFDPTVRQGPQISERHFDRILSYIEHGKREGATLLTGGKPIG---DKGYYIEPTIFTNVKEDMIIAKE 311 (414)
Q Consensus 235 l~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~---~~g~~~~Ptvl~~~~~~~~~~~~ 311 (414)
|++.++++++|+|.+.++++||+++..+++++.++|++++++|++++.++.... ..|+|++|||+.. +++.++++
T Consensus 937 L~~a~~~l~vGdP~~~~tdvGPvId~~a~~~i~~~I~~a~~~G~~v~~g~~~~~~~~~~G~fv~PTIi~~--~~~~~l~e 1014 (1318)
T PRK11809 937 LRGAMAECRMGNPDRLSTDIGPVIDAEAKANIERHIQAMRAKGRPVFQAARENSEDWQSGTFVPPTLIEL--DSFDELKR 1014 (1318)
T ss_pred HHHHHHhcCCCCcccccCCcCCCCCHHHHHHHHHHHHHHHHcCCEEEecCCCCCCCCCCCeEEeeEEEec--cchhhhcC
Confidence 999999999999999999999999999999999999999999999998875432 4699999999973 56788999
Q ss_pred ceecceEEEEeeC--CHHHHHHHhhcCCCCceEEEecCCHHHHHHHHHhcceeEEEEcCcCCC--CCCCCcccCCCCCCC
Q 015042 312 EIFGPVMALMKFK--TVEEAIKSANNTQYGLAAGIVTKDLNVANTVSRSIRAGIIWINCYFGF--SMDCPYGGYKMSGFG 387 (414)
Q Consensus 312 E~fgPvl~v~~~~--~~~eai~~~n~~~~gl~~sv~s~d~~~~~~~~~~l~~g~v~iN~~~~~--~~~~p~gG~~~sG~g 387 (414)
|+||||+.|++|+ +++|+|+++|+++|||+++|||+|.+.++++++++++|+||||+.... .+.+||||+|.||+|
T Consensus 1015 EiFGPVL~V~~~~~~~ldeaI~~iN~t~yGLt~gV~Srd~~~~~~v~~~l~aGnvyINr~~~gavvg~qPFGG~g~SG~G 1094 (1318)
T PRK11809 1015 EVFGPVLHVVRYNRNQLDELIEQINASGYGLTLGVHTRIDETIAQVTGSAHVGNLYVNRNMVGAVVGVQPFGGEGLSGTG 1094 (1318)
T ss_pred cccCceEEEEEeCCCCHHHHHHHHhcCCCCceEEEEeCCHHHHHHHHHhCCEeEEEECCCCcCCCcCCCCCCCcCcCCCC
Confidence 9999999999996 799999999999999999999999999999999999999999987652 356799999999999
Q ss_pred -ccchHHHHHhhheeeE
Q 015042 388 -REYGLESLYKYLQIKS 403 (414)
Q Consensus 388 -~~~g~~~~~~~~~~k~ 403 (414)
+.+|++++.+|++.+.
T Consensus 1095 ~kaGGp~yL~~f~~~~~ 1111 (1318)
T PRK11809 1095 PKAGGPLYLYRLLATRP 1111 (1318)
T ss_pred CCCCCHHHHHHHhccCC
Confidence 5899999999999873
|
|
| >cd07126 ALDH_F12_P5CDH Delta(1)-pyrroline-5-carboxylate dehydrogenase, ALDH family 12 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-77 Score=604.32 Aligned_cols=381 Identities=23% Similarity=0.287 Sum_probs=342.0
Q ss_pred CHHHHHHHHHh--HHHHHHHHHHhcCCChHHHhhchHHHHHHHHHHHHHhhhhhcCccc--cc-CCCcccceeecCCceE
Q 015042 1 MWKFADLIEEH--VEELAALDALDAGKVYLRAKTAEIPGAAEFLRFFAGAADKIHGEVL--KM-SSELQGYTLREPVGVV 75 (414)
Q Consensus 1 L~~~a~~l~~~--~~~l~~~~~~etGk~~~e~~~~ei~~~~~~l~~~a~~~~~~~~~~~--~~-~~~~~~~~~~~P~Gvv 75 (414)
|+++++.|+++ .++|++++++|+|||..++ ..|+..+++.+++++....+..+... +. ..+...+++++|+|||
T Consensus 68 l~~~a~~l~~~~~~~~la~~~~~e~GK~~~~a-~~Ev~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~v~r~P~GVV 146 (489)
T cd07126 68 SHRVAHELRKPEVEDFFARLIQRVAPKSDAQA-LGEVVVTRKFLENFAGDQVRFLARSFNVPGDHQGQQSSGYRWPYGPV 146 (489)
T ss_pred HHHHHHHHHcCCCHHHHHHHHHHHcCCCHHHH-HHHHHHHHHHHHHHHHHHHHhcCceeccCCCCCCceeEEEEecceEE
Confidence 56899999998 4999999999999999875 56999999999999988766554432 21 1245678999999999
Q ss_pred EEEcCCccchHHHHHhHHHHHhhCCeEEeecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhhHHHhhhCCCccEEE
Q 015042 76 GHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLTALYYAHLAKLAGIPDGVLNVVPGFGPTAGAAICSHMDIDYVC 155 (414)
Q Consensus 76 ~~i~p~n~P~~~~~~~~~~aLaaGN~vv~kps~~~~~~~~~l~~~l~~aG~p~g~v~~v~~~~~~~~~~l~~~~~v~~v~ 155 (414)
++|+|||||+...++++++||++||+||+|||+.+|+++.++.+++.++|+|+|++|++++.+.+ +..++.|+++|+|.
T Consensus 147 ~~I~PwNfP~~l~~~~ia~ALaaGN~VVlKPSe~tp~~~~~l~~~~~~aGlP~gv~~vv~G~~~~-~~~l~~~~~v~~V~ 225 (489)
T cd07126 147 AIITPFNFPLEIPALQLMGALFMGNKPLLKVDSKVSVVMEQFLRLLHLCGMPATDVDLIHSDGPT-MNKILLEANPRMTL 225 (489)
T ss_pred EEECCCchHHHHHHHHHHHHHHcCCEEEEECCCCCCHHHHHHHHHHHHhCcCcCcEEEEeCCchh-HHHHhcCCCCCEEE
Confidence 99999999999999999999999999999999999999999999999999999999999986554 45678899999999
Q ss_pred EeCCcHHHHHHHHHHHhcccceeEEEcCCCCCceEcCCC-CHHHHHHHHHHHhhccCCCCcccCceEEEeCch-HHHHHH
Q 015042 156 FTGSTDVGRLVMQAAAASNLKQVSLELGGKSPLLIFDDA-DLDTAADVALLGNLYNKGEICVASSRVFVQEGI-YDKFEK 233 (414)
Q Consensus 156 ~tGs~~~g~~i~~~~a~~~~~~~~~e~gg~~~~iV~~da-dl~~aa~~i~~~~~~~~Gq~C~a~~~i~V~~~i-~d~f~~ 233 (414)
||||+.+|+.|...++ +++.+|+||+||+||++|| |++.|++.+++++|.|+||.|++++|+|||+++ +|+|++
T Consensus 226 FTGS~~vGr~i~~~~g----~k~~lElgg~~~~IV~~Da~dld~a~~~~~~g~f~naGQ~C~a~~rv~V~~~i~~d~f~~ 301 (489)
T cd07126 226 FTGSSKVAERLALELH----GKVKLEDAGFDWKILGPDVSDVDYVAWQCDQDAYACSGQKCSAQSILFAHENWVQAGILD 301 (489)
T ss_pred EECCHHHHHHHHHHhC----CCEEeecCCCCceEECCCcccHHHHHHHHHHHHHhcCCCcCCCCceEEEeCcchHHHHHH
Confidence 9999999999988765 5799999999999999999 999999999999999999999999999999995 699999
Q ss_pred HHHHHHhhcccCCCCCCCCcccccCCHHHHHHHHHHHHHHHH-cCCEEEeCCcccCC----CC-ceeeeEEEee------
Q 015042 234 KLLEKAKAWLVGDPFDPTVRQGPQISERHFDRILSYIEHGKR-EGATLLTGGKPIGD----KG-YYIEPTIFTN------ 301 (414)
Q Consensus 234 ~l~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~-~ga~v~~gg~~~~~----~g-~~~~Ptvl~~------ 301 (414)
+|++.++++++|+ +++||+++.. .+++.++++++++ +|+++++||..... .+ .|++|||+..
T Consensus 302 ~l~~~~~~~~~g~-----~~~Gpli~~~-~~~v~~~i~~a~~~~Ga~~l~GG~~~~~~~~~~~~~~~~PTvl~~~~~~~~ 375 (489)
T cd07126 302 KLKALAEQRKLED-----LTIGPVLTWT-TERILDHVDKLLAIPGAKVLFGGKPLTNHSIPSIYGAYEPTAVFVPLEEIA 375 (489)
T ss_pred HHHHHHHhcccCC-----CcCCCCcCHH-HHHHHHHHHHHHhCCCCEEEeCCcccccccccCCcceecCeEEEecccccc
Confidence 9999999998874 4789999998 9999999999997 89999999976432 23 3899999952
Q ss_pred CCCcccccccceecceEEEEeeCC--HHHHHHHhhcCCCCceEEEecCCHHHHHHHHHhcceeE--EEEcCcCCCCCC--
Q 015042 302 VKEDMIIAKEEIFGPVMALMKFKT--VEEAIKSANNTQYGLAAGIVTKDLNVANTVSRSIRAGI--IWINCYFGFSMD-- 375 (414)
Q Consensus 302 ~~~~~~~~~~E~fgPvl~v~~~~~--~~eai~~~n~~~~gl~~sv~s~d~~~~~~~~~~l~~g~--v~iN~~~~~~~~-- 375 (414)
++++|.+++||+||||++|++|+| ++||++++|+++|||++||||+|.++++++++++++|. |+||+.+...+.
T Consensus 376 ~~~~~~i~~eEiFGPVl~V~~~~~~~~deai~~aN~~~~gL~~~vft~d~~~~~~~~~~~~~G~~~v~~n~~~~~~~~~~ 455 (489)
T cd07126 376 IEENFELVTTEVFGPFQVVTEYKDEQLPLVLEALERMHAHLTAAVVSNDIRFLQEVLANTVNGTTYAGIRARTTGAPQNH 455 (489)
T ss_pred CCCCCHHHhCCCcCCEEEEEEECCCCHHHHHHHHhCCCCCceEEEEeCCHHHHHHHHHhCCcceEEEEecCCCCCCCccc
Confidence 567999999999999999999999 99999999999999999999999999999999999999 669987764443
Q ss_pred --CCcccCCCCCCCccchHH
Q 015042 376 --CPYGGYKMSGFGREYGLE 393 (414)
Q Consensus 376 --~p~gG~~~sG~g~~~g~~ 393 (414)
.||||.|.||+|+.+...
T Consensus 456 ~~~pfgg~k~sg~g~~~~~~ 475 (489)
T cd07126 456 WFGPAGDPRGAGIGTPEAIR 475 (489)
T ss_pred CcCCCCCCcccCCCCHhHHH
Confidence 999999999999877644
|
Delta(1)-pyrroline-5-carboxylate dehydrogenase (P5CDH, EC=1.5.1.12), family 12: a proline catabolic enzyme of the aldehyde dehydrogenase (ALDH) protein superfamily. P5CDH is a mitochondrial enzyme involved in proline degradation and catalyzes the NAD + -dependent conversion of P5C to glutamate. The P5CDH, ALDH12A1 gene, in Arabidopsis, has been identified as an osmotic-stress-inducible ALDH gene. This CD contains both Viridiplantae and Alveolata P5CDH sequences. |
| >cd07078 ALDH NAD(P)+ dependent aldehyde dehydrogenase family | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.7e-77 Score=600.75 Aligned_cols=403 Identities=51% Similarity=0.831 Sum_probs=379.2
Q ss_pred CHHHHHHHHHhHHHHHHHHHHhcCCChHHHhhchHHHHHHHHHHHHHhhhhhcCcc-cccCCCcccceeecCCceEEEEc
Q 015042 1 MWKFADLIEEHVEELAALDALDAGKVYLRAKTAEIPGAAEFLRFFAGAADKIHGEV-LKMSSELQGYTLREPVGVVGHII 79 (414)
Q Consensus 1 L~~~a~~l~~~~~~l~~~~~~etGk~~~e~~~~ei~~~~~~l~~~a~~~~~~~~~~-~~~~~~~~~~~~~~P~Gvv~~i~ 79 (414)
|+++++.|.+++++|+++++.|+||+..+ ...|+..+++.+++++...++..+.. .....+...+.+++|+|||++|+
T Consensus 26 l~~~~~~l~~~~~~l~~~~~~etG~~~~~-~~~ei~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~ 104 (432)
T cd07078 26 LRKLADLLEERREELAALETLETGKPIEE-ALGEVARAADTFRYYAGLARRLHGEVIPSPDPGELAIVRREPLGVVGAIT 104 (432)
T ss_pred HHHHHHHHHHhHHHHHHHHHHHcCCCHHH-HHHHHHHHHHHHHHHHHHHHHhcCccccccCCCceEEEEEeecceEEEEC
Confidence 57899999999999999999999999875 56799999999999988877654443 22234667889999999999999
Q ss_pred CCccchHHHHHhHHHHHhhCCeEEeecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhhHHHhhhCCCccEEEEeCC
Q 015042 80 PWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLTALYYAHLAKLAGIPDGVLNVVPGFGPTAGAAICSHMDIDYVCFTGS 159 (414)
Q Consensus 80 p~n~P~~~~~~~~~~aLaaGN~vv~kps~~~~~~~~~l~~~l~~aG~p~g~v~~v~~~~~~~~~~l~~~~~v~~v~~tGs 159 (414)
|||+|+...++.+++||++||+||+|||+.+|.++..+.++|.++|+|+++++++++++.+.+..|..|+++|.|.||||
T Consensus 105 p~N~P~~~~~~~~~~AL~aGN~vilkps~~~~~~~~~l~~~l~~ag~p~~~~~~~~~~~~~~~~~l~~~~~i~~v~ftGs 184 (432)
T cd07078 105 PWNFPLLLAAWKLAPALAAGNTVVLKPSELTPLTALLLAELLAEAGLPPGVLNVVTGDGDEVGAALASHPRVDKISFTGS 184 (432)
T ss_pred CCccHHHHHHHHHHHHHHcCCEEEEECCCCChHHHHHHHHHHHHcCCCcCcEEEEecCchHHHHHHhcCCCCCEEEEECc
Confidence 99999999999999999999999999999999999999999999999999999999866668899999999999999999
Q ss_pred cHHHHHHHHHHHhcccceeEEEcCCCCCceEcCCCCHHHHHHHHHHHhhccCCCCcccCceEEEeCchHHHHHHHHHHHH
Q 015042 160 TDVGRLVMQAAAASNLKQVSLELGGKSPLLIFDDADLDTAADVALLGNLYNKGEICVASSRVFVQEGIYDKFEKKLLEKA 239 (414)
Q Consensus 160 ~~~g~~i~~~~a~~~~~~~~~e~gg~~~~iV~~dadl~~aa~~i~~~~~~~~Gq~C~a~~~i~V~~~i~d~f~~~l~~~~ 239 (414)
..+++.|.+.++ ++++|+++|+||+|++||++|+|++.|++.+++++|.++||.|+++++||||++++|+|+++|++.+
T Consensus 185 ~~~~~~v~~~a~-~~~~~~~~e~gg~~~~iV~~~ad~~~aa~~i~~~~~~~~Gq~C~a~~~i~v~~~~~~~~~~~L~~~l 263 (432)
T cd07078 185 TAVGKAIMRAAA-ENLKRVTLELGGKSPLIVFDDADLDAAVKGAVFGAFGNAGQVCTAASRLLVHESIYDEFVERLVERV 263 (432)
T ss_pred HHHHHHHHHHHh-hccCcEEEecCCCCeeEECCCCCHHHHHHHHHHHHHhccCCCccCCceEEEcHHHHHHHHHHHHHHH
Confidence 999999999988 7899999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhcccCCCCCCCCcccccCCHHHHHHHHHHHHHHHHcCCEEEeCCcccCC-CCceeeeEEEeeCCCcccccccceecceE
Q 015042 240 KAWLVGDPFDPTVRQGPQISERHFDRILSYIEHGKREGATLLTGGKPIGD-KGYYIEPTIFTNVKEDMIIAKEEIFGPVM 318 (414)
Q Consensus 240 ~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~~-~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl 318 (414)
+++++|+|.++++++||++++.+++++.++++++.+.|+++++||..... .|+|++|||+.+++++++++++|+||||+
T Consensus 264 ~~~~~g~p~~~~~~~~~~~~~~~~~~~~~~i~~~~~~g~~~~~gg~~~~~~~g~~~~Ptv~~~~~~~~~~~~~E~fgPvl 343 (432)
T cd07078 264 KALKVGNPLDPDTDMGPLISAAQLDRVLAYIEDAKAEGAKLLCGGKRLEGGKGYFVPPTVLTDVDPDMPIAQEEIFGPVL 343 (432)
T ss_pred HccCcCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHhCCCEEEeCCccCCCCCCcEEccEEEecCCCCChhhhCCCcCceE
Confidence 99999999999999999999999999999999999999999999876533 58999999999999999999999999999
Q ss_pred EEEeeCCHHHHHHHhhcCCCCceEEEecCCHHHHHHHHHhcceeEEEEcCcCCC-CCCCCcccCCCCCCCccchHHHHHh
Q 015042 319 ALMKFKTVEEAIKSANNTQYGLAAGIVTKDLNVANTVSRSIRAGIIWINCYFGF-SMDCPYGGYKMSGFGREYGLESLYK 397 (414)
Q Consensus 319 ~v~~~~~~~eai~~~n~~~~gl~~sv~s~d~~~~~~~~~~l~~g~v~iN~~~~~-~~~~p~gG~~~sG~g~~~g~~~~~~ 397 (414)
+|++|++++|||+++|+.++||++||||+|.+.++++++++++|+|+||++... .+.+||||.|.||+|+++|++|+++
T Consensus 344 ~v~~~~~~~eai~~~n~~~~~l~~~i~t~d~~~~~~~~~~~~~g~v~iN~~~~~~~~~~pfgG~~~sg~g~~~g~~~~~~ 423 (432)
T cd07078 344 PVIPFKDEEEAIELANDTEYGLAAGVFTRDLERALRVAERLEAGTVWINDYSVGAEPSAPFGGVKQSGIGREGGPYGLEE 423 (432)
T ss_pred EEEEeCCHHHHHHHHhCCCcCceEEEECCCHHHHHHHHHhcCcceEEECCCCCCCCCCCCcCCcCcCcCCccchHHHHHH
Confidence 999999999999999999999999999999999999999999999999998876 7889999999999999999999999
Q ss_pred hheeeEEE
Q 015042 398 YLQIKSVV 405 (414)
Q Consensus 398 ~~~~k~i~ 405 (414)
|++.|+|+
T Consensus 424 ~~~~k~v~ 431 (432)
T cd07078 424 YTEPKTVT 431 (432)
T ss_pred hhceEEEE
Confidence 99999985
|
The aldehyde dehydrogenase family (ALDH) of NAD(P)+ dependent enzymes, in general, oxidize a wide range of endogenous and exogenous aliphatic and aromatic aldehydes to their corresponding carboxylic acids and play an important role in detoxification. Besides aldehyde detoxification, many ALDH isozymes possess multiple additional catalytic and non-catalytic functions such as participating in metabolic pathways, or as binding proteins, or as osmoregulants, to mention a few. The enzyme has three domains, a NAD(P)+ cofactor-binding domain, a catalytic domain, and a bridging domain; and the active enzyme is generally either homodimeric or homotetrameric. The catalytic mechanism is proposed to involve cofactor binding, resulting in a conformational change and activation of an invariant catalytic cysteine nucleophile. The cysteine and aldehyde substrate form an oxyanion thiohemiacetal intermediate resulting in hydride transfer |
| >KOG2456 consensus Aldehyde dehydrogenase [Energy production and conversion] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-78 Score=565.50 Aligned_cols=397 Identities=28% Similarity=0.429 Sum_probs=361.6
Q ss_pred CHHHHHHHHHhHHHHHHHHHHhcCCChHHHhhchHHHHHHHHHHHHHhhhhhcCc-ccc---cCCCcccceeecCCceEE
Q 015042 1 MWKFADLIEEHVEELAALDALDAGKVYLRAKTAEIPGAAEFLRFFAGAADKIHGE-VLK---MSSELQGYTLREPVGVVG 76 (414)
Q Consensus 1 L~~~a~~l~~~~~~l~~~~~~etGk~~~e~~~~ei~~~~~~l~~~a~~~~~~~~~-~~~---~~~~~~~~~~~~P~Gvv~ 76 (414)
|+++...+++|.++|.+++..|.+|+..|+...|+...++.++++....++.... ..+ .....+.+++.+|+|||+
T Consensus 30 L~~L~r~i~e~e~~i~~Al~~DL~k~~~es~~~Ev~~~~~~i~~~l~~L~~wv~~~~v~~~~~t~~dk~~I~~~p~GvVL 109 (477)
T KOG2456|consen 30 LEALYRMIQENEKEIIEALAADLHKPELESYLNEVGYVLNEIRYALENLPEWVKPEPVKKSFLTFLDKAYIEKEPLGVVL 109 (477)
T ss_pred HHHHHHHHHhhHHHHHHHHHHHhccchhHHHHHHHHHHHHHHHHHHHhhHHhccccccCcccccccCceeEEecCCceEE
Confidence 5678899999999999999999999999988889999999888887655443221 111 123457889999999999
Q ss_pred EEcCCccchHHHHHhHHHHHhhCCeEEeecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhhHHHhhhCCCccEEEE
Q 015042 77 HIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLTALYYAHLAKLAGIPDGVLNVVPGFGPTAGAAICSHMDIDYVCF 156 (414)
Q Consensus 77 ~i~p~n~P~~~~~~~~~~aLaaGN~vv~kps~~~~~~~~~l~~~l~~aG~p~g~v~~v~~~~~~~~~~l~~~~~v~~v~~ 156 (414)
+|+|||||+...+.++++||+|||+||+|||+.+|.++..+++++-+. ++.+++.+|.|.-++. ..|+.| ++|+|.|
T Consensus 110 iI~~wNyP~~L~l~PligAiAAGN~VVlKPSEls~n~a~~lakllp~Y-ld~~~~~VV~Ggv~ET-t~LL~~-rfD~Ify 186 (477)
T KOG2456|consen 110 IIGPWNYPLNLTLVPLIGAIAAGNAVVLKPSELSPNTAKLLAKLLPQY-LDQDLIRVVNGGVPET-TELLKQ-RFDHIFY 186 (477)
T ss_pred EEccCCCcceeehhhhhhhhhcCCEEEechhhcChhHHHHHHHHHHHh-cCcceEEEecCCCchH-HHHHHh-hccEEEe
Confidence 999999999999999999999999999999999999999999999999 9999999999955554 455555 7999999
Q ss_pred eCCcHHHHHHHHHHHhcccceeEEEcCCCCCceEcCCCCHHHHHHHHHHHhhccCCCCcccCceEEEeCchHHHHHHHHH
Q 015042 157 TGSTDVGRLVMQAAAASNLKQVSLELGGKSPLLIFDDADLDTAADVALLGNLYNKGEICVASSRVFVQEGIYDKFEKKLL 236 (414)
Q Consensus 157 tGs~~~g~~i~~~~a~~~~~~~~~e~gg~~~~iV~~dadl~~aa~~i~~~~~~~~Gq~C~a~~~i~V~~~i~d~f~~~l~ 236 (414)
|||+.+|+.|+.+++ ++++|+++|+|||+|++|++++|++-++++|+++++.|+||.|.+|+.|+++.+++.+|+++++
T Consensus 187 TGsp~VgkIim~aAa-KhLTPvtLELGGKsP~~vd~~~d~~ia~~RI~~gk~~N~GQtCvapDYiL~~k~~~~kli~alk 265 (477)
T KOG2456|consen 187 TGSPRVGKIIMAAAA-KHLTPVTLELGGKSPCYVDKNCDLKIAARRIAWGKWMNSGQTCVAPDYILCSKSIQPKLIDALK 265 (477)
T ss_pred cCCchHHHHHHHHHH-hcCCcEEEEcCCCCCeeecCCcCHHHHHHHHHHHhhccCCCeeccCCeEEecHhhhHHHHHHHH
Confidence 999999999999998 9999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhhcccCCCCCCCCcccccCCHHHHHHHHHHHHHHHHcCCEEEeCCcccCCCCceeeeEEEeeCCCcccccccceecc
Q 015042 237 EKAKAWLVGDPFDPTVRQGPQISERHFDRILSYIEHGKREGATLLTGGKPIGDKGYYIEPTIFTNVKEDMIIAKEEIFGP 316 (414)
Q Consensus 237 ~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgP 316 (414)
..++++. |...+++.+++.+++..|++|+.++++.. .+++.||..+ +..+|++|||+.++++++++|+||+|||
T Consensus 266 ~~l~eFY-G~n~~eS~d~sRiIn~~hf~Rl~~ll~~~----~kv~~Gg~~d-~~d~~I~PTIL~DV~~~~p~M~eEIFGP 339 (477)
T KOG2456|consen 266 STLKEFY-GENPKESKDLSRIINQRHFQRLSALLDET----GKVAIGGESD-ESDRYIAPTILLDVPEDSPVMQEEIFGP 339 (477)
T ss_pred HHHHHHh-CCCccccccHHHHhhHHHHHHHHHHhcCC----CceecCCccc-hhhcccCCeEEecCCCCChhhhhhhccC
Confidence 9999985 66566889999999999999999988743 6899999865 4667999999999999999999999999
Q ss_pred eEEEEeeCCHHHHHHHhhcCCCCceEEEecCCHHHHHHHHHhcceeEEEEcCcCC--CCCCCCcccCCCCCCCccchHHH
Q 015042 317 VMALMKFKTVEEAIKSANNTQYGLAAGIVTKDLNVANTVSRSIRAGIIWINCYFG--FSMDCPYGGYKMSGFGREYGLES 394 (414)
Q Consensus 317 vl~v~~~~~~~eai~~~n~~~~gl~~sv~s~d~~~~~~~~~~l~~g~v~iN~~~~--~~~~~p~gG~~~sG~g~~~g~~~ 394 (414)
|++|+.|++++|+|+.+|..+..|++|+||+|.+..+++.+++.+|.|.+|+..+ ....+||||.|.||+|++||++|
T Consensus 340 iLPIi~v~~l~Eai~~In~~eKPLa~Y~Fs~n~~~vkr~l~~tsSGgvt~ND~i~H~~~~~lPFGGVG~SGmG~YhGK~s 419 (477)
T KOG2456|consen 340 ILPIITVQSLDEAINFINEREKPLALYIFSNNEKLVKRFLTETSSGGVTVNDVIMHVTLDSLPFGGVGESGMGRYHGKFS 419 (477)
T ss_pred ccceeEhhhHHHHHHHHhcCCCceEEEEecCCHHHHHHHHHhccCCCeeecceEEEEEeeccCcCCcCcccccccccccc
Confidence 9999999999999999999999999999999999999999999999999999865 44689999999999999999999
Q ss_pred HHhhheeeEEEee
Q 015042 395 LYKYLQIKSVVTP 407 (414)
Q Consensus 395 ~~~~~~~k~i~~~ 407 (414)
++.|++.|++..+
T Consensus 420 FdTFSH~k~~l~r 432 (477)
T KOG2456|consen 420 FDTFSHEKSCLLR 432 (477)
T ss_pred ccccccchhhhhc
Confidence 9999999999653
|
|
| >PRK11905 bifunctional proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.7e-77 Score=651.25 Aligned_cols=393 Identities=32% Similarity=0.489 Sum_probs=365.2
Q ss_pred CHHHHHHHHHhHHHHHHHHHHhcCCChHHHhhchHHHHHHHHHHHHHhhhhhcCcccccCCCcccceeecCCceEEEEcC
Q 015042 1 MWKFADLIEEHVEELAALDALDAGKVYLRAKTAEIPGAAEFLRFFAGAADKIHGEVLKMSSELQGYTLREPVGVVGHIIP 80 (414)
Q Consensus 1 L~~~a~~l~~~~~~l~~~~~~etGk~~~e~~~~ei~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p 80 (414)
|+++++.|++++++|+.++++|+||++.++ ..|+..+++.++|++..+++... ...++|+|||++|+|
T Consensus 618 L~raAdll~~~~~eL~~l~~~E~GKt~~ea-~~Ev~eaid~lr~ya~~a~~~~~-----------~~~~~P~GVv~~IsP 685 (1208)
T PRK11905 618 LERAADLMEAHMPELFALAVREAGKTLANA-IAEVREAVDFLRYYAAQARRLLN-----------GPGHKPLGPVVCISP 685 (1208)
T ss_pred HHHHHHHHHHhHHHHHHHHHHHhCCCHHHH-HHHHHHHHHHHHHHHHHHHHhcC-----------CceecCccEEEEEcC
Confidence 578999999999999999999999999975 56999999999999988765421 245789999999999
Q ss_pred CccchHHHHHhHHHHHhhCCeEEeecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhhHHHhhhCCCccEEEEeCCc
Q 015042 81 WNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLTALYYAHLAKLAGIPDGVLNVVPGFGPTAGAAICSHMDIDYVCFTGST 160 (414)
Q Consensus 81 ~n~P~~~~~~~~~~aLaaGN~vv~kps~~~~~~~~~l~~~l~~aG~p~g~v~~v~~~~~~~~~~l~~~~~v~~v~~tGs~ 160 (414)
||||+...++++++||++||+||+|||+.+|+++..+.++|.++|+|+|++|++++++.++++.|+.||+|+.|.||||+
T Consensus 686 wNfPlai~~g~i~aALaaGN~VV~KPse~tpl~a~~l~~ll~eAGlP~gvl~lV~G~g~~vg~~Lv~~p~v~~V~FTGSt 765 (1208)
T PRK11905 686 WNFPLAIFTGQIAAALVAGNTVLAKPAEQTPLIAARAVRLLHEAGVPKDALQLLPGDGRTVGAALVADPRIAGVMFTGST 765 (1208)
T ss_pred CcCHHHHHHHHHHHHHHcCCEEEEeCCcccHHHHHHHHHHHHHcCCCcccEEEeeCCchHHHHHHHcCCCcCEEEEeCCH
Confidence 99999999999999999999999999999999999999999999999999999999887799999999999999999999
Q ss_pred HHHHHHHHHHHhc--ccceeEEEcCCCCCceEcCCCCHHHHHHHHHHHhhccCCCCcccCceEEEeCchHHHHHHHHHHH
Q 015042 161 DVGRLVMQAAAAS--NLKQVSLELGGKSPLLIFDDADLDTAADVALLGNLYNKGEICVASSRVFVQEGIYDKFEKKLLEK 238 (414)
Q Consensus 161 ~~g~~i~~~~a~~--~~~~~~~e~gg~~~~iV~~dadl~~aa~~i~~~~~~~~Gq~C~a~~~i~V~~~i~d~f~~~l~~~ 238 (414)
.+|+.|.+.++.. +.+|+++|+|||||+||++|||++.|++.+++|+|.++||.|++++++|||++++|+|+++|++.
T Consensus 766 ~vg~~I~~~~A~~~~~~~pli~ElGGkN~~IV~~dAdle~Av~~iv~saF~~aGQ~CsA~~rl~V~~si~d~f~e~L~~~ 845 (1208)
T PRK11905 766 EVARLIQRTLAKRSGPPVPLIAETGGQNAMIVDSSALPEQVVADVIASAFDSAGQRCSALRVLCLQEDVADRVLTMLKGA 845 (1208)
T ss_pred HHHHHHHHHHHhhcCCCCeEEEecCCcCeEEEcCCCCHHHHHHHHHHHHHhcCCCccccCcEEEEehhHHHHHHHHHHHH
Confidence 9999999988732 24899999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhhcccCCCCCCCCcccccCCHHHHHHHHHHHHHHHHcCCEEEeCCcccC-CCCceeeeEEEeeCCCcccccccceecce
Q 015042 239 AKAWLVGDPFDPTVRQGPQISERHFDRILSYIEHGKREGATLLTGGKPIG-DKGYYIEPTIFTNVKEDMIIAKEEIFGPV 317 (414)
Q Consensus 239 ~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~-~~g~~~~Ptvl~~~~~~~~~~~~E~fgPv 317 (414)
++++++|+|.+.++++||++++.+++++.++|+++++.|+.++.++.... .+|+|+.|||+. + +++.++++|+||||
T Consensus 846 ~~~l~vGdP~d~~t~~GPvId~~a~~~i~~~I~~a~~~G~~l~~g~~~~~~~~G~fv~PTVl~-~-~~~~~~~eEiFGPV 923 (1208)
T PRK11905 846 MDELRIGDPWRLSTDVGPVIDAEAQANIEAHIEAMRAAGRLVHQLPLPAETEKGTFVAPTLIE-I-DSISDLEREVFGPV 923 (1208)
T ss_pred HHHhcCCCchhccCCccCccCHHHHHHHHHHHHHHHHCCCEEEEccCCCCCCCCeEEeeEEEe-c-CChHHhcCCccCce
Confidence 99999999999999999999999999999999999999998887764322 469999999996 3 57889999999999
Q ss_pred EEEEeeC--CHHHHHHHhhcCCCCceEEEecCCHHHHHHHHHhcceeEEEEcCcCC--CCCCCCcccCCCCCCC-ccchH
Q 015042 318 MALMKFK--TVEEAIKSANNTQYGLAAGIVTKDLNVANTVSRSIRAGIIWINCYFG--FSMDCPYGGYKMSGFG-REYGL 392 (414)
Q Consensus 318 l~v~~~~--~~~eai~~~n~~~~gl~~sv~s~d~~~~~~~~~~l~~g~v~iN~~~~--~~~~~p~gG~~~sG~g-~~~g~ 392 (414)
++|++|+ +++|+|+++|+++|||+++|||+|.+.++++++++++|+||||+... ..+.+||||+|.||+| +.+|+
T Consensus 924 L~V~~y~~~dldeaI~~iN~t~yGLt~~I~S~d~~~~~~~~~~l~aGnvyIN~~~~ga~vg~qPFGG~~~SG~G~kaGGp 1003 (1208)
T PRK11905 924 LHVVRFKADELDRVIDDINATGYGLTFGLHSRIDETIAHVTSRIRAGNIYVNRNIIGAVVGVQPFGGEGLSGTGPKAGGP 1003 (1208)
T ss_pred EEEEEeCCCCHHHHHHHHhcCCCCceEEEEcCCHHHHHHHHHhCCEeEEEECCCCCCCccCCCCCCCCCCCCCCCcCCCH
Confidence 9999997 69999999999999999999999999999999999999999998765 3356899999999999 59999
Q ss_pred HHHHhhheeeEEEee
Q 015042 393 ESLYKYLQIKSVVTP 407 (414)
Q Consensus 393 ~~~~~~~~~k~i~~~ 407 (414)
+++.+|++.|++..+
T Consensus 1004 ~~L~~f~~~k~v~~~ 1018 (1208)
T PRK11905 1004 LYLGRLVREAPTPIP 1018 (1208)
T ss_pred HHHHHHhhcceeecc
Confidence 999999999998765
|
|
| >cd07129 ALDH_KGSADH Alpha-Ketoglutaric Semialdehyde Dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.1e-76 Score=594.78 Aligned_cols=389 Identities=25% Similarity=0.309 Sum_probs=347.5
Q ss_pred CHHHHHHHHHhHHHHHHHHHHhcCCChHHHhhchHHHHHHHHHHHHHhhhhhc--Cccccc-------CCCcccceeecC
Q 015042 1 MWKFADLIEEHVEELAALDALDAGKVYLRAKTAEIPGAAEFLRFFAGAADKIH--GEVLKM-------SSELQGYTLREP 71 (414)
Q Consensus 1 L~~~a~~l~~~~~~l~~~~~~etGk~~~e~~~~ei~~~~~~l~~~a~~~~~~~--~~~~~~-------~~~~~~~~~~~P 71 (414)
|+++++.|++++++|++++++|+|||..+. ..|+..+++.+++++..+++.. +..... ..+...+.+++|
T Consensus 27 L~~~a~~l~~~~~ela~~~~~e~Gkp~~~~-~~ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P 105 (454)
T cd07129 27 LEAIADEIEALGDELVARAHAETGLPEARL-QGELGRTTGQLRLFADLVREGSWLDARIDPADPDRQPLPRPDLRRMLVP 105 (454)
T ss_pred HHHHHHHHHHhHHHHHHHHHHHcCCChHHH-HHHHHHHHHHHHHHHHHHHhcCCccccccccccccCCCCCccceEEeec
Confidence 578999999999999999999999999864 5799999999999998765421 111111 012345788999
Q ss_pred CceEEEEcCCccchHH--HHHhHHHHHhhCCeEEeecCCCChHHHHHHHHHH----HHcCCCCCcEEEEeCCchhhHHHh
Q 015042 72 VGVVGHIIPWNFPTTM--FFMKVSPALAAGCTMIVKPAEQTPLTALYYAHLA----KLAGIPDGVLNVVPGFGPTAGAAI 145 (414)
Q Consensus 72 ~Gvv~~i~p~n~P~~~--~~~~~~~aLaaGN~vv~kps~~~~~~~~~l~~~l----~~aG~p~g~v~~v~~~~~~~~~~l 145 (414)
+|||++|+|||||+.. .++++++||++||+||+|||+.+|.++.++.+++ .++|+|+|+++++++++.+.++.|
T Consensus 106 ~GvV~~I~p~N~P~~~~~~~~~~a~ALaaGN~VVlKps~~~p~t~~~l~~~~~~~l~~aGlP~gvv~~v~g~~~~~~~~L 185 (454)
T cd07129 106 LGPVAVFGASNFPLAFSVAGGDTASALAAGCPVVVKAHPAHPGTSELVARAIRAALRATGLPAGVFSLLQGGGREVGVAL 185 (454)
T ss_pred cceEEEECCCCCchhhhhhhhhHHHHHHcCCeEEEEcCCCCchHHHHHHHHHHHHHHHhCCChhheEEeeCCcHHHHHHH
Confidence 9999999999999988 4589999999999999999999999999988776 589999999999999776789999
Q ss_pred hhCCCccEEEEeCCcHHHHHHHHHHHhc--ccceeEEEcCCCCCceEcCCC---CHHHHHHHHHHHhhccCCCCcccCce
Q 015042 146 CSHMDIDYVCFTGSTDVGRLVMQAAAAS--NLKQVSLELGGKSPLLIFDDA---DLDTAADVALLGNLYNKGEICVASSR 220 (414)
Q Consensus 146 ~~~~~v~~v~~tGs~~~g~~i~~~~a~~--~~~~~~~e~gg~~~~iV~~da---dl~~aa~~i~~~~~~~~Gq~C~a~~~ 220 (414)
+.|++||.|.||||+.+|+.|.+.++ . +++|+++|+|||||+||++|+ |++.|++.+++++|.|+||.|++++|
T Consensus 186 ~~~~~v~~V~fTGs~~~G~~i~~~aa-~~~~~~p~~lElGG~n~~iV~~da~~~dl~~aa~~i~~~~~~~~GQ~C~a~~r 264 (454)
T cd07129 186 VKHPAIKAVGFTGSRRGGRALFDAAA-ARPEPIPFYAELGSVNPVFILPGALAERGEAIAQGFVGSLTLGAGQFCTNPGL 264 (454)
T ss_pred hcCCCccEEEEeCChHHHHHHHHHhh-ccCccceeEeecCCcCcEEEeCCcchHHHHHHHHHHHHHHhcCCCCeecCCce
Confidence 99999999999999999999999887 5 689999999999999999999 89999999999999999999999999
Q ss_pred EEEeCc-hHHHHHHHHHHHHhhcccCCCCCCCCcccccCCHHHHHHHHHHHHHHHHc-CCEEEeCCcccCCCCceeeeEE
Q 015042 221 VFVQEG-IYDKFEKKLLEKAKAWLVGDPFDPTVRQGPQISERHFDRILSYIEHGKRE-GATLLTGGKPIGDKGYYIEPTI 298 (414)
Q Consensus 221 i~V~~~-i~d~f~~~l~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~-ga~v~~gg~~~~~~g~~~~Ptv 298 (414)
||||++ ++|+|+++|.++++++++| |++++...++..+.+++++++ |+++++||... .+|+|++|||
T Consensus 265 v~v~~~~i~d~f~~~l~~~~~~~~~g----------~~~~~~~~~~~~~~i~~a~~~~ga~~l~gg~~~-~~g~~~~Ptv 333 (454)
T cd07129 265 VLVPAGPAGDAFIAALAEALAAAPAQ----------TMLTPGIAEAYRQGVEALAAAPGVRVLAGGAAA-EGGNQAAPTL 333 (454)
T ss_pred EEEeCcccHHHHHHHHHHHHhccCCC----------CCcChHHHHHHHHHHHHHHhcCCcEEEeCCCcC-CCCCccCCEE
Confidence 999999 9999999999999988654 666777777888888999888 99999999754 3689999999
Q ss_pred EeeCC---CcccccccceecceEEEEeeCCHHHHHHHhhcCCCCceEEEecCC--HHHHHHHHHhc--ceeEEEEcCcCC
Q 015042 299 FTNVK---EDMIIAKEEIFGPVMALMKFKTVEEAIKSANNTQYGLAAGIVTKD--LNVANTVSRSI--RAGIIWINCYFG 371 (414)
Q Consensus 299 l~~~~---~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~sv~s~d--~~~~~~~~~~l--~~g~v~iN~~~~ 371 (414)
+...+ ++|.+++||+||||++|++|+|.+|||+++|++++||++||||+| .+.+++++.+| ++|+|+||+++.
T Consensus 334 l~~~~~~~~~~~i~~~E~FGPv~~v~~~~~~~eai~~~n~~~~gL~a~vft~d~~~~~a~~~~~~l~~~~G~v~iN~~~~ 413 (454)
T cd07129 334 FKVDAAAFLADPALQEEVFGPASLVVRYDDAAELLAVAEALEGQLTATIHGEEDDLALARELLPVLERKAGRLLFNGWPT 413 (454)
T ss_pred EEccCCccccchhhcccCCCCeEEEEEeCCHHHHHHHHhcCCCCcEEEEEccCchHHHHHHHHHHHHhhCcEEEECCCCc
Confidence 98665 689999999999999999999999999999999999999999999 79999999999 699999998754
Q ss_pred CC---CCCCccc-CCCCCCCcc--chHHHHHhhheee
Q 015042 372 FS---MDCPYGG-YKMSGFGRE--YGLESLYKYLQIK 402 (414)
Q Consensus 372 ~~---~~~p~gG-~~~sG~g~~--~g~~~~~~~~~~k 402 (414)
.. +.+|||| +|.||.|++ +|++++++||++.
T Consensus 414 ~~~~~~~~pfgG~~k~sg~g~~~~~g~~~~~~~~~~~ 450 (454)
T cd07129 414 GVEVCPAMVHGGPYPATTDPRFTSVGTAAIERFLRPV 450 (454)
T ss_pred cccccCCCCCCCCcCCCCCCccccccHHHHHHhcccc
Confidence 32 4799999 999999998 7999999999973
|
Alpha-Ketoglutaric Semialdehyde (KGSA) Dehydrogenase (KGSADH, EC 1.2.1.26) catalyzes the NAD(P)+-dependent conversion of KGSA to alpha-ketoglutarate. This CD contains such sequences as those seen in Azospirillum brasilense, KGSADH-II (D-glucarate/D-galactarate-inducible) and KGSADH-III (hydroxy-L-proline-inducible). Both show similar high substrate specificity for KGSA and different coenzyme specificity; KGSADH-II is NAD+-dependent and KGSADH-III is NADP+-dependent. Also included in this CD is the NADP(+)-dependent aldehyde dehydrogenase from Vibrio harveyi which catalyzes the oxidation of long-chain aliphatic aldehydes to acids. |
| >cd07084 ALDH_KGSADH-like ALDH subfamily: NAD(P)+-dependent alpha-ketoglutaric semialdehyde dehydrogenases and plant delta(1)-pyrroline-5-carboxylate dehydrogenase, ALDH family 12-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-75 Score=587.54 Aligned_cols=389 Identities=23% Similarity=0.259 Sum_probs=347.9
Q ss_pred CHHHHHHHHHhHHHHHHHHHHhcCCChHHHhhchHHHHHHHHHHHHHhhhhh--cCcccc-cC--CCcccceeecCCceE
Q 015042 1 MWKFADLIEEHVEELAALDALDAGKVYLRAKTAEIPGAAEFLRFFAGAADKI--HGEVLK-MS--SELQGYTLREPVGVV 75 (414)
Q Consensus 1 L~~~a~~l~~~~~~l~~~~~~etGk~~~e~~~~ei~~~~~~l~~~a~~~~~~--~~~~~~-~~--~~~~~~~~~~P~Gvv 75 (414)
|+++++.|++|+++|++++++|+|||. +. ..|+..+++.+++++..+... .+.... .. .+...+.+++|+|||
T Consensus 27 L~~~a~~l~~~~~ela~~~~~e~Gk~~-~~-~~ev~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv 104 (442)
T cd07084 27 LARIIQRLAAKSYDIAAGAVLVTGKGW-MF-AENICGDQVQLRARAFVIYSYRIPHEPGNHLGQGLKQQSHGYRWPYGPV 104 (442)
T ss_pred HHHHHHHHHhhHHHHHHHHHHHcCCch-hh-hhhhcchHHHHHHHHHHHHhccccccccccCCCCccccceEEeecceeE
Confidence 578999999999999999999999999 44 469999999999998877543 111111 11 134578899999999
Q ss_pred EEEcCCccchHHHHHhHHHHHhhCCeEEeecCCCChHHHHHHHHHHHHcCC-CCCcEEEEeCCchhhHHHhhhCCCccEE
Q 015042 76 GHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLTALYYAHLAKLAGI-PDGVLNVVPGFGPTAGAAICSHMDIDYV 154 (414)
Q Consensus 76 ~~i~p~n~P~~~~~~~~~~aLaaGN~vv~kps~~~~~~~~~l~~~l~~aG~-p~g~v~~v~~~~~~~~~~l~~~~~v~~v 154 (414)
++|+|||||+...++++++||++||+||+|||+.+|.++..+.+++.++|+ |+++++++++++. .+..|+.||++|.|
T Consensus 105 ~~I~p~N~P~~~~~~~~~~AL~aGN~vvlKps~~~p~~~~~l~~~l~~ag~~P~g~~~~v~g~~~-~~~~l~~~~~v~~V 183 (442)
T cd07084 105 LVIGAFNFPLWIPLLQLAGALAMGNPVIVKPHTAVSIVMQIMVRLLHYAGLLPPEDVTLINGDGK-TMQALLLHPNPKMV 183 (442)
T ss_pred EEEcCCccHhHHHHHHHHHHHHcCCeEEEECCCCchHHHHHHHHHHHHhCCCCccceEEeeCCcH-HHHHHHcCCCCCEE
Confidence 999999999999999999999999999999999999999999999999998 9999999999665 88999999999999
Q ss_pred EEeCCcHHHHHHHHHHHhcccceeEEEcCCCCCceEcCCC-CHHHHHHHHHHHhhccCCCCcccCceEEEeCc-hHHHHH
Q 015042 155 CFTGSTDVGRLVMQAAAASNLKQVSLELGGKSPLLIFDDA-DLDTAADVALLGNLYNKGEICVASSRVFVQEG-IYDKFE 232 (414)
Q Consensus 155 ~~tGs~~~g~~i~~~~a~~~~~~~~~e~gg~~~~iV~~da-dl~~aa~~i~~~~~~~~Gq~C~a~~~i~V~~~-i~d~f~ 232 (414)
.||||..+|+.|++.++ . +|+++|+|||||+||++|| |++.+++.+++++|.|+||.|+++++||||++ ++|+|+
T Consensus 184 ~fTGs~~~g~~i~~~a~-~--~~v~lElgG~~~~iV~~dadd~~~a~~~i~~~~~~~~GQ~C~a~~rl~V~~~~i~~~f~ 260 (442)
T cd07084 184 LFTGSSRVAEKLALDAK-Q--ARIYLELAGFNWKVLGPDAQAVDYVAWQCVQDMTACSGQKCTAQSMLFVPENWSKTPLV 260 (442)
T ss_pred EEECCHHHHHHHHHhcc-C--CcEEEeccCcCcEEECCChhhHHHHHHHHHHHHhcccCCeecCCcEEEEeCCccHHHHH
Confidence 99999999999999875 3 8999999999999999999 69999999999999999999999999999999 999999
Q ss_pred HHHHHHHhhcccCCCCCCCCcccccCCHHHHHHHHHHHHHHHHc-CCEEEeCCcccC------CCCceeeeEEEeeCCCc
Q 015042 233 KKLLEKAKAWLVGDPFDPTVRQGPQISERHFDRILSYIEHGKRE-GATLLTGGKPIG------DKGYYIEPTIFTNVKED 305 (414)
Q Consensus 233 ~~l~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~-ga~v~~gg~~~~------~~g~~~~Ptvl~~~~~~ 305 (414)
++|++.++++++| ++.+||++++. +.++++++.++ |+++++||.... ..|+|++|||+.+++++
T Consensus 261 ~~l~~~~~~~~~g-----~~~~gpl~~~~----~~~~i~~a~~~gga~~~~gg~~~~~~~~~~~~g~~~~Ptvl~~~~~~ 331 (442)
T cd07084 261 EKLKALLARRKLE-----DLLLGPVQTFT----TLAMIAHMENLLGSVLLFSGKELKNHSIPSIYGACVASALFVPIDEI 331 (442)
T ss_pred HHHHHHHHhcccC-----ccccChhhhHH----HHHHHHHHHhcCCcEEEeCCcccccCCCCCcCCcccCCeEEEecCcc
Confidence 9999999999988 57899987654 55566777777 489999987532 24899999999999999
Q ss_pred c---cccccceecceEEEEeeCC--HHHHHHHhhcCCCCceEEEecCCHHHHHHHHHhc-ceeEEEEcCc-CC-CCCCCC
Q 015042 306 M---IIAKEEIFGPVMALMKFKT--VEEAIKSANNTQYGLAAGIVTKDLNVANTVSRSI-RAGIIWINCY-FG-FSMDCP 377 (414)
Q Consensus 306 ~---~~~~~E~fgPvl~v~~~~~--~~eai~~~n~~~~gl~~sv~s~d~~~~~~~~~~l-~~g~v~iN~~-~~-~~~~~p 377 (414)
| .+++||+||||++|++|+| .+||++++|+++|||++||||+|.+.++++++++ ++|+||||+. +. ..+..|
T Consensus 332 ~~~~~i~~eE~FGPvl~v~~~~~~~~~eai~~~n~~~~gL~~~v~t~d~~~~~~~~~~l~~~G~v~iN~~~~~~~~~~~~ 411 (442)
T cd07084 332 LKTYELVTEEIFGPFAIVVEYKKDQLALVLELLERMHGSLTAAIYSNDPIFLQELIGNLWVAGRTYAILRGRTGVAPNQN 411 (442)
T ss_pred cccchHHheeccCceEEEEEeCCccHHHHHHHHHhCCCCeeEEEEeCCHHHHHHHHHHHHhcCeEEECCCCCCCcccccc
Confidence 7 9999999999999999999 9999999999999999999999999999999999 9999999976 33 445678
Q ss_pred ccc-CCCCCCCccc-hHHHHHhhheeeEE
Q 015042 378 YGG-YKMSGFGREY-GLESLYKYLQIKSV 404 (414)
Q Consensus 378 ~gG-~~~sG~g~~~-g~~~~~~~~~~k~i 404 (414)
||| .|.||+|++. |.+++++||++..+
T Consensus 412 ~gG~~k~sG~g~~~~g~~~~~~~~~~~~~ 440 (442)
T cd07084 412 HGGGPAADPRGAGIGGPEAIKLVWRCHAE 440 (442)
T ss_pred CCCCCCCCCCCccccchHHhhheeeeeee
Confidence 876 8899999986 99999999998654
|
ALDH subfamily which includes the NAD(P)+-dependent, alpha-ketoglutaric semialdehyde dehydrogenases (KGSADH, EC 1.2.1.26); plant delta(1)-pyrroline-5-carboxylate dehydrogenase (P5CDH, EC=1.5.1.12 ), ALDH family 12; the N-terminal domain of the MaoC (monoamine oxidase C) dehydratase regulatory protein; and orthologs of MaoC, PaaZ and PaaN, which are putative ring-opening enzymes of the aerobic phenylacetic acid catabolic pathway. |
| >KOG2454 consensus Betaine aldehyde dehydrogenase [Energy production and conversion] | Back alignment and domain information |
|---|
Probab=100.00 E-value=5e-75 Score=536.83 Aligned_cols=405 Identities=30% Similarity=0.522 Sum_probs=374.7
Q ss_pred CHHHHHHHHHhHHHHHHHHHHhcCCChHHHhhchHHHHHHHHHHHHHhhhhhcCc-cccc---CCCcccceeecCCceEE
Q 015042 1 MWKFADLIEEHVEELAALDALDAGKVYLRAKTAEIPGAAEFLRFFAGAADKIHGE-VLKM---SSELQGYTLREPVGVVG 76 (414)
Q Consensus 1 L~~~a~~l~~~~~~l~~~~~~etGk~~~e~~~~ei~~~~~~l~~~a~~~~~~~~~-~~~~---~~~~~~~~~~~P~Gvv~ 76 (414)
|+.+.++|.+|+|.+++..++||||+..++..+||..+++.+.+.....++.... ..+. ..-+..+++++|+||+.
T Consensus 114 L~~L~~yIi~nQdliaevacrDtGKTmvDAs~GEIlvTlEKI~Wtl~~Ger~L~P~~Rpn~~~~~yKg~~v~yePLGVI~ 193 (583)
T KOG2454|consen 114 LRILLKYIIENQDLIAEVACRDTGKTMVDASLGEILVTLEKITWTLSEGERWLKPESRPNGRAMLYKGSRVEYEPLGVIG 193 (583)
T ss_pred HHHHHHHHhhchhheeeeeecccCchhhhhhHhHHHHHHHHhhhhhhcchhhcCCcCCCchhheeeccceEEEeecceEE
Confidence 4567889999999999999999999999999999999999999887766543222 1111 12356789999999999
Q ss_pred EEcCCccchHHHHHhHHHHHhhCCeEEeecCCCChHHHHHHHH----HHHHcCCCCCcEEEEeCCchhhHHHhhhCCCcc
Q 015042 77 HIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLTALYYAH----LAKLAGIPDGVLNVVPGFGPTAGAAICSHMDID 152 (414)
Q Consensus 77 ~i~p~n~P~~~~~~~~~~aLaaGN~vv~kps~~~~~~~~~l~~----~l~~aG~p~g~v~~v~~~~~~~~~~l~~~~~v~ 152 (414)
.|.|||||+.+.+.+++.||.+||++|+|-|+.+.++.....+ +|+..|-|+++++++.+ =++.++.|.+|++++
T Consensus 194 aiVsWNYPfHN~lgPiiaAlFsGNaIVvK~SE~~~WS~~fy~e~ir~~L~a~g~~p~LVq~itc-lpd~a~~ltSh~g~k 272 (583)
T KOG2454|consen 194 AIVSWNYPFHNILGPIIAALFSGNAIVVKVSEHASWSGCFYFEIIRAALAAVGAPPNLVQVITC-LPDTAEALTSHSGVK 272 (583)
T ss_pred EeeecCCchhhhhhHHHHHHhcCCeEEEEeecceeeehhhHHHHHHHHHHHcCCCcchhheeec-CcchHhHhhcCCCcc
Confidence 9999999999999999999999999999999999988765544 46777999999999998 447899999999999
Q ss_pred EEEEeCCcHHHHHHHHHHHhcccceeEEEcCCCCCceEcCCCCHHHHHHHHHHHhhccCCCCcccCceEEEeCchHHHHH
Q 015042 153 YVCFTGSTDVGRLVMQAAAASNLKQVSLELGGKSPLLIFDDADLDTAADVALLGNLYNKGEICVASSRVFVQEGIYDKFE 232 (414)
Q Consensus 153 ~v~~tGs~~~g~~i~~~~a~~~~~~~~~e~gg~~~~iV~~dadl~~aa~~i~~~~~~~~Gq~C~a~~~i~V~~~i~d~f~ 232 (414)
++.|.||..+++.|++.++ +.++|+++|+|||+++||++|+|++..+.-++++.|..+||.|.+.+|++||+++||.|+
T Consensus 273 hitFiGSqpvak~i~~~AA-k~LTPv~lELGGKDafIi~dda~l~~v~si~mRGtfQSsGQNCiGiER~iv~k~~Yd~~i 351 (583)
T KOG2454|consen 273 HITFIGSQPVAKMIMRNAA-KTLTPVTLELGGKDAFIICDDADLSHVASIAMRGTFQSSGQNCIGIERFIVHKDIYDAFI 351 (583)
T ss_pred eEEEecCcHHHHHHHHhhh-hhcCcEEEeecCcccEEEeccccHHHHHHHHHhhhhhhcCCcccceeEEEEecchHHHHH
Confidence 9999999999999999998 999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhhcccCCCCCCCCcccccCCHHHHHHHHHHHHHHHHcCCEEEeCCcccC----CCCceeeeEEEeeCCCcccc
Q 015042 233 KKLLEKAKAWLVGDPFDPTVRQGPQISERHFDRILSYIEHGKREGATLLTGGKPIG----DKGYYIEPTIFTNVKEDMII 308 (414)
Q Consensus 233 ~~l~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~----~~g~~~~Ptvl~~~~~~~~~ 308 (414)
..|..+++.++.|.|...+.+||.|++..+++.+++++++|+++|+++++||.+-. ..|.|++||++.+++++|.|
T Consensus 352 ~~l~~rv~s~r~G~~~~~~vDMGAm~s~nrfdhLesLv~DAv~KGArl~~gGsrF~Hpkyp~g~YF~PTlLvdvt~eMKI 431 (583)
T KOG2454|consen 352 GQLTKRVKSVRAGPPLTGRVDMGAMCSQNRFDHLESLVNDAVDKGARLAVGGSRFGHPKYPVGQYFPPTLLVDVTHEMKI 431 (583)
T ss_pred HHHHHHHHHHHcCCCccCccchhhhhhccchHHHHHHHHHHHhhcchhhhcccccCCCCCCcccccCCeEEEecCchhhh
Confidence 99999999999999999999999999999999999999999999999999998642 36999999999999999999
Q ss_pred cccceecceEEEEeeCCHHHHHHHhhcCCCCceEEEecCCHHHHHHHHHhcceeEEEEcCcCC-CCCCCCcccCCCCCCC
Q 015042 309 AKEEIFGPVMALMKFKTVEEAIKSANNTQYGLAAGIVTKDLNVANTVSRSIRAGIIWINCYFG-FSMDCPYGGYKMSGFG 387 (414)
Q Consensus 309 ~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~sv~s~d~~~~~~~~~~l~~g~v~iN~~~~-~~~~~p~gG~~~sG~g 387 (414)
++||.||||++++++++.|++++++|++++||.+|||+.|..++++++++|++|.|.||+... +.-++||||+|.||+|
T Consensus 432 aqeE~FgPI~~im~ak~~eh~i~lAN~s~fgLG~sVFg~dk~~c~y~a~~lqtG~vAiNDFasfY~cQlPFGG~k~SGyG 511 (583)
T KOG2454|consen 432 AQEEAFGPIMPIMQAKTDEHVIKLANDSRFGLGCSVFGGDKHRCKYIASQLQTGVVAINDFASFYMCQLPFGGVKDSGYG 511 (583)
T ss_pred HhhhccccchhhhhcCChHHHHhhccCCcccccceeccccHHHHHHHHhhhhccceeehhhhhhheeccccCCccCCCcc
Confidence 999999999999999999999999999999999999999999999999999999999999977 4467999999999999
Q ss_pred ccchHHHHHhhheeeEEEee
Q 015042 388 REYGLESLYKYLQIKSVVTP 407 (414)
Q Consensus 388 ~~~g~~~~~~~~~~k~i~~~ 407 (414)
++.|.+|++..+..|+|.++
T Consensus 512 rFaG~EGLrg~Cn~Ksv~yd 531 (583)
T KOG2454|consen 512 RFAGIEGLRGCCNVKSVAYD 531 (583)
T ss_pred ccccHHHHHHHhcccceecc
Confidence 99999999999999999655
|
|
| >cd07121 ALDH_EutE Ethanolamine utilization protein EutE-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=9e-74 Score=571.49 Aligned_cols=372 Identities=19% Similarity=0.249 Sum_probs=319.5
Q ss_pred CHHHHHHHHHhHHHHHHHHHHhcCCChHHHhhchHHHHHHHHHHHHHhhhhhc--CcccccCCCcccceeecCCceEEEE
Q 015042 1 MWKFADLIEEHVEELAALDALDAGKVYLRAKTAEIPGAAEFLRFFAGAADKIH--GEVLKMSSELQGYTLREPVGVVGHI 78 (414)
Q Consensus 1 L~~~a~~l~~~~~~l~~~~~~etGk~~~e~~~~ei~~~~~~l~~~a~~~~~~~--~~~~~~~~~~~~~~~~~P~Gvv~~i 78 (414)
|+++++.|++|.++|++++++|+|||..++. ++.++++++...... ........+...+++++|+|||++|
T Consensus 32 L~~~a~~l~~~~~ela~~~~~E~Gk~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~PlGVV~~I 104 (429)
T cd07121 32 IEAIREALLSNAEELAEMAVEETGMGRVEDK-------IAKNHLAAEKTPGTEDLTTTAWSGDNGLTLVEYAPFGVIGAI 104 (429)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHCCCHHHHH-------HHHHHHHHHhcCcccccccccccCCCcceEEEEcccceEEEE
Confidence 5789999999999999999999999987642 334555544221110 0000001123457889999999999
Q ss_pred cCCccchHHHHHhHHHHHhhCCeEEeecCCCChHHHHHHHHHH----HHcCCCCCcEEEEeCCchhhHHHhhhCCCccEE
Q 015042 79 IPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLTALYYAHLA----KLAGIPDGVLNVVPGFGPTAGAAICSHMDIDYV 154 (414)
Q Consensus 79 ~p~n~P~~~~~~~~~~aLaaGN~vv~kps~~~~~~~~~l~~~l----~~aG~p~g~v~~v~~~~~~~~~~l~~~~~v~~v 154 (414)
+|||||+..+++++++||++||+||+|||+.+|.++..+.+++ .++|+|+|++|++++++.+.++.|+.||+||+|
T Consensus 105 ~PwN~P~~~~~~~~~~ALaaGN~VVlKpse~tp~t~~~l~~l~~~~~~~aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~I 184 (429)
T cd07121 105 TPSTNPTETIINNSISMLAAGNAVVFNPHPGAKKVSAYAVELINKAIAEAGGPDNLVVTVEEPTIETTNELMAHPDINLL 184 (429)
T ss_pred ccCCCchhHHHHHHHHHHHcCCCEEEECCccchhHHHHHHHHHHHHHHHcCCCcceEEEecCCChHHHHHHHcCCCccEE
Confidence 9999999999999999999999999999999999999998877 578999999999998777789999999999999
Q ss_pred EEeCCcHHHHHHHHHHHhcccceeEEEcCCCCCceEcCCCCHHHHHHHHHHHhhccCCCCcccCceEEEeCchHHHHHHH
Q 015042 155 CFTGSTDVGRLVMQAAAASNLKQVSLELGGKSPLLIFDDADLDTAADVALLGNLYNKGEICVASSRVFVQEGIYDKFEKK 234 (414)
Q Consensus 155 ~~tGs~~~g~~i~~~~a~~~~~~~~~e~gg~~~~iV~~dadl~~aa~~i~~~~~~~~Gq~C~a~~~i~V~~~i~d~f~~~ 234 (414)
.||||+.+|+.|++. .+|+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++
T Consensus 185 ~fTGs~~~g~~v~~~-----~k~~~lelGGk~p~iV~~dADld~Aa~~i~~~~~~n~GQ~C~a~~rv~V~~~i~d~f~~~ 259 (429)
T cd07121 185 VVTGGPAVVKAALSS-----GKKAIGAGAGNPPVVVDETADIEKAARDIVQGASFDNNLPCIAEKEVIAVDSVADYLIAA 259 (429)
T ss_pred EeeCCHHHHHHHHhC-----CCceEeecCCCceEEEecCCCHHHHHHHHHhcccccCCCCCCccceEEEeHHHHHHHHHH
Confidence 999999999999864 489999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhhcccCCCCCCCCcccccCCHHHHHHHHHHHHHHHHc--CCEEEeCCccc---CCCCceee---eEEEeeCCCcc
Q 015042 235 LLEKAKAWLVGDPFDPTVRQGPQISERHFDRILSYIEHGKRE--GATLLTGGKPI---GDKGYYIE---PTIFTNVKEDM 306 (414)
Q Consensus 235 l~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~--ga~v~~gg~~~---~~~g~~~~---Ptvl~~~~~~~ 306 (414)
|++. + .++++.++.+++.++++++.+. |+++++||... ...|.|+. |||+.+++++|
T Consensus 260 L~~~------~---------~~~i~~~~~~~v~~~i~~a~~~~~ga~~~~gg~~~~~~~~~G~~~~~~~ptil~~v~~~~ 324 (429)
T cd07121 260 MQRN------G---------AYVLNDEQAEQLLEVVLLTNKGATPNKKWVGKDASKILKAAGIEVPADIRLIIVETDKDH 324 (429)
T ss_pred HHHC------C---------CEEcCHHHHHHHHHhhcccCCCccccccccCcCHHHHHHHcCCCCCCCCeEEEEecCCCC
Confidence 9885 1 1478999999999999999864 68999988541 12477877 59999999999
Q ss_pred cccccceecceEEEEeeCCHHHHHHHhhcCCCCc--eEEEecCCHHHHHHHHHhcceeEEEEcCcCCCCCCCCcccCCCC
Q 015042 307 IIAKEEIFGPVMALMKFKTVEEAIKSANNTQYGL--AAGIVTKDLNVANTVSRSIRAGIIWINCYFGFSMDCPYGGYKMS 384 (414)
Q Consensus 307 ~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl--~~sv~s~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~p~gG~~~s 384 (414)
++++||+||||++|++|+|+||||+++|+++||| +++|||+|.+.++++++++++|.||||++.. +.+||||+|.|
T Consensus 325 ~i~~eE~FgPVl~v~~~~~~~eAi~~an~~~~GLghsa~I~t~d~~~a~~~a~~l~aG~v~iN~~~~--~~~p~gG~k~s 402 (429)
T cd07121 325 PFVVEEQMMPILPVVRVKNFDEAIELAVELEHGNRHTAIIHSKNVENLTKMARAMQTTIFVKNGPSY--AGLGVGGEGYT 402 (429)
T ss_pred CccccccccceEEEEEeCCHHHHHHHHHhhccCCCceEEEecCCHHHHHHHHhhCCceEEEEcCCCc--CccccCCCccc
Confidence 9999999999999999999999999999999999 9999999999999999999999999998754 67899999999
Q ss_pred CC--CccchHHHHHhhheeeEEE
Q 015042 385 GF--GREYGLESLYKYLQIKSVV 405 (414)
Q Consensus 385 G~--g~~~g~~~~~~~~~~k~i~ 405 (414)
++ |..-| +| .+.+|+++
T Consensus 403 ~~~~~~~~~-~~---~~~~~~~~ 421 (429)
T cd07121 403 TFTIAGPTG-EG---LTSARTFT 421 (429)
T ss_pred eEEecCCcC-cC---ccChhhhh
Confidence 98 53333 33 35555554
|
Coenzyme A acylating aldehyde dehydrogenase (ACDH), an NAD+ and CoA-dependent acetaldehyde dehydrogenase, acetylating (EC=1.2.1.10), converts acetaldehyde into acetyl-CoA. This CD is limited to such monofunctional enzymes as the Ethanolamine utilization protein, EutE, in Salmonella typhimurium. Mutations in eutE abolish the ability to utilize ethanolamine as a carbon source. |
| >TIGR02288 PaaN_2 phenylacetic acid degradation protein paaN | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.6e-72 Score=570.70 Aligned_cols=386 Identities=19% Similarity=0.234 Sum_probs=328.7
Q ss_pred CHHHHHHHHHhHHHHHHHHHHhcCCChHHHhh----chHHHHHHHHHHHHHhhhhhcCccc---ccC-CCc---ccceee
Q 015042 1 MWKFADLIEEHVEELAALDALDAGKVYLRAKT----AEIPGAAEFLRFFAGAADKIHGEVL---KMS-SEL---QGYTLR 69 (414)
Q Consensus 1 L~~~a~~l~~~~~~l~~~~~~etGk~~~e~~~----~ei~~~~~~l~~~a~~~~~~~~~~~---~~~-~~~---~~~~~~ 69 (414)
|+++++.|++|+++|++++++|+|||..++.. .++.+.++.+++++....++.+... +.. ... ..+.++
T Consensus 112 L~~~a~~l~~~~~elA~~~~~etGk~~~~a~e~gkp~~~~r~i~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~ 191 (551)
T TIGR02288 112 CLEILQRLNARSFEIAHAVMHTTGQAFMMAFQAGGPHAQDRGLEAVAYAYREMSRIPETAVWEKPQGKNDPLKLKKRFTI 191 (551)
T ss_pred HHHHHHHHHHCHHHHHHHHHHHhCCCHHHHHhccChHHHHHHHHHHHHHHHHHHhccCcccccccCCCCCcccccceEEE
Confidence 57899999999999999999999999987532 1778889999999988776655433 111 111 123478
Q ss_pred cCCceEEEEcCCccchHHHHHhHHHHHhhCCeEEeecCCCChHHHH----HHHHHHHHcCCCCCcEEEEeCC-chhhHHH
Q 015042 70 EPVGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLTAL----YYAHLAKLAGIPDGVLNVVPGF-GPTAGAA 144 (414)
Q Consensus 70 ~P~Gvv~~i~p~n~P~~~~~~~~~~aLaaGN~vv~kps~~~~~~~~----~l~~~l~~aG~p~g~v~~v~~~-~~~~~~~ 144 (414)
+|+|||++|+|||||+++.++++++||++||+||+|||+.+|+++. .+.++|.++|+|+|+||++++. +.++++.
T Consensus 192 ~P~GVv~vI~PwNfP~~~~~~~l~~ALaaGN~VVlKPs~~tpl~~~~~~~~l~e~l~eAGlP~gvv~lv~g~~g~~~~~~ 271 (551)
T TIGR02288 192 VPRGIALVIGCSTFPTWNTYPGLFASLATGNPVLVKPHPGAILPLALTVQVAREVLGEAGFDPNLVTLAAFDPGHEAAQR 271 (551)
T ss_pred EecCeEEEEcCcccHHHHHHHHHHHHHHcCCeEEEECCcccchhHHHHHHHHHHHHHHcCcChhHEEEecCCCcHHHHHH
Confidence 9999999999999999999999999999999999999999998655 6679999999999999999985 6778999
Q ss_pred hhhCCCccEEEEeCCcHHHHHHHHHHHhcccceeEEEcCCCCCceEcCCCCHHHHHHHHHHHhhccCCCCcccCceEEEe
Q 015042 145 ICSHMDIDYVCFTGSTDVGRLVMQAAAASNLKQVSLELGGKSPLLIFDDADLDTAADVALLGNLYNKGEICVASSRVFVQ 224 (414)
Q Consensus 145 l~~~~~v~~v~~tGs~~~g~~i~~~~a~~~~~~~~~e~gg~~~~iV~~dadl~~aa~~i~~~~~~~~Gq~C~a~~~i~V~ 224 (414)
|+.||+|+.|.||||+.+|+.|.+.++ .+++++|+|||||+||++|+|++.+++.+++++|.|+||.|++++|||||
T Consensus 272 L~~~p~v~~I~FTGSt~~G~~I~~~aa---~~~v~lElGGknp~IV~~dADld~aa~~i~~~~f~~sGQ~Cta~~ri~V~ 348 (551)
T TIGR02288 272 LATDPAVRIIDFTGSNAFGQWLEQNAR---QAQVYTEKAGVNTVIIESTDDYKAMLRNLAFSLSLYSGQMCTTTQAILVP 348 (551)
T ss_pred HHhCCCccEEEEECCHHHHHHHHHhcc---cCcEEeecCCcCeEEEcCCCCHHHHHHHHHHHHHhhCCCCCCCCCEEEEe
Confidence 999999999999999999999998765 47999999999999999999999999999999999999999999999999
Q ss_pred Cc---------hHHHHHHHHHHHHhhcccCCCCCCCCcccccCCHHHHHHHHHHHHHHHHcCCEEEeCCcccC---CCC-
Q 015042 225 EG---------IYDKFEKKLLEKAKAWLVGDPFDPTVRQGPQISERHFDRILSYIEHGKREGATLLTGGKPIG---DKG- 291 (414)
Q Consensus 225 ~~---------i~d~f~~~l~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~---~~g- 291 (414)
++ +||+|+++|+++++++ +|+|.++.+++||+++..+++++ +++++.| ++++||.... ..|
T Consensus 349 ~~~i~~~~g~~i~def~~~L~~~~~~l-vGdp~~~~~~~Gplis~~~~~ri----~~a~~~G-~v~~gG~~~~~~~~~g~ 422 (551)
T TIGR02288 349 RDGIRTDQGRKSYDEVAADLATAIDGL-LGDPARATAVLGAIQSPDTLARI----AEARALG-EVLLASTKIEHPEFPGA 422 (551)
T ss_pred ccccccccchhHHHHHHHHHHHHHHHh-cCCcccccccccCcCCHHHHHHH----HHHHhCC-CEEEcCccCCCCCCCCC
Confidence 99 7999999999999999 99999999999999999999985 5566777 5666665421 134
Q ss_pred ceeeeEEEeeCCCcccccccceecceEEEEeeCCHHHHHHHhhcC--CCC-ceEEEecCCHHHHHHHHHhc---------
Q 015042 292 YYIEPTIFTNVKEDMIIAKEEIFGPVMALMKFKTVEEAIKSANNT--QYG-LAAGIVTKDLNVANTVSRSI--------- 359 (414)
Q Consensus 292 ~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~--~~g-l~~sv~s~d~~~~~~~~~~l--------- 359 (414)
+|++|||+...+++|.+++||+||||++|++|+|.||||+++|++ +|| |++||||+|.+.++++.+++
T Consensus 423 ~~~~Ptvl~~~~~d~~i~~eE~FGPVl~V~~~~d~deAi~~aN~~~~~~G~Lta~VfT~d~~~~~~~~~~~~~~~~~l~i 502 (551)
T TIGR02288 423 RVRTPLLLKCDAADEAAYMQERFGPIAFVVAVDDGAHAVELARRSVREKGAMTVGAYTTDPEVVDAVQEAAWDAAVALSL 502 (551)
T ss_pred EEeccEEEEcCCCCCHHHhCCCcCCEEEEEEECCHHHHHHHHhcCCCCCCCceEEEEeCCHHHHHHHHHHHHHhccCeee
Confidence 688999995444599999999999999999999999999999998 566 99999999999999999999
Q ss_pred -ceeEEEEcCcCCCCCCCCcccCCCCCCCc-cchHHHHHhhhee
Q 015042 360 -RAGIIWINCYFGFSMDCPYGGYKMSGFGR-EYGLESLYKYLQI 401 (414)
Q Consensus 360 -~~g~v~iN~~~~~~~~~p~gG~~~sG~g~-~~g~~~~~~~~~~ 401 (414)
++|.|+||++ .||++.+.||.+. .+..+.-..|...
T Consensus 503 N~~G~v~vN~~------~~~~~~~~sg~n~~a~~~~~~~~~~~~ 540 (551)
T TIGR02288 503 NLTGGVFVNQS------AAFSDFHGTGGNPAANASLSDGAFVAN 540 (551)
T ss_pred cCCceEEEccC------CCCCCCCCCCCCCccCCcccchhhhhc
Confidence 6666666664 5666777777663 3334444444443
|
This family includes sequences from Burkholderia, Bordetella, Streptomyces. Other PaaN enzymes are represented by a separate model, TIGR02278. |
| >PRK15398 aldehyde dehydrogenase EutE; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.9e-73 Score=568.30 Aligned_cols=376 Identities=18% Similarity=0.232 Sum_probs=322.4
Q ss_pred CHHHHHHHHHhHHHHHHHHHHhcCCChHHHhhchHHHHHHHHHHHHHhhhh---hcCcccccCCCcccceeecCCceEEE
Q 015042 1 MWKFADLIEEHVEELAALDALDAGKVYLRAKTAEIPGAAEFLRFFAGAADK---IHGEVLKMSSELQGYTLREPVGVVGH 77 (414)
Q Consensus 1 L~~~a~~l~~~~~~l~~~~~~etGk~~~e~~~~ei~~~~~~l~~~a~~~~~---~~~~~~~~~~~~~~~~~~~P~Gvv~~ 77 (414)
|+++++.|++|+++|+++++.|+||+..++.. ..+++++..... ....... ..+...+++++|+|||++
T Consensus 64 L~~la~~l~~~~~ela~~~~~E~Gk~~~ea~~-------~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~v~~~P~GVV~~ 135 (465)
T PRK15398 64 IDAIREALLPHAEELAELAVEETGMGRVEDKI-------AKNVAAAEKTPGVEDLTTEALT-GDNGLTLIEYAPFGVIGA 135 (465)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHCCCcHHHHH-------HHHHHHHHHhccccccccCccc-CCCceeEEEecccEEEEE
Confidence 57899999999999999999999999987542 223444333211 1111111 122346788899999999
Q ss_pred EcCCccchHHHHHhHHHHHhhCCeEEeecCCCChHHHHHHHHHHH----HcCCCCCcEEEEeCCchhhHHHhhhCCCccE
Q 015042 78 IIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLTALYYAHLAK----LAGIPDGVLNVVPGFGPTAGAAICSHMDIDY 153 (414)
Q Consensus 78 i~p~n~P~~~~~~~~~~aLaaGN~vv~kps~~~~~~~~~l~~~l~----~aG~p~g~v~~v~~~~~~~~~~l~~~~~v~~ 153 (414)
|+|||||+..+++++++||++||+||+|||+.+|.++..+.+++. ++|+|+|+++++++.+.+.++.|++||+||+
T Consensus 136 I~PwN~P~~~~~~~ia~ALaaGN~VVlKps~~tp~t~~~l~~ll~~~l~eaGlP~gvv~vv~g~~~~~~~~L~~~~~vd~ 215 (465)
T PRK15398 136 VTPSTNPTETIINNAISMLAAGNSVVFSPHPGAKKVSLRAIELLNEAIVAAGGPENLVVTVAEPTIETAQRLMKHPGIAL 215 (465)
T ss_pred eeCCCCchHHHHHHHHHHHHhCCcEEEECCccchHHHHHHHHHHHHHHHHcCCCCCeEEEecCCCHHHHHHHHcCCCccE
Confidence 999999999999999999999999999999999999999998865 6899999999999867778899999999999
Q ss_pred EEEeCCcHHHHHHHHHHHhcccceeEEEcCCCCCceEcCCCCHHHHHHHHHHHhhccCCCCcccCceEEEeCchHHHHHH
Q 015042 154 VCFTGSTDVGRLVMQAAAASNLKQVSLELGGKSPLLIFDDADLDTAADVALLGNLYNKGEICVASSRVFVQEGIYDKFEK 233 (414)
Q Consensus 154 v~~tGs~~~g~~i~~~~a~~~~~~~~~e~gg~~~~iV~~dadl~~aa~~i~~~~~~~~Gq~C~a~~~i~V~~~i~d~f~~ 233 (414)
|.||||+.+|+.|++ ..+|+++|+|||||+||++|||++.|++.+++++|.|+||.|+++++||||+++||+|++
T Consensus 216 I~fTGS~~~G~~v~~-----~~k~~~~elGGk~p~IV~~dADld~Aa~~i~~g~~~n~GQ~C~A~~rvlV~~si~d~f~~ 290 (465)
T PRK15398 216 LVVTGGPAVVKAAMK-----SGKKAIGAGAGNPPVVVDETADIEKAARDIVKGASFDNNLPCIAEKEVIVVDSVADELMR 290 (465)
T ss_pred EEeeCCHHHHHHHHH-----cCCceeeecCCCceEEEecCCCHHHHHHHHHHhcccCCCCcCCCCceEEEeHHHHHHHHH
Confidence 999999999999987 248999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhhcccCCCCCCCCcccccCCHHHHHHHHHHHHHHHHcCCEEEeCCccc---CCCCcee---eeEEEeeCCCccc
Q 015042 234 KLLEKAKAWLVGDPFDPTVRQGPQISERHFDRILSYIEHGKREGATLLTGGKPI---GDKGYYI---EPTIFTNVKEDMI 307 (414)
Q Consensus 234 ~l~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ga~v~~gg~~~---~~~g~~~---~Ptvl~~~~~~~~ 307 (414)
+|++.. +|+++..+++++.++++++.+.+++++.||... ...|.++ .|||+.+++++|+
T Consensus 291 ~l~~~~---------------~~li~~~~~~~v~~~l~~~~~~~~~~~~g~~~~~i~~~~G~~~~~~~~tvl~~v~~d~~ 355 (465)
T PRK15398 291 LMEKNG---------------AVLLTAEQAEKLQKVVLKNGGTVNKKWVGKDAAKILEAAGINVPKDTRLLIVETDANHP 355 (465)
T ss_pred HHHHcC---------------CccCCHHHHHHHHHHHhhcccccchhhhCCCHHHHHHhCCCCCCCCCCEEEecCCCCCc
Confidence 998851 278999999999999996554455777775421 1246655 4899999999999
Q ss_pred ccccceecceEEEEeeCCHHHHHHHhhcCCCCc--eEEEecCCHHHHHHHHHhcceeEEEEcCcCCCCCCCCcccCCCCC
Q 015042 308 IAKEEIFGPVMALMKFKTVEEAIKSANNTQYGL--AAGIVTKDLNVANTVSRSIRAGIIWINCYFGFSMDCPYGGYKMSG 385 (414)
Q Consensus 308 ~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl--~~sv~s~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~p~gG~~~sG 385 (414)
+++||+||||++|++|+|+|||++++|+++||| ++||||+|.+.++++++++++|+|+||++.. +.+||||.|.|.
T Consensus 356 i~~eE~FGPVl~V~~~~d~deAi~~aN~~~yGL~hs~~IfT~d~~~a~~~a~~l~~G~V~iN~~~~--~~~p~gg~~~s~ 433 (465)
T PRK15398 356 FVVTELMMPVLPVVRVKDVDEAIALAVKLEHGNRHTAIMHSRNVDNLNKMARAIQTSIFVKNGPSY--AGLGLGGEGFTT 433 (465)
T ss_pred hhcccccCceEEEEEeCCHHHHHHHHHhcccCCcceEEEecCCHHHHHHHHHhCCceEEEECCCCc--cccCcCCCCCce
Confidence 999999999999999999999999999999998 9999999999999999999999999998753 679999999998
Q ss_pred CCccchHHHHHhhheeeEEEeeC
Q 015042 386 FGREYGLESLYKYLQIKSVVTPI 408 (414)
Q Consensus 386 ~g~~~g~~~~~~~~~~k~i~~~~ 408 (414)
+- .+|+.| ...|..|+++.+.
T Consensus 434 ~~-~~~~~g-~~~~~~~~~~~~~ 454 (465)
T PRK15398 434 FT-IATPTG-EGVTSARTFTRRR 454 (465)
T ss_pred ee-ecccCC-CCccchhhhhhhe
Confidence 63 237777 7888888776543
|
|
| >cd07081 ALDH_F20_ACDH_EutE-like Coenzyme A acylating aldehyde dehydrogenase (ACDH), Ethanolamine utilization protein EutE, and related proteins | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.8e-72 Score=557.87 Aligned_cols=382 Identities=17% Similarity=0.221 Sum_probs=321.1
Q ss_pred CHHHHHHHHHhHHHHHHHHHHhcCCChHHHhhchHHHHHH--HHHHHHHhhhhhcCcccccCCCcccceeecCCceEEEE
Q 015042 1 MWKFADLIEEHVEELAALDALDAGKVYLRAKTAEIPGAAE--FLRFFAGAADKIHGEVLKMSSELQGYTLREPVGVVGHI 78 (414)
Q Consensus 1 L~~~a~~l~~~~~~l~~~~~~etGk~~~e~~~~ei~~~~~--~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i 78 (414)
|+++++.|++|+++|++++++|+|||..++.. ++...+. ..++++. ...++.++.+.+...+.+++|+|||++|
T Consensus 27 L~~~a~~l~~~~~ela~~~~~E~Gk~~~ea~~-~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~P~GVV~~I 102 (439)
T cd07081 27 FRAAAEAAEDARIDLAKLAVSETGMGRVEDKV-IKNHFAAEYIYNVYKD---EKTCGVLTGDENGGTLIIAEPIGVVASI 102 (439)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCChHHHHH-HHHHHHHHHHHHHHhc---cccCceecCCCCCceEEEEecceEEEEE
Confidence 57899999999999999999999999987643 5544443 2233322 1222222322234568899999999999
Q ss_pred cCCccchHHHHHhHHHHHhhCCeEEeecCCCChHHHHHHHHHHH----HcCCCCCcEEEEeCCchhhHHHhhhCCCccEE
Q 015042 79 IPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLTALYYAHLAK----LAGIPDGVLNVVPGFGPTAGAAICSHMDIDYV 154 (414)
Q Consensus 79 ~p~n~P~~~~~~~~~~aLaaGN~vv~kps~~~~~~~~~l~~~l~----~aG~p~g~v~~v~~~~~~~~~~l~~~~~v~~v 154 (414)
+|||||+...++++++||++||+||+|||+.+|.++..+.+++. ++|+|+|+||++++.+.+.++.|+.||+|++|
T Consensus 103 ~PwN~P~~~~~~~~~~ALaaGN~VVlKPs~~tp~~~~~l~~l~~~~l~~aG~P~gvv~~v~g~~~~~g~~L~~~~~V~~V 182 (439)
T cd07081 103 TPSTNPTSTVIFKSLISLKTRNSIIFSPHPRAKKVTQRAATLLLQAAVAAGAPENLIGWIDNPSIELAQRLMKFPGIGLL 182 (439)
T ss_pred CCCcchHHHHHHHHHHHHhcCCeEEEECCccchHHHHHHHHHHHHHHHHcCCChhhEEEEcCCCHHHHHHHHcCCCCCEE
Confidence 99999999999999999999999999999999999988888774 78999999999998777789999999999999
Q ss_pred EEeCCcHHHHHHHHHHHhcccceeEEEcCCCCCceEcCCCCHHHHHHHHHHHhhccCCCCcccCceEEEeCchHHHHHHH
Q 015042 155 CFTGSTDVGRLVMQAAAASNLKQVSLELGGKSPLLIFDDADLDTAADVALLGNLYNKGEICVASSRVFVQEGIYDKFEKK 234 (414)
Q Consensus 155 ~~tGs~~~g~~i~~~~a~~~~~~~~~e~gg~~~~iV~~dadl~~aa~~i~~~~~~~~Gq~C~a~~~i~V~~~i~d~f~~~ 234 (414)
.||||.. +.+.++ ++++|+++|+|||+|+||++|||++.|++.+++++|.|+||.|++.+|+|||+++||+|+++
T Consensus 183 ~FTGs~~----v~~~aa-~~~k~~~lElGGk~p~IV~~dADl~~Aa~~iv~~~~~~~GQ~C~a~~rv~V~~~i~d~f~~~ 257 (439)
T cd07081 183 LATGGPA----VVKAAY-SSGKPAIGVGAGNTPVVIDETADIKRAVQSIVKSKTFDNGVICASEQSVIVVDSVYDEVMRL 257 (439)
T ss_pred EEECCHH----HHHHHH-hcCCCEEEEcCCCCeEEEcCCCCHHHHHHHHHHHHhcCCCCCCCCCCEEEEcHHHHHHHHHH
Confidence 9999987 455565 78899999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhhcccCCCCCCCCcccccCCHHHHHHHHHHHHHHHHcCCEEEeCCccc--CCCCceeeeE---EEeeCC--Cccc
Q 015042 235 LLEKAKAWLVGDPFDPTVRQGPQISERHFDRILSYIEHGKREGATLLTGGKPI--GDKGYYIEPT---IFTNVK--EDMI 307 (414)
Q Consensus 235 l~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ga~v~~gg~~~--~~~g~~~~Pt---vl~~~~--~~~~ 307 (414)
|++++ ||+++.++++++.++++++.++|++++.|+... ...|+|+.|| ++.+++ ++|.
T Consensus 258 l~~~~---------------gpli~~~~~~~v~~~i~~a~~~Ga~~~gg~~~~~~~~~G~~~~pt~~~i~~~~~~~~~~~ 322 (439)
T cd07081 258 FEGQG---------------AYKLTAEELQQVQPVILKNGDVNRDIVGQDAYKIAAAAGLKVPQETRILIGEVTSLAEHE 322 (439)
T ss_pred HHHcC---------------CccCCHHHHHHHHHHHHhcCCcCCcccCCCHHHHHHHcCCccCCCceEEEEecCCCCCCc
Confidence 98863 799999999999999999999999875443211 1258899998 999888 9999
Q ss_pred ccccceecceEEEEeeCCHHHHHHHhhcC----CCCceEEEecCC---HHHHHHHHHhcceeEEEEcCcCC---CCCCCC
Q 015042 308 IAKEEIFGPVMALMKFKTVEEAIKSANNT----QYGLAAGIVTKD---LNVANTVSRSIRAGIIWINCYFG---FSMDCP 377 (414)
Q Consensus 308 ~~~~E~fgPvl~v~~~~~~~eai~~~n~~----~~gl~~sv~s~d---~~~~~~~~~~l~~g~v~iN~~~~---~~~~~p 377 (414)
+++||+||||++|++|+|+||||+++|++ +|||+++|||+| .+.++++++++++|.|+||.+.. ..-..-
T Consensus 323 i~~eE~FGPVl~v~~~~~~dEAi~~aN~~~n~~~~GLsa~V~T~d~~~~~~a~~~a~~l~~G~V~iN~~~~~~~~g~~~~ 402 (439)
T cd07081 323 PFAHEKLSPVLAMYRAANFADADAKALALKLEGGCGHTSAMYSDNIKAIENMNQFANAMKTSRFVKNGPCSQGGLGDLYN 402 (439)
T ss_pred hhhhCccCceEEEEEcCCHHHHHHHHHHHhhccCCCceEEEECCCcchHHHHHHHHhhCCceEEEEeCCccccccccccC
Confidence 99999999999999999999999999965 799999999999 99999999999999999997652 122344
Q ss_pred cccCCCCCC--Cc-----cchHHHHHhhheeeEEEe
Q 015042 378 YGGYKMSGF--GR-----EYGLESLYKYLQIKSVVT 406 (414)
Q Consensus 378 ~gG~~~sG~--g~-----~~g~~~~~~~~~~k~i~~ 406 (414)
|||++.+-. |. ..-.-+.++|++.|.|.+
T Consensus 403 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 438 (439)
T cd07081 403 FRGWPSMTLGCGTWGGNSVSENVGPKHLVNLKTVAL 438 (439)
T ss_pred CCCCeeEeeecCCCCCCCcCCCCChHhhheeeeeec
Confidence 655554322 22 122346788898887754
|
Coenzyme A acylating aldehyde dehydrogenase (ACDH), an NAD+ and CoA-dependent acetaldehyde dehydrogenase, acetylating (EC=1.2.1.10), functions as a single enzyme (such as the Ethanolamine utilization protein, EutE, in Salmonella typhimurium) or as part of a multifunctional enzyme to convert acetaldehyde into acetyl-CoA. The E. coli aldehyde-alcohol dehydrogenase includes the functional domains, alcohol dehydrogenase (ADH), ACDH, and pyruvate-formate-lyase deactivase; and the Entamoeba histolytica aldehyde-alcohol dehydrogenase 2 (ALDH20A1) includes the functional domains ADH and ACDH, and may be critical enzymes in the fermentative pathway. |
| >cd07127 ALDH_PAD-PaaZ Phenylacetic acid degradation proteins PaaZ (Escherichia coli) and PaaN (Pseudomonas putida)-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.4e-71 Score=563.77 Aligned_cols=395 Identities=17% Similarity=0.207 Sum_probs=341.7
Q ss_pred CHHHHHHHHHhHHHHHHHHHHhcCCChHHHhhc----hHHHHHHHHHHHHHhhhhhcCcccccC-CC------cccceee
Q 015042 1 MWKFADLIEEHVEELAALDALDAGKVYLRAKTA----EIPGAAEFLRFFAGAADKIHGEVLKMS-SE------LQGYTLR 69 (414)
Q Consensus 1 L~~~a~~l~~~~~~l~~~~~~etGk~~~e~~~~----ei~~~~~~l~~~a~~~~~~~~~~~~~~-~~------~~~~~~~ 69 (414)
|+++++.|++|+++|++++++|+||+..++.+. |++++++.++|++....++.+...... .+ .....++
T Consensus 112 l~~~a~~l~~~~~ela~a~~~e~Gk~~~~a~qa~~~~evd~a~e~~~~a~~~~~~~~~~~~w~~~~~~~~~l~~~k~~~~ 191 (549)
T cd07127 112 CLEILQRLNARSFEMAHAVMHTTGQAFMMAFQAGGPHAQDRGLEAVAYAWREMSRIPPTAEWEKPQGKHDPLAMEKTFTV 191 (549)
T ss_pred HHHHHHHHHhCHHHHHHHHHHHHCCCHHHHHhcccHHHHHHHHHHHHHHHHHHHhccccccccCCCCCcccccccceeEE
Confidence 578999999999999999999999999866532 799999999999988776654322110 11 1123478
Q ss_pred cCCceEEEEcCCccchHHHHHhHHHHHhhCCeEEeecCCCChHHHH----HHHHHHHHcCCCCCcEEEEeCC-chhhHHH
Q 015042 70 EPVGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLTAL----YYAHLAKLAGIPDGVLNVVPGF-GPTAGAA 144 (414)
Q Consensus 70 ~P~Gvv~~i~p~n~P~~~~~~~~~~aLaaGN~vv~kps~~~~~~~~----~l~~~l~~aG~p~g~v~~v~~~-~~~~~~~ 144 (414)
+|+||+++|+|||||+++.+.++++||++||+||+|||+.+++++. .+.++|.++|+|+|+||++++. +.++++.
T Consensus 192 ~P~GVv~vI~p~nfP~~~~~~~i~~ALaaGN~VVvKPs~~a~ls~~~~~~~i~~~l~eAGlP~gvv~~v~g~~~~~~~~~ 271 (549)
T cd07127 192 VPRGVALVIGCSTFPTWNGYPGLFASLATGNPVIVKPHPAAILPLAITVQVAREVLAEAGFDPNLVTLAADTPEEPIAQT 271 (549)
T ss_pred ecccEEEEEeCcCChHHHHHHHHHHHHhcCCeEEEECCcccchhHHHHHHHHHHHHHHcCcCcccEEEEeCCCcHHHHHH
Confidence 9999999999999999999999999999999999999999998764 5668999999999999999985 4678999
Q ss_pred hhhCCCccEEEEeCCcHHHHHHHHHHHhcccceeEEEcCCCCCceEcCCCCHHHHHHHHHHHhhccCCCCcccCceEEEe
Q 015042 145 ICSHMDIDYVCFTGSTDVGRLVMQAAAASNLKQVSLELGGKSPLLIFDDADLDTAADVALLGNLYNKGEICVASSRVFVQ 224 (414)
Q Consensus 145 l~~~~~v~~v~~tGs~~~g~~i~~~~a~~~~~~~~~e~gg~~~~iV~~dadl~~aa~~i~~~~~~~~Gq~C~a~~~i~V~ 224 (414)
|+.||+|+.|.||||+.+|+.|.+.++ .+|+++|+||||++||++|+|++.+++.+++++|.|+||.|++++|||||
T Consensus 272 L~~~p~v~~I~FTGS~~~G~~i~~~a~---~~~v~~ElGGkn~~IV~~dADl~~aa~~i~~~~f~~sGQ~C~a~~ri~V~ 348 (549)
T cd07127 272 LATRPEVRIIDFTGSNAFGDWLEANAR---QAQVYTEKAGVNTVVVDSTDDLKAMLRNLAFSLSLYSGQMCTTPQNIYVP 348 (549)
T ss_pred HHhCCCCCEEEEECCHHHHHHHHHHhc---cCcEEEecCCcCeEEECCCCCHHHHHHHHHHHHHccCCCCCCCCCEEEEE
Confidence 999999999999999999999999876 47999999999999999999999999999999999999999999999999
Q ss_pred Cc---------hHHHHHHHHHHHHhhcccCCCCCCCCcccccCCHHHHHHHHHHHHHHHHcCCEEEeCCcccC---CCC-
Q 015042 225 EG---------IYDKFEKKLLEKAKAWLVGDPFDPTVRQGPQISERHFDRILSYIEHGKREGATLLTGGKPIG---DKG- 291 (414)
Q Consensus 225 ~~---------i~d~f~~~l~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~---~~g- 291 (414)
++ +||+|+++|+++++++ +|+|.+..+.+||++++.+++++.+ ++..|+ +++||.... ..|
T Consensus 349 ~s~i~~~~g~~i~d~f~~~L~~~~~~l-~Gdp~~~~~~~Gpli~~~~~~ri~~----a~~~g~-vl~gg~~~~~~~~~g~ 422 (549)
T cd07127 349 RDGIQTDDGRKSFDEVAADLAAAIDGL-LADPARAAALLGAIQSPDTLARIAE----ARQLGE-VLLASEAVAHPEFPDA 422 (549)
T ss_pred CCccccccchhHHHHHHHHHHHHHHHh-cCCccccccccCCcCCHHHHHHHHH----HHhCCC-EEEcCCcCCCcCCCCc
Confidence 99 8999999999999999 9999999999999999999999865 555564 778876542 134
Q ss_pred ceeeeEEEeeCCCcccccccceecceEEEEeeCCHHHHHHHhhcCC--C-CceEEEecCCHHHHHHHHHhcc-e-eEEEE
Q 015042 292 YYIEPTIFTNVKEDMIIAKEEIFGPVMALMKFKTVEEAIKSANNTQ--Y-GLAAGIVTKDLNVANTVSRSIR-A-GIIWI 366 (414)
Q Consensus 292 ~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~--~-gl~~sv~s~d~~~~~~~~~~l~-~-g~v~i 366 (414)
++++|||+...+++|.+++||+||||++|++|+|.+||++++|++. + +|++||||+|.+.++++.+++. + |.++|
T Consensus 423 ~~~~Ptvl~~~~~d~~i~~eE~FGPVl~V~~~~d~~eai~~an~~~~~~ggLt~sVfs~D~~~~~~~~~~~~~~~~~~~i 502 (549)
T cd07127 423 RVRTPLLLKLDASDEAAYAEERFGPIAFVVATDSTDHSIELARESVREHGAMTVGVYSTDPEVVERVQEAALDAGVALSI 502 (549)
T ss_pred eEEeCEEEEeCCCCCHHHcCCCcCceEEEEEeCCHHHHHHHHHhcccCCCCceEEEEcCCHHHHHHHHHHHHHhcCcEEE
Confidence 4669999998889999999999999999999999999999999973 4 6999999999999999999954 4 49999
Q ss_pred cCcCCCCCC--CCcccCCCCCCCc-cchHHHHHhhheeeEE
Q 015042 367 NCYFGFSMD--CPYGGYKMSGFGR-EYGLESLYKYLQIKSV 404 (414)
Q Consensus 367 N~~~~~~~~--~p~gG~~~sG~g~-~~g~~~~~~~~~~k~i 404 (414)
|+....... +||||.+.||.+. .+..+....|...+--
T Consensus 503 N~tg~v~~~q~~~Fg~~~~sg~n~~a~~~~~~~~fv~~r~~ 543 (549)
T cd07127 503 NLTGGVFVNQSAAFSDFHGTGANPAANAALTDGAFVANRFR 543 (549)
T ss_pred cCCceEEEecCcCCCCCCCCCCCcccccccchhhhhhcceE
Confidence 977654433 5599999999984 5556777777665533
|
Phenylacetic acid degradation (PAD) proteins PaaZ (Escherichia coli) and PaaN (Pseudomonas putida) are putative aromatic ring cleavage enzymes of the aerobic PA catabolic pathway. PaaZ mutants were defective for growth with PA as a sole carbon source due to interruption of the putative ring opening system. This CD is limited to bacterial monofunctional enzymes. |
| >cd07079 ALDH_F18-19_ProA-GPR Gamma-glutamyl phosphate reductase (GPR), aldehyde dehydrogenase families 18 and 19 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-71 Score=553.80 Aligned_cols=356 Identities=21% Similarity=0.259 Sum_probs=310.4
Q ss_pred CHHHHHHHHHhHHHHHHHHHHhcCCChH----HHh-------hchHHHHHHHHHHHHHhhhhhcCccccc---CCCcccc
Q 015042 1 MWKFADLIEEHVEELAALDALDAGKVYL----RAK-------TAEIPGAAEFLRFFAGAADKIHGEVLKM---SSELQGY 66 (414)
Q Consensus 1 L~~~a~~l~~~~~~l~~~~~~etGk~~~----e~~-------~~ei~~~~~~l~~~a~~~~~~~~~~~~~---~~~~~~~ 66 (414)
|+++++.|++|+++|++++++|+||+.. ++. ..|+..+++.+++++...+. .+...+. ..+...+
T Consensus 26 L~~~a~~l~~~~~~la~~~~~d~gk~~e~G~~~a~~~~l~~~~~ev~~~~~~~~~~a~~~~~-~g~~~~~~~~~~~~~~~ 104 (406)
T cd07079 26 LLAIADALEANRDEILEANAKDLAAAREAGLSEALLDRLLLTPERIEAMAEGLRQVAALPDP-VGEVLRGWTLPNGLQIE 104 (406)
T ss_pred HHHHHHHHHhchHHHHHHhhhhHHHHHHcCCCHHHHhHhcCCHHHHHHHHHHHHHHHhcCCC-CcccccceeccCcccee
Confidence 5789999999999999999777666533 222 24899999999999876543 2333222 1233567
Q ss_pred eeecCCceEEEEcCCccchHHHHHhHHHHHhhCCeEEeecCCCChHHHHHHHHHHH----HcCCCCCcEEEEeCCch-hh
Q 015042 67 TLREPVGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLTALYYAHLAK----LAGIPDGVLNVVPGFGP-TA 141 (414)
Q Consensus 67 ~~~~P~Gvv~~i~p~n~P~~~~~~~~~~aLaaGN~vv~kps~~~~~~~~~l~~~l~----~aG~p~g~v~~v~~~~~-~~ 141 (414)
.+++|+|||++|+|| +| ...++++++||++||+||+|||+.+|.++..+.+++. ++|+|+|++|++++.+. +.
T Consensus 105 ~~~~PlGVV~~I~p~-~p-~~~~~~~~~ALaaGN~vVlKps~~tp~~~~~l~~~~~~~l~~aG~P~gvv~~v~g~~~~~~ 182 (406)
T cd07079 105 KVRVPLGVIGIIYES-RP-NVTVDAAALCLKSGNAVILRGGSEALHSNRALVEIIQEALEEAGLPEDAVQLIPDTDREAV 182 (406)
T ss_pred EEecceEEEEEecCC-Cc-chHHHHHHHHHHhCCEEEEeCCchhhhHHHHHHHHHHHHHHHcCCCcccEEEecCCChHHH
Confidence 899999999999985 55 6788999999999999999999999999999998886 89999999999998544 57
Q ss_pred HHHhhhCCCccEEEEeCCcHHHHHHHHHHHhcccceeEEEcCCCCCceEcCCCCHHHHHHHHHHHhhccCCCCcccCceE
Q 015042 142 GAAICSHMDIDYVCFTGSTDVGRLVMQAAAASNLKQVSLELGGKSPLLIFDDADLDTAADVALLGNLYNKGEICVASSRV 221 (414)
Q Consensus 142 ~~~l~~~~~v~~v~~tGs~~~g~~i~~~~a~~~~~~~~~e~gg~~~~iV~~dadl~~aa~~i~~~~~~~~Gq~C~a~~~i 221 (414)
++.|.+||++|+|+||||+.+|+.|++.+ ++|+++|+|||||+||++|||++.|++.+++++|.|+| .|++++||
T Consensus 183 ~~~l~~~~~v~~i~fTGS~~~G~~i~~~a----~~pv~lELGGk~p~IV~~dADl~~Aa~~i~~~~f~n~G-~C~a~~rv 257 (406)
T cd07079 183 QELLKLDDYIDLIIPRGGAGLIRFVVENA----TIPVIKHGDGNCHVYVDESADLEMAVRIVVNAKTQRPS-VCNALETL 257 (406)
T ss_pred HHHHcCCCCccEEEeCCCHHHHHHHHHhc----CCCEEeecCCcceEEEeCCCCHHHHHHHHHHcccCCCc-ccccceeE
Confidence 88899999999999999999999998765 59999999999999999999999999999999999999 99999999
Q ss_pred EEeCchHHHHHHHHHHHHhhcccCCCCCCCCcccccCCHHHHHHHHHHHHHHHHcCCEEEeCCcccCCCCceeeeEEEee
Q 015042 222 FVQEGIYDKFEKKLLEKAKAWLVGDPFDPTVRQGPQISERHFDRILSYIEHGKREGATLLTGGKPIGDKGYYIEPTIFTN 301 (414)
Q Consensus 222 ~V~~~i~d~f~~~l~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~~~g~~~~Ptvl~~ 301 (414)
|||+++||+|+++|++.++++ |++++.|+.. ..|++||
T Consensus 258 ~V~~si~d~f~~~l~~~~~~~----------------------------------ga~~~~g~~~----~~~~~pt---- 295 (406)
T cd07079 258 LVHRDIAEEFLPKLAEALREA----------------------------------GVELRGDEET----LAILPGA---- 295 (406)
T ss_pred EEeHHHHHHHHHHHHHHHHHC----------------------------------CCEEecCHHH----HHhcccc----
Confidence 999999999999999987652 4454433221 1377888
Q ss_pred CCCcccccccceecceEEEEeeCCHHHHHHHhhcCCCCceEEEecCCHHHHHHHHHhcceeEEEEcCcCCCCCCCCcccC
Q 015042 302 VKEDMIIAKEEIFGPVMALMKFKTVEEAIKSANNTQYGLAAGIVTKDLNVANTVSRSIRAGIIWINCYFGFSMDCPYGGY 381 (414)
Q Consensus 302 ~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~sv~s~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~p~gG~ 381 (414)
++++|.+++||+||||++|++|+|+||||+++|+++|||++||||+|.+.++++++++++|.|+||++....+..||||.
T Consensus 296 v~~d~~i~~eE~FGPVl~v~~~~~~deAi~~aN~~~~GLsa~ift~d~~~a~~~~~~~~~G~v~iN~~~~~~~~~pfg~~ 375 (406)
T cd07079 296 KPATEEDWGTEYLDLILAVKVVDSLDEAIAHINRYGSGHTEAIVTENYETAERFLREVDSAAVYVNASTRFTDGGEFGLG 375 (406)
T ss_pred cCCCcchhhhhhhCceeEEEEeCCHHHHHHHHHHhCCccccEeeeCCHHHHHHHHHhCCeeEEEEeCCCcccCCCccccc
Confidence 78999999999999999999999999999999999999999999999999999999999999999998776667899999
Q ss_pred CCCCC----CccchHHHHHhhheeeEEEe
Q 015042 382 KMSGF----GREYGLESLYKYLQIKSVVT 406 (414)
Q Consensus 382 ~~sG~----g~~~g~~~~~~~~~~k~i~~ 406 (414)
|.||. |+++|.+++++||+.|+|+.
T Consensus 376 ~~sG~~~~~g~~~g~~~l~~~~~~k~i~~ 404 (406)
T cd07079 376 AEIGISTQKLHARGPMGLEELTTYKYIVR 404 (406)
T ss_pred eeeeeecCCCcCCCCcChHHhcEEEEEEe
Confidence 99998 89999999999999999865
|
Gamma-glutamyl phosphate reductase (GPR), a L-proline biosynthetic pathway (PBP) enzyme that catalyzes the NADPH dependent reduction of L-gamma-glutamyl 5-phosphate into L-glutamate 5-semialdehyde and phosphate. The glutamate route of the PBP involves two enzymatic steps catalyzed by gamma-glutamyl kinase (GK, EC 2.7.2.11) and GPR (EC 1.2.1.41). These enzymes are fused into the bifunctional enzyme, ProA or delta(1)-pyrroline-5-carboxylate synthetase (P5CS) in plants and animals, whereas they are separate enzymes in bacteria and yeast. In humans, the P5CS (ALDH18A1), an inner mitochondrial membrane enzyme, is essential to the de novo synthesis of the amino acids proline and arginine. Tomato (Lycopersicon esculentum) has both the prokaryotic-like polycistronic operons encoding GK and GPR (PRO1, ALDH19) and the full-length, bifunctional P5CS (PRO2, ALDH18B1). |
| >PRK00197 proA gamma-glutamyl phosphate reductase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.9e-71 Score=550.73 Aligned_cols=359 Identities=23% Similarity=0.260 Sum_probs=312.2
Q ss_pred CHHHHHHHHHhHHHHHHHHHHhcCCChH----HHh-------hchHHHHHHHHHHHHHhhhhhcCccccc---CCCcccc
Q 015042 1 MWKFADLIEEHVEELAALDALDAGKVYL----RAK-------TAEIPGAAEFLRFFAGAADKIHGEVLKM---SSELQGY 66 (414)
Q Consensus 1 L~~~a~~l~~~~~~l~~~~~~etGk~~~----e~~-------~~ei~~~~~~l~~~a~~~~~~~~~~~~~---~~~~~~~ 66 (414)
|+++++.|++|+++|++++++|+||+.. ++. ..|+..+++.+++++.+.+.. +...+. ..+...+
T Consensus 32 L~~~a~~l~~~~~~la~~~~~d~g~~~~~g~~~~~~~~~~~~~~ev~~~~~~~~~~a~~~~~~-g~~~~~~~~~~~~~~~ 110 (417)
T PRK00197 32 LLAIADALEANAAEILAANAKDLAAARANGLSAAMLDRLLLTEARIEGIAEGLRQVAALPDPV-GEVLDGWTLPNGLRIG 110 (417)
T ss_pred HHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCHHHHHHhcCCHHHHHHHHHHHHHHhhcCCCc-cccccceecCCCceEE
Confidence 5789999999999999999988877642 322 148899999999998876543 433322 1233578
Q ss_pred eeecCCceEEEEcCCccchHHHHHhHHHHHhhCCeEEeecCCCChHHHHHHHHHH----HHcCCCCCcEEEEeCCc-hhh
Q 015042 67 TLREPVGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLTALYYAHLA----KLAGIPDGVLNVVPGFG-PTA 141 (414)
Q Consensus 67 ~~~~P~Gvv~~i~p~n~P~~~~~~~~~~aLaaGN~vv~kps~~~~~~~~~l~~~l----~~aG~p~g~v~~v~~~~-~~~ 141 (414)
.+++|+|||++|+||| | ..+++++++||++||+||+|||+.+|.++..+.+++ .++|+|+|++|++++.+ .+.
T Consensus 111 ~~~~PlGVv~~I~p~p-~-~~~~~~~~~ALaaGN~vVlKPs~~tp~t~~~l~~l~~~~l~~aGlP~gv~~~v~g~~~~~~ 188 (417)
T PRK00197 111 RVRVPLGVIGVIYESR-P-NVTVDAAALCLKSGNAVILRGGSEAIHSNRALVAVIQEALEEAGLPADAVQLVETTDRAAV 188 (417)
T ss_pred EEecCceEEEEEcCCC-c-hHHHHHHHHHHHhCCeEEEecChhhhHHHHHHHHHHHHHHHHcCcChhhEEEecCCChHHH
Confidence 8999999999999875 4 778889999999999999999999999999998874 68999999999999644 447
Q ss_pred HHHhhhCCCccEEEEeCCcHHHHHHHHHHHhcccceeEEEcCCCCCceEcCCCCHHHHHHHHHHHhhccCCCCcccCceE
Q 015042 142 GAAICSHMDIDYVCFTGSTDVGRLVMQAAAASNLKQVSLELGGKSPLLIFDDADLDTAADVALLGNLYNKGEICVASSRV 221 (414)
Q Consensus 142 ~~~l~~~~~v~~v~~tGs~~~g~~i~~~~a~~~~~~~~~e~gg~~~~iV~~dadl~~aa~~i~~~~~~~~Gq~C~a~~~i 221 (414)
++.|..||++|+|+||||+.+|+.+++.+ ++|+++|+|||||+||++|||++.|++.+++++|.|+| .|++++|+
T Consensus 189 ~~~l~~~~~v~~V~fTGS~~~g~~i~~~a----~~~~~lELGGk~p~IV~~dAdl~~Aa~~iv~~~~~n~G-~C~a~~rv 263 (417)
T PRK00197 189 GELLKLDGYVDVIIPRGGAGLIRRVVENA----TVPVIEHGDGICHIYVDESADLDKALKIVLNAKTQRPS-VCNALETL 263 (417)
T ss_pred HHHhccCCCccEEEecCCHHHHHHHHHhc----CCCEEeecCCcceEEEeCCCCHHHHHHHHHHhccCCCc-ccccceEE
Confidence 88898899999999999999999998764 58999999999999999999999999999999999999 99999999
Q ss_pred EEeCchHHHHHHHHHHHHhhcccCCCCCCCCcccccCCHHHHHHHHHHHHHHHHcCCEEEeCCcccCCCCceeeeEEEee
Q 015042 222 FVQEGIYDKFEKKLLEKAKAWLVGDPFDPTVRQGPQISERHFDRILSYIEHGKREGATLLTGGKPIGDKGYYIEPTIFTN 301 (414)
Q Consensus 222 ~V~~~i~d~f~~~l~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~~~g~~~~Ptvl~~ 301 (414)
|||+++||+|+++|++.+++++++. + ++... .+ | .|||+
T Consensus 264 ~V~~~i~d~f~~~l~~~~~~~~~~~----------------------------------~-~~~~~--~~-~-~PTi~-- 302 (417)
T PRK00197 264 LVHEAIAEEFLPKLAEALAEAGVEL----------------------------------R-GDEAA--LA-L-LPDVV-- 302 (417)
T ss_pred EEEHHHhHHHHHHHHHHHHHCCCeE----------------------------------e-cCHHH--HH-h-hcccc--
Confidence 9999999999999999998875321 1 11100 11 2 29998
Q ss_pred CCCcccccccceecceEEEEeeCCHHHHHHHhhcCCCCceEEEecCCHHHHHHHHHhcceeEEEEcCcCCCCCCCCcccC
Q 015042 302 VKEDMIIAKEEIFGPVMALMKFKTVEEAIKSANNTQYGLAAGIVTKDLNVANTVSRSIRAGIIWINCYFGFSMDCPYGGY 381 (414)
Q Consensus 302 ~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~sv~s~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~p~gG~ 381 (414)
+++|.+++||+||||++|++|+|+||||+++|+++|||++||||+|.++++++++++++|.|+||++....+..||||.
T Consensus 303 -~~~~~i~~eE~FGPVl~v~~~~~~deAi~~aN~~~~GL~a~V~t~d~~~~~~~~~~l~~G~v~VN~~~~~~~~~p~G~~ 381 (417)
T PRK00197 303 -PATEEDWDTEYLDLILAVKVVDSLDEAIAHINRYGSGHTEAIVTEDYAAAERFLNEVDSAAVYVNASTRFTDGGEFGLG 381 (417)
T ss_pred -cCCcchhhhhhhCceEEEEEeCCHHHHHHHHHhcCCCCceEEEeCCHHHHHHHHHhCCeeEEEEeCCCccCCCCccccc
Confidence 5689999999999999999999999999999999999999999999999999999999999999998776677899999
Q ss_pred CCCCCC----ccchHHHHHhhheeeEEEeeCC
Q 015042 382 KMSGFG----REYGLESLYKYLQIKSVVTPIY 409 (414)
Q Consensus 382 ~~sG~g----~~~g~~~~~~~~~~k~i~~~~~ 409 (414)
|.||+| +++|++|+++||++|++++..+
T Consensus 382 ~~sG~g~~~~~~~g~~~l~~~~~~k~v~~~~~ 413 (417)
T PRK00197 382 AEIGISTQKLHARGPMGLEELTTYKYIVLGDG 413 (417)
T ss_pred hhheeecCCCcCCCccchHhhcEEEEEEECCC
Confidence 999999 9999999999999999987654
|
|
| >TIGR02518 EutH_ACDH acetaldehyde dehydrogenase (acetylating) | Back alignment and domain information |
|---|
Probab=100.00 E-value=8e-70 Score=550.28 Aligned_cols=383 Identities=18% Similarity=0.161 Sum_probs=330.1
Q ss_pred CHHHHHHHHHhHHHHHHHHHHhcCCChHHHhhchHHHHHHHHHHHHHhhhhhcCcccccCCCcccceeecCCceEEEEcC
Q 015042 1 MWKFADLIEEHVEELAALDALDAGKVYLRAKTAEIPGAAEFLRFFAGAADKIHGEVLKMSSELQGYTLREPVGVVGHIIP 80 (414)
Q Consensus 1 L~~~a~~l~~~~~~l~~~~~~etGk~~~e~~~~ei~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p 80 (414)
|+++++.|++|+++|++++++|+||+..+++..+.......+.+++...+. .+. +..+.+...+.+++|+|||++|+|
T Consensus 36 L~~~a~~l~~~~~ela~~~~~E~Gk~~~~~~~~~~~~~~~~~~~~~~~~~~-~G~-~~~~~~~~~~~~~~PlGVV~~I~P 113 (488)
T TIGR02518 36 VKAIVDAAYENAVKLAKMANEETGFGKWEDKVIKNVFAATIVYDSIKDMKT-IGI-LSEDKEKKVIEIAVPVGVVAGLIP 113 (488)
T ss_pred HHHHHHHHHhhHHHHHHHHHHHhCCChHHHHHHHHHHHHHHHHHHHhhCcc-cce-ecCCCCcceEEEEecceEEEEEcc
Confidence 578999999999999999999999998875433333444555544443222 232 222334556789999999999999
Q ss_pred CccchHHHHHhHHHHHhhCCeEEeecCCCChHHHHHH----HHHHHHcCCCCCcEEEEeCCchhhHHHhhhCCCccEEEE
Q 015042 81 WNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLTALYY----AHLAKLAGIPDGVLNVVPGFGPTAGAAICSHMDIDYVCF 156 (414)
Q Consensus 81 ~n~P~~~~~~~~~~aLaaGN~vv~kps~~~~~~~~~l----~~~l~~aG~p~g~v~~v~~~~~~~~~~l~~~~~v~~v~~ 156 (414)
||||+..+.+++++||++||+||+|||+.+|.++..+ .+++.++|+|+|++|++++.+.+.++.|+.||+||+|+|
T Consensus 114 ~n~P~~~~~~k~~~AL~aGNaVIlKps~~a~~s~~~~~~~l~~~l~eaGlP~gvv~~v~g~~~e~~~~L~~~~~vd~V~f 193 (488)
T TIGR02518 114 STNPTSTAIYKTLISIKARNAIVFSPHPNAKKCIIETVKLMRKAAEEAGAPEGAIGCITVPTIEGTNELMKNKDTSLILA 193 (488)
T ss_pred cCChHHHHHHHHHHHHHcCCcEEEECCccchHHHHHHHHHHHHHHHHcCcCcccEEEEcCCCHHHHHHHHhCCCcCEEEE
Confidence 9999999999999999999999999999999999984 555689999999999999877889999999999999999
Q ss_pred eCCcHHHHHHHHHHHhcccceeEEEcCCCCCceEcCCCCHHHHHHHHHHHhhccCCCCcccCceEEEeCchHHHHHHHHH
Q 015042 157 TGSTDVGRLVMQAAAASNLKQVSLELGGKSPLLIFDDADLDTAADVALLGNLYNKGEICVASSRVFVQEGIYDKFEKKLL 236 (414)
Q Consensus 157 tGs~~~g~~i~~~~a~~~~~~~~~e~gg~~~~iV~~dadl~~aa~~i~~~~~~~~Gq~C~a~~~i~V~~~i~d~f~~~l~ 236 (414)
|||...++. ++ .+++|+++|+|||+|+||++|||++.|++.+++++|+|+||.|++.+++|||+++||+|+++|+
T Consensus 194 TGs~~v~~~----a~-~~~~pv~~e~gGn~p~iV~~dADld~Aa~~iv~sk~~~~Gq~C~a~~rllV~~~i~d~f~~~L~ 268 (488)
T TIGR02518 194 TGGEAMVKA----AY-SSGTPAIGVGPGNGPAYIERTANVKKAVRDIIDSKTFDNGTICASEQSIIVEECNKDAVVEELK 268 (488)
T ss_pred eCCHHHHHH----HH-HcCCCEEEEcCCCCeEEEeCCCCHHHHHHHHHHHHhcCCCCCCCCCCEEEEeHHHHHHHHHHHH
Confidence 999996543 33 5679999999999999999999999999999999999999999999999999999999999999
Q ss_pred HH-------HhhcccCCC-CCCCCcccccCCHHHHHHHHHHHHHHHHcCCEEEeCCcccCCCCceeeeEEEeeCCCcccc
Q 015042 237 EK-------AKAWLVGDP-FDPTVRQGPQISERHFDRILSYIEHGKREGATLLTGGKPIGDKGYYIEPTIFTNVKEDMII 308 (414)
Q Consensus 237 ~~-------~~~~~~g~~-~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~~ 308 (414)
++ .+.+++|+| .++++.+||+++..+++++.+++++++++|+++++||.. .+++++++
T Consensus 269 ~~g~~~~~~~~~~~vg~~~~~~~~~~gp~i~~~~~~~i~~~i~~av~~gakll~gg~~--------------~v~~~~~~ 334 (488)
T TIGR02518 269 KQGGYFLTAEEAEKLGKFILRPNGTMNPQIVGKSPQVIANLAGLTVPEDAKVLIGEQN--------------GVGNKNPY 334 (488)
T ss_pred HhhhhhcCHHHHHhhcccccCCCCCcCcccccchHHHHHHHhccccCCCCEEEEeCCC--------------CCCCCCcc
Confidence 98 888999996 678899999999999999999999999999999999853 24667776
Q ss_pred cccceecceEEEEeeCCHHHHHHHhhc----CCCCceEEEecCCHHHHHHHHHhcceeEEEEcCcCC---------CCCC
Q 015042 309 AKEEIFGPVMALMKFKTVEEAIKSANN----TQYGLAAGIVTKDLNVANTVSRSIRAGIIWINCYFG---------FSMD 375 (414)
Q Consensus 309 ~~~E~fgPvl~v~~~~~~~eai~~~n~----~~~gl~~sv~s~d~~~~~~~~~~l~~g~v~iN~~~~---------~~~~ 375 (414)
++|.||||++|++|+|+||||+++|+ .+|||+++|||+|.+.++++++++++|+|+||++.. +.+.
T Consensus 335 -~~E~fgPVl~v~~~~~~dEAI~~an~~i~~~~~Glta~I~T~d~~~a~~f~~~i~ag~V~VN~~~~~~~~Ga~t~~~~~ 413 (488)
T TIGR02518 335 -SREKLTTILAFYTEENWHEACELSIELLQNEGAGHTLIIHSENKDIVREFALKKPVSRMLVNTGGSLGGIGATTNLVPA 413 (488)
T ss_pred -ccCccCceEEEEEeCCHHHHHHHHHHhhhcCCCCCeEEEEeCCHHHHHHHHHhCCeeEEEEcCCCcccccccccCCCcc
Confidence 79999999999999999999999887 689999999999999999999999999999997642 2222
Q ss_pred --CCcccCCCCCCCccchHHHHHhhheeeEEEeeC
Q 015042 376 --CPYGGYKMSGFGREYGLESLYKYLQIKSVVTPI 408 (414)
Q Consensus 376 --~p~gG~~~sG~g~~~g~~~~~~~~~~k~i~~~~ 408 (414)
+-||+++.++++ .+.+++++++.|.|....
T Consensus 414 ~~~G~G~~~g~st~---~~v~~~~l~~~k~v~~~~ 445 (488)
T TIGR02518 414 FTLGCGAVGGSSTS---DNITPENLINIRRVAYGV 445 (488)
T ss_pred ccccccccCCCcCC---CCCCHHHhheeeEEEecc
Confidence 226666655554 499999999999998765
|
|
| >cd07122 ALDH_F20_ACDH Coenzyme A acylating aldehyde dehydrogenase (ACDH), ALDH family 20-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.9e-70 Score=545.14 Aligned_cols=383 Identities=22% Similarity=0.268 Sum_probs=327.0
Q ss_pred CHHHHHHHHHhHHHHHHHHHHhcCCChHHHhhchHHHHHH-HHHHHHHhhhhhcCcccccCCCcccceeecCCceEEEEc
Q 015042 1 MWKFADLIEEHVEELAALDALDAGKVYLRAKTAEIPGAAE-FLRFFAGAADKIHGEVLKMSSELQGYTLREPVGVVGHII 79 (414)
Q Consensus 1 L~~~a~~l~~~~~~l~~~~~~etGk~~~e~~~~ei~~~~~-~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~ 79 (414)
|+++++.|++|+++|++.+++|+|||..++...|+..+++ .+++++.. +..+. .....+...+++++|+|||++|+
T Consensus 27 L~~~a~~l~~~~eela~~~~~E~Gk~~~ea~~~e~~~~~~~~~~~~~~~--~~~g~-~~~~~~~~~~~~~~P~GVv~~I~ 103 (436)
T cd07122 27 VEAVAWAAADAAEELAKMAVEETGMGVVEDKVIKNHFASEYVYNDIKDM--KTVGV-IEEDEEKGIVEIAEPVGVIAALI 103 (436)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHHHHHHHhcC--cceee-eccCCCCCeEEEeecccEEEEEe
Confidence 5789999999999999999999999999876557777777 77777752 22222 12222345678999999999999
Q ss_pred CCccchHHHHHhHHHHHhhCCeEEeecCCCChHHHHHHHHHH----HHcCCCCCcEEEEeCCchhhHHHhhhCCCccEEE
Q 015042 80 PWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLTALYYAHLA----KLAGIPDGVLNVVPGFGPTAGAAICSHMDIDYVC 155 (414)
Q Consensus 80 p~n~P~~~~~~~~~~aLaaGN~vv~kps~~~~~~~~~l~~~l----~~aG~p~g~v~~v~~~~~~~~~~l~~~~~v~~v~ 155 (414)
|||||+...++++++||++||+||+|||+.+|+++..+.+++ .++|+|+|+++++++.+.+.++.|+.||+||.|.
T Consensus 104 pwN~P~~~~~~~~~~ALaaGN~VVlKps~~tp~~~~~~~~~~~~~l~eaG~P~g~v~~v~g~~~~~~~~l~~~~~v~~v~ 183 (436)
T cd07122 104 PSTNPTSTAIFKALIALKTRNAIIFSPHPRAKKCSIEAAKIMREAAVAAGAPEGLIQWIEEPSIELTQELMKHPDVDLIL 183 (436)
T ss_pred CCCCchHHHHHHHHHHHHcCCcEEEECCcchhhHHHHHHHHHHHHHHHcCCCchhEEEecCCChHHHHHHHcCCCcCEEE
Confidence 999999999999999999999999999999999999887775 5799999999999987777899999999999999
Q ss_pred EeCCcHHHHHHHHHHHhcccceeEEEcCCCCCceEcCCCCHHHHHHHHHHHhhccCCCCcccCceEEEeCchHHHHHHHH
Q 015042 156 FTGSTDVGRLVMQAAAASNLKQVSLELGGKSPLLIFDDADLDTAADVALLGNLYNKGEICVASSRVFVQEGIYDKFEKKL 235 (414)
Q Consensus 156 ~tGs~~~g~~i~~~~a~~~~~~~~~e~gg~~~~iV~~dadl~~aa~~i~~~~~~~~Gq~C~a~~~i~V~~~i~d~f~~~l 235 (414)
||||+.+++ .++ .+++|+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|
T Consensus 184 ftGs~~v~~----~a~-~~~~~~~~elgG~~p~iV~~dADl~~A~~~i~~~~f~~~GQ~C~a~~rv~V~~~i~d~f~~~l 258 (436)
T cd07122 184 ATGGPGMVK----AAY-SSGKPAIGVGPGNVPAYIDETADIKRAVKDIILSKTFDNGTICASEQSVIVDDEIYDEVRAEL 258 (436)
T ss_pred EcCCHHHHH----HHH-hcCCCEEEecCCCCeEEEcCCCCHHHHHHHHHHHhhccCCCCCCCCCEEEEechhHHHHHHHH
Confidence 999999654 344 678999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhhc-------ccCCC-CCCCCcccccCCHHHHHHHHHHHHHHHHcCCEEEeCCcccCCCCceeeeEEEeeCCCccc
Q 015042 236 LEKAKAW-------LVGDP-FDPTVRQGPQISERHFDRILSYIEHGKREGATLLTGGKPIGDKGYYIEPTIFTNVKEDMI 307 (414)
Q Consensus 236 ~~~~~~~-------~~g~~-~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~ 307 (414)
+++...+ ++|++ .+.++.+||+++..+++++.+++..+..+|+++++++ +.+++++|+
T Consensus 259 ~~~~~~l~~~~~~~~v~~~~~~~~~~~gp~~~~~~~~~~~~~~~~~~~~ga~vl~~~--------------~~~v~~~~~ 324 (436)
T cd07122 259 KRRGAYFLNEEEKEKLEKALFDDGGTLNPDIVGKSAQKIAELAGIEVPEDTKVLVAE--------------ETGVGPEEP 324 (436)
T ss_pred HHhcceecCHHHHHHHHHHhhcCCCCcCccccCcCHHHHHHHcCCCCCCCCeEEEEe--------------cCCCCCCCc
Confidence 9998887 88888 4677889999999999888888777777777777655 346788999
Q ss_pred ccccceecceEEEEeeCCHHHHHHHhhcC----CCCceEEEecCCHHHHHHHHHhcceeEEEEcCcCCCC-CC-----CC
Q 015042 308 IAKEEIFGPVMALMKFKTVEEAIKSANNT----QYGLAAGIVTKDLNVANTVSRSIRAGIIWINCYFGFS-MD-----CP 377 (414)
Q Consensus 308 ~~~~E~fgPvl~v~~~~~~~eai~~~n~~----~~gl~~sv~s~d~~~~~~~~~~l~~g~v~iN~~~~~~-~~-----~p 377 (414)
++ +|.||||++|++|+|++||++++|++ +|||++||||+|.++++++++++++|.||||++..+. .+ .|
T Consensus 325 ~~-~E~FGPVl~v~~~~~~~eAi~~aN~~~~~~~~GLsa~V~T~d~~~a~~~~~~l~aG~V~IN~~~~~~~~g~~~~~~~ 403 (436)
T cd07122 325 LS-REKLSPVLAFYRAEDFEEALEKARELLEYGGAGHTAVIHSNDEEVIEEFALRMPVSRILVNTPSSLGGIGDTYNGLA 403 (436)
T ss_pred ch-hcccCCeEEEEEeCCHHHHHHHHHHHHhccCCCceEEEEcCCHHHHHHHHhhCCceEEEEeCCccccccCccCCCCC
Confidence 87 56799999999999999999999997 7999999999999999999999999999999876421 11 11
Q ss_pred cc---cCCCCCCCccchHHHHHhhheeeEEEe
Q 015042 378 YG---GYKMSGFGREYGLESLYKYLQIKSVVT 406 (414)
Q Consensus 378 ~g---G~~~sG~g~~~g~~~~~~~~~~k~i~~ 406 (414)
+. |.|..|.+...+.-+.++|++.++|.+
T Consensus 404 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 435 (436)
T cd07122 404 PSLTLGCGSWGGNSTSDNVGPKHLLNIKRVAY 435 (436)
T ss_pred ceeeeeccccCCCcCCCCCChHHhheeEeecc
Confidence 11 233335555666678899999988754
|
Coenzyme A acylating aldehyde dehydrogenase (ACDH, EC=1.2.1.10), an NAD+ and CoA-dependent acetaldehyde dehydrogenase, functions as a single enzyme (such as the Ethanolamine utilization protein, EutE, in Salmonella typhimurium) or as part of a multifunctional enzyme to convert acetaldehyde into acetyl-CoA . The E. coli aldehyde-alcohol dehydrogenase includes the functional domains, alcohol dehydrogenase (ADH), ACDH, and pyruvate-formate-lyase deactivase; and the Entamoeba histolytica aldehyde-alcohol dehydrogenase 2 (ALDH20A1) includes the functional domains ADH and ACDH and may be critical enzymes in the fermentative pathway. |
| >PLN02418 delta-1-pyrroline-5-carboxylate synthase | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.8e-69 Score=565.58 Aligned_cols=354 Identities=21% Similarity=0.231 Sum_probs=313.5
Q ss_pred CHHHHHHHHHhHHHHHHHH------HHhcC--CChHHHh---hchHHHHHHHHHHHHHhhhhhcCcccc---cCCCcccc
Q 015042 1 MWKFADLIEEHVEELAALD------ALDAG--KVYLRAK---TAEIPGAAEFLRFFAGAADKIHGEVLK---MSSELQGY 66 (414)
Q Consensus 1 L~~~a~~l~~~~~~l~~~~------~~etG--k~~~e~~---~~ei~~~~~~l~~~a~~~~~~~~~~~~---~~~~~~~~ 66 (414)
|+++++.|++|.++|++++ ++|+| ||+.+.. ..|+..+++.+++++... +..+...+ ...+...+
T Consensus 322 L~~~a~~l~~~~~ela~~~~~d~~~~~E~G~~k~~~~~~~~~~~ev~~~~~~~~~~a~~~-~~~g~~~~~~~~~~~~~~~ 400 (718)
T PLN02418 322 LLDVADALEANEELIKAENELDVAAAQEAGYEKSLVSRLTLKPGKIASLAASIRQLADME-DPIGRVLKRTEVADGLVLE 400 (718)
T ss_pred HHHHHHHHHHhHHHHHHHHHHhHHHHHHhCCchhHHHHHhccHHHHHHHHHHHHHHhcCc-cccCccccccccCCCceEE
Confidence 5789999999999999996 77999 8877643 459999999999999873 33444433 11233367
Q ss_pred eeecCCceEEEEcCCccchHHHHHhHHHHHhhCCeEEeecCCCChHHHHHHHHHHHHcCCCCCc----EEEEeCCchhhH
Q 015042 67 TLREPVGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLTALYYAHLAKLAGIPDGV----LNVVPGFGPTAG 142 (414)
Q Consensus 67 ~~~~P~Gvv~~i~p~n~P~~~~~~~~~~aLaaGN~vv~kps~~~~~~~~~l~~~l~~aG~p~g~----v~~v~~~~~~~~ 142 (414)
.+++|+|||++|+||| |+... +++++||++||+||+|||+.+|.++..+++++.++ +|+|+ +|++++ +.+.+
T Consensus 401 ~~r~PlGVV~~I~Pwn-P~~~~-~kiapALaaGNtVVlKPse~tp~s~~~l~~l~~eA-lP~gv~~~v~nvv~g-~~~~g 476 (718)
T PLN02418 401 KTSCPLGVLLIIFESR-PDALV-QIASLAIRSGNGLLLKGGKEAARSNAILHKVITDA-IPKTVGGKLIGLVTS-RDEIP 476 (718)
T ss_pred EEEEeeeEEEEEeCCC-cHHHH-HHHHHHHHhCCEEEEeCCccchHHHHHHHHHHHHH-ccccCCcceEEEeCC-cHHHH
Confidence 8899999999999999 99999 89999999999999999999999999999999999 99996 999997 56789
Q ss_pred HHhhhCCCccEEEEeCCcHHHHHHHHHHHhcccceeEEEcCCCCCceEcCCCCHHHHHHHHHHHhhccCCCCcccCceEE
Q 015042 143 AAICSHMDIDYVCFTGSTDVGRLVMQAAAASNLKQVSLELGGKSPLLIFDDADLDTAADVALLGNLYNKGEICVASSRVF 222 (414)
Q Consensus 143 ~~l~~~~~v~~v~~tGs~~~g~~i~~~~a~~~~~~~~~e~gg~~~~iV~~dadl~~aa~~i~~~~~~~~Gq~C~a~~~i~ 222 (414)
+.|..||+||+|+||||+..+ .+.++ .+++|+++|+|||||+||++|||++.|++.+++++|.| ||.|++.+|+|
T Consensus 477 ~~L~~~~~v~~V~FTGSt~~i---~~~aa-~~~k~v~lELGGk~p~iV~~DADld~A~~~i~~~~~~n-GQ~C~a~~Rll 551 (718)
T PLN02418 477 DLLKLDDVIDLVIPRGSNKLV---SQIKA-STKIPVLGHADGICHVYVDKSADMDMAKRIVVDAKTDY-PAACNAMETLL 551 (718)
T ss_pred HHHhhCCCCCEEEEeCCHHHH---HHHHH-hcCCCEEEeCCCcceEEEeCCCCHHHHHHHHHHHhCCC-CCccccCcEEE
Confidence 999999999999999999644 44444 56899999999999999999999999999999999999 99999999999
Q ss_pred EeCchHHHHHHHHHHHHhhcccCCCCCCCCcccccCCHHHHHHHHHHHHHHHHcCCEEEeCCcccCCCCceeeeEEEeeC
Q 015042 223 VQEGIYDKFEKKLLEKAKAWLVGDPFDPTVRQGPQISERHFDRILSYIEHGKREGATLLTGGKPIGDKGYYIEPTIFTNV 302 (414)
Q Consensus 223 V~~~i~d~f~~~l~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~~~g~~~~Ptvl~~~ 302 (414)
||+++||+ | .+.+++++++++|+++ +||.... | ++. +
T Consensus 552 Vh~~i~d~------------------------G---------~~~~~i~~a~~~Ga~l-~Gg~~~~--g------~l~-~ 588 (718)
T PLN02418 552 VHKDLVQN------------------------G---------GLNDLLVALRSAGVTL-YGGPRAS--K------LLN-I 588 (718)
T ss_pred Eecccccc------------------------c---------cHHHHHHHHHHCCCEE-ECCcccc--C------eeC-C
Confidence 99999997 1 2578999999999999 6875431 3 343 3
Q ss_pred CCcccccccceecceEEEEeeCCHHHHHHHhhcCCCCceEEEecCCHHHHHHHHHhcceeEEEEcCcCCCCCCCCcccCC
Q 015042 303 KEDMIIAKEEIFGPVMALMKFKTVEEAIKSANNTQYGLAAGIVTKDLNVANTVSRSIRAGIIWINCYFGFSMDCPYGGYK 382 (414)
Q Consensus 303 ~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~sv~s~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~p~gG~~ 382 (414)
++|.+++||+||||++|++|+|.||||+++|+++|||+++|||+|.+.++++++++++|.||||++....+..||||+|
T Consensus 589 -~~~~i~~eE~FgPv~~i~~~~~~dEAI~~aN~s~yGLsa~V~T~d~~~a~~~a~~l~aG~V~IN~~~~~~~~~PfGG~k 667 (718)
T PLN02418 589 -PEAQSFHHEYSSLACTVEIVDDVHAAIDHIHRHGSAHTDCIVTEDSEVAEIFLRQVDSAAVFHNASTRFSDGARFGLGA 667 (718)
T ss_pred -CCchhhhCCcCCeeEEEEEECCHHHHHHHHhcCCCCCeeEEEcCCHHHHHHHHHhCCeeEEEEeCCCCCCCCCCCCCcc
Confidence 7899999999999999999999999999999999999999999999999999999999999999987766778999999
Q ss_pred CCCC--Cccc--hHHHHHhhheeeEEEeeC
Q 015042 383 MSGF--GREY--GLESLYKYLQIKSVVTPI 408 (414)
Q Consensus 383 ~sG~--g~~~--g~~~~~~~~~~k~i~~~~ 408 (414)
+||+ |+++ |++|+++||+.|+|++..
T Consensus 668 ~SG~stGr~~~~G~~gl~~~t~~K~v~~g~ 697 (718)
T PLN02418 668 EVGISTGRIHARGPVGVEGLLTTRWILRGN 697 (718)
T ss_pred cccccCCcCCCCCHHHHHHHhcEEEEEECC
Confidence 9999 9875 999999999999997654
|
|
| >PRK13805 bifunctional acetaldehyde-CoA/alcohol dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.1e-68 Score=573.76 Aligned_cols=390 Identities=21% Similarity=0.256 Sum_probs=334.5
Q ss_pred CHHHHHHHHHhHHHHHHHHHHhcCCChHHHhhchHHHHHHHHHHHHHhhhhhcCcccccCCCcccceeecCCceEEEEcC
Q 015042 1 MWKFADLIEEHVEELAALDALDAGKVYLRAKTAEIPGAAEFLRFFAGAADKIHGEVLKMSSELQGYTLREPVGVVGHIIP 80 (414)
Q Consensus 1 L~~~a~~l~~~~~~l~~~~~~etGk~~~e~~~~ei~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p 80 (414)
|+++++.|++|+++|++++++|+|||..+++..++..+++.++++.. .++..+. +..+.....+.+++|+|||++|+|
T Consensus 40 l~~~a~~l~~~~~~la~~~~~EtGk~~~e~~~~~~~~~~~~~~~~~~-~~~~~g~-~~~~~~~~~~~~~~P~GVv~~I~p 117 (862)
T PRK13805 40 VRAAALAALDARIPLAKMAVEETGRGVVEDKVIKNHFASEYIYNSYK-DEKTVGV-IEEDDEFGIIEIAEPVGVIAGITP 117 (862)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHCCChHHHHHHHHHHHHHHHHHHhc-CCCcccc-cCcCCCCCeEEEeecceEEEEEeC
Confidence 57899999999999999999999999987654345444454544432 1122222 222234456788999999999999
Q ss_pred CccchHHHHHhHHHHHhhCCeEEeecCCCChHHHHHHHHHH----HHcCCCCCcEEEEeCCchhhHHHhhhCCCccEEEE
Q 015042 81 WNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLTALYYAHLA----KLAGIPDGVLNVVPGFGPTAGAAICSHMDIDYVCF 156 (414)
Q Consensus 81 ~n~P~~~~~~~~~~aLaaGN~vv~kps~~~~~~~~~l~~~l----~~aG~p~g~v~~v~~~~~~~~~~l~~~~~v~~v~~ 156 (414)
||||+.+.++++++||++||+||+|||+.+|.++..+.+++ .++|+|+|+|+++++.+.+.++.|+.|++||+|+|
T Consensus 118 wn~P~~~~~~~~~~ALaaGN~vVlKps~~a~~t~~~~~~l~~~~l~~aG~p~g~v~vv~g~~~~~~~~L~~~~~vd~I~f 197 (862)
T PRK13805 118 TTNPTSTAIFKALIALKTRNPIIFSFHPRAQKSSIAAAKIVLDAAVAAGAPKDIIQWIEEPSVELTNALMNHPGIALILA 197 (862)
T ss_pred CCChhHHHHHHHHHHHHhCCcEEEECCcchHHHHHHHHHHHHHHHHHcCcCcccEEEecCCCHHHHHHHHcCCCccEEEe
Confidence 99999999999999999999999999999999999888886 46899999999999877788999999999999999
Q ss_pred eCCcHHHHHHHHHHHhcccceeEEEcCCCCCceEcCCCCHHHHHHHHHHHhhccCCCCcccCceEEEeCchHHHHHHHHH
Q 015042 157 TGSTDVGRLVMQAAAASNLKQVSLELGGKSPLLIFDDADLDTAADVALLGNLYNKGEICVASSRVFVQEGIYDKFEKKLL 236 (414)
Q Consensus 157 tGs~~~g~~i~~~~a~~~~~~~~~e~gg~~~~iV~~dadl~~aa~~i~~~~~~~~Gq~C~a~~~i~V~~~i~d~f~~~l~ 236 (414)
|||+.++ +.++ .+++|+++|+|||+|+||++|||++.|++.|++++|+|+||.|+++++||||++++|+|+++|+
T Consensus 198 TGs~~v~----~~a~-~~~~pv~~e~gGk~p~iV~~dADl~~Aa~~i~~~k~~n~GQ~C~a~~~v~V~~~i~d~f~~~l~ 272 (862)
T PRK13805 198 TGGPGMV----KAAY-SSGKPALGVGAGNVPAYIDKTADIKRAVNDILLSKTFDNGMICASEQAVIVDDEIYDEVKEEFA 272 (862)
T ss_pred cCCHHHH----HHHH-hcCCCeEEECCCCCeEEEeCCCCHHHHHHHHHHhhhccCCCccCCCceEEEehhhHHHHHHHHH
Confidence 9999864 3444 7889999999999999999999999999999999999999999999999999999999999998
Q ss_pred HHHhhcccCCCCCCCCcccccCCHHHHHHHHHHHHHHHHcCCEE-EeCCccc---CCCCceeeeEE------EeeCCCcc
Q 015042 237 EKAKAWLVGDPFDPTVRQGPQISERHFDRILSYIEHGKREGATL-LTGGKPI---GDKGYYIEPTI------FTNVKEDM 306 (414)
Q Consensus 237 ~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ga~v-~~gg~~~---~~~g~~~~Ptv------l~~~~~~~ 306 (414)
++. +|+++..++++++++++++...+.+. ++||... ...|++++||+ +.+++++|
T Consensus 273 ~~g---------------~~l~~~~~~~~v~~~i~~a~~~~~~~~~~g~~~~~~~~~~G~~~~p~~~~~i~~l~~v~~~~ 337 (862)
T PRK13805 273 SHG---------------AYFLNKKELKKLEKFIFGKENGALNADIVGQSAYKIAEMAGFKVPEDTKILIAEVKGVGESE 337 (862)
T ss_pred HhC---------------CeeCCHHHHHHHHHHHhhccCCCcCccccCCCHHHHHHHcCCCCCCCCeEEEEecCCCCCCC
Confidence 852 58999999999999999887655432 4565421 12488899997 66788999
Q ss_pred cccccceecceEEEEeeCCHHHHHHHhhc----CCCCceEEEecCCHHHHHHHHHhcceeEEEEcCcC----------CC
Q 015042 307 IIAKEEIFGPVMALMKFKTVEEAIKSANN----TQYGLAAGIVTKDLNVANTVSRSIRAGIIWINCYF----------GF 372 (414)
Q Consensus 307 ~~~~~E~fgPvl~v~~~~~~~eai~~~n~----~~~gl~~sv~s~d~~~~~~~~~~l~~g~v~iN~~~----------~~ 372 (414)
++++ |.||||++|++|+|++|||+++|+ .++||+++|||+|.+.++++++++++|+|+||.+. .+
T Consensus 338 ~~~~-E~fgPVl~v~~~~~~deAi~~~n~~~~~~~~gl~~~i~t~d~~~~~~~~~~l~~g~v~vN~~~~~~~~~~~~~~~ 416 (862)
T PRK13805 338 PLSH-EKLSPVLAMYKAKDFEDAVEKAEKLVEFGGLGHTAVIYTNDDELIKEFGLRMKACRILVNTPSSQGGIGDLYNKL 416 (862)
T ss_pred cchh-cccCcEEEEEEECCHHHHHHHHHHHHhcCCCCcEEEEECCCHHHHHHHHhhCCccEEEEeCCccccccccccCCc
Confidence 9887 799999999999999999999988 47999999999999999999999999999999886 36
Q ss_pred CCCCCcccCCCCCCCccchHHHHHhhheeeEEEeeCCCCCCC
Q 015042 373 SMDCPYGGYKMSGFGREYGLESLYKYLQIKSVVTPIYNSPWL 414 (414)
Q Consensus 373 ~~~~p~gG~~~sG~g~~~g~~~~~~~~~~k~i~~~~~~~~~~ 414 (414)
.+.+|||| |.||+|+++|+.|+++|++.|+|..+...--||
T Consensus 417 ~~~~~fG~-G~~g~~~~~g~~g~~~~~~~k~v~~~~~~~~~~ 457 (862)
T PRK13805 417 APSLTLGC-GSWGGNSVSENVGAKHLLNIKTVAKRRENMQWF 457 (862)
T ss_pred Cccccccc-cCCCCCcCCCCCCHHHhheeeeeeeccccceee
Confidence 78899997 999999999999999999999998765443443
|
|
| >cd06534 ALDH-SF NAD(P)+-dependent aldehyde dehydrogenase superfamily | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.1e-66 Score=508.76 Aligned_cols=343 Identities=51% Similarity=0.791 Sum_probs=321.3
Q ss_pred CHHHHHHHHHhHHHHHHHHHHhcCCChHHHhhchHHHHHHHHHHHHHhhhhhcCccc-ccCCCcccceeecCCceEEEEc
Q 015042 1 MWKFADLIEEHVEELAALDALDAGKVYLRAKTAEIPGAAEFLRFFAGAADKIHGEVL-KMSSELQGYTLREPVGVVGHII 79 (414)
Q Consensus 1 L~~~a~~l~~~~~~l~~~~~~etGk~~~e~~~~ei~~~~~~l~~~a~~~~~~~~~~~-~~~~~~~~~~~~~P~Gvv~~i~ 79 (414)
|+++++.|.++.++|++++++|+|||..+ ...|+..+++.+++++...++..+... ....+...+.+++|+|||++|+
T Consensus 22 l~~l~~~l~~~~~~l~~~~~~e~Gk~~~~-~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~Gvv~~i~ 100 (367)
T cd06534 22 LRKIADLLEERREELAALETLETGKPIEE-ALGEVARAIDTFRYAAGLADKLGGPELPSPDPGGEAYVRREPLGVVGVIT 100 (367)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHcCCCHHH-HHHHHHHHHHHHHHHHHHHHHhcCCcccccCCCceeEEEEEeeeEEEEEC
Confidence 57899999999999999999999999986 456999999999999988876644222 2234667889999999999999
Q ss_pred CCccchHHHHHhHHHHHhhCCeEEeecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhhHHHhhhCCCccEEEEeCC
Q 015042 80 PWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLTALYYAHLAKLAGIPDGVLNVVPGFGPTAGAAICSHMDIDYVCFTGS 159 (414)
Q Consensus 80 p~n~P~~~~~~~~~~aLaaGN~vv~kps~~~~~~~~~l~~~l~~aG~p~g~v~~v~~~~~~~~~~l~~~~~v~~v~~tGs 159 (414)
|||+|+...++.+++||++||+||+|||+.+|.++..+.++|.++|+|+++++++++++.+..+.|+.|+++|.|.||||
T Consensus 101 p~n~p~~~~~~~~~~aL~~GN~vilk~s~~~~~~~~~l~~~l~~ag~p~~~v~~~~~~~~~~~~~l~~~~~vd~v~~tGs 180 (367)
T cd06534 101 PWNFPLLLAAWKLAPALAAGNTVVLKPSELTPLTALALAELLQEAGLPPGVVNVVPGGGDEVGAALLSHPRVDKISFTGS 180 (367)
T ss_pred CCchHHHHHHHHHHHHHHcCCEEEEECCCcchHHHHHHHHHHHhcCCCcCeEEEEEcCchhHHHHHhcCCCcCEEEEECC
Confidence 99999999999999999999999999999999999999999999999999999999977678899999999999999999
Q ss_pred cHHHHHHHHHHHhcccceeEEEcCCCCCceEcCCCCHHHHHHHHHHHhhccCCCCcccCceEEEeCchHHHHHHHHHHHH
Q 015042 160 TDVGRLVMQAAAASNLKQVSLELGGKSPLLIFDDADLDTAADVALLGNLYNKGEICVASSRVFVQEGIYDKFEKKLLEKA 239 (414)
Q Consensus 160 ~~~g~~i~~~~a~~~~~~~~~e~gg~~~~iV~~dadl~~aa~~i~~~~~~~~Gq~C~a~~~i~V~~~i~d~f~~~l~~~~ 239 (414)
+++++.|.+.++ ++++|+++|+||+|++||++|+|++.|++.+++++|.++||.|+++++||||++++|+|+++|+
T Consensus 181 ~~~~~~v~~~~~-~~~~~~~~e~~g~~~~iV~~~ad~~~aa~~i~~~~~~~~gq~C~s~~~v~v~~~~~~~f~~~l~--- 256 (367)
T cd06534 181 TAVGKAIMKAAA-ENLKPVTLELGGKSPVIVDEDADLDAAVEGAVFGAFFNAGQICTAASRLLVHESIYDEFVEKLV--- 256 (367)
T ss_pred HHHHHHHHHHHh-cCCCeEEEEcCCCCeEEECCCCCHHHHHHHHHHHHHhcCCCCCCCCcEEEEcHHHHHHHHHhhc---
Confidence 999999999988 7789999999999999999999999999999999999999999999999999999999999997
Q ss_pred hhcccCCCCCCCCcccccCCHHHHHHHHHHHHHHHHcCCEEEeCCcccCCCCceeeeEEEeeCCCcccccccceecceEE
Q 015042 240 KAWLVGDPFDPTVRQGPQISERHFDRILSYIEHGKREGATLLTGGKPIGDKGYYIEPTIFTNVKEDMIIAKEEIFGPVMA 319 (414)
Q Consensus 240 ~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~ 319 (414)
||+.+++++++++++|+||||++
T Consensus 257 ---------------------------------------------------------tl~~~~~~~~~~~~~E~fgPv~~ 279 (367)
T cd06534 257 ---------------------------------------------------------TVLVDVDPDMPIAQEEIFGPVLP 279 (367)
T ss_pred ---------------------------------------------------------eeeeCCCCCCccccCCccCceEE
Confidence 67777788899999999999999
Q ss_pred EEeeCCHHHHHHHhhcCCCCceEEEecCCHHHHHHHHHhcceeEEEEcCcCCC-CCCCCcccCCCCCCCccchHHHHHhh
Q 015042 320 LMKFKTVEEAIKSANNTQYGLAAGIVTKDLNVANTVSRSIRAGIIWINCYFGF-SMDCPYGGYKMSGFGREYGLESLYKY 398 (414)
Q Consensus 320 v~~~~~~~eai~~~n~~~~gl~~sv~s~d~~~~~~~~~~l~~g~v~iN~~~~~-~~~~p~gG~~~sG~g~~~g~~~~~~~ 398 (414)
|++|++.+||++++|++++||++||||+|.+.++++++++++|+|+||+++.. .+..||||.|.||+|+++|++++++|
T Consensus 280 v~~~~~~~eai~~~n~~~~gl~~~i~t~d~~~~~~~~~~~~~g~v~iN~~~~~~~~~~pfgg~~~sG~g~~~g~~~~~~~ 359 (367)
T cd06534 280 VIRFKDEEEAIALANDTEYGLTAGVFTRDLNRALRVAERLRAGTVYINDSSIGVGPEAPFGGVKNSGIGREGGPYGLEEY 359 (367)
T ss_pred EEecCCHHHHHHHHhCCCCCCeEEEECCCHHHHHHHHHhCCcceEEECCCCCCCCCCCCCCCcccCccCCCChHHHHHHh
Confidence 99999999999999999999999999999999999999999999999998876 78899999999999999999999999
Q ss_pred heeeEEE
Q 015042 399 LQIKSVV 405 (414)
Q Consensus 399 ~~~k~i~ 405 (414)
|++|+|.
T Consensus 360 ~~~k~i~ 366 (367)
T cd06534 360 TRTKTVV 366 (367)
T ss_pred ceEEEEe
Confidence 9999874
|
The aldehyde dehydrogenase superfamily (ALDH-SF) of NAD(P)+-dependent enzymes, in general, oxidize a wide range of endogenous and exogenous aliphatic and aromatic aldehydes to their corresponding carboxylic acids and play an important role in detoxification. Besides aldehyde detoxification, many ALDH isozymes possess multiple additional catalytic and non-catalytic functions such as participating in metabolic pathways, or as binding proteins, or osmoregulants, to mention a few. The enzyme has three domains, a NAD(P)+ cofactor-binding domain, a catalytic domain, and a bridging domain; and the active enzyme is generally either homodimeric or homotetrameric. The catalytic mechanism is proposed to involve cofactor binding, resulting in a conformational change and activation of an invariant catalytic cysteine nucleophile. The cysteine and aldehyde substrate form an oxyanion thiohemiacetal intermediate resulting in hydri |
| >cd07077 ALDH-like NAD(P)+-dependent aldehyde dehydrogenase-like (ALDH-like) family | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.8e-67 Score=519.25 Aligned_cols=353 Identities=18% Similarity=0.172 Sum_probs=314.8
Q ss_pred CHHHHHHHHHhHHHHHHHHHHhcCCChHHHh----------hchHHHHHHHHHHHHHhhhhhcCcccccCCCcccceeec
Q 015042 1 MWKFADLIEEHVEELAALDALDAGKVYLRAK----------TAEIPGAAEFLRFFAGAADKIHGEVLKMSSELQGYTLRE 70 (414)
Q Consensus 1 L~~~a~~l~~~~~~l~~~~~~etGk~~~e~~----------~~ei~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~ 70 (414)
|+++++.|++|+++|+++++.|+||++.+.. ..|+..+++.+++++....+..+...+. ....+++++
T Consensus 22 L~~~a~~l~~~~~~la~~~~~e~gk~~~~~~~~~~~~~~~~~~ev~~~~~~~~~~a~~~~~~~~~~~~~--~~~~~~~~~ 99 (397)
T cd07077 22 INAIANALYDTRQRLASEAVSERGAYIRSLIANWIAMMGCSESKLYKNIDTERGITASVGHIQDVLLPD--NGETYVRAF 99 (397)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhhcccHHHHHHhCCcHHHHHHHHHHHHHHHHhcCcccceEecC--CCceEEEEe
Confidence 5789999999999999999999999865322 1388999999999887655443332221 235789999
Q ss_pred CCceEEEEcCCccchHHHHHhHHHHHhhCCeEEeecCCCChHHHHHHHHHHHHc---CCCCCcEEEEeCCchhhHHHhhh
Q 015042 71 PVGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLTALYYAHLAKLA---GIPDGVLNVVPGFGPTAGAAICS 147 (414)
Q Consensus 71 P~Gvv~~i~p~n~P~~~~~~~~~~aLaaGN~vv~kps~~~~~~~~~l~~~l~~a---G~p~g~v~~v~~~~~~~~~~l~~ 147 (414)
|+|||++|+|||||+. .++++++||++||+||+|||+.+|.++..+.+++.++ |+|+++++++++.+.+.++.|+.
T Consensus 100 P~Gvv~~i~p~N~P~~-~~~~~~~aL~aGN~vilKps~~~p~~~~~l~~~~~~~~~~g~p~~~v~~v~~~~~~~~~~l~~ 178 (397)
T cd07077 100 PIGVTMHILPSTNPLS-GITSALRGIATRNQCIFRPHPSAPFTNRALALLFQAADAAHGPKILVLYVPHPSDELAEELLS 178 (397)
T ss_pred cceEEEEEeCCCCchH-HHHHHHHHHHcCCcEEEEcCcchhhHHHHHHHHHHHHhhcCCCCceEEEecCCCHHHHHHHHc
Confidence 9999999999999999 9999999999999999999999999999999999887 99999999999877788999999
Q ss_pred CCCccEEEEeCCcHHHHHHHHHHHhcccceeEEEcCCCCCceEcCCCCHHHHHHHHHHHhhccCCCCcccCceEEEeCch
Q 015042 148 HMDIDYVCFTGSTDVGRLVMQAAAASNLKQVSLELGGKSPLLIFDDADLDTAADVALLGNLYNKGEICVASSRVFVQEGI 227 (414)
Q Consensus 148 ~~~v~~v~~tGs~~~g~~i~~~~a~~~~~~~~~e~gg~~~~iV~~dadl~~aa~~i~~~~~~~~Gq~C~a~~~i~V~~~i 227 (414)
||++|+|+||||+.+++.+.+.+. .+|++.|+||++++||++|||++.|++.+++++|.| ||.|+++++||||+++
T Consensus 179 ~~~vd~v~ftGs~~~~~~v~~~~~---~~~~~~~~gg~~~~iv~~dad~~~a~~~~~~~~~~~-GQ~C~a~~~v~V~~~i 254 (397)
T cd07077 179 HPKIDLIVATGGRDAVDAAVKHSP---HIPVIGFGAGNSPVVVDETADEERASGSVHDSKFFD-QNACASEQNLYVVDDV 254 (397)
T ss_pred CCCCCEEEecCCHHHHHHHHHcCC---CCceEEecCCcceEEEcCCCCHHHHHHHHHHhhccC-CccCCCCeEEEEehhh
Confidence 999999999999999999987652 689999999999999999999999999999999999 9999999999999999
Q ss_pred HHHHHHHHHHHHhhcccCCCCCCCCcccccCCHHHHHHHHHHHHHHHHcCCEEEeCCcccCCCCceeeeEEEeeCCCccc
Q 015042 228 YDKFEKKLLEKAKAWLVGDPFDPTVRQGPQISERHFDRILSYIEHGKREGATLLTGGKPIGDKGYYIEPTIFTNVKEDMI 307 (414)
Q Consensus 228 ~d~f~~~l~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~ 307 (414)
||+|+++|+++++. .|++++.||. ++|+.|| ++|.
T Consensus 255 ~d~~~~~l~~~~~~----------------------------------~G~~~~~g~~-----~~~~~pt------~~~~ 289 (397)
T cd07077 255 LDPLYEEFKLKLVV----------------------------------EGLKVPQETK-----PLSKETT------PSFD 289 (397)
T ss_pred hHHHHHHHHHHHHh----------------------------------cCcCcCCCce-----eeEEecc------CCCC
Confidence 99999999998864 3566666652 3577776 7889
Q ss_pred ccccceecceEEEEeeCCHH----HHHHHhhcCCCCceEEEecCCHHHHHHHHHhcceeEEEEcCcCCCC--CCCCcccC
Q 015042 308 IAKEEIFGPVMALMKFKTVE----EAIKSANNTQYGLAAGIVTKDLNVANTVSRSIRAGIIWINCYFGFS--MDCPYGGY 381 (414)
Q Consensus 308 ~~~~E~fgPvl~v~~~~~~~----eai~~~n~~~~gl~~sv~s~d~~~~~~~~~~l~~g~v~iN~~~~~~--~~~p~gG~ 381 (414)
+.++|+||||++|++|+|++ +|++++|+++|||+++|||+|.+.++++++++++|.|+||++.... ..+||||.
T Consensus 290 ~~~~E~FgPvl~v~~~~~~~eai~~ai~~~n~~~~gl~~~Ift~d~~~~~~~~~~l~~G~v~vN~~~~~~~~~~~~~gg~ 369 (397)
T cd07077 290 DEALESMTPLECQFRVLDVISAVENAWMIIESGGGPHTRCVYTHKINKVDDFVQYIDTASFYPNESSKKGRGAFAGKGVE 369 (397)
T ss_pred hhhhhhhCceeEEEEEcchHHHHHHHHHHHHhcCCCCceEEEeCCHHHHHHHHHhCCEEEEEEeCCccCCCccccCCCcc
Confidence 99999999999999999996 6667889999999999999999999999999999999999987654 66899999
Q ss_pred C--CCCCCccch-HHHHHhhheeeEEE
Q 015042 382 K--MSGFGREYG-LESLYKYLQIKSVV 405 (414)
Q Consensus 382 ~--~sG~g~~~g-~~~~~~~~~~k~i~ 405 (414)
| .||+|+++| .+++++|++.|+|+
T Consensus 370 ~~~~SG~g~~~g~~~~~~~~~~~k~v~ 396 (397)
T cd07077 370 RIVTSGMNNIFGAGVGHDALRPLKRLV 396 (397)
T ss_pred eEEEccccCCCCCCCChHHhcceeEee
Confidence 9 899999999 99999999999975
|
The aldehyde dehydrogenase-like (ALDH-like) group of the ALDH superfamily of NAD(P)+-dependent enzymes which, in general, oxidize a wide range of endogenous and exogenous aliphatic and aromatic aldehydes to their corresponding carboxylic acids and play an important role in detoxification. This group includes families ALDH18, ALDH19, and ALDH20 and represents such proteins as gamma-glutamyl phosphate reductase, LuxC-like acyl-CoA reductase, and coenzyme A acylating aldehyde dehydrogenase. All of these proteins have a conserved cysteine that aligns with the catalytic cysteine of the ALDH group. |
| >TIGR00407 proA gamma-glutamyl phosphate reductase | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.5e-65 Score=503.52 Aligned_cols=356 Identities=19% Similarity=0.176 Sum_probs=300.7
Q ss_pred CHHHHHHHHHhHHHHHHH------HHHhcCCCh--HH---HhhchHHHHHHHHHHHHHhhhhhcCccccc---CCCcccc
Q 015042 1 MWKFADLIEEHVEELAAL------DALDAGKVY--LR---AKTAEIPGAAEFLRFFAGAADKIHGEVLKM---SSELQGY 66 (414)
Q Consensus 1 L~~~a~~l~~~~~~l~~~------~~~etGk~~--~e---~~~~ei~~~~~~l~~~a~~~~~~~~~~~~~---~~~~~~~ 66 (414)
|+++++.|++|+++|+++ +++|+|||. .+ ....|+..+++.+++++..++.. +..++. ..+...+
T Consensus 20 L~~~a~~l~~~~~~la~~~~~d~a~~~E~Gk~~~~~~~l~~a~~ev~~~~~~~~~~a~~a~~~-g~~~~~~~~~~~~~~~ 98 (398)
T TIGR00407 20 LSKIADGLEAQAPAILAANAKDIAVAKENGLADALLDRLLLTEGRLKGIADGVKDVIELADPV-GKVIDGRELDSGLTLE 98 (398)
T ss_pred HHHHHHHHHhChHHHHHHhHHHHHHHHHcCCCHHHHHHHcCCHHHHHHHHHHHHHHhcCCCCC-cccccceecCCCceEE
Confidence 578999999999999999 999999993 22 13458999999999999888653 443332 2345678
Q ss_pred eeecCCceEEEEcCCccchHHHHHhHHHHHhhCCeEEeecCCCChHHHHHHHHH----HHHcCCCCCcEEEEeCCc-hhh
Q 015042 67 TLREPVGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLTALYYAHL----AKLAGIPDGVLNVVPGFG-PTA 141 (414)
Q Consensus 67 ~~~~P~Gvv~~i~p~n~P~~~~~~~~~~aLaaGN~vv~kps~~~~~~~~~l~~~----l~~aG~p~g~v~~v~~~~-~~~ 141 (414)
.+++|+|||++|+||| | ...++++++||++||+||+|||+.+|.++..+.++ |.++|+|+|++|++++.+ .+.
T Consensus 99 ~~~~PlGVV~~I~pw~-p-~~~~~~~~~ALaaGN~vVlKps~~tp~~~~~l~~~~~~al~eaGlP~gvv~~v~g~~~~~~ 176 (398)
T TIGR00407 99 RVRVPLGVLGVIYEAR-P-NVTVDIASLCLKTGNAVILRGGKEAVRSNKALVEVIQDALAQTGLPVGAVQLIETPSRELV 176 (398)
T ss_pred EEEeCcEEEEEEeCCC-c-hHHHHHHHHHHHhCCeEEECCChhhHHHHHHHHHHHHHHHHHcCCChhHEEEecCCCHHHH
Confidence 8999999999999997 6 66888999999999999999999999999999999 569999999999999744 457
Q ss_pred HHHhhhCCCccEEEEeCCcHHHHHHHHHHHhcccceeEEEcCCCCCceEcCCCCHHHHHHHHHHHhhccCCCCcccCceE
Q 015042 142 GAAICSHMDIDYVCFTGSTDVGRLVMQAAAASNLKQVSLELGGKSPLLIFDDADLDTAADVALLGNLYNKGEICVASSRV 221 (414)
Q Consensus 142 ~~~l~~~~~v~~v~~tGs~~~g~~i~~~~a~~~~~~~~~e~gg~~~~iV~~dadl~~aa~~i~~~~~~~~Gq~C~a~~~i 221 (414)
++.|..||+||+|+||||+.+++.+++. ..+|+++|+|||||+||++|||++.|++.+++++|. +||.|++++|+
T Consensus 177 ~~~l~~~~~v~~v~fTGs~~vg~~~~~~----~~~~~~~e~gGk~p~iV~~dADl~~Aa~~iv~~~~~-~GQ~C~a~~rv 251 (398)
T TIGR00407 177 SELLDLDEYIDLLIPRGGNGLVRLIKQT----STIPVLGHGDGICHIYLDESADLIKAIKVIVNAKTQ-RPSTCNAIETL 251 (398)
T ss_pred HHHHhCCCCeeEEEecCCHHHHHHHHHh----CCCCEEEecCCcceEEEeCCCCHHHHHHHHHhhhcC-CCCcccccceE
Confidence 8899999999999999999999988764 347999999999999999999999999999999996 59999999999
Q ss_pred EEeCchHHHHHHHHHHHHhhcccCCCCCCCCcccccCCHHHHHHHHHHHHHHHHcCCEEEeCCcccCCCCceeeeEEEee
Q 015042 222 FVQEGIYDKFEKKLLEKAKAWLVGDPFDPTVRQGPQISERHFDRILSYIEHGKREGATLLTGGKPIGDKGYYIEPTIFTN 301 (414)
Q Consensus 222 ~V~~~i~d~f~~~l~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~~~g~~~~Ptvl~~ 301 (414)
|||+++||+|+++|++.++++.+ .+++ .+.+.+++.. | .||++
T Consensus 252 ~V~~~v~d~f~~~l~~~~~~~~~--------~~~~------~~~i~~~v~~----g-----------------~~tv~-- 294 (398)
T TIGR00407 252 LVNKAIAREFLPVLENQLLEKGV--------TIHA------DAYALKLLEL----G-----------------PATEA-- 294 (398)
T ss_pred EEeHHHHHHHHHHHHHHHHhcCC--------EEec------CHHHHHHHhc----c-----------------Ccccc--
Confidence 99999999999999999987643 1221 1334444321 1 13554
Q ss_pred CCCcccccccceecceEEEEeeCCHHHHHHHhhcCCCCceEEEecCCHHHHHHHHHhcceeEEEEcCcCCCCCCCCcccC
Q 015042 302 VKEDMIIAKEEIFGPVMALMKFKTVEEAIKSANNTQYGLAAGIVTKDLNVANTVSRSIRAGIIWINCYFGFSMDCPYGGY 381 (414)
Q Consensus 302 ~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~sv~s~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~p~gG~ 381 (414)
+.++.+++||+||||++|++|+|++||++++|+++|||++||||+|.+.++++++++++|.|+||++....+..|||=-
T Consensus 295 -~~~~~i~~eE~FgPvl~v~~~~~~~eAi~~aN~~~~GL~a~I~t~d~~~a~~~a~~i~~G~v~iN~~~~~~~~~pfG~~ 373 (398)
T TIGR00407 295 -IVCKTDFDKEFLSLDLSVKIVESLEAAIQHINQYGTQHSDAILTENKANAEQFQNGVDSAAVYHNASTRFTDGFRFGFG 373 (398)
T ss_pred -ccccccccchhhCceeEEEEECCHHHHHHHHHHhCCCCceEEEeCCHHHHHHHHHhCCeeEEEEeCCCCcCCCcccccc
Confidence 2337899999999999999999999999999999999999999999999999999999999999999887777899711
Q ss_pred CC----CCCCccchHHHHHhhheee
Q 015042 382 KM----SGFGREYGLESLYKYLQIK 402 (414)
Q Consensus 382 ~~----sG~g~~~g~~~~~~~~~~k 402 (414)
.. ++-....|+.+++.||..|
T Consensus 374 ~~~~~~~~~~~~rg~~~~~~~~~~~ 398 (398)
T TIGR00407 374 AEVGISTQKLHARGPMGLEALTSYK 398 (398)
T ss_pred eeeEEecCCCcCCCCcCHHHhcCCC
Confidence 22 1234577999999999875
|
The prosite motif begins at residue 332 of the seed alignment although not all of the members of the family exactly obey the motif. |
| >COG4230 Delta 1-pyrroline-5-carboxylate dehydrogenase [Energy production and conversion] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.1e-65 Score=491.00 Aligned_cols=390 Identities=31% Similarity=0.486 Sum_probs=354.9
Q ss_pred CHHHHHHHHHhHHHHHHHHHHhcCCChHHHhhchHHHHHHHHHHHHHhhhhhcCcccccCCCcccceeecCCceEEEEcC
Q 015042 1 MWKFADLIEEHVEELAALDALDAGKVYLRAKTAEIPGAAEFLRFFAGAADKIHGEVLKMSSELQGYTLREPVGVVGHIIP 80 (414)
Q Consensus 1 L~~~a~~l~~~~~~l~~~~~~etGk~~~e~~~~ei~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p 80 (414)
|++++++++.+..+|..++++|.||+... ...|+.+++++||||+.+++.-.++ ...+|+|.+++|+|
T Consensus 178 L~raAdlme~~m~~L~~L~~REAGKtl~n-aIAEVREAVDFlrYYA~~ar~~~g~-----------~~~~~~G~vVcISP 245 (769)
T COG4230 178 LERAADLMEAQMPQLMGLLVREAGKTLSN-AIAEVREAVDFLRYYAGQARDTFGN-----------LTHRPLGPVVCISP 245 (769)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhccchhh-HHHHHHHHHHHHHHHHHHHhcccCc-----------cccCCCCcEEEECC
Confidence 57899999999999999999999999996 5779999999999999987642221 45789999999999
Q ss_pred CccchHHHHHhHHHHHhhCCeEEeecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhhHHHhhhCCCccEEEEeCCc
Q 015042 81 WNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLTALYYAHLAKLAGIPDGVLNVVPGFGPTAGAAICSHMDIDYVCFTGST 160 (414)
Q Consensus 81 ~n~P~~~~~~~~~~aLaaGN~vv~kps~~~~~~~~~l~~~l~~aG~p~g~v~~v~~~~~~~~~~l~~~~~v~~v~~tGs~ 160 (414)
||||+..+..+++.||++||+|+-||.+++|+.+..-.+++.++|+|++++++++|++..++..|+.+++++.|+||||+
T Consensus 246 WNFPLAIFtGqiaAAL~aGN~VlAKPAEqTpLIAa~aV~ll~eAGvP~~~lqLLpG~G~tvGa~L~~darv~GV~FTGST 325 (769)
T COG4230 246 WNFPLAIFTGQIAAALAAGNSVLAKPAEQTPLIAAQAVRLLHEAGVPPGVLQLLPGRGETVGAALTADARVAGVMFTGST 325 (769)
T ss_pred CCchHHHHHhHHHHHHHcCCccccCccccccHHHHHHHHHHHHcCCChhhHHhcCCCCcccchhhhcCcccceEEEeCcH
Confidence 99999999999999999999999999999999999999999999999999999999998899999999999999999999
Q ss_pred HHHHHHHHHHHhccc--ceeEEEcCCCCCceEcCCCCHHHHHHHHHHHhhccCCCCcccCceEEEeCchHHHHHHHHHHH
Q 015042 161 DVGRLVMQAAAASNL--KQVSLELGGKSPLLIFDDADLDTAADVALLGNLYNKGEICVASSRVFVQEGIYDKFEKKLLEK 238 (414)
Q Consensus 161 ~~g~~i~~~~a~~~~--~~~~~e~gg~~~~iV~~dadl~~aa~~i~~~~~~~~Gq~C~a~~~i~V~~~i~d~f~~~l~~~ 238 (414)
++++.|.+..+.+.+ .|++.|.||.|.|||+++|--+.++..++.|+|..+||.|.+.+.+++++++.|..++.|+-.
T Consensus 326 evA~li~~~LA~r~g~~~pLIAETGGqNAMIVDSsAL~EQVv~Dvl~SAFdSAGQRCSALRvLclQ~DvAd~~l~mLKGA 405 (769)
T COG4230 326 EVARLIQRQLAKRQGRPIPLIAETGGQNAMIVDSSALAEQVVADVLASAFDSAGQRCSALRVLCLQEDVADRILTMLKGA 405 (769)
T ss_pred HHHHHHHHHHhhcCCCCCceEeccCCcceEEeechhhHHHHHHHHHHHHhhcccchhhhhhhhhhhhhHHHHHHHHHHHH
Confidence 999999999885444 579999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhhcccCCCCCCCCcccccCCHHHHHHHHHHHHHHHHcCCEEEeCCcccC-CCCceeeeEEEeeCCCcccccccceecce
Q 015042 239 AKAWLVGDPFDPTVRQGPQISERHFDRILSYIEHGKREGATLLTGGKPIG-DKGYYIEPTIFTNVKEDMIIAKEEIFGPV 317 (414)
Q Consensus 239 ~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~-~~g~~~~Ptvl~~~~~~~~~~~~E~fgPv 317 (414)
+.++++|+|..-.+|+||+|+.+..+.+++.|+..+..|-.+..-..... ..|.|+.||++. ++.- .-++.|+||||
T Consensus 406 m~el~~G~p~~l~tDVGPVIdaEAk~~i~~Hi~~mr~~gr~v~q~~~~~~~q~GtFv~Ptl~E-l~~~-~eL~rEVFGPV 483 (769)
T COG4230 406 MAELRVGNPDRLTTDVGPVIDAEAKANIEKHIQTMRSKGRLVHQAAAPNSLQKGTFVAPTLIE-LENL-DELQREVFGPV 483 (769)
T ss_pred HHHhccCCccceeccccccccHHHHHHHHHHHHHHHhcccchhhccCCCccCCceeeCceeEE-cCCH-HHHHHHhccce
Confidence 99999999999999999999999999999999998887754443322222 379999999995 3332 33588999999
Q ss_pred EEEEeeC--CHHHHHHHhhcCCCCceEEEecCCHHHHHHHHHhcceeEEEEcCcCC--CCCCCCcccCCCCCCC-ccchH
Q 015042 318 MALMKFK--TVEEAIKSANNTQYGLAAGIVTKDLNVANTVSRSIRAGIIWINCYFG--FSMDCPYGGYKMSGFG-REYGL 392 (414)
Q Consensus 318 l~v~~~~--~~~eai~~~n~~~~gl~~sv~s~d~~~~~~~~~~l~~g~v~iN~~~~--~~~~~p~gG~~~sG~g-~~~g~ 392 (414)
+.|++|+ ++++.|+-+|.++|||+.+|+|+-.+.+.++.+++++|++|||.... ...-+||||.|.||+| +.+|+
T Consensus 484 LHVvRy~~~~l~~vi~~INatGyGLT~GvHtRideti~~v~~~~~aGNlYVNRN~vGAVVGVQPFGG~GLSGTGPKAGGp 563 (769)
T COG4230 484 LHVVRYKRDELDEVIDQINATGYGLTLGVHTRIDETIAHVTERAHAGNLYVNRNIVGAVVGVQPFGGEGLSGTGPKAGGP 563 (769)
T ss_pred eEEEEecHHHHHHHHHHHhccCcceeeeeecchHHHHHHHHhhccccceEeeccceeeEEeeccCCCCCCCCCCCCCCCh
Confidence 9999996 69999999999999999999999999999999999999999998765 5567999999999999 69999
Q ss_pred HHHHhhheeeEE
Q 015042 393 ESLYKYLQIKSV 404 (414)
Q Consensus 393 ~~~~~~~~~k~i 404 (414)
..+..|+..+..
T Consensus 564 ~YL~Rl~~~~p~ 575 (769)
T COG4230 564 LYLLRLVSERPW 575 (769)
T ss_pred HHHHHHHhcCCc
Confidence 999999976653
|
|
| >TIGR01092 P5CS delta l-pyrroline-5-carboxylate synthetase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-64 Score=530.77 Aligned_cols=353 Identities=19% Similarity=0.193 Sum_probs=301.0
Q ss_pred CHHHHHHHHHhHHHHHHHHHHhcCCChHHHhhc---------------hHHHHHHHHHHHHHhhhhhcCccccc---CCC
Q 015042 1 MWKFADLIEEHVEELAALDALDAGKVYLRAKTA---------------EIPGAAEFLRFFAGAADKIHGEVLKM---SSE 62 (414)
Q Consensus 1 L~~~a~~l~~~~~~l~~~~~~etGk~~~e~~~~---------------ei~~~~~~l~~~a~~~~~~~~~~~~~---~~~ 62 (414)
|+++++.|++|+++|+ .++||++.++... |+..+++.+++++.. .+..+...+. ..+
T Consensus 314 L~~la~~l~~~~eei~----~e~gkdl~~a~~~~~~~~~~~el~~~~~ei~~~~~~l~~~a~~-~~~~g~~~~~~~~~~~ 388 (715)
T TIGR01092 314 LHDIADALEDNEDEIL----AENKKDVAAAQGAGYAASLVARLSMSPSKISSLAISLRQLAAM-EDPIGRVLKRTRIADN 388 (715)
T ss_pred HHHHHHHHHHHHHHHH----HHHhhhHHHHHhcCcchhHHHHHhCCHHHHHHHHHHHHHHhcC-CCcccccccccccCCC
Confidence 5789999999999997 4777777654321 577888888888873 3333333321 123
Q ss_pred cccceeecCCceEEEEcCCccchHHHHHhHHHHHhhCCeEEeecCCCChHHHHHHHHHHHHcCCCCC----cEEEEeCCc
Q 015042 63 LQGYTLREPVGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLTALYYAHLAKLAGIPDG----VLNVVPGFG 138 (414)
Q Consensus 63 ~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~~~~aLaaGN~vv~kps~~~~~~~~~l~~~l~~aG~p~g----~v~~v~~~~ 138 (414)
...+.+++|+|||++|+||| |+.. ++++++||++||+||+|||+.+|.++..+.+++.++ +|++ +++++++ +
T Consensus 389 ~~~~~~~~P~GVV~~I~PwN-P~~~-~~~~~~ALaaGN~vvlKpse~tp~t~~~l~~l~~~a-lp~g~~~~~~~~v~~-~ 464 (715)
T TIGR01092 389 LILEKTSVPIGVLLIVFESR-PDAL-VQIASLAIRSGNGLLLKGGKEAARSNAILHKVITEA-IPIHVGKKLIGLVTS-R 464 (715)
T ss_pred ceeEEEEeeceEEEEEeCCC-hHHH-HHHHHHHHHhCCEEEEcCcccchHHHHHHHHHHHHH-cCCCCCCcEEEEeCC-h
Confidence 33567899999999999999 9999 589999999999999999999999999999999999 9987 6899985 5
Q ss_pred hhhHHHhhhCCCccEEEEeCCcHHHHHHHHHHHhcccceeEEEcCCCCCceEcCCCCHHHHHHHHHHHhhccCCCCcccC
Q 015042 139 PTAGAAICSHMDIDYVCFTGSTDVGRLVMQAAAASNLKQVSLELGGKSPLLIFDDADLDTAADVALLGNLYNKGEICVAS 218 (414)
Q Consensus 139 ~~~~~~l~~~~~v~~v~~tGs~~~g~~i~~~~a~~~~~~~~~e~gg~~~~iV~~dadl~~aa~~i~~~~~~~~Gq~C~a~ 218 (414)
.+.++.|..|+++|+|+||||+.+|+.|++.++ +|+++|+|||||+||++|||++.|++.++.++|.+ ||.|+++
T Consensus 465 ~~~~~~l~~~~~vd~I~fTGS~~vG~~i~~~A~----~pv~lElgGk~p~iV~~dADl~~A~~~i~~~~~~~-GQ~C~a~ 539 (715)
T TIGR01092 465 EEIPDLLKLDDVIDLVIPRGSNKLVSQIKKSTK----IPVLGHADGICHVYVDKSASVDMAKRIVRDAKCDY-PAACNAM 539 (715)
T ss_pred HHHHHHHhcCCCccEEEEcCCHHHHHHHHHhCC----CCEEEEcCCcceEEECCCCCHHHHHHHHHHHhCCC-CCccccC
Confidence 677888999999999999999999999998753 99999999999999999999999987777776655 9999999
Q ss_pred ceEEEeCchHHHHHHHHHHHHhhcccCCCCCCCCcccccCCHHHHHHHHHHHHHHHHcCCEEEeCCcccCCCCceeeeEE
Q 015042 219 SRVFVQEGIYDKFEKKLLEKAKAWLVGDPFDPTVRQGPQISERHFDRILSYIEHGKREGATLLTGGKPIGDKGYYIEPTI 298 (414)
Q Consensus 219 ~~i~V~~~i~d~f~~~l~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~~~g~~~~Ptv 298 (414)
+|||||++++|+ | .+.+++++++++|++++ ||... . .|+.
T Consensus 540 ~rvlV~~~i~d~-------------------------~--------~~~~~v~~~~~~Ga~l~-Gg~~~--~-~~~~--- 579 (715)
T TIGR01092 540 ETLLVHKDLLRN-------------------------G--------LLDDLIDMLRTEGVTIH-GGPRF--A-AYLT--- 579 (715)
T ss_pred cEEEEehhhccc-------------------------h--------hHHHHHHHHHHCCCEEE-CCcch--h-heec---
Confidence 999999999985 1 25677888888899985 77543 1 2332
Q ss_pred EeeCCCcccccccceecceEEEEeeCCHHHHHHHhhcCCCCceEEEecCCHHHHHHHHHhcceeEEEEcCcCCCCCCCCc
Q 015042 299 FTNVKEDMIIAKEEIFGPVMALMKFKTVEEAIKSANNTQYGLAAGIVTKDLNVANTVSRSIRAGIIWINCYFGFSMDCPY 378 (414)
Q Consensus 299 l~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~sv~s~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~p~ 378 (414)
..+++|.+++||+||||++|++|+|++|||+++|+++|||++||||+|.+.++++++++++|.|+||++....+..||
T Consensus 580 --~~~~~~~i~~eE~FGPvl~v~~~~~~deAi~~~N~~~~gLa~~ift~d~~~a~~~~~~i~sG~V~vN~~~~~~~~~pf 657 (715)
T TIGR01092 580 --FNISETKSFRTEYSSLACTVEIVDDVYDAIDHIHKHGSAHTDCIVTEDENVAEFFLQHVDSAAVFHNASTRFSDGFRF 657 (715)
T ss_pred --cCCCCchhhhccccCceEEEEEECCHHHHHHHHHcCCCCCeEEEEeCCHHHHHHHHHhCCeeEEEEeCCCCCCCCCCC
Confidence 135789999999999999999999999999999999999999999999999999999999999999998766677899
Q ss_pred ccCCCCCCCc----cchHHHHHhhheeeEEEeeCC
Q 015042 379 GGYKMSGFGR----EYGLESLYKYLQIKSVVTPIY 409 (414)
Q Consensus 379 gG~~~sG~g~----~~g~~~~~~~~~~k~i~~~~~ 409 (414)
||.|+||+|+ ++|++++++||+.|+|.+..+
T Consensus 658 GG~k~SG~g~~~~~~~g~~~l~~~~~~k~v~~g~g 692 (715)
T TIGR01092 658 GLGAEVGISTSRIHARGPVGVEGLLTTRWLLRGKG 692 (715)
T ss_pred cCccccccccCCCCCCChhHHHHhceEEEEEECCC
Confidence 9999999995 479999999999999977654
|
This protein contains a glutamate 5-kinase (ProB, EC 2.7.2.11) region followed by a gamma-glutamyl phosphate reductase (ProA, EC 1.2.1.41) region. |
| >KOG2455 consensus Delta-1-pyrroline-5-carboxylate dehydrogenase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.9e-65 Score=478.04 Aligned_cols=411 Identities=27% Similarity=0.433 Sum_probs=370.9
Q ss_pred HHHHHHHH-HhHHHHHHHHHHhcCCChHHHhhchHHHHHHHHHHHHHhhhhhcCccc-ccCCCcccceeecCC-ceEEEE
Q 015042 2 WKFADLIE-EHVEELAALDALDAGKVYLRAKTAEIPGAAEFLRFFAGAADKIHGEVL-KMSSELQGYTLREPV-GVVGHI 78 (414)
Q Consensus 2 ~~~a~~l~-~~~~~l~~~~~~etGk~~~e~~~~ei~~~~~~l~~~a~~~~~~~~~~~-~~~~~~~~~~~~~P~-Gvv~~i 78 (414)
.+.|+++. +++-+|..+.++-.||...++...-+.+.++.+|+.+..+.++..... ...++..+..+++|+ |.|.+|
T Consensus 125 lkAAdlistkyr~~l~aatMlgqgKt~~qAeiDa~~eLidf~R~na~ya~eL~~~qpi~~~~~t~ns~~yRpleGFVaAi 204 (561)
T KOG2455|consen 125 LKAADLISTKYRYDLLAATMLGQGKTAIQAEIDAAAELIDFFRFNAKYASELYAQQPISQTKGTWNSMEYRPLEGFVAAI 204 (561)
T ss_pred HHHHHHhcchHHHHHHHHHHhcCCcchHHHHHHHHHHHHHHHHHhHHHHHHhhhcCCccccCCCCcceeeccccceeEEe
Confidence 57888888 788889999999999999876433366788889998888877755432 224667777888886 999999
Q ss_pred cCCccchHHHHHhHHHHHhhCCeEEeecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhhHHHhhhCCCccEEEEeC
Q 015042 79 IPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLTALYYAHLAKLAGIPDGVLNVVPGFGPTAGAAICSHMDIDYVCFTG 158 (414)
Q Consensus 79 ~p~n~P~~~~~~~~~~aLaaGN~vv~kps~~~~~~~~~l~~~l~~aG~p~g~v~~v~~~~~~~~~~l~~~~~v~~v~~tG 158 (414)
+|+||.-...-...+||| +||+|++|||..+.+++.++.++|+|||+|+|++|++|+++...++.+..+|++..+.|||
T Consensus 205 sPFnftAI~gnLa~aPaL-MGN~VLwkPS~ta~lssYii~~il~EAGlP~GvinFvPad~~~f~dtita~~hfaglnftg 283 (561)
T KOG2455|consen 205 SPFNFTAIGGNLAGAPAL-MGNVVLWKPSDTAALSSYIIYRILREAGLPPGVINFVPADGPLFGDTITASPHFAGLNFTG 283 (561)
T ss_pred cccceeeeccccccChhh-hcceeeecccchhHHHHHHHHHHHHHcCCCccceeeccCCCCeecceeccCcccceeeeec
Confidence 999999888888889999 6999999999999999999999999999999999999999999999999999999999999
Q ss_pred CcHHHHHHHHHHH-----hcccceeEEEcCCCCCceEcCCCCHHHHHHHHHHHhhccCCCCcccCceEEEeCchHHHHHH
Q 015042 159 STDVGRLVMQAAA-----ASNLKQVSLELGGKSPLLIFDDADLDTAADVALLGNLYNKGEICVASSRVFVQEGIYDKFEK 233 (414)
Q Consensus 159 s~~~g~~i~~~~a-----~~~~~~~~~e~gg~~~~iV~~dadl~~aa~~i~~~~~~~~Gq~C~a~~~i~V~~~i~d~f~~ 233 (414)
|..+-+.+.+..+ +....+++.|+||||.-+|+++||++.++...++++|-++||.|.+.+|+||+++.+..+.+
T Consensus 284 S~~~fk~lwk~V~~n~~~Y~~fPrlvgEcgGkNFHfVH~SA~VesvV~~TvrsAfey~GQkcsA~SRmYvp~s~wp~i~e 363 (561)
T KOG2455|consen 284 SVPTFKHLWKKVGENVDNYRTFPRLVGECGGKNFHFVHASADVESVVSSTVRSAFEYQGQKCSACSRMYVPESLWPQIRE 363 (561)
T ss_pred ccHHHHHHHHHHHhhhhhhhcchhhhccCCCcceEEeccccchHHHHHHHHHHHHhhcccccchhhhcccchhhcHHHHH
Confidence 9999999988776 23567899999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhhcccCCC-CCCCCcccccCCHHHHHHHHHHHHHHHHcC-CEEEeCCcccCCCCceeeeEEEeeCCCccccccc
Q 015042 234 KLLEKAKAWLVGDP-FDPTVRQGPQISERHFDRILSYIEHGKREG-ATLLTGGKPIGDKGYYIEPTIFTNVKEDMIIAKE 311 (414)
Q Consensus 234 ~l~~~~~~~~~g~~-~~~~~~~gpl~~~~~~~~~~~~i~~a~~~g-a~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~ 311 (414)
.|.+.-+++++|+| .|.++.+||+|....++|++++|+.|+... .++++||..++..|+|+.|||+...+|++++|.|
T Consensus 364 ~l~~~~~q~~igd~~~d~~~f~gavIh~~sF~rl~k~le~ak~~~~leiL~GGk~DdS~G~FV~PTiv~~kdP~~pim~e 443 (561)
T KOG2455|consen 364 ELVEEHSQLKIGDPVIDFSTFIGAVIHDKSFARLKKVLEHAKKDPELEILAGGKCDDSTGYFVEPTIVLSKDPKDPIMTE 443 (561)
T ss_pred HHHHHHhhcccCCccccccchhhhhccHHHHHHHHHHHHhhccCccceeeecCcccCCCCeeecceEEEccCCCcchhhh
Confidence 99999999999997 788999999999999999999999998753 5899999999999999999999999999999999
Q ss_pred ceecceEEEEeeCC--HHHHHHHh-hcCCCCceEEEecCCHHHHHHHHHhcc--eeEEEEcCcCC--CCCCCCcccCCCC
Q 015042 312 EIFGPVMALMKFKT--VEEAIKSA-NNTQYGLAAGIVTKDLNVANTVSRSIR--AGIIWINCYFG--FSMDCPYGGYKMS 384 (414)
Q Consensus 312 E~fgPvl~v~~~~~--~~eai~~~-n~~~~gl~~sv~s~d~~~~~~~~~~l~--~g~v~iN~~~~--~~~~~p~gG~~~s 384 (414)
|+||||++|+.|.| ++|+++++ |.++|+|+.+||++|.+.+++..++|+ +|+.|||+.++ ...+.||||.+.|
T Consensus 444 e~fGPvLsVyvY~Dd~~~E~l~lv~~tt~YaLTGaiFaqd~~vv~~a~~~Lr~aAgNfYiNdKcTGsvvgqqpFGGaR~S 523 (561)
T KOG2455|consen 444 EIFGPVLSVYVYEDDKFDEVLKLVDNTTPYALTGAIFAQDREVVLHALDVLRMAAGNFYINDKCTGSVVGQQPFGGARLS 523 (561)
T ss_pred hccCceeEEEEeccccHHHHHHHHhcCCcceeccccccccHHHHHHHHHHHHhhhcceEEccccccceeeccccCccccc
Confidence 99999999999975 89999998 558999999999999999999999997 89999999776 4578999999999
Q ss_pred CCC-ccchHHHHHhhheeeEEEeeC-CCCCC
Q 015042 385 GFG-REYGLESLYKYLQIKSVVTPI-YNSPW 413 (414)
Q Consensus 385 G~g-~~~g~~~~~~~~~~k~i~~~~-~~~~~ 413 (414)
|+. ..+|++.+.+|+.+++|-..+ +.++|
T Consensus 524 GTNDKaGgp~~l~RwtSp~~ikEt~~~l~d~ 554 (561)
T KOG2455|consen 524 GTNDKAGGPHYLLRWTSPLSIKETFVPLTDV 554 (561)
T ss_pred CCCCCCCCceEEEeecCcchhhhcccCCccc
Confidence 998 688999999999999886554 34555
|
|
| >KOG2452 consensus Formyltetrahydrofolate dehydrogenase [Nucleotide transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-63 Score=471.61 Aligned_cols=386 Identities=42% Similarity=0.785 Sum_probs=357.6
Q ss_pred CHHHHHHHHHhHHHHHHHHHHhcCCChHHHhhchHHHHHHHHHHHHHhhhhhcCcccccC----CCcccceeecCCceEE
Q 015042 1 MWKFADLIEEHVEELAALDALDAGKVYLRAKTAEIPGAAEFLRFFAGAADKIHGEVLKMS----SELQGYTLREPVGVVG 76 (414)
Q Consensus 1 L~~~a~~l~~~~~~l~~~~~~etGk~~~e~~~~ei~~~~~~l~~~a~~~~~~~~~~~~~~----~~~~~~~~~~P~Gvv~ 76 (414)
|.++++++++|+++|+.+.++|.|--..-+...-+.-+++.+||++.|-+++.+..++.. .......+++|+|||+
T Consensus 489 ~y~la~lme~h~eelat~e~ldagavytlalkthvgmsi~~~ryfagwcdkiqg~tipi~~arpn~nl~lt~~epigv~g 568 (881)
T KOG2452|consen 489 MYRLADLMEQHQEELATIEALDAGAVYTLALKTHVGMSIQTFRYFAGWCDKIQGSTIPINQARPNRNLTLTRKEPVGVCG 568 (881)
T ss_pred hhhccchhhhccchhhhhhhccccceeeeeehhhcCceehHHHHhhhhhhhccCceeccccCCCCCcceeeecCcceeEE
Confidence 468999999999999999999999755434445677789999999999999999988764 3455778999999999
Q ss_pred EEcCCccchHHHHHhHHHHHhhCCeEEeecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhhHHHhhhCCCccEEEE
Q 015042 77 HIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLTALYYAHLAKLAGIPDGVLNVVPGFGPTAGAAICSHMDIDYVCF 156 (414)
Q Consensus 77 ~i~p~n~P~~~~~~~~~~aLaaGN~vv~kps~~~~~~~~~l~~~l~~aG~p~g~v~~v~~~~~~~~~~l~~~~~v~~v~~ 156 (414)
+|+|||||+..+.|+.+.+|++- ..++.+ -.|++|+++|.++-+++.|..||+++.+-|
T Consensus 569 ~i~pwnyplmmlswk~aaclaa~-----------------~~k~~e----~sgvini~~gsgslvg~rls~hpdvrkigf 627 (881)
T KOG2452|consen 569 IIIPWNYPLMMLSWKTAACLAAQ-----------------VLKFAE----LTGVVNVLPGSGSLVGQRLSDHPDVRKIGF 627 (881)
T ss_pred EeccCCchHHHHHHHHHHHHHHH-----------------Hhhhhh----hcceEEEecCCcchhccccccCCccceecc
Confidence 99999999999999999998632 112221 248999999999899999999999999999
Q ss_pred eCCcHHHHHHHHHHHhcccceeEEEcCCCCCceEcCCCCHHHHHHHHHHHhhccCCCCcccCceEEEeCchHHHHHHHHH
Q 015042 157 TGSTDVGRLVMQAAAASNLKQVSLELGGKSPLLIFDDADLDTAADVALLGNLYNKGEICVASSRVFVQEGIYDKFEKKLL 236 (414)
Q Consensus 157 tGs~~~g~~i~~~~a~~~~~~~~~e~gg~~~~iV~~dadl~~aa~~i~~~~~~~~Gq~C~a~~~i~V~~~i~d~f~~~l~ 236 (414)
|||+..|+.|++.++..+.|++.+|+||++|+|+..|||++.|+.....+.|++-|..|.+..|+||.+++.|+|+.+++
T Consensus 628 tgsteig~~im~sca~snikkvslelgg~sp~iifad~dl~kav~~~~~~vff~kgenciaagr~fi~~sihd~fv~~~v 707 (881)
T KOG2452|consen 628 TGSTEVGKHIMKSCAISNVKKVSLELGGESPFIIFADCDLNKAVQMGMSSVFFSKGENCIAAGRLFVEDSIHDEFVRRVV 707 (881)
T ss_pred ccchHHHHHHHHHHhhcchheeeeeccCCCceEEEecCcHHHHHHhhccceeecCCcchhhhcceeehhhhhHHHHHHHH
Confidence 99999999999999977889999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhhcccCCCCCCCCcccccCCHHHHHHHHHHHHHHHHcCCEEEeCCcccCCCCceeeeEEEeeCCCcccccccceecc
Q 015042 237 EKAKAWLVGDPFDPTVRQGPQISERHFDRILSYIEHGKREGATLLTGGKPIGDKGYYIEPTIFTNVKEDMIIAKEEIFGP 316 (414)
Q Consensus 237 ~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgP 316 (414)
+.+++.++|+|+|.+++.||.-...|..++-+|.+.++..|+++.|||++.+..|.|++|||+.+++..|.+..||-|||
T Consensus 708 ee~~~~~ig~pldr~t~hgpqnh~ahl~kl~ey~~~~v~~ga~~~~gg~~~~r~g~~f~pti~s~i~d~~f~a~eesfgp 787 (881)
T KOG2452|consen 708 EEVRKMKVGNPLDRDTDHGPQNHHAHLVKLMEYCQHGVKEGATLVCGGNQVPRPGFFFEPTVFTDVEDHMFIAKEESFGP 787 (881)
T ss_pred HHHHhhccCCcccccccCCchhHHHHHHHHHHHHHHHhccCcEEEECCccCCCCCcccCCeeecccchhhhhhhccccCc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eEEEEeeC--CHHHHHHHhhcCCCCceEEEecCCHHHHHHHHHhcceeEEEEcCcCCCCCCCCcccCCCCCCCccchHHH
Q 015042 317 VMALMKFK--TVEEAIKSANNTQYGLAAGIVTKDLNVANTVSRSIRAGIIWINCYFGFSMDCPYGGYKMSGFGREYGLES 394 (414)
Q Consensus 317 vl~v~~~~--~~~eai~~~n~~~~gl~~sv~s~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~p~gG~~~sG~g~~~g~~~ 394 (414)
|+.|.+|+ |+|+.+..+|++++||+++|||+|...+.++++.|.+|+|+||+..-.+...||||+|+||+|...|..+
T Consensus 788 im~is~f~d~d~~~vl~ran~tefgla~gvftrd~~k~l~v~~~l~agtvfvnty~ktdvaapfggfkqsgfgkd~ge~a 867 (881)
T KOG2452|consen 788 VMIISRFADGDLDAVLSRANATEFGLASGVFTRDINKALYVSDKLQAGTVFVNTYNKTDVAAPFGGFKQSGFGKDLGEAA 867 (881)
T ss_pred eEEEEecCCCCHHHHHhhccccccccccceeecccchhhhhhhhhccceEEEeeccccccccCCCCccccccccchhHHH
Confidence 99999997 5899999999999999999999999999999999999999999998888889999999999999999999
Q ss_pred HHhhheeeEEEee
Q 015042 395 LYKYLQIKSVVTP 407 (414)
Q Consensus 395 ~~~~~~~k~i~~~ 407 (414)
+.+|.++|+|++.
T Consensus 868 lneyl~~ktit~e 880 (881)
T KOG2452|consen 868 LNEYLRVKTVTFE 880 (881)
T ss_pred HhhheeeEEEEee
Confidence 9999999999764
|
|
| >KOG2453 consensus Aldehyde dehydrogenase [Energy production and conversion] | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.6e-63 Score=449.82 Aligned_cols=407 Identities=26% Similarity=0.470 Sum_probs=378.0
Q ss_pred HHHHHHHHHhHHHHHHHHHHhcCCChHHHhhchHHHHHHHHHHHHHhhhhhcCcccccC-CCcccceeecCCceEEEEcC
Q 015042 2 WKFADLIEEHVEELAALDALDAGKVYLRAKTAEIPGAAEFLRFFAGAADKIHGEVLKMS-SELQGYTLREPVGVVGHIIP 80 (414)
Q Consensus 2 ~~~a~~l~~~~~~l~~~~~~etGk~~~e~~~~ei~~~~~~l~~~a~~~~~~~~~~~~~~-~~~~~~~~~~P~Gvv~~i~p 80 (414)
+++.|.|++..+-|.+++++|+||-..| -..|+++-++.+.|...+.+.+.+..+|.. ++.-....+-|+|+|.+|+.
T Consensus 84 rqigdalr~klq~lg~lvslemgkilae-gvgevqeyvdicdyavglsr~l~g~i~pserpghalleqwnplg~vgvita 162 (507)
T KOG2453|consen 84 RQIGDALRTKLQNLGKLVSLEMGKILAE-GVGEVQEYVDICDYAVGLSRSLEGKIFPSERPGHALLEQWNPLGVVGVITA 162 (507)
T ss_pred HHHHHHHHHHHHHHhhhhhhhhhhHhhh-cchhHHHHHHHHHHhhhhhhhhCCcccCCCCCchhHHHhcCCcceEEEEEe
Confidence 6889999999999999999999999887 578999999999999998888888887765 45556778999999999999
Q ss_pred CccchHHHHHhHHHHHhhCCeEEeecCCCChHHHHHHH----HHHHHcCCCCCcEEEEeCCchhhHHHhhhCCCccEEEE
Q 015042 81 WNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLTALYYA----HLAKLAGIPDGVLNVVPGFGPTAGAAICSHMDIDYVCF 156 (414)
Q Consensus 81 ~n~P~~~~~~~~~~aLaaGN~vv~kps~~~~~~~~~l~----~~l~~aG~p~g~v~~v~~~~~~~~~~l~~~~~v~~v~~ 156 (414)
+|||....-|.-+.|+.+||+|++||++.+|+++...- +.|.+--+|.+..+..+| +.+.++++..+.++..+.|
T Consensus 163 fnfpcavygwnnaiaMv~gncVvWKpApttpLtTiAvtklIaevL~qnnl~~aicsltcG-~aDigrAaakdgRvnlvsf 241 (507)
T KOG2453|consen 163 FNFPCAVYGWNNAIAMVCGNCVVWKPAPTTPLTTIAVTKLIAEVLEQNNLPGAICSLTCG-GADIGRAAAKDGRVNLVSF 241 (507)
T ss_pred ccCCceeeccCchhhhhhcceeEecCCCCcceeHHHHHHHHHHHHhccCCCcceeeeccc-chhhhhhccccCceeeccc
Confidence 99999999999999999999999999999998776554 446666789999999998 7789999999999999999
Q ss_pred eCCcHHHHHHHHHHHhcccceeEEEcCCCCCceEcCCCCHHHHHHHHHHHhhccCCCCcccCceEEEeCchHHHHHHHHH
Q 015042 157 TGSTDVGRLVMQAAAASNLKQVSLELGGKSPLLIFDDADLDTAADVALLGNLYNKGEICVASSRVFVQEGIYDKFEKKLL 236 (414)
Q Consensus 157 tGs~~~g~~i~~~~a~~~~~~~~~e~gg~~~~iV~~dadl~~aa~~i~~~~~~~~Gq~C~a~~~i~V~~~i~d~f~~~l~ 236 (414)
|||...++.+.+... .+..+..+|+||+|..||.+|||+..++...++++...+||.|+..+|+++|+++||+.+++|+
T Consensus 242 tGssQvgKsvgq~vq-arfgk~llelggnnaiiv~edadl~lvvps~lfaavgtagqrctt~rrl~~hesvyd~vlerlk 320 (507)
T KOG2453|consen 242 TGSSQVGKSVGQQVQ-ARFGKLLLELGGNNAIIVNEDADLNLVVPSTLFAAVGTAGQRCTTTRRLIVHESVYDQVLERLK 320 (507)
T ss_pred ccchhhhhHHHHHHH-HHhhhHHHhhcCCceEEEeccccceeeehHHHHHHhcccccchhhhhHHHhhHHHHHHHHHHHH
Confidence 999999999998877 6677899999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhhcccCCCCCCCCcccccCCHHHHHHHHHHHHHHHHcCCEEEeCCcccCCCCceeeeEEEeeCCCcccccccceecc
Q 015042 237 EKAKAWLVGDPFDPTVRQGPQISERHFDRILSYIEHGKREGATLLTGGKPIGDKGYYIEPTIFTNVKEDMIIAKEEIFGP 316 (414)
Q Consensus 237 ~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgP 316 (414)
....++++|+|+|+.+.+||+.+.+...+...-+++++..|+++.+||+..+.+|+|+.|||++ +..|.++..+|.|.|
T Consensus 321 kayaq~~ignpld~ntl~gplht~qav~~f~~~veeak~~ggki~yggkv~er~gnfveptivt-l~hda~vv~~etfap 399 (507)
T KOG2453|consen 321 KAYAQFEIGNPLDSNTLIGPLHTQQAVGKFKASVEEAKASGGKIEYGGKVLERDGNFVEPTIVT-LKHDAPVVLRETFAP 399 (507)
T ss_pred HHHHheecCCcCCCCceeccccCHHHHHHHHHHHHHHHhcCCeEEECCEeeccCCCcccceEEE-ecCCcchhhhhhccc
Confidence 9999999999999999999999999999999999999999999999999988899999999997 899999999999999
Q ss_pred eEEEEeeCCHHHHHHHhhcCCCCceEEEecCCHHHHHHHHHhc--ceeEEEEcCcCC-CCCCCCcccCCCCCCCccchHH
Q 015042 317 VMALMKFKTVEEAIKSANNTQYGLAAGIVTKDLNVANTVSRSI--RAGIIWINCYFG-FSMDCPYGGYKMSGFGREYGLE 393 (414)
Q Consensus 317 vl~v~~~~~~~eai~~~n~~~~gl~~sv~s~d~~~~~~~~~~l--~~g~v~iN~~~~-~~~~~p~gG~~~sG~g~~~g~~ 393 (414)
|++|.+|++++||+.+-|..+.||+.||||+|.+.+-++..-. ++|.|.||.++. ...+-.|||-|.+|.|++.|.+
T Consensus 400 ilyvlkf~~~eea~ainnev~qglsssift~n~~nifrw~gpkgsdcgivnvniptsgaeiggafggek~tgggresgsd 479 (507)
T KOG2453|consen 400 ILYVLKFSTLEEAIAINNEVDQGLSSSIFTTNIQNIFRWMGPKGSDCGIVNVNIPTSGAEIGGAFGGEKETGGGRESGSD 479 (507)
T ss_pred eeeEEeccchhhhheeccccccccchhhhhcCHHHHHhhhCCCCCccceEEecCCCCchhhcccccCccccCCCcccCch
Confidence 9999999999999999999999999999999999998888655 799999999876 4467899999999999999999
Q ss_pred HHHhhheeeEEEeeCCCCC
Q 015042 394 SLYKYLQIKSVVTPIYNSP 412 (414)
Q Consensus 394 ~~~~~~~~k~i~~~~~~~~ 412 (414)
++++|+++.+.+++..+++
T Consensus 480 swkqymrrstctinyskel 498 (507)
T KOG2453|consen 480 SWKQYMRRSTCTINYSKEL 498 (507)
T ss_pred HHHHHHhhceeeeeccccC
Confidence 9999999999999987653
|
|
| >cd07080 ALDH_Acyl-CoA-Red_LuxC Acyl-CoA reductase LuxC | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.4e-33 Score=277.84 Aligned_cols=271 Identities=17% Similarity=0.175 Sum_probs=211.4
Q ss_pred CcccceeecCCceEEEEcCCccchHHHHHhHHHHHhhCCeEEeecCCCChHHHHHHHHHHHHcCCCC----CcEEEE--e
Q 015042 62 ELQGYTLREPVGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLTALYYAHLAKLAGIPD----GVLNVV--P 135 (414)
Q Consensus 62 ~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~~~~aLaaGN~vv~kps~~~~~~~~~l~~~l~~aG~p~----g~v~~v--~ 135 (414)
+...+++++|+||+++|+|||+|+ ..++.+++||++||++|+|||+.+|.++..+.++|.++ +|+ +.++++ +
T Consensus 103 ~~~~~~~~~P~Gvv~~I~p~N~P~-l~~~s~~~aLlaGN~~ilKpS~~~p~~~~~l~~~l~~~-~p~~~~~~~~~vv~~~ 180 (422)
T cd07080 103 GRGGYIRAQPRGLVVHIIAGNVPL-LPVWSIVRGLLVKNVNLLKMSSSDPLTATALLRSLADV-DPNHPLTDSISVVYWP 180 (422)
T ss_pred CCCCeeEEcCCceEEEEccCCccc-cHHHHHHHHHHhcCceEEECCCccchHHHHHHHHHHhc-CCCCcccceEEEEEec
Confidence 456688999999999999999999 78999999999999999999999999999999999999 787 888888 4
Q ss_pred CCchhhHHHhhhCCCccEEEEeCCcHHHHHHHHHHHhcccceeEEEcCCC-CCceEcCCC----CHHHHHHHHHHHhhcc
Q 015042 136 GFGPTAGAAICSHMDIDYVCFTGSTDVGRLVMQAAAASNLKQVSLELGGK-SPLLIFDDA----DLDTAADVALLGNLYN 210 (414)
Q Consensus 136 ~~~~~~~~~l~~~~~v~~v~~tGs~~~g~~i~~~~a~~~~~~~~~e~gg~-~~~iV~~da----dl~~aa~~i~~~~~~~ 210 (414)
+.+.+.++.|..++ |+|+||||+++++.|++.++ ++ +.++|+||| +++|+++++ |++.+++.++++++.+
T Consensus 181 g~~~~~~~~l~~~~--D~i~~~Gs~~~~~~i~~~a~-~~--~~~Le~Ggk~s~~vi~~~a~~~~dl~~aa~~~a~~~~~~ 255 (422)
T cd07080 181 GGDAELEERILASA--DAVVAWGGEEAVKAIRSLLP-PG--CRLIDFGPKYSFAVIDREALESEKLAEVADALAEDICRY 255 (422)
T ss_pred CCchHHHHHHHHhC--CEEEEeCCHHHHHHHHHhCC-CC--CeeeecCCceeEEEecHHhhccccHHHHHHHHHHHHHHH
Confidence 65556888898887 99999999999999998876 43 569999999 556666668 9999999999999999
Q ss_pred CCCCcccCceEEEeCch---HHHHHHHHHHHHhhcccCCCCCCCCcccccCCHHHHHHHHHHHHHHHHcCCEEEeCCccc
Q 015042 211 KGEICVASSRVFVQEGI---YDKFEKKLLEKAKAWLVGDPFDPTVRQGPQISERHFDRILSYIEHGKREGATLLTGGKPI 287 (414)
Q Consensus 211 ~Gq~C~a~~~i~V~~~i---~d~f~~~l~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ga~v~~gg~~~ 287 (414)
+||.|.|+++||||+++ +++|.+.|.++++++.-..|.. +. +.+...++...-..+...+.+....+
T Consensus 256 ~gQ~C~sp~~v~V~~~~~~~~~~f~~~l~~~l~~~~~~~p~~------~~-~~~~~~~~~~~r~~~~~~~~~~~~~~--- 325 (422)
T cd07080 256 DQQACSSPQVVFVEKDDDEELREFAEALAAALERLPRRYPAL------SL-SAAESAKIARARLEAEFYELKGGVSR--- 325 (422)
T ss_pred hhhhccCCeEEEEECCCCchHHHHHHHHHHHHHHHHHhCCCC------CC-CHHHHHHHHHHHHHHHHHHHhcCCCC---
Confidence 99999999999999999 9999999999999875433321 11 33333333333222222222211111
Q ss_pred CCCCceeeeEEEeeCCCcccccccceecceEEEEeeCCHHHHHHHhhcCCCCceEEEecCCHHHHHHHHHhcc
Q 015042 288 GDKGYYIEPTIFTNVKEDMIIAKEEIFGPVMALMKFKTVEEAIKSANNTQYGLAAGIVTKDLNVANTVSRSIR 360 (414)
Q Consensus 288 ~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~sv~s~d~~~~~~~~~~l~ 360 (414)
.. ..||+...++. + .....+=.+.|+++++++|++..++. +-.|+++|..+.+. .++++++.
T Consensus 326 -~~----~~~v~~~~~~~--~-~~~~~~r~v~v~~v~~l~~~l~~~~~--~lQTvg~~~~~~~~-~~~~~~l~ 387 (422)
T cd07080 326 -DL----GWTVIISDEIG--L-EASPLNRTVNVKPVASLDDVLRPVTP--YLQTVGLAPSPAEL-AELADALA 387 (422)
T ss_pred -CC----CeEEEEeCCCC--c-cCCCCcCEEEEEEcchHHHHHHhhhh--hcceeEeecChhhH-HHHHHHHH
Confidence 11 33555433322 1 11456678899999999999999985 77899999988877 77777775
|
Acyl-CoA reductase, LuxC, (EC=1.2.1.50) is the fatty acid reductase enzyme responsible for synthesis of the aldehyde substrate for the luminescent reaction catalyzed by luciferase. The fatty acid reductase, a luminescence-specific, multienzyme complex (LuxCDE), reduces myristic acid to generate the long chain fatty aldehyde required for the luciferase-catalyzed reaction resulting in the emission of blue-green light. Mutational studies of conserved cysteines of LuxC revealed that the cysteine which aligns with the catalytic cysteine conserved throughout the ALDH superfamily is the LuxC acylation site. This CD is composed of mainly bacterial sequences but also includes a few archaeal sequences similar to the Methanospirillum hungateiacyl acyl-CoA reductase RfbN. |
| >COG0014 ProA Gamma-glutamyl phosphate reductase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-32 Score=259.85 Aligned_cols=360 Identities=21% Similarity=0.234 Sum_probs=282.2
Q ss_pred CHHHHHHHHHhHHHHHHHHHHh------cCCChHHH-----hhchHHHHHHHHHHHHHhhhhhcCccccc---CCCcccc
Q 015042 1 MWKFADLIEEHVEELAALDALD------AGKVYLRA-----KTAEIPGAAEFLRFFAGAADKIHGEVLKM---SSELQGY 66 (414)
Q Consensus 1 L~~~a~~l~~~~~~l~~~~~~e------tGk~~~e~-----~~~ei~~~~~~l~~~a~~~~~~~~~~~~~---~~~~~~~ 66 (414)
|.++|+.|+++.++|.++..+| .|.+.... ....+..+++.++..+.+.+++ |+++.. +.|-..+
T Consensus 31 L~a~A~~L~~~~~~IL~AN~~Dl~~are~gl~~~m~DRL~L~~~Ri~~ma~gl~~Va~L~DPv-Gev~~~~~~~nGL~i~ 109 (417)
T COG0014 31 LLAMADALEAARAEILAANAKDLAAARENGLSEAMLDRLALTPSRIEAMADGLRQVAALPDPV-GEVIDGWTLPNGLQIY 109 (417)
T ss_pred HHHHHHHHHHhHHHHHHhhHHHHHHHHHcCCcHHHHHHHcCCHHHHHHHHHHHHHHhcCCCch-HhhhccccCCCCCEEE
Confidence 4577888888888877776665 44442111 1125667777777777776665 443332 3577788
Q ss_pred eeecCCceEEEEcCCccchHHHHHhHHHHHhhCCeEEeecCCCChHHHHHHHHH----HHHcCCCCCcEEEEeCCchhh-
Q 015042 67 TLREPVGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLTALYYAHL----AKLAGIPDGVLNVVPGFGPTA- 141 (414)
Q Consensus 67 ~~~~P~Gvv~~i~p~n~P~~~~~~~~~~aLaaGN~vv~kps~~~~~~~~~l~~~----l~~aG~p~g~v~~v~~~~~~~- 141 (414)
..+.|+||+++| +...........+-||++||+||+|.+..+..+...+.++ |.++|+|++.||+++..+++.
T Consensus 110 ~~rvPLGVigvI--YEsRPnVtvdaaaLclKsGNAvILRGGsea~~Sn~ai~~~i~~aL~~~~lP~~aVqli~~~~R~~v 187 (417)
T COG0014 110 RVRVPLGVIGVI--YESRPNVTVDAAALCLKSGNAVILRGGSEAIHSNAAIVEVIQEALEKAGLPADAVQLIEDTDREEV 187 (417)
T ss_pred EEEccceEEEEE--EecCCccHHHHHHHHHhcCCEEEEeCcHHHhhhHHHHHHHHHHHHHHcCCCHHHhhhccCCCHHHH
Confidence 889999999999 8889999999999999999999999999999998888776 667799999999998865554
Q ss_pred HHHhhhCCCccEEEEeCCcHHHHHHHHHHHhcccceeEEEcCCCCCceEcCCCCHHHHHHHHHHHhhccCCCCcccCceE
Q 015042 142 GAAICSHMDIDYVCFTGSTDVGRLVMQAAAASNLKQVSLELGGKSPLLIFDDADLDTAADVALLGNLYNKGEICVASSRV 221 (414)
Q Consensus 142 ~~~l~~~~~v~~v~~tGs~~~g~~i~~~~a~~~~~~~~~e~gg~~~~iV~~dadl~~aa~~i~~~~~~~~Gq~C~a~~~i 221 (414)
.+.|.....+|.|+-.||..--+.+.+.+. .|++-.+-|++.++|+.+||++.|.+-++.+++...+ .|++.+.+
T Consensus 188 ~~ll~l~~yiD~iIPRGg~~Li~~v~~~a~----vPVi~~~~G~CHiyvd~~ADld~A~~ii~nAKtqrPs-~CNA~EtL 262 (417)
T COG0014 188 LELLRLDGYIDLVIPRGGAGLIRRVVENAT----VPVIEHGVGNCHIYVDESADLDKALKIIVNAKTQRPS-VCNAAETL 262 (417)
T ss_pred HHHHhhcCceeEEEcCCcHHHHHHHHhCCc----CCEEecCcceEEEEecccCCHHHHHHHHHcccCCCCc-ccchHHHH
Confidence 455555566999999999998887777653 8999999999999999999999999999999999988 99999999
Q ss_pred EEeCchHHHHHHHHHHHHhhcccCCCCCCCCcccccCCHHHHHHHHHHHHHHHHcCCEEEeCCcccCCCCceeeeEEEee
Q 015042 222 FVQEGIYDKFEKKLLEKAKAWLVGDPFDPTVRQGPQISERHFDRILSYIEHGKREGATLLTGGKPIGDKGYYIEPTIFTN 301 (414)
Q Consensus 222 ~V~~~i~d~f~~~l~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~~~g~~~~Ptvl~~ 301 (414)
+||+.+.++|+..|.+.+....+ .+-. +.+ ..+++.+. +
T Consensus 263 LVh~~ia~~fLp~l~~~l~~~gv--------elr~--d~~----~~~~~~~~-----------------~---------- 301 (417)
T COG0014 263 LVHRAIAKSFLPKLANALQEAGV--------ELRG--DAE----ALALLPDA-----------------V---------- 301 (417)
T ss_pred HcCHHHHHHhHHHHHHHHHhcCe--------EEEc--CHH----HHHhcccc-----------------C----------
Confidence 99999999999999988874221 1000 111 11111100 0
Q ss_pred CCCcccccccceecceEEEEeeCCHHHHHHHhhcCCCCceEEEecCCHHHHHHHHHhcceeEEEEcCcCCCCCCCCcccC
Q 015042 302 VKEDMIIAKEEIFGPVMALMKFKTVEEAIKSANNTQYGLAAGIVTKDLNVANTVSRSIRAGIIWINCYFGFSMDCPYGGY 381 (414)
Q Consensus 302 ~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~sv~s~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~p~gG~ 381 (414)
.+....=+..|...+++.|..|++.++||+++|..+.+++-+|.|+|.+.+++|.+.+++..||||.++.|..+.-||=-
T Consensus 302 ~~A~e~Dw~tEyLd~ilavkvVd~ld~AI~HIn~y~S~HsdaIiTe~~~~a~~F~~~VDSAaVyvNASTRFtDG~~fG~G 381 (417)
T COG0014 302 KPATEEDWDTEYLDLILAVKVVDSLDEAIAHINTYGSGHSDAIITEDYANAERFVNEVDSAAVYVNASTRFTDGGQFGLG 381 (417)
T ss_pred CCCchhhHHHHhhhheeEEEEeCCHHHHHHHHHHhCCCCCcceeeCCHHHHHHHHhhcchheEEEecccccccCccccCc
Confidence 11222235789999999999999999999999999999999999999999999999999999999999998876666411
Q ss_pred CCCCC----CccchHHHHHhhheeeEEEeeCC
Q 015042 382 KMSGF----GREYGLESLYKYLQIKSVVTPIY 409 (414)
Q Consensus 382 ~~sG~----g~~~g~~~~~~~~~~k~i~~~~~ 409 (414)
.+-|. ....|+.|++++|..|.|....+
T Consensus 382 aEiGISTqKlHARGPmGLe~LTs~Kyiv~G~G 413 (417)
T COG0014 382 AEIGISTQKLHARGPMGLEALTSYKYIVRGDG 413 (417)
T ss_pred eEEEeecCcccCCCCCChhhhcceeEEEeCCc
Confidence 12222 34679999999999999876543
|
|
| >KOG4165 consensus Gamma-glutamyl phosphate reductase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.93 E-value=1e-24 Score=199.33 Aligned_cols=356 Identities=21% Similarity=0.203 Sum_probs=269.4
Q ss_pred CHHHHHHHHHhHHHHHHHH------HHhcCCChHHH-----hhchHHHHHHHHHHHHHhhhhhcCcccc---cCCCcccc
Q 015042 1 MWKFADLIEEHVEELAALD------ALDAGKVYLRA-----KTAEIPGAAEFLRFFAGAADKIHGEVLK---MSSELQGY 66 (414)
Q Consensus 1 L~~~a~~l~~~~~~l~~~~------~~etGk~~~e~-----~~~ei~~~~~~l~~~a~~~~~~~~~~~~---~~~~~~~~ 66 (414)
|+++++.|..+..++.++. ++++|...... ....+......++..++ .+...|.+.. ..++-..+
T Consensus 28 l~~iad~L~~~~~~I~~aN~~Dla~Ake~GL~~sll~RL~l~~~K~~sl~~g~~~ia~-~edpvGRVl~~~~ladgL~L~ 106 (433)
T KOG4165|consen 28 LHHIADLLVDNEKEILAANKKDLAEAKEAGLAESLLKRLDLSPGKISSLAAGLRQIAE-LEDPVGRVLKKTRLADGLELE 106 (433)
T ss_pred HHHHHHHHHhhHHHHHhcchhhHHHHHhcCccHHHHHHhcCChHHHHHHHHHHHHHHh-cccchhhheeeeeccCCceEE
Confidence 4678888887777666544 44566432211 11345555555665555 3333344332 23455667
Q ss_pred eeecCCceEEEEcCCccchHHHHHhHHHHHhhCCeEEeecCCCChHHHHHHHHHHHHc----CCCCCcEEEEeCCchhhH
Q 015042 67 TLREPVGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLTALYYAHLAKLA----GIPDGVLNVVPGFGPTAG 142 (414)
Q Consensus 67 ~~~~P~Gvv~~i~p~n~P~~~~~~~~~~aLaaGN~vv~kps~~~~~~~~~l~~~l~~a----G~p~g~v~~v~~~~~~~~ 142 (414)
....|+||.++| |......+..-.+-|+++||.+++|....+..+...|.++..++ |.|.+.++++.. ..++.
T Consensus 107 qvt~PiGvLLVI--FESRPd~l~qiasLAi~SgN~llLKGGkEa~~Sn~~L~~~v~~al~~~~~~~~aV~LV~s-REev~ 183 (433)
T KOG4165|consen 107 QVTVPIGVLLVI--FESRPDCLPQIASLAIASGNGLLLKGGKEAAHSNAALHKLVQEALGTHGGPGKAVQLVTS-REEVS 183 (433)
T ss_pred EeeccceEEEEE--eccCchHHHHHHHHHHhcCCeEeecCchhhhhhHHHHHHHHHHHhhhccCchhhhhheec-HHHHH
Confidence 778899999999 88888888888889999999999999999999988888776655 779999999988 66888
Q ss_pred HHhhhCCCccEEEEeCCcHHHHHHHHHHHhcccceeEEEcCCCCCceEcCCCCHHHHHHHHHHHhhccCCCCcccCceEE
Q 015042 143 AAICSHMDIDYVCFTGSTDVGRLVMQAAAASNLKQVSLELGGKSPLLIFDDADLDTAADVALLGNLYNKGEICVASSRVF 222 (414)
Q Consensus 143 ~~l~~~~~v~~v~~tGs~~~g~~i~~~~a~~~~~~~~~e~gg~~~~iV~~dadl~~aa~~i~~~~~~~~Gq~C~a~~~i~ 222 (414)
+.|..+.-||+|+-.||.+-.|.|.... ..|+.....|.+.++|++|||++.|.+-+..+++.+.. .|++.+.++
T Consensus 184 dLl~ld~~IDLvIPRGSs~LVr~Ik~~t----kIPVLGHA~GichvYvd~dad~~kA~riv~DaK~dYPA-aCNAmETLL 258 (433)
T KOG4165|consen 184 DLLKLDDYIDLVIPRGSSDLVRSIKDTT----KIPVLGHAEGICHVYVDKDADLDKAKRIVRDAKCDYPA-ACNAMETLL 258 (433)
T ss_pred HHhhhhhheeEEecCCcHHHHHHHhhcc----cCcccccccceeEEEeccccCHHHHHHHHhcccCCCch-hhhhHHHHh
Confidence 8888888899999999999988887653 38999999999999999999999999988888888876 899999999
Q ss_pred EeCch-HHHHHHHHHHHHhhcccCCCCCCCCcccccCCHHHHHHHHHHHHHHHHcCCEEEeCCcccCCCCceeeeEEEee
Q 015042 223 VQEGI-YDKFEKKLLEKAKAWLVGDPFDPTVRQGPQISERHFDRILSYIEHGKREGATLLTGGKPIGDKGYYIEPTIFTN 301 (414)
Q Consensus 223 V~~~i-~d~f~~~l~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~~~g~~~~Ptvl~~ 301 (414)
+|++. ...|.+.|...++. +|.++.+|.+.. .-.. -
T Consensus 259 Ih~dl~~~~~~~~l~~~l~~----------------------------------~gVtl~agpkl~-~~l~--------~ 295 (433)
T KOG4165|consen 259 IHKDLEQSPFFDDLINMLKE----------------------------------EGVTLHAGPKLA-ALLK--------F 295 (433)
T ss_pred ccHhhhhcchHHHHHHHHHh----------------------------------cCeEEecChhHH-hhcC--------c
Confidence 99983 34444444333321 122222222111 0010 1
Q ss_pred CCCcccccccceecceEEEEeeCCHHHHHHHhhcCCCCceEEEecCCHHHHHHHHHhcceeEEEEcCcCCCCCCCCcccC
Q 015042 302 VKEDMIIAKEEIFGPVMALMKFKTVEEAIKSANNTQYGLAAGIVTKDLNVANTVSRSIRAGIIWINCYFGFSMDCPYGGY 381 (414)
Q Consensus 302 ~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~sv~s~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~p~gG~ 381 (414)
.+|...-++.|.-.-.+++-.+++.++||+.+|..+.+++-+|.|+|.+.+++|...+++..|+.|.++.|..+.-||=-
T Consensus 296 ~p~e~~s~~~Ey~~l~~~ievV~~v~~Ai~HI~~hgS~HTD~IvTe~~~~Ae~Fl~~VDSa~vf~NASTRFaDGfRfGlG 375 (433)
T KOG4165|consen 296 SPPEAKSFNTEYGSLECTIEVVDSVQSAIDHIHTHGSSHTDCIVTENEATAEHFLKHVDSACVFHNASTRFADGFRFGLG 375 (433)
T ss_pred CCchhhhhhhhhcchheeeeecccHHHHHHHHHhcCCcccceEEecCHHHHHHHHhccchhheeeccccccccccccccc
Confidence 13445567889988999999999999999999999999999999999999999999999999999999999988888622
Q ss_pred CCCCCC----ccchHHHHHhhheeeEEEeeC
Q 015042 382 KMSGFG----REYGLESLYKYLQIKSVVTPI 408 (414)
Q Consensus 382 ~~sG~g----~~~g~~~~~~~~~~k~i~~~~ 408 (414)
-+-|.. ...|+.|++-.+.+|++.+..
T Consensus 376 aEVGIST~rIHARGPvGveGLlttkw~lRG~ 406 (433)
T KOG4165|consen 376 AEVGISTSRIHARGPVGVEGLLTTKWLLRGK 406 (433)
T ss_pred ceeeeeccceeccCCccccceeeeeeEEecC
Confidence 223332 366899999999999987643
|
|
| >PF05893 LuxC: Acyl-CoA reductase (LuxC); InterPro: IPR008670 This family consists of several bacterial Acyl-CoA reductase (LuxC) proteins | Back alignment and domain information |
|---|
Probab=99.83 E-value=7.3e-17 Score=159.68 Aligned_cols=278 Identities=19% Similarity=0.175 Sum_probs=199.0
Q ss_pred ccceeecCCceEEEEcCCccchHHHHHhHHHHHhhCCeEEeecCCCChHHHHHHHHHHHHcCCCC----CcEEEE--eCC
Q 015042 64 QGYTLREPVGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLTALYYAHLAKLAGIPD----GVLNVV--PGF 137 (414)
Q Consensus 64 ~~~~~~~P~Gvv~~i~p~n~P~~~~~~~~~~aLaaGN~vv~kps~~~~~~~~~l~~~l~~aG~p~----g~v~~v--~~~ 137 (414)
..+.++.|.|++++|+|.|.|+..+.. ++.+|.+||..|+|+|...+.++..|.+.|.+. .|. ..+.++ ++.
T Consensus 80 ~~~~~~~p~g~v~Hi~agNvp~~~~~S-~~~~lL~gn~nivK~ss~d~~~~~~l~~~l~~~-~~~~~l~~~i~v~~~~~~ 157 (399)
T PF05893_consen 80 DGYVRAFPRGLVFHIAAGNVPLVGFYS-LVRGLLSGNANIVKLSSRDPFLAPALLRSLAEI-DPEHPLADSIAVVYWPGG 157 (399)
T ss_pred cchhhccCCceEEEEcCCCccchHHHH-HHHHHHhCCceEEECCCCchhHHHHHHHHHHhh-CccchhhhcEEEEEecCC
Confidence 477889999999999999999977665 677788999999999999999999999999887 554 456666 454
Q ss_pred chhhHHHhhhCCCccEEEEeCCcHHHHHHHHHHHhcccceeEEEcCCCCCceEcCCCCHHHHHHHHHHHhhccCCCCccc
Q 015042 138 GPTAGAAICSHMDIDYVCFTGSTDVGRLVMQAAAASNLKQVSLELGGKSPLLIFDDADLDTAADVALLGNLYNKGEICVA 217 (414)
Q Consensus 138 ~~~~~~~l~~~~~v~~v~~tGs~~~g~~i~~~~a~~~~~~~~~e~gg~~~~iV~~dadl~~aa~~i~~~~~~~~Gq~C~a 217 (414)
+.++.+.+.. ..|.++.+||.++.+.+.+.. +..++.+....-.+.+++..+++++.+++.++.-.+.+.+|.|.|
T Consensus 158 d~~~~~~~~~--~~D~vv~wGgd~ti~~ir~~~--~~~~~~i~fg~k~S~avi~~~~~~~~~a~~~a~Di~~~dQ~aCsS 233 (399)
T PF05893_consen 158 DEELEEALSQ--QADAVVAWGGDETIRAIRQPL--PPGARLIEFGPKYSFAVIDAEAELEEAARRLANDIFLFDQQACSS 233 (399)
T ss_pred chHHHHHHHH--HCCEEEEeCCHHHHHHHHHHc--CCCCcEeeeCCceEEEEEcCchhHHHHHHHHHHHHHHhhCcccCC
Confidence 5666777764 479999999999999999843 566788888888888999999999999999999999999999999
Q ss_pred CceEEEeC---chHHHHHHHHHHHHhhcccCCCCCCCCcccccCCHHHHHHHHHHHH-----HHHHcCCEEEeCCcccCC
Q 015042 218 SSRVFVQE---GIYDKFEKKLLEKAKAWLVGDPFDPTVRQGPQISERHFDRILSYIE-----HGKREGATLLTGGKPIGD 289 (414)
Q Consensus 218 ~~~i~V~~---~i~d~f~~~l~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~-----~a~~~ga~v~~gg~~~~~ 289 (414)
|+.|||.. .-.++|.++|.+.+++..---|.. ..+.+....+....+ .+...+.++..+...
T Consensus 234 p~~ifv~~g~~~~~~~f~~~L~~~L~~~~~~~p~~-------~~s~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~--- 303 (399)
T PF05893_consen 234 PQVIFVETGDGDSVEEFAERLAEALERAAERYPRG-------ELSIDEAAAISSLRAEAELRYALDGEYRVWSSDDN--- 303 (399)
T ss_pred CeEEEEECCCcccHHHHHHHHHHHHHHHHHhCCCc-------CCCHHHHHHHHHHHHHHHHHHHhcCCcceeecCCC---
Confidence 99999993 336788888877776542211211 112222222222222 244434345422221
Q ss_pred CCceeeeEEEeeCCCcccccccceecceEEEEeeCCHHHHHHHhhcCCCCceEEEecCCHHHHHHHHHhc-ceeEEEE
Q 015042 290 KGYYIEPTIFTNVKEDMIIAKEEIFGPVMALMKFKTVEEAIKSANNTQYGLAAGIVTKDLNVANTVSRSI-RAGIIWI 366 (414)
Q Consensus 290 ~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~sv~s~d~~~~~~~~~~l-~~g~v~i 366 (414)
..||+....+ . .....++=++.|+++++.+|++..++....-.|++++... +...++++.+ ..|.-.|
T Consensus 304 -----~~~V~~~~~~--~-~~~~pl~r~v~v~~v~~~~e~~~~l~~~~~lQTvgi~~~~-~~~~~~~~~l~~~Gv~Ri 372 (399)
T PF05893_consen 304 -----SWTVIVSPEP--P-LLPSPLNRTVYVVPVDSLEELVPYLRPKRGLQTVGIYPWS-ERLEELARALAAAGVDRI 372 (399)
T ss_pred -----CEEEEECCCc--c-cccCCCCCEEEEEEcCCHHHHHHHhhhcCCCeeEEEecCh-hhHHHHHHHHHhcCCeee
Confidence 3456643332 2 2223446689999999999999999887433577886544 5566666644 3454333
|
The channelling of fatty acids into the fatty aldehyde substrate for the bacterial bioluminescence reaction is catalysed by a fatty acid reductase multienzyme complex, which channels fatty acids through the thioesterase (LuxD), synthetase (LuxE) and reductase (LuxC) components [].; GO: 0003995 acyl-CoA dehydrogenase activity, 0008218 bioluminescence, 0055114 oxidation-reduction process |
| >KOG2449 consensus Methylmalonate semialdehyde dehydrogenase [Amino acid transport and metabolism; Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.50 E-value=5.7e-14 Score=113.45 Aligned_cols=146 Identities=27% Similarity=0.363 Sum_probs=116.5
Q ss_pred HHHHHHHHHHHHhhcccCCCCCCCCcccccCCHHHHHHHHHHHHHHHH-cCCEEEeCCcccCCCCceeeeEEEeeCCCcc
Q 015042 228 YDKFEKKLLEKAKAWLVGDPFDPTVRQGPQISERHFDRILSYIEHGKR-EGATLLTGGKPIGDKGYYIEPTIFTNVKEDM 306 (414)
Q Consensus 228 ~d~f~~~l~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~-~ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~ 306 (414)
.....+.|++..+.+++-+...+.+|. .+...++.++++.-.. .|-.+...|. +.|+|..||+|. ++|+|
T Consensus 8 aksW~~~lve~ak~l~v~~g~kp~tD~-----~a~~~ri~~liqS~~~~~~r~~yl~~y---a~~~f~~~tiLs-vtP~m 78 (157)
T KOG2449|consen 8 AKSWHPTLVEDAKVLKVNAGEKPQTDK-----YAPKVRIDKLIQSEDPLDGRFIYLPGY---AEGNFVGPTILS-VTPNM 78 (157)
T ss_pred hhhhhHHHHHhhhheEeccCCCCCccc-----hhHHHHHHHHhcCcCccCCceEEeecc---ccCCcccceEEE-ecCCc
Confidence 345666778888888888777777776 5667777777775211 1223333333 479999999998 99999
Q ss_pred cccccceecceEEEEeeCCHHHHHHHhhcCCCCceEEEecCCHHHHHHHHHhcceeEEEEcCcCC-CCCCCCcccCC
Q 015042 307 IIAKEEIFGPVMALMKFKTVEEAIKSANNTQYGLAAGIVTKDLNVANTVSRSIRAGIIWINCYFG-FSMDCPYGGYK 382 (414)
Q Consensus 307 ~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~sv~s~d~~~~~~~~~~l~~g~v~iN~~~~-~~~~~p~gG~~ 382 (414)
.+..||+||||+..+.-.+++|+|.++|+++||....+||.+.+.++++.+..++|.+-+|.+.. ..+...|.|-+
T Consensus 79 s~ykeeI~gpVlv~l~~~tldd~I~Iin~nPygn~t~i~Tsn~atark~~~e~~a~qig~~~~ip~ilk~~sfsg~~ 155 (157)
T KOG2449|consen 79 SCYKEEIFGPVLVRLETETLDDAIFIINNNPYGNGTAIFTSNGATARKFCHEPDAGQIGANVPIPVILKMFSFSGDR 155 (157)
T ss_pred ceeHhhhhcceEEEEeecCCCceeEEEecCCCCceeEEEecCcHHhhhhhcCCCccceeccccccccccceeccccC
Confidence 99999999999999999999999999999999999999999999999999999999999998643 33445565543
|
|
| >PF07368 DUF1487: Protein of unknown function (DUF1487); InterPro: IPR009961 This family consists of several uncharacterised proteins from Drosophila melanogaster | Back alignment and domain information |
|---|
Probab=99.27 E-value=1.9e-10 Score=102.00 Aligned_cols=164 Identities=20% Similarity=0.234 Sum_probs=125.2
Q ss_pred CceEcCCCCHHHHHHHHHHHhhccCCCCcccCceEEEeCchHHHHHHHHHHHHhhcccCCCCCCCCcccccCCHHHHHHH
Q 015042 187 PLLIFDDADLDTAADVALLGNLYNKGEICVASSRVFVQEGIYDKFEKKLLEKAKAWLVGDPFDPTVRQGPQISERHFDRI 266 (414)
Q Consensus 187 ~~iV~~dadl~~aa~~i~~~~~~~~Gq~C~a~~~i~V~~~i~d~f~~~l~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~ 266 (414)
-+||.+|.|++.|+..++.+.-.--| ..+.-.|+|||+++|+|+++++.+++.+ ++. +.+...+.+.
T Consensus 7 lMIvfe~GDlnsA~~~L~~sl~~Pf~--~~~VatVlVqEsireefi~rvr~~m~pl------~~~-----va~Hpny~rs 73 (215)
T PF07368_consen 7 LMIVFEDGDLNSAMHYLLESLHNPFA--PGAVATVLVQESIREEFIERVRSRMKPL------SPQ-----VANHPNYLRS 73 (215)
T ss_pred EEEEEeCCCHHHHHHHHHHHHhCccc--CCcEEEEEEeHHHHHHHHHHHHHhCccC------Chh-----hccCcHHHHH
Confidence 38999999999999999999755544 5678899999999999999999988654 222 2233344544
Q ss_pred HHHHHHHHHcCCEEEeCCcccCCCCceeeeEEEeeCCCcccccccceecceEEEEeeCCHHHHHHHhhcC-CCCceEEEe
Q 015042 267 LSYIEHGKREGATLLTGGKPIGDKGYYIEPTIFTNVKEDMIIAKEEIFGPVMALMKFKTVEEAIKSANNT-QYGLAAGIV 345 (414)
Q Consensus 267 ~~~i~~a~~~ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~-~~gl~~sv~ 345 (414)
.+.++ ..+++++++.... ....-.|.++.+.+.+.- . +--.+|+++..|++..||+++++.. ...-+.|||
T Consensus 74 l~~i~---~l~~~~I~~~~~~--~~~~aSPilV~d~~h~~f--g-~~PTgViTlhtFRt~~Ea~~l~~kE~l~f~SVsiW 145 (215)
T PF07368_consen 74 LKKIK---CLNAKTIVADFEN--VPPPASPILVCDFTHSYF--G-DGPTGVITLHTFRTPKEAIELCAKETLPFDSVSIW 145 (215)
T ss_pred HHHHH---hcCCeEEEecccC--CCCCCCCEEEcCCCHHHc--C-CCCCeEEEEEccCCHHHHHHHHhcCCCCcceEEEe
Confidence 44444 4678888874332 122348999987765422 2 2444899999999999999999975 333599999
Q ss_pred cCCHHHHHHHHHhcceeEEEEcCcCC
Q 015042 346 TKDLNVANTVSRSIRAGIIWINCYFG 371 (414)
Q Consensus 346 s~d~~~~~~~~~~l~~g~v~iN~~~~ 371 (414)
++..+.+.+++.+|++..++|||...
T Consensus 146 ~ekla~~Yel~~~l~~~~f~iNC~~V 171 (215)
T PF07368_consen 146 NEKLASAYELAARLPCDTFYINCFNV 171 (215)
T ss_pred CcHHHHHHHHHHhCCCCEEEEEeccC
Confidence 99999999999999999999999864
|
The function of this family is unknown. |
| >PRK11905 bifunctional proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=98.57 E-value=4.5e-07 Score=101.16 Aligned_cols=111 Identities=18% Similarity=0.094 Sum_probs=86.9
Q ss_pred ccccCCCcccceeecCCceEEEEcCCccchHHHHHhHHHHHhhCCeEEeecCCCChHHHHHHHHHHHHcCCCCCcEEEEe
Q 015042 56 VLKMSSELQGYTLREPVGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLTALYYAHLAKLAGIPDGVLNVVP 135 (414)
Q Consensus 56 ~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~~~~aLaaGN~vv~kps~~~~~~~~~l~~~l~~aG~p~g~v~~v~ 135 (414)
.++.++|+.+..+..|+|++++++||| ..++.++..||++||+||+||++.++. . .+.+|..+.+.+
T Consensus 1063 ~LPGPTGEsN~L~l~~RG~vlcisp~~---~~~l~Qi~AALaaGn~vi~~~~~~~~~-------~--~~~Lp~~~~~~~- 1129 (1208)
T PRK11905 1063 ELPGPTGESNLLSLHPRGRVLCVADTE---EALLRQLAAALATGNVAVVAADSGLAA-------A--LADLPGLVAARI- 1129 (1208)
T ss_pred cCCCCCCcceeEEecCCceEEEECCcH---HHHHHHHHHHHHhCCEEEEeCCcccHH-------H--HHhCcccccccc-
Confidence 467779999999999999999999999 557789999999999999999988652 1 122565555444
Q ss_pred CCchhhHHHhhhCCCccEEEEeCCcHHHHHHHHHHHhccc--ceeEEEcC
Q 015042 136 GFGPTAGAAICSHMDIDYVCFTGSTDVGRLVMQAAAASNL--KQVSLELG 183 (414)
Q Consensus 136 ~~~~~~~~~l~~~~~v~~v~~tGs~~~g~~i~~~~a~~~~--~~~~~e~g 183 (414)
..+..+..+++|+.|.|+|+.++.+.+.+..+++.+ .|++.|..
T Consensus 1130 ----~~~~~~~~~~~i~~V~~~G~~~~a~~i~~~LA~R~G~Ivpliaet~ 1175 (1208)
T PRK11905 1130 ----DWTQDWEADDPFAGALLEGDAERARAVRQALAARPGAIVPLIAAEP 1175 (1208)
T ss_pred ----ccccccccCCcccEEEEeCCHHHHHHHHHHHHhCCCCcceEEecCC
Confidence 234467788889999999999999999999885543 34555443
|
|
| >PF00815 Histidinol_dh: Histidinol dehydrogenase; InterPro: IPR012131 Histidinol dehydrogenase (HDH) catalyzes the terminal step in the biosynthesis of histidine in bacteria, fungi, and plants, the four-electron oxidation of L-histidinol to histidine | Back alignment and domain information |
|---|
Probab=98.08 E-value=0.0092 Score=58.92 Aligned_cols=263 Identities=21% Similarity=0.182 Sum_probs=126.2
Q ss_pred CCcccceeecCCceEEEEcCC---ccchHHHHHhHHHHHhhCCeEEe--ecCCCChHHHHHHHHHHHHcCCCCCcEEEEe
Q 015042 61 SELQGYTLREPVGVVGHIIPW---NFPTTMFFMKVSPALAAGCTMIV--KPAEQTPLTALYYAHLAKLAGIPDGVLNVVP 135 (414)
Q Consensus 61 ~~~~~~~~~~P~Gvv~~i~p~---n~P~~~~~~~~~~aLaaGN~vv~--kps~~~~~~~~~l~~~l~~aG~p~g~v~~v~ 135 (414)
+|.....++.|+--|++..|. -||. ++++.++||-.+|..=|+ -|+...-.....+......+|.. .+..
T Consensus 96 ~G~~~g~~~~Pi~rvG~YVPGG~a~~pS-tvlM~aiPA~vAGV~~Iv~~TPp~~~G~i~p~vL~Aa~~~Gv~----evy~ 170 (412)
T PF00815_consen 96 PGVILGQRYRPIERVGLYVPGGRAPYPS-TVLMTAIPAKVAGVKEIVVCTPPPKDGKINPAVLAAAHLAGVD----EVYK 170 (412)
T ss_dssp TTEEEEEEEEE-SEEEEE---SSS--TH-HHHHHHHHHHHHT-SEEEEEE-SS------HHHHHHHHHTT-S----EEEE
T ss_pred CCcEEEEEEEEhhheEEEccCCCCCccH-HHHHcccchhhcCCCeEEEEcCCCccCCCCHHHHHHHHHcCCC----EEEe
Confidence 466677889999999999884 3554 344567899999876554 45443223333444455566664 2222
Q ss_pred CCchhhHHHhhh----CCCccEEEEeCCcHHHHHHHHHHHhcccceeEEEcCCCCCceEcCCCCHHHHHHHHHHHhhccC
Q 015042 136 GFGPTAGAAICS----HMDIDYVCFTGSTDVGRLVMQAAAASNLKQVSLELGGKSPLLIFDDADLDTAADVALLGNLYNK 211 (414)
Q Consensus 136 ~~~~~~~~~l~~----~~~v~~v~~tGs~~~g~~i~~~~a~~~~~~~~~e~gg~~~~iV~~dadl~~aa~~i~~~~~~~~ 211 (414)
-.|.....+|.- -|+||.|+=.|+.-+...=..-.. .-..- ...++.---+|-+++||.+..+..++.-+=+..
T Consensus 171 vGGaqAIAAlAyGTeti~~VDkIvGPGN~yV~~AK~~v~g-~V~ID-~~AGPSEv~ViAD~~A~p~~vAaDLLaQAEHd~ 248 (412)
T PF00815_consen 171 VGGAQAIAALAYGTETIPKVDKIVGPGNAYVTAAKRLVFG-DVGID-MIAGPSEVLVIADETANPEFVAADLLAQAEHDP 248 (412)
T ss_dssp --HHHHHHHHHH--SSS---SEEE---SHHHHHHHHHHHH-S-EES-------EEEEEE-TTS-HHHHHHHHHHHHTT-T
T ss_pred cccHHHHHHHHcCCCCCCceeEEECCCcHHHHHHHHHhcC-CcccC-CCCCCCceEEEECCCCCHHHHHHHHHHHhccCC
Confidence 224444444443 488999998888765321111111 10111 111222222455678999999988887665554
Q ss_pred CCCcccCceEEEeCchHHHHHHHHHHHHhhcccCCCCCCCCcccccCCHHHHHHHHHHHHHHHHcCCEEEeCCcccCCCC
Q 015042 212 GEICVASSRVFVQEGIYDKFEKKLLEKAKAWLVGDPFDPTVRQGPQISERHFDRILSYIEHGKREGATLLTGGKPIGDKG 291 (414)
Q Consensus 212 Gq~C~a~~~i~V~~~i~d~f~~~l~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~~~g 291 (414)
. .+.++|..+ +++.+++.+.+.+..-. +...+ .++.+++.|
T Consensus 249 ~-----a~~vLvt~s--~~la~~V~~~v~~~l~~-----------l~r~~-------i~~~sl~~g-------------- 289 (412)
T PF00815_consen 249 D-----AQAVLVTTS--EELAEAVEAEVERQLEE-----------LPRRE-------IAEKSLENG-------------- 289 (412)
T ss_dssp T------EEEEEES---HHHHHHHHHHHHHHHTT------------TTHH-------HHHHHHTT---------------
T ss_pred C-----CceEEEECC--HHHHHHHHHHHHHHHHh-----------CCchH-------HHHHHHHCC--------------
Confidence 3 334666555 45555555554432110 01111 122222211
Q ss_pred ceeeeEEEeeCCCcccccccceecceEEEEeeCCHHHHHHHhhcCCCCceEEEecCCHHHHHHHHHhcc-eeEEEEcCcC
Q 015042 292 YYIEPTIFTNVKEDMIIAKEEIFGPVMALMKFKTVEEAIKSANNTQYGLAAGIVTKDLNVANTVSRSIR-AGIIWINCYF 370 (414)
Q Consensus 292 ~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~sv~s~d~~~~~~~~~~l~-~g~v~iN~~~ 370 (414)
.++.++|++||++++|..-. =-..|.++|+ +.++.+++ +|.|++..++
T Consensus 290 ---------------------------~ii~~~~l~ea~~~~N~~AP-EHLel~~~~~---~~~~~~i~~AGaiFlG~~t 338 (412)
T PF00815_consen 290 ---------------------------AIIVVDSLEEAIELANEYAP-EHLELQVEDP---EELLEKIRNAGAIFLGEYT 338 (412)
T ss_dssp ---------------------------EEEE-SSHHHHHHHHHHH---SEEEEESTTH---HHHGGG--S-SEEEESTT-
T ss_pred ---------------------------eEEEECCHHHHHHHHHHhhH-HHHHHHHcCH---HHHHHHhhccChhhcCCCC
Confidence 35677999999999998432 2457888887 55666775 8999999875
Q ss_pred C---------CCCCCCcccCCCCCCCccchHHHHHhhheeeEEE
Q 015042 371 G---------FSMDCPYGGYKMSGFGREYGLESLYKYLQIKSVV 405 (414)
Q Consensus 371 ~---------~~~~~p~gG~~~sG~g~~~g~~~~~~~~~~k~i~ 405 (414)
. .++-+|-+| ..++.|.-+..+|+++.++.
T Consensus 339 p~a~GDY~aGpNHvLPT~G-----~AR~~sgLsv~~FlK~~s~~ 377 (412)
T PF00815_consen 339 PEALGDYAAGPNHVLPTGG-----TARFSSGLSVDDFLKRISVQ 377 (412)
T ss_dssp -HHHHHHTSSS------TT-----GGGT---S-GGGGEEEEEEE
T ss_pred CHHHhhhccCCCccCCCCc-----cccccCCCcHHHccceeeEE
Confidence 3 234566654 56777778899999987764
|
In 4-electron dehydrogenases, a single active site catalyses 2 separate oxidation steps: oxidation of the substrate alcohol to an intermediate aldehyde; and oxidation of the aldehyde to the product acid, in this case His []. The reaction proceeds via a tightly- or covalently-bound inter-mediate, and requires the presence of 2 NAD molecules []. By contrast with most dehydrogenases, the substrate is bound before the NAD coenzyme []. A Cys residue has been implicated in the catalytic mechanism of the second oxidative step []. In bacteria HDH is a single chain polypeptide; in fungi it is the C-terminal domain of a multifunctional enzyme which catalyzes three different steps of histidine biosynthesis; and in plants it is expressed as nuclear encoded protein precursor which is exported to the chloroplast [].; GO: 0004399 histidinol dehydrogenase activity, 0008270 zinc ion binding, 0051287 NAD binding, 0000105 histidine biosynthetic process, 0055114 oxidation-reduction process; PDB: 1KAE_B 1K75_A 1KAH_A 1KAR_B. |
| >PLN02926 histidinol dehydrogenase | Back alignment and domain information |
|---|
Probab=97.68 E-value=0.018 Score=57.03 Aligned_cols=260 Identities=20% Similarity=0.226 Sum_probs=146.0
Q ss_pred CCcccceeecCCceEEEEcCC---ccchHHHHHhHHHHHhhCCeEEe--ecCCCC-hHHHHHHHHHHHHcCCCCCcEEEE
Q 015042 61 SELQGYTLREPVGVVGHIIPW---NFPTTMFFMKVSPALAAGCTMIV--KPAEQT-PLTALYYAHLAKLAGIPDGVLNVV 134 (414)
Q Consensus 61 ~~~~~~~~~~P~Gvv~~i~p~---n~P~~~~~~~~~~aLaaGN~vv~--kps~~~-~~~~~~l~~~l~~aG~p~g~v~~v 134 (414)
+|.....++.|+.-|++..|. -||. ++++..+||-.+|..=|+ -|+... ......|+ ....+|+. .+.
T Consensus 110 ~Gv~~g~~~~Pi~rvG~YVPGG~a~ypS-tvLM~aiPAkvAGV~~Iv~~TPp~~~g~i~p~iL~-AA~~~Gv~----eIy 183 (431)
T PLN02926 110 PGVRCRRVARPIGAVGLYVPGGTAVLPS-TALMLAVPAQIAGCKTVVLATPPRKDGSICPEVLY-CAKKAGVT----HIL 183 (431)
T ss_pred CCeEEEEEEechHHeeEeccCCCCCccH-HHHHhhcchhhcCCCeEEEEECCCcCCCCCHHHHH-HHHHcCCC----eee
Confidence 455667888999999999997 3554 445568899999876544 444321 12223333 44566655 222
Q ss_pred eCCchhhHHHhh----hCCCccEEEEeCCcHHHHHHHHHHHhcc--ccee-EEEcCCCCCceEcCCCCHHHHHHHHHHHh
Q 015042 135 PGFGPTAGAAIC----SHMDIDYVCFTGSTDVGRLVMQAAAASN--LKQV-SLELGGKSPLLIFDDADLDTAADVALLGN 207 (414)
Q Consensus 135 ~~~~~~~~~~l~----~~~~v~~v~~tGs~~~g~~i~~~~a~~~--~~~~-~~e~gg~~~~iV~~dadl~~aa~~i~~~~ 207 (414)
.-.|.....+|. .-|+||.|+=.|+.-+.. +++..+.. +.-+ ...++.---+|-+++||.+.++..++.-+
T Consensus 184 ~vGGaQAIAAlAyGTetIp~VDkIvGPGN~yV~~--AK~~v~G~~~~VgID~~AGPSEvlIiAD~tA~p~~vAaDLLaQA 261 (431)
T PLN02926 184 KAGGAQAIAAMAWGTDSCPKVDKIFGPGNQYVTA--AKMILQNSEAMVSIDMPAGPSEVLVIADKTANPVHVAADLLSQA 261 (431)
T ss_pred ccCCHHHHHHHHcCCCCCCCCCEEECCCcHHHHH--HHHHhhCCCCccccCCCCCCceeEEEeCCCCCHHHHHHHHHHHh
Confidence 222444444443 346899998888775432 11111000 0000 01111222234455689999988887665
Q ss_pred hccCCCCcccCceEEEeCc--hHHHHHHHHHHHHhhcccCCCCCCCCcccccCCHHHHHHHHHHHHHHHHcCCEEEeCCc
Q 015042 208 LYNKGEICVASSRVFVQEG--IYDKFEKKLLEKAKAWLVGDPFDPTVRQGPQISERHFDRILSYIEHGKREGATLLTGGK 285 (414)
Q Consensus 208 ~~~~Gq~C~a~~~i~V~~~--i~d~f~~~l~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ga~v~~gg~ 285 (414)
=+... .+.++|..+ +.++..+.+.++++.+. .. +.++.++..|
T Consensus 262 EHdp~-----a~aiLvT~s~~la~~V~~~v~~ql~~l~---------------r~-------~i~~~sl~~g-------- 306 (431)
T PLN02926 262 EHGPD-----SQVVLVAVGDVDLDAIEEEVEKQCQSLP---------------RG-------EIASKALGHS-------- 306 (431)
T ss_pred ccCCC-----CcEEEEECCHHHHHHHHHHHHHHHHhCC---------------hH-------HHHHHHHHCC--------
Confidence 55443 344666555 23444444433333320 01 1222222211
Q ss_pred ccCCCCceeeeEEEeeCCCcccccccceecceEEEEeeCCHHHHHHHhhcCCCCceEEEecCCHHHHHHHHHhcc-eeEE
Q 015042 286 PIGDKGYYIEPTIFTNVKEDMIIAKEEIFGPVMALMKFKTVEEAIKSANNTQYGLAAGIVTKDLNVANTVSRSIR-AGII 364 (414)
Q Consensus 286 ~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~sv~s~d~~~~~~~~~~l~-~g~v 364 (414)
.++.++|++||++++|..-. =...|.++|+ +.+..+++ +|.|
T Consensus 307 ---------------------------------~iivv~~l~ea~~~~N~~AP-EHLei~~~~~---~~~l~~i~nAGai 349 (431)
T PLN02926 307 ---------------------------------FIVVARDMAEAISFSNLYAP-EHLIVNVEDA---ESWLDKIDNAGSV 349 (431)
T ss_pred ---------------------------------EEEEECCHHHHHHHHHhhCh-HhheehhcCH---HHHHhhcCcccee
Confidence 35677999999999997432 2345778887 45566665 8999
Q ss_pred EEcCcCC---------CCCCCCcccCCCCCCCccchHHHHHhhheeeEEE
Q 015042 365 WINCYFG---------FSMDCPYGGYKMSGFGREYGLESLYKYLQIKSVV 405 (414)
Q Consensus 365 ~iN~~~~---------~~~~~p~gG~~~sG~g~~~g~~~~~~~~~~k~i~ 405 (414)
++..++. .++-+|-| |.+++.|.-+..+|+++.++.
T Consensus 350 FlG~~sp~a~GDY~aGpNHvLPT~-----G~AR~~sgLsv~~FlK~~s~~ 394 (431)
T PLN02926 350 FLGRWTPESVGDYASGTNHVLPTY-----GYARMYGGVSLDSFLKYMTVQ 394 (431)
T ss_pred ccCCCCchhhhccccCcCcccCCC-----cceeecCCCcHHHhcceeeEE
Confidence 9976543 22345554 456777777888998876654
|
|
| >PRK00877 hisD bifunctional histidinal dehydrogenase/ histidinol dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=97.65 E-value=0.025 Score=56.03 Aligned_cols=260 Identities=22% Similarity=0.207 Sum_probs=146.6
Q ss_pred CCcccceeecCCceEEEEcCC---ccchHHHHHhHHHHHhhCCeEEe--ecCCCChHHHHHHHHHHHHcCCCCCcEEEEe
Q 015042 61 SELQGYTLREPVGVVGHIIPW---NFPTTMFFMKVSPALAAGCTMIV--KPAEQTPLTALYYAHLAKLAGIPDGVLNVVP 135 (414)
Q Consensus 61 ~~~~~~~~~~P~Gvv~~i~p~---n~P~~~~~~~~~~aLaaGN~vv~--kps~~~~~~~~~l~~~l~~aG~p~g~v~~v~ 135 (414)
.|.....++.|+--|++..|. -||. ++++..+||-.+|..=|+ -|+.... ....+.-+...+|+.+ +..
T Consensus 110 ~Gv~~g~~~~Pi~~vG~YVPGG~a~ypS-tvLM~aiPAkvAGV~~Iv~~TPp~~g~-i~p~vL~AA~~~Gv~e----Iy~ 183 (425)
T PRK00877 110 PGVRLGQRWRPIERVGLYVPGGKAAYPS-SVLMNAIPAKVAGVKEIVMVTPPPDGE-INPAILAAAALAGVDE----VYK 183 (425)
T ss_pred CCeEEEEEEEehHHeEEEccCCCCCchH-HHHHhhcchhhcCCCeEEEEeCCCCCC-CCHHHHHHHHHcCCCe----eec
Confidence 455666788999999999887 3554 444568899999976554 4443111 2222333445666552 222
Q ss_pred CCchhhHHHhh----hCCCccEEEEeCCcHHHHHHHHHHHhcc-cceeEEEcCCCCCceEcCCCCHHHHHHHHHHHhhcc
Q 015042 136 GFGPTAGAAIC----SHMDIDYVCFTGSTDVGRLVMQAAAASN-LKQVSLELGGKSPLLIFDDADLDTAADVALLGNLYN 210 (414)
Q Consensus 136 ~~~~~~~~~l~----~~~~v~~v~~tGs~~~g~~i~~~~a~~~-~~~~~~e~gg~~~~iV~~dadl~~aa~~i~~~~~~~ 210 (414)
-.|.....+|. +-|+||.|+=.|+.-+.. +++..+.. ..- ...++.---+|-+++||.+..+..++.-+=+.
T Consensus 184 vGGAQAIAAlAyGTetIp~VDkIvGPGN~yV~~--AK~~v~g~V~ID-~~AGPSEvlViAD~~Anp~~vAaDLLaQAEHd 260 (425)
T PRK00877 184 VGGAQAIAALAYGTESIPKVDKIVGPGNIYVTA--AKRLVFGVVGID-MIAGPSEILVIADETADPDFVAADLLSQAEHD 260 (425)
T ss_pred cCCHHHHHHHHcCCCCCCCCcEEECCCcHHHHH--HHHHHcCCcCcC-CCCCCceeEEEeCCCCCHHHHHHHHHHHhccC
Confidence 22444444443 346899998888775432 12111010 111 11111222234455689999998888665554
Q ss_pred CCCCcccCceEEEeCc--hHHHHHHHHHHHHhhcccCCCCCCCCcccccCCHHHHHHHHHHHHHHHHcCCEEEeCCcccC
Q 015042 211 KGEICVASSRVFVQEG--IYDKFEKKLLEKAKAWLVGDPFDPTVRQGPQISERHFDRILSYIEHGKREGATLLTGGKPIG 288 (414)
Q Consensus 211 ~Gq~C~a~~~i~V~~~--i~d~f~~~l~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~ 288 (414)
.. .+.++|..+ +.++..+.+.+++..+. .. +.++.++++
T Consensus 261 ~~-----a~aiLvT~s~~la~~V~~~v~~ql~~l~---------------r~-------~ia~~sl~~------------ 301 (425)
T PRK00877 261 PD-----AQSILVTTSEELAEAVAAEVERQLATLP---------------RA-------EIARASLEG------------ 301 (425)
T ss_pred CC-----CcEEEEECCHHHHHHHHHHHHHHHHhCC---------------hH-------HHHHHHHHh------------
Confidence 33 345666554 23444444444333220 11 122223221
Q ss_pred CCCceeeeEEEeeCCCcccccccceecceEEEEeeCCHHHHHHHhhcCCCCceEEEecCCHHHHHHHHHhcc-eeEEEEc
Q 015042 289 DKGYYIEPTIFTNVKEDMIIAKEEIFGPVMALMKFKTVEEAIKSANNTQYGLAAGIVTKDLNVANTVSRSIR-AGIIWIN 367 (414)
Q Consensus 289 ~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~sv~s~d~~~~~~~~~~l~-~g~v~iN 367 (414)
+| .++.++|+|||++++|..-. =-..|.++|+ ..++.+++ +|.|++.
T Consensus 302 -------------------------~g---~iivv~~leeai~~~N~~AP-EHLel~~~~p---~~~l~~I~nAGaiFlG 349 (425)
T PRK00877 302 -------------------------QG---AIILVDDLEEAIELSNAYAP-EHLEIQTEDP---RALLDRIRNAGAIFLG 349 (425)
T ss_pred -------------------------CC---EEEEECCHHHHHHHHHhhCh-HheeehhCCH---HHHHhhcCccceeccC
Confidence 11 24577999999999997432 2346778887 44556665 8999997
Q ss_pred CcCC---------CCCCCCcccCCCCCCCccchHHHHHhhheeeEEE
Q 015042 368 CYFG---------FSMDCPYGGYKMSGFGREYGLESLYKYLQIKSVV 405 (414)
Q Consensus 368 ~~~~---------~~~~~p~gG~~~sG~g~~~g~~~~~~~~~~k~i~ 405 (414)
.++. .++-+|- +|..++.+.-++.+|+++.++.
T Consensus 350 ~~tp~a~GDY~aGpNHvLPT-----~G~AR~~sgLsV~~F~K~~s~~ 391 (425)
T PRK00877 350 PYTPESLGDYAAGPNHVLPT-----SGTARFSSGLSVYDFLKRSSVI 391 (425)
T ss_pred CCCchhhhhcccCCCcccCC-----CcceeecCCccHHHhccceeEE
Confidence 7643 1234554 4567777778899999887764
|
|
| >TIGR00069 hisD histidinol dehydrogenase | Back alignment and domain information |
|---|
Probab=97.62 E-value=0.081 Score=51.93 Aligned_cols=260 Identities=20% Similarity=0.213 Sum_probs=147.7
Q ss_pred CCcccceeecCCceEEEEcCCc---cchHHHHHhHHHHHhhCCeEEe--ecCCC-ChHHHHHHHHHHHHcCCCCCcEEEE
Q 015042 61 SELQGYTLREPVGVVGHIIPWN---FPTTMFFMKVSPALAAGCTMIV--KPAEQ-TPLTALYYAHLAKLAGIPDGVLNVV 134 (414)
Q Consensus 61 ~~~~~~~~~~P~Gvv~~i~p~n---~P~~~~~~~~~~aLaaGN~vv~--kps~~-~~~~~~~l~~~l~~aG~p~g~v~~v 134 (414)
.|.....++.|+--|++..|.= ||. ++++..+||-.+|..=|+ -|+.. .......|+ ....+|+.+ +.
T Consensus 78 ~Gv~~g~~~~Pi~rvGlYVPGG~a~~pS-tvLM~aiPAkvAGV~~Iv~~TPp~~~g~i~p~iL~-AA~~~Gv~e----Iy 151 (393)
T TIGR00069 78 PGVILGQRVRPLERVGLYVPGGRAPYPS-TVLMTAIPAKVAGVKEIVVCTPPGKDGKINPAVLA-AAKLAGVDE----VY 151 (393)
T ss_pred CCeEEEEEEEEeheEEEEeCCCCCcchH-HHHHhhcchhhcCCCeEEEEeCCCcCCCCCHHHHH-HHHHcCCCe----eh
Confidence 4566678889999999999873 444 444567899999976554 44422 112222233 446666652 22
Q ss_pred eCCchhhHHHhh----hCCCccEEEEeCCcHHHHHHHHHHHh-cccceeEEEcCCCCCceEcCCCCHHHHHHHHHHHhhc
Q 015042 135 PGFGPTAGAAIC----SHMDIDYVCFTGSTDVGRLVMQAAAA-SNLKQVSLELGGKSPLLIFDDADLDTAADVALLGNLY 209 (414)
Q Consensus 135 ~~~~~~~~~~l~----~~~~v~~v~~tGs~~~g~~i~~~~a~-~~~~~~~~e~gg~~~~iV~~dadl~~aa~~i~~~~~~ 209 (414)
.-.|.....+|. .-|+||.|+=.|+.-+.. +++..+ .-..- ...++.--.+|-+++||.+..+..++.-+=+
T Consensus 152 ~vGGAQAIAAlAyGTesIp~VDkIvGPGN~yV~~--AK~~v~g~V~ID-~~AGPSEvlViAD~~Anp~~iAaDLLaQAEH 228 (393)
T TIGR00069 152 KVGGAQAIAALAYGTETVPKVDKIVGPGNIYVTA--AKKLVFGDVGID-MPAGPSEVLVIADETANPEFVAADLLSQAEH 228 (393)
T ss_pred hcCCHHHHHHHHcCCCCCCCCcEEECCCcHHHHH--HHHHhcCccCcC-CCCCCceEEEEeCCCCCHHHHHHHHHHHhcc
Confidence 222444334442 346899998888775432 122110 00011 1111222224455678999998888766544
Q ss_pred cCCCCcccCceEEEeCc--hHHHHHHHHHHHHhhcccCCCCCCCCcccccCCHHHHHHHHHHHHHHHHcCCEEEeCCccc
Q 015042 210 NKGEICVASSRVFVQEG--IYDKFEKKLLEKAKAWLVGDPFDPTVRQGPQISERHFDRILSYIEHGKREGATLLTGGKPI 287 (414)
Q Consensus 210 ~~Gq~C~a~~~i~V~~~--i~d~f~~~l~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ga~v~~gg~~~ 287 (414)
... .+.++|..+ +.++..+.+.++++.+. .. +.++.++.+.
T Consensus 229 d~~-----a~~iLvT~s~~la~~V~~~v~~ql~~l~---------------r~-------~i~~~al~~~---------- 271 (393)
T TIGR00069 229 DPD-----AQAILVTTSEELAEAVQEEIERQLATLP---------------RR-------EIARKSLEDN---------- 271 (393)
T ss_pred CCC-----CcEEEEECCHHHHHHHHHHHHHHHHhCC---------------hH-------HHHHHHHHhC----------
Confidence 432 344666544 34444444444443321 11 2222333210
Q ss_pred CCCCceeeeEEEeeCCCcccccccceecceEEEEeeCCHHHHHHHhhcCCCCceEEEecCCHHHHHHHHHhcc-eeEEEE
Q 015042 288 GDKGYYIEPTIFTNVKEDMIIAKEEIFGPVMALMKFKTVEEAIKSANNTQYGLAAGIVTKDLNVANTVSRSIR-AGIIWI 366 (414)
Q Consensus 288 ~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~sv~s~d~~~~~~~~~~l~-~g~v~i 366 (414)
-.++.++|++||++++|..-.= -..|.++|+ ..+..+++ +|.|++
T Consensus 272 ------------------------------g~ii~v~~l~ea~~~~N~~APE-HLel~~~~p---~~~l~~I~nAGaiFl 317 (393)
T TIGR00069 272 ------------------------------GAIILVDDLEEAIEISNDYAPE-HLELQTKNP---EELLPKIRNAGSIFL 317 (393)
T ss_pred ------------------------------CEEEEECCHHHHHHHHHhhChH-hheehhCCH---HHHHhhcCccceecc
Confidence 0245779999999999984322 345777887 45566665 899999
Q ss_pred cCcCC---------CCCCCCcccCCCCCCCccchHHHHHhhheeeEEE
Q 015042 367 NCYFG---------FSMDCPYGGYKMSGFGREYGLESLYKYLQIKSVV 405 (414)
Q Consensus 367 N~~~~---------~~~~~p~gG~~~sG~g~~~g~~~~~~~~~~k~i~ 405 (414)
..++. .++-+|-| |..++.+.-++.+|+++.++.
T Consensus 318 G~~tp~a~GDY~aG~NHvLPT~-----G~Ar~~sgL~v~~F~K~~s~~ 360 (393)
T TIGR00069 318 GPYTPEAAGDYAAGPNHVLPTG-----GTARFYSGLSVLDFLKRITVQ 360 (393)
T ss_pred CCCCchhhhhccCCCCcccCCC-----cceeecCCccHHHhccceeEE
Confidence 87653 22345554 566777777888998887764
|
This model describes a polypeptide sequence catalyzing the final step in histidine biosynthesis, found sometimes as an independent protein and sometimes as a part of a multifunctional protein. |
| >PRK13769 histidinol dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.62 E-value=0.062 Score=52.26 Aligned_cols=250 Identities=20% Similarity=0.172 Sum_probs=140.9
Q ss_pred CCcccceeecCCceEEEEcCCccchHHHHHhHHHHHhhCCeEEeecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchh
Q 015042 61 SELQGYTLREPVGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLTALYYAHLAKLAGIPDGVLNVVPGFGPT 140 (414)
Q Consensus 61 ~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~~~~aLaaGN~vv~kps~~~~~~~~~l~~~l~~aG~p~g~v~~v~~~~~~ 140 (414)
+|.....++.|+--|++..|.-||. ++++..+||-.+|..=|+--+|-.......|+ ....+|.. .+..-.|..
T Consensus 83 ~Gv~~g~~~~Pi~rvG~YVPa~~pS-tvLM~~iPAkvAGV~~Iv~~TPp~~i~p~vL~-aa~~~Gv~----eIy~vGGAQ 156 (368)
T PRK13769 83 GGVLRSVFWKPVRRAALYVPARYVS-TLVMLAVPARAAGVEEIYVVTPPRGVTGELLA-VAKELGVK----GVLAIGGPH 156 (368)
T ss_pred CCeEEEEEEeeeeeeEEEeccchHH-HHHHhhccHhhcCCCeEEEeCCCCCCCHHHHH-HHHHcCCC----eeecccCHH
Confidence 5566677899999999999965554 45566889999998765543332112222233 44566655 222222444
Q ss_pred hHHHhhhCCCccEEEEeCCcHHHHHHHHHHHhcccceeEEEcCCCCCceEcCCCCHHHHHHHHHHHhhccCCCCcccCce
Q 015042 141 AGAAICSHMDIDYVCFTGSTDVGRLVMQAAAASNLKQVSLELGGKSPLLIFDDADLDTAADVALLGNLYNKGEICVASSR 220 (414)
Q Consensus 141 ~~~~l~~~~~v~~v~~tGs~~~g~~i~~~~a~~~~~~~~~e~gg~~~~iV~~dadl~~aa~~i~~~~~~~~Gq~C~a~~~ 220 (414)
...++...-++|.|+=.|+.-+.. +++.. ....-+=+-.|--.-+|+-+++|.+..+..++.-+=+... .+.
T Consensus 157 AIAa~a~gt~VDkIvGPGN~yV~~--AK~~v-~g~V~ID~~AGPSEvlViAD~a~p~~vAaDLLaQAEH~~~-----a~~ 228 (368)
T PRK13769 157 GLAYAVFHMGVDMVAGPGGLYVQA--AKYVL-SQYVGIDGIEGPTELVVYAEGVPPEVAVRGALAQLEHGPT-----SFA 228 (368)
T ss_pred HHHHHhcCCCcCEEECCCcHHHHH--HHHHH-hCCcCCCCcCCCcceEEEcCCCCHHHHHHHHHHHhhcCCC-----CcE
Confidence 444555555789888888775432 11111 0111111112223335555668888877777654443322 344
Q ss_pred EEEeCchHHHHHHHHHHHHhhcccCCCCCCCCcccccCCHHHHHHHHHHHHHHHHcCCEEEeCCcccCCCCceeeeEEEe
Q 015042 221 VFVQEGIYDKFEKKLLEKAKAWLVGDPFDPTVRQGPQISERHFDRILSYIEHGKREGATLLTGGKPIGDKGYYIEPTIFT 300 (414)
Q Consensus 221 i~V~~~i~d~f~~~l~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~~~g~~~~Ptvl~ 300 (414)
++|..+ .++.++..+.+++. +... .|
T Consensus 229 iLvT~s--~~la~~V~~~v~~~---------------------------~~~~--~~----------------------- 254 (368)
T PRK13769 229 YLLSTD--AELLKAAEEIYRRE---------------------------RTSS--MG----------------------- 254 (368)
T ss_pred EEEECC--HHHHHHHHHHHHHH---------------------------HHhc--CC-----------------------
Confidence 566555 45555555554431 0000 00
Q ss_pred eCCCcccccccceecceEEEEeeCCHHHHHHHhhcCCCCceEEEecCCHHHHHHHHHhcc-eeEEEEcCcCCC-------
Q 015042 301 NVKEDMIIAKEEIFGPVMALMKFKTVEEAIKSANNTQYGLAAGIVTKDLNVANTVSRSIR-AGIIWINCYFGF------- 372 (414)
Q Consensus 301 ~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~sv~s~d~~~~~~~~~~l~-~g~v~iN~~~~~------- 372 (414)
. ..++.++|++||++++|..-.= -..|.+ . +.+..+++ +|.|+++.+..+
T Consensus 255 -----------~-----~~iivv~~leeai~~~N~~APE-HLel~~-~----~~~~~~i~nAGsiFl~~p~a~GDY~aGp 312 (368)
T PRK13769 255 -----------P-----LEVRKVAGVEEAVRFIDEIAPE-HLEVWG-R----REVAYRVRNVGAVSVNMPSPYLDYVAGI 312 (368)
T ss_pred -----------C-----CeEEEECCHHHHHHHHHhhChH-heEeeC-c----HHHHhhCCccCChhcCCchhhhccccCC
Confidence 0 2467889999999999984322 223444 2 22455665 899999765332
Q ss_pred CCCCCcccCCCCCCCccchHHHHHhhheeeEEE
Q 015042 373 SMDCPYGGYKMSGFGREYGLESLYKYLQIKSVV 405 (414)
Q Consensus 373 ~~~~p~gG~~~sG~g~~~g~~~~~~~~~~k~i~ 405 (414)
++-+|-| |..++.|.-+..+|+++.++.
T Consensus 313 NHvLPT~-----G~AR~~sgLsv~~FlK~~t~~ 340 (368)
T PRK13769 313 SHVLPTG-----GTARWRGIITPLTFMKPIGVA 340 (368)
T ss_pred CCcCCCC-----cceeccCCCcHHHcccceeEE
Confidence 2345554 456677777788888876654
|
|
| >COG0141 HisD Histidinol dehydrogenase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=97.56 E-value=0.013 Score=57.56 Aligned_cols=260 Identities=21% Similarity=0.262 Sum_probs=147.1
Q ss_pred CCcccceeecCCceEEEEcC---CccchHHHHHhHHHHHhhCCeEE--eecCCCChHHHHHHHHHHHHcCCCCCcEEEEe
Q 015042 61 SELQGYTLREPVGVVGHIIP---WNFPTTMFFMKVSPALAAGCTMI--VKPAEQTPLTALYYAHLAKLAGIPDGVLNVVP 135 (414)
Q Consensus 61 ~~~~~~~~~~P~Gvv~~i~p---~n~P~~~~~~~~~~aLaaGN~vv--~kps~~~~~~~~~l~~~l~~aG~p~g~v~~v~ 135 (414)
.|.....++.|+--|++..| .-||...+ +..+||-.+|+.=| ..|.+..- .+..+.-+...+|+.+ ++.+
T Consensus 106 ~Gv~~g~~~~Pi~~VGlYVPGG~A~ypStvL-M~avPAkvAGv~~Iv~~tPp~~~g-v~p~iL~AA~~~Gv~e-Iy~v-- 180 (425)
T COG0141 106 PGVVLGQRWRPIERVGLYVPGGKAAYPSTVL-MNAVPAKVAGVEEIVVVTPPPKDG-VNPEILAAARLAGVDE-VYKV-- 180 (425)
T ss_pred CCcEEEEEEEEhhheEEEccCCCcCChHHHH-HhhccHhhcCCceEEEECCCCCCC-CCHHHHHHHHHhCcHH-HHHc--
Confidence 56677788999999999888 66666444 45789999998654 34554322 2223333334444431 1111
Q ss_pred CCchhhHHHhhhC----CCccEEEEeCCcHHHHHHHHHHHhcccceeEEEcCCCCC-ceEcCCCCHHHHHHHHHHHhhcc
Q 015042 136 GFGPTAGAAICSH----MDIDYVCFTGSTDVGRLVMQAAAASNLKQVSLELGGKSP-LLIFDDADLDTAADVALLGNLYN 210 (414)
Q Consensus 136 ~~~~~~~~~l~~~----~~v~~v~~tGs~~~g~~i~~~~a~~~~~~~~~e~gg~~~-~iV~~dadl~~aa~~i~~~~~~~ 210 (414)
| |.....+|.-. +.||.|+=.|+.-+.. +++.. ....-+=+..|--.. +|-++++|.+..+..+..-+=++
T Consensus 181 G-GAQAIAAlAYGTetV~~VdkIvGPGN~yVta--AKr~v-~g~V~ID~~AGPSEvlViAD~ta~p~~vA~DLLsQAEHd 256 (425)
T COG0141 181 G-GAQAIAALAYGTETVPKVDKIVGPGNAYVTA--AKRLV-SGVVGIDMIAGPSEVLVIADETANPDFVAADLLSQAEHD 256 (425)
T ss_pred c-CHHHHHHHHccCCcCCccCeeeCCCcHHHHH--HHHHh-hCCcccCCCCCCceEEEEeCCCCCHHHHHHHHHHHhhcC
Confidence 2 44444555554 7899998888776422 12211 111111111222222 34455689999998887766554
Q ss_pred CCCCcccCceEEEeCchHHHHHHHHHHHHhhcccCCCCCCCCcccccCCHHHHHHHHHHHHHHH-HcCCEEEeCCcccCC
Q 015042 211 KGEICVASSRVFVQEGIYDKFEKKLLEKAKAWLVGDPFDPTVRQGPQISERHFDRILSYIEHGK-REGATLLTGGKPIGD 289 (414)
Q Consensus 211 ~Gq~C~a~~~i~V~~~i~d~f~~~l~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~-~~ga~v~~gg~~~~~ 289 (414)
.. .+.|+|..+ ++|.++..+.+.+..-. + .. . +.+..++ ..|
T Consensus 257 ~~-----a~aiLvT~s--~~la~~v~~~v~~~l~~-----------l-~~--~----ei~~~~l~~~g------------ 299 (425)
T COG0141 257 PD-----AQAILVTDS--EELAEAVEAAVERQLET-----------L-PR--A----EIARKALENYG------------ 299 (425)
T ss_pred CC-----ceEEEEeCc--HHHHHHHHHHHHHHHHh-----------c-cH--H----HHHHHHHHhCC------------
Confidence 33 445677655 45555555555432100 0 00 1 1122222 111
Q ss_pred CCceeeeEEEeeCCCcccccccceecceEEEEeeCCHHHHHHHhhcCCCCceEEEecCCHHHHHHHHHhcc-eeEEEEcC
Q 015042 290 KGYYIEPTIFTNVKEDMIIAKEEIFGPVMALMKFKTVEEAIKSANNTQYGLAAGIVTKDLNVANTVSRSIR-AGIIWINC 368 (414)
Q Consensus 290 ~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~sv~s~d~~~~~~~~~~l~-~g~v~iN~ 368 (414)
.|+.++|++|+++++|..-. --..|.++|+. .++.+++ +|.|+++.
T Consensus 300 -----------------------------~iilv~~l~ea~~~~N~~AP-EHLei~~~~p~---~~l~~I~nAGsIFlG~ 346 (425)
T COG0141 300 -----------------------------AIILVDDLDEAVEISNEYAP-EHLELQTENPR---ELLGKIRNAGSIFLGH 346 (425)
T ss_pred -----------------------------eEEEECCHHHHHHHHHhhCh-HhhhhhhcCHH---HHHHHhcccceeeecC
Confidence 35677999999999997422 34567788874 5566665 89999998
Q ss_pred cCC---------CCCCCCcccCCCCCCCccchHHHHHhhheeeEE
Q 015042 369 YFG---------FSMDCPYGGYKMSGFGREYGLESLYKYLQIKSV 404 (414)
Q Consensus 369 ~~~---------~~~~~p~gG~~~sG~g~~~g~~~~~~~~~~k~i 404 (414)
++. .++-+|-+ |+-++.+.-++..|..+-++
T Consensus 347 ~sPe~~GDY~aG~NHVLPT~-----g~AR~~s~L~v~dF~K~~tv 386 (425)
T COG0141 347 YSPESLGDYAAGPNHVLPTS-----GTARFSSGLSVYDFLKRSTV 386 (425)
T ss_pred CCCccccccccCCCccCCCC-----ccchhcCCccHHHhhhHHHH
Confidence 653 23445554 45555666667777665443
|
|
| >cd06572 Histidinol_dh Histidinol dehydrogenase, HisD, E | Back alignment and domain information |
|---|
Probab=97.54 E-value=0.11 Score=51.29 Aligned_cols=263 Identities=21% Similarity=0.187 Sum_probs=145.4
Q ss_pred CCcccceeecCCceEEEEcCCc-cchH-HHHHhHHHHHhhCCeEEe--ecCCCChHHHHHHHHHHHHcCCCCCcEEEEeC
Q 015042 61 SELQGYTLREPVGVVGHIIPWN-FPTT-MFFMKVSPALAAGCTMIV--KPAEQTPLTALYYAHLAKLAGIPDGVLNVVPG 136 (414)
Q Consensus 61 ~~~~~~~~~~P~Gvv~~i~p~n-~P~~-~~~~~~~~aLaaGN~vv~--kps~~~~~~~~~l~~~l~~aG~p~g~v~~v~~ 136 (414)
.|.....++.|+--|++..|.= +|+. ++++..+||-.+|..=|+ -|+...-.....+.-....+|.. .+..-
T Consensus 82 ~G~~~g~~~~Pi~~vG~YVPGG~a~ypStvLM~aiPAkvAGV~~Iv~~TPp~~~g~i~p~iL~aa~~~Gv~----eiy~v 157 (390)
T cd06572 82 PGVVLGQRYRPIERVGLYVPGGTAPYPSTVLMLAIPAKVAGVKEIVVVTPPRKDGKINPAILAAAKLAGVD----EIYKV 157 (390)
T ss_pred CCcEEEEEEEehhEEEEEecCCCCcchHHHHHhhcchhhcCCCeEEEEeCcCCCCCCCHHHHHHHHHcCCc----EEecc
Confidence 4667778899999898888865 3333 444567899999976554 44432111222222234555554 22222
Q ss_pred CchhhHHHhh----hCCCccEEEEeCCcHHHHHHHHHHHhcccceeEEEcCCCCCceEcCCCCHHHHHHHHHHHhhccCC
Q 015042 137 FGPTAGAAIC----SHMDIDYVCFTGSTDVGRLVMQAAAASNLKQVSLELGGKSPLLIFDDADLDTAADVALLGNLYNKG 212 (414)
Q Consensus 137 ~~~~~~~~l~----~~~~v~~v~~tGs~~~g~~i~~~~a~~~~~~~~~e~gg~~~~iV~~dadl~~aa~~i~~~~~~~~G 212 (414)
.|.....+|. ..|.||.|+=.|..-+.. +++..+....-=...++.---+|-+++||.+..+..++.-+=+..-
T Consensus 158 GGaQAIAAlAyGTesi~~VDkIvGPGN~yV~~--AK~~v~g~V~ID~~AGPSEvlIiAD~~A~p~~vAaDLLaQAEH~~~ 235 (390)
T cd06572 158 GGAQAIAALAYGTETIPKVDKIVGPGNIYVTA--AKRLVSGDVGIDMPAGPSEVLVIADETANPEFVAADLLSQAEHDPD 235 (390)
T ss_pred CCHHHHHHHHcCCcCCCCCCEeeCCchHHHHH--HHHHhcCCcCccCCCCCceEEEEeCCCCCHHHHHHHHHhhhccCCC
Confidence 2444444443 367899998888765432 1111100000000111222224455668999988888765544322
Q ss_pred CCcccCceEEEeCc--hHHHHHHHHHHHHhhcccCCCCCCCCcccccCCHHHHHHHHHHHHHHHHcCCEEEeCCcccCCC
Q 015042 213 EICVASSRVFVQEG--IYDKFEKKLLEKAKAWLVGDPFDPTVRQGPQISERHFDRILSYIEHGKREGATLLTGGKPIGDK 290 (414)
Q Consensus 213 q~C~a~~~i~V~~~--i~d~f~~~l~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~~~ 290 (414)
.+.++|..+ ..++..+.+.++++.+. ..+ .++.+..+
T Consensus 236 -----a~aiLvT~s~~la~~V~~~v~~ql~~l~---------------r~~-------~~~~~~~~-------------- 274 (390)
T cd06572 236 -----SQAILVTTSEELAEAVEEEVERQLAELP---------------RRE-------IAAKSLLD-------------- 274 (390)
T ss_pred -----CeEEEEECCHHHHHHHHHHHHHHHHhCC---------------cHH-------HHHHHHHh--------------
Confidence 344666554 23444444444433321 011 11111111
Q ss_pred CceeeeEEEeeCCCcccccccceecceEEEEeeCCHHHHHHHhhcCCCCceEEEecCCHHHHHHHHHhcc-eeEEEEcCc
Q 015042 291 GYYIEPTIFTNVKEDMIIAKEEIFGPVMALMKFKTVEEAIKSANNTQYGLAAGIVTKDLNVANTVSRSIR-AGIIWINCY 369 (414)
Q Consensus 291 g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~sv~s~d~~~~~~~~~~l~-~g~v~iN~~ 369 (414)
+ -.++.++|++|+++++|..-. =..-|.++|++. +..+++ +|.|++..+
T Consensus 275 -----------------------~---g~ii~~~~~~eai~~~N~~AP-EHLel~~~~~~~---~l~~i~nAGsiFlG~~ 324 (390)
T cd06572 275 -----------------------Y---GAIILVDDLEEAIELANEYAP-EHLELQTEDPEE---LLEKIRNAGSIFLGPY 324 (390)
T ss_pred -----------------------C---CEEEEECCHHHHHHHHHhhch-hhheeHhcCHHH---HHhhCccceEEeecCC
Confidence 0 135677999999999997432 244677888744 556664 899999886
Q ss_pred CC---------CCCCCCcccCCCCCCCccchHHHHHhhheeeEEE
Q 015042 370 FG---------FSMDCPYGGYKMSGFGREYGLESLYKYLQIKSVV 405 (414)
Q Consensus 370 ~~---------~~~~~p~gG~~~sG~g~~~g~~~~~~~~~~k~i~ 405 (414)
+. .++-+|.+| ..++.+..+...|+++.++.
T Consensus 325 tp~a~GDY~aGpNHvLPT~G-----~Ar~~sgL~v~~F~K~~s~~ 364 (390)
T cd06572 325 TPEALGDYAAGPNHVLPTGG-----TARFYSGLSVDDFLKRITVQ 364 (390)
T ss_pred CchhhhccccCCCCccCCCc-----ceeecCCCCHHHheecceeE
Confidence 43 234466654 56666677788888877654
|
C 1.1.1.23. Histidinol dehydrogenase catalyzes the last two steps in the L-histidine biosynthesis pathway, which is conserved in bacteria, archaea, fungi, and plants. These last two steps are (i) the NAD-dependent oxidation of L-histidinol to L-histidinaldehyde, and (ii) the NAD-dependent oxidation of L-histidinaldehyde to L-histidine. In most fungi and in the unicellular choanoflagellate Monosiga bevicollis, the HisD domain is fused with units that catalyze the second and third biosynthesis steps in this same pathway. |
| >PRK13770 histidinol dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.48 E-value=0.048 Score=53.83 Aligned_cols=260 Identities=17% Similarity=0.171 Sum_probs=145.7
Q ss_pred CCcccceeecCCceEEEEcCCc---cchHHHHHhHHHHHhhCCeEEe--ecCCCChHHHHHHHHHHHHcCCCCCcEEEEe
Q 015042 61 SELQGYTLREPVGVVGHIIPWN---FPTTMFFMKVSPALAAGCTMIV--KPAEQTPLTALYYAHLAKLAGIPDGVLNVVP 135 (414)
Q Consensus 61 ~~~~~~~~~~P~Gvv~~i~p~n---~P~~~~~~~~~~aLaaGN~vv~--kps~~~~~~~~~l~~~l~~aG~p~g~v~~v~ 135 (414)
++.....+..|+--|++..|.= ||. ++++..+||-.+|..=|+ -|++... ....+.-....+|+. .+..
T Consensus 100 ~gv~~g~~~~Pi~rvGlYVPGG~a~ypS-tvLM~aiPAkvAGV~~Iv~~TPp~~~~-i~p~iL~Aa~~~Gv~----eIy~ 173 (416)
T PRK13770 100 ESVECYEIYHPLESVGIYVPGGKASYPS-TVLMTATLAQVAGVENIVVVTPPQPNG-VSQEVLAACYITQVN----QVFQ 173 (416)
T ss_pred CCcEEEEEEeeeeeeEEEccCCCCCccH-HHHHhhccHhhcCCCeEEEEeCcCCCC-CCHHHHHHHHHcCCC----eeec
Confidence 4555667888999999988863 554 444568899999987654 4443211 222222344556654 2222
Q ss_pred CCchhhHHHhh----hCCCccEEEEeCCcHHHHHHHHHHHh-cccceeEEEcCCCCCceEcCCCCHHHHHHHHHHHhhcc
Q 015042 136 GFGPTAGAAIC----SHMDIDYVCFTGSTDVGRLVMQAAAA-SNLKQVSLELGGKSPLLIFDDADLDTAADVALLGNLYN 210 (414)
Q Consensus 136 ~~~~~~~~~l~----~~~~v~~v~~tGs~~~g~~i~~~~a~-~~~~~~~~e~gg~~~~iV~~dadl~~aa~~i~~~~~~~ 210 (414)
-.|.....+|. .-|+||.|+=.|..-+.. +++..+ .-..- ...++.--.+|-+++||.+..+..++.-+=+.
T Consensus 174 iGGAQAIAAlAyGTetIp~VDkIvGPGN~yV~~--AK~~v~g~V~ID-~~AGPSEvlViAD~~Anp~~iAaDLLaQAEHd 250 (416)
T PRK13770 174 VGGAQSIAALTYGTETIPKVDKIVGPGNQFVAY--AKKYLFGQVGID-QIAGPTEIALIIDETADLDAIVYDVFAQAEHD 250 (416)
T ss_pred cCCHHHHHHHHcCCCCCCCCcEEECCCcHHHHH--HHHHhcCCcCcC-CCCCCceeEEEecCCCCHHHHHHHHHHHhccC
Confidence 22444333432 346899998888765422 111110 00111 11112222244556789999988887655444
Q ss_pred CCCCcccCceEEEeCc--hHHHHHHHHHHHHhhcccCCCCCCCCcccccCCHHHHHHHHHHHHHHHHcCCEEEeCCcccC
Q 015042 211 KGEICVASSRVFVQEG--IYDKFEKKLLEKAKAWLVGDPFDPTVRQGPQISERHFDRILSYIEHGKREGATLLTGGKPIG 288 (414)
Q Consensus 211 ~Gq~C~a~~~i~V~~~--i~d~f~~~l~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~ 288 (414)
.. .+.++|..+ +.++..+.+..++..+. .. +.++.++++
T Consensus 251 ~~-----a~~iLvT~s~~la~~V~~ev~~ql~~lp---------------r~-------~i~~~al~~------------ 291 (416)
T PRK13770 251 EL-----ARTYVISEDAQVLKDLESRIAKALPNVD---------------RY-------DIVSKSIAN------------ 291 (416)
T ss_pred CC-----CcEEEEeCCHHHHHHHHHHHHHHHHhCC---------------hH-------HHHHHHHHh------------
Confidence 32 344666444 34444444444443331 11 122223321
Q ss_pred CCCceeeeEEEeeCCCcccccccceecceEEEEeeCCHHHHHHHhhcCCCCceEEEecCCHHHHHHHHHhcc-eeEEEEc
Q 015042 289 DKGYYIEPTIFTNVKEDMIIAKEEIFGPVMALMKFKTVEEAIKSANNTQYGLAAGIVTKDLNVANTVSRSIR-AGIIWIN 367 (414)
Q Consensus 289 ~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~sv~s~d~~~~~~~~~~l~-~g~v~iN 367 (414)
+ -.++.++|++||++++|..-.= -..|.++|+ ..+..+++ +|.|++.
T Consensus 292 -------------------------~---g~ii~v~~~eeai~~~N~~APE-HLel~~~~~---~~~l~~i~nAGaiFlG 339 (416)
T PRK13770 292 -------------------------Q---HYLIHASNFDEACHVMNTIAPE-HASIQTVNP---QPYIEKVKYVGALFIG 339 (416)
T ss_pred -------------------------C---CEEEEECCHHHHHHHHHhhChH-hheehhCCH---HHHHhhCCEeceeccC
Confidence 0 1245679999999999984322 345777887 45666675 8999998
Q ss_pred CcCC---------CCCCCCcccCCCCCCCccchHHHHHhhheeeEEE
Q 015042 368 CYFG---------FSMDCPYGGYKMSGFGREYGLESLYKYLQIKSVV 405 (414)
Q Consensus 368 ~~~~---------~~~~~p~gG~~~sG~g~~~g~~~~~~~~~~k~i~ 405 (414)
.++. .++-+|-| |..++.+.-++..|+++.++.
T Consensus 340 ~~sp~a~GDY~aGpNHvLPT~-----G~AR~~sgLsv~~FlK~~s~~ 381 (416)
T PRK13770 340 HYSPEVIGDYVAGPSHVLPTN-----RTARFTNGLSVNDFLTRNTVI 381 (416)
T ss_pred CCCchhhhccccCCCCcCCCC-----cceeccCCCcHHHeecceeeE
Confidence 7643 22345554 456666667788898877654
|
|
| >PRK12447 histidinol dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=97.26 E-value=0.25 Score=49.18 Aligned_cols=260 Identities=17% Similarity=0.136 Sum_probs=145.8
Q ss_pred CCcccceeecCCceEEEEcCC---ccchHHHHHhHHHHHhhCCeEEe--ecCCCChHHHHHHHHHHHHcCCCCCcEEEEe
Q 015042 61 SELQGYTLREPVGVVGHIIPW---NFPTTMFFMKVSPALAAGCTMIV--KPAEQTPLTALYYAHLAKLAGIPDGVLNVVP 135 (414)
Q Consensus 61 ~~~~~~~~~~P~Gvv~~i~p~---n~P~~~~~~~~~~aLaaGN~vv~--kps~~~~~~~~~l~~~l~~aG~p~g~v~~v~ 135 (414)
.|.....++.|+--|++..|. -||. ++++..+||-.+|..=|+ -|+.........|+ ....+|+. .+..
T Consensus 105 ~Gv~~g~~~~Pl~rvG~YVPGG~a~ypS-tvLM~aiPAkvAGV~~Iv~~TPp~~~~i~p~iL~-Aa~~~Gv~----eIy~ 178 (426)
T PRK12447 105 PGVILGHRNIPVNSVGCYVPGGRYPLVA-SAHMSVLTAKVAGVKRVIACTPPFPGEPPPAIVA-AMHLAGAD----EIYV 178 (426)
T ss_pred CCeEEEEEEeehheEEEEeCCCCCcchH-HHHHhhcchhhcCCCeEEEEeCCCCCCCCHHHHH-HHHHcCCC----eehh
Confidence 455566788999999998886 3444 444568899999986554 44432112222333 34556554 2222
Q ss_pred CCchhhHHHhh----hCCCccEEEEeCCcHHHHHHHHHHHh-cccceeEEEcCCCCCceEcCCCCHHHHHHHHHHHhhcc
Q 015042 136 GFGPTAGAAIC----SHMDIDYVCFTGSTDVGRLVMQAAAA-SNLKQVSLELGGKSPLLIFDDADLDTAADVALLGNLYN 210 (414)
Q Consensus 136 ~~~~~~~~~l~----~~~~v~~v~~tGs~~~g~~i~~~~a~-~~~~~~~~e~gg~~~~iV~~dadl~~aa~~i~~~~~~~ 210 (414)
-.|.....+|. +-|.||.|+=.|..-+.. +++..+ .-..- ...++.---+|-+++||.+..+..++.-+=+.
T Consensus 179 vGGAQAIAAlAyGTetIp~VDkIvGPGN~yV~~--AK~~v~g~V~ID-~~AGPSEvlViAD~~Anp~~vAaDLLaQAEHd 255 (426)
T PRK12447 179 LGGVQAVAAMAYGTETIKPVDMLVGPGNAYVAE--AKRQLFGRVGID-LFAGPTETLVIADDTADPELVATDLLGQAEHG 255 (426)
T ss_pred cCCHHHHHHHHcCCCCCCCCcEEECCCcHHHHH--HHHHhcCccCcC-CCCCCceeEEEeCCCCCHHHHHHHHHHHhccC
Confidence 22444334442 346899998888776432 121110 00111 11111222244455789999988887665554
Q ss_pred CCCCcccCceEEEeCc--hHHHHHHHHHHHHhhcccCCCCCCCCcccccCCHHHHHHHHHHHHHHHHcCCEEEeCCcccC
Q 015042 211 KGEICVASSRVFVQEG--IYDKFEKKLLEKAKAWLVGDPFDPTVRQGPQISERHFDRILSYIEHGKREGATLLTGGKPIG 288 (414)
Q Consensus 211 ~Gq~C~a~~~i~V~~~--i~d~f~~~l~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~ 288 (414)
.. .+.++|..+ +.++..+.+.++++.+ | .. +.++.++++
T Consensus 256 ~~-----a~~iLvT~s~~la~~V~~~v~~ql~~l-------------~--r~-------~i~~~sl~~------------ 296 (426)
T PRK12447 256 PN-----SPAVLITTSRKLAEEVLAEIERLLAIL-------------P--TA-------DVASAAWRD------------ 296 (426)
T ss_pred CC-----CceEEEECCHHHHHHHHHHHHHHHHhC-------------C--HH-------HHHHHHHHh------------
Confidence 33 344666544 2344444444443332 1 11 222223321
Q ss_pred CCCceeeeEEEeeCCCcccccccceecceEEEEeeCCHHHHHHHhhcCCCCceEEEecCCHHHHHHHHHhcc-eeEEEEc
Q 015042 289 DKGYYIEPTIFTNVKEDMIIAKEEIFGPVMALMKFKTVEEAIKSANNTQYGLAAGIVTKDLNVANTVSRSIR-AGIIWIN 367 (414)
Q Consensus 289 ~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~sv~s~d~~~~~~~~~~l~-~g~v~iN 367 (414)
+| .++.++|++||++++|..-.= -..|.++|+ ..+..+++ +|.|++.
T Consensus 297 -------------------------~g---~ii~v~~l~ea~~~~N~~APE-HLel~~~~~---~~~l~~i~nAGaiFlG 344 (426)
T PRK12447 297 -------------------------YG---EVILCDDLEEMVAEADRYASE-HVQVMTEDP---DWFLENMTNYGALFLG 344 (426)
T ss_pred -------------------------CC---EEEEECCHHHHHHHHHhhChH-heeehhCCH---HHHHhhcCccceeccC
Confidence 00 245779999999999984322 345778887 45666665 8999997
Q ss_pred CcCC---------CCCCCCcccCCCCCCCccchHHHHHhhheeeEEE
Q 015042 368 CYFG---------FSMDCPYGGYKMSGFGREYGLESLYKYLQIKSVV 405 (414)
Q Consensus 368 ~~~~---------~~~~~p~gG~~~sG~g~~~g~~~~~~~~~~k~i~ 405 (414)
.++. .++-+|-| |..++.+.-+..+|+++.++.
T Consensus 345 ~~sp~a~GDY~aGpNHvLPT~-----G~Ar~~sgLsv~~FlK~~s~~ 386 (426)
T PRK12447 345 ERTNVAYGDKVIGTNHVLPTS-----GAARYTGGLWVGKFLKTVTYQ 386 (426)
T ss_pred CCCchhhhhcccCCCcccCCC-----cceeecCCCcHHHhccceeEE
Confidence 6543 12345554 566777777888998876654
|
|
| >PRK11809 putA trifunctional transcriptional regulator/proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=96.89 E-value=0.0037 Score=70.68 Aligned_cols=104 Identities=15% Similarity=0.080 Sum_probs=77.7
Q ss_pred ccccCCCcccceeecCCceEEEEcCCccchHHHHHhHHHHHhhCCeEEeecCCCChHHHHHHHHHHHHcCCCCCcEEEEe
Q 015042 56 VLKMSSELQGYTLREPVGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLTALYYAHLAKLAGIPDGVLNVVP 135 (414)
Q Consensus 56 ~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~~~~aLaaGN~vv~kps~~~~~~~~~l~~~l~~aG~p~g~v~~v~ 135 (414)
.+++++|+.+.....|+|+|+++++..- ..+.++..+|++||.+|+..++. ....+ +++|+.+.+.+.
T Consensus 1172 ~LPGPTGE~N~l~l~pRg~vLcl~~~~~---~~~~Ql~Aala~Gn~~v~~~~~~---~~~~~------~~Lp~~v~~~v~ 1239 (1318)
T PRK11809 1172 LLPGPTGERNTYTLLPRERVLCLADTEQ---DALTQLAAVLAVGSQALWPDDAL---HRALV------AALPAAVQARIQ 1239 (1318)
T ss_pred cCCCCCCCcceeeccCCCcEEEeCCCHH---HHHHHHHHHHHhCCEEEEeCCch---hHHHH------HhccHHHHhHhh
Confidence 5677899999999999999999987433 67889999999999998865543 11212 458888877653
Q ss_pred CCchhhHHHhhhCCCccEEEEeCCcHHHHHHHHHHHhccc
Q 015042 136 GFGPTAGAAICSHMDIDYVCFTGSTDVGRLVMQAAAASNL 175 (414)
Q Consensus 136 ~~~~~~~~~l~~~~~v~~v~~tGs~~~g~~i~~~~a~~~~ 175 (414)
- . .........++.|.|.|..+..+.+.++.+.+.+
T Consensus 1240 ~---~-~~~~~~~~~~~avl~~G~~~~l~~~~~~LA~R~G 1275 (1318)
T PRK11809 1240 L---A-KDWQLADQPFDAVLFHGDSDQLRALCEQVAQRDG 1275 (1318)
T ss_pred h---c-cccccccCCccEEEEeCCHHHHHHHHHHHhcCCC
Confidence 2 1 1222234569999999999999999988884444
|
|
| >COG4230 Delta 1-pyrroline-5-carboxylate dehydrogenase [Energy production and conversion] | Back alignment and domain information |
|---|
Probab=91.87 E-value=1.7 Score=44.44 Aligned_cols=109 Identities=17% Similarity=0.153 Sum_probs=73.9
Q ss_pred ccccCCCcccceeecCCceEEEEcCCccchHHHHHhHHHHHhhCCeEEeecCCCChHHHHHHHHHHHHcCCCCCcEEEEe
Q 015042 56 VLKMSSELQGYTLREPVGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLTALYYAHLAKLAGIPDGVLNVVP 135 (414)
Q Consensus 56 ~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~~~~aLaaGN~vv~kps~~~~~~~~~l~~~l~~aG~p~g~v~~v~ 135 (414)
.++.++|..++....|.|-|+++.+ +....+.+++.+|++||.+++.+.......... +|..+-..+.
T Consensus 628 ~LpGptGErN~~~l~pr~rvl~~~~---~~~~~~~ql~a~la~G~~~v~~~~~~~aa~~~~---------l~~~v~~~~~ 695 (769)
T COG4230 628 LLPGPTGERNTYTLHPRGRVLCVAG---DEQDLLTQLAAVLAVGNQVVIPEDSGLAALLKD---------LPSAVASRIQ 695 (769)
T ss_pred ecCCCcccceeecccCCccEEEeCC---CHHHHHHHHHHHHhcCCeEEecCcchHHHHHHh---------chhhhhhhee
Confidence 4556688999999999999999977 667888899999999999999776532222111 4443322221
Q ss_pred CCchhhHHHhhhCCCccEEEEeCCcHHHHHHHHHHHhcccceeEEEc
Q 015042 136 GFGPTAGAAICSHMDIDYVCFTGSTDVGRLVMQAAAASNLKQVSLEL 182 (414)
Q Consensus 136 ~~~~~~~~~l~~~~~v~~v~~tGs~~~g~~i~~~~a~~~~~~~~~e~ 182 (414)
- ...+ ...-.++.+.|.|..+..+.+.+..+ ....|++.-.
T Consensus 696 ~----~~~~-~~~~~~~~vl~~gd~~~~r~~~~~iA-~~~Gpiv~~~ 736 (769)
T COG4230 696 V----AKDW-TADIPFDAVLFHGDSDRLRALCEAIA-ARDGPIVSVQ 736 (769)
T ss_pred e----ccch-hhccceeeEEecCCHHHHHHHHHHHh-cCCCCeEEee
Confidence 1 1122 23345799999999998888888776 4444544433
|
|
| >KOG2450 consensus Aldehyde dehydrogenase [Energy production and conversion] | Back alignment and domain information |
|---|
Probab=82.34 E-value=0.3 Score=49.14 Aligned_cols=139 Identities=12% Similarity=0.047 Sum_probs=91.8
Q ss_pred EEeCchHHHHHHHHHHHHhhcccCCCCCCCCcccccCCHHHHHHHHHHHHHHHHcCCEEEeCCcccCCCCceeeeEEEee
Q 015042 222 FVQEGIYDKFEKKLLEKAKAWLVGDPFDPTVRQGPQISERHFDRILSYIEHGKREGATLLTGGKPIGDKGYYIEPTIFTN 301 (414)
Q Consensus 222 ~V~~~i~d~f~~~l~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~~~g~~~~Ptvl~~ 301 (414)
-|++.-.++.-+++++.-+.++. .+.+. .+..++.++...+.+.++++..++...... +.|-.+.++...+
T Consensus 51 ~v~~~~~~dVd~aV~aAr~Af~~-------~~W~~-~~~~~R~~~L~~~Adlie~~~~~lA~~E~~-d~GKp~~~a~~~D 121 (501)
T KOG2450|consen 51 KVAEATEEDVDEAVKAARSAFKL-------VDWAK-RDAAERGRLLRKLADLIEQDADVLAALEVL-DNGKPYPEALVSD 121 (501)
T ss_pred EeccccHHHHHHHHHHHHHhcCc-------Ccccc-CCHHHHHHHHHHHHHHHHhhhHHHhhhccc-ccCCcchhhhhcC
Confidence 44555556655555444443432 12222 356677888888888888887777766654 3677888888778
Q ss_pred CCCcccccccceecceEE---EEeeCCHHHHHHHhhcCCCCc--eEEEec-CCHHHHHHHHHhcceeEEEEcCcCC
Q 015042 302 VKEDMIIAKEEIFGPVMA---LMKFKTVEEAIKSANNTQYGL--AAGIVT-KDLNVANTVSRSIRAGIIWINCYFG 371 (414)
Q Consensus 302 ~~~~~~~~~~E~fgPvl~---v~~~~~~~eai~~~n~~~~gl--~~sv~s-~d~~~~~~~~~~l~~g~v~iN~~~~ 371 (414)
+++....++ .|++..- .....+..+.+.+.+..+.|. ..+.|. .=.-.+.+++-.|.+|+++||.+..
T Consensus 122 l~~~~~~~r--y~ag~ad~~~~~~~~~~~~~~~yt~~eP~GV~G~I~pWN~Pllm~awKlaPALa~GNtvV~Kpae 195 (501)
T KOG2450|consen 122 LPPAIDCFR--YYAGWADKIHGSTIPTDGEFFAYTRREPIGVCGQIIPWNFPLLMQAWKLAPALAAGNTVVLKPAE 195 (501)
T ss_pred chhhhhHHH--hhccchhhcccccCCCCCceEEEecCCcceeeeEeccCchHHHHHHHhhhhHHhhCcEEEecCCC
Confidence 887766655 5554442 334455667788888899994 555565 3344668899999999999998754
|
|
Homologous Structure Templates
Structure Templates Detected by BLAST
Original result of BLAST against Protein Data Bank
| ID | Alignment Graph | Length |
Definition |
E-value | |
| Query | 414 | ||||
| 1bxs_A | 501 | Sheep Liver Class 1 Aldehyde Dehydrogenase With Nad | 1e-118 | ||
| 1bi9_A | 499 | Retinal Dehydrogenase Type Two With Nad Bound Lengt | 1e-114 | ||
| 1o05_A | 500 | Apo Form Of Human Mitochondrial Aldehyde Dehydrogen | 1e-114 | ||
| 1cw3_A | 494 | Human Mitochondrial Aldehyde Dehydrogenase Complexe | 1e-113 | ||
| 1o9j_A | 501 | The X-Ray Crystal Structure Of Eta-Crystallin Lengt | 1e-113 | ||
| 3n81_A | 500 | T244a Mutant Of Human Mitochondrial Aldehyde Dehydr | 1e-113 | ||
| 2onn_A | 500 | Arg475gln Mutant Of Human Mitochondrial Aldehyde De | 1e-113 | ||
| 4fr8_A | 500 | Crystal Structure Of Human Aldehyde Dehydrogenase-2 | 1e-113 | ||
| 1nzw_A | 500 | Cys302ser Mutant Of Human Mitochondrial Aldehyde De | 1e-112 | ||
| 3n80_A | 500 | Human Mitochondrial Aldehyde Dehydrogenase, Apo For | 1e-112 | ||
| 1zum_A | 500 | Human Mitochondrial Aldehyde Dehydrogenase Asian Va | 1e-112 | ||
| 3inl_A | 500 | Human Mitochondrial Aldehyde Dehydrogenase Asian Va | 1e-110 | ||
| 1ag8_A | 499 | Aldehyde Dehydrogenase From Bovine Mitochondria Len | 1e-110 | ||
| 2o2p_A | 517 | Crystal Structure Of The C-Terminal Domain Of Rat 1 | 2e-89 | ||
| 3rhm_A | 517 | Crystal Structure Of The E673q Mutant Of C-Terminal | 4e-89 | ||
| 3rhj_A | 517 | Crystal Structure Of The E673a Mutant Of The C-Term | 8e-89 | ||
| 3rhr_A | 517 | Crystal Structure Of The C707a Mutant Of The C-Term | 2e-88 | ||
| 4gnz_A | 517 | Crystal Structure Of The C707s Mutant Of C-terminal | 3e-88 | ||
| 3rhl_A | 517 | Crystal Structure Of The E673aC707A DOUBLE MUTANT O | 1e-87 | ||
| 2wox_A | 489 | Betaine Aldehyde Dehydrogenase From Pseudomonas Aer | 3e-84 | ||
| 2wme_A | 490 | Crystallographic Structure Of Betaine Aldehyde Dehy | 3e-84 | ||
| 2xdr_A | 489 | Crystallographic Structure Of Betaine Aldehyde Dehy | 2e-83 | ||
| 3zqa_A | 490 | Crystallographic Structure Of Betaine Aldehyde Dehy | 4e-83 | ||
| 2wme_C | 490 | Crystallographic Structure Of Betaine Aldehyde Dehy | 7e-83 | ||
| 4a0m_A | 496 | Crystal Structure Of Betaine Aldehyde Dehydrogenase | 9e-82 | ||
| 4i8p_A | 520 | Crystal Structure Of Aminoaldehyde Dehydrogenase 1a | 3e-80 | ||
| 3ed6_A | 520 | 1.7 Angstrom Resolution Crystal Structure Of Betain | 8e-76 | ||
| 3iwj_A | 503 | Crystal Structure Of Aminoaldehyde Dehydrogenase 2 | 9e-76 | ||
| 3u4j_A | 528 | Crystal Structure Of Nad-Dependent Aldehyde Dehydro | 6e-75 | ||
| 1a4s_A | 503 | Betaine Aldehyde Dehydrogenase From Cod Liver Lengt | 6e-75 | ||
| 3ek1_A | 504 | Crystal Structure Of Aldehyde Dehydrogenase From Br | 2e-74 | ||
| 3r31_A | 517 | Crystal Structure Of Betaine Aldehyde Dehydrogenase | 2e-74 | ||
| 3iwk_A | 503 | Crystal Structure Of Aminoaldehyde Dehydrogenase 1 | 4e-74 | ||
| 2d4e_A | 515 | Crystal Structure Of The Hpcc From Thermus Thermoph | 3e-73 | ||
| 3b4w_A | 495 | Crystal Structure Of Mycobacterium Tuberculosis Ald | 5e-73 | ||
| 4i9b_A | 517 | Structure Of Aminoaldehyde Dehydrogenase 1 From Sol | 6e-70 | ||
| 4i8q_A | 514 | Structure Of The Aminoaldehyde Dehydrogenase 1 E260 | 4e-69 | ||
| 3jz4_C | 481 | Crystal Structure Of E. Coli Nadp Dependent Enzyme | 1e-68 | ||
| 3jz4_A | 481 | Crystal Structure Of E. Coli Nadp Dependent Enzyme | 1e-68 | ||
| 1wnb_A | 495 | Escherichia Coli Ydcw Gene Product Is A Medium-Chai | 8e-67 | ||
| 3ty7_A | 478 | Crystal Structure Of Aldehyde Dehydrogenase Family | 1e-66 | ||
| 3ifg_A | 484 | Crystal Structure Of Succinate-Semialdehyde Dehydro | 4e-66 | ||
| 4dal_A | 498 | Crystal Structure Of Putative Aldehyde Dehydrogenas | 1e-65 | ||
| 2w8n_A | 487 | The Crytal Structure Of The Oxidized Form Of Human | 1e-62 | ||
| 2w8p_A | 487 | The Crystal Structure Of Human C340a Ssadh Length = | 1e-61 | ||
| 3i44_A | 497 | Crystal Structure Of Aldehyde Dehydrogenase From Ba | 1e-60 | ||
| 2opx_A | 479 | Crystal Structure Of Lactaldehyde Dehydrogenase Fro | 7e-60 | ||
| 2imp_A | 479 | Crystal Structure Of Lactaldehyde Dehydrogenase Fro | 2e-59 | ||
| 2hg2_A | 479 | Structure Of Lactaldehyde Dehydrogenase Length = 47 | 3e-59 | ||
| 3k2w_A | 497 | Crystal Structure Of Betaine-Aldehyde Dehydrogenase | 4e-58 | ||
| 3rh9_A | 506 | The Crystal Structure Of Oxidoreductase From Marino | 2e-55 | ||
| 3qan_A | 538 | Crystal Structure Of 1-Pyrroline-5-Carboxylate Dehy | 4e-51 | ||
| 1t90_A | 486 | Crystal Structure Of Methylmalonate Semialdehyde De | 3e-50 | ||
| 3rjl_A | 538 | Crystal Structure Of 1-Pyrroline-5-Carboxylate Dehy | 3e-49 | ||
| 3r64_A | 508 | Crystal Structure Of A Nad-Dependent Benzaldehyde D | 1e-48 | ||
| 3pqa_A | 486 | Crystal Structure Of Glyceraldehyde-3-Phosphate Deh | 5e-47 | ||
| 4f9i_A | 1026 | Crystal Structure Of Proline Utilization A (Puta) F | 2e-45 | ||
| 1uzb_A | 516 | 1-pyrroline-5-carboxylate Dehydrogenase Length = 51 | 2e-44 | ||
| 2bhp_A | 516 | Crystal Analysis Of 1-Pyrroline-5-Carboxylate Dehyd | 2e-44 | ||
| 1euh_A | 475 | Apo Form Of A Nadp Dependent Aldehyde Dehydrogenase | 2e-43 | ||
| 3prl_A | 505 | Crystal Structure Of Nadp-Dependent Glyceraldehyde- | 2e-43 | ||
| 2bja_A | 516 | Crystal Analysis Of 1-Pyrroline-5-Carboxylate Dehyd | 4e-43 | ||
| 2id2_A | 475 | Gapn T244s Mutant X-Ray Structure At 2.5 A Length = | 4e-43 | ||
| 2esd_A | 475 | Crystal Structure Of Thioacylenzyme Intermediate Of | 9e-43 | ||
| 4dng_A | 485 | Crystal Structure Of Putative Aldehyde Dehydrogenas | 1e-42 | ||
| 1qi1_A | 475 | Ternary Complex Of An Nadp Dependent Aldehyde Dehyd | 3e-42 | ||
| 2jg7_A | 510 | Crystal Structure Of Seabream Antiquitin And Elucid | 1e-40 | ||
| 3ros_A | 484 | Crystal Structure Of Nad-Dependent Aldehyde Dehydro | 6e-40 | ||
| 1ky8_A | 501 | Crystal Structure Of The Non-Phosphorylating Glycer | 7e-38 | ||
| 1uxv_A | 501 | Structural Basis For Allosteric Regulation And Subs | 1e-37 | ||
| 1uxn_A | 501 | Structural Basis For Allosteric Regulation And Subs | 3e-37 | ||
| 3haz_A | 1001 | Crystal Structure Of Bifunctional Proline Utilizati | 2e-36 | ||
| 4h7n_A | 474 | The Structure Of Putative Aldehyde Dehydrogenase Pu | 2e-36 | ||
| 3efv_A | 462 | Crystal Structure Of A Putative Succinate-Semialdeh | 9e-36 | ||
| 4e4g_A | 521 | Crystal Structure Of Putative Methylmalonate-Semial | 5e-35 | ||
| 2j6l_A | 500 | Structure Of Aminoadipate-Semialdehyde Dehydrogenas | 8e-35 | ||
| 3lv1_A | 457 | Benzaldehyde Dehydrogenase, A Class 3 Aldehyde Dehy | 2e-29 | ||
| 3ju8_A | 490 | Crystal Structure Of Succinylglutamic Semialdehyde | 1e-28 | ||
| 3sza_A | 469 | Crystal Structure Of Human Aldh3a1 - Apo Form Lengt | 2e-28 | ||
| 3lns_A | 457 | Benzaldehyde Dehydrogenase, A Class 3 Aldehyde Dehy | 4e-28 | ||
| 1ad3_A | 452 | Class 3 Aldehyde Dehydrogenase Complex With Nicotin | 1e-27 | ||
| 3v9g_A | 566 | Crystal Structure Of Human 1-Pyrroline-5-Carboxylat | 2e-23 | ||
| 3v9h_A | 566 | Crystal Structure Of Human 1-Pyrroline-5-Carboxylat | 5e-23 | ||
| 3v9j_A | 563 | Crystal Structure Of Mouse 1-Pyrroline-5-Carboxylat | 5e-23 | ||
| 3v9i_A | 566 | Crystal Structure Of Human 1-Pyrroline-5-Carboxylat | 1e-22 | ||
| 2y51_A | 534 | Crystal Structure Of E167a Mutant Of The Box Pathwa | 5e-11 | ||
| 2y53_A | 534 | Crystal Structure Of E257q Mutant Of The Box Pathwa | 5e-11 | ||
| 2vro_A | 532 | Crystal Structure Of Aldehyde Dehydrogenase From Bu | 6e-11 | ||
| 2y52_A | 534 | Crystal Structure Of E496a Mutant Of The Box Pathwa | 6e-11 | ||
| 2y5d_A | 534 | Crystal Structure Of C296a Mutant Of The Box Pathwa | 1e-09 | ||
| 3v4c_A | 528 | Crystal Structure Of A Semialdehyde Dehydrogenase F | 3e-04 |
| >pdb|1BXS|A Chain A, Sheep Liver Class 1 Aldehyde Dehydrogenase With Nad Bound Length = 501 | Back alignment and structure |
|
| >pdb|1BI9|A Chain A, Retinal Dehydrogenase Type Two With Nad Bound Length = 499 | Back alignment and structure |
|
| >pdb|1O05|A Chain A, Apo Form Of Human Mitochondrial Aldehyde Dehydrogenase Length = 500 | Back alignment and structure |
|
| >pdb|1CW3|A Chain A, Human Mitochondrial Aldehyde Dehydrogenase Complexed With Nad+ And Mn2+ Length = 494 | Back alignment and structure |
|
| >pdb|1O9J|A Chain A, The X-Ray Crystal Structure Of Eta-Crystallin Length = 501 | Back alignment and structure |
|
| >pdb|3N81|A Chain A, T244a Mutant Of Human Mitochondrial Aldehyde Dehydrogenase, Apo Form Length = 500 | Back alignment and structure |
|
| >pdb|2ONN|A Chain A, Arg475gln Mutant Of Human Mitochondrial Aldehyde Dehydrogenase, Apo Form Length = 500 | Back alignment and structure |
|
| >pdb|4FR8|A Chain A, Crystal Structure Of Human Aldehyde Dehydrogenase-2 In Complex With Nitroglycerin Length = 500 | Back alignment and structure |
|
| >pdb|1NZW|A Chain A, Cys302ser Mutant Of Human Mitochondrial Aldehyde Dehydrogenase Complexed With Nadh And Mg2+ Length = 500 | Back alignment and structure |
|
| >pdb|3N80|A Chain A, Human Mitochondrial Aldehyde Dehydrogenase, Apo Form Length = 500 | Back alignment and structure |
|
| >pdb|1ZUM|A Chain A, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant, Aldh22, Apo Form Length = 500 | Back alignment and structure |
|
| >pdb|3INL|A Chain A, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant, Aldh22, Complexed With Agonist Alda-1 Length = 500 | Back alignment and structure |
|
| >pdb|1AG8|A Chain A, Aldehyde Dehydrogenase From Bovine Mitochondria Length = 499 | Back alignment and structure |
|
| >pdb|2O2P|A Chain A, Crystal Structure Of The C-Terminal Domain Of Rat 10'formyltetrahydrofolate Dehydrogenase Length = 517 | Back alignment and structure |
|
| >pdb|3RHM|A Chain A, Crystal Structure Of The E673q Mutant Of C-Terminal Domain Of 10'formyltetrahydrofolate Dehydrogenase Length = 517 | Back alignment and structure |
|
| >pdb|3RHJ|A Chain A, Crystal Structure Of The E673a Mutant Of The C-Terminal Domain Of Rat 10'formyltetrahydrofolate Dehydrogenase In Complex With Co-Purified Nadp Length = 517 | Back alignment and structure |
|
| >pdb|3RHR|A Chain A, Crystal Structure Of The C707a Mutant Of The C-Terminal Domain Of 10'formyltetrahydrofolate Dehydrogenase In Complex With Nadph Length = 517 | Back alignment and structure |
|
| >pdb|4GNZ|A Chain A, Crystal Structure Of The C707s Mutant Of C-terminal Domain Of 10'formyltetrahydrofolate Dehydrogenase In Complex With Nadp Length = 517 | Back alignment and structure |
|
| >pdb|3RHL|A Chain A, Crystal Structure Of The E673aC707A DOUBLE MUTANT OF THE C-Terminal Domain Of Rat 10'formyltetrahydrofolate Dehydrogenase In Complex With Co-Purified Nadp Length = 517 | Back alignment and structure |
|
| >pdb|2WOX|A Chain A, Betaine Aldehyde Dehydrogenase From Pseudomonas Aeruginosa With Nad(P)h-Catalytic Thiol Adduct. Length = 489 | Back alignment and structure |
|
| >pdb|2WME|A Chain A, Crystallographic Structure Of Betaine Aldehyde Dehydrogenase From Pseudomonas Aeruginosa Length = 490 | Back alignment and structure |
|
| >pdb|2XDR|A Chain A, Crystallographic Structure Of Betaine Aldehyde Dehydrogenase Mutant E252a From Pseudomonas Aeruginosa Length = 489 | Back alignment and structure |
|
| >pdb|3ZQA|A Chain A, Crystallographic Structure Of Betaine Aldehyde Dehydrogenase Mutant C286a From Pseudomonas Aeruginosa In Complex With Nadph Length = 490 | Back alignment and structure |
|
| >pdb|2WME|C Chain C, Crystallographic Structure Of Betaine Aldehyde Dehydrogenase From Pseudomonas Aeruginosa Length = 490 | Back alignment and structure |
|
| >pdb|4A0M|A Chain A, Crystal Structure Of Betaine Aldehyde Dehydrogenase From Spinach In Complex With Nad Length = 496 | Back alignment and structure |
|
| >pdb|4I8P|A Chain A, Crystal Structure Of Aminoaldehyde Dehydrogenase 1a From Zea Mays (zmamadh1a) Length = 520 | Back alignment and structure |
|
| >pdb|3ED6|A Chain A, 1.7 Angstrom Resolution Crystal Structure Of Betaine Aldehyde Dehydrogenase (Betb) From Staphylococcus Aureus Length = 520 | Back alignment and structure |
|
| >pdb|3IWJ|A Chain A, Crystal Structure Of Aminoaldehyde Dehydrogenase 2 From Pisum Sativum (Psamadh2) Length = 503 | Back alignment and structure |
|
| >pdb|3U4J|A Chain A, Crystal Structure Of Nad-Dependent Aldehyde Dehydrogenase From Sinorhizobium Meliloti Length = 528 | Back alignment and structure |
|
| >pdb|1A4S|A Chain A, Betaine Aldehyde Dehydrogenase From Cod Liver Length = 503 | Back alignment and structure |
|
| >pdb|3EK1|A Chain A, Crystal Structure Of Aldehyde Dehydrogenase From Brucella Melitensis Biovar Abortus 2308 Length = 504 | Back alignment and structure |
|
| >pdb|3R31|A Chain A, Crystal Structure Of Betaine Aldehyde Dehydrogenase From Agrobacterium Tumefaciens Length = 517 | Back alignment and structure |
|
| >pdb|3IWK|A Chain A, Crystal Structure Of Aminoaldehyde Dehydrogenase 1 From Pisum Sativum (Psamadh1) Length = 503 | Back alignment and structure |
|
| >pdb|2D4E|A Chain A, Crystal Structure Of The Hpcc From Thermus Thermophilus Hb8 Length = 515 | Back alignment and structure |
|
| >pdb|3B4W|A Chain A, Crystal Structure Of Mycobacterium Tuberculosis Aldehyde Dehydrogenase Complexed With Nad+ Length = 495 | Back alignment and structure |
|
| >pdb|4I9B|A Chain A, Structure Of Aminoaldehyde Dehydrogenase 1 From Solanum Lycopersium (slamadh1) With A Thiohemiacetal Intermediate Length = 517 | Back alignment and structure |
|
| >pdb|4I8Q|A Chain A, Structure Of The Aminoaldehyde Dehydrogenase 1 E260a Mutant From Solanum Lycopersicum (slamadh1-e260a) Length = 514 | Back alignment and structure |
|
| >pdb|3JZ4|C Chain C, Crystal Structure Of E. Coli Nadp Dependent Enzyme Length = 481 | Back alignment and structure |
|
| >pdb|3JZ4|A Chain A, Crystal Structure Of E. Coli Nadp Dependent Enzyme Length = 481 | Back alignment and structure |
|
| >pdb|1WNB|A Chain A, Escherichia Coli Ydcw Gene Product Is A Medium-Chain Aldehyde Dehydrogenase (Complexed With Nadh And Betaine Aldehyde) Length = 495 | Back alignment and structure |
|
| >pdb|3TY7|A Chain A, Crystal Structure Of Aldehyde Dehydrogenase Family Protein From Staphylococcus Aureus Length = 478 | Back alignment and structure |
|
| >pdb|3IFG|A Chain A, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase From Burkholderia Pseudomallei, Part 1 Of 2 Length = 484 | Back alignment and structure |
|
| >pdb|4DAL|A Chain A, Crystal Structure Of Putative Aldehyde Dehydrogenase From Sinorhizobium Meliloti 1021 Length = 498 | Back alignment and structure |
|
| >pdb|2W8N|A Chain A, The Crytal Structure Of The Oxidized Form Of Human Ssadh Length = 487 | Back alignment and structure |
|
| >pdb|2W8P|A Chain A, The Crystal Structure Of Human C340a Ssadh Length = 487 | Back alignment and structure |
|
| >pdb|3I44|A Chain A, Crystal Structure Of Aldehyde Dehydrogenase From Bartonella Henselae At 2.0a Resolution Length = 497 | Back alignment and structure |
|
| >pdb|2OPX|A Chain A, Crystal Structure Of Lactaldehyde Dehydrogenase From Escherichia Coli Length = 479 | Back alignment and structure |
|
| >pdb|2IMP|A Chain A, Crystal Structure Of Lactaldehyde Dehydrogenase From E. Coli: The Ternary Complex With Product Bound (L)-Lactate And Nadh. Length = 479 | Back alignment and structure |
|
| >pdb|2HG2|A Chain A, Structure Of Lactaldehyde Dehydrogenase Length = 479 | Back alignment and structure |
|
| >pdb|3K2W|A Chain A, Crystal Structure Of Betaine-Aldehyde Dehydrogenase From Pseudoalteromonas Atlantica T6c Length = 497 | Back alignment and structure |
|
| >pdb|3RH9|A Chain A, The Crystal Structure Of Oxidoreductase From Marinobacter Aquaeolei Length = 506 | Back alignment and structure |
|
| >pdb|3QAN|A Chain A, Crystal Structure Of 1-Pyrroline-5-Carboxylate Dehydrogenase From Bacillus Halodurans Length = 538 | Back alignment and structure |
|
| >pdb|1T90|A Chain A, Crystal Structure Of Methylmalonate Semialdehyde Dehydrogenase From Bacillus Subtilis Length = 486 | Back alignment and structure |
|
| >pdb|3RJL|A Chain A, Crystal Structure Of 1-Pyrroline-5-Carboxylate Dehydrogenase From Bacillus Licheniformis (Target Nysgrc-000337) Length = 538 | Back alignment and structure |
|
| >pdb|3R64|A Chain A, Crystal Structure Of A Nad-Dependent Benzaldehyde Dehydrogenase From Corynebacterium Glutamicum Length = 508 | Back alignment and structure |
|
| >pdb|3PQA|A Chain A, Crystal Structure Of Glyceraldehyde-3-Phosphate Dehydrogenase Gapn From Methanocaldococcus Jannaschii Dsm 2661 Length = 486 | Back alignment and structure |
|
| >pdb|4F9I|A Chain A, Crystal Structure Of Proline Utilization A (Puta) From Geobacter Sulfurreducens Pca Length = 1026 | Back alignment and structure |
|
| >pdb|1UZB|A Chain A, 1-pyrroline-5-carboxylate Dehydrogenase Length = 516 | Back alignment and structure |
|
| >pdb|2BHP|A Chain A, Crystal Analysis Of 1-Pyrroline-5-Carboxylate Dehydrogenase From Thermus With Bound Nad. Length = 516 | Back alignment and structure |
|
| >pdb|1EUH|A Chain A, Apo Form Of A Nadp Dependent Aldehyde Dehydrogenase From Streptococcus Mutans Length = 475 | Back alignment and structure |
|
| >pdb|3PRL|A Chain A, Crystal Structure Of Nadp-Dependent Glyceraldehyde-3-Phosphate Dehydrogenase From Bacillus Halodurans C-125 Length = 505 | Back alignment and structure |
|
| >pdb|2BJA|A Chain A, Crystal Analysis Of 1-Pyrroline-5-Carboxylate Dehydrogenase From Thermus With Bound Nadh Length = 516 | Back alignment and structure |
|
| >pdb|2ID2|A Chain A, Gapn T244s Mutant X-Ray Structure At 2.5 A Length = 475 | Back alignment and structure |
|
| >pdb|2ESD|A Chain A, Crystal Structure Of Thioacylenzyme Intermediate Of An Nadp Dependent Aldehyde Dehydrogenase Length = 475 | Back alignment and structure |
|
| >pdb|4DNG|A Chain A, Crystal Structure Of Putative Aldehyde Dehydrogenase From Bacillus Subtilis Subsp. Subtilis Str. 168 Length = 485 | Back alignment and structure |
|
| >pdb|1QI1|A Chain A, Ternary Complex Of An Nadp Dependent Aldehyde Dehydrogenase Length = 475 | Back alignment and structure |
|
| >pdb|2JG7|A Chain A, Crystal Structure Of Seabream Antiquitin And Elucidation Of Its Substrate Specificity Length = 510 | Back alignment and structure |
|
| >pdb|3ROS|A Chain A, Crystal Structure Of Nad-Dependent Aldehyde Dehydrogenase From Lactobacillus Acidophilus Length = 484 | Back alignment and structure |
|
| >pdb|1KY8|A Chain A, Crystal Structure Of The Non-Phosphorylating Glyceraldehyde-3- Phosphate Dehydrogenase Length = 501 | Back alignment and structure |
|
| >pdb|1UXV|A Chain A, Structural Basis For Allosteric Regulation And Substrate Specificity Of The Non-Phosphorylating Glyceraldehyde-3-Phosphate Dehydrogenase (Gapn) From Thermoproteus Tenax Length = 501 | Back alignment and structure |
|
| >pdb|1UXN|A Chain A, Structural Basis For Allosteric Regulation And Substrate Specificity Of The Non-Phosphorylating Glyceraldehyde-3-Phosphate Dehydrogenase (Gapn) From Thermoproteus Tenax Length = 501 | Back alignment and structure |
|
| >pdb|3HAZ|A Chain A, Crystal Structure Of Bifunctional Proline Utilization A (Puta) Protein Length = 1001 | Back alignment and structure |
|
| >pdb|4H7N|A Chain A, The Structure Of Putative Aldehyde Dehydrogenase Puta From Anabaena Variabilis. Length = 474 | Back alignment and structure |
|
| >pdb|3EFV|A Chain A, Crystal Structure Of A Putative Succinate-Semialdehyde Dehydrogenase From Salmonella Typhimurium Lt2 With Bound Nad Length = 462 | Back alignment and structure |
|
| >pdb|4E4G|A Chain A, Crystal Structure Of Putative Methylmalonate-Semialdehyde Dehydrogenase From Sinorhizobium Meliloti 1021 Length = 521 | Back alignment and structure |
|
| >pdb|2J6L|A Chain A, Structure Of Aminoadipate-Semialdehyde Dehydrogenase Length = 500 | Back alignment and structure |
|
| >pdb|3LV1|A Chain A, Benzaldehyde Dehydrogenase, A Class 3 Aldehyde Dehydrogenase, With Bound Nadp+ Length = 457 | Back alignment and structure |
|
| >pdb|3JU8|A Chain A, Crystal Structure Of Succinylglutamic Semialdehyde Dehydrogenase From Pseudomonas Aeruginosa. Length = 490 | Back alignment and structure |
|
| >pdb|3SZA|A Chain A, Crystal Structure Of Human Aldh3a1 - Apo Form Length = 469 | Back alignment and structure |
|
| >pdb|3LNS|A Chain A, Benzaldehyde Dehydrogenase, A Class 3 Aldehyde Dehydrogenase, With Bound Nadp+ And Benzoate Adduct Length = 457 | Back alignment and structure |
|
| >pdb|1AD3|A Chain A, Class 3 Aldehyde Dehydrogenase Complex With Nicotinamide- Adenine-Dinucleotide Length = 452 | Back alignment and structure |
|
| >pdb|3V9G|A Chain A, Crystal Structure Of Human 1-Pyrroline-5-Carboxylate Dehydrogenase Length = 566 | Back alignment and structure |
|
| >pdb|3V9H|A Chain A, Crystal Structure Of Human 1-Pyrroline-5-Carboxylate Dehydrogenase Mutant S352a Length = 566 | Back alignment and structure |
|
| >pdb|3V9J|A Chain A, Crystal Structure Of Mouse 1-Pyrroline-5-Carboxylate Dehydrogenase Complexed With Sulfate Ion Length = 563 | Back alignment and structure |
|
| >pdb|3V9I|A Chain A, Crystal Structure Of Human 1-Pyrroline-5-Carboxylate Dehydrogenase Mutant S352l Length = 566 | Back alignment and structure |
|
| >pdb|2Y51|A Chain A, Crystal Structure Of E167a Mutant Of The Box Pathway Encoded Aldh From Burkholderia Xenovorans Lb400 Length = 534 | Back alignment and structure |
|
| >pdb|2Y53|A Chain A, Crystal Structure Of E257q Mutant Of The Box Pathway Encoded Aldh From Burkholderia Xenovorans Lb400 Length = 534 | Back alignment and structure |
|
| >pdb|2VRO|A Chain A, Crystal Structure Of Aldehyde Dehydrogenase From Burkholderia Xenovorans Lb400 Length = 532 | Back alignment and structure |
|
| >pdb|2Y52|A Chain A, Crystal Structure Of E496a Mutant Of The Box Pathway Encoded Aldh From Burkholderia Xenovorans Lb400 Length = 534 | Back alignment and structure |
|
| >pdb|2Y5D|A Chain A, Crystal Structure Of C296a Mutant Of The Box Pathway Encoded Aldh From Burkholderia Xenovorans Lb400 Length = 534 | Back alignment and structure |
|
| >pdb|3V4C|A Chain A, Crystal Structure Of A Semialdehyde Dehydrogenase From Sinorhizobium Meliloti 1021 Length = 528 | Back alignment and structure |
|
Structure Templates Detected by RPS-BLAST
Original result of RPS-BLAST against PDB70 database
| >1bxs_A Aldehyde dehydrogenase; retinal, class 1, tetramer, NAD, cytosolic, oxidoreductase; HET: NAD; 2.35A {Ovis aries} SCOP: c.82.1.1 PDB: 1o9j_A* 1bi9_A* Length = 501 | Back alignment and structure |
|---|
Score = 730 bits (1886), Expect = 0.0
Identities = 219/408 (53%), Positives = 297/408 (72%)
Query: 1 MWKFADLIEEHVEELAALDALDAGKVYLRAKTAEIPGAAEFLRFFAGAADKIHGEVLKMS 60
+ K ADLIE LA ++A++ GK++ A ++ G + LR+ AG ADKI G + M
Sbjct: 89 LNKLADLIERDRLLLATMEAMNGGKLFSNAYLMDLGGCIKTLRYCAGWADKIQGRTIPMD 148
Query: 61 SELQGYTLREPVGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLTALYYAHL 120
YT EPVGV G IIPWNFP MF K+ PAL+ G T++VKPAEQTPLTAL+ L
Sbjct: 149 GNFFTYTRSEPVGVCGQIIPWNFPLLMFLWKIGPALSCGNTVVVKPAEQTPLTALHMGSL 208
Query: 121 AKLAGIPDGVLNVVPGFGPTAGAAICSHMDIDYVCFTGSTDVGRLVMQAAAASNLKQVSL 180
K AG P GV+N+VPG+GPTAGAAI SHMD+D V FTGST+VG+L+ +AA SNLK+VSL
Sbjct: 209 IKEAGFPPGVVNIVPGYGPTAGAAISSHMDVDKVAFTGSTEVGKLIKEAAGKSNLKRVSL 268
Query: 181 ELGGKSPLLIFDDADLDTAADVALLGNLYNKGEICVASSRVFVQEGIYDKFEKKLLEKAK 240
ELGGKSP ++F DADLD A + A G Y++G+ C+A+SR+FV+E IYD+F ++ +E+AK
Sbjct: 269 ELGGKSPCIVFADADLDNAVEFAHQGVFYHQGQCCIAASRLFVEESIYDEFVRRSVERAK 328
Query: 241 AWLVGDPFDPTVRQGPQISERHFDRILSYIEHGKREGATLLTGGKPIGDKGYYIEPTIFT 300
+++G+P P V QGPQI + +++IL IE GK+EGA L GG P G+KGY+I+PT+F+
Sbjct: 329 KYVLGNPLTPGVSQGPQIDKEQYEKILDLIESGKKEGAKLECGGGPWGNKGYFIQPTVFS 388
Query: 301 NVKEDMIIAKEEIFGPVMALMKFKTVEEAIKSANNTQYGLAAGIVTKDLNVANTVSRSIR 360
+V +DM IAKEEIFGPV +MKFK++++ IK ANNT YGL+AGI T D++ A TVS +++
Sbjct: 389 DVTDDMRIAKEEIFGPVQQIMKFKSLDDVIKRANNTFYGLSAGIFTNDIDKAITVSSALQ 448
Query: 361 AGIIWINCYFGFSMDCPYGGYKMSGFGREYGLESLYKYLQIKSVVTPI 408
+G +W+NCY S CP+GG+KMSG GRE G ++Y ++K+V I
Sbjct: 449 SGTVWVNCYSVVSAQCPFGGFKMSGNGRELGEYGFHEYTEVKTVTIKI 496
|
| >1o04_A Aldehyde dehydrogenase, mitochondrial precursor; ALDH, NAD, NADH, isomerization, oxidoreductase; HET: NAD; 1.42A {Homo sapiens} SCOP: c.82.1.1 PDB: 1nzw_A* 3inl_A* 3n80_A* 1nzz_A* 1o00_A* 1nzx_A* 1o01_A* 1o05_A 1of7_A* 1o02_A* 3inj_A* 3sz9_A* 1zum_A 2onm_A* 2onp_A* 2onn_A 2ono_A* 3n81_A 3n82_A* 3n83_A* ... Length = 500 | Back alignment and structure |
|---|
Score = 729 bits (1885), Expect = 0.0
Identities = 214/408 (52%), Positives = 286/408 (70%)
Query: 1 MWKFADLIEEHVEELAALDALDAGKVYLRAKTAEIPGAAEFLRFFAGAADKIHGEVLKMS 60
+ + ADLIE LAAL+ LD GK Y+ + ++ + LR++AG ADK HG+ + +
Sbjct: 88 LNRLADLIERDRTYLAALETLDNGKPYVISYLVDLDMVLKCLRYYAGWADKYHGKTIPID 147
Query: 61 SELQGYTLREPVGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLTALYYAHL 120
+ YT EPVGV G IIPWNFP M K+ PALA G +++K AEQTPLTALY A+L
Sbjct: 148 GDFFSYTRHEPVGVCGQIIPWNFPLLMQAWKLGPALATGNVVVMKVAEQTPLTALYVANL 207
Query: 121 AKLAGIPDGVLNVVPGFGPTAGAAICSHMDIDYVCFTGSTDVGRLVMQAAAASNLKQVSL 180
K AG P GV+N+VPGFGPTAGAAI SH D+D V FTGST++GR++ AA +SNLK+V+L
Sbjct: 208 IKEAGFPPGVVNIVPGFGPTAGAAIASHEDVDKVAFTGSTEIGRVIQVAAGSSNLKRVTL 267
Query: 181 ELGGKSPLLIFDDADLDTAADVALLGNLYNKGEICVASSRVFVQEGIYDKFEKKLLEKAK 240
ELGGKSP +I DAD+D A + A +N+G+ A SR FVQE IYD+F ++ + +AK
Sbjct: 268 ELGGKSPNIIMSDADMDWAVEQAHFALFFNQGQCSCAGSRTFVQEDIYDEFVERSVARAK 327
Query: 241 AWLVGDPFDPTVRQGPQISERHFDRILSYIEHGKREGATLLTGGKPIGDKGYYIEPTIFT 300
+ +VG+PFD QGPQ+ E F +IL YI GK+EGA LL GG D+GY+I+PT+F
Sbjct: 328 SRVVGNPFDSKTEQGPQVDETQFKKILGYINTGKQEGAKLLCGGGIAADRGYFIQPTVFG 387
Query: 301 NVKEDMIIAKEEIFGPVMALMKFKTVEEAIKSANNTQYGLAAGIVTKDLNVANTVSRSIR 360
+V++ M IAKEEIFGPVM ++KFKT+EE + ANN+ YGLAA + TKDL+ AN +S++++
Sbjct: 388 DVQDGMTIAKEEIFGPVMQILKFKTIEEVVGRANNSTYGLAAAVFTKDLDKANYLSQALQ 447
Query: 361 AGIIWINCYFGFSMDCPYGGYKMSGFGREYGLESLYKYLQIKSVVTPI 408
AG +W+NCY F P+GGYKMSG GRE G L Y ++K+V +
Sbjct: 448 AGTVWVNCYDVFGAQSPFGGYKMSGSGRELGEYGLQAYTEVKTVTVKV 495
|
| >2o2p_A Formyltetrahydrofolate dehydrogenase; aldehyde dehydrogenase, FDH, oxidoreductase; 1.70A {Rattus norvegicus} PDB: 2o2q_A* 2o2r_A* 3rho_A* 3rhm_A* 3rhj_A* 3rhq_A* 3rhp_A* 3rhr_A* 3rhl_A* Length = 517 | Back alignment and structure |
|---|
Score = 722 bits (1865), Expect = 0.0
Identities = 177/410 (43%), Positives = 272/410 (66%), Gaps = 6/410 (1%)
Query: 1 MWKFADLIEEHVEELAALDALDAGKVYLRAKTAEIPGAAEFLRFFAGAADKIHGEVLKMS 60
+++ AD++E+H EELA ++ALDAG VY A + + + R+FAG DKI G + ++
Sbjct: 104 LYRLADVMEQHQEELATIEALDAGAVYTLALKTHVGMSIQTFRYFAGWCDKIQGATIPIN 163
Query: 61 SELQG----YTLREPVGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLTALY 116
T +EPVGV G +IPWN+P M K + LAAG T+++KPA+ TPLTAL
Sbjct: 164 QARPNRNLTLTKKEPVGVCGIVIPWNYPLMMLSWKTAACLAAGNTVVIKPAQVTPLTALK 223
Query: 117 YAHLAKLAGIPDGVLNVVPGFGPTAGAAICSHMDIDYVCFTGSTDVGRLVMQAAAASNLK 176
+A L AGIP GV+N++PG G G + H D+ + FTGST+VG+ +M++ A SN+K
Sbjct: 224 FAELTLKAGIPKGVVNILPGSGSLVGQRLSDHPDVRKIGFTGSTEVGKHIMKSCALSNVK 283
Query: 177 QVSLELGGKSPLLIFDDADLDTAADVALLGNLYNKGEICVASSRVFVQEGIYDKFEKKLL 236
+VSLELGGKSPL+IF D DL+ A + + +NKGE C+A+ R+FV+E I+++F +K++
Sbjct: 284 KVSLELGGKSPLIIFADCDLNKAVQMGMSSVFFNKGENCIAAGRLFVEESIHNQFVQKVV 343
Query: 237 EKAKAWLVGDPFDPTVRQGPQISERHFDRILSYIEHGKREGATLLTGGKPIGDKGYYIEP 296
E+ + +G+P + GPQ E H +++ Y + G +EGATL+ GG + G++ +P
Sbjct: 344 EEVEKMKIGNPLERDTNHGPQNHEAHLRKLVEYCQRGVKEGATLVCGGNQVPRPGFFFQP 403
Query: 297 TIFTNVKEDMIIAKEEIFGPVMALMKFK--TVEEAIKSANNTQYGLAAGIVTKDLNVANT 354
T+FT+V++ M IAKEE FGP+M + +F V+ + AN T++GLA+G+ T+D+N A
Sbjct: 404 TVFTDVEDHMYIAKEESFGPIMIISRFADGDVDAVLSRANATEFGLASGVFTRDINKALY 463
Query: 355 VSRSIRAGIIWINCYFGFSMDCPYGGYKMSGFGREYGLESLYKYLQIKSV 404
VS ++AG ++IN Y + P+GG+K SGFG++ G +L +YL+IK+V
Sbjct: 464 VSDKLQAGTVFINTYNKTDVAAPFGGFKQSGFGKDLGEAALNEYLRIKTV 513
|
| >3u4j_A NAD-dependent aldehyde dehydrogenase; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, tetramer; 2.00A {Sinorhizobium meliloti} Length = 528 | Back alignment and structure |
|---|
Score = 711 bits (1838), Expect = 0.0
Identities = 180/417 (43%), Positives = 249/417 (59%), Gaps = 5/417 (1%)
Query: 1 MWKFADLIEEHVEELAALDALDAGKVYLRAKTAEIPGAAEFLRFFAGAADKIHGEVLKMS 60
M+K ADLI EELA +++L+ GK +A+ EI A+ + AG A + G+
Sbjct: 91 MFKVADLILARQEELALIESLEVGKPIAQAR-GEIGFCADLWSYAAGQARALEGQTHNNI 149
Query: 61 S-ELQGYTLREPVGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLTALYYAH 119
+ G LREPVGVVG I PWNFP + +V A+ +GCT+++KP+E T T++ A
Sbjct: 150 GDDRLGLVLREPVGVVGIITPWNFPFIIASERVPWAIGSGCTVVLKPSEFTSGTSIRLAE 209
Query: 120 LAKLAGIPDGVLNVVPGFGPTAGAAICSHMDIDYVCFTGSTDVGRLVMQAAAASNLKQVS 179
LA+ AGIPDGV NVV G+G AG + ++D V FTGS VG + + AA +K+V
Sbjct: 210 LAREAGIPDGVFNVVTGYGDPAGQVLAEDPNVDMVAFTGSVRVGTKLGEIAA-RTVKRVG 268
Query: 180 LELGGKSPLLIFDDADLDTAADVALLGNLYNKGEICVASSRVFVQEGIYDKFEKKLLEKA 239
LELGGK P ++F DADLD AAD G +N G+ C++ SR+ VQEGI D ++LL+ +
Sbjct: 269 LELGGKGPQIVFADADLDAAADGIAYGVYHNAGQCCISGSRLLVQEGIRDALMERLLDIS 328
Query: 240 KAWLVGDPFDPTVRQGPQISERHFDRILSYIEHGKREGATLLTGGKPIG-DKGYYIEPTI 298
+ GDP + + G ISE H +++ SY+ G GA LL GG+ IG + G Y PT+
Sbjct: 329 RKVAFGDPLNERTKIGAMISEAHAEKVHSYVTAGITSGAELLLGGERIGREAGLYYAPTV 388
Query: 299 FTNVKEDMIIAKEEIFGPVMALMKFKTVEEAIKSANNTQYGLAAGIVTKDLNVANTVSRS 358
F V DM IA+EEIFGPV++ + FKT +EA+ AN T++GL+A + + +L A R
Sbjct: 389 FAGVTPDMSIAREEIFGPVLSTLTFKTADEAVALANATEFGLSASVWSTNLETALQTIRR 448
Query: 359 IRAGIIWINCYFGFSMDCPYGGYKMSGFGREYGLESLYKYLQIKSVVTPI-YNSPWL 414
IRAG WIN + + P GGYK SG GRE G +Y Q K V + +PW
Sbjct: 449 IRAGRCWINSVIDGTPELPIGGYKKSGLGRELGRYGFDEYSQFKGVHVTLGRPAPWF 505
|
| >3r31_A BADH, betaine aldehyde dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.15A {Agrobacterium tumefaciens} Length = 517 | Back alignment and structure |
|---|
Score = 703 bits (1818), Expect = 0.0
Identities = 170/419 (40%), Positives = 253/419 (60%), Gaps = 9/419 (2%)
Query: 1 MWKFADLIEEHVEELAALDALDAGKVYLRAKTAEIPGAAEFLRFFAG-AADKIHGEVLKM 59
+ + AD++ E + L+ L+ LD GK A+ A+ FF G A ++G+ + +
Sbjct: 80 LKRAADIMRERNDALSTLETLDTGKPIQETIVADPTSGADAFEFFGGIAPSALNGDYIPL 139
Query: 60 SSELQGYTLREPVGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLTALYYAH 119
+ YT R P+GV I WN+P + K +PAL AG M+ KP+E TPL AL A
Sbjct: 140 GGDF-AYTKRVPLGVCVGIGAWNYPQQIACWKAAPALVAGNAMVFKPSENTPLGALKIAE 198
Query: 120 LAKLAGIPDGVLNVVPGFGPTAGAAICSHMDIDYVCFTGSTDVGRLVMQAAAASNLKQVS 179
+ AG+P G+ NV+ G T G + +H D+ V TGS GR V AAA +LK V+
Sbjct: 199 ILIEAGLPKGLFNVIQGDRDT-GPLLVNHPDVAKVSLTGSVPTGRKVAAAAA-GHLKHVT 256
Query: 180 LELGGKSPLLIFDDADLDTAADVALLGNLYNKGEICVASSRVFVQEGIYDKFEKKLLEKA 239
+ELGGKSP+++FDDAD+++A A+LGN Y+ G++C +RVFVQ+ +F + L +
Sbjct: 257 MELGGKSPMIVFDDADIESAVGGAMLGNFYSSGQVCSNGTRVFVQKKAKARFLENLKRRT 316
Query: 240 KAWLVGDPFDPTVRQGPQISERHFDRILSYIEHGKREGATLLTGGK---PIGDKGYYIEP 296
+A ++GDP D GP +S+ +++LSYIE GK EGATL+TGG + +G Y++P
Sbjct: 317 EAMILGDPLDYATHLGPLVSKAQQEKVLSYIEKGKAEGATLITGGGIPNNVAGEGAYVQP 376
Query: 297 TIFTNVKEDMIIAKEEIFGPVMALMKFKTVEEAIKSANNTQYGLAAGIVTKDLNVANTVS 356
T+F +V +DM IA+EEIFGPVM ++ F +E + AN T++GLA G+ T DL A+ V
Sbjct: 377 TVFADVTDDMTIAREEIFGPVMCVLDFDDEDEVLARANATEFGLAGGVFTADLARAHRVV 436
Query: 357 RSIRAGIIWINCYFGFSMDCPYGGYKMSGFGREYGLESLYKYLQIKSVV--TPIYNSPW 413
+ AG +WIN Y ++ P+GG K SGFGRE +L Y ++K+V T ++P+
Sbjct: 437 DGLEAGTLWINTYNLCPVEIPFGGSKQSGFGRENSAAALEHYSELKTVYVSTGKVDAPY 495
|
| >3iwj_A Putative aminoaldehyde dehydrogenase; rossmann fold, dimer, betaine aldehyde dehydrogenase, NAD, oxidoreductase; HET: NAD; 2.15A {Pisum sativum} PDB: 3iwk_A* 4a0m_A* Length = 503 | Back alignment and structure |
|---|
Score = 703 bits (1816), Expect = 0.0
Identities = 179/419 (42%), Positives = 251/419 (59%), Gaps = 8/419 (1%)
Query: 1 MWKFADLIEEHVEELAALDALDAGKVYLRAKTAEIPGAAEFLRFFAGAADKIHGEVLKMS 60
+ A + E ELA L+++D GK A +I A ++A A+K+
Sbjct: 78 LRAIAAKVTEKKPELAKLESIDCGKPLDEAA-WDIDDVAGCFEYYADLAEKLDARQKAPV 136
Query: 61 S----ELQGYTLREPVGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLTALY 116
S + + LREP+GVVG I PWN+P M KV+PALAAGC I+KP+E LT L
Sbjct: 137 SLPMDTFKSHVLREPIGVVGLITPWNYPMLMATWKVAPALAAGCAAILKPSELASLTCLE 196
Query: 117 YAHLAKLAGIPDGVLNVVPGFGPTAGAAICSHMDIDYVCFTGSTDVGRLVMQAAAASNLK 176
+ K G+P GVLN++ G GP AGA + +H D+D V FTGS+ G +M AAA +K
Sbjct: 197 LGEICKEVGLPPGVLNILTGLGPEAGAPLATHPDVDKVAFTGSSATGSKIMTAAA-QLVK 255
Query: 177 QVSLELGGKSPLLIFDDADLDTAADVALLGNLYNKGEICVASSRVFVQEGIYDKFEKKLL 236
VSLELGGKSPL++F+D DLD AA+ A+ G + G+IC A+SR+ + E I +F +++
Sbjct: 256 PVSLELGGKSPLVVFEDVDLDKAAEWAIFGCFWTNGQICSATSRLILHESIATEFLNRIV 315
Query: 237 EKAKAWLVGDPFDPTVRQGPQISERHFDRILSYIEHGKREGATLLTGGKPIG--DKGYYI 294
+ K + DP + R GP +SE +++IL ++ + K EGAT+LTGG KG++I
Sbjct: 316 KWIKNIKISDPLEEGCRLGPVVSEGQYEKILKFVSNAKSEGATILTGGSRPEHLKKGFFI 375
Query: 295 EPTIFTNVKEDMIIAKEEIFGPVMALMKFKTVEEAIKSANNTQYGLAAGIVTKDLNVANT 354
EPTI T+V +M I +EE+FGPV+ + F T EEAI AN+T YGL A +++ DL
Sbjct: 376 EPTIITDVTTNMQIWREEVFGPVLCVKTFSTEEEAIDLANDTVYGLGAAVISNDLERCER 435
Query: 355 VSRSIRAGIIWINCYFGFSMDCPYGGYKMSGFGREYGLESLYKYLQIKSVVTPIYNSPW 413
V+++ +AGI+W+NC P+GG K SGFGRE G L YL +K V I PW
Sbjct: 436 VTKAFKAGIVWVNCSQPCFTQAPWGGVKRSGFGRELGEWGLDNYLSVKQVTQYISEEPW 494
|
| >1a4s_A ALDH, betaine aldehyde dehydrogenase; oxidoreductase, aldehyde oxidation; 2.10A {Gadus callarias} SCOP: c.82.1.1 PDB: 1bpw_A* Length = 503 | Back alignment and structure |
|---|
Score = 701 bits (1813), Expect = 0.0
Identities = 162/420 (38%), Positives = 258/420 (61%), Gaps = 11/420 (2%)
Query: 1 MWKFADLIEEHVEELAALDALDAGKVYLRAKTAEIPGAAEFLRFFAGAADKIHGEVLKMS 60
M + A +I E + +A L+ ++ GK A+ +I A + + ++AG A + G+ +++
Sbjct: 86 MLEAARIIRERRDNIAKLEVINNGKTITEAE-YDIDAAWQCIEYYAGLAPTLSGQHIQLP 144
Query: 61 SELQGYTLREPVGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLTALYYAHL 120
YT REP+GV I+ WN+P + K +PALA G ++ KP+ TP+T + A +
Sbjct: 145 GGAFAYTRREPLGVCAGILAWNYPFMIAAWKCAPALACGNAVVFKPSPMTPVTGVILAEI 204
Query: 121 AKLAGIPDGVLNVVPGFGPTAGAAICSHMDIDYVCFTGSTDVGRLVMQAAAASNLKQVSL 180
AG+P G++NVV G G G+ +C H ++ V FTGS G+ VM+ +A +K V+L
Sbjct: 205 FHEAGVPVGLVNVVQG-GAETGSLLCHHPNVAKVSFTGSVPTGKKVMEMSA-KTVKHVTL 262
Query: 181 ELGGKSPLLIFDDADLDTAADVALLGNLYNKGEICVASSRVFVQEGIYDKFEKKLLEKAK 240
ELGGKSPLLIF D +L+ A AL+ N +G++C +RVFVQ I +F ++++++ K
Sbjct: 263 ELGGKSPLLIFKDCELENAVRGALMANFLTQGQVCTNGTRVFVQREIMPQFLEEVVKRTK 322
Query: 241 AWLVGDPFDPTVRQGPQISERHFDRILSYIEHGKREGATLLTGGKPIG------DKGYYI 294
A +VGDP R G IS+ D++L ++ K+EGA +L GG+P+ GY++
Sbjct: 323 AIVVGDPLLTETRMGGLISKPQLDKVLGFVAQAKKEGARVLCGGEPLTPSDPKLKNGYFM 382
Query: 295 EPTIFTNVKEDMIIAKEEIFGPVMALMKFKTVEEAIKSANNTQYGLAAGIVTKDLNVANT 354
P + N ++DM KEEIFGPVM+++ F T EE ++ ANNT +GLA+G+ T+D++ A+
Sbjct: 383 SPCVLDNCRDDMTCVKEEIFGPVMSVLPFDTEEEVLQRANNTTFGLASGVFTRDISRAHR 442
Query: 355 VSRSIRAGIIWINCYFGFSMDCPYGGYKMSGFGREYGLESLYKYLQIKSVVTPI--YNSP 412
V+ ++ AG +IN Y ++ P+GGYKMSGFGRE G ++ Y Q+K+V+ + +S
Sbjct: 443 VAANLEAGTCYINTYSISPVEVPFGGYKMSGFGRENGQATVDYYSQLKTVIVEMGDVDSL 502
|
| >3ed6_A Betaine aldehyde dehydrogenase; structural genomics, infecti deseases, NAD, oxidoreductase, PSI; 1.70A {Staphylococcus aureus} PDB: 3fg0_A* Length = 520 | Back alignment and structure |
|---|
Score = 701 bits (1811), Expect = 0.0
Identities = 167/418 (39%), Positives = 247/418 (59%), Gaps = 7/418 (1%)
Query: 1 MWKFADLIEEHVEELAALDALDAGKVYLRAKTAEIPGAAEFLRFFAGAADKIHGEVLKMS 60
+ AD I+EH E LA L+ LD GK + A++ +FAG ADK GE++
Sbjct: 100 VRAIADKIKEHREALARLETLDTGKTLEESY-ADMDDIHNVFMYFAGLADKDGGEMIDSP 158
Query: 61 S-ELQGYTLREPVGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLTALYYAH 119
+ + ++EPVGVV I PWN+P K++PALA GC++++KP+E TPLT +
Sbjct: 159 IPDTESKIVKEPVGVVTQITPWNYPLLQASWKIAPALATGCSLVMKPSEITPLTTIRVFE 218
Query: 120 LAKLAGIPDGVLNVVPGFGPTAGAAICSHMDIDYVCFTGSTDVGRLVMQAAAASNLKQVS 179
L + G P G +N++ G G G + H ++D V FTG + G+ +M+ AA +N+ ++
Sbjct: 219 LMEEVGFPKGTINLILGAGSEVGDVMSGHKEVDLVSFTGGIETGKHIMKNAA-NNVTNIA 277
Query: 180 LELGGKSPLLIFDDADLDTAADVALLGNLYNKGEICVASSRVFVQEGIYDKFEKKLLEKA 239
LELGGK+P +IFDDAD + A D AL G ++ G++C A SR+ VQ I DKFE+ L+++
Sbjct: 278 LELGGKNPNIIFDDADFELAVDQALNGGYFHAGQVCSAGSRILVQNSIKDKFEQALIDRV 337
Query: 240 KAWLVGDPFDPTVRQGPQISERHFDRILSYIEHGKREGATLLTGGKPIG----DKGYYIE 295
K +G+ FD GP IS H ++I SY++ K EGAT+ GGK G + E
Sbjct: 338 KKIKLGNGFDADTEMGPVISTEHRNKIESYMDVAKAEGATIAVGGKRPDRDDLKDGLFFE 397
Query: 296 PTIFTNVKEDMIIAKEEIFGPVMALMKFKTVEEAIKSANNTQYGLAAGIVTKDLNVANTV 355
PT+ TN M I +EE+FGPV+ + F+T +EAI+ AN++ YGLA + +KD+ A V
Sbjct: 398 PTVITNCDTSMRIVQEEVFGPVVTVEGFETEQEAIQLANDSIYGLAGAVFSKDIGKAQRV 457
Query: 356 SRSIRAGIIWINCYFGFSMDCPYGGYKMSGFGREYGLESLYKYLQIKSVVTPIYNSPW 413
+ ++ G +WIN + + P+GGYK SG GRE G E L +YL K ++T
Sbjct: 458 ANKLKLGTVWINDFHPYFAQAPWGGYKQSGIGRELGKEGLEEYLVSKHILTNTNPQLV 515
|
| >2d4e_A 5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase; HPCC; HET: NAD; 2.10A {Thermus thermophilus} Length = 515 | Back alignment and structure |
|---|
Score = 690 bits (1782), Expect = 0.0
Identities = 174/425 (40%), Positives = 257/425 (60%), Gaps = 14/425 (3%)
Query: 1 MWKFADLIEEHVEELAALDALDAGKVYLRAKTAEIPGAAEFLRFFAGAADK-IHGEVLKM 59
+ + A+LIE+H +ELA ++ LDAG+V + A++ AAE F+A A+ + +
Sbjct: 92 LLRIAELIEKHADELAVMECLDAGQVLRIVR-AQVARAAENFAFYAEYAEHAMEDRTFPV 150
Query: 60 SSELQGYTLREPVGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLTALYYAH 119
+ YT+R P G VG I PWN P + +++PALA G T+++KPAE +P TA A
Sbjct: 151 DRDWLYYTVRVPAGPVGIITPWNAPLMLSTWRIAPALAFGNTVVLKPAEWSPFTATKLAE 210
Query: 120 LAKLAGIPDGVLNVVPGFGPTAGAAICSHMDIDYVCFTGSTDVGRLVMQAAAASNLKQVS 179
+ K A +P GV N+V GFG AGAA+ +H + + TG T+ G++VM+ AA +LK++S
Sbjct: 211 ILKEADLPPGVFNLVQGFGEEAGAALVAHPLVPLLTLTGETETGKIVMR-NAADHLKRLS 269
Query: 180 LELGGKSPLLIFDDADLDTAADVALLGNLYNKGEICVASSRVFVQEGIYDKFEKKLLEKA 239
ELGGKSP L+F DADL+ A D + GE C ASSR+ V+E I++ F K++E+A
Sbjct: 270 PELGGKSPALVFADADLERALDAVVFQIFSFNGERCTASSRLLVEEKIFEDFVGKVVERA 329
Query: 240 KAWLVGDPFDPTVRQGPQISERHFDRILSYIEHGKREGATLLTGGKPIG--------DKG 291
+A VG P DP GP I H R+L Y+E GKREGA LL GG+ +G
Sbjct: 330 RAIRVGHPLDPETEVGPLIHPEHLQRVLGYVEAGKREGARLLVGGERAKTSFRGEDLSRG 389
Query: 292 YYIEPTIFTNVKEDMIIAKEEIFGPVMALMKFKTVEEAIKSANNTQYGLAAGIVTKDLNV 351
Y+ PT+F + M IA+EEIFGPV+ + FK EEA++ AN+T+YGLAA + T+DL
Sbjct: 390 NYLLPTVFVG-ENHMKIAQEEIFGPVLVAIPFKDEEEALRKANDTKYGLAAYVFTRDLER 448
Query: 352 ANTVSRSIRAGIIWINCYFGFSMDCPYGGYKMSGFGREYGLESLYKYLQIKSVVTPI--Y 409
A+ ++ + AG++++N + + P+GG K SG RE G +L Y +K++ P+
Sbjct: 449 AHRLALELEAGMVYLNSHNVRHLPTPFGGVKGSGDRREGGTYALDFYTDLKTIALPLRPP 508
Query: 410 NSPWL 414
+ P
Sbjct: 509 HVPKF 513
|
| >1wnd_A Putative betaine aldehyde dehydrogenase; NADH, fluorescence, kinetics, oxidor; 2.10A {Escherichia coli} SCOP: c.82.1.1 PDB: 1wnb_A Length = 495 | Back alignment and structure |
|---|
Score = 676 bits (1746), Expect = 0.0
Identities = 151/406 (37%), Positives = 229/406 (56%), Gaps = 4/406 (0%)
Query: 1 MWKFADLIEEHVEELAALDALDAGKVYLRAKTAEIPGAAEFLRFFAGAADKIHGEVLKMS 60
+ K AD+IEE+ + A L++ + GK A EIP + RFFAGAA ++G
Sbjct: 88 LLKLADVIEENGQVFAELESRNCGKPLHSAFNDEIPAIVDVFRFFAGAARCLNGLAAGEY 147
Query: 61 SE-LQGYTLREPVGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLTALYYAH 119
E R+P+GVV I PWN+P M K++PALAAG +++KP+E TPLTAL A
Sbjct: 148 LEGHTSMIRRDPLGVVASIAPWNYPLMMAAWKLAPALAAGNCVVLKPSEITPLTALKLAE 207
Query: 120 LAKLAGIPDGVLNVVPGFGPTAGAAICSHMDIDYVCFTGSTDVGRLVMQAAAASNLKQVS 179
LAK P GV+N++ G G T G + H + V TGS G ++ A S++K+
Sbjct: 208 LAKDI-FPAGVVNILFGRGKTVGDPLTGHPKVRMVSLTGSIATGEHIISHTA-SSIKRTH 265
Query: 180 LELGGKSPLLIFDDADLDTAADVALLGNLYNKGEICVASSRVFVQEGIYDKFEKKLLEKA 239
+ELGGK+P+++FDDAD++ + YN G+ C A+ R++ Q+GIYD +KL
Sbjct: 266 MELGGKAPVIVFDDADIEAVVEGVRTFGYYNAGQDCTAACRIYAQKGIYDTLVEKLGAAV 325
Query: 240 KAWLVGDPFDPTVRQGPQISERHFDRILSYIEHGKREG-ATLLTGGKPIGDKGYYIEPTI 298
G P D + GP S H +R+ +E K G ++TGG+ GYY PT+
Sbjct: 326 ATLKSGAPDDESTELGPLSSLAHLERVGKAVEEAKATGHIKVITGGEKRKGNGYYYAPTL 385
Query: 299 FTNVKEDMIIAKEEIFGPVMALMKFKTVEEAIKSANNTQYGLAAGIVTKDLNVANTVSRS 358
+D I ++E+FGPV+++ F E+ + AN++QYGLA+ + TKD+ A+ VS
Sbjct: 386 LAGALQDDAIVQKEVFGPVVSVTPFDNEEQVVNWANDSQYGLASSVWTKDVGRAHRVSAR 445
Query: 359 IRAGIIWINCYFGFSMDCPYGGYKMSGFGREYGLESLYKYLQIKSV 404
++ G W+N +F + P+GG K+SG+G++ L L Y ++ V
Sbjct: 446 LQYGCTWVNTHFMLVSEMPHGGQKLSGYGKDMSLYGLEDYTVVRHV 491
|
| >4f3x_A Putative aldehyde dehydrogenase; structural genomics, protein structure initiative, nysgrc, P biology; HET: MSE NAD; 2.01A {Sinorhizobium meliloti} PDB: 4dal_A* Length = 498 | Back alignment and structure |
|---|
Score = 668 bits (1727), Expect = 0.0
Identities = 142/406 (34%), Positives = 227/406 (55%), Gaps = 4/406 (0%)
Query: 1 MWKFADLIEEHVEELAALDALDAGKVYLRAKTAEIPGAAEFLRFFAGAADKIHGEVLKMS 60
+ K AD IE+ +E AAL+AL+ GK K E+P + RFFAGA +H
Sbjct: 90 LLKIADAIEKEADEFAALEALNCGKPINAVKNDELPAIIDCWRFFAGAVRNLHAPAAGEY 149
Query: 61 SE-LQGYTLREPVGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLTALYYAH 119
R+P+G+VG I PWN+P M K++PA+ G T++ KP+EQTPLTAL A
Sbjct: 150 LPGHTSMIRRDPIGIVGSIAPWNYPLMMMAWKLAPAIGGGNTVVFKPSEQTPLTALKLAR 209
Query: 120 LAKLAGIPDGVLNVVPGFGPTAGAAICSHMDIDYVCFTGSTDVGRLVMQAAAASNLKQVS 179
L +P+GV+NV+ G G T G A+ +H + V TG G+ V+ AAA +K+
Sbjct: 210 LIADI-LPEGVVNVITGRGETVGNALINHPKVGMVSITGDIATGKKVLAAAA-KTVKRTH 267
Query: 180 LELGGKSPLLIFDDADLDTAADVALLGNLYNKGEICVASSRVFVQEGIYDKFEKKLLEKA 239
LELGGK+P++++ DADL+ + YN G+ C A+ R++ + GIY+K L
Sbjct: 268 LELGGKAPVIVYGDADLEAVVNGIRTFGYYNAGQDCTAACRIYAEAGIYEKLVADLTSAV 327
Query: 240 KAWLVGDPFDPTVRQGPQISERHFDRILSYIEHGKREG-ATLLTGGKPIGDKGYYIEPTI 298
D GP IS R DR+ S++E + + TGG+ D+G++ +PT+
Sbjct: 328 STIRYNLDDDTENEIGPLISRRQRDRVASFVERAADQKHIEITTGGRTGSDEGFFFQPTV 387
Query: 299 FTNVKEDMIIAKEEIFGPVMALMKFKTVEEAIKSANNTQYGLAAGIVTKDLNVANTVSRS 358
++ I + E+FGPV+++ +F ++A+ AN++ YGLA+ + TKD++ A +
Sbjct: 388 VAGATQEDEIVRREVFGPVVSVTRFTGKDDAVAWANDSDYGLASSVWTKDISKAMRAASR 447
Query: 359 IRAGIIWINCYFGFSMDCPYGGYKMSGFGREYGLESLYKYLQIKSV 404
++ G WIN +F + + P+GG K SG+G++ + +L Y ++ +
Sbjct: 448 LQYGCTWINTHFMLTNEMPHGGIKQSGYGKDMSVYALEDYTAVRHI 493
|
| >3b4w_A Aldehyde dehydrogenase; RV0223C-NAD complex, structural genomics, PSI-2, protein STR initiative; HET: NAD GOL; 1.80A {Mycobacterium tuberculosis} Length = 495 | Back alignment and structure |
|---|
Score = 628 bits (1622), Expect = 0.0
Identities = 167/415 (40%), Positives = 233/415 (56%), Gaps = 5/415 (1%)
Query: 1 MWKFADLIEEHVEELAALDALDAGKVYLRAKTAEIPGAAEFLRFFAGAADKIHGEVLKMS 60
+ ++ E + L A + G+ +T G+ + +FAGAADK+ +
Sbjct: 76 IAAAVKMLAERKDLFTKLLAAETGQPPTIIETMHWMGSMGAMNYFAGAADKVTWTETRTG 135
Query: 61 SELQGYTLREPVGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLTALYYAHL 120
S Q REPVGVVG I+ WN P + K++PAL AGCT+++KPA +TPLTA A +
Sbjct: 136 SYGQSIVSREPVGVVGAIVAWNVPLFLAVNKIAPALLAGCTIVLKPAAETPLTANALAEV 195
Query: 121 AKLAGIPDGVLNVVPGFGPTAGAAICSHMDIDYVCFTGSTDVGRLVMQAAAASNLKQVSL 180
G+P+GVL+VVPG G G A+ S+ DID FTGS+ VGR V + AA LK +L
Sbjct: 196 FAEVGLPEGVLSVVPG-GIETGQALTSNPDIDMFTFTGSSAVGREVGRRAAE-MLKPCTL 253
Query: 181 ELGGKSPLLIFDDADLDTAADVALLGNLYNKGEICVASSRVFVQEGIYDKFEKKLLEKAK 240
ELGGKS +I +D DL A + + + N G+ CV +R+ YD+ +
Sbjct: 254 ELGGKSAAIILEDVDLAAAIPMMVFSGVMNAGQGCVNQTRILAPRSRYDEIVAAVTNFVT 313
Query: 241 AWLVGDPFDPTVRQGPQISERHFDRILSYIEHGKREGATLLTGGKPIG--DKGYYIEPTI 298
A VG P DP + GP ISE+ R+ YI G EGA L+ GG D G++I+PT+
Sbjct: 314 ALPVGPPSDPAAQIGPLISEKQRTRVEGYIAKGIEEGARLVCGGGRPEGLDNGFFIQPTV 373
Query: 299 FTNVKEDMIIAKEEIFGPVMALMKFKTVEEAIKSANNTQYGLAAGIVTKDLNVANTVSRS 358
F +V M IA+EEIFGPV+A++ + T E+AI AN++ YGLA + T D+ +S+
Sbjct: 374 FADVDNKMTIAQEEIFGPVLAIIPYDTEEDAIAIANDSVYGLAGSVWTTDVPKGIKISQQ 433
Query: 359 IRAGIIWINCYFGFSMDCPYGGYKMSGFGREYGLESLYKYLQIKSVVTPIYNSPW 413
IR G IN Y F P+GGYK SG GRE G E + + Q KSV+ P+ +
Sbjct: 434 IRTGTYGINWY-AFDPGSPFGGYKNSGIGRENGPEGVEHFTQQKSVLLPMGYTVA 487
|
| >3ty7_A Putative aldehyde dehydrogenase SAV2122; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE; 2.40A {Staphylococcus aureus} Length = 478 | Back alignment and structure |
|---|
Score = 609 bits (1573), Expect = 0.0
Identities = 152/408 (37%), Positives = 224/408 (54%), Gaps = 9/408 (2%)
Query: 1 MWKFADLIEEHVEELAALDALDAGKVYLRAKTAEIPGAAEFLRFFAGAADKIHGEVLKMS 60
+ K E +++ + G ++ A D E +
Sbjct: 73 LDKIVKEYENRKDDIVQAITDELGAPLSLSERVHYQMGLNHFVAARDALDNYEFEERRGD 132
Query: 61 SELQGYTLREPVGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLTALYYAHL 120
++E +GV G I PWNFPT +K++ A AAG +++KP+E+TP A+ A +
Sbjct: 133 D----LVVKEAIGVSGLITPWNFPTNQTSLKLAAAFAAGSPVVLKPSEETPFAAVILAEI 188
Query: 121 AKLAGIPDGVLNVVPGFGPTAGAAICSHMDIDYVCFTGSTDVGRLVMQAAAASNLKQVSL 180
G+P GV N+V G G G + H + + FTGS G +M+ AA + K+VSL
Sbjct: 189 FDKVGVPKGVFNLVNGDGAGVGNPLSEHPKVRMMSFTGSGPTGSKIME-KAAKDFKKVSL 247
Query: 181 ELGGKSPLLIFDDADLDTAADVALLGNLYNKGEICVASSRVFVQEGIYDKFEKKLLEKAK 240
ELGGKSP ++ DD D+ AA + N G++C A +RV V I D F +L E+
Sbjct: 248 ELGGKSPYIVLDDVDIKEAAKATTGKVVNNTGQVCTAGTRVLVPNKIKDAFLAELKEQFS 307
Query: 241 AWLVGDPFDPTVRQGPQISERHFDRILSYIEHGKREGATLLTGG--KPIG-DKGYYIEPT 297
VG+P + + GP IS++ FD++ +YI G EGA L GG KP G +KGY+ PT
Sbjct: 308 QVRVGNPREDGTQVGPIISKKQFDQVQNYINKGIEEGAELFYGGPGKPEGLEKGYFARPT 367
Query: 298 IFTNVKEDMIIAKEEIFGPVMALMKFKTVEEAIKSANNTQYGLAAGIVTKDLNVANTVSR 357
IF NV M IA+EEIFGPVM+++ + ++EAI+ AN+T+YGLA ++ KD + V+R
Sbjct: 368 IFINVDNQMTIAQEEIFGPVMSVITYNDLDEAIQIANDTKYGLAGYVIGKDKETLHKVAR 427
Query: 358 SIRAGIIWINCYFGFSMDCPYGGYKMSGFGREYGLESLYKYLQIKSVV 405
SI AG + IN G D P+GGYK SG GRE+G + ++L++KS+
Sbjct: 428 SIEAGTVEINEA-GRKPDLPFGGYKQSGLGREWGDYGIEEFLEVKSIA 474
|
| >3qan_A 1-pyrroline-5-carboxylate dehydrogenase 1; proline oxidation, redox control, apoptosis, NAD binding, oxidoreductase, PSI-biology; 1.95A {Bacillus halodurans} PDB: 3rjl_A Length = 538 | Back alignment and structure |
|---|
Score = 611 bits (1579), Expect = 0.0
Identities = 139/413 (33%), Positives = 219/413 (53%), Gaps = 11/413 (2%)
Query: 1 MWKFADLIEEHVEELAALDALDAGKVYLRAKTAEIPGAAEFLRFFAGAADKIHGE-VLKM 59
+ K A +I E +A +AGK + A A+ A +FL ++A +++ +
Sbjct: 102 LVKAAAIIRRRKHEFSAWLVHEAGKPWKEAD-ADTAEAIDFLEYYARQMIELNRGKEILS 160
Query: 60 SSELQGYTLREPVGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLTALYYAH 119
Q P+GV I PWNF + + G T+++KPA TP+ A +
Sbjct: 161 RPGEQNRYFYTPMGVTVTISPWNFALAIMVGTAVAPIVTGNTVVLKPASTTPVVAAKFVE 220
Query: 120 LAKLAGIPDGVLNVVPGFGPTAGAAICSHMDIDYVCFTGSTDVGRLVMQAAAA-----SN 174
+ + AG+P GV+N VPG G G + H + FTGS DVG + + AA ++
Sbjct: 221 VLEDAGLPKGVINYVPGSGAEVGDYLVDHPKTSLITFTGSKDVGVRLYERAAVVRPGQNH 280
Query: 175 LKQVSLELGGKSPLLIFDDADLDTAADVALLGNLYNKGEICVASSRVFVQEGIYDKFEKK 234
LK+V +E+GGK +++ DADLD AA+ L+ G+ C A SR + + +YD+ +K
Sbjct: 281 LKRVIVEMGGKDTVVVDRDADLDLAAESILVSAFGFSGQKCSAGSRAVIHKDVYDEVLEK 340
Query: 235 LLEKAKAWLVGDPFDPTVRQGPQISERHFDRILSYIEHGKREGATLLTGGKPIGDKGYYI 294
+ AK VGDP + GP I E+ F++I+SYIE GK+EG L+TGG+ G++I
Sbjct: 341 TVALAKNLTVGDPTNRDNYMGPVIDEKAFEKIMSYIEIGKKEG-RLMTGGEGDSSTGFFI 399
Query: 295 EPTIFTNVKEDMIIAKEEIFGPVMALMKFKTVEEAIKSANNTQYGLAAGIVTKDLNVANT 354
+PTI ++ + +I +EEIFGPV+A K + A++ ANNT+YGL ++T++
Sbjct: 400 QPTIIADLDPEAVIMQEEIFGPVVAFSKANDFDHALEIANNTEYGLTGAVITRNRAHIEQ 459
Query: 355 VSRSIRAGIIWIN--CYFGFSMDCPYGGYKMSGFG-REYGLESLYKYLQIKSV 404
R G ++ N C P+GG+KMSG + G + L ++Q K+V
Sbjct: 460 AKREFHVGNLYFNRNCTGAIVGYHPFGGFKMSGTDSKAGGPDYLALHMQAKTV 512
|
| >3i44_A Aldehyde dehydrogenase; oxidoreductase, structural genomics, seattle structural genomics center for infectious disease, ssgcid; 2.00A {Bartonella henselae} Length = 497 | Back alignment and structure |
|---|
Score = 604 bits (1560), Expect = 0.0
Identities = 145/407 (35%), Positives = 232/407 (57%), Gaps = 6/407 (1%)
Query: 1 MWKFADLIEEHVEELAALDALDAGKVYLRAKTAEIPGAAEFLRFFAGAADKIHGEVLKMS 60
+ K ++ E+ ++A +++ G A A+ + +R F A + + +
Sbjct: 91 VEKILEIYEKRSSDMAKTISMEMGAPIDMALNAQTATGSSHIRNFIKAYKEFSFQEALIE 150
Query: 61 SELQGYTLREPVGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLTALYYAHL 120
Q + +GVVG I PWN+P +KV PAL AGCTM++KP+E PL+A+ +A +
Sbjct: 151 GNEQAILHYDAIGVVGLITPWNWPMNQVTLKVIPALLAGCTMVLKPSEIAPLSAMLFAEI 210
Query: 121 AKLAGIPDGVLNVVPGFGPTAGAAICSHMDIDYVCFTGSTDVGRLVMQAAAASNLKQVSL 180
A +P GV N++ G G G+ + +H D++ + FTGST G+ + + A+ LK+V L
Sbjct: 211 LDEAALPSGVFNLINGDGANVGSYLSAHPDLEMISFTGSTRAGKDISKNASN-TLKRVCL 269
Query: 181 ELGGKSPLLIFDDADLDTAADVALLGNLYNKGEICVASSRVFVQEGIYDKFEKKLLEKAK 240
ELGGK +IF DAD+D A + YN G+ C A +R+ V++ IYDK K + A+
Sbjct: 270 ELGGKGANIIFADADID-ALQRGVRHCFYNSGQSCNAPTRMLVEQAIYDKAIKTAKDIAE 328
Query: 241 AWLVGDPFDPTVRQGPQISERHFDRILSYIEHGKREGATLLTGG--KPIG-DKGYYIEPT 297
VG GP +S+ +D+I I+ G EGATL+TGG P+G ++GYY+ PT
Sbjct: 329 KTQVGPGHQTGNHIGPVVSKEQYDKIQDLIQSGIDEGATLVTGGTGLPMGMERGYYVRPT 388
Query: 298 IFTNVKEDMIIAKEEIFGPVMALMKFKTVEEAIKSANNTQYGLAAGIVTKDLNVANTVSR 357
+F +VK M I +EEIFGPV++L+ F T +EA+ AN+T+YGL I ++D + ++
Sbjct: 389 VFADVKPHMRIFREEIFGPVLSLLPFNTEDEAVTLANDTEYGLTNYIQSQDRSKCRRIAA 448
Query: 358 SIRAGIIWINCYFGFSMDCPYGGYKMSGFGREYGLESLYKYLQIKSV 404
+R+G++ +N + +GG K SG RE GL + ++L K++
Sbjct: 449 QVRSGMVEVNGH-ELPGGSYFGGVKFSGRAREGGLWGIKEFLDTKAI 494
|
| >1uzb_A 1-pyrroline-5-carboxylate dehydrogenase; oxidoreductase, riken structural genomics/proteomics initiative, RSGI, structural genomics; 1.4A {Thermus thermophilus} SCOP: c.82.1.1 PDB: 2eiw_A 2bhq_A* 2bhp_A* 2bja_A* 2bjk_A* 2ehq_A* 2ehu_A* 2eii_A* 2eit_A* 2ej6_A 2ejd_A* 2ejl_A 2iy6_A* 2j40_A* 2j5n_A* Length = 516 | Back alignment and structure |
|---|
Score = 568 bits (1467), Expect = 0.0
Identities = 133/414 (32%), Positives = 220/414 (53%), Gaps = 13/414 (3%)
Query: 1 MWKFADLIEEHVEELAALDALDAGKVYLRAKTAEIPGAAEFLRFFAGAADKIHGEVLKMS 60
+ K A L+ EL A + GK ++ A A++ A +F+ ++A AA + +++
Sbjct: 102 LLKAAALMRRRKRELEATLVYEVGKNWVEAS-ADVAEAIDFIEYYARAALRYRYPAVEVV 160
Query: 61 SE--LQGYTLREPVGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLTALYYA 118
+ P+G I PWNFP +F + +A G T+I KPAE +
Sbjct: 161 PYPGEDNESFYVPLGAGVVIAPWNFPVAIFTGMIVGPVAVGNTVIAKPAEDAVVVGAKVF 220
Query: 119 HLAKLAGIPDGVLNVVPGFGPTAGAAICSHMDIDYVCFTGSTDVGRLVMQAAA-----AS 173
+ AG P GV+N +PG G GA + H I ++ FTGS +VG + +AA +
Sbjct: 221 EIFHEAGFPPGVVNFLPGVGEEVGAYLVEHPRIRFINFTGSLEVGLKIYEAAGRLAPGQT 280
Query: 174 NLKQVSLELGGKSPLLIFDDADLDTAADVALLGNLYNKGEICVASSRVFVQEGIYDKFEK 233
K+ +E GGK+ +++ + AD D AA+ ++ +G+ C A+SR+ + +G Y+ +
Sbjct: 281 WFKRAYVETGGKNAIIVDETADFDLAAEGVVVSAYGFQGQKCSAASRLILTQGAYEPVLE 340
Query: 234 KLLEKAKAWLVGDPFDPTVRQGPQISERHFDRILSYIEHGKREGATLLTGGKPIGDKGYY 293
++L++A+ VG P + GP +S ++LSYIE GK EG L+ GGK + +GY+
Sbjct: 341 RVLKRAERLSVG-PAEENPDLGPVVSAEQERKVLSYIEIGKNEGQ-LVLGGKRLEGEGYF 398
Query: 294 IEPTIFTNVKEDMIIAKEEIFGPVMALMKFKTVEEAIKSANNTQYGLAAGIVTKDLNVAN 353
I PT+FT V IA+EEIFGPV+++++ K EA++ AN+T YGL G+ ++
Sbjct: 399 IAPTVFTEVPPKARIAQEEIFGPVLSVIRVKDFAEALEVANDTPYGLTGGVYSRKREHLE 458
Query: 354 TVSRSIRAGIIWIN--CYFGFSMDCPYGGYKMSGFGREYG-LESLYKYLQIKSV 404
R G ++ N P+GG+K+SG + G L+ L +L++K+V
Sbjct: 459 WARREFHVGNLYFNRKITGALVGVQPFGGFKLSGTNAKTGALDYLRLFLEMKAV 512
|
| >3r64_A NAD dependent benzaldehyde dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.57A {Corynebacterium glutamicum} Length = 508 | Back alignment and structure |
|---|
Score = 548 bits (1415), Expect = 0.0
Identities = 138/410 (33%), Positives = 218/410 (53%), Gaps = 12/410 (2%)
Query: 1 MWKFADLIEEHVEELAALDALDAGKVYLRAKTAEIPGAAEFLRFFAGAADKIHGEVLKMS 60
+++ A+L+EEH EE+ ++G +A EI A + A ++HG +
Sbjct: 78 IYRAAELLEEHREEIVEWLIKESGSTRSKAN-LEITLAGNITKESASFPGRVHGRIS--P 134
Query: 61 SELQG---YTLREPVGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLTALY- 116
S G R GVVG I PWNFP + V+PALA G +++KPA TP+T
Sbjct: 135 SNTPGKENRVYRVAKGVVGVISPWNFPLNLSIRSVAPALAVGNAVVIKPASDTPVTGGVI 194
Query: 117 YAHLAKLAGIPDGVLNVVPGFGPTAGAAICSHMDIDYVCFTGSTDVGRLVMQAAA-ASNL 175
A + + AG+P GV++ V G G G +H + FTGST VGR V + A +
Sbjct: 195 PARIFEEAGVPAGVISTVAGAGSEIGDHFVTHAVPKLISFTGSTPVGRRVGELAINGGPM 254
Query: 176 KQVSLELGGKSPLLIFDDADLDTAADVALLGNLYNKGEICVASSRVFVQEGIYDKFEKKL 235
K V+LELGG +P ++ DAD+D AA A +G ++G+IC++ +RV V ++D+F +K
Sbjct: 255 KTVALELGGNAPFVVLADADIDAAAQAAAVGAFLHQGQICMSINRVIVDAAVHDEFLEKF 314
Query: 236 LEKAKAWLVGDPFDPTVRQGPQISERHFDRILSYIEHGKREGATLLTGGKPIGDKGYYIE 295
+E K GDP GP I++ + IE K+EGAT+ G +G +
Sbjct: 315 VEAVKNIPTGDPSAEGTLVGPVINDSQLSGLKEKIELAKKEGATVQVEGPI---EGRLVH 371
Query: 296 PTIFTNVKEDMIIAKEEIFGPVMALMKFKTVEEAIKSANNTQYGLAAGIVTKDLNVANTV 355
P +F++V DM IA+EEIFGP+++++K A + AN + +GL+A + +KD++ A
Sbjct: 372 PHVFSDVTSDMEIAREEIFGPLISVLKADDEAHAAELANASDFGLSAAVWSKDIDRAAQF 431
Query: 356 SRSIRAGIIWINCY-FGFSMDCPYGGYKMSGFGREYGLESLYKYLQIKSV 404
+ I +G++ IN +GG K SG GR G ++ ++ + +
Sbjct: 432 ALQIDSGMVHINDLTVNDEPHVMFGGSKNSGLGRFNGDWAIEEFTTDRWI 481
|
| >3ju8_A Succinylglutamic semialdehyde dehydrogenase; alpha-beta structure, structural genomics, PSI-2, protein ST initiative; HET: NAD; 1.82A {Pseudomonas aeruginosa} Length = 490 | Back alignment and structure |
|---|
Score = 529 bits (1366), Expect = 0.0
Identities = 121/421 (28%), Positives = 187/421 (44%), Gaps = 12/421 (2%)
Query: 1 MWKFADLIEEHVEELAALDALDAGKVYLRAKTAEIPGAAEFLRFFAGAADKIHGEVLKMS 60
+ +FA ++ +ELA + + GK + T E+ + A + GE
Sbjct: 70 LERFAATLKSRADELARVIGEETGKPLWESAT-EVTSMVNKVAISVQAFRERTGEKSGPL 128
Query: 61 SELQGYTLREPVGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLTALYYAHL 120
++ +P GVV P+NFP + + PAL AG ++ KP+E TP A
Sbjct: 129 ADATAVLRHKPHGVVAVFGPYNFPGHLPNGHIVPALLAGNCVVFKPSELTPKVAELTLKA 188
Query: 121 AKLAGIPDGVLNVVPGFGPTAGAAICSHMDIDYVCFTGSTDVGRLVMQAAAASNLKQVSL 180
AG+P GVLN+V G G G A+ +H +D + FTGS+ G L+ K ++L
Sbjct: 189 WIQAGLPAGVLNLVQG-GRETGVALAAHRGLDGLFFTGSSRTGNLLHSQFGGQPQKILAL 247
Query: 181 ELGGKSPLLIFDDADLDTAADVALLGNLYNKGEICVASSRVFVQEGIY-DKFEKKLLEKA 239
E+GG +PL++ + ADLD A + + G+ C + R+ V +G + D +L+ +
Sbjct: 248 EMGGNNPLVVEEVADLDAAVYTIIQSAFISAGQRCTCARRLLVPQGAWGDALLARLVAVS 307
Query: 240 KAWLVGDPF-DPTVRQGPQISERHFDRILSYIEHGKREGATLLTGGKPIGDKGYYIEPTI 298
VG P G IS + +L EH +GA L D + P I
Sbjct: 308 ATLRVGRFDEQPAPFMGAVISLSAAEHLLKAQEHLIGKGAQPLLAMTQPIDGAALLTPGI 367
Query: 299 FTNVKEDMIIAKEEIFGPVMALMKFKTVEEAIKSANNTQYGLAAGIVTKDLNVANTVSRS 358
+V EE FGP++ ++++ AI+ AN TQYGLAAG+++
Sbjct: 368 L-DVSAVAERPDEEFFGPLLQVIRYSDFAAAIREANATQYGLAAGLLSDSRERFEQFLVE 426
Query: 359 IRAGIIWIN-CYFGFSMDCPYGGYKMSGFGRE---YGLESL---YKYLQIKSVVTPIYNS 411
RAGI+ N G + P+GG SG R Y + L+ SV P +
Sbjct: 427 SRAGIVNWNKQLTGAASSAPFGGIGASGNHRPSAYYAADYCAYPVASLESPSVSLPATLT 486
Query: 412 P 412
P
Sbjct: 487 P 487
|
| >1uxt_A Glyceraldehyde-3-phosphate dehydrogenase (NADP+); GAPN, ALDH, glucose 1-phosphate, glycolysis, regulation, catatysis, oxidoreductase; HET: G1P NAD; 2.2A {Thermoproteus tenax} SCOP: c.82.1.1 PDB: 1uxp_A* 1uxq_A* 1uxr_A* 1uxn_A* 1uxu_A* 1uxv_A* 1ky8_A* Length = 501 | Back alignment and structure |
|---|
Score = 529 bits (1364), Expect = 0.0
Identities = 128/417 (30%), Positives = 202/417 (48%), Gaps = 22/417 (5%)
Query: 1 MWKFADLIEEHVEELAALDALDAGKVYLRAKTAEIPGAAEFLRFFAGAADKIHGEVLKMS 60
+ K AD+IE +++ A + ++AGK A E+ A + LR KI G+ +
Sbjct: 83 LRKAADIIERNLDVFAEVLVMNAGKPKSAAV-GEVKAAVDRLRLAELDLKKIGGDYIPGD 141
Query: 61 SELQG-----YTLREPVGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLTAL 115
REP+GVV I P+N+P K++ + G ++VKP+ PL A
Sbjct: 142 WTYDTLETEGLVRREPLGVVAAITPFNYPLFDAVNKITYSFIYGNAVVVKPSISDPLPAA 201
Query: 116 YYAHLAKLAGIPDGVLNVVPGFGPTAGAAICSHMDIDYVCFTGSTDVGRLVMQAAAASNL 175
AG P + ++ G I + + V FTGST+VG V++ +
Sbjct: 202 MAVKALLDAGFPPDAIALLNLPGKE-AEKIVADDRVAAVSFTGSTEVGERVVKVGG---V 257
Query: 176 KQVSLELGGKSPLLIFDDADLDTAADVALLGNLYNKGEICVASSRVFVQEGIYDKFEKKL 235
KQ +ELGG P ++ +DADLD AAD G G+ C A V + +Y K +++
Sbjct: 258 KQYVMELGGGDPAIVLEDADLDLAADKIARGIYSYAGQRCDAIKLVLAERPVYGKLVEEV 317
Query: 236 LEKAKAWLVGDPFDPTVRQGPQISERHFDRILSYIEHGKREGATLLTGGKPIGDKGYYIE 295
++ + VGDP DPTV GP IS D +++ IE +G +L GG+ +G Y++
Sbjct: 318 AKRLSSLRVGDPRDPTVDVGPLISPSAVDEMMAAIEDAVEKGGRVLAGGRRLG--PTYVQ 375
Query: 296 PTIF---TNVKEDMIIAKEEIFGPVMALMKFKTVEEAIKSANNTQYGLAAGIVTKDLNVA 352
PT + +DM++ K E+F PV ++ K +++AI+ AN YGL A + +D+
Sbjct: 376 PTFVEAPADRVKDMVLYKREVFAPVALAVEVKDLDQAIELANGRPYGLDAAVFGRDVVKI 435
Query: 353 NTVSRSIRAGIIWINCYFGFSMD-CPYGGYKMSGFGRE---YGLESLYKYLQIKSVV 405
R + G I+IN + P+GG K SG RE Y +E+ K++V
Sbjct: 436 RRAVRLLEVGAIYINDMPRHGIGYYPFGGRKKSGVFREGIGYAVEA---VTAYKTIV 489
|
| >3prl_A NADP-dependent glyceraldehyde-3-phosphate dehydro; structural genomics, protein structure initiative, dehydroge PSI-biology; 2.00A {Bacillus halodurans} PDB: 3rhh_A* Length = 505 | Back alignment and structure |
|---|
Score = 521 bits (1345), Expect = 0.0
Identities = 138/415 (33%), Positives = 200/415 (48%), Gaps = 21/415 (5%)
Query: 1 MWKFADLIEEHVEELAALDALDAGKVYLRAKTAEIPGAAEFLRFFAGAADKIHGEVLKMS 60
++ +ADL+EE E + L + K A E+ A+ +R A A +++GE LK
Sbjct: 77 LYAWADLLEERKEIIGELIMHEVAKPKKSAI-GEVSRTADIIRHTADEALRLNGETLKGD 135
Query: 61 SELQG------YTLREPVGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLTA 114
G REP+GVV I P+N+P + K++PAL G T++ KPA Q L+
Sbjct: 136 QFKGGSSKKIALVEREPLGVVLAISPFNYPVNLAAAKIAPALVTGNTVVFKPATQGSLSG 195
Query: 115 LYYAHLAKLAGIPDGVLNVVPGFGPTAGAAICSHMDIDYVCFTGSTDVGRLVMQAAAASN 174
+ AG P+G++ VV G G G + H ID + FTG T G + + A
Sbjct: 196 IKMVEALADAGAPEGIIQVVTGRGSVIGDHLVEHPGIDMITFTGGTTTGERISEKA---K 252
Query: 175 LKQVSLELGGKSPLLIFDDADLDTAADVALLGNLYNKGEICVASSRVFVQEGIYDKFEKK 234
+ V LELGGK P ++ DDADL A + G G+ C A RVFVQ+ + D+
Sbjct: 253 MIPVVLELGGKDPAIVLDDADLKLTASQIVSGAFSYSGQRCTAIKRVFVQDSVADQLVAN 312
Query: 235 LLEKAKAWLVGDPFDPTVRQGPQISERHFDRILSYIEHGKREGATLLTGGKPIGDKGYYI 294
+ E + VG P D P I E+ I I+ GATLL+G K +G +
Sbjct: 313 IKELVEQLTVGSPEDDAD-ITPVIDEKSAAFIQGLIDDALENGATLLSGNKR---QGNLL 368
Query: 295 EPTIFTNVKEDMIIAKEEIFGPVMALMKFKTVEEAIKSANNTQYGLAAGIVTKDLNVANT 354
PT+ +V M +A EE FGPV+ +++ K EAI +N + YGL A I TKD + A
Sbjct: 369 SPTLLDDVTPAMRVAWEEPFGPVLPIIRVKDANEAISLSNQSDYGLQASIFTKDTDRAIN 428
Query: 355 VSRSIRAGIIWINCYFGFSMDC-PYGGYKMSGFGRE---YGLESLYKYLQIKSVV 405
+ + + G + IN D P+ G K SG G + L S + + V
Sbjct: 429 IGKHLEVGTVHINAKTERGPDHFPFLGVKKSGLGVQGIKPSLLS---MTRERVTV 480
|
| >3pqa_A Lactaldehyde dehydrogenase; structural genomics, protein structure initiative, nysgrc, P biology, oxidoreductase; 1.50A {Methanocaldococcus jannaschii} PDB: 3rhd_A* Length = 486 | Back alignment and structure |
|---|
Score = 519 bits (1340), Expect = 0.0
Identities = 140/413 (33%), Positives = 215/413 (52%), Gaps = 21/413 (5%)
Query: 1 MWKFADLIEEHVEELAALDALDAGKVYLRAKTAEIPGAAEFLRFFAGAADKIHGEVLKMS 60
+ A I+E EELA + A+DAGK +A+ E+ + + A + EV+
Sbjct: 62 LMNIAKQIKEKKEELAKILAIDAGKPIKQAR-VEVERSIGTFKLAAFYVKEHRDEVIPSD 120
Query: 61 SELQGYTLREPVGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLTALYYAHL 120
L +T REPVG+VG I P+NFP + K++PA+A G ++ P+ + PL + A +
Sbjct: 121 DRL-IFTRREPVGIVGAITPFNFPLNLSAHKIAPAIATGNVIVHHPSSKAPLVCIELAKI 179
Query: 121 AKLA----GIPDGVLNVVPGFGPTAGAAICSHMDIDYVCFTGSTDVGRLVMQAAAASNLK 176
+ A +P GV N++ G G G I + ++ + FTGS+ VG L+ + A K
Sbjct: 180 IENALKKYNVPLGVYNLLTGAGEVVGDEIVVNEKVNMISFTGSSKVGELITKKAG---FK 236
Query: 177 QVSLELGGKSPLLIFDDADLDTAADVALLGNLYNKGEICVASSRVFVQEGIYDKFEKKLL 236
+++LELGG +P ++ DADL+ A + + G+ G++C++ + V E I DKF + +
Sbjct: 237 KIALELGGVNPNIVLKDADLNKAVNALIKGSFIYAGQVCISVGMILVDESIADKFIEMFV 296
Query: 237 EKAKAWLVGDPFDPTVRQGPQISERHFDRILSYIEHGKREGATLLTGGKPIGDKGYYIEP 296
KAK VG+P D GP IS H + + +E EG LL GGK P
Sbjct: 297 NKAKVLNVGNPLDEKTDVGPLISVEHAEWVEKVVEKAIDEGGKLLLGGKR---DKALFYP 353
Query: 297 TIFTNVKEDMIIAKEEIFGPVMALMKFKTVEEAIKSANNTQYGLAAGIVTKDLNVANTVS 356
TI V D I+ K E F PV+ +++ EE I AN+T+YGL + I T D+N + +
Sbjct: 354 TIL-EVDRDNILCKTETFAPVIPIIRTNE-EEMIDIANSTEYGLHSAIFTNDINKSLKFA 411
Query: 357 RSIRAGIIWINCYFGFSMD-CPYGGYKMSGFGRE---YGLESLYKYLQIKSVV 405
++ G + IN F D P+GG K SG GRE Y +E IK+++
Sbjct: 412 ENLEFGGVVINDSSLFRQDNMPFGGVKKSGLGREGVKYAMEE---MSNIKTII 461
|
| >2y53_A Aldehyde dehydrogenase (BOX pathway); oxidoreductase, NADP, nucleotide-binding; HET: NAP; 1.40A {Burkholderia xenovorans LB400} PDB: 2y52_A 2y51_A 2vro_A* 2y5d_A* Length = 534 | Back alignment and structure |
|---|
Score = 502 bits (1294), Expect = e-176
Identities = 85/448 (18%), Positives = 156/448 (34%), Gaps = 48/448 (10%)
Query: 1 MWKFADLIEEHVEELAALDALDAGKVYLRAKTAEIPGAAEFLRFFAGAADKIHGEVLKMS 60
+ L++ + A+ ++G + +I G L ++A +
Sbjct: 72 LADIVKLLQAKRGDYYAIATANSGTTRNDSA-VDIDGGIFTLSYYAKLGASLGEVHALRD 130
Query: 61 SELQG----------YTLREPVGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQT 110
+ + L GV I +NFP+ + K +PAL +G +IVKPA T
Sbjct: 131 GSAESLSKDRSFSAQHVLSPTRGVALFINAFNFPSWGLWEKAAPALLSGVPVIVKPATAT 190
Query: 111 PLTALYYAHLAKLAGI-PDGVLNVVPGFGPTAGAAICSHMDIDYVCFTGSTDVGRLVMQA 169
AGI P G L+++ G ++ + D V FTGS D +
Sbjct: 191 AWLTQRMVADVVDAGILPPGALSIICG---SSAGLLDQIRSFDVVSFTGSADTAATLRAH 247
Query: 170 AAAS-NLKQVSLELGGKSPLLIFDDAD-----LDTAADVALLGNLYNKGEICVASSRVFV 223
A +++++ + ++ DA D + G+ C A R FV
Sbjct: 248 PAFVQRGARLNVQADSLNSAILCADATPDTPAFDLFIKEVVREMTVKSGQKCTAIRRAFV 307
Query: 224 QEGIYDKFEKKLLEKAKAWLVGDPFDPTVRQGPQISERHFDRILSYIEHGKREGATLLTG 283
E + + L K VG+P + VR G +S ++ +L+ I + E
Sbjct: 308 PEAALEPVLEALKAKLAKITVGNPRNDAVRMGSLVSREQYENVLAGIAALREEAVLAYDS 367
Query: 284 GK-----PIGDKGYYIEPTIF--TNVKEDMIIAKEEIFGPVMALMKFKTV--------EE 328
+ + P +F + ++ E+FGPV ++ ++
Sbjct: 368 SAVPLIDADANIAACVAPHLFVVNDPDNATLLHDVEVFGPVASVAPYRVTTDTNALPEAH 427
Query: 329 AIKSANNTQYGLAAGIVTKDLNVANTVSRSIRAGIIWINCYFGFSMD-----------CP 377
A+ A Q L A I + D ++ + ++
Sbjct: 428 AVALARRGQGSLVASIYSNDDAHLGRLALELADSHGRVHAISPSVQHSQTGHGNVMPMSL 487
Query: 378 YGGYKMSGFGREY-GLESLYKYLQIKSV 404
+GG +G G E GL +L Y + ++
Sbjct: 488 HGGPGRAGGGEELGGLRALAFYHRRSAI 515
|
| >1euh_A NADP dependent non phosphorylating glyceraldehyde-3-phosphate dehydrogenase; oxidoreductase; 1.82A {Streptococcus mutans} SCOP: c.82.1.1 PDB: 1qi6_A 2euh_A* 2id2_A* 2qe0_A* 2esd_A* 1qi1_A* Length = 475 | Back alignment and structure |
|---|
Score = 486 bits (1253), Expect = e-171
Identities = 137/415 (33%), Positives = 209/415 (50%), Gaps = 21/415 (5%)
Query: 1 MWKFADLIEEHVEELAALDALDAGKVYLRAKTAEIPGAAEFLRFFAGAADKIHGEVLKMS 60
+ K AD++ E++ A+ + + K Y A +E+ AE + + A ++ GEVL+
Sbjct: 68 LHKVADILMRDKEKIGAILSKEVAKGYKSAV-SEVVRTAEIINYAAEEGLRMEGEVLEGG 126
Query: 61 SEL------QGYTLREPVGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLTA 114
S REPVG+V I P+N+P + K++PAL AG + KP Q ++
Sbjct: 127 SFEAASKKKIAVVRREPVGLVLAISPFNYPVNLAGSKIAPALIAGNVIAFKPPTQGSISG 186
Query: 115 LYYAHLAKLAGIPDGVLNVVPGFGPTAGAAICSHMDIDYVCFTGSTDVGRLVMQAAAASN 174
L A AG+P GV N + G G G I H ++++ FTGST +G + + A
Sbjct: 187 LLLAEAFAEAGLPAGVFNTITGRGSEIGDYIVEHQAVNFINFTGSTGIGERIGKMAG--- 243
Query: 175 LKQVSLELGGKSPLLIFDDADLDTAADVALLGNLYNKGEICVASSRVFVQEGIYDKFEKK 234
++ + LELGGK ++ +DADL+ A + G G+ C A RV V E + D+ +K
Sbjct: 244 MRPIMLELGGKDSAIVLEDADLELTAKNIIAGAFGYSGQRCTAVKRVLVMESVADELVEK 303
Query: 235 LLEKAKAWLVGDPFDPTVRQGPQISERHFDRILSYIEHGKREGATLLTGGKPIGDKGYYI 294
+ EK A +G+P D P I + D + I +GAT LT K +G I
Sbjct: 304 IREKVLALTIGNPEDDAD-ITPLIDTKSADYVEGLINDANDKGATALTEIKR---EGNLI 359
Query: 295 EPTIFTNVKEDMIIAKEEIFGPVMALMKFKTVEEAIKSANNTQYGLAAGIVTKDLNVANT 354
P +F V DM +A EE FGPV+ +++ +VEEAI+ +N ++YGL A I T D A
Sbjct: 360 CPILFDKVTTDMRLAWEEPFGPVLPIIRVTSVEEAIEISNKSEYGLQASIFTNDFPRAFG 419
Query: 355 VSRSIRAGIIWINCYFGFSMD-CPYGGYKMSGFGRE---YGLESLYKYLQIKSVV 405
++ + G + IN D P+ G K SG G + Y +E+ +KSVV
Sbjct: 420 IAEQLEVGTVHINNKTQRGTDNFPFLGAKKSGAGIQGVKYSIEA---MTTVKSVV 471
|
| >2imp_A Lactaldehyde dehydrogenase; protein-lactate-NADH ternary complex, oxidoreductase; HET: NAI; 2.10A {Escherichia coli} PDB: 2ilu_A* 2hg2_A* 2opx_A* Length = 479 | Back alignment and structure |
|---|
Score = 477 bits (1229), Expect = e-167
Identities = 142/406 (34%), Positives = 227/406 (55%), Gaps = 4/406 (0%)
Query: 1 MWKFADLIEEHVEELAALDALDAGKVYLRAKTAEIPGAAEFLRFFAGAADKIHGEVL-KM 59
+ K + I E E++AL + GK+ A+ E+ A+++ + A A + GE++
Sbjct: 72 LRKISAGIRERASEISALIVEEGGKIQQLAE-VEVAFTADYIDYMAEWARRYEGEIIQSD 130
Query: 60 SSELQGYTLREPVGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLTALYYAH 119
+ +GV I+PWNFP + K++PAL G T+++KP+E TP A+ +A
Sbjct: 131 RPGENILLFKRALGVTTGILPWNFPFFLIARKMAPALLTGNTIVIKPSEFTPNNAIAFAK 190
Query: 120 LAKLAGIPDGVLNVVPGFGPTAGAAICSHMDIDYVCFTGSTDVGRLVMQAAAASNLKQVS 179
+ G+P GV N+V G G T G + + + V TGS G +M A AA N+ +V
Sbjct: 191 IVDEIGLPRGVFNLVLGRGETVGQELAGNPKVAMVSMTGSVSAGEKIM-ATAAKNITKVC 249
Query: 180 LELGGKSPLLIFDDADLDTAADVALLGNLYNKGEICVASSRVFVQEGIYDKFEKKLLEKA 239
LELGGK+P ++ DDADL+ A + + N G++C + RV+VQ+GIYD+F +L E
Sbjct: 250 LELGGKAPAIVMDDADLELAVKAIVDSRVINSGQVCNCAERVYVQKGIYDQFVNRLGEAM 309
Query: 240 KAWLVGDPFD-PTVRQGPQISERHFDRILSYIEHGKREGATLLTGGKPIGDKGYYIEPTI 298
+A G+P + + GP I+ +R+ + EGA + GGK + KGYY PT+
Sbjct: 310 QAVQFGNPAERNDIAMGPLINAAALERVEQKVARAVEEGARVAFGGKAVEGKGYYYPPTL 369
Query: 299 FTNVKEDMIIAKEEIFGPVMALMKFKTVEEAIKSANNTQYGLAAGIVTKDLNVANTVSRS 358
+V+++M I EE FGPV+ ++ F T+E+AI AN++ YGL + I T++LNVA +
Sbjct: 370 LLDVRQEMSIMHEETFGPVLPVVAFDTLEDAISMANDSDYGLTSSIYTQNLNVAMKAIKG 429
Query: 359 IRAGIIWINCYFGFSMDCPYGGYKMSGFGREYGLESLYKYLQIKSV 404
++ G +IN +M + G++ SG G G L++YLQ + V
Sbjct: 430 LKFGETYINRENFEAMQGFHAGWRKSGIGGADGKHGLHEYLQTQVV 475
|
| >4dng_A Uncharacterized aldehyde dehydrogenase ALDY; structural genomics, protein structure initiative, nysgrc, P biology; 2.50A {Bacillus subtilis} Length = 485 | Back alignment and structure |
|---|
Score = 447 bits (1152), Expect = e-155
Identities = 120/409 (29%), Positives = 205/409 (50%), Gaps = 11/409 (2%)
Query: 1 MWKFADLIEEHVEELAALDALDAGKVYLRAKTAEIPGAAEFLRFFAGAADKIHGEVLKMS 60
+ K + E+ +++ + A + G +++ E+ L ++ G +
Sbjct: 72 LQKARGYLHENRDDIIMMIARETGGTIIKST-IELEQTIAILDEAMTYTGELGGVKE-VP 129
Query: 61 SELQG---YTLREPVGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLTA-LY 116
S+++G R P+GV+ I P+NFP + ++PA+A G +++ KP QT ++
Sbjct: 130 SDIEGKTNKIYRLPLGVISSISPFNFPMNLSMRSIAPAIALGNSVVHKPDIQTAISGGTI 189
Query: 117 YAHLAKLAGIPDGVLNVVPGFGPTAGAAICSHMDIDYVCFTGSTDVGRLVMQAAAASNLK 176
A + AG+P GVLNV+ G + ++ + FTGST VGR + A K
Sbjct: 190 IAKAFEHAGLPAGVLNVMLTDVKEIGDGMLTNPIPRLISFTGSTAVGRHIG-EIAGRAFK 248
Query: 177 QVSLELGGKSPLLIFDDADLDTAADVALLGNLYNKGEICVASSRVFVQEGIYDKFEKKLL 236
+++LELGG +P + DAD+D A D A+ G ++G+IC+ +R+ V + +YD+F +K
Sbjct: 249 RMALELGGNNPFAVLSDADVDRAVDAAIFGKFIHQGQICMIINRIIVHQDVYDEFVEKFT 308
Query: 237 EKAKAWLVGDPFDPTVRQGPQISERHFDRILSYIEHGKREGATLLTGGKPIGDKGYYIEP 296
+ K GD DP GP I+ER ++ L IE K +G L GK G + P
Sbjct: 309 ARVKQLPYGDQTDPKTVVGPLINERQIEKALEIIEQAKTDGIELAVEGKR---VGNVLTP 365
Query: 297 TIFTNVKEDMIIAKEEIFGPVMALMKFKTVEEAIKSANNTQYGLAAGIVTKDLNVANTVS 356
+F + IA+ E+F P+ ++K + +EAI AN+T+YGL++ + T DL +
Sbjct: 366 YVFVGADNNSKIAQTELFAPIATIIKAGSDQEAIDMANDTEYGLSSAVFTSDLEKGEKFA 425
Query: 357 RSIRAGIIWINCY-FGFSMDCPYGGYKMSGFGREYGLESLYKYLQIKSV 404
I +G+ +N S + +GG K SG GR + ++ K +
Sbjct: 426 LQIDSGMTHVNDQSVNDSPNIAFGGNKASGVGRFGNPWVVEEFTVTKWI 474
|
| >3k2w_A Betaine-aldehyde dehydrogenase; structural genomics, PSI-2, protein initiative; 1.90A {Pseudoalteromonas atlantica T6C} Length = 497 | Back alignment and structure |
|---|
Score = 442 bits (1140), Expect = e-153
Identities = 148/412 (35%), Positives = 226/412 (54%), Gaps = 13/412 (3%)
Query: 1 MWKFADLIEEHVEELAALDALDAGKVYLRAKTAEIPGAAEFLRFFAGAADKIHGEVLKMS 60
+ FA+ I E+ LA + + GK+ A+ E+ A F+ + A I G++L
Sbjct: 78 LRTFANKIRENKHILAPMLVAEQGKLLSVAE-MEVDVTATFIDYGCDNALTIEGDILPSD 136
Query: 61 SE-LQGYTLREPVGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLTALYYAH 119
++ + Y + P GVV I WNFP + K+ PAL G TM++KP ++TPL
Sbjct: 137 NQDEKIYIHKVPRGVVVGITAWNFPLALAGRKIGPALITGNTMVLKPTQETPLATTELGR 196
Query: 120 LAKLAGIPDGVLNVVPGFGPTAGAAICSHMDIDYVCFTGSTDVGRLVMQAAAASNLKQVS 179
+AK AG+PDGVLNV+ G G G +C + TGST G+ + +A + V
Sbjct: 197 IAKEAGLPDGVLNVINGTGSVVGQTLCESPITKMITMTGSTVAGKQIY-KTSAEYMTPVM 255
Query: 180 LELGGKSPLLIFDDADLDTAADVALLGNLYNKGEICVASSRVFVQEGIYDKFEKKLLEKA 239
LELGGK+P+++ DDADLD AA+ AL G N G++C R++V +YD+F K L
Sbjct: 256 LELGGKAPMVVMDDADLDKAAEDALWGRFANCGQVCTCVERLYVHASVYDEFMAKFLPLV 315
Query: 240 KAWLVGDPFDPTVRQGPQISERHFDRILSYIEHGKREGATLLTGGKPI----GDKGYYIE 295
K VGDP D + GP+ ++R D I + ++GAT+ TGGK + G + E
Sbjct: 316 KGLKVGDPMDADSQMGPKCNQREIDNIDHIVHEAIKQGATVATGGKTATVEGFEGGCWYE 375
Query: 296 PTIFTNVKEDMIIAKEEIFGPVMALMKFKTVEEAIKSANNTQYGLAAGIVTKDLNVANTV 355
PT+ +VK+D I+ EE FGP++ ++K ++E+AI+ N++ YGL+A + T+ N
Sbjct: 376 PTVLVDVKQDNIVVHEETFGPILPIVKVSSMEQAIEFCNDSIYGLSAYVHTQSFANINQA 435
Query: 356 SRSIRAGIIWINCYFGFSMDCPYGGYKMSGFGRE---YGLESLYKYLQIKSV 404
+ G ++IN G + G+K SGFG E +GLE +YL+ K+V
Sbjct: 436 ISDLEVGEVYINRGMGEQHQGFHNGWKQSGFGGEDGKFGLE---QYLEKKTV 484
|
| >2j6l_A Aldehyde dehydrogenase family 7 member A1; NAD, reductase, oxidoreductase, lysine catabolism; HET: NAI; 1.3A {Homo sapiens} PDB: 2jg7_A* Length = 500 | Back alignment and structure |
|---|
Score = 438 bits (1129), Expect = e-152
Identities = 117/414 (28%), Positives = 198/414 (47%), Gaps = 15/414 (3%)
Query: 1 MWKFADLIEEHVEELAALDALDAGKVYLRAKTAEIPGAAEFLRFFAGAADKIHGEVLKMS 60
+ + D + E ++ L +L +L+ GK+ + E+ + + G + I G + +
Sbjct: 87 VRQIGDALREKIQVLGSLVSLEMGKILVEGV-GEVQEYVDICDYAVGLSRMIGGPI--LP 143
Query: 61 SELQG---YTLREPVGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLTALYY 117
SE G PVG+VG I +NFP ++ + A+ G + K A T L ++
Sbjct: 144 SERSGHALIEQWNPVGLVGIITAFNFPVAVYGWNNAIAMICGNVCLWKGAPTTSLISVAV 203
Query: 118 AHLA----KLAGIPDGVLNVVPGFGPTAGAAICSHMDIDYVCFTGSTDVGRLVMQAAAAS 173
+ + +P + ++ G G G A+ ++ + FTGST VG+ V
Sbjct: 204 TKIIAKVLEDNKLPGAICSLTCG-GADIGTAMAKDERVNLLSFTGSTQVGKQVGLMVQER 262
Query: 174 NLKQVSLELGGKSPLLIFDDADLDTAADVALLGNLYNKGEICVASSRVFVQEGIYDKFEK 233
+ LELGG + ++ F+DADL AL + G+ C + R+F+ E I+D+
Sbjct: 263 -FGRSLLELGGNNAIIAFEDADLSLVVPSALFAAVGTAGQRCTTARRLFIHESIHDEVVN 321
Query: 234 KLLEKAKAWLVGDPFDPTVRQGPQISERHFDRILSYIEHGKREGATLLTGGKPIGDKGYY 293
+L + VG+P+DP V GP +++ L +E K+EG T++ GGK + G Y
Sbjct: 322 RLKKAYAQIRVGNPWDPNVLYGPLHTKQAVSMFLGAVEEAKKEGGTVVYGGKVMDRPGNY 381
Query: 294 IEPTIFTNVKEDMIIAKEEIFGPVMALMKFKTVEEAIKSANNTQYGLAAGIVTKDLNVAN 353
+EPTI T + D IA E F P++ + KF+ EE N + GL++ I TKDL
Sbjct: 382 VEPTIVTGLGHDASIAHTETFAPILYVFKFQNEEEVFAWNNEVKQGLSSSIFTKDLGRIF 441
Query: 354 TV--SRSIRAGIIWINCY-FGFSMDCPYGGYKMSGFGREYGLESLYKYLQIKSV 404
+ GI+ +N G + +GG K +G GRE G ++ +Y++ +
Sbjct: 442 RWLGPKGSDCGIVNVNIPTSGAEIGGAFGGEKHTGGGRESGSDAWKQYMRRSTC 495
|
| >3jz4_A Succinate-semialdehyde dehydrogenase [NADP+]; tetramer, NADP binding, oxidoreductase; HET: NAP; 2.30A {Escherichia coli} Length = 481 | Back alignment and structure |
|---|
Score = 437 bits (1127), Expect = e-152
Identities = 162/408 (39%), Positives = 239/408 (58%), Gaps = 9/408 (2%)
Query: 1 MWKFADLIEEHVEELAALDALDAGKVYLRAKTAEIPGAAEFLRFFAGAADKIHGEVLKMS 60
+ + +L+ EH ++LA L L+ GK AK EI AA F+ +FA +I+G+ +
Sbjct: 75 LRNWFNLMMEHQDDLARLMTLEQGKPLAEAK-GEISYAASFIEWFAEEGKRIYGDTIPGH 133
Query: 61 S-ELQGYTLREPVGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLTALYYAH 119
+ + +++P+GV I PWNFP M K PALAAGCTM++KPA QTP +AL A
Sbjct: 134 QADKRLIVIKQPIGVTAAITPWNFPAAMITRKAGPALAAGCTMVLKPASQTPFSALALAE 193
Query: 120 LAKLAGIPDGVLNVVPGFGPTAGAAICSHMDIDYVCFTGSTDVGRLVMQAAAASNLKQVS 179
LA AG+P GV NVV G G + S+ + + FTGST++GR +M A ++K+VS
Sbjct: 194 LAIRAGVPAGVFNVVTGSAGAVGNELTSNPLVRKLSFTGSTEIGRQLM-EQCAKDIKKVS 252
Query: 180 LELGGKSPLLIFDDADLDTAADVALLGNLYNKGEICVASSRVFVQEGIYDKFEKKLLEKA 239
LELGG +P ++FDDADLD A + AL N G+ CV ++R++VQ+G+YD+F +KL +
Sbjct: 253 LELGGNAPFIVFDDADLDKAVEGALASKFRNAGQTCVCANRLYVQDGVYDRFAEKLQQAM 312
Query: 240 KAWLVGDPFDPTVRQGPQISERHFDRILSYIEHGKREGATLLTGGKPIGDKGYYIEPTIF 299
+GD D V GP I E+ ++ +I +GA ++ GGK G + +PTI
Sbjct: 313 SKLHIGDGLDNGVTIGPLIDEKAVAKVEEHIADALEKGARVVCGGKAHERGGNFFQPTIL 372
Query: 300 TNVKEDMIIAKEEIFGPVMALMKFKTVEEAIKSANNTQYGLAAGIVTKDLNVANTVSRSI 359
+V + ++KEE FGP+ L +FK + I AN+T++GLAA +DL+ V ++
Sbjct: 373 VDVPANAKVSKEETFGPLAPLFRFKDEADVIAQANDTEFGLAAYFYARDLSRVFRVGEAL 432
Query: 360 RAGIIWINCYFGFSMDCPYGGYKMSGFGRE---YGLESLYKYLQIKSV 404
GI+ IN + P+GG K SG GRE YG+E YL+IK +
Sbjct: 433 EYGIVGINTGIISNEVAPFGGIKASGLGREGSKYGIED---YLEIKYM 477
|
| >3ifg_A Succinate-semialdehyde dehydrogenase (NADP+); niaid,.infectious disease, ssgcid, seattle structural genomi for infectious disease; 2.70A {Burkholderia pseudomallei} PDB: 3ifh_Q Length = 484 | Back alignment and structure |
|---|
Score = 437 bits (1126), Expect = e-151
Identities = 162/412 (39%), Positives = 239/412 (58%), Gaps = 9/412 (2%)
Query: 1 MWKFADLIEEHVEELAALDALDAGKVYLRAKTAEIPGAAEFLRFFAGAADKIHGEVLKMS 60
+ ++ DL+ + ++LA + + GK AK EI AA F+ +FA ++ G+ L
Sbjct: 78 LRRWFDLVIANSDDLALILTTEQGKPLAEAK-GEIAYAASFIEWFAEEGKRVAGDTLPTP 136
Query: 61 S-ELQGYTLREPVGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLTALYYAH 119
+ ++EP+GV I PWNFP M KV PALAAGC ++VKPAE TP +AL A
Sbjct: 137 DANKRIVVVKEPIGVCAAITPWNFPAAMIARKVGPALAAGCPIVVKPAESTPFSALAMAF 196
Query: 120 LAKLAGIPDGVLNVVPGFGPTAGAAICSHMDIDYVCFTGSTDVGRLVMQAAAASNLKQVS 179
LA+ AG+P GVL+VV G G I S+ + + FTGST VGRL+M A +A +K+++
Sbjct: 197 LAERAGVPKGVLSVVIGDPKAIGTEITSNPIVRKLSFTGSTAVGRLLM-AQSAPTVKKLT 255
Query: 180 LELGGKSPLLIFDDADLDTAADVALLGNLYNKGEICVASSRVFVQEGIYDKFEKKLLEKA 239
LELGG +P ++FDDADLD A + A+ N G+ CV ++R FV E +YD F KL
Sbjct: 256 LELGGNAPFIVFDDADLDAAVEGAIASKYRNNGQTCVCTNRFFVHERVYDAFADKLAAAV 315
Query: 240 KAWLVGDPFDPTVRQGPQISERHFDRILSYIEHGKREGATLLTGGKPIGDKGYYIEPTIF 299
VG + GP I+E ++ S+I +GA+L+TGGK + EPT+
Sbjct: 316 SKLKVGRGTESGATLGPLINEAAVKKVESHIADALAKGASLMTGGKRHALGHGFFEPTVL 375
Query: 300 TNVKEDMIIAKEEIFGPVMALMKFKTVEEAIKSANNTQYGLAAGIVTKDLNVANTVSRSI 359
T VK DM +AKEE FGP+ L +F + EE ++ AN+T++GLAA + ++D+ V+ ++
Sbjct: 376 TGVKPDMDVAKEETFGPLAPLFRFASEEELVRLANDTEFGLAAYLYSRDIGRVWRVAEAL 435
Query: 360 RAGIIWINCYFGFSMDCPYGGYKMSGFGRE---YGLESLYKYLQIKSVVTPI 408
G++ IN + P+GG K SG GRE YG++ Y+ IK + +
Sbjct: 436 EYGMVGINTGLISNEVAPFGGVKQSGLGREGSHYGID---DYVVIKYLCVAV 484
|
| >4f9i_A Proline dehydrogenase/delta-1-pyrroline-5-carboxy dehydrogenase; proline utilization A, PUTA, flavoenzyme, structural genomic biology; HET: FAD MES; 2.20A {Geobacter sulfurreducens} Length = 1026 | Back alignment and structure |
|---|
Score = 453 bits (1168), Expect = e-151
Identities = 137/413 (33%), Positives = 214/413 (51%), Gaps = 11/413 (2%)
Query: 1 MWKFADLIEEHVEELAALDALDAGKVYLRAKTAEIPGAAEFLRFFAGAADKIHGEV-LKM 59
+ K A + + EL+A L+ GK + +A A++ A +FL ++A ++ +
Sbjct: 596 LLKAAQAARKRLFELSAWQVLEIGKQWDQAY-ADVTEAIDFLEYYAREMIRLGQPQRVGH 654
Query: 60 SSELQGYTLREPVGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLTALYYAH 119
+ + EP GV I PWNFP + S A+ G ++ KP+ T + +
Sbjct: 655 APGELNHYFYEPKGVAAVIAPWNFPLAISMGMASAAIVTGNCVVFKPSGITSIIGWHLVE 714
Query: 120 LAKLAGIPDGVLNVVPGFGPTAGAAICSHMDIDYVCFTGSTDVGRLVMQAAAA-----SN 174
L + AG+P+GV N PG G G + H DI + FTGS + G +++ AA +N
Sbjct: 715 LFREAGLPEGVFNFTPGRGSVMGDYLVDHPDISLIAFTGSMETGLRIIERAAKVHPGQAN 774
Query: 175 LKQVSLELGGKSPLLIFDDADLDTAADVALLGNLYNKGEICVASSRVFVQEGIYDKFEKK 234
+K++ E+GGK+ ++I DDADLD A L +G+ C A SRV V + +YDKF ++
Sbjct: 775 VKKIISEMGGKNAIIIDDDADLDEAVPHVLYSAFGFQGQKCSACSRVIVLDAVYDKFIER 834
Query: 235 LLEKAKAWLVGDPFDPTVRQGPQISERHFDRILSYIEHGKREGATLLTGGKPIGDKGYYI 294
L+ AKA VG DP G ++ I Y E GKREG L P +GY++
Sbjct: 835 LVSMAKATKVGPSEDPANYMGAVADDKAMKSIKEYAEIGKREGHVLYESPVP-AGEGYFV 893
Query: 295 EPTIFTNVKEDMIIAKEEIFGPVMALMKFKTVEEAIKSANNTQYGLAAGIVTKDLNVANT 354
TI +K + IA+EEIFGPV+A+M+ K ++AI+ AN+TQ+ L GI ++
Sbjct: 894 PMTIIGGIKPEHRIAQEEIFGPVLAVMRAKDFDQAIEWANSTQFALTGGIFSRSPEHLAK 953
Query: 355 VSRSIRAGIIWINCYFGFSMD--CPYGGYKMSGFG-REYGLESLYKYLQIKSV 404
R R G ++IN ++ P+GG +MSG G + G + L ++ + V
Sbjct: 954 ARREFRVGNLYINRNNTGALVERQPFGGARMSGVGTKAGGPDYLLHFMDPRVV 1006
|
| >3ek1_A Aldehyde dehydrogenase; ssgcid, oxidoreductase, structural genomics; HET: MES; 2.10A {Brucella melitensis biovar ABORTUS2308} Length = 504 | Back alignment and structure |
|---|
Score = 436 bits (1123), Expect = e-151
Identities = 175/408 (42%), Positives = 249/408 (61%), Gaps = 11/408 (2%)
Query: 1 MWKFADLIEEHVEELAALDALDAGKVYLRAKTAEIPGAAEFLRFFAGAADKIHGEVLKMS 60
+ K+ DLI + +++A + + GK A+ E+ AA F+ +FA A +++G+ +
Sbjct: 98 LRKWFDLIIANADDIALIMTSEQGKPLAEAR-GEVLYAASFIEWFAEEAKRVYGDTIPAP 156
Query: 61 S-ELQGYTLREPVGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLTALYYAH 119
+ +R+PVGV I PWNFP M K +PALAAGCTMIV+PA+ TPLTAL
Sbjct: 157 QNGQRLTVIRQPVGVTAAITPWNFPAAMITRKAAPALAAGCTMIVRPADLTPLTALALGV 216
Query: 120 LAKLAGIPDGVLNVVPGFGPTAGAAICSHMDIDYVCFTGSTDVGRLVMQAAAASNLKQVS 179
LA+ AGIP GVL +V G GA + S+ + + FTGST+VGRL+M A A +K++S
Sbjct: 217 LAEKAGIPAGVLQIVTGKAREIGAELTSNDTVRKLSFTGSTEVGRLLM-AQCAPTIKRIS 275
Query: 180 LELGGKSPLLIFDDADLDTAADVALLGNLYNKGEICVASSRVFVQEGIYDKFEKKLLEKA 239
LELGG +P ++FDDADLD A D A++ N G+ CV ++R++VQ G+YDKF +KL K
Sbjct: 276 LELGGNAPFIVFDDADLDAAVDGAMVSKYRNAGQTCVCANRIYVQRGVYDKFAEKLAAKV 335
Query: 240 KAWLVGDPFDPTVRQGPQISERHFDRILSYIEHGKREGATLLTGGKPIGDKGYYIEPTIF 299
K VG+ +P V GP I E+ ++ ++IE +GA L+TGGK +G G + EP I
Sbjct: 336 KELKVGNGTEPGVVIGPMIEEKAITKVKAHIEDAVSKGAKLITGGKELG--GLFFEPGIL 393
Query: 300 TNVKEDMIIAKEEIFGPVMALMKFKTVEEAIKSANNTQYGLAAGIVTKDLNVANTVSRSI 359
T V DM++AKEE FGP+ L F T EE I AN+T +GLAA T++ + A VS ++
Sbjct: 394 TGVTSDMLVAKEETFGPLAPLFAFDTEEEVIAQANDTIFGLAAYFYTENFSRAIRVSEAL 453
Query: 360 RAGIIWINCYFGFSMDCPYGGYKMSGFGRE---YGLESLYKYLQIKSV 404
G++ N + P+GG K SG GRE YG+E YL+ K +
Sbjct: 454 EYGMVGHNTGLISNEVAPFGGVKQSGLGREGSKYGIEE---YLETKYI 498
|
| >3rh9_A Succinate-semialdehyde dehydrogenase (NAD(P)(+)); structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.63A {Marinobacter aquaeolei} Length = 506 | Back alignment and structure |
|---|
Score = 435 bits (1120), Expect = e-150
Identities = 139/409 (33%), Positives = 228/409 (55%), Gaps = 10/409 (2%)
Query: 1 MWKFADLIEEHVEELAALDALDAGKVYLRAKTAEIPGAAEFLRFFAGAADKIHGEVLKMS 60
+ D ++E+ EE+ + ++ GK + A+ E+ AA F + A + +
Sbjct: 77 LEDIRDGLKENREEIGRILCMEHGKPWKEAQ-GEVDYAAGFFDYCAKHISALDSHTIPEK 135
Query: 61 S-ELQGYTLREPVGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLTALYYAH 119
+ PVGV G I+PWNFP M K+S ALAAGC ++KPA +TPLT + +
Sbjct: 136 PKDCTWTVHYRPVGVTGLIVPWNFPIGMIAKKLSAALAAGCPSVIKPASETPLTMIAFFS 195
Query: 120 LAKLAGIPDGVLNVVPGFGPTAGAAICSHMDIDYVCFTGSTDVGRLVMQAAAASNLKQVS 179
+ +PDG++N+V G G +C H D+ + FTGST+VGR ++ A +K+++
Sbjct: 196 VMDKLDLPDGMVNLVMGKASVIGKVLCEHKDVPMLSFTGSTEVGRKLI-VDTAEQVKKLA 254
Query: 180 LELGGKSPLLIFDDADLDTAADVALLGNLYNKGEICVASSRVFVQEGIYDKFEKKLLEKA 239
LELGG +P ++FDDADL+ AAD + G+ CV ++R+FV E + D F +KL E+
Sbjct: 255 LELGGNAPFIVFDDADLEAAADNLIANKFRGGGQTCVCANRIFVHEKVADAFGQKLAERV 314
Query: 240 KAWLVGDPFDPTVRQGPQISERHFDRILSYIEHGKREGATLLTGGKPIGD-KGYYIEPTI 298
VGD + + GP I+++ FD++ +++ +GA+L+ G +P G + PT+
Sbjct: 315 NKMTVGDGMNDGIDIGPLINKQGFDKVKRHLQDALDKGASLVAGKQPAELGDGLFFPPTV 374
Query: 299 FTNVKEDMIIAKEEIFGPVMALMKFKTVEEAIKSANNTQYGLAAGIVTKDLNVANTVSRS 358
V +M +EE FGP++ + F+T EE I + N+T++GLA+ + T D A V+
Sbjct: 375 VQGVDREMCCYQEETFGPLVPMALFRTEEEVIDAGNDTEFGLASYVFTADAERAQRVAAG 434
Query: 359 IRAGIIWINCYFGFSMDCPYGGYKMSGFGRE---YGLESLYKYLQIKSV 404
+R G + N G + + P+GG K SG GRE GL ++++ ++V
Sbjct: 435 LRFGHVGWNTGTGPTPEAPFGGMKASGIGREGGLEGLF---EFVEAQTV 480
|
| >2w8n_A Succinate-semialdehyde dehydrogenase, mitochondrial; mitochondrion, oxidoreductase, transit peptide, disease mutation, SSA, NAD, ssadh; 2.00A {Homo sapiens} PDB: 2w8o_A 2w8p_A 2w8q_A 2w8r_A* Length = 487 | Back alignment and structure |
|---|
Score = 432 bits (1113), Expect = e-149
Identities = 158/412 (38%), Positives = 243/412 (58%), Gaps = 13/412 (3%)
Query: 1 MWKFADLIEEHVEELAALDALDAGKVYLRAKTAEIPGAAEFLRFFAGAADKIHGEVL-KM 59
+ K+ +L+ ++ ++LA + ++GK A EI +A FL +F+ A +++G+++
Sbjct: 76 LRKWYNLMIQNKDDLARIITAESGKPLKEAH-GEILYSAFFLEWFSEEARRVYGDIIHTP 134
Query: 60 SSELQGYTLREPVGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLTALYYAH 119
+ + + L++P+GV I PWNFP+ M KV ALAAGCT++VKPAE TP +AL A
Sbjct: 135 AKDRRALVLKQPIGVAAVITPWNFPSAMITRKVGAALAAGCTVVVKPAEDTPFSALALAE 194
Query: 120 LAKLAGIPDGVLNVVPGFGPTA---GAAICSHMDIDYVCFTGSTDVGRLVMQAAAASNLK 176
LA AGIP GV NV+P A G AIC+ + + FTGST G++++ AA+++K
Sbjct: 195 LASQAGIPSGVYNVIPCSRKNAKEVGEAICTDPLVSKISFTGSTTTGKILL-HHAANSVK 253
Query: 177 QVSLELGGKSPLLIFDDADLDTAADVALLGNLYNKGEICVASSRVFVQEGIYDKFEKKLL 236
+VS+ELGG +P ++FD A++D A A+ N G+ CV S++ VQ GI+D F K
Sbjct: 254 RVSMELGGLAPFIVFDSANVDQAVAGAMASKFRNTGQTCVCSNQFLVQRGIHDAFVKAFA 313
Query: 237 EKAKAWL-VGDPFDPTVRQGPQISERHFDRILSYIEHGKREGATLLTGGKPIGDKGYYIE 295
E K L VG+ F+ QGP I+E+ +++ + +GAT++TGGK + E
Sbjct: 314 EAMKKNLRVGNGFEEGTTQGPLINEKAVEKVEKQVNDAVSKGATVVTGGKRHQLGKNFFE 373
Query: 296 PTIFTNVKEDMIIAKEEIFGPVMALMKFKTVEEAIKSANNTQYGLAAGIVTKDLNVANTV 355
PT+ NV +DM+ EE FGP+ ++KF T EEAI AN GLA ++D V
Sbjct: 374 PTLLCNVTQDMLCTHEETFGPLAPVIKFDTEEEAIAIANAADVGLAGYFYSQDPAQIWRV 433
Query: 356 SRSIRAGIIWINCYFGFSMDCPYGGYKMSGFGRE---YGLESLYKYLQIKSV 404
+ + G++ +N S++CP+GG K SG GRE YG++ YL++K V
Sbjct: 434 AEQLEVGMVGVNEGLISSVECPFGGVKQSGLGREGSKYGIDE---YLELKYV 482
|
| >3ros_A NAD-dependent aldehyde dehydrogenase; nysgrc, PSI-biology, structural genomics, NEW YORK structura genomics research consortium; 1.88A {Lactobacillus acidophilus} Length = 484 | Back alignment and structure |
|---|
Score = 420 bits (1081), Expect = e-145
Identities = 116/410 (28%), Positives = 191/410 (46%), Gaps = 3/410 (0%)
Query: 3 KFADLIEEHVEELAALDALDAGKVYLRAKTAEIPGAAEFLRFFAGAADKIHGEVLKMSSE 62
A+ ++EH +ELA + L+ GK+ +K E+ ++A ++ S
Sbjct: 56 DIANALKEHEDELAKMMTLEMGKLLSESK-EEVELCVSICNYYADHGPEMLKPTKLNSDL 114
Query: 63 LQGYTLREPVGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLTALYYAHLAK 122
Y L++ GV+ PWNFP +P G +++K A P +A A + K
Sbjct: 115 GNAYYLKQSTGVIMACEPWNFPLYQVIRVFAPNFIVGNPILLKHAHNVPGSAALTAKIIK 174
Query: 123 LAGIPDGVLNVVPGFGPTAGAAICSHMDIDYVCFTGSTDVGRLVMQAAAASNLKQVSLEL 182
AG P+G L + A I + I V TGS G V AA NLK+ ++EL
Sbjct: 175 RAGAPEGSLINLYP-SYDQLADIIADPRIQGVALTGSERGGSAVA-EAAGKNLKKSTMEL 232
Query: 183 GGKSPLLIFDDADLDTAADVALLGNLYNKGEICVASSRVFVQEGIYDKFEKKLLEKAKAW 242
GG ++ DDAD +V YN G++C +S R+ V++ YD+ +L
Sbjct: 233 GGNDAFIVLDDADPQVLRNVLNDARTYNDGQVCTSSKRIIVEKSRYDEVLHELKNVFSNL 292
Query: 243 LVGDPFDPTVRQGPQISERHFDRILSYIEHGKREGATLLTGGKPIGDKGYYIEPTIFTNV 302
GDP + P SE+ +++ + ++ GA + I KG + PTI T++
Sbjct: 293 KAGDPLEADTTLPPMNSEKAKEKLEAQVKEAIDAGAKVFYQYPEIDSKGAFFRPTILTDI 352
Query: 303 KEDMIIAKEEIFGPVMALMKFKTVEEAIKSANNTQYGLAAGIVTKDLNVANTVSRSIRAG 362
+D + +E+FGP+ + + AI+ AN++ YGL + ++ D++ A VS I G
Sbjct: 353 AKDNPVFDKEVFGPIAEVFVVEDDNAAIQLANDSSYGLGSSVIGSDIDRAKKVSAQIETG 412
Query: 363 IIWINCYFGFSMDCPYGGYKMSGFGREYGLESLYKYLQIKSVVTPIYNSP 412
+ IN + S + P+GG K SG+GRE L ++ V+ N+
Sbjct: 413 MTVINGRWITSGELPFGGIKKSGYGRELSGLGLMAFVNEHLVIDVTKNNQ 462
|
| >3etf_A Putative succinate-semialdehyde dehydrogenase; center for ST genomics of infectious diseases, oxidoreductase, csgid; 1.85A {Salmonella typhimurium} PDB: 3efv_A Length = 462 | Back alignment and structure |
|---|
Score = 418 bits (1077), Expect = e-144
Identities = 122/405 (30%), Positives = 189/405 (46%), Gaps = 3/405 (0%)
Query: 1 MWKFADLIEEHVEELAALDALDAGKVYLRAKTAEIPGAAEFLRFFAGAADKIHGEVLKMS 60
+ + H EE+A + GK +A+ AE+ +A ++A + +
Sbjct: 57 LRDIGQALRAHAEEMAQCITREMGKPIKQAR-AEVTKSAALCDWYAEHGPAMLNPEPTLV 115
Query: 61 SELQGYTLREPVGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLTALYYAHL 120
Q P+GV+ I+PWNFP P L AG + ++K A A A +
Sbjct: 116 ENQQAVIEYRPLGVILAIMPWNFPLWQVLRGAVPILLAGNSYLLKHAPNVTGCAQMIARI 175
Query: 121 AKLAGIPDGVLNVVPGFGPTAGAAICSHMDIDYVCFTGSTDVGRLVMQAAAASNLKQVSL 180
AG P GV V + + + I V TGS G + A A + LK+ L
Sbjct: 176 LAEAGTPAGVYGWVNA-NNEGVSQMINDPRIAAVTVTGSVRAGAAIG-AQAGAALKKCVL 233
Query: 181 ELGGKSPLLIFDDADLDTAADVALLGNLYNKGEICVASSRVFVQEGIYDKFEKKLLEKAK 240
ELGG P ++ +DADL+ A A+ G N G++C A+ R V+EGI F + + A
Sbjct: 234 ELGGSDPFIVLNDADLELAVKAAVAGRYQNTGQVCAAAKRFIVEEGIAQAFTDRFVAAAA 293
Query: 241 AWLVGDPFDPTVRQGPQISERHFDRILSYIEHGKREGATLLTGGKPIGDKGYYIEPTIFT 300
A +GDP GP D + ++ EGA LL GG+ I +G Y T+
Sbjct: 294 ALKMGDPLVEENDLGPMARFDLRDELHQQVQASVAEGARLLLGGEKIAGEGNYYAATVLA 353
Query: 301 NVKEDMIIAKEEIFGPVMALMKFKTVEEAIKSANNTQYGLAAGIVTKDLNVANTVSRSIR 360
+V DM ++E+FGPV A+ K A+ AN++++GL+A I T D +A ++ +
Sbjct: 354 DVTPDMTAFRQELFGPVAAITVAKDAAHALALANDSEFGLSATIFTADDTLAAEMAARLE 413
Query: 361 AGIIWINCYFGFSMDCPYGGYKMSGFGREYGLESLYKYLQIKSVV 405
G ++IN Y +GG K SGFGRE L+++ +++V
Sbjct: 414 CGGVFINGYSASDARVAFGGVKKSGFGRELSHFGLHEFCNVQTVW 458
|
| >1ez0_A ALDH, aldehyde dehydrogenase; nucleotide binding domain, NADP+, oxidoreductase; HET: NAP; 2.10A {Vibrio harveyi} SCOP: c.82.1.1 PDB: 1eyy_A* Length = 510 | Back alignment and structure |
|---|
Score = 380 bits (979), Expect = e-129
Identities = 84/437 (19%), Positives = 143/437 (32%), Gaps = 48/437 (10%)
Query: 1 MWKFADLIEEHVEELAALDALDAGKVYLRAKTAEIPGAAEFLRFFAGAADKIHGEVLKMS 60
+ A +E +++ A L+ +R EI A LR FA + +
Sbjct: 58 LRTIASELEARSDDIIARAHLETALPEVRLT-GEIARTANQLRLFADVVNSGSYHQAILD 116
Query: 61 SELQG---------YTLREPVGVVGHIIPWNFP--TTMFFMKVSPALAAGCTMIVKPAEQ 109
+ + +G V NFP + + ALAAGC +IVK
Sbjct: 117 TPNPTRAPLPKPDIRRQQIALGPVAVFGASNFPLAFSAAGGDTASALAAGCPVIVKGHTA 176
Query: 110 TPLTALYYAHLAKLA----GIPDGVLNVVPGFGPTAGAAICSHMDIDYVCFTGSTDVGRL 165
P T+ A + A +P + ++ G G A+ SH +I V FTGS GR
Sbjct: 177 HPGTSQIVAECIEQALKQEQLPQAIFTLLQGNQRALGQALVSHPEIKAVGFTGSVGGGRA 236
Query: 166 VMQAAAAS-NLKQVSLELGGKSPLLIFDDADLDTAADVALL--GNLYNKGEICVASSRVF 222
+ A ELG +P IF A A G+ C VF
Sbjct: 237 LFNLAHERPEPIPFYGELGAINPTFIFPSAMRAKADLADQFVASMTMGCGQFCTKPGVVF 296
Query: 223 VQEG-IYDKFEKKLLEKAKAWLVGDPFDPTVRQGPQISERHFDRILSYIEHGKREGATLL 281
F + + P+ P I + + + + G +G +
Sbjct: 297 ALNTPETQAFIETAQS------LIRQQSPSTLLTPGIRDSYQSQ---VVSRGSDDGIDVT 347
Query: 282 TGGKPIGDKGYYIEPTIF---TNVKEDMIIAKEEIFGPVMALMKFKTVEEAIKSANNTQY 338
+ + +F + +EEIFGP ++ + V + + +
Sbjct: 348 FS----QAESPCVASALFVTSSENWRKHPAWEEEIFGPQSLIVVCENVADMLSLSEMLAG 403
Query: 339 GLAAGIVT--KDLNVANTVSRSI--RAGIIWINCYFGFSMDC-------PYGGYKMSGFG 387
L A I +D + + + AG + N + PY S
Sbjct: 404 SLTATIHATEEDYPQVSQLIPRLEEIAGRLVFNGWPTGVEVGYAMVHGGPYPASTHSA-S 462
Query: 388 REYGLESLYKYLQIKSV 404
G E+++++L+ +
Sbjct: 463 TSVGAEAIHRWLRPVAY 479
|
| >3my7_A Alcohol dehydrogenase/acetaldehyde dehydrogenase; ACDH, PSI, MCSG, structural genomics, midwest center for STR genomics; 2.30A {Vibrio parahaemolyticus} Length = 452 | Back alignment and structure |
|---|
Score = 343 bits (882), Expect = e-115
Identities = 83/437 (18%), Positives = 151/437 (34%), Gaps = 47/437 (10%)
Query: 1 MWKFADLIEEHVEELAALDALDAGKVYLRAKTAEIPGAAEFLRFFAGAADKIHGEVLKMS 60
+ + LA ++G + K + A+EF+ + ++ G +L+
Sbjct: 35 FRAASLAANQARIPLAQQAVEESGMGIVEDKVIKNHFASEFI-YNKYKDEQTCG-ILEED 92
Query: 61 SELQGYTLREPVGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLTALYYAHL 120
L T+ EPVG++ I+P PT+ K +L +I P + + A L
Sbjct: 93 DNLGTMTIAEPVGIICGIVPTTNPTSTAIFKSLISLKTRNGIIFSPHPRAKNSTNDAAKL 152
Query: 121 ----AKLAGIPDGVLNVVPGFGPTAGAAICSHMDIDYVCFTGSTDVGRLVMQAAAASNLK 176
A AG P ++ + A+ H DI + TG + + AA S+ K
Sbjct: 153 VLDAAVAAGAPKDIIGWIDQPSVELSNALMKHDDIALILATGGPGMVK-----AAYSSGK 207
Query: 177 QVSLELGGKSPLLIFDDADLDTAADVALLGNLYNKGEICVASSRVFVQEGIYDKFEKKLL 236
G P++I + AD+ A L+ ++ G +C + V V + +YD+ +++
Sbjct: 208 PAIGVGAGNVPVVIDETADIKRAVASVLMSKTFDNGVVCASEQAVIVVDEVYDEVKERFA 267
Query: 237 EKAKAWLVGDPFDPTVRQGPQISERHFDRILSYIEHGKREGATLLTGGKPIGDKGYYIEP 296
L D VR+ I +I+ E A G + +
Sbjct: 268 SHKAHVLSKTDADK-VRKVLLIDGALNAKIVGQPATAIAEMA-----GVKVPADTKVLIG 321
Query: 297 TIFTNVKEDMIIAKEEIFGPVMALMKFKTVEEAIKSA----NNTQYGLAAGIVTKDL--- 349
V D A E+ P + + + E+A+ A G +G+ T
Sbjct: 322 EGLGKVSYDDAFAHEK-LSPTLGMFRADNFEDAVAQAVTMVEIGGIGHTSGLYTNQDVNA 380
Query: 350 NVANTVSRSIRAGIIWINCY---------------FGFSMDCP-YGGYKMSGFGREYGLE 393
+ ++ I IN ++ C +GG + G +
Sbjct: 381 DRIRYFGDKMKTARILINIPTTHGGIGDLYNFNVAPSLTLGCGSWGG---NSISENVGPK 437
Query: 394 SLYKYLQIKSVVTPIYN 410
L + K+V N
Sbjct: 438 HL---INKKTVAKRAEN 451
|
| >3haz_A Proline dehydrogenase; proline utilization A, PUTA, flavoenzyme, 1-pyrroline-5-carboxylate dehydrogenase, oxidoreductase; HET: FAD NAD; 2.10A {Bradyrhizobium japonicum usda 110} Length = 1001 | Back alignment and structure |
|---|
Score = 353 bits (908), Expect = e-113
Identities = 120/419 (28%), Positives = 196/419 (46%), Gaps = 28/419 (6%)
Query: 1 MWKFADLIEEHVEELAALDALDAGKVYLRAKTAEIPGAAEFLRFFAGAADKIHGEVLKMS 60
+ + A L+E AL + GK A +E+ AA+F R++A K+ G M
Sbjct: 578 LEQAAHLLESRSAHFIALLQREGGKTLDDAL-SELREAADFCRYYAAQGRKLFGSETAMP 636
Query: 61 --SELQGYTLREPVGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLTALYYA 118
+ GV I PWNFP +F +V+ AL AG +++ KPAEQTP A
Sbjct: 637 GPTGESNALTMRGRGVFVAISPWNFPLAIFLGQVTAALMAGNSVVAKPAEQTPRIAREAV 696
Query: 119 HLAKLAGIPDGVLNVVPGFGPTAGAAICSHMDIDYVCFTGSTDVGRLVMQAAAASN--LK 176
L AGIP L +V G G GAA+ +H DI V FTGST+V R + +A AA + +
Sbjct: 697 ALLHEAGIPKSALYLVTGDGR-IGAALTAHPDIAGVVFTGSTEVARSINRALAAKDGPIV 755
Query: 177 QVSLELGGKSPLLIFDDADLDTAADVALLGNLYNKGEICVASSRVFVQEGIYDKFEKKLL 236
+ E GG + ++ A + AD + + G+ C A +FVQE + D+ + +
Sbjct: 756 PLIAETGGINAMIADATALPEQVADDVVTSAFRSAGQRCSALRLLFVQEDVADRMIEMVA 815
Query: 237 EKAKAWLVGDPFDPTVRQGPQISERHFDRILSYIEHGKREGATLLTGGKPIGDKGYYIEP 296
A+ +GDP D GP I R+ ++I K E L G +G ++ P
Sbjct: 816 GAARELKIGDPSDVATHVGPVIDVEAKQRLDAHIARMKTEA-RLHFAGPA--PEGCFVAP 872
Query: 297 TIFTNVKEDMIIAKEEIFGPVMALMKFK--TVEEAIKSANNTQYGLAAGIVTKDLNVANT 354
IF + EE+FGP++ +++++ +E +++ T YGL G+ ++ +
Sbjct: 873 HIFELTEAG--QLTEEVFGPILHVVRYRPENLERVLRAIERTGYGLTLGVHSRIDDSIEA 930
Query: 355 VSRSIRAGIIWINCYFGFSMDC--------PYGGYKMSGFG-REYGLESLYKYLQIKSV 404
+ ++ G I++N + P+GG +SG G + G L ++ ++V
Sbjct: 931 IIDRVQVGNIYVN------RNMIGAVVGVQPFGGNGLSGTGPKAGGPHYLARFATEQTV 983
|
| >3v4c_A Aldehyde dehydrogenase (NADP+); structural genomics, PSI-biology, nysgrc, NEW YORK structura genomics research consortium; HET: PE4; 1.91A {Sinorhizobium meliloti} Length = 528 | Back alignment and structure |
|---|
Score = 326 bits (837), Expect = e-107
Identities = 88/433 (20%), Positives = 138/433 (31%), Gaps = 46/433 (10%)
Query: 1 MWKFADLIEEHVEELAALDALDAGKVYLRAKTAEIPGAAEFLRFFAGAA------DKIHG 54
+ AD IE E + + + + G R E LR FA D+
Sbjct: 91 LRAIADEIEARAEAITEIGSQETGLPEARLN-GERGRTTGQLRLFADHIEKGDYLDRRVD 149
Query: 55 EVLKMSSELQG---YTLREPVGVVGHIIPWNFPTTMFFM--KVSPALAAGCTMIVKPAEQ 109
+ ++ PVG V NFP + ALAAGC ++VK
Sbjct: 150 AAMPERQPAPRQEIRLVQRPVGPVAVFGASNFPLAFSTAGGDTAAALAAGCPVVVKGHSA 209
Query: 110 TPLTALYYAHLA----KLAGIPDGVLNVVPGFGPTAGAAICSHMDIDYVCFTGSTDVGRL 165
P T A + G+ GV +++ G G A+ H I V FTGS GR
Sbjct: 210 HPGTGEIVAEAVDAAIRKTGVHPGVFSLIQGGSRDVGHALVQHPHIKAVGFTGSLAGGRA 269
Query: 166 VMQAAAAS-NLKQVSLELGGKSPLLIFDDADLDTAADVA---LLGNLYNKGEICVASSRV 221
+ AA ELG +P+ + +A A + G+ C
Sbjct: 270 LFDLCAARPEPIPFFGELGSVNPMFLLPEALKARAETLGQGWAGSLTMGAGQFCTNPGIA 329
Query: 222 FVQEGI-YDKFEKKLLEKAKAWLVGDPFDPTVRQGPQISERHFDRILSYIEHGKREGATL 280
V EG D+F +E + + + + F R
Sbjct: 330 VVIEGADADRFTTAAVEALAKVAPQTMLTDGIAKAYRDGQARF---------ATRNAVKP 380
Query: 281 LTGGKPIGDKGYYIEPTIFTNVKEDMI---IAKEEIFGPVMALMKFKTVEEAIKSANNTQ 337
L G P +F + EE+FGP+ +++ + E + A Q
Sbjct: 381 LLAT---ESSGRDASPNLFETTGAQFLADHALGEEVFGPLGLVVRVGSPAEMEELARGFQ 437
Query: 338 YGLAAGIVTKDLNVAN----TVSRSIRAGIIWINCYFGFSMDCPY----GGYKMSGFGRE 389
L A I ++ +AG + +N + G Y S
Sbjct: 438 GQLTATIHMDAGDLETARRLRPVLERKAGRVLVNGFPTGVEVVDSMVHGGPYPASTNFGA 497
Query: 390 Y--GLESLYKYLQ 400
G S+ ++L+
Sbjct: 498 TSVGTMSIRRFLR 510
|
| >1t90_A MMSDH, probable methylmalonate-semialdehyde dehydrogenase; oxidoreductase, NAD; HET: NAD; 2.50A {Bacillus subtilis} Length = 486 | Back alignment and structure |
|---|
Score = 320 bits (822), Expect = e-106
Identities = 147/418 (35%), Positives = 221/418 (52%), Gaps = 22/418 (5%)
Query: 1 MWKFADLIEEHVEELAALDALDAGKVYLRAKTAEIPGAAEFLRFFAGAADKIHGEVLK-M 59
++ F L+ +H EELA L ++ GK A E+ E + F AGA + G+ L +
Sbjct: 71 LFNFQQLLSQHKEELAHLITIENGKNTKEAL-GEVGRGIENVEFAAGAPSLMMGDSLASI 129
Query: 60 SSELQGYTLREPVGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLTALYYAH 119
+++++ R P+GVVG I P+NFP + A+A G T I+KP+E+TPL
Sbjct: 130 ATDVEAANYRYPIGVVGGIAPFNFPMMVPCWMFPMAIALGNTFILKPSERTPLLTEKLVE 189
Query: 120 LAKLAGIPDGVLNVVPGFGPTAGAAICSHMDIDYVCFTGSTDVGRLVMQAAAASNLKQVS 179
L + AG+P GV NVV G I H +I + F GS VG V + + NLK+V
Sbjct: 190 LFEKAGLPKGVFNVVYG-AHDVVNGILEHPEIKAISFVGSKPVGEYVYKKGSE-NLKRVQ 247
Query: 180 LELGGKSPLLIFDDADLDTAADVALLGNLY-NKGEICVASSRVFVQEGIYDKFEKKLLEK 238
G K+ ++ +DA+L+ ++G + + GE C+A + V V+EGI D+F KL EK
Sbjct: 248 SLTGAKNHTIVLNDANLEDTVT-NIVGAAFGSAGERCMACAVVTVEEGIADEFMAKLQEK 306
Query: 239 AKAWLVGDPFDPTVRQGPQISERHFDRILSYIEHGKREGATLLTGGKPIG-DKGYYIEPT 297
+G+ D V GP I E + R LSYIE G EGA L+ G+ D GY++ PT
Sbjct: 307 VADIKIGNGLDDGVFLGPVIREDNKKRTLSYIEKGLEEGARLVCDGRENVSDDGYFVGPT 366
Query: 298 IFTNVKEDMIIAKEEIFGPVMALMKFKTVEEAIKSANNTQYGLAAGIVTKDLNVANTVSR 357
IF NV +M I K+EIF PV+++++ K ++EAI+ AN +++ A + T + N
Sbjct: 367 IFDNVTTEMTIWKDEIFAPVLSVIRVKNLKEAIEIANKSEFANGACLFTSNSNAIRYFRE 426
Query: 358 SIRAGIIWIN-------CYFGFSMDCPYGGYKMSGFG--REYGLESLYKYLQIKSVVT 406
+I AG++ IN +F F G+K S FG G +S+ Y + K V
Sbjct: 427 NIDAGMLGINLGVPAPMAFFPF------SGWKSSFFGTLHANGKDSVDFYTRKKVVTA 478
|
| >4e4g_A Methylmalonate-semialdehyde dehydrogenase; structural genomics, protein structure INI nysgrc, PSI-biology; 2.90A {Sinorhizobium meliloti} Length = 521 | Back alignment and structure |
|---|
Score = 314 bits (806), Expect = e-103
Identities = 136/422 (32%), Positives = 212/422 (50%), Gaps = 26/422 (6%)
Query: 1 MWKFADLIEEHVEELAALDALDAGKVYLRAKTAEIPGAAEFLRFFAGAADKIHGEVLK-M 59
KF L+ +++ ELA + + + GK AK +I E F G E +
Sbjct: 92 FMKFVQLLNDNMNELAEMLSREHGKTIDDAK-GDIVRGLEVCEFVIGIPHLQKSEFTEGA 150
Query: 60 SSELQGYTLREPVGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLTALYYAH 119
+ Y++R+PVG+ I P+NFP + +PA+A G I+KP+E+ P + A
Sbjct: 151 GPGIDMYSIRQPVGIGAGITPFNFPGMIPMWMFAPAIACGNAFILKPSERDPSVPIRLAE 210
Query: 120 LAKLAGIPDGVLNVVPGFGPTAGAAICSHMDIDYVCFTGSTDVGRLVMQAAAASNLKQVS 179
L AG+P G+LNVV G A AI +H DI V F GST + R V AA N K+
Sbjct: 211 LMIEAGLPAGILNVVNG-DKGAVDAILTHPDIAAVSFVGSTPIARYVYGTAAM-NGKRAQ 268
Query: 180 LELGGKSPLLIFDDADLDTAADVALLGNLY-NKGEICVA-SSRVFVQEGIYDKFEKKLLE 237
G K+ ++I DADLD AA+ AL+G Y + GE C+A S V V E ++ KL+
Sbjct: 269 CFGGAKNHMIIMPDADLDQAAN-ALIGAGYGSAGERCMAISVAVPVGEETANRLIDKLVP 327
Query: 238 KAKAWLVGDPFDPTVRQGPQISERHFDRILSYIEHGKREGATLLTGGK----PIGDKGYY 293
++ +G D GP +++ RI S I+ G +GA L+ G+ + G++
Sbjct: 328 MVESLRIGPYTDEKADMGPVVTKEAEQRIRSLIDSGIEQGAKLVVDGRDFKLQGYENGHF 387
Query: 294 IEPTIFTNVKEDMIIAKEEIFGPVMALMKFKTVEEAIKSANNTQYGLAAGIVTKDLNVAN 353
I +F +V DM I K EIFGPV+++++ + EEA+ +YG I T+D + A
Sbjct: 388 IGGCLFDDVTPDMDIYKTEIFGPVLSVVRARNYEEALSLPMKHEYGNGVAIYTRDGDAAR 447
Query: 354 TVSRSIRAGIIWIN-------CYFGFSMDCPYGGYKMSGFG--REYGLESLYKYLQIKSV 404
+ I G++ +N Y F GG+K S FG ++G +S+ + + K++
Sbjct: 448 DFASRINIGMVGVNVPIPVPLAYHSF------GGWKSSSFGDLNQHGTDSIKFWTRTKTI 501
Query: 405 VT 406
+
Sbjct: 502 TS 503
|
| >3k9d_A LMO1179 protein, aldehyde dehydrogenase; structural genomics, PSI-2, protein initiative; 2.00A {Listeria monocytogenes} Length = 464 | Back alignment and structure |
|---|
Score = 293 bits (751), Expect = 2e-95
Identities = 77/441 (17%), Positives = 146/441 (33%), Gaps = 56/441 (12%)
Query: 3 KFADLIEEHVEELAALDALDAGKVYLRAKTAEIPGAAEFLRFFAGAADKIHGEVLKMSSE 62
AD E+LA + + G + K + A++ + + K G +LK +E
Sbjct: 42 AIADAGYGAREKLAKMAHEETGFGIWQDKVIKNVFASKHVYNYI-KDMKTIG-MLKEDNE 99
Query: 63 LQGYTLREPVGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLTALYYAHL-- 120
+ + P+GVV +IP PT+ K ++ AG +++ P L +
Sbjct: 100 KKVMEVAVPLGVVAGLIPSTNPTSTVIYKTLISIKAGNSIVFSPHPNALKAILETVRIIS 159
Query: 121 --AKLAGIPDGVLNVVPGFGPTAGAAICSHMDIDYVCFTGSTDVGRLVMQAAAASNLKQV 178
A+ AG P G ++ + + H D + TG + + + AA S+
Sbjct: 160 EAAEKAGCPKGAISCMTVPTIQGTDQLMKHKDTAVILATGGSAMVK-----AAYSSGTPA 214
Query: 179 SLELGGKSPLLIFDDADLDTAADVALLGNLYNKGEICVASSRVFVQEGIYDKFEKKLLEK 238
G P I A++ A L ++ G IC + V V+ + + ++
Sbjct: 215 IGVGPGNGPAFIERSANIPRAVKHILDSKTFDNGTICASEQSVVVERVNKEAVIAEFRKQ 274
Query: 239 AKAWLVGD--------PFDPTVRQGPQISERHFDRILSYIEHGKREGATLLTGGKPIGDK 290
+L P P I + I + A +L +
Sbjct: 275 GAHFLSDAEAVQLGKFILRPNGSMNPAIVGKSVQHIANLAGLTVPADARVLIAEE----- 329
Query: 291 GYYIEPTIFTNVKEDMIIAKEEIFGPVMALMKFKTVEEAIKSANNTQY----GLAAGIVT 346
T V + + E P++A +T +EA + + + Y G I +
Sbjct: 330 ---------TKVGAKIPYS-REKLAPILAFYTAETWQEACELSMDILYHEGAGHTLIIHS 379
Query: 347 KDLNVANTVSRSIRAGIIWIN-------------CYFGFSMDCPYGGYKMSGFGREYGLE 393
+D + + + +N ++ C G S G E
Sbjct: 380 EDKEIIREFALKKPVSRLLVNTPGALGGIGATTNLVPALTLGC--GAVGGSSSSDNIGPE 437
Query: 394 SLYKYLQIKSVVTPIYNSPWL 414
+L I+ + T + +
Sbjct: 438 NL---FNIRRIATGVLELEDI 455
|
| >4e3x_A Delta-1-pyrroline-5-carboxylate dehydrogenase, mitochondrial; amino acid metabolism, proline inhibition, oxidoreductase; HET: 16P PGE; 1.24A {Mus musculus} PDB: 3v9k_A* 3v9l_A* 3v9j_A* 3v9g_A 3v9h_A 3v9i_A Length = 563 | Back alignment and structure |
|---|
Score = 273 bits (701), Expect = 8e-87
Identities = 105/405 (25%), Positives = 175/405 (43%), Gaps = 29/405 (7%)
Query: 3 KFADLIE-EHVEELAALDALDAGKVYLRAKTAEIPGAAEFLRFFAGAADKIHGEV-LKMS 60
K AD++ E+ A + GK ++A+ +F RF A A ++ GE + +
Sbjct: 130 KAADMLSGPRRAEVLAKTMVGQGKTVIQAEIDAAAELIDFFRFNAKFAVELEGEQPISVP 189
Query: 61 SELQGYTLREPVGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLTALYYAHL 120
R G V I P+NF + G ++ KP++ L + +
Sbjct: 190 PSTNHTVYRGLEGFVAAISPFNFTAIGGNL-AGAPALMGNVVLWKPSDTAMLASYAVYRI 248
Query: 121 AKLAGIPDGVLNVVPGFGPTAGAAICSHMDIDYVCFTGSTDVGRLVMQAAAASNLKQVSL 180
+ AG+P ++ VP GPT G + S + + FTGS + + + A + + +
Sbjct: 249 LREAGLPPNIIQFVPADGPTFGDTVTSSEHLCGINFTGSVPTFKHLWRQVAQNLDRFRTF 308
Query: 181 -----ELGGKSPLLIFDDADLDTAADVALLGNLYNKGEICVASSRVFVQEGIYDKFEKKL 235
E GGK+ + AD+D+ L G+ C A SR++V + ++ + + +L
Sbjct: 309 PRLAGECGGKNFHFVHSSADVDSVVSGTLRSAFEYGGQKCSACSRLYVPKSLWPQIKGRL 368
Query: 236 LEKAKAWLVGDPF-DPTVRQGPQISERHFDRILSYIEHGKREG-ATLLTGGKPIGDKGYY 293
LE+ VGDP D I + F RI ++EH + ++L GG+ GYY
Sbjct: 369 LEEHSRIKVGDPAEDFGTFFSAVIDAKAFARIKKWLEHARSSPSLSILAGGQCNESVGYY 428
Query: 294 IEPTIFTNVKEDMIIAKEEIFGPVMALMKFK--TVEEAIKSANN-TQYGLAAGIVTKDLN 350
+EP I + I KEEIFGPV+ + + E +K ++ T YGL + +D
Sbjct: 429 VEPCIIESKDPQEPIMKEEIFGPVLTVYVYPDDKYRETLKLVDSTTSYGLTGAVFAQDKA 488
Query: 351 VANTVSRSIR--AGIIWINCYFGFSMDC--------PYGGYKMSG 385
+ +R +R AG +IN P+GG + SG
Sbjct: 489 IVQEATRMLRNAAGNFYIND------KSTGSVVGQQPFGGARASG 527
|
| >3sza_A Aldehyde dehydrogenase, dimeric NADP-preferring; ALDH, rossmann fold, oxidoreductase; 1.48A {Homo sapiens} PDB: 3szb_A* 1ad3_A* Length = 469 | Back alignment and structure |
|---|
Score = 237 bits (606), Expect = 8e-74
Identities = 120/412 (29%), Positives = 187/412 (45%), Gaps = 45/412 (10%)
Query: 3 KFADLIEEHVEEL-AALDALDAGKVYLRAKTAEIPGAAEFLRFFAG------AADKIHGE 55
LI+E +EL AL A D K A E+ E + + A + +
Sbjct: 48 ALQRLIQEQEQELVGALAA-DLHKNEWNAYYEEVVYVLEEIEYMIQKLPEWAADEPVEKT 106
Query: 56 VLKMSSELQGYTLREPVGVVGHIIPWNFPTTMFFMKVSP---ALAAGCTMIVKPAEQTPL 112
+ Y EP+GVV I WN+P F + + P A+AAG +++KP+E +
Sbjct: 107 PQTQQD--ELYIHSEPLGVVLVIGTWNYP---FNLTIQPMVGAIAAGNAVVLKPSELSEN 161
Query: 113 TALYYAHLAKLAGIPD----GVLNVVPGFGPTAGAAICSHMDIDYVCFTGSTDVGRLVMQ 168
A + LA + IP + V+ G G + D++ +TGST VG+++M
Sbjct: 162 MA---SLLATI--IPQYLDKDLYPVING-GVPETTELLKE-RFDHILYTGSTGVGKIIMT 214
Query: 169 AAAASNLKQVSLELGGKSPLLIFDDADLDTAADVALLGNLYNKGEICVASSRVFVQEGIY 228
AAA +L V+LELGGKSP + + DLD A G N G+ CVA + I
Sbjct: 215 AAAK-HLTPVTLELGGKSPCYVDKNCDLDVACRRIAWGKFMNSGQTCVAPDYILCDPSIQ 273
Query: 229 DKFEKKLLEKAKAWLVGDPFDPTVRQGPQ----ISERHFDRILSYIEHGKREGATLLTGG 284
++ +KL + K + D ++ IS RHF R++ IE K + GG
Sbjct: 274 NQIVEKLKKSLKEFYGEDA-----KKSRDYGRIISARHFQRVMGLIEGQK-----VAYGG 323
Query: 285 KPIGDKGYYIEPTIFTNVKEDMIIAKEEIFGPVMALMKFKTVEEAIKSANNTQYGLAAGI 344
YI PTI T+V + +EEIFGPV+ ++ +++EEAI+ N + LA +
Sbjct: 324 T-GDAATRYIAPTILTDVDPQSPVMQEEIFGPVLPIVCVRSLEEAIQFINQREKPLALYM 382
Query: 345 VTKDLNVANTVSRSIRAGIIWIN-CYFGFSMDC-PYGGYKMSGFGREYGLES 394
+ + V + +G + N ++ P+GG SG G +G +S
Sbjct: 383 FSSNDKVIKKMIAETSSGGVAANDVIVHITLHSLPFGGVGNSGMGSYHGKKS 434
|
| >3lns_A Benzaldehyde dehydrogenase; oxidoreductase, NADP+, class 3 aldehyde dehyd adduct, covalent catalysis, mandelate racemase pathway; HET: ZBZ NAP; 2.50A {Pseudomonas putida} PDB: 3lv1_A* Length = 457 | Back alignment and structure |
|---|
Score = 213 bits (544), Expect = 8e-65
Identities = 111/407 (27%), Positives = 186/407 (45%), Gaps = 36/407 (8%)
Query: 3 KFADLIEEHVEEL-AALDALDAGKVYLRAKTAEIPGAAEFLRFFAG------AADKIHGE 55
+ + + + E L +AL D GK AEI + F A +
Sbjct: 58 RLKEAVINNKEALYSALAE-DLGKPKDVVDLAEIGAVLHEIDFALAHLDEWVAPVSVPSP 116
Query: 56 VLKMSSELQGYTLREPVGVVGHIIPWNFPTTMFFMKVSP---ALAAGCTMIVKPAEQTPL 112
+ S + Y ++EP GV I P+N+P + ++P A+ G T I+KP+E TP
Sbjct: 117 DIIAPS--ECYVVQEPYGVTYIIGPFNYP---VNLTLTPLIGAIIGGNTCIIKPSETTPE 171
Query: 113 TALYYAHLAKLAG--IPDGVLNVVPGFGPTAGAAICSHMDIDYVCFTGSTDVGRLVMQAA 170
T+ A + K+ + V+ G G + + + D++ FTGS +VG++VMQAA
Sbjct: 172 TS---AVIEKIIAEAFAPEYVAVIQG-GRDENSHL-LSLPFDFIFFTGSPNVGKVVMQAA 226
Query: 171 AASNLKQVSLELGGKSPLLIFDDADLDTAADVALLGNLYNKGEICVASSRVFVQEGIYDK 230
A +L V LELGGK PL++ DADLD + + G N G+ +A ++V + D
Sbjct: 227 AK-HLTPVVLELGGKCPLIVLPDADLDQTVNQLMFGKFINSGQTXIAPDYLYVHYSVKDA 285
Query: 231 FEKKLLEKAKAWLVGDPFDPTVRQGPQISERHFDRILSYIEHGKREGATLLTGGKPIGDK 290
++L+E+ K L + ++ER R++S +E + + G
Sbjct: 286 LLERLVERVKTELPEINSTGKL-----VTERQVQRLVSLLEATQGQVLV----GSQADVS 336
Query: 291 GYYIEPTIFTNVKEDMIIAKEEIFGPVMALMKFKTVEEAIKSANNTQ-YGLAAGIVTKDL 349
+ T+ V+ + + EE+FGP++ +++F +V AI N LA + KD+
Sbjct: 337 KRALSATVVDGVEWNDPLMSEELFGPILPVLEFDSVRTAIDQVNKHHPKPLAVYVFGKDM 396
Query: 350 NVANTVSRSIRAGIIWIN-CYFGFSMDC-PYGGYKMSGFGREYGLES 394
+VA + I++G +N P+GG SG G +G S
Sbjct: 397 DVAKGIINQIQSGDAQVNGVMLHAFSPYLPFGGIGASGMGEYHGHFS 443
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 43.7 bits (102), Expect = 1e-04
Identities = 48/273 (17%), Positives = 80/273 (29%), Gaps = 84/273 (30%)
Query: 148 HMDIDYVCFTGSTDVGR----LVMQAAAASNL--KQVSLELGGKSPLLIFDDADLDTAAD 201
HMD + TG V + A N K V P I ++D
Sbjct: 6 HMDFE----TGEHQYQYKDILSVFEDAFVDNFDCKDVQ-----DMPKSILSKEEID---- 52
Query: 202 VALLGNLYNKGEICVASSRVFV-----QEGIYDKFEKKLLEKAKAWLVGDPFDPTVRQGP 256
++ + + R+F QE + KF +++L +L+ P RQ P
Sbjct: 53 -----HIIMSKDAVSGTLRLFWTLLSKQEEMVQKFVEEVLRINYKFLM-SPIKTEQRQ-P 105
Query: 257 QISERHFDRILSYIEHGKREGATLLTGGKPIGDKGYYIEPTIFTNVKEDMIIAKEE---- 312
+ R YIE R L + K + +++ ++ +
Sbjct: 106 SMMTR------MYIEQRDR-----LYNDNQVFAKYNVSRLQPYLKLRQALLELRPAKNVL 154
Query: 313 IFGPVMALMK-F-KTVEEAIKSANNTQYGLAAGIVTKDLNVANTVSRSIRAGIIWINCYF 370
I G + KT +A V V + I W+N
Sbjct: 155 IDG-----VLGSGKTW-------------VALD-VCLSYKVQCKMDF----KIFWLN--L 189
Query: 371 GFSMDCPYGGYKMSGFGREYGLESLYKYLQIKS 403
+ + P +M L+ L QI
Sbjct: 190 K-NCNSPETVLEM--------LQKL--LYQIDP 211
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 42.9 bits (100), Expect = 2e-04
Identities = 60/487 (12%), Positives = 137/487 (28%), Gaps = 119/487 (24%)
Query: 4 FADLIEEHVEELAALDALDAGKVYLRAKTAEIPGAAEFLRFFAGA--------ADKIHGE 55
+I L L +K E+ +F I E
Sbjct: 51 IDHIIMSKDAVSGTLRLFWT----LLSKQEEM-----VQKFVEEVLRINYKFLMSPIKTE 101
Query: 56 VLKMSSELQGY-TLREPVGVVGHII-PWNFPTTMFFMKVSPALAAGCTMIVKPAE----- 108
+ S + Y R+ + + +N ++K+ AL + ++PA+
Sbjct: 102 QRQPSMMTRMYIEQRDRLYNDNQVFAKYNVSRLQPYLKLRQAL-----LELRPAKNVLID 156
Query: 109 ------QTPLTALYYAHLAKLAGIPDGV--LNVVPGFGPTAGAAI------CSHMDIDYV 154
+T + + + LN+ + + +D ++
Sbjct: 157 GVLGSGKTWVALDVCLSYKVQCKMDFKIFWLNL--KNCNSPETVLEMLQKLLYQIDPNWT 214
Query: 155 CFTGSTDVGRLVMQAAAASNLKQVSLELGGKSPLLIFDDA---------DLD-----TAA 200
+ + +L + + A L+++ ++ LL+ + +L T
Sbjct: 215 SRSDHSSNIKLRIHSIQA-ELRRLLKSKPYENCLLVLLNVQNAKAWNAFNLSCKILLTTR 273
Query: 201 D--VALLGNLYNKGEICVASSRVFVQEGIYDKFEKKLLEKAKAWLVGDPFD--PTVRQG- 255
V + I + + K LL K +L P D V
Sbjct: 274 FKQVTDFLSAATTTHISL----DHHSMTLTPDEVKSLLLK---YLDCRPQDLPREVLTTN 326
Query: 256 PQ----ISER---HFDRILSYIEH--GKREGATL---LTGGKPIGDKGYYIEPTIF---T 300
P+ I+E +H + + L +P + + ++F
Sbjct: 327 PRRLSIIAESIRDGLATW-DNWKHVNCDKLTTIIESSLNVLEPAEYRKMFDRLSVFPPSA 385
Query: 301 NVKED--MIIAKEEIFGPVMALM-KFKTVEEAIKSANNTQYGLAAGIVTKDLNVANTVS- 356
++ +I + I VM ++ K K + + + + + + N +
Sbjct: 386 HIPTILLSLIWFDVIKSDVMVVVNKLHKYSLVEKQPKESTISIPSIYLELKVKLENEYAL 445
Query: 357 -RSIRAGIIWINCY--------FGFSMDCP------YGGYKMSGFG---REYGLESLY-- 396
RSI ++ Y + G+ + R ++
Sbjct: 446 HRSI------VDHYNIPKTFDSDDLIPPYLDQYFYSHIGHHLKNIEHPERMTLFRMVFLD 499
Query: 397 -KYLQIK 402
++L+ K
Sbjct: 500 FRFLEQK 506
|
Structure Templates Detected by HHsearch
Original result of HHsearch against PDB70 database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 414 | |||
| 2wme_A | 490 | BADH, betaine aldehyde dehydrogenase; aldehyde oxi | 100.0 | |
| 3ed6_A | 520 | Betaine aldehyde dehydrogenase; structural genomic | 100.0 | |
| 3ros_A | 484 | NAD-dependent aldehyde dehydrogenase; nysgrc, PSI- | 100.0 | |
| 3rh9_A | 506 | Succinate-semialdehyde dehydrogenase (NAD(P)(+)); | 100.0 | |
| 3u4j_A | 528 | NAD-dependent aldehyde dehydrogenase; PSI-biology, | 100.0 | |
| 3ifg_A | 484 | Succinate-semialdehyde dehydrogenase (NADP+); niai | 100.0 | |
| 3iwj_A | 503 | Putative aminoaldehyde dehydrogenase; rossmann fol | 100.0 | |
| 1bxs_A | 501 | Aldehyde dehydrogenase; retinal, class 1, tetramer | 100.0 | |
| 2o2p_A | 517 | Formyltetrahydrofolate dehydrogenase; aldehyde deh | 100.0 | |
| 3ek1_A | 504 | Aldehyde dehydrogenase; ssgcid, oxidoreductase, st | 100.0 | |
| 1o04_A | 500 | Aldehyde dehydrogenase, mitochondrial precursor; A | 100.0 | |
| 4f3x_A | 498 | Putative aldehyde dehydrogenase; structural genomi | 100.0 | |
| 3b4w_A | 495 | Aldehyde dehydrogenase; RV0223C-NAD complex, struc | 100.0 | |
| 3k2w_A | 497 | Betaine-aldehyde dehydrogenase; structural genomic | 100.0 | |
| 2d4e_A | 515 | 5-carboxymethyl-2-hydroxymuconate semialdehyde deh | 100.0 | |
| 1a4s_A | 503 | ALDH, betaine aldehyde dehydrogenase; oxidoreducta | 100.0 | |
| 3r31_A | 517 | BADH, betaine aldehyde dehydrogenase; structural g | 100.0 | |
| 3jz4_A | 481 | Succinate-semialdehyde dehydrogenase [NADP+]; tetr | 100.0 | |
| 3qan_A | 538 | 1-pyrroline-5-carboxylate dehydrogenase 1; proline | 100.0 | |
| 2ve5_A | 490 | BADH, betaine aldehyde dehydrogenase; aldehyde oxi | 100.0 | |
| 1wnd_A | 495 | Putative betaine aldehyde dehydrogenase; NADH, flu | 100.0 | |
| 2imp_A | 479 | Lactaldehyde dehydrogenase; protein-lactate-NADH t | 100.0 | |
| 3prl_A | 505 | NADP-dependent glyceraldehyde-3-phosphate dehydro; | 100.0 | |
| 3i44_A | 497 | Aldehyde dehydrogenase; oxidoreductase, structural | 100.0 | |
| 3etf_A | 462 | Putative succinate-semialdehyde dehydrogenase; cen | 100.0 | |
| 4e4g_A | 521 | Methylmalonate-semialdehyde dehydrogenase; structu | 100.0 | |
| 3pqa_A | 486 | Lactaldehyde dehydrogenase; structural genomics, p | 100.0 | |
| 2w8n_A | 487 | Succinate-semialdehyde dehydrogenase, mitochondria | 100.0 | |
| 3r64_A | 508 | NAD dependent benzaldehyde dehydrogenase; structur | 100.0 | |
| 1uxt_A | 501 | Glyceraldehyde-3-phosphate dehydrogenase (NADP+); | 100.0 | |
| 4dng_A | 485 | Uncharacterized aldehyde dehydrogenase ALDY; struc | 100.0 | |
| 2j6l_A | 500 | Aldehyde dehydrogenase family 7 member A1; NAD, re | 100.0 | |
| 1uzb_A | 516 | 1-pyrroline-5-carboxylate dehydrogenase; oxidoredu | 100.0 | |
| 1euh_A | 475 | NADP dependent non phosphorylating glyceraldehyde- | 100.0 | |
| 3ty7_A | 478 | Putative aldehyde dehydrogenase SAV2122; structura | 100.0 | |
| 1t90_A | 486 | MMSDH, probable methylmalonate-semialdehyde dehydr | 100.0 | |
| 3sza_A | 469 | Aldehyde dehydrogenase, dimeric NADP-preferring; A | 100.0 | |
| 4h7n_A | 474 | Aldehyde dehydrogenase; structural genomics, PSI-b | 100.0 | |
| 4e3x_A | 563 | Delta-1-pyrroline-5-carboxylate dehydrogenase, mit | 100.0 | |
| 3lns_A | 457 | Benzaldehyde dehydrogenase; oxidoreductase, NADP+, | 100.0 | |
| 3ju8_A | 490 | Succinylglutamic semialdehyde dehydrogenase; alpha | 100.0 | |
| 4f9i_A | 1026 | Proline dehydrogenase/delta-1-pyrroline-5-carboxy | 100.0 | |
| 2y53_A | 534 | Aldehyde dehydrogenase (BOX pathway); oxidoreducta | 100.0 | |
| 3haz_A | 1001 | Proline dehydrogenase; proline utilization A, PUTA | 100.0 | |
| 3v4c_A | 528 | Aldehyde dehydrogenase (NADP+); structural genomic | 100.0 | |
| 1ez0_A | 510 | ALDH, aldehyde dehydrogenase; nucleotide binding d | 100.0 | |
| 3k9d_A | 464 | LMO1179 protein, aldehyde dehydrogenase; structura | 100.0 | |
| 1vlu_A | 468 | Gamma-glutamyl phosphate reductase; YOR323C, struc | 100.0 | |
| 2h5g_A | 463 | Delta 1-pyrroline-5-carboxylate synthetase; dehydr | 100.0 | |
| 4ghk_A | 444 | Gamma-glutamyl phosphate reductase; structural gen | 100.0 | |
| 1o20_A | 427 | Gamma-glutamyl phosphate reductase; TM0293, struct | 100.0 | |
| 3my7_A | 452 | Alcohol dehydrogenase/acetaldehyde dehydrogenase; | 100.0 | |
| 1kae_A | 434 | HDH, histidinol dehydrogenase; L-histidinol dehydr | 97.75 | |
| 4gic_A | 423 | HDH, histidinol dehydrogenase; protein structure i | 97.74 |
| >2wme_A BADH, betaine aldehyde dehydrogenase; aldehyde oxidation, NAD, NADP complex, oxidoreductase; HET: NAP CSO; 2.10A {Pseudomonas aeruginosa} PDB: 2wox_A* 3zqa_A* 2xdr_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=6.5e-97 Score=748.95 Aligned_cols=410 Identities=45% Similarity=0.770 Sum_probs=392.6
Q ss_pred CHHHHHHHHHhHHHHHHHHHHhcCCChHHHhhchHHHHHHHHHHHHHhhhhhcCcccccCCCcccceeecCCceEEEEcC
Q 015042 1 MWKFADLIEEHVEELAALDALDAGKVYLRAKTAEIPGAAEFLRFFAGAADKIHGEVLKMSSELQGYTLREPVGVVGHIIP 80 (414)
Q Consensus 1 L~~~a~~l~~~~~~l~~~~~~etGk~~~e~~~~ei~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p 80 (414)
|+++++.|++|+++|++++++|+|||..++...|+..+++.+++++.+.+++.+...+...+...+.+++|+|||++|+|
T Consensus 72 L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea~~~~v~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~P 151 (490)
T 2wme_A 72 LRRAVDILRERNDELAALETLDTGKPLAETRSVDIVTGADVLEYYAGLVPAIEGEQIPLRETSFVYTRREPLGVVAGIGA 151 (490)
T ss_dssp HHHHHHHHHHTHHHHHHHHHHHHCCCHHHHTTTHHHHHHHHHHHHHHHGGGCCEEEEEEETTEEEEEEEEECSEEEEECC
T ss_pred HHHHHHHHHHhHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhccccccCccccccCCcceeEEecceeEEEEecc
Confidence 57899999999999999999999999998766689999999999999998887776666566778999999999999999
Q ss_pred CccchHHHHHhHHHHHhhCCeEEeecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhhHHHhhhCCCccEEEEeCCc
Q 015042 81 WNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLTALYYAHLAKLAGIPDGVLNVVPGFGPTAGAAICSHMDIDYVCFTGST 160 (414)
Q Consensus 81 ~n~P~~~~~~~~~~aLaaGN~vv~kps~~~~~~~~~l~~~l~~aG~p~g~v~~v~~~~~~~~~~l~~~~~v~~v~~tGs~ 160 (414)
||||+...++++++||++||+||+|||+.+|+++..+++++.++|+|+|++|+|++++.++++.|+.||+||+|.||||+
T Consensus 152 wNfP~~~~~~~~a~ALaaGNtVVlKPse~tp~ta~~l~~l~~eaGlP~gv~~vv~g~g~~~g~~L~~~p~v~~I~FTGS~ 231 (490)
T 2wme_A 152 WNYPVQIALWKSAPALAAGNAMIFKPSEVTPLTALKLAEIYTEAGVPDGVFNVLTGSGREVGQWLTEHPLIEKISFTGGT 231 (490)
T ss_dssp SSSHHHHHHHHHHHHHHTTCEEEEECCTTSCHHHHHHHHHHHHHTCCTTSEEECCSCTTTHHHHHHHCTTCCEEEEESCH
T ss_pred ccCcchhhhhhHHHHHHcCCeEEEECCcCCHHHHHHHHHHHHHhCCCCCcEEEEeCChHHHHHHHHhCCCCCEEEEECCh
Confidence 99999999999999999999999999999999999999999999999999999999888999999999999999999999
Q ss_pred HHHHHHHHHHHhcccceeEEEcCCCCCceEcCCCCHHHHHHHHHHHhhccCCCCcccCceEEEeCchHHHHHHHHHHHHh
Q 015042 161 DVGRLVMQAAAASNLKQVSLELGGKSPLLIFDDADLDTAADVALLGNLYNKGEICVASSRVFVQEGIYDKFEKKLLEKAK 240 (414)
Q Consensus 161 ~~g~~i~~~~a~~~~~~~~~e~gg~~~~iV~~dadl~~aa~~i~~~~~~~~Gq~C~a~~~i~V~~~i~d~f~~~l~~~~~ 240 (414)
.+|+++.+.++.+++||+++|||||||+||++|||++.|++.+++++|.|+||.|++++|+|||+++||+|+++|+++++
T Consensus 232 ~~G~~i~~~~a~~~lk~v~lELGGk~p~iV~~dAdl~~A~~~~~~~~~~n~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~ 311 (490)
T 2wme_A 232 STGKKVMASASSSSLKEVTMELGGKSPLIIFPDADLDRAADIAVMANFFSSGQVCTNGTRVFIHRSQQARFEAKVLERVQ 311 (490)
T ss_dssp HHHHHHHHHHHHHHCCEEEEECCCCCEEEECTTSCHHHHHHHHHHHHHGGGGCCTTCCCEEEEEGGGHHHHHHHHHHHHH
T ss_pred HHHHHHHHhhhccCCceEEEEcCCcCeEEEccCccHHHHHHHHHHHHhccCCCcCCCceeeccchhHHHHHHHHHHHHHH
Confidence 99999987665478999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hcccCCCCCCCCcccccCCHHHHHHHHHHHHHHHHcCCEEEeCCcccC----CCCceeeeEEEeeCCCcccccccceecc
Q 015042 241 AWLVGDPFDPTVRQGPQISERHFDRILSYIEHGKREGATLLTGGKPIG----DKGYYIEPTIFTNVKEDMIIAKEEIFGP 316 (414)
Q Consensus 241 ~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~----~~g~~~~Ptvl~~~~~~~~~~~~E~fgP 316 (414)
++++|+|.++++++||+++..+++++.++|++++.+|+++++||.... .+|+|++|||+.+++++|.+++||+|||
T Consensus 312 ~l~vGdp~~~~~~~Gpli~~~~~~rv~~~i~~a~~~Ga~v~~gG~~~~~~~~~~G~~~~Ptvl~~v~~~~~i~~eEiFGP 391 (490)
T 2wme_A 312 RIRLGDPQDENTNFGPLVSFPHMESVLGYIESGKAQKARLLCGGERVTDGAFGKGAYVAPTVFTDCRDDMTIVREEIFGP 391 (490)
T ss_dssp TCCBSCTTSTTCCBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCSBCCTTTGGGTTCBCCEEEESCCTTSHHHHSCCCSS
T ss_pred hCcCCCCccccCccCCcCCHHHHHHHHHHHHHHHhcCCEEEECCcccCcccccCCCccCCEEEEcCCCCChhhhccccCC
Confidence 999999999999999999999999999999999999999999998753 3689999999999999999999999999
Q ss_pred eEEEEeeCCHHHHHHHhhcCCCCceEEEecCCHHHHHHHHHhcceeEEEEcCcCCCCCCCCcccCCCCCCCccchHHHHH
Q 015042 317 VMALMKFKTVEEAIKSANNTQYGLAAGIVTKDLNVANTVSRSIRAGIIWINCYFGFSMDCPYGGYKMSGFGREYGLESLY 396 (414)
Q Consensus 317 vl~v~~~~~~~eai~~~n~~~~gl~~sv~s~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~p~gG~~~sG~g~~~g~~~~~ 396 (414)
|++|++|+|+||||+++|+++|||++||||+|.++++++++++++|+|+||++....+.+||||+|.||+|+++|++|++
T Consensus 392 Vl~v~~~~~~deAi~~aN~~~yGL~a~v~t~d~~~a~~~~~~l~aG~v~iN~~~~~~~~~PFGG~k~SG~Gre~G~~gl~ 471 (490)
T 2wme_A 392 VMSILVYDDEDEAIRRANDTEYGLAAGVVTQDLARAHRAIHRLEAGICWINTWGESPAEMPVGGYKQSGVGRENGLTTLA 471 (490)
T ss_dssp EEEEEEESCHHHHHHHHHCSSCCSEEEEECSBHHHHHHHHHHSCCSEEEESCCSCCCTTSCBCCSGGGEESCBSHHHHHH
T ss_pred EEEEEEeCCHHHHHHHHhcCCCCCeEEEEcCCHHHHHHHHHHCCeeEEEEeCCCCCCCCCCcccccccccCchhHHHHHH
Confidence 99999999999999999999999999999999999999999999999999998888889999999999999999999999
Q ss_pred hhheeeEEEeeCCC
Q 015042 397 KYLQIKSVVTPIYN 410 (414)
Q Consensus 397 ~~~~~k~i~~~~~~ 410 (414)
+||+.|+|+++.+.
T Consensus 472 ~ft~~K~v~i~~g~ 485 (490)
T 2wme_A 472 HYTRIKSVQVELGD 485 (490)
T ss_dssp TTEEEEEEEEECSC
T ss_pred HhhceeEEEEECCC
Confidence 99999999999864
|
| >3ed6_A Betaine aldehyde dehydrogenase; structural genomics, infecti deseases, NAD, oxidoreductase, PSI; 1.70A {Staphylococcus aureus} PDB: 3fg0_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-93 Score=730.90 Aligned_cols=412 Identities=41% Similarity=0.742 Sum_probs=392.2
Q ss_pred CHHHHHHHHHhHHHHHHHHHHhcCCChHHHhhchHHHHHHHHHHHHHhhhhhcCcccccC-CCcccceeecCCceEEEEc
Q 015042 1 MWKFADLIEEHVEELAALDALDAGKVYLRAKTAEIPGAAEFLRFFAGAADKIHGEVLKMS-SELQGYTLREPVGVVGHII 79 (414)
Q Consensus 1 L~~~a~~l~~~~~~l~~~~~~etGk~~~e~~~~ei~~~~~~l~~~a~~~~~~~~~~~~~~-~~~~~~~~~~P~Gvv~~i~ 79 (414)
|+++++.|++|+++|++++++|+|||..++. .|+..+++.+++++.+.++..+...+.. .+...+++++|+|||++|+
T Consensus 100 L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea~-~ev~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~~P~GVV~~I~ 178 (520)
T 3ed6_A 100 VRAIADKIKEHREALARLETLDTGKTLEESY-ADMDDIHNVFMYFAGLADKDGGEMIDSPIPDTESKIVKEPVGVVTQIT 178 (520)
T ss_dssp HHHHHHHHHHTHHHHHHHHHHHHCCCHHHHH-HHHHHHHHHHHHHHHHTTSCCEEEECCSSTTEEEEEEEEECCEEEEEC
T ss_pred HHHHHHHHHHhHHHHHHHHHHHhCCCHHHHH-HHHHHHHHHHHHHHHHHHHhcCeecccCCCCCcccccccCccEEEEEC
Confidence 5789999999999999999999999999865 5999999999999999887766554433 4556789999999999999
Q ss_pred CCccchHHHHHhHHHHHhhCCeEEeecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhhHHHhhhCCCccEEEEeCC
Q 015042 80 PWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLTALYYAHLAKLAGIPDGVLNVVPGFGPTAGAAICSHMDIDYVCFTGS 159 (414)
Q Consensus 80 p~n~P~~~~~~~~~~aLaaGN~vv~kps~~~~~~~~~l~~~l~~aG~p~g~v~~v~~~~~~~~~~l~~~~~v~~v~~tGs 159 (414)
|||||+...++++++||++||+||+|||+.+|+++..+++++.++|+|+|+||++++++.++++.|+.||+||+|.||||
T Consensus 179 PwN~P~~~~~~~~apALaaGNtVVlKPs~~tp~t~~~l~~l~~eaGlP~gvvnvv~g~~~~~g~~L~~~p~vd~V~FTGS 258 (520)
T 3ed6_A 179 PWNYPLLQASWKIAPALATGCSLVMKPSEITPLTTIRVFELMEEVGFPKGTINLILGAGSEVGDVMSGHKEVDLVSFTGG 258 (520)
T ss_dssp CSSSHHHHHHHHHHHHHHHTCEEEEECCTTCCHHHHHHHHHHHHHCCCTTSEEECCSCCTTHHHHHHHCTTCSEEEEESC
T ss_pred CCccHHHHHHHHHHHHHHcCCEEEEEcCCcchHHHHHHHHHHHHhCCCCCeEEEEeCCChHHHHHHHhCCCcCEEEEECC
Confidence 99999999999999999999999999999999999999999999999999999999987889999999999999999999
Q ss_pred cHHHHHHHHHHHhcccceeEEEcCCCCCceEcCCCCHHHHHHHHHHHhhccCCCCcccCceEEEeCchHHHHHHHHHHHH
Q 015042 160 TDVGRLVMQAAAASNLKQVSLELGGKSPLLIFDDADLDTAADVALLGNLYNKGEICVASSRVFVQEGIYDKFEKKLLEKA 239 (414)
Q Consensus 160 ~~~g~~i~~~~a~~~~~~~~~e~gg~~~~iV~~dadl~~aa~~i~~~~~~~~Gq~C~a~~~i~V~~~i~d~f~~~l~~~~ 239 (414)
+.+|+.|++.++ ++++|+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|++++
T Consensus 259 ~~vG~~i~~~aa-~~l~~v~lELGGk~p~IV~~dADl~~Aa~~i~~~~f~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~ 337 (520)
T 3ed6_A 259 IETGKHIMKNAA-NNVTNIALELGGKNPNIIFDDADFELAVDQALNGGYFHAGQVCSAGSRILVQNSIKDKFEQALIDRV 337 (520)
T ss_dssp HHHHHHHHHHHH-TTTCEEEEECCCCCEEEECTTSCHHHHHHHHHHHHHGGGGTSTTCCCEEEEEHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhh-hcCCCEEEEcCCCCeeEECCCCCHHHHHHHHHHHHHhcCCCCcccCceEEEcHHHHHHHHHHHHHHH
Confidence 999999999998 8899999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhcccCCCCCCCCcccccCCHHHHHHHHHHHHHHHHcCCEEEeCCcccC----CCCceeeeEEEeeCCCcccccccceec
Q 015042 240 KAWLVGDPFDPTVRQGPQISERHFDRILSYIEHGKREGATLLTGGKPIG----DKGYYIEPTIFTNVKEDMIIAKEEIFG 315 (414)
Q Consensus 240 ~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~----~~g~~~~Ptvl~~~~~~~~~~~~E~fg 315 (414)
+++++|+|.|+++++||+++..+++++.+++++++++|+++++||.... ..|+|++|||+.+++++|++++||+||
T Consensus 338 ~~l~vG~p~d~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~v~~gG~~~~~~~~~~g~f~~PTvl~~v~~~~~i~~eEiFG 417 (520)
T 3ed6_A 338 KKIKLGNGFDADTEMGPVISTEHRNKIESYMDVAKAEGATIAVGGKRPDRDDLKDGLFFEPTVITNCDTSMRIVQEEVFG 417 (520)
T ss_dssp TTCCBCCTTSTTCSBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCSCCCCGGGTTTTCCCCEEEESCCTTSHHHHSCCCS
T ss_pred HhccCCCCccCCCcccccCCHHHHHHHHHHHHHHHhCCCEEEeCCCcCccccCCCCceECCeEEecCCCCCccccCceeC
Confidence 9999999999999999999999999999999999999999999998642 479999999999999999999999999
Q ss_pred ceEEEEeeCCHHHHHHHhhcCCCCceEEEecCCHHHHHHHHHhcceeEEEEcCcCCCCCCCCcccCCCCCCCccchHHHH
Q 015042 316 PVMALMKFKTVEEAIKSANNTQYGLAAGIVTKDLNVANTVSRSIRAGIIWINCYFGFSMDCPYGGYKMSGFGREYGLESL 395 (414)
Q Consensus 316 Pvl~v~~~~~~~eai~~~n~~~~gl~~sv~s~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~p~gG~~~sG~g~~~g~~~~ 395 (414)
||++|++|+|+||||+++|+++|||++||||+|.++++++++++++|+|+||++....+.+||||+|.||+|+++|++|+
T Consensus 418 PVl~v~~~~~~deAi~~aN~~~~GL~a~v~t~d~~~a~~~a~~l~aG~V~iN~~~~~~~~~PfGG~k~SG~Gre~G~~gl 497 (520)
T 3ed6_A 418 PVVTVEGFETEQEAIQLANDSIYGLAGAVFSKDIGKAQRVANKLKLGTVWINDFHPYFAQAPWGGYKQSGIGRELGKEGL 497 (520)
T ss_dssp SEEEEEEESSHHHHHHHHTCSSCCSEEEEECSCHHHHHHHHHHSCCSEEEESCSCCCCTTSCBCCSGGGEESCBSHHHHH
T ss_pred cEEEEEEeCCHHHHHHHHhCCCCCcEEEEECCCHHHHHHHHHHCCcceEEECCCCCCCCCCCcCCcCcCcCCccchHHHH
Confidence 99999999999999999999999999999999999999999999999999999887788999999999999999999999
Q ss_pred HhhheeeEEEeeCC--CCCCC
Q 015042 396 YKYLQIKSVVTPIY--NSPWL 414 (414)
Q Consensus 396 ~~~~~~k~i~~~~~--~~~~~ 414 (414)
++||+.|+|+++.+ ..+||
T Consensus 498 ~~~t~~k~v~~~~~~~~~~~~ 518 (520)
T 3ed6_A 498 EEYLVSKHILTNTNPQLVNWF 518 (520)
T ss_dssp HTTEEEEEEEEESSCCCCCCS
T ss_pred HHhhceEEEEEcCCCCccCcc
Confidence 99999999999876 45676
|
| >3ros_A NAD-dependent aldehyde dehydrogenase; nysgrc, PSI-biology, structural genomics, NEW YORK structura genomics research consortium; 1.88A {Lactobacillus acidophilus} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.6e-93 Score=722.81 Aligned_cols=406 Identities=28% Similarity=0.456 Sum_probs=388.2
Q ss_pred CHHHHHHHHHhHHHHHHHHHHhcCCChHHHhhchHHHHHHHHHHHHHhhhhhcCcccccCCCcccceeecCCceEEEEcC
Q 015042 1 MWKFADLIEEHVEELAALDALDAGKVYLRAKTAEIPGAAEFLRFFAGAADKIHGEVLKMSSELQGYTLREPVGVVGHIIP 80 (414)
Q Consensus 1 L~~~a~~l~~~~~~l~~~~~~etGk~~~e~~~~ei~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p 80 (414)
|+++++.|++|+++|++++++|+|||..++. .|+..+++.+++++..+++..+...+...+...+.+++|+|||++|+|
T Consensus 54 L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea~-~ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~P~GVV~~I~P 132 (484)
T 3ros_A 54 LHDIANALKEHEDELAKMMTLEMGKLLSESK-EEVELCVSICNYYADHGPEMLKPTKLNSDLGNAYYLKQSTGVIMACEP 132 (484)
T ss_dssp HHHHHHHHHHTHHHHHHHHHHHHCCCHHHHH-HHHHHHHHHHHHHHHHHHHHTSCEEECCTTSEEEEEEECCCEEEEECC
T ss_pred HHHHHHHHHHhHHHHHHHHHHHhCCCHHHHH-HHHHHHHHHHHHHHHHHHHhcCCeeccCCCceeEEEecCCceEEEECC
Confidence 5789999999999999999999999999875 699999999999999988776654443355678999999999999999
Q ss_pred CccchHHHHHhHHHHHhhCCeEEeecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhhHHHhhhCCCccEEEEeCCc
Q 015042 81 WNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLTALYYAHLAKLAGIPDGVLNVVPGFGPTAGAAICSHMDIDYVCFTGST 160 (414)
Q Consensus 81 ~n~P~~~~~~~~~~aLaaGN~vv~kps~~~~~~~~~l~~~l~~aG~p~g~v~~v~~~~~~~~~~l~~~~~v~~v~~tGs~ 160 (414)
||||+...++++++||++||+||+|||+.+|.++..+.+++.++|+|+|++|++++++.+.++ |+.||+||+|+||||+
T Consensus 133 wN~P~~~~~~~~a~ALaaGN~VVlKps~~tp~t~~~l~~l~~~aGlP~gvv~vv~g~~~~~~~-L~~~p~vd~I~fTGS~ 211 (484)
T 3ros_A 133 WNFPLYQVIRVFAPNFIVGNPILLKHAHNVPGSAALTAKIIKRAGAPEGSLINLYPSYDQLAD-IIADPRIQGVALTGSE 211 (484)
T ss_dssp SSSTTHHHHHHHHHHHHHTCCEEEECCTTCHHHHHHHHHHHHHHTCCTTSEEEECCCHHHHHH-HHTSTTEEEEEEESCH
T ss_pred CchHHHHHHHHHHHHHHcCCEEEEECCCCChHHHHHHHHHHHHhCcCcCeEEEEeCChHHHHH-HHhCCCcCEEEEECCH
Confidence 999999999999999999999999999999999999999999999999999999997777788 9999999999999999
Q ss_pred HHHHHHHHHHHhcccceeEEEcCCCCCceEcCCCCHHHHHHHHHHHhhccCCCCcccCceEEEeCchHHHHHHHHHHHHh
Q 015042 161 DVGRLVMQAAAASNLKQVSLELGGKSPLLIFDDADLDTAADVALLGNLYNKGEICVASSRVFVQEGIYDKFEKKLLEKAK 240 (414)
Q Consensus 161 ~~g~~i~~~~a~~~~~~~~~e~gg~~~~iV~~dadl~~aa~~i~~~~~~~~Gq~C~a~~~i~V~~~i~d~f~~~l~~~~~ 240 (414)
.+|+.|++.++ ++++|+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++
T Consensus 212 ~~G~~i~~~aa-~~lk~v~lELGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~ 290 (484)
T 3ros_A 212 RGGSAVAEAAG-KNLKKSTMELGGNDAFIVLDDADPQVLRNVLNDARTYNDGQVCTSSKRIIVEKSRYDEVLHELKNVFS 290 (484)
T ss_dssp HHHHHHHHHHH-HTTCEEEEECCCCCEEEECTTCCHHHHHHHHTTTTTGGGGCCTTSCCEEEEEGGGHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHh-ccCCceEeecCCCCcceeCCCCCHHHHHHHHHHHHhcCCCCCccCCceEEEcHHHHHHHHHHHHHHHH
Confidence 99999999988 88999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hcccCCCCCCCCcccccCCHHHHHHHHHHHHHHHHcCCEEEeCCcccCCCCceeeeEEEeeCCCcccccccceecceEEE
Q 015042 241 AWLVGDPFDPTVRQGPQISERHFDRILSYIEHGKREGATLLTGGKPIGDKGYYIEPTIFTNVKEDMIIAKEEIFGPVMAL 320 (414)
Q Consensus 241 ~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v 320 (414)
++++|+|.++++++||+++..+++++.+++++++++|+++++||...+..|+|++|||+.+++++|++++||+||||++|
T Consensus 291 ~~~~G~p~~~~~~~gpli~~~~~~rv~~~i~~a~~~Ga~v~~gG~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v 370 (484)
T 3ros_A 291 NLKAGDPLEADTTLPPMNSEKAKEKLEAQVKEAIDAGAKVFYQYPEIDSKGAFFRPTILTDIAKDNPVFDKEVFGPIAEV 370 (484)
T ss_dssp TCCBSCTTSTTCCBCCCSCHHHHHHHHHHHHHHHHTTCEEEEECCCCCCSSCCCCCEEEECCCTTSTTTTSCCCSSEEEE
T ss_pred hccCCCCCCCCCccCCCCCHHHHHHHHHHHHHHHHcCCeEEecCCcCCCCCceeCCeEeecCCCCCcccccccccceEEE
Confidence 99999999999999999999999999999999999999999999865568999999999999999999999999999999
Q ss_pred EeeCCHHHHHHHhhcCCCCceEEEecCCHHHHHHHHHhcceeEEEEcCcCCCCCCCCcccCCCCCCCccchHHHHHhhhe
Q 015042 321 MKFKTVEEAIKSANNTQYGLAAGIVTKDLNVANTVSRSIRAGIIWINCYFGFSMDCPYGGYKMSGFGREYGLESLYKYLQ 400 (414)
Q Consensus 321 ~~~~~~~eai~~~n~~~~gl~~sv~s~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~p~gG~~~sG~g~~~g~~~~~~~~~ 400 (414)
++|+|+||||+++|+++|||++||||+|.+.++++++++++|+|+||++....+.+||||+|.||+|+++|++|+++||+
T Consensus 371 ~~~~~~deAi~~aN~~~~GL~a~v~t~d~~~a~~~~~~l~aG~V~vN~~~~~~~~~PfGG~k~SG~Gr~~G~~gl~~ft~ 450 (484)
T 3ros_A 371 FVVEDDNAAIQLANDSSYGLGSSVIGSDIDRAKKVSAQIETGMTVINGRWITSGELPFGGIKKSGYGRELSGLGLMAFVN 450 (484)
T ss_dssp EEESSHHHHHHHHHSSSCCSCEEEECSCHHHHHHHHHHSCSSCCEETSCCCCCTTSCBCCSGGGEESCBSHHHHHTTTCE
T ss_pred EEcCCHHHHHHHHhCCCCCcEEEEECCCHHHHHHHHHhCccceEEECCCCCCCCCCCcCCcCcccCCcCchHHHHHHhhe
Confidence 99999999999999999999999999999999999999999999999988788999999999999999999999999999
Q ss_pred eeEEEeeCC
Q 015042 401 IKSVVTPIY 409 (414)
Q Consensus 401 ~k~i~~~~~ 409 (414)
.|+|+++..
T Consensus 451 ~K~v~~~~~ 459 (484)
T 3ros_A 451 EHLVIDVTK 459 (484)
T ss_dssp EEEEEECGG
T ss_pred eEEEEECCC
Confidence 999988754
|
| >3rh9_A Succinate-semialdehyde dehydrogenase (NAD(P)(+)); structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.63A {Marinobacter aquaeolei} | Back alignment and structure |
|---|
Probab=100.00 E-value=4.1e-93 Score=724.43 Aligned_cols=407 Identities=35% Similarity=0.641 Sum_probs=388.2
Q ss_pred CHHHHHHHHHhHHHHHHHHHHhcCCChHHHhhchHHHHHHHHHHHHHhhhhhcCcccccCCCcccceee-cCCceEEEEc
Q 015042 1 MWKFADLIEEHVEELAALDALDAGKVYLRAKTAEIPGAAEFLRFFAGAADKIHGEVLKMSSELQGYTLR-EPVGVVGHII 79 (414)
Q Consensus 1 L~~~a~~l~~~~~~l~~~~~~etGk~~~e~~~~ei~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~-~P~Gvv~~i~ 79 (414)
|+++++.|++|+++|++++++|+|||..++. .|+..+++.+++++.++++..+...+...+...++++ +|+|||++|+
T Consensus 77 L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea~-~ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVV~~I~ 155 (506)
T 3rh9_A 77 LEDIRDGLKENREEIGRILCMEHGKPWKEAQ-GEVDYAAGFFDYCAKHISALDSHTIPEKPKDCTWTVHYRPVGVTGLIV 155 (506)
T ss_dssp HHHHHHHHHHTHHHHHHHHHHHHCCCHHHHH-HHHHHHHHHHHHHHHHGGGGCCEECSCCGGGCEEEEEEEECCSEEEEC
T ss_pred HHHHHHHHHHhHHHHHHHHHHHhCCCHHHHH-HHHHHHHHHHHHHHHHHHHhcCcccccCCCceeeEeecccceEEEEEC
Confidence 5789999999999999999999999999875 7999999999999999988766655443456678889 9999999999
Q ss_pred CCccchHHHHHhHHHHHhhCCeEEeecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhhHHHhhhCCCccEEEEeCC
Q 015042 80 PWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLTALYYAHLAKLAGIPDGVLNVVPGFGPTAGAAICSHMDIDYVCFTGS 159 (414)
Q Consensus 80 p~n~P~~~~~~~~~~aLaaGN~vv~kps~~~~~~~~~l~~~l~~aG~p~g~v~~v~~~~~~~~~~l~~~~~v~~v~~tGs 159 (414)
|||||+...++++++||++||+||+|||+.+|+++..+++++.++|+|+|++|++++++.+.++.|+.||+||+|+||||
T Consensus 156 PwN~P~~~~~~~~a~ALaaGN~VVlKps~~tp~t~~~l~~l~~eaGlP~gvv~vv~g~~~~~g~~L~~~p~vd~I~FTGS 235 (506)
T 3rh9_A 156 PWNFPIGMIAKKLSAALAAGCPSVIKPASETPLTMIAFFSVMDKLDLPDGMVNLVMGKASVIGKVLCEHKDVPMLSFTGS 235 (506)
T ss_dssp CSSSTTHHHHHHHHHHHHHTCCEEEECCTTSCHHHHHHHHHHTTTTCCTTSEEECCSCHHHHHHHHHHCTTCCEEEEESC
T ss_pred CCchHHHHHHHHHHHHHHcCCEEEEEcCCccHHHHHHHHHHHHHhCcChhhEEEEeCCChHHHHHHHhCCCCCEEEEECC
Confidence 99999999999999999999999999999999999999999999999999999999988889999999999999999999
Q ss_pred cHHHHHHHHHHHhcccceeEEEcCCCCCceEcCCCCHHHHHHHHHHHhhccCCCCcccCceEEEeCchHHHHHHHHHHHH
Q 015042 160 TDVGRLVMQAAAASNLKQVSLELGGKSPLLIFDDADLDTAADVALLGNLYNKGEICVASSRVFVQEGIYDKFEKKLLEKA 239 (414)
Q Consensus 160 ~~~g~~i~~~~a~~~~~~~~~e~gg~~~~iV~~dadl~~aa~~i~~~~~~~~Gq~C~a~~~i~V~~~i~d~f~~~l~~~~ 239 (414)
+.+|+.|++.++ ++++|+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||++++|+|+++|++++
T Consensus 236 ~~vG~~i~~~aa-~~l~~v~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~ 314 (506)
T 3rh9_A 236 TEVGRKLIVDTA-EQVKKLALELGGNAPFIVFDDADLEAAADNLIANKFRGGGQTCVCANRIFVHEKVADAFGQKLAERV 314 (506)
T ss_dssp HHHHHHHHHHTT-TTTCEEEEECCCCCEEEECTTSCHHHHHHHHHHHHHGGGGCSSSSCCEEEEETTTHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhh-hcCCceEEecCCCCceEECCCCCHHHHHHHHHHHHHHhCCCCcccCcEEEEcHHHHHHHHHHHHHHH
Confidence 999999999988 8899999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhcccCCCCCCCCcccccCCHHHHHHHHHHHHHHHHcCCEEEeCCcccCC-CCceeeeEEEeeCCCcccccccceecceE
Q 015042 240 KAWLVGDPFDPTVRQGPQISERHFDRILSYIEHGKREGATLLTGGKPIGD-KGYYIEPTIFTNVKEDMIIAKEEIFGPVM 318 (414)
Q Consensus 240 ~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~~-~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl 318 (414)
+++++|+|.++++++||+++..+++++.+++++++++|+++++||...+. .|+|++|||+.+++++|++++||+||||+
T Consensus 315 ~~~~~G~p~~~~~~~Gpli~~~~~~rv~~~i~~a~~~Ga~v~~gG~~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl 394 (506)
T 3rh9_A 315 NKMTVGDGMNDGIDIGPLINKQGFDKVKRHLQDALDKGASLVAGKQPAELGDGLFFPPTVVQGVDREMCCYQEETFGPLV 394 (506)
T ss_dssp HHCCBSCTTSTTCSBCCCSCHHHHHHHHHHHHHHHHTTCEEEESCCGGGCCSSSCCCCEEEECCCTTSHHHHSCCCSSEE
T ss_pred HhccCCCCcccCCcccccCCHHHHHHHHHHHHHHHHCCCEEEecCCcCCCCCCcEECCeEEccCCCCChhhcccccCcEE
Confidence 99999999999999999999999999999999999999999999986444 79999999999999999999999999999
Q ss_pred EEEeeCCHHHHHHHhhcCCCCceEEEecCCHHHHHHHHHhcceeEEEEcCcCCCCCCCCcccCCCCCCCccchHHHHHhh
Q 015042 319 ALMKFKTVEEAIKSANNTQYGLAAGIVTKDLNVANTVSRSIRAGIIWINCYFGFSMDCPYGGYKMSGFGREYGLESLYKY 398 (414)
Q Consensus 319 ~v~~~~~~~eai~~~n~~~~gl~~sv~s~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~p~gG~~~sG~g~~~g~~~~~~~ 398 (414)
+|++|+|+||||+++|+++|||++||||+|.+.++++++++++|+|+||++....+.+||||+|.||+|+++|++|+++|
T Consensus 395 ~v~~~~~~deAi~~aN~~~~gLaa~v~t~d~~~a~~~~~~l~aG~V~vN~~~~~~~~~PfGG~k~SG~G~~~G~~gl~~f 474 (506)
T 3rh9_A 395 PMALFRTEEEVIDAGNDTEFGLASYVFTADAERAQRVAAGLRFGHVGWNTGTGPTPEAPFGGMKASGIGREGGLEGLFEF 474 (506)
T ss_dssp EEEEECCHHHHHHHHTCSSCCSEEEEECSCHHHHHHHHHHCCCSEEEESCCCCCCTTSCBCCSGGGEESCBSHHHHHTTT
T ss_pred EEEEeCCHHHHHHHHhCCCCCceEEEEcCCHHHHHHHHHhCCcceEEEcCCCCCCCCCCccCcCcCcCCcCccHHHHHHh
Confidence 99999999999999999999999999999999999999999999999999988888999999999999999999999999
Q ss_pred heeeEEEeeCC
Q 015042 399 LQIKSVVTPIY 409 (414)
Q Consensus 399 ~~~k~i~~~~~ 409 (414)
|+.|+|+++..
T Consensus 475 t~~K~v~~~~~ 485 (506)
T 3rh9_A 475 VEAQTVPRGFA 485 (506)
T ss_dssp EEEEEEEEC--
T ss_pred cceEEEEEcCc
Confidence 99999988654
|
| >3u4j_A NAD-dependent aldehyde dehydrogenase; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, tetramer; 2.00A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=100.00 E-value=5.3e-93 Score=727.13 Aligned_cols=412 Identities=44% Similarity=0.725 Sum_probs=392.9
Q ss_pred CHHHHHHHHHhHHHHHHHHHHhcCCChHHHhhchHHHHHHHHHHHHHhhhhhcCcccccC-CCcccceeecCCceEEEEc
Q 015042 1 MWKFADLIEEHVEELAALDALDAGKVYLRAKTAEIPGAAEFLRFFAGAADKIHGEVLKMS-SELQGYTLREPVGVVGHII 79 (414)
Q Consensus 1 L~~~a~~l~~~~~~l~~~~~~etGk~~~e~~~~ei~~~~~~l~~~a~~~~~~~~~~~~~~-~~~~~~~~~~P~Gvv~~i~ 79 (414)
|+++++.|++|+++|++++++|+|||..++ ..|+..+++.++++++++++..+...+.. .+...+++++|+|||++|+
T Consensus 91 L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea-~~ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVV~~I~ 169 (528)
T 3u4j_A 91 MFKVADLILARQEELALIESLEVGKPIAQA-RGEIGFCADLWSYAAGQARALEGQTHNNIGDDRLGLVLREPVGVVGIIT 169 (528)
T ss_dssp HHHHHHHHHHTHHHHHHHHHHHHCCCHHHH-HHHHHHHHHHHHHHHHHHTTCCEEEECCSCTTEEEEEEEEECCEEEEEC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCCHHHH-HHHHHHHHHHHHHHHHHHHHhcCeeeccCCCCceeEEEeccceEEEEEC
Confidence 578999999999999999999999999987 67999999999999999887766555443 4566889999999999999
Q ss_pred CCccchHHHHHhHHHHHhhCCeEEeecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhhHHHhhhCCCccEEEEeCC
Q 015042 80 PWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLTALYYAHLAKLAGIPDGVLNVVPGFGPTAGAAICSHMDIDYVCFTGS 159 (414)
Q Consensus 80 p~n~P~~~~~~~~~~aLaaGN~vv~kps~~~~~~~~~l~~~l~~aG~p~g~v~~v~~~~~~~~~~l~~~~~v~~v~~tGs 159 (414)
|||||+...++++++||++||+||+|||+.+|+++..+++++.++|+|+|++|++++.+.++++.|+.||+||+|+||||
T Consensus 170 PwN~P~~~~~~~~a~ALaaGN~VVlKps~~tp~t~~~l~~l~~eaGlP~gvv~vv~g~~~~~g~~L~~~p~vd~I~FTGS 249 (528)
T 3u4j_A 170 PWNFPFIIASERVPWAIGSGCTVVLKPSEFTSGTSIRLAELAREAGIPDGVFNVVTGYGDPAGQVLAEDPNVDMVAFTGS 249 (528)
T ss_dssp CSSSHHHHHHHHHHHHHHTTCEEEEECCTTCCHHHHHHHHHHHHHTCCTTSEEECCCSSTTHHHHHHHCTTCCEEEEESC
T ss_pred CCccHHHHHHHHHHHHHHcCCeEEEEcCCccHHHHHHHHHHHHHhCCCCCeEEEEeCCcHHHHHHHHhCCCcCEEEEeCC
Confidence 99999999999999999999999999999999999999999999999999999999988889999999999999999999
Q ss_pred cHHHHHHHHHHHhcccceeEEEcCCCCCceEcCCCCHHHHHHHHHHHhhccCCCCcccCceEEEeCchHHHHHHHHHHHH
Q 015042 160 TDVGRLVMQAAAASNLKQVSLELGGKSPLLIFDDADLDTAADVALLGNLYNKGEICVASSRVFVQEGIYDKFEKKLLEKA 239 (414)
Q Consensus 160 ~~~g~~i~~~~a~~~~~~~~~e~gg~~~~iV~~dadl~~aa~~i~~~~~~~~Gq~C~a~~~i~V~~~i~d~f~~~l~~~~ 239 (414)
+.+|+.|++.++ ++++|+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|++++
T Consensus 250 ~~~G~~i~~~aa-~~lk~v~lELGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~ 328 (528)
T 3u4j_A 250 VRVGTKLGEIAA-RTVKRVGLELGGKGPQIVFADADLDAAADGIAYGVYHNAGQCCISGSRLLVQEGIRDALMERLLDIS 328 (528)
T ss_dssp HHHHHHHHHHHH-TTTCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCCTTCEEEEEEEGGGHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH-hcCCceEEecCCCCeeEECCCCCHHHHHHHHHHHHhhcCCCCCcCCCEEEEechHHHHHHHHHHHHH
Confidence 999999999988 8999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhcccCCCCCCCCcccccCCHHHHHHHHHHHHHHHHcCCEEEeCCcccCC-CCceeeeEEEeeCCCcccccccceecceE
Q 015042 240 KAWLVGDPFDPTVRQGPQISERHFDRILSYIEHGKREGATLLTGGKPIGD-KGYYIEPTIFTNVKEDMIIAKEEIFGPVM 318 (414)
Q Consensus 240 ~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~~-~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl 318 (414)
+++++|+|.++++++||+++..+++++.+++++++++|+++++||..... .|+|++|||+.+++++|++++||+||||+
T Consensus 329 ~~~~~G~p~~~~~~~Gpli~~~~~~rv~~~i~~a~~~Ga~v~~gG~~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl 408 (528)
T 3u4j_A 329 RKVAFGDPLNERTKIGAMISEAHAEKVHSYVTAGITSGAELLLGGERIGREAGLYYAPTVFAGVTPDMSIAREEIFGPVL 408 (528)
T ss_dssp HHCCEECTTSTTCSBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCSEECTTTSCEECCEEEESCCTTSHHHHSCCCSSEE
T ss_pred HhhcCCCCCCcCCccCCccCHHHHHHHHHHHHHHHHCCCEEEeCCCcCCCCCCcEecceEEecCCCCCccccceeeccEE
Confidence 99999999999999999999999999999999999999999999987544 79999999999999999999999999999
Q ss_pred EEEeeCCHHHHHHHhhcCCCCceEEEecCCHHHHHHHHHhcceeEEEEcCcCCCCCCCCcccCCCCCCCccchHHHHHhh
Q 015042 319 ALMKFKTVEEAIKSANNTQYGLAAGIVTKDLNVANTVSRSIRAGIIWINCYFGFSMDCPYGGYKMSGFGREYGLESLYKY 398 (414)
Q Consensus 319 ~v~~~~~~~eai~~~n~~~~gl~~sv~s~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~p~gG~~~sG~g~~~g~~~~~~~ 398 (414)
+|++|+|+||||+++|+++|||++||||+|.+.++++++++++|+|+||++....+.+||||+|.||+|+++|++|+++|
T Consensus 409 ~v~~~~~~deAi~~aN~~~~GL~a~v~t~d~~~a~~~~~~l~aG~V~vN~~~~~~~~~PfGG~k~SG~Gr~~G~~gl~~f 488 (528)
T 3u4j_A 409 STLTFKTADEAVALANATEFGLSASVWSTNLETALQTIRRIRAGRCWINSVIDGTPELPIGGYKKSGLGRELGRYGFDEY 488 (528)
T ss_dssp EEEEESSHHHHHHHHHCSSCCSEEEEECSBHHHHHHHHHHSCCSEEEESCCSCCCTTSCBCCSGGGEESCBSTTHHHHHT
T ss_pred EEEEeCCHHHHHHHHhcCCCCcEEEEEcCCHHHHHHHHHhCCeeEEEECCCCCCCCCCCcCCcCcCCCCcCchHHHHHHh
Confidence 99999999999999999999999999999999999999999999999999988888999999999999999999999999
Q ss_pred heeeEEEeeCC-CCCCC
Q 015042 399 LQIKSVVTPIY-NSPWL 414 (414)
Q Consensus 399 ~~~k~i~~~~~-~~~~~ 414 (414)
|+.|+|+++.+ ..+||
T Consensus 489 t~~K~v~~~~~~~~~~~ 505 (528)
T 3u4j_A 489 SQFKGVHVTLGRPAPWF 505 (528)
T ss_dssp EEEEEEEEESSCCCCSC
T ss_pred hceEEEEEeCCCCCCcc
Confidence 99999998875 45676
|
| >3ifg_A Succinate-semialdehyde dehydrogenase (NADP+); niaid,.infectious disease, ssgcid, seattle structural genomi for infectious disease; 2.70A {Burkholderia pseudomallei} PDB: 3ifh_Q | Back alignment and structure |
|---|
Probab=100.00 E-value=2.9e-93 Score=723.10 Aligned_cols=405 Identities=39% Similarity=0.642 Sum_probs=386.9
Q ss_pred CHHHHHHHHHhHHHHHHHHHHhcCCChHHHhhchHHHHHHHHHHHHHhhhhhcCcccccC-CCcccceeecCCceEEEEc
Q 015042 1 MWKFADLIEEHVEELAALDALDAGKVYLRAKTAEIPGAAEFLRFFAGAADKIHGEVLKMS-SELQGYTLREPVGVVGHII 79 (414)
Q Consensus 1 L~~~a~~l~~~~~~l~~~~~~etGk~~~e~~~~ei~~~~~~l~~~a~~~~~~~~~~~~~~-~~~~~~~~~~P~Gvv~~i~ 79 (414)
|+++++.|++|+++|++++++|+|||..++ ..|+..+++.+++++.+.++..+...+.. .+...+.+++|+|||++|+
T Consensus 78 L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a-~~ev~~~~~~l~~~a~~~~~~~g~~~~~~~~~~~~~~~~~P~GVv~~I~ 156 (484)
T 3ifg_A 78 LRRWFDLVIANSDDLALILTTEQGKPLAEA-KGEIAYAASFIEWFAEEGKRVAGDTLPTPDANKRIVVVKEPIGVCAAIT 156 (484)
T ss_dssp HHHHHHHHHHTHHHHHHHHHHHHCCCHHHH-HHHHHHHHHHHHHHHHHHTTCCEEEECCSSTTEEEEEEEEECSSEEEEC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHcCCCHHHH-HHHHHHHHHHHHHHHHHHHhhcCccccccCCCceeEEEecCCcEEEEEC
Confidence 578999999999999999999999999975 46999999999999998877666554432 4567889999999999999
Q ss_pred CCccchHHHHHhHHHHHhhCCeEEeecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhhHHHhhhCCCccEEEEeCC
Q 015042 80 PWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLTALYYAHLAKLAGIPDGVLNVVPGFGPTAGAAICSHMDIDYVCFTGS 159 (414)
Q Consensus 80 p~n~P~~~~~~~~~~aLaaGN~vv~kps~~~~~~~~~l~~~l~~aG~p~g~v~~v~~~~~~~~~~l~~~~~v~~v~~tGs 159 (414)
|||||+...++++++||++||+||+|||+.+|+++..+++++.++|+|+|++|++++++.++++.|+.||+||+|.||||
T Consensus 157 PwN~P~~~~~~~~a~ALaaGN~VVlKps~~tp~t~~~l~~l~~~aGlP~gv~~vv~g~~~~~g~~L~~~p~v~~v~FTGS 236 (484)
T 3ifg_A 157 PWNFPAAMIARKVGPALAAGCPIVVKPAESTPFSALAMAFLAERAGVPKGVLSVVIGDPKAIGTEITSNPIVRKLSFTGS 236 (484)
T ss_dssp CSSSTTHHHHHHHHHHHHHTCCEEEECCTTSCHHHHHHHHHHHHHTCCTTSEEECCBCHHHHHHHHHHCTTCCEEEEESC
T ss_pred CCcChHHHHHHHHHHHHHcCCEEEEECCCCCcHHHHHHHHHHHHhCCCcccEEEEeCCCHHHHHHHHhCCCcCEEEEECC
Confidence 99999999999999999999999999999999999999999999999999999999877889999999999999999999
Q ss_pred cHHHHHHHHHHHhcccceeEEEcCCCCCceEcCCCCHHHHHHHHHHHhhccCCCCcccCceEEEeCchHHHHHHHHHHHH
Q 015042 160 TDVGRLVMQAAAASNLKQVSLELGGKSPLLIFDDADLDTAADVALLGNLYNKGEICVASSRVFVQEGIYDKFEKKLLEKA 239 (414)
Q Consensus 160 ~~~g~~i~~~~a~~~~~~~~~e~gg~~~~iV~~dadl~~aa~~i~~~~~~~~Gq~C~a~~~i~V~~~i~d~f~~~l~~~~ 239 (414)
+.+|+.|++.++ ++++|+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|++++
T Consensus 237 ~~~G~~i~~~aa-~~~k~v~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~ 315 (484)
T 3ifg_A 237 TAVGRLLMAQSA-PTVKKLTLELGGNAPFIVFDDADLDAAVEGAIASKYRNNGQTCVCTNRFFVHERVYDAFADKLAAAV 315 (484)
T ss_dssp HHHHHHHHHHTG-GGTCEEEEECCCCCEEEECTTSCHHHHHHHHHHHHHGGGGCSTTCCCEEEEEGGGHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhh-ccCCceEEecCCCCeEEECCCCCHHHHHHHHHHHHHhcCCCcccCCCeEEEcHHHHHHHHHHHHHHH
Confidence 999999999988 8899999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhcccCCCCCCCCcccccCCHHHHHHHHHHHHHHHHcCCEEEeCCcccCCCCceeeeEEEeeCCCcccccccceecceEE
Q 015042 240 KAWLVGDPFDPTVRQGPQISERHFDRILSYIEHGKREGATLLTGGKPIGDKGYYIEPTIFTNVKEDMIIAKEEIFGPVMA 319 (414)
Q Consensus 240 ~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~ 319 (414)
+++++|+|.++++++||+++..+++++.+++++++++|+++++||......|+|++|||+.+++++|++++||+||||++
T Consensus 316 ~~~~~G~p~~~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~v~~gG~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~ 395 (484)
T 3ifg_A 316 SKLKVGRGTESGATLGPLINEAAVKKVESHIADALAKGASLMTGGKRHALGHGFFEPTVLTGVKPDMDVAKEETFGPLAP 395 (484)
T ss_dssp HTCCBSCTTSTTCCBCCCSSHHHHHHHHHHHHHHHHTTCEEEECCSBCTTCTTCBCCEEEEEECTTSGGGTSCCCSSEEE
T ss_pred HhccCCCCCCCCCCCCCCcCHHHHHHHHHHHHHHHHCCCEEEECCCccCCCCceEcCEEEecCCCCChhhCCeeeCcEEE
Confidence 99999999999999999999999999999999999999999999987555799999999999999999999999999999
Q ss_pred EEeeCCHHHHHHHhhcCCCCceEEEecCCHHHHHHHHHhcceeEEEEcCcCCCCCCCCcccCCCCCCCccchHHHHHhhh
Q 015042 320 LMKFKTVEEAIKSANNTQYGLAAGIVTKDLNVANTVSRSIRAGIIWINCYFGFSMDCPYGGYKMSGFGREYGLESLYKYL 399 (414)
Q Consensus 320 v~~~~~~~eai~~~n~~~~gl~~sv~s~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~p~gG~~~sG~g~~~g~~~~~~~~ 399 (414)
|++|+|+||||+++|+++|||++||||+|.++++++++++++|+|+||++....+.+||||+|+||+|+++|++|+++||
T Consensus 396 v~~~~~~deAi~~aN~~~~GL~a~v~t~d~~~a~~~~~~l~aG~v~iN~~~~~~~~~PfGG~k~SG~Gr~~g~~gl~~~~ 475 (484)
T 3ifg_A 396 LFRFASEEELVRLANDTEFGLAAYLYSRDIGRVWRVAEALEYGMVGINTGLISNEVAPFGGVKQSGLGREGSHYGIDDYV 475 (484)
T ss_dssp EEEECCHHHHHHHHHCSSEESEEEEECCBHHHHHHHHHHCCCSEEEESCSCCCCSSSCBCCEETTEECCBSTTTTTGGGE
T ss_pred EEEeCCHHHHHHHHhCCCCCceEEEECCCHHHHHHHHHhCCcceEEEcCCCCCCCCCCcCCcCcCcCCCCchHHHHHHhh
Confidence 99999999999999999999999999999999999999999999999998777789999999999999999999999999
Q ss_pred eeeEEEee
Q 015042 400 QIKSVVTP 407 (414)
Q Consensus 400 ~~k~i~~~ 407 (414)
+.|+|++.
T Consensus 476 ~~k~v~~~ 483 (484)
T 3ifg_A 476 VIKYLCVA 483 (484)
T ss_dssp EEEEEEEE
T ss_pred ceEEEEEe
Confidence 99999764
|
| >3iwj_A Putative aminoaldehyde dehydrogenase; rossmann fold, dimer, betaine aldehyde dehydrogenase, NAD, oxidoreductase; HET: NAD; 2.15A {Pisum sativum} SCOP: c.82.1.0 PDB: 3iwk_A* 4a0m_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-92 Score=722.61 Aligned_cols=412 Identities=43% Similarity=0.761 Sum_probs=389.3
Q ss_pred CHHHHHHHHHhHHHHHHHHHHhcCCChHHHhhchHHHHHHHHHHHHHhhhhhcCccc-cc---CCCcccceeecCCceEE
Q 015042 1 MWKFADLIEEHVEELAALDALDAGKVYLRAKTAEIPGAAEFLRFFAGAADKIHGEVL-KM---SSELQGYTLREPVGVVG 76 (414)
Q Consensus 1 L~~~a~~l~~~~~~l~~~~~~etGk~~~e~~~~ei~~~~~~l~~~a~~~~~~~~~~~-~~---~~~~~~~~~~~P~Gvv~ 76 (414)
|+++++.|++|+++|++++++|+|||..++ ..|+..+++.+++++.+.+++.+... +. ..+...+++++|+|||+
T Consensus 78 L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea-~~ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~ 156 (503)
T 3iwj_A 78 LRAIAAKVTEKKPELAKLESIDCGKPLDEA-AWDIDDVAGCFEYYADLAEKLDARQKAPVSLPMDTFKSHVLREPIGVVG 156 (503)
T ss_dssp HHHHHHHHHHTHHHHHHHHHHHHCCCHHHH-HHHHHHHHHHHHHHHHHHHHHHHHTTEEECCSCTTEEEEEEEEECCEEE
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCCHHHH-HHHHHHHHHHHHHHHHHHHHhcCCccccccccCCCccceEEEcCCceEE
Confidence 578999999999999999999999999986 56999999999999998877654431 11 13456789999999999
Q ss_pred EEcCCccchHHHHHhHHHHHhhCCeEEeecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhhHHHhhhCCCccEEEE
Q 015042 77 HIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLTALYYAHLAKLAGIPDGVLNVVPGFGPTAGAAICSHMDIDYVCF 156 (414)
Q Consensus 77 ~i~p~n~P~~~~~~~~~~aLaaGN~vv~kps~~~~~~~~~l~~~l~~aG~p~g~v~~v~~~~~~~~~~l~~~~~v~~v~~ 156 (414)
+|+|||||+...++++++||++||+||+|||+.+|+++..+.+++.++|+|+|++|++++++.+.++.|+.||+||+|.|
T Consensus 157 ~I~PwN~P~~~~~~~~~~ALaaGN~VVlKps~~tp~t~~~l~~l~~~aGlP~gvv~vv~g~~~~~g~~L~~~~~v~~I~F 236 (503)
T 3iwj_A 157 LITPWNYPMLMATWKVAPALAAGCAAILKPSELASLTCLELGEICKEVGLPPGVLNILTGLGPEAGAPLATHPDVDKVAF 236 (503)
T ss_dssp EECCSSSHHHHHHHHHHHHHHTTCEEEEECCTTSCHHHHHHHHHHHHHTCCTTSEEECCSCHHHHTHHHHTCTTCCEEEE
T ss_pred EECCCchHHHHHHHHHHHHHhcCCeEEEECCCcchHHHHHHHHHHHHhCcCcCeEEEEeCCcHHHHHHHhhCCCccEEEE
Confidence 99999999999999999999999999999999999999999999999999999999999988789999999999999999
Q ss_pred eCCcHHHHHHHHHHHhcccceeEEEcCCCCCceEcCCCCHHHHHHHHHHHhhccCCCCcccCceEEEeCchHHHHHHHHH
Q 015042 157 TGSTDVGRLVMQAAAASNLKQVSLELGGKSPLLIFDDADLDTAADVALLGNLYNKGEICVASSRVFVQEGIYDKFEKKLL 236 (414)
Q Consensus 157 tGs~~~g~~i~~~~a~~~~~~~~~e~gg~~~~iV~~dadl~~aa~~i~~~~~~~~Gq~C~a~~~i~V~~~i~d~f~~~l~ 236 (414)
|||+.+|+.|++.++ ++++|+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|+
T Consensus 237 TGS~~~G~~i~~~aa-~~l~~v~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~ 315 (503)
T 3iwj_A 237 TGSSATGSKIMTAAA-QLVKPVSLELGGKSPLVVFEDVDLDKAAEWAIFGCFWTNGQICSATSRLILHESIATEFLNRIV 315 (503)
T ss_dssp ESCHHHHHHHHHHHG-GGTCCEEEECCCCEEEEECSSSCHHHHHHHHHHHHTGGGGCCTTCEEEEEEETTTHHHHHHHHH
T ss_pred ECcHHHHHHHHHHHh-cCCCCEEEECCCCCceEEcCCCCHHHHHHHHHHHHHhcCCCCcccCCeeEEcHHHHHHHHHHHH
Confidence 999999999999988 8999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhhcccCCCCCCCCcccccCCHHHHHHHHHHHHHHHHcCCEEEeCCcccC--CCCceeeeEEEeeCCCccccccccee
Q 015042 237 EKAKAWLVGDPFDPTVRQGPQISERHFDRILSYIEHGKREGATLLTGGKPIG--DKGYYIEPTIFTNVKEDMIIAKEEIF 314 (414)
Q Consensus 237 ~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~--~~g~~~~Ptvl~~~~~~~~~~~~E~f 314 (414)
++++++++|+|.++++++||+++..+++++.+++++++++|+++++||.... ..|+|++|||+.+++++|.+++||+|
T Consensus 316 ~~~~~~~~g~p~~~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~v~~gG~~~~~~~~g~~~~PTvl~~v~~~~~i~~eEiF 395 (503)
T 3iwj_A 316 KWIKNIKISDPLEEGCRLGPVVSEGQYEKILKFVSNAKSEGATILTGGSRPEHLKKGFFIEPTIITDVTTNMQIWREEVF 395 (503)
T ss_dssp HHHHTCCBSCTTSTTCCBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCSCCTTCCSSSCCCCEEEESCCTTSHHHHSCCC
T ss_pred HHHHhccCCCCCCCCCcccCccCHHHHHHHHHHHHHHHHCCCEEEecCCCCccCCCCceeCCeeeecCCCCchhhCceee
Confidence 9999999999999999999999999999999999999999999999998654 47999999999999999999999999
Q ss_pred cceEEEEeeCCHHHHHHHhhcCCCCceEEEecCCHHHHHHHHHhcceeEEEEcCcCCCCCCCCcccCCCCCCCccchHHH
Q 015042 315 GPVMALMKFKTVEEAIKSANNTQYGLAAGIVTKDLNVANTVSRSIRAGIIWINCYFGFSMDCPYGGYKMSGFGREYGLES 394 (414)
Q Consensus 315 gPvl~v~~~~~~~eai~~~n~~~~gl~~sv~s~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~p~gG~~~sG~g~~~g~~~ 394 (414)
|||++|++|+|+||||+++|+++|||++||||+|.+.++++++++++|+|+||++....+.+||||+|.||+|+++|.+|
T Consensus 396 GPVl~v~~~~~~deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~v~iN~~~~~~~~~PfGG~k~SG~G~~~G~~g 475 (503)
T 3iwj_A 396 GPVLCVKTFSTEEEAIDLANDTVYGLGAAVISNDLERCERVTKAFKAGIVWVNCSQPCFTQAPWGGVKRSGFGRELGEWG 475 (503)
T ss_dssp SSEEEEEEESSHHHHHHHHTCSSCCSEEEEECSCHHHHHHHHHHCCSSEEEESSSCCCCTTSCBCCSGGGEECCBSHHHH
T ss_pred CceEEEEEeCCHHHHHHHHhCCCCCcEEEEECCCHHHHHHHHHhCCcceEEEcCCCCCCCCCCcCCcCcccCCCcchHHH
Confidence 99999999999999999999999999999999999999999999999999999987778899999999999999999999
Q ss_pred HHhhheeeEEEeeCCCC--CCC
Q 015042 395 LYKYLQIKSVVTPIYNS--PWL 414 (414)
Q Consensus 395 ~~~~~~~k~i~~~~~~~--~~~ 414 (414)
+++|++.|+|+++.... .||
T Consensus 476 ~~~f~~~k~v~~~~~~~~~~~~ 497 (503)
T 3iwj_A 476 LDNYLSVKQVTQYISEEPWGWY 497 (503)
T ss_dssp HHTTEEEEEEEEECCSSCCCCS
T ss_pred HHHhhCeEEEEEeCCCCccccc
Confidence 99999999999887644 465
|
| >1bxs_A Aldehyde dehydrogenase; retinal, class 1, tetramer, NAD, cytosolic, oxidoreductase; HET: NAD; 2.35A {Ovis aries} SCOP: c.82.1.1 PDB: 1o9j_A* 1bi9_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.8e-92 Score=719.56 Aligned_cols=410 Identities=53% Similarity=0.935 Sum_probs=388.7
Q ss_pred CHHHHHHHHHhHHHHHHHHHHhcCCChHHHhhchHHHHHHHHHHHHHhhhhhcCcccccCCCcccceeecCCceEEEEcC
Q 015042 1 MWKFADLIEEHVEELAALDALDAGKVYLRAKTAEIPGAAEFLRFFAGAADKIHGEVLKMSSELQGYTLREPVGVVGHIIP 80 (414)
Q Consensus 1 L~~~a~~l~~~~~~l~~~~~~etGk~~~e~~~~ei~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p 80 (414)
|+++++.|++|+++|++++++|+|||..++...|+..+++.+++++.++++..+..++...+...+.+++|+|||++|+|
T Consensus 89 L~~~a~~l~~~~~ela~~~~~e~Gk~~~e~~~~ev~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~P~GVV~~I~P 168 (501)
T 1bxs_A 89 LNKLADLIERDRLLLATMEAMNGGKLFSNAYLMDLGGCIKTLRYCAGWADKIQGRTIPMDGNFFTYTRSEPVGVCGQIIP 168 (501)
T ss_dssp HHHHHHHHHHTHHHHHHHHHHHHTCCHHHHHHTHHHHHHHHHHHHHHHGGGCCEEEECCSSSEEEEEEEEECCEEEEECC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhCCeeeccCCcceeEEecCCceEEEECC
Confidence 57899999999999999999999999998766799999999999999988776654443344556899999999999999
Q ss_pred CccchHHHHHhHHHHHhhCCeEEeecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhhHHHhhhCCCccEEEEeCCc
Q 015042 81 WNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLTALYYAHLAKLAGIPDGVLNVVPGFGPTAGAAICSHMDIDYVCFTGST 160 (414)
Q Consensus 81 ~n~P~~~~~~~~~~aLaaGN~vv~kps~~~~~~~~~l~~~l~~aG~p~g~v~~v~~~~~~~~~~l~~~~~v~~v~~tGs~ 160 (414)
||||+...++++++||++||+||+|||+.+|+++..+++++.++|+|+|++|++++.+.+.++.|+.||+||+|.||||+
T Consensus 169 wN~P~~~~~~~~a~ALaaGN~VVlKps~~tp~t~~~l~~l~~~aGlP~gv~~vv~g~~~~~g~~L~~~~~v~~I~FTGS~ 248 (501)
T 1bxs_A 169 WNFPLLMFLWKIGPALSCGNTVVVKPAEQTPLTALHMGSLIKEAGFPPGVVNIVPGYGPTAGAAISSHMDVDKVAFTGST 248 (501)
T ss_dssp SSSHHHHHHHHHHHHHHTTCEEEEECCTTCCHHHHHHHHHHHHHTCCTTSEEECCSCTTTHHHHHHTCTTCSEEEEESCH
T ss_pred CcchHHHHHHHHHHHHHcCCeeeccCCCccHHHHHHHHHHHHHhCCCcceEEEEecCchHHHHHHHhCCCcCEEEEECCH
Confidence 99999999999999999999999999999999999999999999999999999999777899999999999999999999
Q ss_pred HHHHHHHHHHHhcccceeEEEcCCCCCceEcCCCCHHHHHHHHHHHhhccCCCCcccCceEEEeCchHHHHHHHHHHHHh
Q 015042 161 DVGRLVMQAAAASNLKQVSLELGGKSPLLIFDDADLDTAADVALLGNLYNKGEICVASSRVFVQEGIYDKFEKKLLEKAK 240 (414)
Q Consensus 161 ~~g~~i~~~~a~~~~~~~~~e~gg~~~~iV~~dadl~~aa~~i~~~~~~~~Gq~C~a~~~i~V~~~i~d~f~~~l~~~~~ 240 (414)
.+|+.|++.+++++++|+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++
T Consensus 249 ~~G~~i~~~aa~~~l~~v~lELGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~ 328 (501)
T 1bxs_A 249 EVGKLIKEAAGKSNLKRVSLELGGKSPCIVFADADLDNAVEFAHQGVFYHQGQCCIAASRLFVEESIYDEFVRRSVERAK 328 (501)
T ss_dssp HHHHHHHHHHHHTTCCEEEEECCCCCEEEECTTSCHHHHHHHHHHHHHTTTTCCTTCCCEEEEEHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHhhhccCCcEEEecCCcCeEEECCCCCHHHHHHHHHHHHHhcCCCCCCCCCEEEEchhHHHHHHHHHHHHHH
Confidence 99999999887578999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hcccCCCCCCCCcccccCCHHHHHHHHHHHHHHHHcCCEEEeCCcccCCCCceeeeEEEeeCCCcccccccceecceEEE
Q 015042 241 AWLVGDPFDPTVRQGPQISERHFDRILSYIEHGKREGATLLTGGKPIGDKGYYIEPTIFTNVKEDMIIAKEEIFGPVMAL 320 (414)
Q Consensus 241 ~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v 320 (414)
++++|+|.|+++++||+++..+++++.+++++++++|+++++||......|+|++|||+.+++++|.+++||+||||++|
T Consensus 329 ~~~~G~p~~~~~~~Gpli~~~~~~rv~~~i~~a~~~Ga~~~~gG~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v 408 (501)
T 1bxs_A 329 KYVLGNPLTPGVSQGPQIDKEQYEKILDLIESGKKEGAKLECGGGPWGNKGYFIQPTVFSDVTDDMRIAKEEIFGPVQQI 408 (501)
T ss_dssp CCCBSCTTSTTCCBCCCSCHHHHHHHHHHHHHHHHTTCEECSCCSEECSSSCEECCEEEESCCTTSHHHHSCCCSSEEEE
T ss_pred hcCCCCCcccCCccCCCcCHHHHHHHHHHHHHHHhCCCEEEeCCccCCCCCCeeCCEEEecCCCCCHHHhcccccceEEE
Confidence 99999999999999999999999999999999999999999999764346999999999999999999999999999999
Q ss_pred EeeCCHHHHHHHhhcCCCCceEEEecCCHHHHHHHHHhcceeEEEEcCcCCCCCCCCcccCCCCCCCccchHHHHHhhhe
Q 015042 321 MKFKTVEEAIKSANNTQYGLAAGIVTKDLNVANTVSRSIRAGIIWINCYFGFSMDCPYGGYKMSGFGREYGLESLYKYLQ 400 (414)
Q Consensus 321 ~~~~~~~eai~~~n~~~~gl~~sv~s~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~p~gG~~~sG~g~~~g~~~~~~~~~ 400 (414)
++|+|+||||+++|+++|||++||||+|.+.++++++++++|+|+||++....+.+||||+|.||+|+++|++|+++|++
T Consensus 409 ~~~~~~deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~V~iN~~~~~~~~~pfGG~k~SG~G~~~G~~~l~~f~~ 488 (501)
T 1bxs_A 409 MKFKSLDDVIKRANNTFYGLSAGIFTNDIDKAITVSSALQSGTVWVNCYSVVSAQCPFGGFKMSGNGRELGEYGFHEYTE 488 (501)
T ss_dssp EEECCHHHHHHHHHCSSCCSEEEEECSBHHHHHHHHHHSCCSEEEESCCCCCCTTSCBCCSGGGEESCBSHHHHHHTTEE
T ss_pred EEeCCHHHHHHHHhcCCCCeeEEEEcCCHHHHHHHHHhcCeeEEEECCCCCCCCCCCCCCcCcCCcCccchHHHHHHhhC
Confidence 99999999999999999999999999999999999999999999999987777889999999999999999999999999
Q ss_pred eeEEEeeCCC
Q 015042 401 IKSVVTPIYN 410 (414)
Q Consensus 401 ~k~i~~~~~~ 410 (414)
.|+|+.+...
T Consensus 489 ~K~v~~~~~~ 498 (501)
T 1bxs_A 489 VKTVTIKISQ 498 (501)
T ss_dssp EEEEEEECSC
T ss_pred eeEEEEccCC
Confidence 9999887643
|
| >2o2p_A Formyltetrahydrofolate dehydrogenase; aldehyde dehydrogenase, FDH, oxidoreductase; 1.70A {Rattus norvegicus} PDB: 2o2q_A* 2o2r_A* 3rho_A* 3rhm_A* 3rhj_A* 3rhq_A* 3rhp_A* 3rhr_A* 3rhl_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-92 Score=722.51 Aligned_cols=407 Identities=43% Similarity=0.805 Sum_probs=385.0
Q ss_pred CHHHHHHHHHhHHHHHHHHHHhcCCChHHHhhchHHHHHHHHHHHHHhhhhhcCcccccC----CCcccceeecCCceEE
Q 015042 1 MWKFADLIEEHVEELAALDALDAGKVYLRAKTAEIPGAAEFLRFFAGAADKIHGEVLKMS----SELQGYTLREPVGVVG 76 (414)
Q Consensus 1 L~~~a~~l~~~~~~l~~~~~~etGk~~~e~~~~ei~~~~~~l~~~a~~~~~~~~~~~~~~----~~~~~~~~~~P~Gvv~ 76 (414)
|+++++.|++|+++|++++++|+|||..++...|+..+++.+++++.++++..+..++.. .+...+.+++|+|||+
T Consensus 104 L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea~~~Ev~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~~~~~P~GVV~ 183 (517)
T 2o2p_A 104 LYRLADVMEQHQEELATIEALDAGAVYTLALKTHVGMSIQTFRYFAGWCDKIQGATIPINQARPNRNLTLTKKEPVGVCG 183 (517)
T ss_dssp HHHHHHHHHHTHHHHHHHHHHHHCCCHHHHHHTTTHHHHHHHHHHHHHGGGCCEEEECCCCCTTSCEEEEEEEEECCEEE
T ss_pred HHHHHHHHHHhHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCccccccccCCCCceEEEEecCCccEE
Confidence 578999999999999999999999999986547999999999999999887666544431 2225689999999999
Q ss_pred EEcCCccchHHHHHhHHHHHhhCCeEEeecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhhHHHhhhCCCccEEEE
Q 015042 77 HIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLTALYYAHLAKLAGIPDGVLNVVPGFGPTAGAAICSHMDIDYVCF 156 (414)
Q Consensus 77 ~i~p~n~P~~~~~~~~~~aLaaGN~vv~kps~~~~~~~~~l~~~l~~aG~p~g~v~~v~~~~~~~~~~l~~~~~v~~v~~ 156 (414)
+|+|||||+...++++++||++||+||+|||+.+|+++..+++++.++|+|+|++|++++.+.++++.|+.||+||+|.|
T Consensus 184 ~I~PwN~P~~~~~~~~a~ALaaGNtVVlKps~~tp~ta~~l~~l~~eaGlP~gvv~vv~g~g~~~g~~L~~~~~v~~V~F 263 (517)
T 2o2p_A 184 IVIPWNYPLMMLSWKTAACLAAGNTVVIKPAQVTPLTALKFAELTLKAGIPKGVVNILPGSGSLVGQRLSDHPDVRKIGF 263 (517)
T ss_dssp EECCSSSHHHHHHHHHHHHHHTTCEEEEECCTTCCHHHHHHHHHHHHTTCCTTSEEECCSCHHHHHHHHHHCTTCCEEEE
T ss_pred EECCCcchHHHHHHHHHHHHHcCCEEEEECCCccHHHHHHHHHHHHHhCCCcCeEEEEeCCCHHHHHHHHhCCCCCEEEE
Confidence 99999999999999999999999999999999999999999999999999999999999977788999999999999999
Q ss_pred eCCcHHHHHHHHHHHhcccceeEEEcCCCCCceEcCCCCHHHHHHHHHHHhhccCCCCcccCceEEEeCchHHHHHHHHH
Q 015042 157 TGSTDVGRLVMQAAAASNLKQVSLELGGKSPLLIFDDADLDTAADVALLGNLYNKGEICVASSRVFVQEGIYDKFEKKLL 236 (414)
Q Consensus 157 tGs~~~g~~i~~~~a~~~~~~~~~e~gg~~~~iV~~dadl~~aa~~i~~~~~~~~Gq~C~a~~~i~V~~~i~d~f~~~l~ 236 (414)
|||+.+|+.|++.++.++++|+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|+
T Consensus 264 TGS~~~G~~I~~~aa~~~lk~v~lELGGk~p~IV~~dADl~~Aa~~i~~~~f~n~GQ~C~a~~rv~V~~~i~d~f~~~l~ 343 (517)
T 2o2p_A 264 TGSTEVGKHIMKSCALSNVKKVSLELGGKSPLIIFADCDLNKAVQMGMSSVFFNKGENCIAAGRLFVEESIHNQFVQKVV 343 (517)
T ss_dssp ESCHHHHHHHHHHHHHHTCCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCCTTCEEEEEEEHHHHHHHHHHHH
T ss_pred ECCHHHHHHHHHHhHHhcCCeEEEECCCcCeEEECCCCCHHHHHHHHHHHHHhcCCCCCcCCeEEEEeHHHHHHHHHHHH
Confidence 99999999999987646789999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhhcccCCCCCCCCcccccCCHHHHHHHHHHHHHHHHcCCEEEeCCcccCCCCceeeeEEEeeCCCcccccccceecc
Q 015042 237 EKAKAWLVGDPFDPTVRQGPQISERHFDRILSYIEHGKREGATLLTGGKPIGDKGYYIEPTIFTNVKEDMIIAKEEIFGP 316 (414)
Q Consensus 237 ~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgP 316 (414)
+.++++++|+|+++++++||+++..+++++.+++++++++|+++++||......|+|++|||+.+++++|++++||+|||
T Consensus 344 ~~~~~~~vGdp~~~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~~~~gG~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGP 423 (517)
T 2o2p_A 344 EEVEKMKIGNPLERDTNHGPQNHEAHLRKLVEYCQRGVKEGATLVCGGNQVPRPGFFFQPTVFTDVEDHMYIAKEESFGP 423 (517)
T ss_dssp HHHTTCCBSCTTSTTCCBCCCSSHHHHHHHHHHHHHHHHTTCEEEECCSBCSSSSCCBCCEEEESCCTTSGGGTSCCCSS
T ss_pred HHHHhcCCCCCCCCCCccCCCcCHHHHHHHHHHHHHHHHCCCEEEeccccCCCCCCeECCEEEeCCCCCChhhhcccccc
Confidence 99999999999999999999999999999999999999999999999986544699999999999999999999999999
Q ss_pred eEEEEeeCC--HHHHHHHhhcCCCCceEEEecCCHHHHHHHHHhcceeEEEEcCcCCCCCCCCcccCCCCCCCccchHHH
Q 015042 317 VMALMKFKT--VEEAIKSANNTQYGLAAGIVTKDLNVANTVSRSIRAGIIWINCYFGFSMDCPYGGYKMSGFGREYGLES 394 (414)
Q Consensus 317 vl~v~~~~~--~~eai~~~n~~~~gl~~sv~s~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~p~gG~~~sG~g~~~g~~~ 394 (414)
|++|++|+| +||||+++|+++|||++||||+|.+.++++++++++|+|+||++....+.+||||+|.||+|+++|.+|
T Consensus 424 Vl~v~~~~~~~~deAi~~aN~~~~GL~a~v~t~d~~~a~~~~~~l~aG~V~iN~~~~~~~~~PfGG~k~SG~Gr~~G~~~ 503 (517)
T 2o2p_A 424 IMIISRFADGDVDAVLSRANATEFGLASGVFTRDINKALYVSDKLQAGTVFINTYNKTDVAAPFGGFKQSGFGKDLGEAA 503 (517)
T ss_dssp EEEEEEECTTCSHHHHHHHTCSSCCSCCEEECSBHHHHHHHHHHCCSSEEEESCSSCCCTTSCBCCCGGGEECCBSHHHH
T ss_pred EEEEEEcCCCCHHHHHHHHhcCCCCceEEEeCCCHHHHHHHHHhcCEeEEEECCCCCCCCCCCcCCcCcCCcCccChHHH
Confidence 999999999 999999999999999999999999999999999999999999987777899999999999999999999
Q ss_pred HHhhheeeEEEee
Q 015042 395 LYKYLQIKSVVTP 407 (414)
Q Consensus 395 ~~~~~~~k~i~~~ 407 (414)
+++|+++|+|+++
T Consensus 504 l~~~~~~k~v~~~ 516 (517)
T 2o2p_A 504 LNEYLRIKTVTFE 516 (517)
T ss_dssp HHTTEEEEEEEEE
T ss_pred HHHhCCceEEEee
Confidence 9999999999875
|
| >3ek1_A Aldehyde dehydrogenase; ssgcid, oxidoreductase, structural genomics; HET: MES; 2.10A {Brucella melitensis biovar ABORTUS2308} | Back alignment and structure |
|---|
Probab=100.00 E-value=8.9e-93 Score=721.63 Aligned_cols=405 Identities=42% Similarity=0.687 Sum_probs=386.6
Q ss_pred CHHHHHHHHHhHHHHHHHHHHhcCCChHHHhhchHHHHHHHHHHHHHhhhhhcCcccccC-CCcccceeecCCceEEEEc
Q 015042 1 MWKFADLIEEHVEELAALDALDAGKVYLRAKTAEIPGAAEFLRFFAGAADKIHGEVLKMS-SELQGYTLREPVGVVGHII 79 (414)
Q Consensus 1 L~~~a~~l~~~~~~l~~~~~~etGk~~~e~~~~ei~~~~~~l~~~a~~~~~~~~~~~~~~-~~~~~~~~~~P~Gvv~~i~ 79 (414)
|+++++.|++|+++|++++++|+|||..++ ..|+..+++.+++++.+.++..+...+.. .+...+.+++|+|||++|+
T Consensus 98 L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea-~~ev~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~~P~GVV~~I~ 176 (504)
T 3ek1_A 98 LRKWFDLIIANADDIALIMTSEQGKPLAEA-RGEVLYAASFIEWFAEEAKRVYGDTIPAPQNGQRLTVIRQPVGVTAAIT 176 (504)
T ss_dssp HHHHHHHHHHTHHHHHHHHHHHHCCCHHHH-HHHHHHHHHHHHHHHHHHTTCCEEEECCSSTTEEEEEEEEECCEEEEEC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCCHHHH-HHHHHHHHHHHHHHHHHHHHhcCcccccccccccceeeccCceEEEEEC
Confidence 578999999999999999999999999986 45999999999999999877655544432 3566889999999999999
Q ss_pred CCccchHHHHHhHHHHHhhCCeEEeecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhhHHHhhhCCCccEEEEeCC
Q 015042 80 PWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLTALYYAHLAKLAGIPDGVLNVVPGFGPTAGAAICSHMDIDYVCFTGS 159 (414)
Q Consensus 80 p~n~P~~~~~~~~~~aLaaGN~vv~kps~~~~~~~~~l~~~l~~aG~p~g~v~~v~~~~~~~~~~l~~~~~v~~v~~tGs 159 (414)
|||||+...++++++||++||+||+|||+.+|+++..+++++.++|+|+|++|++++.+.++++.|+.||+||+|.||||
T Consensus 177 PwN~P~~~~~~~~a~ALaaGN~VVlKPs~~tp~t~~~l~~l~~eaGlP~gv~~vv~g~~~~~g~~L~~~p~v~~V~FTGS 256 (504)
T 3ek1_A 177 PWNFPAAMITRKAAPALAAGCTMIVRPADLTPLTALALGVLAEKAGIPAGVLQIVTGKAREIGAELTSNDTVRKLSFTGS 256 (504)
T ss_dssp CSSSTTHHHHHHHHHHHHHTCEEEEECCTTSCHHHHHHHHHHHHTTCCTTTEEECCSCHHHHHHHHHHCTTCCEEEEESC
T ss_pred CCcchHHHHHHHHHHHHHcCCEEEEECCCcChHHHHHHHHHHHHhCCCcccEEEEeCCCHHHHHHHHhCCCcCEEEEECC
Confidence 99999999999999999999999999999999999999999999999999999999878889999999999999999999
Q ss_pred cHHHHHHHHHHHhcccceeEEEcCCCCCceEcCCCCHHHHHHHHHHHhhccCCCCcccCceEEEeCchHHHHHHHHHHHH
Q 015042 160 TDVGRLVMQAAAASNLKQVSLELGGKSPLLIFDDADLDTAADVALLGNLYNKGEICVASSRVFVQEGIYDKFEKKLLEKA 239 (414)
Q Consensus 160 ~~~g~~i~~~~a~~~~~~~~~e~gg~~~~iV~~dadl~~aa~~i~~~~~~~~Gq~C~a~~~i~V~~~i~d~f~~~l~~~~ 239 (414)
+.+|+.|++.++ ++++|+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|++++
T Consensus 257 ~~~G~~i~~~aa-~~lk~v~lELGGk~p~IV~~dADl~~Aa~~i~~~~f~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~ 335 (504)
T 3ek1_A 257 TEVGRLLMAQCA-PTIKRISLELGGNAPFIVFDDADLDAAVDGAMVSKYRNAGQTCVCANRIYVQRGVYDKFAEKLAAKV 335 (504)
T ss_dssp HHHHHHHHHHHG-GGTCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCSTTSEEEEEEEHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhhh-hhcCCeEecCCCCCeeEEcCCCCHHHHHHHHHHHHHhcCCCCCCCCCEEEEehhHHHHHHHHHHHHH
Confidence 999999999988 8999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhcccCCCCCCCCcccccCCHHHHHHHHHHHHHHHHcCCEEEeCCcccCCCCceeeeEEEeeCCCcccccccceecceEE
Q 015042 240 KAWLVGDPFDPTVRQGPQISERHFDRILSYIEHGKREGATLLTGGKPIGDKGYYIEPTIFTNVKEDMIIAKEEIFGPVMA 319 (414)
Q Consensus 240 ~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~ 319 (414)
+++++|+|.++++++||+++..+++++.+++++++++|+++++||.. ..|+|++|||+.+++++|.+++||+||||++
T Consensus 336 ~~~~~G~p~~~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~v~~gG~~--~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~ 413 (504)
T 3ek1_A 336 KELKVGNGTEPGVVIGPMIEEKAITKVKAHIEDAVSKGAKLITGGKE--LGGLFFEPGILTGVTSDMLVAKEETFGPLAP 413 (504)
T ss_dssp HTCCBSCTTSTTCCBCCCSSHHHHHHHHHHHHHHHHTTCEEEECCCE--EETTEECCEEEEEECTTSGGGTSCCCSSEEE
T ss_pred hhcccCCCccccCccccccCHHHHHHHHHHHHHHHHCCCEEEeCCcc--CCCceECCeEEecCCCcChhhcccccCcEEE
Confidence 99999999999999999999999999999999999999999999976 3689999999999999999999999999999
Q ss_pred EEeeCCHHHHHHHhhcCCCCceEEEecCCHHHHHHHHHhcceeEEEEcCcCCCCCCCCcccCCCCCCCccchHHHHHhhh
Q 015042 320 LMKFKTVEEAIKSANNTQYGLAAGIVTKDLNVANTVSRSIRAGIIWINCYFGFSMDCPYGGYKMSGFGREYGLESLYKYL 399 (414)
Q Consensus 320 v~~~~~~~eai~~~n~~~~gl~~sv~s~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~p~gG~~~sG~g~~~g~~~~~~~~ 399 (414)
|++|+|+||||+++|+++|||++||||+|.+.++++++++++|+|+||++....+.+||||+|.||+|+++|++|+++||
T Consensus 414 v~~~~~~deAi~~aN~~~~GL~a~v~t~d~~~a~~~a~~l~aG~V~vN~~~~~~~~~PfGG~k~SG~Gr~~G~~gl~~~t 493 (504)
T 3ek1_A 414 LFAFDTEEEVIAQANDTIFGLAAYFYTENFSRAIRVSEALEYGMVGHNTGLISNEVAPFGGVKQSGLGREGSKYGIEEYL 493 (504)
T ss_dssp EEEECCHHHHHHHHHCSSCCSEEEEECCBHHHHHHHHHHSCCSEEEESCSCCCCSSSCBCCSGGGEESCBSTTTSGGGGE
T ss_pred EEEeCCHHHHHHHHhCCCCCeEEEEEcCCHHHHHHHHHhCCcCeEEECCCCCCCCCCCcCCcCcCcCCCCCcHHHHHHhh
Confidence 99999999999999999999999999999999999999999999999998877789999999999999999999999999
Q ss_pred eeeEEEeeCC
Q 015042 400 QIKSVVTPIY 409 (414)
Q Consensus 400 ~~k~i~~~~~ 409 (414)
+.|+|+++.+
T Consensus 494 ~~K~v~~~~g 503 (504)
T 3ek1_A 494 ETKYICSAYK 503 (504)
T ss_dssp EEEEEEEECC
T ss_pred ceEEEEEecC
Confidence 9999988764
|
| >1o04_A Aldehyde dehydrogenase, mitochondrial precursor; ALDH, NAD, NADH, isomerization, oxidoreductase; HET: NAD; 1.42A {Homo sapiens} SCOP: c.82.1.1 PDB: 1nzw_A* 3inl_A* 3n80_A* 1nzz_A* 1o00_A* 1nzx_A* 1o01_A* 1o05_A 1of7_A* 1o02_A* 3inj_A* 3sz9_A* 1zum_A 2onm_A* 2onp_A* 2onn_A 2ono_A* 3n81_A 3n82_A* 3n83_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=1.6e-92 Score=719.72 Aligned_cols=409 Identities=52% Similarity=0.888 Sum_probs=387.8
Q ss_pred CHHHHHHHHHhHHHHHHHHHHhcCCChHHHhhchHHHHHHHHHHHHHhhhhhcCcccccCCCcccceeecCCceEEEEcC
Q 015042 1 MWKFADLIEEHVEELAALDALDAGKVYLRAKTAEIPGAAEFLRFFAGAADKIHGEVLKMSSELQGYTLREPVGVVGHIIP 80 (414)
Q Consensus 1 L~~~a~~l~~~~~~l~~~~~~etGk~~~e~~~~ei~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p 80 (414)
|+++++.|++|+++|++++++|+|||..++...|+..+++.+++++.++++..+..++...+...+++++|+|||++|+|
T Consensus 88 L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea~~~ev~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~P~GVv~~I~P 167 (500)
T 1o04_A 88 LNRLADLIERDRTYLAALETLDNGKPYVISYLVDLDMVLKCLRYYAGWADKYHGKTIPIDGDFFSYTRHEPVGVCGQIIP 167 (500)
T ss_dssp HHHHHHHHHHTHHHHHHHHHHHHCCCHHHHHHTHHHHHHHHHHHHHHHTTTCCEEEECCSSSEEEEEEEEECCEEEEECC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhCcceecCCCceEEEEEecCCcEEEECC
Confidence 57899999999999999999999999998766799999999999999887766554443334456899999999999999
Q ss_pred CccchHHHHHhHHHHHhhCCeEEeecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhhHHHhhhCCCccEEEEeCCc
Q 015042 81 WNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLTALYYAHLAKLAGIPDGVLNVVPGFGPTAGAAICSHMDIDYVCFTGST 160 (414)
Q Consensus 81 ~n~P~~~~~~~~~~aLaaGN~vv~kps~~~~~~~~~l~~~l~~aG~p~g~v~~v~~~~~~~~~~l~~~~~v~~v~~tGs~ 160 (414)
||||+...++++++||++||+||+|||+.+|+++..+++++.++|+|+|++|++++.+.++++.|+.||+||+|.||||+
T Consensus 168 wN~P~~~~~~~~a~ALaaGN~VVlKps~~tp~t~~~l~~l~~~aGlP~gvv~vv~g~~~~~g~~L~~~p~v~~I~FTGS~ 247 (500)
T 1o04_A 168 WNFPLLMQAWKLGPALATGNVVVMKVAEQTPLTALYVANLIKEAGFPPGVVNIVPGFGPTAGAAIASHEDVDKVAFTGST 247 (500)
T ss_dssp SSSHHHHHHHHHHHHHHTTCEEEEECCTTSCHHHHHHHHHHHHHTCCTTSEEECCBCTTTHHHHHHTCTTCCEEEEESCH
T ss_pred CCchHHHHHHHHHHHHHcCCEEEEECCccChHHHHHHHHHHHHhCCCcCeEEEEecCcHHHHHHHHhCCCcCEEEEECCH
Confidence 99999999999999999999999999999999999999999999999999999999777899999999999999999999
Q ss_pred HHHHHHHHHHHhcccceeEEEcCCCCCceEcCCCCHHHHHHHHHHHhhccCCCCcccCceEEEeCchHHHHHHHHHHHHh
Q 015042 161 DVGRLVMQAAAASNLKQVSLELGGKSPLLIFDDADLDTAADVALLGNLYNKGEICVASSRVFVQEGIYDKFEKKLLEKAK 240 (414)
Q Consensus 161 ~~g~~i~~~~a~~~~~~~~~e~gg~~~~iV~~dadl~~aa~~i~~~~~~~~Gq~C~a~~~i~V~~~i~d~f~~~l~~~~~ 240 (414)
.+|+.|++.+++++++|+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|++.++
T Consensus 248 ~~G~~i~~~aa~~~l~pv~lELGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~ 327 (500)
T 1o04_A 248 EIGRVIQVAAGSSNLKRVTLELGGKSPNIIMSDADMDWAVEQAHFALFFNQGQCSCAGSRTFVQEDIYDEFVERSVARAK 327 (500)
T ss_dssp HHHHHHHHHHHHTTCCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCCTTCEEEEEEEHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhhhhhcCceEEEEcCCcCeEEECCCCCHHHHHHHHHHHHhccCCCCCCCCCEEEEehhHHHHHHHHHHHHHH
Confidence 99999999887578999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hcccCCCCCCCCcccccCCHHHHHHHHHHHHHHHHcCCEEEeCCcccCCCCceeeeEEEeeCCCcccccccceecceEEE
Q 015042 241 AWLVGDPFDPTVRQGPQISERHFDRILSYIEHGKREGATLLTGGKPIGDKGYYIEPTIFTNVKEDMIIAKEEIFGPVMAL 320 (414)
Q Consensus 241 ~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v 320 (414)
++++|+|.++++++||+++..+++++.+++++++++|+++++||......|+|++|||+.+++++|.+++||+||||++|
T Consensus 328 ~~~~G~p~~~~~~~Gpli~~~~~~rv~~~i~~a~~~Ga~~~~gG~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v 407 (500)
T 1o04_A 328 SRVVGNPFDSKTEQGPQVDETQFKKILGYINTGKQEGAKLLCGGGIAADRGYFIQPTVFGDVQDGMTIAKEEIFGPVMQI 407 (500)
T ss_dssp HCCBCCTTSTTCSBCCCSSHHHHHHHHHHHHHHHHTTCEEEECCSBCCSSSSCBCCEEEESCCTTSHHHHSCCCSSEEEE
T ss_pred hCcCCCcccccCccCcccCHHHHHHHHHHHHHHHhCCCEEEeCCccCCCCCCeeCCEEEeCCCCCChhhhCcccceEEEE
Confidence 99999999999999999999999999999999999999999999764346999999999999999999999999999999
Q ss_pred EeeCCHHHHHHHhhcCCCCceEEEecCCHHHHHHHHHhcceeEEEEcCcCCCCCCCCcccCCCCCCCccchHHHHHhhhe
Q 015042 321 MKFKTVEEAIKSANNTQYGLAAGIVTKDLNVANTVSRSIRAGIIWINCYFGFSMDCPYGGYKMSGFGREYGLESLYKYLQ 400 (414)
Q Consensus 321 ~~~~~~~eai~~~n~~~~gl~~sv~s~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~p~gG~~~sG~g~~~g~~~~~~~~~ 400 (414)
++|+|+||||+++|+++|||++||||+|.+.++++++++++|+|+||++....+.+||||+|.||+|+++|++|+++|++
T Consensus 408 ~~~~~~deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~V~iN~~~~~~~~~PfGG~k~SG~G~~~G~~gl~~f~~ 487 (500)
T 1o04_A 408 LKFKTIEEVVGRANNSTYGLAAAVFTKDLDKANYLSQALQAGTVWVNCYDVFGAQSPFGGYKMSGSGRELGEYGLQAYTE 487 (500)
T ss_dssp EEECCHHHHHHHHHCSSCCSEEEEECSBHHHHHHHHHHCCSSEEEESCSSCCCTTSCBCCSGGGEESCBSTGGGGGGGEE
T ss_pred EeeCCHHHHHHHHhcCCCCceEEEECCCHHHHHHHHHhCCeeEEEECCCCCCCCCCCCCCcCCCCCCccchHHHHHHhcc
Confidence 99999999999999999999999999999999999999999999999987777889999999999999999999999999
Q ss_pred eeEEEeeCC
Q 015042 401 IKSVVTPIY 409 (414)
Q Consensus 401 ~k~i~~~~~ 409 (414)
.|+|+.+..
T Consensus 488 ~K~v~~~~~ 496 (500)
T 1o04_A 488 VKTVTVKVP 496 (500)
T ss_dssp EEEEEEECS
T ss_pred eEEEEEecC
Confidence 999988753
|
| >4f3x_A Putative aldehyde dehydrogenase; structural genomics, protein structure initiative, nysgrc, P biology; HET: MSE NAD; 2.01A {Sinorhizobium meliloti} PDB: 4dal_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-92 Score=719.97 Aligned_cols=406 Identities=35% Similarity=0.638 Sum_probs=388.3
Q ss_pred CHHHHHHHHHhHHHHHHHHHHhcCCChHHHhhchHHHHHHHHHHHHHhhhhhcCccccc-CCCcccceeecCCceEEEEc
Q 015042 1 MWKFADLIEEHVEELAALDALDAGKVYLRAKTAEIPGAAEFLRFFAGAADKIHGEVLKM-SSELQGYTLREPVGVVGHII 79 (414)
Q Consensus 1 L~~~a~~l~~~~~~l~~~~~~etGk~~~e~~~~ei~~~~~~l~~~a~~~~~~~~~~~~~-~~~~~~~~~~~P~Gvv~~i~ 79 (414)
|+++++.|++|+++|++++++|+|||..++...|+..+++.+++++.++++..+...+. ..+...+++++|+|||++|+
T Consensus 90 L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea~~~ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~ 169 (498)
T 4f3x_A 90 LLKIADAIEKEADEFAALEALNCGKPINAVKNDELPAIIDCWRFFAGAVRNLHAPAAGEYLPGHTSMIRRDPIGIVGSIA 169 (498)
T ss_dssp HHHHHHHHHHTHHHHHHHHHHHHCCCHHHHHHTHHHHHHHHHHHHHHHTTCCEEECBEEEETTEEEEEEEEECCEEEEEC
T ss_pred HHHHHHHHHHhHHHHHHHHHHHhCCCHHHHhHHHHHHHHHHHHHHHHHHHHhcCccccCCcccccceEEEcCcceEEEEC
Confidence 57899999999999999999999999998746799999999999999988766554432 24567889999999999999
Q ss_pred CCccchHHHHHhHHHHHhhCCeEEeecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhhHHHhhhCCCccEEEEeCC
Q 015042 80 PWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLTALYYAHLAKLAGIPDGVLNVVPGFGPTAGAAICSHMDIDYVCFTGS 159 (414)
Q Consensus 80 p~n~P~~~~~~~~~~aLaaGN~vv~kps~~~~~~~~~l~~~l~~aG~p~g~v~~v~~~~~~~~~~l~~~~~v~~v~~tGs 159 (414)
|||||+...++++++||++||+||+|||+.+|+++..+++++.++ +|+|++|++++++.++++.|+.||+||+|.||||
T Consensus 170 PwN~P~~~~~~~~a~ALaaGNtVVlKPs~~tp~t~~~l~~l~~ea-lP~gv~nvv~g~~~~~g~~L~~~p~v~~V~FTGS 248 (498)
T 4f3x_A 170 PWNYPLMMMAWKLAPAIGGGNTVVFKPSEQTPLTALKLARLIADI-LPEGVVNVITGRGETVGNALINHPKVGMVSITGD 248 (498)
T ss_dssp CSSSHHHHHHHHHHHHHHTTCEEEEECCTTCCHHHHHHHHHHHTT-SCTTSEEECCCCTTTHHHHHHTCTTCCEEEEESC
T ss_pred CCchHHHHHHHHHHHHHHcCCeEEEECCcccHHHHHHHHHHHHHh-CCcCeEEEEeCCchHHHHHHHhCCCcCEEEEECC
Confidence 999999999999999999999999999999999999999999999 9999999999988889999999999999999999
Q ss_pred cHHHHHHHHHHHhcccceeEEEcCCCCCceEcCCCCHHHHHHHHHHHhhccCCCCcccCceEEEeCchHHHHHHHHHHHH
Q 015042 160 TDVGRLVMQAAAASNLKQVSLELGGKSPLLIFDDADLDTAADVALLGNLYNKGEICVASSRVFVQEGIYDKFEKKLLEKA 239 (414)
Q Consensus 160 ~~~g~~i~~~~a~~~~~~~~~e~gg~~~~iV~~dadl~~aa~~i~~~~~~~~Gq~C~a~~~i~V~~~i~d~f~~~l~~~~ 239 (414)
+.+|+.|++.++ +++||+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|++++
T Consensus 249 ~~~G~~i~~~aa-~~~k~v~lElGGk~p~IV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~ 327 (498)
T 4f3x_A 249 IATGKKVLAAAA-KTVKRTHLELGGKAPVIVYGDADLEAVVNGIRTFGYYNAGQDCTAACRIYAEAGIYEKLVADLTSAV 327 (498)
T ss_dssp HHHHHHHHHHHH-TTTCEEEEECCCCEEEEECTTSCHHHHHHHHHHHTTGGGGCSTTCEEEEEEETTTHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH-hhCCceeecCCCCCcEEECCCCCHHHHHHHHHHHHHhcCCCCccCCceEEecHHHHHHHHHHHHHHH
Confidence 999999999998 8999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhcccCCCCCCCCcccccCCHHHHHHHHHHHHHHHHcCC-EEEeCCcccCCCCceeeeEEEeeCCCcccccccceecceE
Q 015042 240 KAWLVGDPFDPTVRQGPQISERHFDRILSYIEHGKREGA-TLLTGGKPIGDKGYYIEPTIFTNVKEDMIIAKEEIFGPVM 318 (414)
Q Consensus 240 ~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ga-~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl 318 (414)
+++++|+|.|+++++||+++..+++++.+++++++++|+ ++++||...+..|+|++|||+.+++++|.+++||+||||+
T Consensus 328 ~~~~vG~p~d~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~~v~~gG~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl 407 (498)
T 4f3x_A 328 STIRYNLDDDTENEIGPLISRRQRDRVASFVERAADQKHIEITTGGRTGSDEGFFFQPTVVAGATQEDEIVRREVFGPVV 407 (498)
T ss_dssp TTCCCSCSSGGGCSSCCCSCHHHHHHHHHHHHHHHHSTTCEEEECCSBCCSSSCCBCCEEEESCCTTSHHHHSCCCSSEE
T ss_pred HhcccCCCccccCccccCcCHHHHHHHHHHHHHHHHCCCCEEEECCccCCCCCcEECCEEeecCCCCChhhCCceeCcEE
Confidence 999999999999999999999999999999999999999 9999998755689999999999999999999999999999
Q ss_pred EEEeeCCHHHHHHHhhcCCCCceEEEecCCHHHHHHHHHhcceeEEEEcCcCCCCCCCCcccCCCCCCCccchHHHHHhh
Q 015042 319 ALMKFKTVEEAIKSANNTQYGLAAGIVTKDLNVANTVSRSIRAGIIWINCYFGFSMDCPYGGYKMSGFGREYGLESLYKY 398 (414)
Q Consensus 319 ~v~~~~~~~eai~~~n~~~~gl~~sv~s~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~p~gG~~~sG~g~~~g~~~~~~~ 398 (414)
+|++|+|+||||+++|+++|||++||||+|.+.++++++++++|+|+||++....+.+||||+|.||+|+++|.+|+++|
T Consensus 408 ~v~~~~~~deAi~~aN~~~~GL~a~v~t~d~~~a~~~a~~l~aG~V~vN~~~~~~~~~PfGG~k~SG~Gr~~G~~~l~~~ 487 (498)
T 4f3x_A 408 SVTRFTGKDDAVAWANDSDYGLASSVWTKDISKAMRAASRLQYGCTWINTHFMLTNEMPHGGIKQSGYGKDMSVYALEDY 487 (498)
T ss_dssp EEEEECTTSCHHHHHHSSSCCSEEEEECSBHHHHHHHHHHCCSSEEEESCCSCCCTTSCBCCSGGGEECCBSHHHHHHHT
T ss_pred EEEEeCCHHHHHHHHhcCCCCceEEEECCCHHHHHHHHHhCCcceEEEcCCCCCCCCCCcCCcCcCCcCccchHHHHHHh
Confidence 99999999999999999999999999999999999999999999999999988778999999999999999999999999
Q ss_pred heeeEEEeeC
Q 015042 399 LQIKSVVTPI 408 (414)
Q Consensus 399 ~~~k~i~~~~ 408 (414)
|+.|+|+++.
T Consensus 488 t~~k~v~~~~ 497 (498)
T 4f3x_A 488 TAVRHIMINH 497 (498)
T ss_dssp EEEEEEEEEC
T ss_pred hceEEEEEeC
Confidence 9999998875
|
| >3b4w_A Aldehyde dehydrogenase; RV0223C-NAD complex, structural genomics, PSI-2, protein STR initiative; HET: NAD GOL; 1.80A {Mycobacterium tuberculosis} | Back alignment and structure |
|---|
Probab=100.00 E-value=4.6e-92 Score=716.14 Aligned_cols=406 Identities=41% Similarity=0.662 Sum_probs=385.8
Q ss_pred CHHHHHHHHHhHHHHHHHHHHhcCCChHHHhhchHHHHHHHHHHHHHhhhhhcCcccccCCCcccceeecCCceEEEEcC
Q 015042 1 MWKFADLIEEHVEELAALDALDAGKVYLRAKTAEIPGAAEFLRFFAGAADKIHGEVLKMSSELQGYTLREPVGVVGHIIP 80 (414)
Q Consensus 1 L~~~a~~l~~~~~~l~~~~~~etGk~~~e~~~~ei~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p 80 (414)
|+++++.|++|+++|++++++|+|||..++...|+..+++.+++++.++++..+..++...+...+.+++|+|||++|+|
T Consensus 76 L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea~~~Ev~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~P~GVv~~I~P 155 (495)
T 3b4w_A 76 IAAAVKMLAERKDLFTKLLAAETGQPPTIIETMHWMGSMGAMNYFAGAADKVTWTETRTGSYGQSIVSREPVGVVGAIVA 155 (495)
T ss_dssp HHHHHHHHHHTHHHHHHHHHHHHCCCHHHHHHTTTHHHHHHHHHHHTCGGGSCSEEEEEETTEEEEEEEEECCEEEEECC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccCCCCceEEEEEccCceEEEECC
Confidence 57899999999999999999999999998654799999999999999888776655443333456899999999999999
Q ss_pred CccchHHHHHhHHHHHhhCCeEEeecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhhHHHhhhCCCccEEEEeCCc
Q 015042 81 WNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLTALYYAHLAKLAGIPDGVLNVVPGFGPTAGAAICSHMDIDYVCFTGST 160 (414)
Q Consensus 81 ~n~P~~~~~~~~~~aLaaGN~vv~kps~~~~~~~~~l~~~l~~aG~p~g~v~~v~~~~~~~~~~l~~~~~v~~v~~tGs~ 160 (414)
||||+...++++++||++||+||+|||+.+|+++..+++++.++|+|+|++|++++ +.+.++.|+.||+||+|.||||+
T Consensus 156 wN~P~~~~~~~~~~ALaaGN~VVlKps~~tp~t~~~l~~l~~eaGlP~gvv~vv~g-~~~~g~~L~~~~~v~~I~FTGS~ 234 (495)
T 3b4w_A 156 WNVPLFLAVNKIAPALLAGCTIVLKPAAETPLTANALAEVFAEVGLPEGVLSVVPG-GIETGQALTSNPDIDMFTFTGSS 234 (495)
T ss_dssp SSSHHHHHHHHHHHHHHTTCEEEEECBTTSCHHHHHHHHHHHHTTCCTTSEEECCB-SHHHHHHHTTCTTCCEEEEESCH
T ss_pred CcchHHHHHHHHHHHHHcCCEEEEecCCccHHHHHHHHHHHHHhCCCcCeEEEEeC-CHHHHHHHHhCCCcCEEEEeCCH
Confidence 99999999999999999999999999999999999999999999999999999999 88899999999999999999999
Q ss_pred HHHHHHHHHHHhcccceeEEEcCCCCCceEcCCCCHHHHHHHHHHHhhccCCCCcccCceEEEeCchHHHHHHHHHHHHh
Q 015042 161 DVGRLVMQAAAASNLKQVSLELGGKSPLLIFDDADLDTAADVALLGNLYNKGEICVASSRVFVQEGIYDKFEKKLLEKAK 240 (414)
Q Consensus 161 ~~g~~i~~~~a~~~~~~~~~e~gg~~~~iV~~dadl~~aa~~i~~~~~~~~Gq~C~a~~~i~V~~~i~d~f~~~l~~~~~ 240 (414)
.+|+.|++.++ ++++|+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++
T Consensus 235 ~~G~~i~~~aa-~~l~pv~lELGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~ 313 (495)
T 3b4w_A 235 AVGREVGRRAA-EMLKPCTLELGGKSAAIILEDVDLAAAIPMMVFSGVMNAGQGCVNQTRILAPRSRYDEIVAAVTNFVT 313 (495)
T ss_dssp HHHHHHHHHHH-HTTCCEEEECCCCEEEEECTTCCHHHHHHHHHHHHHGGGGCCTTCEEEEEEEGGGHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhh-hcCCceeecCCCcceEEECCCCCHHHHHHHHHHHHhhcCCCCCCCCeEEEEcccHHHHHHHHHHHHHH
Confidence 99999999988 88999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hcccCCCCCCCCcccccCCHHHHHHHHHHHHHHHHcCCEEEeCCcccC--CCCceeeeEEEeeCCCcccccccceecceE
Q 015042 241 AWLVGDPFDPTVRQGPQISERHFDRILSYIEHGKREGATLLTGGKPIG--DKGYYIEPTIFTNVKEDMIIAKEEIFGPVM 318 (414)
Q Consensus 241 ~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~--~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl 318 (414)
++++|+|.++++++||+++..+++++.+++++++++|+++++||.... ..|+|++|||+.+++++|++++||+||||+
T Consensus 314 ~~~~g~p~~~~~~~gpli~~~~~~rv~~~i~~a~~~Ga~~~~gG~~~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl 393 (495)
T 3b4w_A 314 ALPVGPPSDPAAQIGPLISEKQRTRVEGYIAKGIEEGARLVCGGGRPEGLDNGFFIQPTVFADVDNKMTIAQEEIFGPVL 393 (495)
T ss_dssp HSCBCCTTCTTCCBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCSCCTTCTTSCCCCCEEEESCCTTSHHHHSCCCSSEE
T ss_pred hcCCCCCccCCCccCCCcCHHHHHHHHHHHHHHHhCCCEEEecCcccccccCCceeCCEEecCCCCCChhhhcccccceE
Confidence 999999999999999999999999999999999999999999997643 368999999999999999999999999999
Q ss_pred EEEeeCCHHHHHHHhhcCCCCceEEEecCCHHHHHHHHHhcceeEEEEcCcCCCCCCCCcccCCCCCCCccchHHHHHhh
Q 015042 319 ALMKFKTVEEAIKSANNTQYGLAAGIVTKDLNVANTVSRSIRAGIIWINCYFGFSMDCPYGGYKMSGFGREYGLESLYKY 398 (414)
Q Consensus 319 ~v~~~~~~~eai~~~n~~~~gl~~sv~s~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~p~gG~~~sG~g~~~g~~~~~~~ 398 (414)
+|++|+|+||||+++|+++|||++||||+|.+.++++++++++|+|+||++. ..+.+||||+|.||+|+++|++|+++|
T Consensus 394 ~v~~~~~~deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~V~iN~~~-~~~~~PfGG~k~SG~Gr~~G~~gl~~~ 472 (495)
T 3b4w_A 394 AIIPYDTEEDAIAIANDSVYGLAGSVWTTDVPKGIKISQQIRTGTYGINWYA-FDPGSPFGGYKNSGIGRENGPEGVEHF 472 (495)
T ss_dssp EEEEESSHHHHHHHHHCSSCCSCCEEECSCHHHHHHHHHHSCCSCCEESSCC-CCTTSCBCCSGGGEESCBSHHHHHHTT
T ss_pred EEEecCCHHHHHHHHhcCCCCeEEEEECCCHHHHHHHHHhCCEeEEEECCCC-CCCCCCCCCCCCCCcCccchHHHHHHh
Confidence 9999999999999999999999999999999999999999999999999987 778999999999999999999999999
Q ss_pred heeeEEEeeCC
Q 015042 399 LQIKSVVTPIY 409 (414)
Q Consensus 399 ~~~k~i~~~~~ 409 (414)
+++|+|+.+..
T Consensus 473 ~~~k~v~~~~~ 483 (495)
T 3b4w_A 473 TQQKSVLLPMG 483 (495)
T ss_dssp EEEEEEECCTT
T ss_pred cceeEEEEccC
Confidence 99999988754
|
| >3k2w_A Betaine-aldehyde dehydrogenase; structural genomics, PSI-2, protein initiative; 1.90A {Pseudoalteromonas atlantica T6C} | Back alignment and structure |
|---|
Probab=100.00 E-value=5.3e-92 Score=716.55 Aligned_cols=408 Identities=36% Similarity=0.608 Sum_probs=386.6
Q ss_pred CHHHHHHHHHhHHHHHHHHHHhcCCChHHHhhchHHHHHHHHHHHHHhhhhhcCcccccC-CCcccceeecCCceEEEEc
Q 015042 1 MWKFADLIEEHVEELAALDALDAGKVYLRAKTAEIPGAAEFLRFFAGAADKIHGEVLKMS-SELQGYTLREPVGVVGHII 79 (414)
Q Consensus 1 L~~~a~~l~~~~~~l~~~~~~etGk~~~e~~~~ei~~~~~~l~~~a~~~~~~~~~~~~~~-~~~~~~~~~~P~Gvv~~i~ 79 (414)
|+++++.|++|+++|++++++|+|||..++. .|+..+++.+++++.++++..+...+.. .+...+.+++|+|||++|+
T Consensus 78 L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~-~ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVV~~I~ 156 (497)
T 3k2w_A 78 LRTFANKIRENKHILAPMLVAEQGKLLSVAE-MEVDVTATFIDYGCDNALTIEGDILPSDNQDEKIYIHKVPRGVVVGIT 156 (497)
T ss_dssp HHHHHHHHHTTHHHHHHHHHHHHCCCHHHHH-HHHHHHHHHHHHHHHTTTTCCEEEEECSSTTEEEEEEEEECSEEEEEC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCCHHHHH-HHHHHHHHHHHHHHHHHHHhcCcccccCCCCcceeEEEcCCceEEEEC
Confidence 5789999999999999999999999999865 6999999999999999887766544432 4567889999999999999
Q ss_pred CCccchHHHHHhHHHHHhhCCeEEeecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhhHHHhhhCCCccEEEEeCC
Q 015042 80 PWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLTALYYAHLAKLAGIPDGVLNVVPGFGPTAGAAICSHMDIDYVCFTGS 159 (414)
Q Consensus 80 p~n~P~~~~~~~~~~aLaaGN~vv~kps~~~~~~~~~l~~~l~~aG~p~g~v~~v~~~~~~~~~~l~~~~~v~~v~~tGs 159 (414)
|||||+...++++++||++||+||+|||+.+|.++..+++++.++|+|+|++|++++++.++++.|+.||+||+|+||||
T Consensus 157 PwN~P~~~~~~~~~~ALaaGN~VVlKps~~tp~t~~~l~~ll~~aGlP~gvv~vv~g~~~~~g~~L~~~p~vd~I~fTGS 236 (497)
T 3k2w_A 157 AWNFPLALAGRKIGPALITGNTMVLKPTQETPLATTELGRIAKEAGLPDGVLNVINGTGSVVGQTLCESPITKMITMTGS 236 (497)
T ss_dssp CSSSHHHHHHHHHHHHHHTTCEEEEECCSSSCHHHHHHHHHHHHTTCCTTSEEECCSCTTTHHHHHHHCSSEEEEEEESC
T ss_pred CCccHHHHHHHHHHHHHHcCCEEEEECCCCChHHHHHHHHHHHHhCcCcCeEEEEeCCchHHHHHHHhCCCcCEEEEECc
Confidence 99999999999999999999999999999999999999999999999999999999988889999999999999999999
Q ss_pred cHHHHHHHHHHHhcccceeEEEcCCCCCceEcCCCCHHHHHHHHHHHhhccCCCCcccCceEEEeCchHHHHHHHHHHHH
Q 015042 160 TDVGRLVMQAAAASNLKQVSLELGGKSPLLIFDDADLDTAADVALLGNLYNKGEICVASSRVFVQEGIYDKFEKKLLEKA 239 (414)
Q Consensus 160 ~~~g~~i~~~~a~~~~~~~~~e~gg~~~~iV~~dadl~~aa~~i~~~~~~~~Gq~C~a~~~i~V~~~i~d~f~~~l~~~~ 239 (414)
+.+|+.|++.++ ++++|+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|++++
T Consensus 237 ~~~G~~i~~~aa-~~l~pv~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~ 315 (497)
T 3k2w_A 237 TVAGKQIYKTSA-EYMTPVMLELGGKAPMVVMDDADLDKAAEDALWGRFANCGQVCTCVERLYVHASVYDEFMAKFLPLV 315 (497)
T ss_dssp HHHHHHHHHHHT-TTTCCEEEECCCCEEEEECTTCCHHHHHHHHHHHHHGGGGCSTTSEEEEEEETTTHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhh-hcCCCeEEEcCCCCceEEcCCCCHHHHHHHHHHHHHhCCCCCCcCCcEEEEeHHHHHHHHHHHHHHH
Confidence 999999999988 8899999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhcccCCCCCCCCcccccCCHHHHHHHHHHHHHHHHcCCEEEeCCcc--cCC--CCceeeeEEEeeCCCcccccccceec
Q 015042 240 KAWLVGDPFDPTVRQGPQISERHFDRILSYIEHGKREGATLLTGGKP--IGD--KGYYIEPTIFTNVKEDMIIAKEEIFG 315 (414)
Q Consensus 240 ~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ga~v~~gg~~--~~~--~g~~~~Ptvl~~~~~~~~~~~~E~fg 315 (414)
+++++|+|.++++++||+++..+++++.+++++++++|+++++||.. .+. .|+|+.|||+.+++++|++++||+||
T Consensus 316 ~~~~vg~p~~~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~v~~gG~~~~~~~~~~g~~~~Ptvl~~v~~~~~i~~eEiFG 395 (497)
T 3k2w_A 316 KGLKVGDPMDADSQMGPKCNQREIDNIDHIVHEAIKQGATVATGGKTATVEGFEGGCWYEPTVLVDVKQDNIVVHEETFG 395 (497)
T ss_dssp HTCCBSCTTSTTCSBCCCSCHHHHHHHHHHHHHHHHHHCEEEECCC---------CCCCCCEEEESCCTTSHHHHSCCCS
T ss_pred HhccCCCCCCCCCccccCcCHHHHHHHHHHHHHHHHCCCEEEecCccCCccccCCCceeCCEEEecCCCCcHhhcCCccC
Confidence 99999999999999999999999999999999999999999999973 222 68999999999999999999999999
Q ss_pred ceEEEEeeCCHHHHHHHhhcCCCCceEEEecCCHHHHHHHHHhcceeEEEEcCcCCCCCCCCcccCCCCCCCccchHHHH
Q 015042 316 PVMALMKFKTVEEAIKSANNTQYGLAAGIVTKDLNVANTVSRSIRAGIIWINCYFGFSMDCPYGGYKMSGFGREYGLESL 395 (414)
Q Consensus 316 Pvl~v~~~~~~~eai~~~n~~~~gl~~sv~s~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~p~gG~~~sG~g~~~g~~~~ 395 (414)
||++|++|+|+||||+++|+++|||++||||+|.+.++++++++++|+|+||++....+.+||||+|.||+|+++|++|+
T Consensus 396 PVl~v~~~~~~deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~v~vN~~~~~~~~~PfGG~k~SG~G~~~G~~gl 475 (497)
T 3k2w_A 396 PILPIVKVSSMEQAIEFCNDSIYGLSAYVHTQSFANINQAISDLEVGEVYINRGMGEQHQGFHNGWKQSGFGGEDGKFGL 475 (497)
T ss_dssp SEEEEEEESCHHHHHHHHTCSSEESEEEEECSBHHHHHHHHHHCCSSEEEESCCSCCCTTSCBCCEETSEESCBSHHHHH
T ss_pred cEEEEEEeCCHHHHHHHHhcCCCCcEEEEEcCCHHHHHHHHHhCCeeEEEEcCCCCCCCCCCcCCcCCCcCCccchHHHH
Confidence 99999999999999999999999999999999999999999999999999999988888999999999999999999999
Q ss_pred HhhheeeEEEeeCCC
Q 015042 396 YKYLQIKSVVTPIYN 410 (414)
Q Consensus 396 ~~~~~~k~i~~~~~~ 410 (414)
++||++|+|+.+++.
T Consensus 476 ~~ft~~k~v~~~~~~ 490 (497)
T 3k2w_A 476 EQYLEKKTVYINEAE 490 (497)
T ss_dssp HTTEEEEEEEEECCC
T ss_pred HHhcceEEEEEEccc
Confidence 999999999988753
|
| >2d4e_A 5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase; HPCC; HET: NAD; 2.10A {Thermus thermophilus} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.3e-91 Score=714.20 Aligned_cols=406 Identities=43% Similarity=0.706 Sum_probs=385.8
Q ss_pred CHHHHHHHHHhHHHHHHHHHHhcCCChHHHhhchHHHHHHHHHHHHHhhhhhcCccccc-CCCcccceeecCCceEEEEc
Q 015042 1 MWKFADLIEEHVEELAALDALDAGKVYLRAKTAEIPGAAEFLRFFAGAADKIHGEVLKM-SSELQGYTLREPVGVVGHII 79 (414)
Q Consensus 1 L~~~a~~l~~~~~~l~~~~~~etGk~~~e~~~~ei~~~~~~l~~~a~~~~~~~~~~~~~-~~~~~~~~~~~P~Gvv~~i~ 79 (414)
|+++++.|++|+++|++++++|+|||..++. .|+..+++.+++++.++++..+..++. ..+...+++++|+|||++|+
T Consensus 92 L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea~-~ev~~~~~~l~~~a~~~~~~~g~~~~~~~~~~~~~~~~~P~GVv~~I~ 170 (515)
T 2d4e_A 92 LLRIAELIEKHADELAVMECLDAGQVLRIVR-AQVARAAENFAFYAEYAEHAMEDRTFPVDRDWLYYTVRVPAGPVGIIT 170 (515)
T ss_dssp HHHHHHHHHHTHHHHHHHHHHHHCCCHHHHH-HHHHHHHHHHHHHHTTGGGTTCEEECCBTTTEEEEEEEEECCCEEEEC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCCHHHHH-HHHHHHHHHHHHHHHHHHHhcCcccccCCCCceeEEEEecCCceEEEC
Confidence 5789999999999999999999999999875 799999999999999888776654443 23455788999999999999
Q ss_pred CCccchHHHHHhHHHHHhhCCeEEeecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhhHHHhhhCCCccEEEEeCC
Q 015042 80 PWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLTALYYAHLAKLAGIPDGVLNVVPGFGPTAGAAICSHMDIDYVCFTGS 159 (414)
Q Consensus 80 p~n~P~~~~~~~~~~aLaaGN~vv~kps~~~~~~~~~l~~~l~~aG~p~g~v~~v~~~~~~~~~~l~~~~~v~~v~~tGs 159 (414)
|||||+...++++++||++||+||+|||+.+|+++..+++++.++|+|+|++|++++++.++++.|+.||+||+|+||||
T Consensus 171 PwN~P~~~~~~~~~~ALaaGN~VVlKps~~tp~t~~~l~~l~~eaGlP~gvv~vv~g~~~~~g~~L~~~p~vd~I~FTGS 250 (515)
T 2d4e_A 171 PWNAPLMLSTWRIAPALAFGNTVVLKPAEWSPFTATKLAEILKEADLPPGVFNLVQGFGEEAGAALVAHPLVPLLTLTGE 250 (515)
T ss_dssp CSSSHHHHHHHHHHHHHHTTCCEEEECCTTSCHHHHHHHHHHHHTTCCTTSEEECCCCTTTHHHHHHHCTTCCEEEEESC
T ss_pred CCCchhhhhhhhhhHHHHcCCeeeecCCCCcHHHHHHHHHHHHHhCCCcCeEEEEeCCchHHHHHHHhCCCcCEEEEeCc
Confidence 99999999999999999999999999999999999999999999999999999999977788999999999999999999
Q ss_pred cHHHHHHHHHHHhcccceeEEEcCCCCCceEcCCCCHHHHHHHHHHHhhccCCCCcccCceEEEeCchHHHHHHHHHHHH
Q 015042 160 TDVGRLVMQAAAASNLKQVSLELGGKSPLLIFDDADLDTAADVALLGNLYNKGEICVASSRVFVQEGIYDKFEKKLLEKA 239 (414)
Q Consensus 160 ~~~g~~i~~~~a~~~~~~~~~e~gg~~~~iV~~dadl~~aa~~i~~~~~~~~Gq~C~a~~~i~V~~~i~d~f~~~l~~~~ 239 (414)
+.+|+.|++.++ ++++|+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||++++|+|+++|++++
T Consensus 251 ~~~G~~I~~~aa-~~l~~v~lELGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~ 329 (515)
T 2d4e_A 251 TETGKIVMRNAA-DHLKRLSPELGGKSPALVFADADLERALDAVVFQIFSFNGERCTASSRLLVEEKIFEDFVGKVVERA 329 (515)
T ss_dssp HHHHHHHHHHHG-GGTCEEEEECCCCCEEEECTTSCHHHHHHHHHHHHHGGGGCSTTCCCEEEEEHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHh-hcCCceEecCCCcCeEEEcCCCCHHHHHHHHHHHHHhcCCCCCCCCeEEEEehhHHHHHHHHHHHHH
Confidence 999999999988 8899999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhcccCCCCCCCCcccccCCHHHHHHHHHHHHHHHHcCCEEEeCCcccC--------CCCceeeeEEEeeCCCccccccc
Q 015042 240 KAWLVGDPFDPTVRQGPQISERHFDRILSYIEHGKREGATLLTGGKPIG--------DKGYYIEPTIFTNVKEDMIIAKE 311 (414)
Q Consensus 240 ~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~--------~~g~~~~Ptvl~~~~~~~~~~~~ 311 (414)
+++++|+|.++++++||+++..+++++.+++++++++|+++++||.... ..|+|++|||+.+ +++|.+++|
T Consensus 330 ~~~~~g~p~~~~~~~gpli~~~~~~rv~~~i~~a~~~Ga~~~~gG~~~~~~~~~~~~~~g~~~~PTvl~~-~~~~~i~~e 408 (515)
T 2d4e_A 330 RAIRVGHPLDPETEVGPLIHPEHLQRVLGYVEAGKREGARLLVGGERAKTSFRGEDLSRGNYLLPTVFVG-ENHMKIAQE 408 (515)
T ss_dssp HHCCBCCTTSTTCSBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCSBCCBCTTSCBCTTTTCBCCEEEEC-CTTSHHHHS
T ss_pred hhcccCCcccccCccCCCcCHHHHHHHHHHHHHHHHCCCEEEeCCccccccccccccCCCceeCCEEEeC-CCCChhhhc
Confidence 9999999999999999999999999999999999999999999997643 2699999999999 999999999
Q ss_pred ceecceEEEEeeCCHHHHHHHhhcCCCCceEEEecCCHHHHHHHHHhcceeEEEEcCcCCCCCCCCcccCCCCCCCccch
Q 015042 312 EIFGPVMALMKFKTVEEAIKSANNTQYGLAAGIVTKDLNVANTVSRSIRAGIIWINCYFGFSMDCPYGGYKMSGFGREYG 391 (414)
Q Consensus 312 E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~sv~s~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~p~gG~~~sG~g~~~g 391 (414)
|+||||++|++|+|+||||+++|+++|||++||||+|.+.++++++++++|+|+||++....+.+||||+|.||+|+++|
T Consensus 409 EiFGPVl~v~~~~~~deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~V~vN~~~~~~~~~PfGG~k~SG~Gr~~G 488 (515)
T 2d4e_A 409 EIFGPVLVAIPFKDEEEALRKANDTKYGLAAYVFTRDLERAHRLALELEAGMVYLNSHNVRHLPTPFGGVKGSGDRREGG 488 (515)
T ss_dssp CCCSSEEEEEEESSHHHHHHHHHCSSCCSEEEEECSBHHHHHHHHHHSCSSEEEESSSCCCCTTSCBCCSGGGBCSCBSH
T ss_pred cccCCceEEEeeCCHHHHHHHHhcCCCCceEEEECCCHHHHHHHHHhCCeeEEEECCCCCCCCCCCCCCcCCCCCCccch
Confidence 99999999999999999999999999999999999999999999999999999999987777899999999999999999
Q ss_pred HHHHHhhheeeEEEeeCC
Q 015042 392 LESLYKYLQIKSVVTPIY 409 (414)
Q Consensus 392 ~~~~~~~~~~k~i~~~~~ 409 (414)
++|+++|+++|+|+.+..
T Consensus 489 ~~gl~~~~~~K~v~~~~~ 506 (515)
T 2d4e_A 489 TYALDFYTDLKTIALPLR 506 (515)
T ss_dssp HHHHHHHEEEEEEEEESS
T ss_pred HHHHHHhCceeEEEEcCC
Confidence 999999999999988764
|
| >1a4s_A ALDH, betaine aldehyde dehydrogenase; oxidoreductase, aldehyde oxidation; 2.10A {Gadus callarias} SCOP: c.82.1.1 PDB: 1bpw_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-91 Score=714.67 Aligned_cols=407 Identities=39% Similarity=0.738 Sum_probs=386.0
Q ss_pred CHHHHHHHHHhHHHHHHHHHHhcCCChHHHhhchHHHHHHHHHHHHHhhhhhcCcccccCCCcccceeecCCceEEEEcC
Q 015042 1 MWKFADLIEEHVEELAALDALDAGKVYLRAKTAEIPGAAEFLRFFAGAADKIHGEVLKMSSELQGYTLREPVGVVGHIIP 80 (414)
Q Consensus 1 L~~~a~~l~~~~~~l~~~~~~etGk~~~e~~~~ei~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p 80 (414)
|+++++.|++|+++|++++++|+|||..++ ..|+..+++.+++++.++++..++.++...+...+++++|+|||++|+|
T Consensus 86 L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea-~~ev~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~P~GVv~~I~P 164 (503)
T 1a4s_A 86 MLEAARIIRERRDNIAKLEVINNGKTITEA-EYDIDAAWQCIEYYAGLAPTLSGQHIQLPGGAFAYTRREPLGVCAGILA 164 (503)
T ss_dssp HHHHHHHHHHTHHHHHHHHHHHHCCCHHHH-HHHHHHHHHHHHHHHHHGGGCCEEEEECGGGCEEEEEEEECSEEEEECC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCCHHHH-HHHHHHHHHHHHHHHHHHHHhcCCcccCCCCceeEEEEecCceEEEECC
Confidence 578999999999999999999999999986 5699999999999999988766554443334457889999999999999
Q ss_pred CccchHHHHHhHHHHHhhCCeEEeecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhhHHHhhhCCCccEEEEeCCc
Q 015042 81 WNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLTALYYAHLAKLAGIPDGVLNVVPGFGPTAGAAICSHMDIDYVCFTGST 160 (414)
Q Consensus 81 ~n~P~~~~~~~~~~aLaaGN~vv~kps~~~~~~~~~l~~~l~~aG~p~g~v~~v~~~~~~~~~~l~~~~~v~~v~~tGs~ 160 (414)
||||+...++++++||++||+||+|||+.+|+++..+++++.++|+|+|++|++++.+ ++++.|+.||+||+|.||||+
T Consensus 165 wN~P~~~~~~~~a~ALaaGN~VVlKps~~tp~ta~~l~~l~~~aGlP~gvv~vv~g~~-~~g~~L~~~p~v~~V~FTGS~ 243 (503)
T 1a4s_A 165 WNYPFMIAAWKCAPALACGNAVVFKPSPMTPVTGVILAEIFHEAGVPVGLVNVVQGGA-ETGSLLCHHPNVAKVSFTGSV 243 (503)
T ss_dssp SSSHHHHHHHHHHHHHHTTCEEEEECCTTSCHHHHHHHHHHHHTTCCTTSEEECCCSH-HHHHHHHHCTTCCEEEEESCH
T ss_pred CcchHHHHHHHHHHHHHcCCEEEEECCCCChHHHHHHHHHHHHhCCCcCeEEEEecCc-hHHHHHHhCCCcCEEEEeCCH
Confidence 9999999999999999999999999999999999999999999999999999999977 889999999999999999999
Q ss_pred HHHHHHHHHHHhcccceeEEEcCCCCCceEcCCCCHHHHHHHHHHHhhccCCCCcccCceEEEeCchHHHHHHHHHHHHh
Q 015042 161 DVGRLVMQAAAASNLKQVSLELGGKSPLLIFDDADLDTAADVALLGNLYNKGEICVASSRVFVQEGIYDKFEKKLLEKAK 240 (414)
Q Consensus 161 ~~g~~i~~~~a~~~~~~~~~e~gg~~~~iV~~dadl~~aa~~i~~~~~~~~Gq~C~a~~~i~V~~~i~d~f~~~l~~~~~ 240 (414)
.+|+.|++.++ ++++|+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|++.++
T Consensus 244 ~~G~~i~~~aa-~~~~~v~lELGGk~p~IV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~ 322 (503)
T 1a4s_A 244 PTGKKVMEMSA-KTVKHVTLELGGKSPLLIFKDCELENAVRGALMANFLTQGQVCTNGTRVFVQREIMPQFLEEVVKRTK 322 (503)
T ss_dssp HHHHHHHHHHH-TTTCEEEEECCCCCEEEECTTSCHHHHHHHHHHTTCGGGGCCTTCCCEEEEEGGGHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhh-hcCCceEEecCCcCeEEECCCCCHHHHHHHHHHHHHhcCCCCCcCCcEEEEehHHHHHHHHHHHHHHH
Confidence 99999999998 89999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hcccCCCCCCCCcccccCCHHHHHHHHHHHHHHHHcCCEEEeCCccc--C----CCCceeeeEEEeeCCCccccccccee
Q 015042 241 AWLVGDPFDPTVRQGPQISERHFDRILSYIEHGKREGATLLTGGKPI--G----DKGYYIEPTIFTNVKEDMIIAKEEIF 314 (414)
Q Consensus 241 ~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ga~v~~gg~~~--~----~~g~~~~Ptvl~~~~~~~~~~~~E~f 314 (414)
++++|+|.++++++||+++..+++++.+++++++++|+++++||... . ..|+|++|||+.+++++|++++||+|
T Consensus 323 ~~~~G~p~~~~~~~gpli~~~~~~rv~~~i~~a~~~Ga~~~~gG~~~~~~~~~~~~g~~~~PTvl~~v~~~~~i~~eEiF 402 (503)
T 1a4s_A 323 AIVVGDPLLTETRMGGLISKPQLDKVLGFVAQAKKEGARVLCGGEPLTPSDPKLKNGYFMSPCVLDNCRDDMTCVKEEIF 402 (503)
T ss_dssp TCCBSCTTSTTCCBCCCSCHHHHHHHHHHHHHHHHHTCEEEECCSBCCCSSGGGTTSCCBCCEEEESCCTTSHHHHSCCC
T ss_pred hcCCCCCcccCCccCCCcCHHHHHHHHHHHHHHHHCCCEEEeCCcccccccccccCCceeCCEEEecCCCCCHHHhcccc
Confidence 99999999999999999999999999999999999999999999764 2 36899999999999999999999999
Q ss_pred cceEEEEeeCCHHHHHHHhhcCCCCceEEEecCCHHHHHHHHHhcceeEEEEcCcCCCCCCCCcccCCCCCCCccchHHH
Q 015042 315 GPVMALMKFKTVEEAIKSANNTQYGLAAGIVTKDLNVANTVSRSIRAGIIWINCYFGFSMDCPYGGYKMSGFGREYGLES 394 (414)
Q Consensus 315 gPvl~v~~~~~~~eai~~~n~~~~gl~~sv~s~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~p~gG~~~sG~g~~~g~~~ 394 (414)
|||++|++|+|+||||+++|+++|||++||||+|.+.++++++++++|+|+||++....+.+||||+|.||+|+++|++|
T Consensus 403 GPVl~v~~~~~~deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~V~vN~~~~~~~~~PfGG~k~SG~G~~~G~~~ 482 (503)
T 1a4s_A 403 GPVMSVLPFDTEEEVLQRANNTTFGLASGVFTRDISRAHRVAANLEAGTCYINTYSISPVEVPFGGYKMSGFGRENGQAT 482 (503)
T ss_dssp SSEEEEEEECCHHHHHHHHHCSSCCSEEEEECSBHHHHHHHHHHSCSSEEEESCCCCCCTTSCBCCSGGGEECCBSTTGG
T ss_pred CceEEEEecCCHHHHHHHHhcCCCCceEEEECCCHHHHHHHHHHCceeEEEECCCCCCCCCCCCCCcCCCCCCccchHHH
Confidence 99999999999999999999999999999999999999999999999999999988777889999999999999999999
Q ss_pred HHhhheeeEEEeeCCC
Q 015042 395 LYKYLQIKSVVTPIYN 410 (414)
Q Consensus 395 ~~~~~~~k~i~~~~~~ 410 (414)
+++|++.|+|+.+.+.
T Consensus 483 l~~f~~~k~v~~~~~~ 498 (503)
T 1a4s_A 483 VDYYSQLKTVIVEMGD 498 (503)
T ss_dssp GGGSEEEEEEEECCSC
T ss_pred HHHhcCceEEEEccCC
Confidence 9999999999887643
|
| >3r31_A BADH, betaine aldehyde dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.15A {Agrobacterium tumefaciens} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.9e-92 Score=719.00 Aligned_cols=408 Identities=40% Similarity=0.717 Sum_probs=384.4
Q ss_pred CHHHHHHHHHhHHHHHHHHHHhcCCChHHHhhchHHHHHHHHHHHHHhhhh----hcCcccccCCCcccceeecCCceEE
Q 015042 1 MWKFADLIEEHVEELAALDALDAGKVYLRAKTAEIPGAAEFLRFFAGAADK----IHGEVLKMSSELQGYTLREPVGVVG 76 (414)
Q Consensus 1 L~~~a~~l~~~~~~l~~~~~~etGk~~~e~~~~ei~~~~~~l~~~a~~~~~----~~~~~~~~~~~~~~~~~~~P~Gvv~ 76 (414)
|+++++.|++|+++|++++++|+|||..++ |+..+++.+++++.+.++ +.+...+...+. .+.+++|+|||+
T Consensus 80 L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea---ev~~~~~~~~~~a~~~~~~~~~~~g~~~~~~~~~-~~~~~~P~GVV~ 155 (517)
T 3r31_A 80 LKRAADIMRERNDALSTLETLDTGKPIQET---IVADPTSGADAFEFFGGIAPSALNGDYIPLGGDF-AYTKRVPLGVCV 155 (517)
T ss_dssp HHHHHHHHHHTHHHHHHHHHHHHCCCHHHH---HHHSHHHHHHHHHHHHHHHHHHTCCCEEECSSSE-EEEEEEECSEEE
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCCHHHH---HHHHHHHHHHHHHHHhhhccccccCcccccCCCc-ceEEEcCccEEE
Confidence 578999999999999999999999999975 999999999999998877 666555443455 899999999999
Q ss_pred EEcCCccchHHHHHhHHHHHhhCCeEEeecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhhHHHhhhCCCccEEEE
Q 015042 77 HIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLTALYYAHLAKLAGIPDGVLNVVPGFGPTAGAAICSHMDIDYVCF 156 (414)
Q Consensus 77 ~i~p~n~P~~~~~~~~~~aLaaGN~vv~kps~~~~~~~~~l~~~l~~aG~p~g~v~~v~~~~~~~~~~l~~~~~v~~v~~ 156 (414)
+|+|||||+...++++++||++||+||+|||+.+|+++..+++++.++|+|+|++|++++ +.+.++.|+.||+||+|+|
T Consensus 156 ~I~PwN~P~~~~~~~~a~ALaaGN~VVlKps~~tp~t~~~l~~ll~eaGlP~gvv~vv~g-~~~~g~~L~~~p~vd~I~F 234 (517)
T 3r31_A 156 GIGAWNYPQQIACWKAAPALVAGNAMVFKPSENTPLGALKIAEILIEAGLPKGLFNVIQG-DRDTGPLLVNHPDVAKVSL 234 (517)
T ss_dssp EECCSSSHHHHHHHHHHHHHHTTCEEEEECCTTSCSHHHHHHHHHHHTTCCTTSEEECCC-CTTHHHHHHTCTTEEEEEE
T ss_pred EECCCcchHHHHHHHHHHHHHcCCEEEEEcCcccHHHHHHHHHHHHHhCcCcccEEEEEC-CHHHHHHHHhCCCcCEEec
Confidence 999999999999999999999999999999999999999999999999999999999999 7889999999999999999
Q ss_pred eCCcHHHHHHHHHHHhcccceeEEEcCCCCCceEcCCCCHHHHHHHHHHHhhccCCCCcccCceEEEeCchHHHHHHHHH
Q 015042 157 TGSTDVGRLVMQAAAASNLKQVSLELGGKSPLLIFDDADLDTAADVALLGNLYNKGEICVASSRVFVQEGIYDKFEKKLL 236 (414)
Q Consensus 157 tGs~~~g~~i~~~~a~~~~~~~~~e~gg~~~~iV~~dadl~~aa~~i~~~~~~~~Gq~C~a~~~i~V~~~i~d~f~~~l~ 236 (414)
|||+.+|+.|++.++ ++++|+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|+
T Consensus 235 TGS~~~G~~i~~~aa-~~lk~v~lElGGk~p~IV~~dADl~~Aa~~i~~~~f~n~GQ~C~a~~rvlV~~~i~d~f~~~l~ 313 (517)
T 3r31_A 235 TGSVPTGRKVAAAAA-GHLKHVTMELGGKSPMIVFDDADIESAVGGAMLGNFYSSGQVCSNGTRVFVQKKAKARFLENLK 313 (517)
T ss_dssp ESCHHHHHHHHHHHH-HTTCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHTSCCHHHHTTCEEEEEEGGGHHHHHHHHH
T ss_pred cCCHHHHHHHHHHhh-cCCCcEEEEcCCcCeEEEecCCCHHHHHHHHHHHHhcCCCceeccCceEEEeHHHHHHHHHHHH
Confidence 999999999999988 8899999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhhcccCCCCCCCCcccccCCHHHHHHHHHHHHHHHHcCCEEEeCCcccC---CCCceeeeEEEeeCCCcccccccce
Q 015042 237 EKAKAWLVGDPFDPTVRQGPQISERHFDRILSYIEHGKREGATLLTGGKPIG---DKGYYIEPTIFTNVKEDMIIAKEEI 313 (414)
Q Consensus 237 ~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~---~~g~~~~Ptvl~~~~~~~~~~~~E~ 313 (414)
++++++++|+|.++++++||+++..+++++.++|++++++|+++++||...+ ..|+|+.|||+.+++++|++++||+
T Consensus 314 ~~~~~~~~G~p~~~~~~~Gpli~~~~~~rv~~~i~~a~~~Ga~v~~gG~~~~~~~~~g~~~~PTvl~~v~~~~~i~~eEi 393 (517)
T 3r31_A 314 RRTEAMILGDPLDYATHLGPLVSKAQQEKVLSYIEKGKAEGATLITGGGIPNNVAGEGAYVQPTVFADVTDDMTIAREEI 393 (517)
T ss_dssp HHHHHCCBCCTTSTTCSBCCBSCHHHHHHHHHHHHHHHHHTCEEEECCSCCSSCCSSSBCCCCEEEEEECTTSHHHHSCC
T ss_pred HHHHhccCCCCCCcCCcccCCcCHHHHHHHHHHHHHHHhCCCEEEECCccCcccCCCCceECCEEEecCCCCCcccccee
Confidence 9999999999999999999999999999999999999999999999993121 3799999999999999999999999
Q ss_pred ecceEEEEeeCCHHHHHHHhhcCCCCceEEEecCCHHHHHHHHHhcceeEEEEcCcCCCCCCCCcccCCCCCCCccchHH
Q 015042 314 FGPVMALMKFKTVEEAIKSANNTQYGLAAGIVTKDLNVANTVSRSIRAGIIWINCYFGFSMDCPYGGYKMSGFGREYGLE 393 (414)
Q Consensus 314 fgPvl~v~~~~~~~eai~~~n~~~~gl~~sv~s~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~p~gG~~~sG~g~~~g~~ 393 (414)
||||++|++|+|+||||+++|+++|||++||||+|.+.++++++++++|+|+||++....+.+||||+|.||+|+++|++
T Consensus 394 FGPVl~v~~~~~~deAi~~aN~~~~gLaa~v~t~d~~~a~~~~~~l~aG~V~iN~~~~~~~~~PfGG~k~SG~Gr~~G~~ 473 (517)
T 3r31_A 394 FGPVMCVLDFDDEDEVLARANATEFGLAGGVFTADLARAHRVVDGLEAGTLWINTYNLCPVEIPFGGSKQSGFGRENSAA 473 (517)
T ss_dssp SSSEEEEEEECCHHHHHHHHHCSSEESEEEEECSCHHHHHHHHHHSCCSEEEESSCCCCCTTSCBCCEETTEECCBSTGG
T ss_pred eccEEEEEEeCCHHHHHHHHhCCCCCeeEEEEeCCHHHHHHHHHHCCcceEEECCCCCCCCCCCcCCcCcCCCCcCchHH
Confidence 99999999999999999999999999999999999999999999999999999998888889999999999999999999
Q ss_pred HHHhhheeeEEEeeCC--CCCCC
Q 015042 394 SLYKYLQIKSVVTPIY--NSPWL 414 (414)
Q Consensus 394 ~~~~~~~~k~i~~~~~--~~~~~ 414 (414)
|+++||+.|+|+++.+ ..||+
T Consensus 474 gl~~ft~~K~v~~~~~~~~~~~~ 496 (517)
T 3r31_A 474 ALEHYSELKTVYVSTGKVDAPYA 496 (517)
T ss_dssp GGGGSEEEEEEEECCC-------
T ss_pred HHHHhhceEEEEEcCCCCCCCch
Confidence 9999999999988765 34553
|
| >3jz4_A Succinate-semialdehyde dehydrogenase [NADP+]; tetramer, NADP binding, oxidoreductase; HET: NAP; 2.30A {Escherichia coli} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.3e-91 Score=709.00 Aligned_cols=405 Identities=39% Similarity=0.670 Sum_probs=386.1
Q ss_pred CHHHHHHHHHhHHHHHHHHHHhcCCChHHHhhchHHHHHHHHHHHHHhhhhhcCcccccC-CCcccceeecCCceEEEEc
Q 015042 1 MWKFADLIEEHVEELAALDALDAGKVYLRAKTAEIPGAAEFLRFFAGAADKIHGEVLKMS-SELQGYTLREPVGVVGHII 79 (414)
Q Consensus 1 L~~~a~~l~~~~~~l~~~~~~etGk~~~e~~~~ei~~~~~~l~~~a~~~~~~~~~~~~~~-~~~~~~~~~~P~Gvv~~i~ 79 (414)
|+++++.|++|+++|++++++|+|||..++ ..|+..+++.+++++....+..+...+.. .+...+.+++|+|||++|+
T Consensus 75 L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a-~~ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~ 153 (481)
T 3jz4_A 75 LRNWFNLMMEHQDDLARLMTLEQGKPLAEA-KGEISYAASFIEWFAEEGKRIYGDTIPGHQADKRLIVIKQPIGVTAAIT 153 (481)
T ss_dssp HHHHHHHHHHTHHHHHHHHHHHHCCCHHHH-HHHHHHHHHHHHHHHHHGGGCCEEEECCSSTTEEEEEEEEECCEEEEEC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHcCCCHHHH-HHHHHHHHHHHHHHHHHHHHhcCccccccCCCceEEEEEcCccEEEEEC
Confidence 578999999999999999999999999976 46999999999999998876655544432 4566789999999999999
Q ss_pred CCccchHHHHHhHHHHHhhCCeEEeecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhhHHHhhhCCCccEEEEeCC
Q 015042 80 PWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLTALYYAHLAKLAGIPDGVLNVVPGFGPTAGAAICSHMDIDYVCFTGS 159 (414)
Q Consensus 80 p~n~P~~~~~~~~~~aLaaGN~vv~kps~~~~~~~~~l~~~l~~aG~p~g~v~~v~~~~~~~~~~l~~~~~v~~v~~tGs 159 (414)
|||||+...++++++||++||+||+|||+.+|+++..+.+++.++|+|+|++|++++++.+.++.|+.||+||+|.||||
T Consensus 154 PwN~P~~~~~~~~~~ALaaGN~VVlKps~~tp~~~~~l~~l~~~aGlP~gvv~vv~g~~~~~g~~L~~~p~v~~I~fTGS 233 (481)
T 3jz4_A 154 PWNFPAAMITRKAGPALAAGCTMVLKPASQTPFSALALAELAIRAGVPAGVFNVVTGSAGAVGNELTSNPLVRKLSFTGS 233 (481)
T ss_dssp CSSSTTHHHHHHHHHHHHHTCEEEEECCTTSCHHHHHHHHHHHHHTCCTTTEEECCBCTHHHHHHHHHCTTEEEEEEESC
T ss_pred CCcchHHHHHHHHHHHHHcCCEEEEECCCCCcHHHHHHHHHHHHhCcCCCeEEEEeCCChHHHHHHHhCCCcCEEEEECC
Confidence 99999999999999999999999999999999999999999999999999999999988889999999999999999999
Q ss_pred cHHHHHHHHHHHhcccceeEEEcCCCCCceEcCCCCHHHHHHHHHHHhhccCCCCcccCceEEEeCchHHHHHHHHHHHH
Q 015042 160 TDVGRLVMQAAAASNLKQVSLELGGKSPLLIFDDADLDTAADVALLGNLYNKGEICVASSRVFVQEGIYDKFEKKLLEKA 239 (414)
Q Consensus 160 ~~~g~~i~~~~a~~~~~~~~~e~gg~~~~iV~~dadl~~aa~~i~~~~~~~~Gq~C~a~~~i~V~~~i~d~f~~~l~~~~ 239 (414)
+.+|+.|++.++ ++++|+++|+|||||+||++|||++.|++.+++++|.|+||.|+++++||||+++||+|+++|++++
T Consensus 234 ~~~g~~i~~~aa-~~~~~v~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~ 312 (481)
T 3jz4_A 234 TEIGRQLMEQCA-KDIKKVSLELGGNAPFIVFDDADLDKAVEGALASKFRNAGQTCVCANRLYVQDGVYDRFAEKLQQAM 312 (481)
T ss_dssp HHHHHHHHHHHT-TTTCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCSTTSEEEEEEEGGGHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHh-hcCCceEEecCCCCeEEEcCCCCHHHHHHHHHHHHHHhCCCcccCCcEEEEeHHHHHHHHHHHHHHH
Confidence 999999999988 8999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhcccCCCCCCCCcccccCCHHHHHHHHHHHHHHHHcCCEEEeCCcccCCCCceeeeEEEeeCCCcccccccceecceEE
Q 015042 240 KAWLVGDPFDPTVRQGPQISERHFDRILSYIEHGKREGATLLTGGKPIGDKGYYIEPTIFTNVKEDMIIAKEEIFGPVMA 319 (414)
Q Consensus 240 ~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~ 319 (414)
+++++|+|.++++++||+++..+++++++++++++++|+++++||...+..|+|++|||+.+++++|.+++||+||||++
T Consensus 313 ~~~~~G~p~~~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~v~~gg~~~~~~g~~~~Ptvl~~v~~~~~i~~eEiFGPVl~ 392 (481)
T 3jz4_A 313 SKLHIGDGLDNGVTIGPLIDEKAVAKVEEHIADALEKGARVVCGGKAHERGGNFFQPTILVDVPANAKVSKEETFGPLAP 392 (481)
T ss_dssp TTCCBSCTTSTTCCBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCSBCTTCTTCBCCEEEESCCTTSGGGTSCCCSSEEE
T ss_pred HhccCCCCccCcCccccccCHHHHHHHHHHHHHHHHCCCEEEeCCcccCCCCceeccEEEecCCCCcccccccccCceEE
Confidence 99999999999999999999999999999999999999999999987545689999999999999999999999999999
Q ss_pred EEeeCCHHHHHHHhhcCCCCceEEEecCCHHHHHHHHHhcceeEEEEcCcCCCCCCCCcccCCCCCCCccchHHHHHhhh
Q 015042 320 LMKFKTVEEAIKSANNTQYGLAAGIVTKDLNVANTVSRSIRAGIIWINCYFGFSMDCPYGGYKMSGFGREYGLESLYKYL 399 (414)
Q Consensus 320 v~~~~~~~eai~~~n~~~~gl~~sv~s~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~p~gG~~~sG~g~~~g~~~~~~~~ 399 (414)
|++|+|+||||+++|+++|||++||||+|.+.++++++++++|.|+||++....+.+||||+|.||+|+++|++|+++||
T Consensus 393 v~~~~~~deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~~G~v~iN~~~~~~~~~PfGG~k~SG~G~~~g~~g~~~~t 472 (481)
T 3jz4_A 393 LFRFKDEADVIAQANDTEFGLAAYFYARDLSRVFRVGEALEYGIVGINTGIISNEVAPFGGIKASGLGREGSKYGIEDYL 472 (481)
T ss_dssp EEEECCHHHHHHHHHCSSCCSEEEEECCBHHHHHHHHHHCCCSEEEESCSCCCCSSSCBCCSGGGEESCBSHHHHHHTTE
T ss_pred EEEECCHHHHHHHHhcCCCCceEEEECCCHHHHHHHHHhCCeeeEEECCCCCCCCCCCcCCcccCcCCCCchHHHHHHhh
Confidence 99999999999999999999999999999999999999999999999998888889999999999999999999999999
Q ss_pred eeeEEEee
Q 015042 400 QIKSVVTP 407 (414)
Q Consensus 400 ~~k~i~~~ 407 (414)
+.|+|++.
T Consensus 473 ~~k~v~~~ 480 (481)
T 3jz4_A 473 EIKYMCIG 480 (481)
T ss_dssp EEEEEEEE
T ss_pred ceeEEEEe
Confidence 99999875
|
| >3qan_A 1-pyrroline-5-carboxylate dehydrogenase 1; proline oxidation, redox control, apoptosis, NAD binding, oxidoreductase, PSI-biology; 1.95A {Bacillus halodurans} PDB: 3rjl_A | Back alignment and structure |
|---|
Probab=100.00 E-value=2.7e-91 Score=716.00 Aligned_cols=407 Identities=34% Similarity=0.578 Sum_probs=384.2
Q ss_pred CHHHHHHHHHhHHHHHHHHHHhcCCChHHHhhchHHHHHHHHHHHHHh-hhhhcCcccccCCCcccceeecCCceEEEEc
Q 015042 1 MWKFADLIEEHVEELAALDALDAGKVYLRAKTAEIPGAAEFLRFFAGA-ADKIHGEVLKMSSELQGYTLREPVGVVGHII 79 (414)
Q Consensus 1 L~~~a~~l~~~~~~l~~~~~~etGk~~~e~~~~ei~~~~~~l~~~a~~-~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~ 79 (414)
|+++++.|++|+++|++++++|+|||..++. .|+..+++.+++++.+ .+...++..+...+...+.+++|+|||++|+
T Consensus 102 L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea~-~Ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVV~~I~ 180 (538)
T 3qan_A 102 LVKAAAIIRRRKHEFSAWLVHEAGKPWKEAD-ADTAEAIDFLEYYARQMIELNRGKEILSRPGEQNRYFYTPMGVTVTIS 180 (538)
T ss_dssp HHHHHHHHHHTHHHHHHHHHHHTCCCHHHHH-HHHHHHHHHHHHHHHHHHHHHTCBCCCCCTTEEEEEEEEECCEEEEEC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCCHHHHH-HHHHHHHHHHHHHHHHHHHhcCCeeecccCCcceeeecCCCcEEEEEC
Confidence 5789999999999999999999999999865 5999999999999998 5555555554434567889999999999999
Q ss_pred CCccchHHHHHhHHHHHhhCCeEEeecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhhHHHhhhCCCccEEEEeCC
Q 015042 80 PWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLTALYYAHLAKLAGIPDGVLNVVPGFGPTAGAAICSHMDIDYVCFTGS 159 (414)
Q Consensus 80 p~n~P~~~~~~~~~~aLaaGN~vv~kps~~~~~~~~~l~~~l~~aG~p~g~v~~v~~~~~~~~~~l~~~~~v~~v~~tGs 159 (414)
|||||+...++++++||++||+||+|||+.+|+++..+.+++.++|+|+|++|++++++.++++.|+.||+||+|.||||
T Consensus 181 PwN~P~~~~~~~~a~ALaaGN~VVlKps~~tp~ta~~l~~l~~eaGlP~gvv~vv~g~~~~~g~~L~~~p~v~~I~FTGS 260 (538)
T 3qan_A 181 PWNFALAIMVGTAVAPIVTGNTVVLKPASTTPVVAAKFVEVLEDAGLPKGVINYVPGSGAEVGDYLVDHPKTSLITFTGS 260 (538)
T ss_dssp CSTTTTHHHHHHHHHHHHTTCEEEEECCTTSHHHHHHHHHHHHHTTCCTTSEEECCBCTTTTHHHHHHCTTEEEEEEESC
T ss_pred CCchHHHHHHHHHHHHHHcCCEEEEECCCccHHHHHHHHHHHHHhCCCCCeEEEEecCCHHHHHHHHhCCCcCEEEEECC
Confidence 99999999999999999999999999999999999999999999999999999999988889999999999999999999
Q ss_pred cHHHHHHHHHHHhcc------cceeEEEcCCCCCceEcCCCCHHHHHHHHHHHhhccCCCCcccCceEEEeCchHHHHHH
Q 015042 160 TDVGRLVMQAAAASN------LKQVSLELGGKSPLLIFDDADLDTAADVALLGNLYNKGEICVASSRVFVQEGIYDKFEK 233 (414)
Q Consensus 160 ~~~g~~i~~~~a~~~------~~~~~~e~gg~~~~iV~~dadl~~aa~~i~~~~~~~~Gq~C~a~~~i~V~~~i~d~f~~ 233 (414)
+.+|+.|++.++ .+ ++|+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|++
T Consensus 261 ~~~G~~i~~~aa-~~~~~~~~lkpv~lELGGk~p~IV~~dADl~~Aa~~i~~~~f~n~GQ~C~a~~rvlV~~~i~d~f~~ 339 (538)
T 3qan_A 261 KDVGVRLYERAA-VVRPGQNHLKRVIVEMGGKDTVVVDRDADLDLAAESILVSAFGFSGQKCSAGSRAVIHKDVYDEVLE 339 (538)
T ss_dssp HHHHHHHHHHHT-SCCTTCCSCCEEEEECCCCCEEEECTTSCHHHHHHHHHHHHHGGGGCSTTCCCEEEEETTTHHHHHH
T ss_pred HHHHHHHHHHhh-hccccccccccEEEecCCCCceEECCCCCHHHHHHHHHHHHHhcCCCCCccCceeEEehHHHHHHHH
Confidence 999999999987 66 89999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhhcccCCCCCCCCcccccCCHHHHHHHHHHHHHHHHcCCEEEeCCcccCCCCceeeeEEEeeCCCcccccccce
Q 015042 234 KLLEKAKAWLVGDPFDPTVRQGPQISERHFDRILSYIEHGKREGATLLTGGKPIGDKGYYIEPTIFTNVKEDMIIAKEEI 313 (414)
Q Consensus 234 ~l~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~ 313 (414)
+|++.++++++|+|.++++++||+++..+++++.+++++++++| ++++||......|+|++|||+.+++++|.+++||+
T Consensus 340 ~l~~~~~~~~vG~p~~~~~~~Gpli~~~~~~rv~~~i~~a~~~G-~~~~gG~~~~~~g~~~~PTvl~~v~~~~~i~~eEi 418 (538)
T 3qan_A 340 KTVALAKNLTVGDPTNRDNYMGPVIDEKAFEKIMSYIEIGKKEG-RLMTGGEGDSSTGFFIQPTIIADLDPEAVIMQEEI 418 (538)
T ss_dssp HHHHHHTTCCBSCTTSTTCSBCCCSCHHHHHHHHHHHHHHHHHS-EEEECCCEECSSSCEECCEEEESCCTTSHHHHSCC
T ss_pred HHHHHHHhccCCCCCCCCCCCcCccCHHHHHHHHHHHHHHHHCC-eEEeCCCcCCCCCceeCCeeeecCCCCChhhCCCc
Confidence 99999999999999999999999999999999999999999999 99999987544799999999999999999999999
Q ss_pred ecceEEEEeeCCHHHHHHHhhcCCCCceEEEecCCHHHHHHHHHhcceeEEEEc-CcCCC-CCCCCcccCCCCCCC-ccc
Q 015042 314 FGPVMALMKFKTVEEAIKSANNTQYGLAAGIVTKDLNVANTVSRSIRAGIIWIN-CYFGF-SMDCPYGGYKMSGFG-REY 390 (414)
Q Consensus 314 fgPvl~v~~~~~~~eai~~~n~~~~gl~~sv~s~d~~~~~~~~~~l~~g~v~iN-~~~~~-~~~~p~gG~~~sG~g-~~~ 390 (414)
||||++|++|+|+||||+++|+++|||++||||+|.+.++++++++++|+|+|| ++... .+.+||||+|.||+| +++
T Consensus 419 FGPVl~V~~~~~~deAi~~aN~~~~gLaa~v~t~d~~~a~~~~~~l~aG~V~iN~~~~~~~~~~~PfGG~k~SG~G~~~~ 498 (538)
T 3qan_A 419 FGPVVAFSKANDFDHALEIANNTEYGLTGAVITRNRAHIEQAKREFHVGNLYFNRNCTGAIVGYHPFGGFKMSGTDSKAG 498 (538)
T ss_dssp CSSEEEEEEESSHHHHHHHHHCSSEESEEEEECSCHHHHHHHHHHCCCSEEEESSCSCCCCTTTSCBCCEETTBSCCCBT
T ss_pred CCcEEEEEEeCCHHHHHHHHhcCCCCcEEEEECCCHHHHHHHHHhCCeeEEEEeCCCCCCCCCCCCcCCcCcCCCCcccc
Confidence 999999999999999999999999999999999999999999999999999999 55554 788999999999999 999
Q ss_pred hHHHHHhhheeeEEEeeCCC
Q 015042 391 GLESLYKYLQIKSVVTPIYN 410 (414)
Q Consensus 391 g~~~~~~~~~~k~i~~~~~~ 410 (414)
|++|+++|++.|+|+++...
T Consensus 499 G~~gl~~ft~~k~v~~~~~~ 518 (538)
T 3qan_A 499 GPDYLALHMQAKTVSEMYAE 518 (538)
T ss_dssp STTTGGGGEEEEEEEEEC--
T ss_pred cHHHHHHhhCeEEEEEecCC
Confidence 99999999999999887653
|
| >1wnd_A Putative betaine aldehyde dehydrogenase; NADH, fluorescence, kinetics, oxidor; 2.10A {Escherichia coli} SCOP: c.82.1.1 PDB: 1wnb_A | Back alignment and structure |
|---|
Probab=100.00 E-value=3.9e-91 Score=708.74 Aligned_cols=404 Identities=37% Similarity=0.642 Sum_probs=383.0
Q ss_pred CHHHHHHHHHhHHHHHHHHHHhcCCChHHHhhchHHHHHHHHHHHHHhhhhhcCcccccC-CCcccceeecCCceEEEEc
Q 015042 1 MWKFADLIEEHVEELAALDALDAGKVYLRAKTAEIPGAAEFLRFFAGAADKIHGEVLKMS-SELQGYTLREPVGVVGHII 79 (414)
Q Consensus 1 L~~~a~~l~~~~~~l~~~~~~etGk~~~e~~~~ei~~~~~~l~~~a~~~~~~~~~~~~~~-~~~~~~~~~~P~Gvv~~i~ 79 (414)
|+++++.|++|+++|++++++|+|||..++...|+..+++.+++++.++++..++.++.. .+...+++++|+|||++|+
T Consensus 88 L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea~~~Ev~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~~P~GVV~~I~ 167 (495)
T 1wnd_A 88 LLKLADVIEENGQVFAELESRNCGKPLHSAFNDEIPAIVDVFRFFAGAARCLNGLAAGEYLEGHTSMIRRDPLGVVASIA 167 (495)
T ss_dssp HHHHHHHHHHTHHHHHHHHHHHHCCCHHHHHHTHHHHHHHHHHHHHHHTTCCEEECBEEEETTEEEEEEEEECSEEEEEC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCccccCCCCCceeEEeeecCCeEEEEC
Confidence 578999999999999999999999999986544999999999999998877665544432 2345688999999999999
Q ss_pred CCccchHHHHHhHHHHHhhCCeEEeecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhhHHHhhhCCCccEEEEeCC
Q 015042 80 PWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLTALYYAHLAKLAGIPDGVLNVVPGFGPTAGAAICSHMDIDYVCFTGS 159 (414)
Q Consensus 80 p~n~P~~~~~~~~~~aLaaGN~vv~kps~~~~~~~~~l~~~l~~aG~p~g~v~~v~~~~~~~~~~l~~~~~v~~v~~tGs 159 (414)
|||||+...++++++||++||+||+|||+.+|+++..+++++.++ +|+|++|++++.+.+.++.|+.||+||+|+||||
T Consensus 168 PwN~P~~~~~~~~a~ALaaGN~VVlKps~~tp~t~~~l~~l~~ea-lP~gvv~vv~g~~~~~g~~L~~~p~vd~I~FTGS 246 (495)
T 1wnd_A 168 PWNYPLMMAAWKLAPALAAGNCVVLKPSEITPLTALKLAELAKDI-FPAGVVNILFGRGKTVGDPLTGHPKVRMVSLTGS 246 (495)
T ss_dssp CSSSHHHHHHHHHHHHHHTTCEEEEECCTTCCHHHHHHHHHHTTT-SCTTSEEECCCCTTTTHHHHHTCTTEEEEEEESC
T ss_pred CCcchHHHHHHHHHHHHHcCCeeEeeCCCCChHHHHHHHHHHHHh-CCcCeEEEEeCCCHHHHHHHHhCCCcCEEEEECc
Confidence 999999999999999999999999999999999999999999999 9999999999977788999999999999999999
Q ss_pred cHHHHHHHHHHHhcccceeEEEcCCCCCceEcCCCCHHHHHHHHHHHhhccCCCCcccCceEEEeCchHHHHHHHHHHHH
Q 015042 160 TDVGRLVMQAAAASNLKQVSLELGGKSPLLIFDDADLDTAADVALLGNLYNKGEICVASSRVFVQEGIYDKFEKKLLEKA 239 (414)
Q Consensus 160 ~~~g~~i~~~~a~~~~~~~~~e~gg~~~~iV~~dadl~~aa~~i~~~~~~~~Gq~C~a~~~i~V~~~i~d~f~~~l~~~~ 239 (414)
+.+|+.|++.++ ++++|+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||++++|+|+++|++.+
T Consensus 247 ~~~G~~i~~~aa-~~l~~v~lELGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~ 325 (495)
T 1wnd_A 247 IATGEHIISHTA-SSIKRTHMELGGKAPVIVFDDADIEAVVEGVRTFGYYNAGQDCTAACRIYAQKGIYDTLVEKLGAAV 325 (495)
T ss_dssp HHHHHHHHHHHG-GGTCEEEEECCCCCEEEECTTSCHHHHHHHHHHHTTGGGGCSTTCCCEEEEETTTHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH-hcCCccccccCCCCeEEECCcCCHHHHHHHHHHHHHhcCCCCCCCCcEEEecchhHHHHHHHHHHHH
Confidence 999999999988 8899999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhcccCCCCCCCCcccccCCHHHHHHHHHHHHHHHHcC-CEEEeCCc-ccCCCCceeeeEEEeeCCCcccccccceecce
Q 015042 240 KAWLVGDPFDPTVRQGPQISERHFDRILSYIEHGKREG-ATLLTGGK-PIGDKGYYIEPTIFTNVKEDMIIAKEEIFGPV 317 (414)
Q Consensus 240 ~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~g-a~v~~gg~-~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPv 317 (414)
+++++|+|.++++++||+++..+++++.+++++++++| +++++||. .. +.|+|++|||+.+++++|++++||+||||
T Consensus 326 ~~~~~g~p~~~~~~~Gpli~~~~~~rv~~~i~~a~~~G~a~~~~gG~~~~-~~g~~~~PTvl~~v~~~~~i~~eEiFGPV 404 (495)
T 1wnd_A 326 ATLKSGAPDDESTELGPLSSLAHLERVGKAVEEAKATGHIKVITGGEKRK-GNGYYYAPTLLAGALQDDAIVQKEVFGPV 404 (495)
T ss_dssp HTCCBCCTTSTTCCBCCCSCHHHHHHHHHHHHHHHHTSSCEEEECCSBCS-SSSCCBCCEEEECCCTTSHHHHSCCCSSE
T ss_pred HhccCCCCccCCCCccCCCCHHHHHHHHHHHHHHHhCCCeEEEECCcccC-CCCCeeCCEEEeCCCCCChhhhccccCce
Confidence 99999999999999999999999999999999999999 99999997 43 36999999999999999999999999999
Q ss_pred EEEEeeCCHHHHHHHhhcCCCCceEEEecCCHHHHHHHHHhcceeEEEEcCcCCCCCCCCcccCCCCCCCccchHHHHHh
Q 015042 318 MALMKFKTVEEAIKSANNTQYGLAAGIVTKDLNVANTVSRSIRAGIIWINCYFGFSMDCPYGGYKMSGFGREYGLESLYK 397 (414)
Q Consensus 318 l~v~~~~~~~eai~~~n~~~~gl~~sv~s~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~p~gG~~~sG~g~~~g~~~~~~ 397 (414)
++|++|+|+||||+++|+++|||++||||+|.+.++++++++++|+|+||++....+.+||||+|.||+|+++|++|+++
T Consensus 405 l~v~~~~~~deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~V~iN~~~~~~~~~PfGG~k~SG~Gr~~G~~gl~~ 484 (495)
T 1wnd_A 405 VSVTPFDNEEQVVNWANDSQYGLASSVWTKDVGRAHRVSARLQYGCTWVNTHFMLVSEMPHGGQKLSGYGKDMSLYGLED 484 (495)
T ss_dssp EEEEEECCHHHHHHHHHSSSCCSEEEEECSBHHHHHHHHHHCCSSEEEESCCCCCCTTSCBCCSGGGEECCBSHHHHHHT
T ss_pred EEEEEeCCHHHHHHHHhcCCCCeeEEEECCCHHHHHHHHHhCCcceEEECCCCCCCCCCCCCCCCcCcCCccchHHHHHH
Confidence 99999999999999999999999999999999999999999999999999987777899999999999999999999999
Q ss_pred hheeeEEEee
Q 015042 398 YLQIKSVVTP 407 (414)
Q Consensus 398 ~~~~k~i~~~ 407 (414)
||++|+|+.+
T Consensus 485 f~~~k~v~~~ 494 (495)
T 1wnd_A 485 YTVVRHVMVK 494 (495)
T ss_dssp TEEEEEEEEE
T ss_pred hhCeEEEEec
Confidence 9999999865
|
| >2imp_A Lactaldehyde dehydrogenase; protein-lactate-NADH ternary complex, oxidoreductase; HET: NAI; 2.10A {Escherichia coli} PDB: 2ilu_A* 2hg2_A* 2opx_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=5.1e-91 Score=707.29 Aligned_cols=405 Identities=35% Similarity=0.607 Sum_probs=383.9
Q ss_pred CHHHHHHHHHhHHHHHHHHHHhcCCChHHHhhchHHHHHHHHHHHHHhhhhhcCcccccC-CCcccceeecCCceEEEEc
Q 015042 1 MWKFADLIEEHVEELAALDALDAGKVYLRAKTAEIPGAAEFLRFFAGAADKIHGEVLKMS-SELQGYTLREPVGVVGHII 79 (414)
Q Consensus 1 L~~~a~~l~~~~~~l~~~~~~etGk~~~e~~~~ei~~~~~~l~~~a~~~~~~~~~~~~~~-~~~~~~~~~~P~Gvv~~i~ 79 (414)
|+++++.|++|+++|++++++|+|||..++. .|+..+++.+++++.++++..+...+.. .+...+.+++|+|||++|+
T Consensus 72 L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea~-~ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~ 150 (479)
T 2imp_A 72 LRKISAGIRERASEISALIVEEGGKIQQLAE-VEVAFTADYIDYMAEWARRYEGEIIQSDRPGENILLFKRALGVTTGIL 150 (479)
T ss_dssp HHHHHHHHHHTHHHHHHHHHHHHCCCHHHHH-HHHHHHHHHHHHHHTTTTTCCCEEECCSSTTEEEEEEEEECSEEEEEC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCCHHHHH-HHHHHHHHHHHHHHHHHHHhhCCccccCCCCceeEEEEeccceEEEEC
Confidence 5789999999999999999999999999864 7999999999999998877655543332 3446789999999999999
Q ss_pred CCccchHHHHHhHHHHHhhCCeEEeecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhhHHHhhhCCCccEEEEeCC
Q 015042 80 PWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLTALYYAHLAKLAGIPDGVLNVVPGFGPTAGAAICSHMDIDYVCFTGS 159 (414)
Q Consensus 80 p~n~P~~~~~~~~~~aLaaGN~vv~kps~~~~~~~~~l~~~l~~aG~p~g~v~~v~~~~~~~~~~l~~~~~v~~v~~tGs 159 (414)
|||||+...++++++||++||+||+|||+.+|+++..+++++.++|+|+|+++++++++.++++.|+.||+||+|.||||
T Consensus 151 PwN~P~~~~~~~~~~ALaaGN~VVlKps~~tp~t~~~l~~l~~~aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~V~fTGS 230 (479)
T 2imp_A 151 PWNFPFFLIARKMAPALLTGNTIVIKPSEFTPNNAIAFAKIVDEIGLPRGVFNLVLGRGETVGQELAGNPKVAMVSMTGS 230 (479)
T ss_dssp CSSSHHHHHHHHHHHHHHTTCEEEEECCTTSCHHHHHHHHHHHHHTCCTTSEEECCSCTTTHHHHHHHCTTEEEEEEESC
T ss_pred CCchHHHHHHHHHHHHHHcCCEEEEECCccchHHHHHHHHHHHHhCCCcCeEEEEECCcHHHHHHHHhCCCcCEEEEeCC
Confidence 99999999999999999999999999999999999999999999999999999999977778999999999999999999
Q ss_pred cHHHHHHHHHHHhcccceeEEEcCCCCCceEcCCCCHHHHHHHHHHHhhccCCCCcccCceEEEeCchHHHHHHHHHHHH
Q 015042 160 TDVGRLVMQAAAASNLKQVSLELGGKSPLLIFDDADLDTAADVALLGNLYNKGEICVASSRVFVQEGIYDKFEKKLLEKA 239 (414)
Q Consensus 160 ~~~g~~i~~~~a~~~~~~~~~e~gg~~~~iV~~dadl~~aa~~i~~~~~~~~Gq~C~a~~~i~V~~~i~d~f~~~l~~~~ 239 (414)
+.+|+.|++.++ ++++|+++|+|||||+||++|||++.|++.+++++|.|+||.|+++++||||+++||+|+++|++++
T Consensus 231 ~~~g~~i~~~aa-~~~~~v~lElGGk~p~iV~~dADl~~aa~~i~~~~~~n~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~ 309 (479)
T 2imp_A 231 VSAGEKIMATAA-KNITKVCLELGGKAPAIVMDDADLELAVKAIVDSRVINSGQVCNCAERVYVQKGIYDQFVNRLGEAM 309 (479)
T ss_dssp HHHHHHHHHHHH-TTTCEEEEECCCCCEEEECTTSCHHHHHHHHHTTSSTTTTCCSSSCSEEEEEGGGHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHh-ccCCcEEEEcCCcCeEEECCCCCHHHHHHHHHHHHhhcCCCcCcCCcEEEEehhhHHHHHHHHHHHH
Confidence 999999999988 8999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhcccCCCCC-CCCcccccCCHHHHHHHHHHHHHHHHcCCEEEeCCcccCCCCceeeeEEEeeCCCcccccccceecceE
Q 015042 240 KAWLVGDPFD-PTVRQGPQISERHFDRILSYIEHGKREGATLLTGGKPIGDKGYYIEPTIFTNVKEDMIIAKEEIFGPVM 318 (414)
Q Consensus 240 ~~~~~g~~~~-~~~~~gpl~~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl 318 (414)
+++++|+|.+ +++++||+++..+++++.+++++++++|+++++||...+..|+|++|||+.+++++|++++||+||||+
T Consensus 310 ~~~~~g~p~~~~~~~~gpli~~~~~~rv~~~i~~a~~~Ga~~~~gG~~~~~~g~~~~Ptvl~~v~~~~~~~~eEiFGPVl 389 (479)
T 2imp_A 310 QAVQFGNPAERNDIAMGPLINAAALERVEQKVARAVEEGARVAFGGKAVEGKGYYYPPTLLLDVRQEMSIMHEETFGPVL 389 (479)
T ss_dssp HTCCBSCTTTCSSCSBCCCSSHHHHHHHHHHHHHHHHTTCEEEECCCCCCSSSCCCCCEEEESCCTTSGGGGSCCCSSEE
T ss_pred HhcccCCccccCCCccCCCcCHHHHHHHHHHHHHHHHCCCEEEECCcccCCCCceECCEEEeCCCCCCHHHhCccCCceE
Confidence 9999999999 999999999999999999999999999999999997643468999999999999999999999999999
Q ss_pred EEEeeCCHHHHHHHhhcCCCCceEEEecCCHHHHHHHHHhcceeEEEEcCcCCCCCCCCcccCCCCCCCccchHHHHHhh
Q 015042 319 ALMKFKTVEEAIKSANNTQYGLAAGIVTKDLNVANTVSRSIRAGIIWINCYFGFSMDCPYGGYKMSGFGREYGLESLYKY 398 (414)
Q Consensus 319 ~v~~~~~~~eai~~~n~~~~gl~~sv~s~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~p~gG~~~sG~g~~~g~~~~~~~ 398 (414)
+|++|+|+||||+++|+++|||++||||+|.+.++++++++++|+|+||++....+.+||||+|.||+|+++|++|+++|
T Consensus 390 ~v~~~~~~~eAi~~aN~~~~gL~a~v~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~PfGG~k~SG~G~~~g~~~l~~~ 469 (479)
T 2imp_A 390 PVVAFDTLEDAISMANDSDYGLTSSIYTQNLNVAMKAIKGLKFGETYINRENFEAMQGFHAGWRKSGIGGADGKHGLHEY 469 (479)
T ss_dssp EEEEESSHHHHHHHHHCSSEESEEEEECCCHHHHHHHHHHCCSSEEEESSCCCCCTTSCBCCEETTEESCBSHHHHHHTT
T ss_pred EEEeeCCHHHHHHHHhcCCCCeeEEEECCCHHHHHHHHHhCCEeEEEECCCCCCCCCCCCCCCCCCCCCCCchHHHHHHh
Confidence 99999999999999999999999999999999999999999999999999877778999999999999999999999999
Q ss_pred heeeEEEee
Q 015042 399 LQIKSVVTP 407 (414)
Q Consensus 399 ~~~k~i~~~ 407 (414)
+++|+|+.+
T Consensus 470 ~~~k~v~~~ 478 (479)
T 2imp_A 470 LQTQVVYLQ 478 (479)
T ss_dssp EEEEEEEEE
T ss_pred cCeeEEEec
Confidence 999999764
|
| >3prl_A NADP-dependent glyceraldehyde-3-phosphate dehydro; structural genomics, protein structure initiative, dehydroge PSI-biology; 2.00A {Bacillus halodurans} PDB: 3rhh_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.4e-91 Score=711.92 Aligned_cols=402 Identities=34% Similarity=0.520 Sum_probs=380.1
Q ss_pred CHHHHHHHHHhHHHHHHHHHHhcCCChHHHhhchHHHHHHHHHHHHHhhhhhcCcccccC--C----CcccceeecCCce
Q 015042 1 MWKFADLIEEHVEELAALDALDAGKVYLRAKTAEIPGAAEFLRFFAGAADKIHGEVLKMS--S----ELQGYTLREPVGV 74 (414)
Q Consensus 1 L~~~a~~l~~~~~~l~~~~~~etGk~~~e~~~~ei~~~~~~l~~~a~~~~~~~~~~~~~~--~----~~~~~~~~~P~Gv 74 (414)
|+++++.|++|+++|++++++|+|||..++. .|+..+++.+++++.+.++..+...+.. . +...+++++|+||
T Consensus 77 L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea~-~Ev~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~P~GV 155 (505)
T 3prl_A 77 LYAWADLLEERKEIIGELIMHEVAKPKKSAI-GEVSRTADIIRHTADEALRLNGETLKGDQFKGGSSKKIALVEREPLGV 155 (505)
T ss_dssp HHHHHHHHHHTHHHHHHHHHHHHTCCHHHHH-HHHHHHHHHHHHHHHHHHTCCEEEEEGGGSTTTCSSEEEEEEEEECSE
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCCHHHHH-HHHHHHHHHHHHHHHHHHHhcCccccccccccccCCceeEEEEcCCcE
Confidence 5789999999999999999999999999865 5999999999999998877665544332 1 3456889999999
Q ss_pred EEEEcCCccchHHHHHhHHHHHhhCCeEEeecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhhHHHhhhCCCccEE
Q 015042 75 VGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLTALYYAHLAKLAGIPDGVLNVVPGFGPTAGAAICSHMDIDYV 154 (414)
Q Consensus 75 v~~i~p~n~P~~~~~~~~~~aLaaGN~vv~kps~~~~~~~~~l~~~l~~aG~p~g~v~~v~~~~~~~~~~l~~~~~v~~v 154 (414)
|++|+|||||+...++++++||++||+||+|||+.+|+++..|.+++.++|+|+|++|++++.+.++++.|+.||+||+|
T Consensus 156 V~~I~PwN~P~~~~~~~~a~ALaaGN~VVlKpse~tp~ta~~l~~ll~eaGlP~gvv~vv~g~~~~~g~~L~~~p~vd~I 235 (505)
T 3prl_A 156 VLAISPFNYPVNLAAAKIAPALVTGNTVVFKPATQGSLSGIKMVEALADAGAPEGIIQVVTGRGSVIGDHLVEHPGIDMI 235 (505)
T ss_dssp EEEEECSSSTTHHHHHHHHHHHHTTCEEEEEECSTTHHHHHHHHHHHHHTTCCTTSEEECCCCHHHHHHHHHTCTTCCEE
T ss_pred EEEECCCccHHHHHHHHHHHHHHcCCEEEEECCCCChHHHHHHHHHHHHhCcCcCeEEEEeCCCHHHHHHHHhCCCCCEE
Confidence 99999999999999999999999999999999999999999999999999999999999999878899999999999999
Q ss_pred EEeCCcHHHHHHHHHHHhcccceeEEEcCCCCCceEcCCCCHHHHHHHHHHHhhccCCCCcccCceEEEeCchHHHHHHH
Q 015042 155 CFTGSTDVGRLVMQAAAASNLKQVSLELGGKSPLLIFDDADLDTAADVALLGNLYNKGEICVASSRVFVQEGIYDKFEKK 234 (414)
Q Consensus 155 ~~tGs~~~g~~i~~~~a~~~~~~~~~e~gg~~~~iV~~dadl~~aa~~i~~~~~~~~Gq~C~a~~~i~V~~~i~d~f~~~ 234 (414)
.||||+.+|+.|++.++ ++|+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||++++|+|+++
T Consensus 236 ~FTGS~~~G~~i~~~aa---l~~v~lELGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~ 312 (505)
T 3prl_A 236 TFTGGTTTGERISEKAK---MIPVVLELGGKDPAIVLDDADLKLTASQIVSGAFSYSGQRCTAIKRVFVQDSVADQLVAN 312 (505)
T ss_dssp EEESCHHHHHHHHHHCC---SSCEEEECCCCEEEEECTTCCHHHHHHHHHHHHHGGGGCCSSSEEEEEEEHHHHHHHHHH
T ss_pred EEeCCHHHHHHHHHHcc---CCcEEEECCCCCCCccCCCCCHHHHHHHHHHHHHhcCCCccccCceEEEeHHHHHHHHHH
Confidence 99999999999998864 899999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhhcccCCCCCCCCcccccCCHHHHHHHHHHHHHHHHcCCEEEeCCcccCCCCceeeeEEEeeCCCccccccccee
Q 015042 235 LLEKAKAWLVGDPFDPTVRQGPQISERHFDRILSYIEHGKREGATLLTGGKPIGDKGYYIEPTIFTNVKEDMIIAKEEIF 314 (414)
Q Consensus 235 l~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~f 314 (414)
|+++++++++|+|. +++++||+++..+++++.+++++++++|+++++||.. .|+|++|||+.+++++|++++||+|
T Consensus 313 l~~~~~~~~~g~p~-~~~~~gpli~~~~~~rv~~~i~~a~~~Ga~v~~gG~~---~g~~~~PTvl~~v~~~~~i~~eEiF 388 (505)
T 3prl_A 313 IKELVEQLTVGSPE-DDADITPVIDEKSAAFIQGLIDDALENGATLLSGNKR---QGNLLSPTLLDDVTPAMRVAWEEPF 388 (505)
T ss_dssp HHHHHHHCCBSCTT-TTCSBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCCE---ETTEECCEEEESCCTTSGGGTSCCC
T ss_pred HHHHHHhcccCCCC-CcCcCCcccCHHHHHHHHHHHHHHHHCCCEEEecCCC---CCceeCCeEeecCCCCChhhcCCcc
Confidence 99999999999999 9999999999999999999999999999999999974 6899999999999999999999999
Q ss_pred cceEEEEeeCCHHHHHHHhhcCCCCceEEEecCCHHHHHHHHHhcceeEEEEcCcCC-CCCCCCcccCCCCCCCccchHH
Q 015042 315 GPVMALMKFKTVEEAIKSANNTQYGLAAGIVTKDLNVANTVSRSIRAGIIWINCYFG-FSMDCPYGGYKMSGFGREYGLE 393 (414)
Q Consensus 315 gPvl~v~~~~~~~eai~~~n~~~~gl~~sv~s~d~~~~~~~~~~l~~g~v~iN~~~~-~~~~~p~gG~~~sG~g~~~g~~ 393 (414)
|||++|++|+|+||||+++|+++|||++||||+|.+.++++++++++|+|+||++.. ..+.+||||+|.||+|+++|.+
T Consensus 389 GPVl~V~~~~~~deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~V~iN~~~~~~~~~~PFGG~k~SG~Gr~~g~~ 468 (505)
T 3prl_A 389 GPVLPIIRVKDANEAISLSNQSDYGLQASIFTKDTDRAINIGKHLEVGTVHINAKTERGPDHFPFLGVKKSGLGVQGIKP 468 (505)
T ss_dssp SSEEEEEEESSHHHHHHHHHTSSEESEEEEECSCHHHHHHHHHTSCSSEEEESSCCCSCSTTSCBCCEETTEESCBSHHH
T ss_pred CcEEEEEEeCCHHHHHHHHhCCCCCeEEEEEcCCHHHHHHHHHHCCeeEEEEcCCCCCCCCCCCcCCcCcCCCCcCccHH
Confidence 999999999999999999999999999999999999999999999999999999876 5578999999999999999999
Q ss_pred HHHhhheeeEEEeeCCC
Q 015042 394 SLYKYLQIKSVVTPIYN 410 (414)
Q Consensus 394 ~~~~~~~~k~i~~~~~~ 410 (414)
|+++|++.|+|+++.+.
T Consensus 469 ~~~~f~~~k~v~~~~~~ 485 (505)
T 3prl_A 469 SLLSMTRERVTVLNLAE 485 (505)
T ss_dssp HHHHTEEEEEEEEEC--
T ss_pred HHHHhhceEEEEEeCCC
Confidence 99999999999887653
|
| >3i44_A Aldehyde dehydrogenase; oxidoreductase, structural genomics, seattle structural genomics center for infectious disease, ssgcid; 2.00A {Bartonella henselae} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-90 Score=705.45 Aligned_cols=401 Identities=35% Similarity=0.597 Sum_probs=376.9
Q ss_pred CHHHHHHHHHhHHHHHHHHHHhcCCChHHHhhchHHHHHHHHHHHHHhhhhhcCcccccCCCccccee-ecCCceEEEEc
Q 015042 1 MWKFADLIEEHVEELAALDALDAGKVYLRAKTAEIPGAAEFLRFFAGAADKIHGEVLKMSSELQGYTL-REPVGVVGHII 79 (414)
Q Consensus 1 L~~~a~~l~~~~~~l~~~~~~etGk~~~e~~~~ei~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~-~~P~Gvv~~i~ 79 (414)
|+++++.|++|+++|++++++|+|||..++...|+..+++.++++++........... ..+...+++ ++|+|||++|+
T Consensus 91 L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a~~~ev~~~~~~~~~~a~~~~~~~~~~~~-~~~~~~~~~~~~P~GVv~~I~ 169 (497)
T 3i44_A 91 VEKILEIYEKRSSDMAKTISMEMGAPIDMALNAQTATGSSHIRNFIKAYKEFSFQEAL-IEGNEQAILHYDAIGVVGLIT 169 (497)
T ss_dssp HHHHHHHHHHTHHHHHHHHHHHHCCCHHHHHHTHHHHHHHHHHHHHHHHHHCCSEEES-STTCSSCEEEEEECCEEEEEC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHhhcccccccc-cCCceeEEEeecCceEEEEEC
Confidence 5789999999999999999999999999876479999999999999877654322111 124557788 99999999999
Q ss_pred CCccchHHHHHhHHHHHhhCCeEEeecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhhHHHhhhCCCccEEEEeCC
Q 015042 80 PWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLTALYYAHLAKLAGIPDGVLNVVPGFGPTAGAAICSHMDIDYVCFTGS 159 (414)
Q Consensus 80 p~n~P~~~~~~~~~~aLaaGN~vv~kps~~~~~~~~~l~~~l~~aG~p~g~v~~v~~~~~~~~~~l~~~~~v~~v~~tGs 159 (414)
|||||+...++++++||++||+||+|||+.+|+++..+++++.++|+|+|++|++++++.++++.|+.||+||+|+||||
T Consensus 170 PwN~P~~~~~~~~a~ALaaGN~VVlKps~~tp~t~~~l~~l~~eaGlP~gvvnvv~g~~~~~g~~L~~hp~v~~I~FTGS 249 (497)
T 3i44_A 170 PWNWPMNQVTLKVIPALLAGCTMVLKPSEIAPLSAMLFAEILDEAALPSGVFNLINGDGANVGSYLSAHPDLEMISFTGS 249 (497)
T ss_dssp CSSSHHHHHHHHHHHHHHHTCEEEEECCTTSCHHHHHHHHHHHHTTCCTTSEEECCCCTTTHHHHHHHCTTCCEEEEESC
T ss_pred CCcchHHHHHHHHHHHHHcCCEEEEECCcccHHHHHHHHHHHHHhCcCCCeEEEEeCCChHHHHHHHhCCCcCEEEEeCc
Confidence 99999999999999999999999999999999999999999999999999999999988889999999999999999999
Q ss_pred cHHHHHHHHHHHhcccceeEEEcCCCCCceEcCCCCHHHHHHHHHHHhhccCCCCcccCceEEEeCchHHHHHHHHHHHH
Q 015042 160 TDVGRLVMQAAAASNLKQVSLELGGKSPLLIFDDADLDTAADVALLGNLYNKGEICVASSRVFVQEGIYDKFEKKLLEKA 239 (414)
Q Consensus 160 ~~~g~~i~~~~a~~~~~~~~~e~gg~~~~iV~~dadl~~aa~~i~~~~~~~~Gq~C~a~~~i~V~~~i~d~f~~~l~~~~ 239 (414)
+.+|+.|++.++ +++||+++|+|||||+||++||| +.|++.+++++|.|+||.|++++|||||+++||+|+++|++++
T Consensus 250 ~~~G~~i~~~aa-~~~k~v~lElGGk~p~IV~~dAD-~~Aa~~i~~~~f~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~ 327 (497)
T 3i44_A 250 TRAGKDISKNAS-NTLKRVCLELGGKGANIIFADAD-IDALQRGVRHCFYNSGQSCNAPTRMLVEQAIYDKAIKTAKDIA 327 (497)
T ss_dssp HHHHHHHHHHHH-TTTCEEEEECCCCCEEEECTTSC-TTHHHHHHHHHHGGGGCCTTCCCEEEEEGGGHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHh-hcCCceeeccCCCCceEECCChh-HHHHHHHHHHHHhcCCCCcccCCEEEEcHHHHHHHHHHHHHHH
Confidence 999999999998 89999999999999999999999 9999999999999999999999999999999999999999999
Q ss_pred hhcccCCCCCCCCcccccCCHHHHHHHHHHHHHHHHcCCEEEeCCc-ccC--CCCceeeeEEEeeCCCcccccccceecc
Q 015042 240 KAWLVGDPFDPTVRQGPQISERHFDRILSYIEHGKREGATLLTGGK-PIG--DKGYYIEPTIFTNVKEDMIIAKEEIFGP 316 (414)
Q Consensus 240 ~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ga~v~~gg~-~~~--~~g~~~~Ptvl~~~~~~~~~~~~E~fgP 316 (414)
+++++|+|.|+++++||+++..+++++++++++++++|+++++||. ... ..|+|++|||+.+++++|++++||+|||
T Consensus 328 ~~~~vG~p~~~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~v~~gG~~~~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGP 407 (497)
T 3i44_A 328 EKTQVGPGHQTGNHIGPVVSKEQYDKIQDLIQSGIDEGATLVTGGTGLPMGMERGYYVRPTVFADVKPHMRIFREEIFGP 407 (497)
T ss_dssp HHCCBCCTTSCSSCBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCSSCCTTCCSSCCCCCEEEESCCTTSHHHHSCCCSS
T ss_pred HhccCCCCCCCCCccCCCcCHHHHHHHHHHHHHHHHCCCEEEECCCcCCCcCCCCcEECCEEEEeCCCCCHHHcCcccCc
Confidence 9999999999999999999999999999999999999999999994 322 2699999999999999999999999999
Q ss_pred eEEEEeeCCHHHHHHHhhcCCCCceEEEecCCHHHHHHHHHhcceeEEEEcCcCCCCCCCCcccCCCCCCCccchHHHHH
Q 015042 317 VMALMKFKTVEEAIKSANNTQYGLAAGIVTKDLNVANTVSRSIRAGIIWINCYFGFSMDCPYGGYKMSGFGREYGLESLY 396 (414)
Q Consensus 317 vl~v~~~~~~~eai~~~n~~~~gl~~sv~s~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~p~gG~~~sG~g~~~g~~~~~ 396 (414)
|++|++|+|+||||+++|+++|||++||||+|.+.++++++++++|+|+||. ....+.+||||+|.||+|+++|++|++
T Consensus 408 Vl~v~~~~~~deAi~~aN~~~~GL~a~v~t~d~~~a~~~a~~l~aG~V~iN~-~~~~~~~PfGG~k~SG~Gr~~G~~gl~ 486 (497)
T 3i44_A 408 VLSLLPFNTEDEAVTLANDTEYGLTNYIQSQDRSKCRRIAAQVRSGMVEVNG-HELPGGSYFGGVKFSGRAREGGLWGIK 486 (497)
T ss_dssp EEEEEEESSHHHHHHHHHCSSCCSEEEEECSCHHHHHHHHHHSCCSEEEETT-CCCCTTCCBCCSGGGCCCCBSHHHHHH
T ss_pred eEEEEecCCHHHHHHHHhCCCCCcEEEEECCCHHHHHHHHHhCCcCeEEECC-CCCCCCCCcCCcCcCcCCccchHHHHH
Confidence 9999999999999999999999999999999999999999999999999994 556678999999999999999999999
Q ss_pred hhheeeEEE
Q 015042 397 KYLQIKSVV 405 (414)
Q Consensus 397 ~~~~~k~i~ 405 (414)
+||+.|+|+
T Consensus 487 ~~t~~K~v~ 495 (497)
T 3i44_A 487 EFLDTKAIS 495 (497)
T ss_dssp TTEEEEEES
T ss_pred HhcceeEEE
Confidence 999999975
|
| >3etf_A Putative succinate-semialdehyde dehydrogenase; center for ST genomics of infectious diseases, oxidoreductase, csgid; 1.85A {Salmonella typhimurium} PDB: 3efv_A | Back alignment and structure |
|---|
Probab=100.00 E-value=2.5e-90 Score=700.09 Aligned_cols=405 Identities=30% Similarity=0.479 Sum_probs=385.1
Q ss_pred CHHHHHHHHHhHHHHHHHHHHhcCCChHHHhhchHHHHHHHHHHHHHhhhhhcCcccccCCCcccceeecCCceEEEEcC
Q 015042 1 MWKFADLIEEHVEELAALDALDAGKVYLRAKTAEIPGAAEFLRFFAGAADKIHGEVLKMSSELQGYTLREPVGVVGHIIP 80 (414)
Q Consensus 1 L~~~a~~l~~~~~~l~~~~~~etGk~~~e~~~~ei~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p 80 (414)
|+++++.|++|+++|++++++|+|||..++. .|+..+++.+++++.+.++..+.......+...+++++|+|||++|+|
T Consensus 57 L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a~-~ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~P 135 (462)
T 3etf_A 57 LRDIGQALRAHAEEMAQCITREMGKPIKQAR-AEVTKSAALCDWYAEHGPAMLNPEPTLVENQQAVIEYRPLGVILAIMP 135 (462)
T ss_dssp HHHHHHHHHHTHHHHHHHHHHHHCCCHHHHH-HHHHHHHHHHHHHHHHHHHHTSCEECSSGGGCEEEEEEECSEEEEECC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCCHHHHH-HHHHHHHHHHHHHHHhHHHhcCCcccCCCCceeEEEeecCcEEEEECC
Confidence 5789999999999999999999999999864 699999999999999887765554222245567889999999999999
Q ss_pred CccchHHHHHhHHHHHhhCCeEEeecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhhHHHhhhCCCccEEEEeCCc
Q 015042 81 WNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLTALYYAHLAKLAGIPDGVLNVVPGFGPTAGAAICSHMDIDYVCFTGST 160 (414)
Q Consensus 81 ~n~P~~~~~~~~~~aLaaGN~vv~kps~~~~~~~~~l~~~l~~aG~p~g~v~~v~~~~~~~~~~l~~~~~v~~v~~tGs~ 160 (414)
||||+...++++++||++||+||+|||+.+|.++..+.+++.++|+|+|++|++++ +.+.++.|+.||++|.|+||||+
T Consensus 136 wN~P~~~~~~~~~~ALaaGN~VvlKps~~tp~~~~~l~~~l~~aglP~gv~~vv~g-~~~~~~~l~~~~~v~~v~fTGS~ 214 (462)
T 3etf_A 136 WNFPLWQVLRGAVPILLAGNSYLLKHAPNVTGCAQMIARILAEAGTPAGVYGWVNA-NNEGVSQMINDPRIAAVTVTGSV 214 (462)
T ss_dssp SSSTTHHHHHHHHHHHHTTCEEEEECCTTCHHHHHHHHHHHHHTTCCBTTEEECCC-CHHHHHHHHTSTTEEEEEEESCH
T ss_pred CchHHHHHHHHHHHHHhcCCEEEEECCCCCcHHHHHHHHHHHHhCCCcCeEEEEEC-CHHHHHHHhcCCCCCEEEEeCCc
Confidence 99999999999999999999999999999999999999999999999999999998 56788999999999999999999
Q ss_pred HHHHHHHHHHHhcccceeEEEcCCCCCceEcCCCCHHHHHHHHHHHhhccCCCCcccCceEEEeCchHHHHHHHHHHHHh
Q 015042 161 DVGRLVMQAAAASNLKQVSLELGGKSPLLIFDDADLDTAADVALLGNLYNKGEICVASSRVFVQEGIYDKFEKKLLEKAK 240 (414)
Q Consensus 161 ~~g~~i~~~~a~~~~~~~~~e~gg~~~~iV~~dadl~~aa~~i~~~~~~~~Gq~C~a~~~i~V~~~i~d~f~~~l~~~~~ 240 (414)
.+|+.|++.++ ++++|+++|+|||||+||++|||++.|++.+++++|.|+||.|+++++||||+++||+|+++|+++++
T Consensus 215 ~~g~~i~~~aa-~~~~~v~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~ 293 (462)
T 3etf_A 215 RAGAAIGAQAG-AALKKCVLELGGSDPFIVLNDADLELAVKAAVAGRYQNTGQVCAAAKRFIVEEGIAQAFTDRFVAAAA 293 (462)
T ss_dssp HHHHHHHHHHH-HTTCCEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCCTTCEEEEEEEHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHh-ccCCceEEEcCCCCccEECCCCCHHHHHHHHHHHHHhcCCCcccCCcEEEEehhHHHHHHHHHHHHHH
Confidence 99999999988 88999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hcccCCCCCCCCcccccCCHHHHHHHHHHHHHHHHcCCEEEeCCcccCCCCceeeeEEEeeCCCcccccccceecceEEE
Q 015042 241 AWLVGDPFDPTVRQGPQISERHFDRILSYIEHGKREGATLLTGGKPIGDKGYYIEPTIFTNVKEDMIIAKEEIFGPVMAL 320 (414)
Q Consensus 241 ~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v 320 (414)
++++|+|.++++++||+++..+++++.+++++++++|+++++||...+..|+|++|||+.+++++|++++||+||||++|
T Consensus 294 ~~~~G~p~~~~~~~gpli~~~~~~~v~~~i~~a~~~ga~~~~gg~~~~~~g~~~~Ptvl~~v~~~~~~~~eE~FGPVl~v 373 (462)
T 3etf_A 294 ALKMGDPLVEENDLGPMARFDLRDELHQQVQASVAEGARLLLGGEKIAGEGNYYAATVLADVTPDMTAFRQELFGPVAAI 373 (462)
T ss_dssp HCCBSCTTSTTCSBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCSBCSSSSCCBCCEEEESCCTTSHHHHSCCCSSEEEE
T ss_pred hhcCCCCccccCcccCCCCHHHHHHHHHHHHHHHHCCCEEEeCCcccCCCCcEEeeEEEECCCCCChhhcCceeCcEEEE
Confidence 99999999999999999999999999999999999999999999866568999999999999999999999999999999
Q ss_pred EeeCCHHHHHHHhhcCCCCceEEEecCCHHHHHHHHHhcceeEEEEcCcCCCCCCCCcccCCCCCCCccchHHHHHhhhe
Q 015042 321 MKFKTVEEAIKSANNTQYGLAAGIVTKDLNVANTVSRSIRAGIIWINCYFGFSMDCPYGGYKMSGFGREYGLESLYKYLQ 400 (414)
Q Consensus 321 ~~~~~~~eai~~~n~~~~gl~~sv~s~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~p~gG~~~sG~g~~~g~~~~~~~~~ 400 (414)
++|+|+||||+++|+++|||++||||+|.+.++++++++++|+|+||++....+.+||||+|.||+|+++|++|+++||+
T Consensus 374 ~~~~~~deAi~~an~~~~gL~a~v~t~d~~~a~~~~~~l~aG~v~vN~~~~~~~~~PfGG~k~SG~G~~~g~~g~~~~~~ 453 (462)
T 3etf_A 374 TVAKDAAHALALANDSEFGLSATIFTADDTLAAEMAARLECGGVFINGYSASDARVAFGGVKKSGFGRELSHFGLHEFCN 453 (462)
T ss_dssp EEESSHHHHHHHHHCSSCCSCEEEECSCHHHHHHHHHHCCSSEEEESSCCCCCTTSCBCCSGGGEECCBSHHHHHHTTEE
T ss_pred EEcCCHHHHHHHHhCCCCCceEEEECCCHHHHHHHHHhCCcceEEECCCCCCCCCCCcCCcCCCCCCccchHHHHHHHhc
Confidence 99999999999999999999999999999999999999999999999988778899999999999999999999999999
Q ss_pred eeEEEeeC
Q 015042 401 IKSVVTPI 408 (414)
Q Consensus 401 ~k~i~~~~ 408 (414)
.|+|+++.
T Consensus 454 ~k~v~~~r 461 (462)
T 3etf_A 454 VQTVWKNR 461 (462)
T ss_dssp EEEEEECC
T ss_pred eeEEEEec
Confidence 99998763
|
| >4e4g_A Methylmalonate-semialdehyde dehydrogenase; structural genomics, protein structure INI nysgrc, PSI-biology; 2.90A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-90 Score=708.61 Aligned_cols=406 Identities=31% Similarity=0.482 Sum_probs=382.2
Q ss_pred CHHHHHHHHHhHHHHHHHHHHhcCCChHHHhhchHHHHHHHHHHHHHhhhhhcCccccc-CCCcccceeecCCceEEEEc
Q 015042 1 MWKFADLIEEHVEELAALDALDAGKVYLRAKTAEIPGAAEFLRFFAGAADKIHGEVLKM-SSELQGYTLREPVGVVGHII 79 (414)
Q Consensus 1 L~~~a~~l~~~~~~l~~~~~~etGk~~~e~~~~ei~~~~~~l~~~a~~~~~~~~~~~~~-~~~~~~~~~~~P~Gvv~~i~ 79 (414)
|+++++.|++|+++|++++++|+|||..++ ..|+..+++.+++++.+.+...+...+. ..+...+.+++|+|||++|+
T Consensus 92 L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea-~~Ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVV~~I~ 170 (521)
T 4e4g_A 92 FMKFVQLLNDNMNELAEMLSREHGKTIDDA-KGDIVRGLEVCEFVIGIPHLQKSEFTEGAGPGIDMYSIRQPVGIGAGIT 170 (521)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHCSCHHHH-HHHHHHHHHHHHHHHTHHHHTCEEEEEEEETTEEEEEEEEECCEEEEEC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCCHHHH-HHHHHHHHHHHHHHHHHHHHhcCcccccCCCCcceeEEEcCCcEEEEEC
Confidence 578999999999999999999999999986 4699999999999998777665543322 23556789999999999999
Q ss_pred CCccchHHHHHhHHHHHhhCCeEEeecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhhHHHhhhCCCccEEEEeCC
Q 015042 80 PWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLTALYYAHLAKLAGIPDGVLNVVPGFGPTAGAAICSHMDIDYVCFTGS 159 (414)
Q Consensus 80 p~n~P~~~~~~~~~~aLaaGN~vv~kps~~~~~~~~~l~~~l~~aG~p~g~v~~v~~~~~~~~~~l~~~~~v~~v~~tGs 159 (414)
|||||+...++++++||++||+||+|||+.+|+++..+++++.++|+|+|++|++++ +.+.++.|+.||+||+|+||||
T Consensus 171 PwN~P~~~~~~~~a~ALaaGN~VVlKpse~tp~t~~~l~~l~~eaGlP~gvv~vv~g-~~~~~~~L~~~p~vd~I~FTGS 249 (521)
T 4e4g_A 171 PFNFPGMIPMWMFAPAIACGNAFILKPSERDPSVPIRLAELMIEAGLPAGILNVVNG-DKGAVDAILTHPDIAAVSFVGS 249 (521)
T ss_dssp CSSCTTHHHHHHHHHHHHTTCEEEEECCTTSTHHHHHHHHHHHHTTCCTTSEEECCC-CHHHHHHHHTCTTCCEEEEESC
T ss_pred CCcchHHHHHHHHHHHHHcCCEEEEECCCcchHHHHHHHHHHHHhCCCcCeEEEEeC-ChHHHHHHHhCCCcCEEEEECC
Confidence 999999999999999999999999999999999999999999999999999999999 4567799999999999999999
Q ss_pred cHHHHHHHHHHHhcccceeEEEcCCCCCceEcCCCCHHHHHHHHHHHhhccCCCCcccCceEEEeCc-hHHHHHHHHHHH
Q 015042 160 TDVGRLVMQAAAASNLKQVSLELGGKSPLLIFDDADLDTAADVALLGNLYNKGEICVASSRVFVQEG-IYDKFEKKLLEK 238 (414)
Q Consensus 160 ~~~g~~i~~~~a~~~~~~~~~e~gg~~~~iV~~dadl~~aa~~i~~~~~~~~Gq~C~a~~~i~V~~~-i~d~f~~~l~~~ 238 (414)
+.+|+.|++.++ ++++|+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|+|||++ +||+|+++|+++
T Consensus 250 ~~vG~~i~~~aa-~~lkpv~lELGGk~p~IV~~dADl~~Aa~~i~~~~f~n~GQ~C~a~~rvlV~~~~i~d~f~~~l~~~ 328 (521)
T 4e4g_A 250 TPIARYVYGTAA-MNGKRAQCFGGAKNHMIIMPDADLDQAANALIGAGYGSAGERCMAISVAVPVGEETANRLIDKLVPM 328 (521)
T ss_dssp HHHHHHHHHHHH-HTTCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCCTTSEEEEEEBSHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHh-hcCCCeeecCCCCCeEEEcCCCCHHHHHHHHHHHHHhCCCCCcccCeEEEEeCchHHHHHHHHHHHH
Confidence 999999999988 889999999999999999999999999999999999999999999999999999 999999999999
Q ss_pred HhhcccCCCCCCCCcccccCCHHHHHHHHHHHHHHHHcCCEEEeCCccc----CCCCceeeeEEEeeCCCccccccccee
Q 015042 239 AKAWLVGDPFDPTVRQGPQISERHFDRILSYIEHGKREGATLLTGGKPI----GDKGYYIEPTIFTNVKEDMIIAKEEIF 314 (414)
Q Consensus 239 ~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ga~v~~gg~~~----~~~g~~~~Ptvl~~~~~~~~~~~~E~f 314 (414)
++++++|+|.++++++||+++..+++++.+++++++++|+++++||... ..+|+|++|||+.+++++|++++||+|
T Consensus 329 ~~~~~vG~~~~~~~~~gpli~~~~~~rv~~~i~~a~~~Ga~v~~gG~~~~~~~~~~g~~~~PTvl~~v~~~~~i~~eEiF 408 (521)
T 4e4g_A 329 VESLRIGPYTDEKADMGPVVTKEAEQRIRSLIDSGIEQGAKLVVDGRDFKLQGYENGHFIGGCLFDDVTPDMDIYKTEIF 408 (521)
T ss_dssp HHTCCBCCTTCTTCSBCCCSCHHHHHHHHHHHHHHHHHTCEEEECCSSCCCTTCTTSCCCCCEEEESCCTTSHHHHSCCC
T ss_pred HHhccCCCCCCccCccCCCCCHHHHHHHHHHHHHHHHCCCEEEecCcccCCCcCCCCcEECCEEEEcCCCCCHhhcCccc
Confidence 9999999999999999999999999999999999999999999999753 247999999999999999999999999
Q ss_pred cceEEEEeeCCHHHHHHHhhcCCCCceEEEecCCHHHHHHHHHhcceeEEEEcCcCCC-CCCCCcccCCCCCCC--ccch
Q 015042 315 GPVMALMKFKTVEEAIKSANNTQYGLAAGIVTKDLNVANTVSRSIRAGIIWINCYFGF-SMDCPYGGYKMSGFG--REYG 391 (414)
Q Consensus 315 gPvl~v~~~~~~~eai~~~n~~~~gl~~sv~s~d~~~~~~~~~~l~~g~v~iN~~~~~-~~~~p~gG~~~sG~g--~~~g 391 (414)
|||++|++|+|+||||+++|+++|||++||||+|.+.++++++++++|+|+||++... .+.+||||+|.||+| +++|
T Consensus 409 GPVl~v~~~~~~deAi~~aN~~~~gLaa~v~t~d~~~a~~~~~~l~aG~V~vN~~~~~~~~~~PfGG~k~SG~G~~~~~G 488 (521)
T 4e4g_A 409 GPVLSVVRARNYEEALSLPMKHEYGNGVAIYTRDGDAARDFASRINIGMVGVNVPIPVPLAYHSFGGWKSSSFGDLNQHG 488 (521)
T ss_dssp SSEEEECCBSSHHHHHHHHHHSSEESEEEEECSBHHHHHHHHHHCCCSEEEESCSSCCCCTTSCBCCEETTEESSCCBSH
T ss_pred CcEEEEEEeCCHHHHHHHHhcCCCCeEEEEECCCHHHHHHHHHhCCeeeEEECCCCCCCCCCCCcCCcccCCCCCCccch
Confidence 9999999999999999999999999999999999999999999999999999998654 478999999999999 7999
Q ss_pred HHHHHhhheeeEEEeeCC
Q 015042 392 LESLYKYLQIKSVVTPIY 409 (414)
Q Consensus 392 ~~~~~~~~~~k~i~~~~~ 409 (414)
++|+++||++|+|+.+++
T Consensus 489 ~~gl~~ft~~K~v~~~~~ 506 (521)
T 4e4g_A 489 TDSIKFWTRTKTITSRWP 506 (521)
T ss_dssp HHHHHHTEEEEEEEECCC
T ss_pred HHHHHHhheEEEEEEecC
Confidence 999999999999998764
|
| >3pqa_A Lactaldehyde dehydrogenase; structural genomics, protein structure initiative, nysgrc, P biology, oxidoreductase; 1.50A {Methanocaldococcus jannaschii} PDB: 3rhd_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.1e-90 Score=701.90 Aligned_cols=399 Identities=34% Similarity=0.567 Sum_probs=378.7
Q ss_pred CHHHHHHHHHhHHHHHHHHHHhcCCChHHHhhchHHHHHHHHHHHHHhhhhhcCcccccCCCcccceeecCCceEEEEcC
Q 015042 1 MWKFADLIEEHVEELAALDALDAGKVYLRAKTAEIPGAAEFLRFFAGAADKIHGEVLKMSSELQGYTLREPVGVVGHIIP 80 (414)
Q Consensus 1 L~~~a~~l~~~~~~l~~~~~~etGk~~~e~~~~ei~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p 80 (414)
|+++++.|++|+++|++++++|+|||..++. .|+..+++.+++++.++++..+...+.. +...+.+++|+|||++|+|
T Consensus 62 L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea~-~Ev~~~~~~~~~~a~~~~~~~~~~~~~~-~~~~~~~~~P~GVv~~I~P 139 (486)
T 3pqa_A 62 LMNIAKQIKEKKEELAKILAIDAGKPIKQAR-VEVERSIGTFKLAAFYVKEHRDEVIPSD-DRLIFTRREPVGIVGAITP 139 (486)
T ss_dssp HHHHHHHHHHTHHHHHHHHHHHHCCCHHHHH-HHHHHHHHHHHHHHHHHHHCCEEEECCT-TEEEEEEEEECSEEEEEEC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCCHHHHH-HHHHHHHHHHHHHHHHHHHhcCceecCC-CceeEEEEccccEEEEECC
Confidence 5789999999999999999999999999864 6999999999999999887765554432 5678899999999999999
Q ss_pred CccchHHHHHhHHHHHhhCCeEEeecCCCChHHHHHHHHHHHHc----CCCCCcEEEEeCCchhhHHHhhhCCCccEEEE
Q 015042 81 WNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLTALYYAHLAKLA----GIPDGVLNVVPGFGPTAGAAICSHMDIDYVCF 156 (414)
Q Consensus 81 ~n~P~~~~~~~~~~aLaaGN~vv~kps~~~~~~~~~l~~~l~~a----G~p~g~v~~v~~~~~~~~~~l~~~~~v~~v~~ 156 (414)
||||+...++++++||++||+||+|||+.+|.++..+++++.++ |+|+|+++++++++.++++.|+.||+||+|+|
T Consensus 140 wN~P~~~~~~~~~~ALaaGN~VVlKps~~tp~t~~~l~~l~~~al~~~GlP~gvv~vv~g~~~~~g~~L~~~p~vd~V~f 219 (486)
T 3pqa_A 140 FNFPLNLSAHKIAPAIATGNVIVHHPSSKAPLVCIELAKIIENALKKYNVPLGVYNLLTGAGEVVGDEIVVNEKVNMISF 219 (486)
T ss_dssp SSSHHHHHHHHHHHHHHTTCEEEEEECTTSCHHHHHHHHHHHHHHHHTTCCGGGEEECCSCTTTHHHHHHHCTTCCEEEE
T ss_pred CchHHHHHHHHHHHHHHcCCEEEEECCCCchHHHHHHHHHHHHHHHhcCCCCCeEEEEeCCchHHHHHHHhCCCccEEEE
Confidence 99999999999999999999999999999999999999999999 99999999999987788999999999999999
Q ss_pred eCCcHHHHHHHHHHHhcccceeEEEcCCCCCceEcCCCCHHHHHHHHHHHhhccCCCCcccCceEEEeCchHHHHHHHHH
Q 015042 157 TGSTDVGRLVMQAAAASNLKQVSLELGGKSPLLIFDDADLDTAADVALLGNLYNKGEICVASSRVFVQEGIYDKFEKKLL 236 (414)
Q Consensus 157 tGs~~~g~~i~~~~a~~~~~~~~~e~gg~~~~iV~~dadl~~aa~~i~~~~~~~~Gq~C~a~~~i~V~~~i~d~f~~~l~ 236 (414)
|||+.+|+.|++.++ ++|+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|+
T Consensus 220 TGS~~~g~~i~~~aa---~~~v~lELGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~ 296 (486)
T 3pqa_A 220 TGSSKVGELITKKAG---FKKIALELGGVNPNIVLKDADLNKAVNALIKGSFIYAGQVCISVGMILVDESIADKFIEMFV 296 (486)
T ss_dssp ESCHHHHHHHHHHCC---SSEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCSTTSEEEEEEEGGGHHHHHHHHH
T ss_pred ECChHHHHHHHHHcC---CCceeeccCCcCcEEEcCCCCHHHHHHHHHHHHHhcCCCCccCCcEEEEeHHHHHHHHHHHH
Confidence 999999999998864 89999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhhcccCCCCCCCCcccccCCHHHHHHHHHHHHHHHHcCCEEEeCCcccCCCCceeeeEEEeeCCCcccccccceecc
Q 015042 237 EKAKAWLVGDPFDPTVRQGPQISERHFDRILSYIEHGKREGATLLTGGKPIGDKGYYIEPTIFTNVKEDMIIAKEEIFGP 316 (414)
Q Consensus 237 ~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgP 316 (414)
++++++++|+|+++++++||+++..+++++.+++++++++|+++++||.. .|+|++|||+ +++++|++++||+|||
T Consensus 297 ~~~~~~~~g~p~~~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~v~~gG~~---~g~~~~Ptvl-~v~~~~~i~~eEiFGP 372 (486)
T 3pqa_A 297 NKAKVLNVGNPLDEKTDVGPLISVEHAEWVEKVVEKAIDEGGKLLLGGKR---DKALFYPTIL-EVDRDNILCKTETFAP 372 (486)
T ss_dssp HHHHTCCBSCTTSTTCSBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCCE---ETTEECCEEE-ECCTTSGGGTCCCCSS
T ss_pred HHHHhcccCCCCcCCCCcCCCCCHHHHHHHHHHHHHHHHCCCEEEecCCC---CCcEeccEEE-eCCCCChhhccccccc
Confidence 99999999999999999999999999999999999999999999999975 6899999999 9999999999999999
Q ss_pred eEEEEeeCCHHHHHHHhhcCCCCceEEEecCCHHHHHHHHHhcceeEEEEcCcCCC-CCCCCcccCCCCCCCccchHHHH
Q 015042 317 VMALMKFKTVEEAIKSANNTQYGLAAGIVTKDLNVANTVSRSIRAGIIWINCYFGF-SMDCPYGGYKMSGFGREYGLESL 395 (414)
Q Consensus 317 vl~v~~~~~~~eai~~~n~~~~gl~~sv~s~d~~~~~~~~~~l~~g~v~iN~~~~~-~~~~p~gG~~~sG~g~~~g~~~~ 395 (414)
|++|++|+| ||||+++|+++|||++||||+|.+.++++++++++|+|+||++... .+.+||||+|.||+|+++|++|+
T Consensus 373 Vl~v~~~~~-deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~v~vN~~~~~~~~~~PfGG~k~SG~Gr~~g~~gl 451 (486)
T 3pqa_A 373 VIPIIRTNE-EEMIDIANSTEYGLHSAIFTNDINKSLKFAENLEFGGVVINDSSLFRQDNMPFGGVKKSGLGREGVKYAM 451 (486)
T ss_dssp EEEEEEECH-HHHHHHHTCSSCCSEEEEECSBHHHHHHHHHHSCSSEEEESSCTTCCCTTSCBCCSGGGEESCBSHHHHH
T ss_pred EEEEEEEcH-HHHHHHHhcCCCCcEEEEECCCHHHHHHHHHhCCcceEEEeCCCCcCCCCCCCCCcCcCcCCCCCcHHHH
Confidence 999999999 9999999999999999999999999999999999999999998653 35899999999999999999999
Q ss_pred HhhheeeEEEeeCC
Q 015042 396 YKYLQIKSVVTPIY 409 (414)
Q Consensus 396 ~~~~~~k~i~~~~~ 409 (414)
++||+.|+|+++..
T Consensus 452 ~~f~~~k~v~~~~~ 465 (486)
T 3pqa_A 452 EEMSNIKTIIISKA 465 (486)
T ss_dssp HHTEEEEEEEEEC-
T ss_pred HHhhceEEEEEcCC
Confidence 99999999988764
|
| >2w8n_A Succinate-semialdehyde dehydrogenase, mitochondrial; mitochondrion, oxidoreductase, transit peptide, disease mutation, SSA, NAD, ssadh; 2.00A {Homo sapiens} PDB: 2w8o_A 2w8p_A 2w8q_A 2w8r_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-90 Score=704.89 Aligned_cols=404 Identities=38% Similarity=0.661 Sum_probs=383.7
Q ss_pred CHHHHHHHHHhHHHHHHHHHHhcCCChHHHhhchHHHHHHHHHHHHHhhhhhcCccccc-CCCcccceeecCCceEEEEc
Q 015042 1 MWKFADLIEEHVEELAALDALDAGKVYLRAKTAEIPGAAEFLRFFAGAADKIHGEVLKM-SSELQGYTLREPVGVVGHII 79 (414)
Q Consensus 1 L~~~a~~l~~~~~~l~~~~~~etGk~~~e~~~~ei~~~~~~l~~~a~~~~~~~~~~~~~-~~~~~~~~~~~P~Gvv~~i~ 79 (414)
|+++++.|++|+++|++++++|+|||..++. .|+..+++.+++++.+.++..+...+. ..+...+.+++|+|||++|+
T Consensus 76 L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea~-~ev~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~~P~GVv~~I~ 154 (487)
T 2w8n_A 76 LRKWYNLMIQNKDDLARIITAESGKPLKEAH-GEILYSAFFLEWFSEEARRVYGDIIHTPAKDRRALVLKQPIGVAAVIT 154 (487)
T ss_dssp HHHHHHHHHHTHHHHHHHHHHHHCCCHHHHH-HHHHHHHHHHHHHHHHGGGCCCEEECCSCTTCEEEEEEEECCEEEEEC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCCHHHHH-HHHHHHHHHHHHHHHHHHHhcCcccccCCCCceeEEEEecceEEEEEC
Confidence 5789999999999999999999999999865 599999999999999888766655443 23456788999999999999
Q ss_pred CCccchHHHHHhHHHHHhhCCeEEeecCCCChHHHHHHHHHHHHcCCCCCcEEEEe---CCchhhHHHhhhCCCccEEEE
Q 015042 80 PWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLTALYYAHLAKLAGIPDGVLNVVP---GFGPTAGAAICSHMDIDYVCF 156 (414)
Q Consensus 80 p~n~P~~~~~~~~~~aLaaGN~vv~kps~~~~~~~~~l~~~l~~aG~p~g~v~~v~---~~~~~~~~~l~~~~~v~~v~~ 156 (414)
|||||+...++++++||++||+||+|||+.+|.++..+++++.++|+|+|++|+++ +.+.+.++.|+.||+||+|.|
T Consensus 155 PwN~P~~~~~~~~~~ALaaGN~VVlKps~~tp~t~~~l~~l~~~aGlP~gvv~vv~~~~g~~~~~~~~L~~~~~v~~V~f 234 (487)
T 2w8n_A 155 PWNFPSAMITRKVGAALAAGCTVVVKPAEDTPFSALALAELASQAGIPSGVYNVIPCSRKNAKEVGEAICTDPLVSKISF 234 (487)
T ss_dssp CSSSTTHHHHHHHHHHHHHTCEEEEECCTTCCHHHHHHHHHHHHHTCCTTSEEECCCCHHHHHHHHHHHTTCTTEEEEEE
T ss_pred CCcchHHHHHHHHHHHHHcCCEEEEECCCcchHHHHHHHHHHHHhCCCCCeEEEEecCCCCcHHHHHHHHhCCCcCEEEE
Confidence 99999999999999999999999999999999999999999999999999999999 766778999999999999999
Q ss_pred eCCcHHHHHHHHHHHhcccceeEEEcCCCCCceEcCCCCHHHHHHHHHHHhhccCCCCcccCceEEEeCchHHHHHHHHH
Q 015042 157 TGSTDVGRLVMQAAAASNLKQVSLELGGKSPLLIFDDADLDTAADVALLGNLYNKGEICVASSRVFVQEGIYDKFEKKLL 236 (414)
Q Consensus 157 tGs~~~g~~i~~~~a~~~~~~~~~e~gg~~~~iV~~dadl~~aa~~i~~~~~~~~Gq~C~a~~~i~V~~~i~d~f~~~l~ 236 (414)
|||+.+|+.|++.++ ++++|+++|+|||||+||++|||++.|++.+++++|.|+||.|+++++||||+++||+|+++|+
T Consensus 235 TGS~~~g~~i~~~aa-~~~~pv~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~ 313 (487)
T 2w8n_A 235 TGSTTTGKILLHHAA-NSVKRVSMELGGLAPFIVFDSANVDQAVAGAMASKFRNTGQTCVCSNQFLVQRGIHDAFVKAFA 313 (487)
T ss_dssp EECHHHHHHHHHHHH-TTTCEEEEEECEEEEEEECTTSCHHHHHHHHHHHHTCCCSCCCSEEEEEEEEHHHHHHHHHHHH
T ss_pred eCCHHHHHHHHHHHh-ccCCcEEEecCCCCeEEECCCCCHHHHHHHHHHHHHhCCCCccccCCEEEEcccHHHHHHHHHH
Confidence 999999999999998 8999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhh-cccCCCCCCCCcccccCCHHHHHHHHHHHHHHHHcCCEEEeCCcccCCCCc-eeeeEEEeeCCCccccccccee
Q 015042 237 EKAKA-WLVGDPFDPTVRQGPQISERHFDRILSYIEHGKREGATLLTGGKPIGDKGY-YIEPTIFTNVKEDMIIAKEEIF 314 (414)
Q Consensus 237 ~~~~~-~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~~~g~-~~~Ptvl~~~~~~~~~~~~E~f 314 (414)
+.+++ +++|+|.++++++||+++..+++++.+++++++++|+++++||... ..|+ |++|||+.+++++|++++||+|
T Consensus 314 ~~~~~~~~~G~p~~~~~~~gpli~~~~~~rv~~~i~~a~~~Ga~~~~gg~~~-~~g~~~~~Ptvl~~v~~~~~i~~eEiF 392 (487)
T 2w8n_A 314 EAMKKNLRVGNGFEEGTTQGPLINEKAVEKVEKQVNDAVSKGATVVTGGKRH-QLGKNFFEPTLLCNVTQDMLCTHEETF 392 (487)
T ss_dssp HHHHHHCCBSCTTSTTCCBCCCSSHHHHHHHHHHHHHHHTTTCEEEECCSBC-TTCTTCBCCEEEEEECGGGGTTCTTCC
T ss_pred HHHHhhcccCCcccccCcccCCCCHHHHHHHHHHHHHHHHCCCEEEeCCccC-CCCCceECCEEEecCCCcchhhhcccc
Confidence 99999 9999999999999999999999999999999999999999999764 2688 9999999999999999999999
Q ss_pred cceEEEEeeCCHHHHHHHhhcCCCCceEEEecCCHHHHHHHHHhcceeEEEEcCcCCCCCCCCcccCCCCCCCccchHHH
Q 015042 315 GPVMALMKFKTVEEAIKSANNTQYGLAAGIVTKDLNVANTVSRSIRAGIIWINCYFGFSMDCPYGGYKMSGFGREYGLES 394 (414)
Q Consensus 315 gPvl~v~~~~~~~eai~~~n~~~~gl~~sv~s~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~p~gG~~~sG~g~~~g~~~ 394 (414)
|||++|++|+|+||||+++|+++|||++||||+|.+.++++++++++|+|+||++....+.+||||+|.||+|+++|.+|
T Consensus 393 GPVl~v~~~~~~~eAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~v~vN~~~~~~~~~PfGG~~~SG~G~~~G~~~ 472 (487)
T 2w8n_A 393 GPLAPVIKFDTEEEAIAIANAADVGLAGYFYSQDPAQIWRVAEQLEVGMVGVNEGLISSVECPFGGVKQSGLGREGSKYG 472 (487)
T ss_dssp SSEEEEEEESCHHHHHHHHTCTTCCSEEEEECCCHHHHHHHHHHSCSSEEEESCSCCCCTTSCBCCSGGGEESCBSTTTG
T ss_pred cceEEEEEeCCHHHHHHHHhCCCCCceEEEeCCCHHHHHHHHHhCCeeeEEEcCCCCCCCCCCCCCCCCCCcCCCchHHH
Confidence 99999999999999999999999999999999999999999999999999999988777789999999999999999999
Q ss_pred HHhhheeeEEEee
Q 015042 395 LYKYLQIKSVVTP 407 (414)
Q Consensus 395 ~~~~~~~k~i~~~ 407 (414)
+++|++.|+|+.+
T Consensus 473 l~~f~~~k~v~~~ 485 (487)
T 2w8n_A 473 IDEYLELKYVCYG 485 (487)
T ss_dssp GGGGEEEEEEEEC
T ss_pred HHHhcCccEEEEe
Confidence 9999999999875
|
| >3r64_A NAD dependent benzaldehyde dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.57A {Corynebacterium glutamicum} | Back alignment and structure |
|---|
Probab=100.00 E-value=6.1e-90 Score=703.14 Aligned_cols=408 Identities=34% Similarity=0.543 Sum_probs=367.7
Q ss_pred CHHHHHHHHHhHHHHHHHHHHhcCCChHHHhhchHHHHHHHHHHHHHhhhhhcCcccccC--CCcccceeecCCceEEEE
Q 015042 1 MWKFADLIEEHVEELAALDALDAGKVYLRAKTAEIPGAAEFLRFFAGAADKIHGEVLKMS--SELQGYTLREPVGVVGHI 78 (414)
Q Consensus 1 L~~~a~~l~~~~~~l~~~~~~etGk~~~e~~~~ei~~~~~~l~~~a~~~~~~~~~~~~~~--~~~~~~~~~~P~Gvv~~i 78 (414)
|+++++.|++|+++|++++++|+|||..++. .|+..+++.+++++.+.++..+ ..+.. .+...+++++|+|||++|
T Consensus 78 L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a~-~Ev~~~~~~~~~~a~~~~~~~~-~~~~~~~~~~~~~~~~~P~GVv~~I 155 (508)
T 3r64_A 78 IYRAAELLEEHREEIVEWLIKESGSTRSKAN-LEITLAGNITKESASFPGRVHG-RISPSNTPGKENRVYRVAKGVVGVI 155 (508)
T ss_dssp HHHHHHHHHHTHHHHHHHHHHTSCCCHHHHH-HHHHHHHHHHHHHTTSTTTCCE-EEECCSSTTEEEEEEEEECSEEEEE
T ss_pred HHHHHHHHHHhHHHHHHHHHHHcCCCHHHHH-HHHHHHHHHHHHHHHHhhhhcC-cccccCCCCceeEEEEecceEEEEE
Confidence 5789999999999999999999999999865 5999999999999988876655 44432 346788999999999999
Q ss_pred cCCccchHHHHHhHHHHHhhCCeEEeecCCCChHHH-HHHHHHHHHcCCCCCcEEEEeCCchhhHHHhhhCCCccEEEEe
Q 015042 79 IPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLTA-LYYAHLAKLAGIPDGVLNVVPGFGPTAGAAICSHMDIDYVCFT 157 (414)
Q Consensus 79 ~p~n~P~~~~~~~~~~aLaaGN~vv~kps~~~~~~~-~~l~~~l~~aG~p~g~v~~v~~~~~~~~~~l~~~~~v~~v~~t 157 (414)
+|||||+...++++++||++||+||+|||+.+|.++ ..+.+++.++|+|+|+++++++++.+.++.|+.||+||+|.||
T Consensus 156 ~PwN~P~~~~~~~~~~ALaaGN~VVlKps~~tp~t~~~~l~~ll~~aGlP~gvv~vv~g~~~~~g~~L~~~p~vd~I~fT 235 (508)
T 3r64_A 156 SPWNFPLNLSIRSVAPALAVGNAVVIKPASDTPVTGGVIPARIFEEAGVPAGVISTVAGAGSEIGDHFVTHAVPKLISFT 235 (508)
T ss_dssp CCSSSHHHHHHHHHHHHHHTTCEEEEECCTTCHHHHTHHHHHHHHTTTCCTTTEEECCCCTTTTHHHHHHCSSCSEEEEE
T ss_pred CCCcchHHHHHHHHHHHHhcCCEEEEECCCCChHHHHHHHHHHHHHhCcCcCeEEEEeCCCHHHHHHHhhCCCccEEEEE
Confidence 999999999999999999999999999999999999 9999999999999999999999778899999999999999999
Q ss_pred CCcHHHHHHHHHHHhc--ccceeEEEcCCCCCceEcCCCCHHHHHHHHHHHhhccCCCCcccCceEEEeCchHHHHHHHH
Q 015042 158 GSTDVGRLVMQAAAAS--NLKQVSLELGGKSPLLIFDDADLDTAADVALLGNLYNKGEICVASSRVFVQEGIYDKFEKKL 235 (414)
Q Consensus 158 Gs~~~g~~i~~~~a~~--~~~~~~~e~gg~~~~iV~~dadl~~aa~~i~~~~~~~~Gq~C~a~~~i~V~~~i~d~f~~~l 235 (414)
||+.+|+.|++.++ + +++|+++|+|||||+||++|||++.|++.+++++|.|+||.|+++++||||+++||+|+++|
T Consensus 236 GS~~~g~~i~~~aa-~~~~l~~v~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l 314 (508)
T 3r64_A 236 GSTPVGRRVGELAI-NGGPMKTVALELGGNAPFVVLADADIDAAAQAAAVGAFLHQGQICMSINRVIVDAAVHDEFLEKF 314 (508)
T ss_dssp SCHHHHHHHHHHHH-SSSSCCEEEEECCCCCEEEECTTSCHHHHHHHHHHHHHTSTTCTTTCCSEEEEEHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHhh-cccCCCceEeecCCcCceEECCCCCHHHHHHHHHHHHHhcCCCCcccCcEEEEehhHHHHHHHHH
Confidence 99999999999987 6 89999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhhcccCCCCCCCCcccccCCHHHHHHHHHHHHHHHHcCCEEEeCCcccCCCCceeeeEEEeeCCCcccccccceec
Q 015042 236 LEKAKAWLVGDPFDPTVRQGPQISERHFDRILSYIEHGKREGATLLTGGKPIGDKGYYIEPTIFTNVKEDMIIAKEEIFG 315 (414)
Q Consensus 236 ~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fg 315 (414)
+++++++++|+|.++++++||+++..+++++++++++++++|+++++||.. .|+|+.|||+.+++++|++++||+||
T Consensus 315 ~~~~~~~~~G~p~~~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~v~~gG~~---~g~~~~Ptvl~~v~~~~~i~~eEiFG 391 (508)
T 3r64_A 315 VEAVKNIPTGDPSAEGTLVGPVINDSQLSGLKEKIELAKKEGATVQVEGPI---EGRLVHPHVFSDVTSDMEIAREEIFG 391 (508)
T ss_dssp HHHHHTCCBSCTTSSSCCBCCCSCHHHHHHHHHHHHHHHTTTCEEEECCCE---ETTEECCEEEEEECTTSGGGTSCCCS
T ss_pred HHHHHhccCCCCccCCCcccCCCCHHHHHHHHHHHHHHHHcCCEEEecCCC---CCcEEecEEEecCCCCChhhcccccC
Confidence 999999999999999999999999999999999999999999999999976 68999999999999999999999999
Q ss_pred ceEEEEeeCCHHHHHHHhhcCCCCceEEEecCCHHHHHHHHHhcceeEEEEcCcCCC-CCCCCcccCCCCCCCccchHHH
Q 015042 316 PVMALMKFKTVEEAIKSANNTQYGLAAGIVTKDLNVANTVSRSIRAGIIWINCYFGF-SMDCPYGGYKMSGFGREYGLES 394 (414)
Q Consensus 316 Pvl~v~~~~~~~eai~~~n~~~~gl~~sv~s~d~~~~~~~~~~l~~g~v~iN~~~~~-~~~~p~gG~~~sG~g~~~g~~~ 394 (414)
||++|++|+|+||||+++|+++|||++||||+|.+.++++++++++|+|+||++... .+.+||||+|.||+|+++|++|
T Consensus 392 PVl~v~~~~~~deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~V~vN~~~~~~~~~~PfGG~~~SG~Gr~~G~~~ 471 (508)
T 3r64_A 392 PLISVLKADDEAHAAELANASDFGLSAAVWSKDIDRAAQFALQIDSGMVHINDLTVNDEPHVMFGGSKNSGLGRFNGDWA 471 (508)
T ss_dssp SEEEEEEESSHHHHHHHHTSSSCCSCEEEECSCHHHHHHHHTTSCSSEEEECC--------------------CCCHHHH
T ss_pred ceEEEEEeCCHHHHHHHHhCCCCCcEEEEEcCCHHHHHHHHHhCCcceEEEcCCCCCCCCCCCcCCcCCCCCCcCccHHH
Confidence 999999999999999999999999999999999999999999999999999998754 6789999999999999999999
Q ss_pred HHhhheeeEEEeeCC-----CCCCC
Q 015042 395 LYKYLQIKSVVTPIY-----NSPWL 414 (414)
Q Consensus 395 ~~~~~~~k~i~~~~~-----~~~~~ 414 (414)
+++||++|+|+++.. ...||
T Consensus 472 l~~ft~~k~v~~~~~~~~~~~~~~~ 496 (508)
T 3r64_A 472 IEEFTTDRWIGIKRSAENLYFQSHH 496 (508)
T ss_dssp HHHTEEEEEEEEECCSTTCCCC---
T ss_pred HHHhhceEEEEEecccchhcchhhc
Confidence 999999999988764 35565
|
| >1uxt_A Glyceraldehyde-3-phosphate dehydrogenase (NADP+); GAPN, ALDH, glucose 1-phosphate, glycolysis, regulation, catatysis, oxidoreductase; HET: G1P NAD; 2.2A {Thermoproteus tenax} SCOP: c.82.1.1 PDB: 1uxp_A* 1uxq_A* 1uxr_A* 1uxn_A* 1uxu_A* 1uxv_A* 1ky8_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.9e-90 Score=702.93 Aligned_cols=405 Identities=32% Similarity=0.478 Sum_probs=382.1
Q ss_pred CHHHHHHHHHhHHHHHHHHHHhcCCChHHHhhchHHHHHHHHHHHHHhhhhhcCcccccC--C---CcccceeecCCceE
Q 015042 1 MWKFADLIEEHVEELAALDALDAGKVYLRAKTAEIPGAAEFLRFFAGAADKIHGEVLKMS--S---ELQGYTLREPVGVV 75 (414)
Q Consensus 1 L~~~a~~l~~~~~~l~~~~~~etGk~~~e~~~~ei~~~~~~l~~~a~~~~~~~~~~~~~~--~---~~~~~~~~~P~Gvv 75 (414)
|+++++.|++|+++|++++++|+|||..++. .|+..+++.+++++.++++..+..++.. . +...+.+++|+|||
T Consensus 83 L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea~-~Ev~~~~~~l~~~a~~~~~~~g~~~~~~~~~~~~~~~~~~~~~P~GVv 161 (501)
T 1uxt_A 83 LRKAADIIERNLDVFAEVLVMNAGKPKSAAV-GEVKAAVDRLRLAELDLKKIGGDYIPGDWTYDTLETEGLVRREPLGVV 161 (501)
T ss_dssp HHHHHHHHHHTHHHHHHHHHHHHCCCHHHHH-HHHHHHHHHHHTGGGGGGGTCCEEEESTTSSTTTTEEEEEEEEECSEE
T ss_pred HHHHHHHHHHhHHHHHHHHHHHhCCCHHHHH-HHHHHHHHHHHHHHHHHHHhcCccccccccCCCcCceEEEEEeeccEE
Confidence 5789999999999999999999999999865 7999999999999998887766554432 2 23568999999999
Q ss_pred EEEcCCccchHHHHHhHHHHHhhCCeEEeecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhhHHHhhhCCCccEEE
Q 015042 76 GHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLTALYYAHLAKLAGIPDGVLNVVPGFGPTAGAAICSHMDIDYVC 155 (414)
Q Consensus 76 ~~i~p~n~P~~~~~~~~~~aLaaGN~vv~kps~~~~~~~~~l~~~l~~aG~p~g~v~~v~~~~~~~~~~l~~~~~v~~v~ 155 (414)
++|+|||||+...++++++||++||+||+|||+.+|+++..+++++.++|+|+|++|++++.+ ++++.|+.||+||+|+
T Consensus 162 ~~I~PwN~P~~~~~~~~~~ALaaGN~VVlKps~~tp~t~~~l~~l~~eaGlP~gvv~vv~g~~-~~g~~L~~~~~vd~I~ 240 (501)
T 1uxt_A 162 AAITPFNYPLFDAVNKITYSFIYGNAVVVKPSISDPLPAAMAVKALLDAGFPPDAIALLNLPG-KEAEKIVADDRVAAVS 240 (501)
T ss_dssp EEECCTTSTTHHHHHHHHHHHHTTCEEEEECCTTSCHHHHHHHHHHHHTTCCTTSEEECCCCH-HHHHHHHTCTTCCEEE
T ss_pred EEECCCccHHHHHHHHHHHHHHcCCEEEEeCCCCchHHHHHHHHHHHHhCCCcCeEEEEeCCc-HHHHHHHhCCCcCEEE
Confidence 999999999999999999999999999999999999999999999999999999999999976 8899999999999999
Q ss_pred EeCCcHHHHHHHHHHHhcccceeEEEcCCCCCceEcCCCCHHHHHHHHHHHhhccCCCCcccCceEEEeCchHHHHHHHH
Q 015042 156 FTGSTDVGRLVMQAAAASNLKQVSLELGGKSPLLIFDDADLDTAADVALLGNLYNKGEICVASSRVFVQEGIYDKFEKKL 235 (414)
Q Consensus 156 ~tGs~~~g~~i~~~~a~~~~~~~~~e~gg~~~~iV~~dadl~~aa~~i~~~~~~~~Gq~C~a~~~i~V~~~i~d~f~~~l 235 (414)
||||+.+|+.|++.++ ++|+++|+|||||+||++|||++.|++.+++++|.|+||.|+++++||||++++|+|+++|
T Consensus 241 FTGS~~~G~~i~~~aa---l~~v~lELGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l 317 (501)
T 1uxt_A 241 FTGSTEVGERVVKVGG---VKQYVMELGGGDPAIVLEDADLDLAADKIARGIYSYAGQRCDAIKLVLAERPVYGKLVEEV 317 (501)
T ss_dssp EESCHHHHHHHHHHHC---SSEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCSTTCEEEEEEEHHHHHHHHHHH
T ss_pred EeCcHHHHHHHHHhcC---CCeEEEEcCCcCeEEECCCCCHHHHHHHHHHHHhcCCCCCCcCCcEEEeccchHHHHHHHH
Confidence 9999999999998864 8999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhhcccCCCCCCCCcccccCCHHHHHHHHHHHHHHHHcCCEEEeCCcccCCCC-ceeeeEEEeeCC---Cccccccc
Q 015042 236 LEKAKAWLVGDPFDPTVRQGPQISERHFDRILSYIEHGKREGATLLTGGKPIGDKG-YYIEPTIFTNVK---EDMIIAKE 311 (414)
Q Consensus 236 ~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~~~g-~~~~Ptvl~~~~---~~~~~~~~ 311 (414)
++.++++++|+|.++++++||+++..+++++.+++++++++|+++++||.. .| +|++|||+.+++ ++|.+++|
T Consensus 318 ~~~~~~~~~g~p~~~~~~~Gpli~~~~~~rv~~~i~~a~~~Ga~~~~gG~~---~g~~~~~Ptvl~~v~~~~~~~~i~~e 394 (501)
T 1uxt_A 318 AKRLSSLRVGDPRDPTVDVGPLISPSAVDEMMAAIEDAVEKGGRVLAGGRR---LGPTYVQPTFVEAPADRVKDMVLYKR 394 (501)
T ss_dssp HHHHHTCCBSCTTSTTCSBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCCB---CSSSCBCCEEEECCHHHHTTSHHHHS
T ss_pred HHHHHhccCCCccccCCcccCCCCHHHHHHHHHHHHHHHHCCCEEEeCCcc---CCCceECCEEEeCCCCCCCcCHHHhC
Confidence 999999999999999999999999999999999999999999999999976 57 999999999999 99999999
Q ss_pred ceecceEEEEeeCCHHHHHHHhhcCCCCceEEEecCCHHHHHHHHHhcceeEEEEcCc-CCCCCCCCcccCCCCCCCccc
Q 015042 312 EIFGPVMALMKFKTVEEAIKSANNTQYGLAAGIVTKDLNVANTVSRSIRAGIIWINCY-FGFSMDCPYGGYKMSGFGREY 390 (414)
Q Consensus 312 E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~sv~s~d~~~~~~~~~~l~~g~v~iN~~-~~~~~~~p~gG~~~sG~g~~~ 390 (414)
|+||||++|++|+|+||||+++|+++|||++||||+|.+.++++++++++|+|+||++ ....+.+||||+|.||+|+++
T Consensus 395 EiFGPVl~v~~~~~~deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~~G~V~iN~~~~~~~~~~PfGG~k~SG~G~~~ 474 (501)
T 1uxt_A 395 EVFAPVALAVEVKDLDQAIELANGRPYGLDAAVFGRDVVKIRRAVRLLEVGAIYINDMPRHGIGYYPFGGRKKSGVFREG 474 (501)
T ss_dssp CCCSSEEEEEEESSHHHHHHHHHTSSEESEEEEECCCHHHHHHHHHHCCSSEEEETSCCCCTTSSSCBCCEETTEESCBS
T ss_pred cccCceEEEEeeCCHHHHHHHHhcCCCCcEEEEeCCCHHHHHHHHHhCCEeeEEEeCCCCCCCCCCCCCCcCCCCCCccC
Confidence 9999999999999999999999999999999999999999999999999999999998 566788999999999999999
Q ss_pred hHHHHHhhheeeEEEeeCC-CCCC
Q 015042 391 GLESLYKYLQIKSVVTPIY-NSPW 413 (414)
Q Consensus 391 g~~~~~~~~~~k~i~~~~~-~~~~ 413 (414)
|.+|+++||++|+|+.+.. ..+|
T Consensus 475 G~~~l~~f~~~k~v~~~~~~~~~~ 498 (501)
T 1uxt_A 475 IGYAVEAVTAYKTIVFNYKGKGVW 498 (501)
T ss_dssp TTTTHHHHEEEEEEEEECTTSSSS
T ss_pred hHHHHHHhCceeEEEEecCCCccc
Confidence 9999999999999988764 3444
|
| >4dng_A Uncharacterized aldehyde dehydrogenase ALDY; structural genomics, protein structure initiative, nysgrc, P biology; 2.50A {Bacillus subtilis} | Back alignment and structure |
|---|
Probab=100.00 E-value=8.9e-90 Score=699.62 Aligned_cols=406 Identities=29% Similarity=0.479 Sum_probs=361.9
Q ss_pred CHHHHHHHHHhHHHHHHHHHHhcCCChHHHhhchHHHHHHHHHHHHHhhhhhcCcccccC--CCcccceeecCCceEEEE
Q 015042 1 MWKFADLIEEHVEELAALDALDAGKVYLRAKTAEIPGAAEFLRFFAGAADKIHGEVLKMS--SELQGYTLREPVGVVGHI 78 (414)
Q Consensus 1 L~~~a~~l~~~~~~l~~~~~~etGk~~~e~~~~ei~~~~~~l~~~a~~~~~~~~~~~~~~--~~~~~~~~~~P~Gvv~~i 78 (414)
|+++++.|++|+++|++++++|+|||..++.. |+..+++.+++++.+.++..+...+.. .+...+.+++|+|||++|
T Consensus 72 L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a~~-ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I 150 (485)
T 4dng_A 72 LQKARGYLHENRDDIIMMIARETGGTIIKSTI-ELEQTIAILDEAMTYTGELGGVKEVPSDIEGKTNKIYRLPLGVISSI 150 (485)
T ss_dssp HHHHHHHHHHTHHHHHHHHHHHHCCCHHHHHH-HHHHHHHHHHHHHHHGGGCSCEECCCCSSTTEEEEEEEEECCEEEEE
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHH-HHHHHHHHHHHHHHHHHHhCCeeccccCCCCceEEEEEecceEEEEE
Confidence 57899999999999999999999999998754 999999999999999887666544432 346688999999999999
Q ss_pred cCCccchHHHHHhHHHHHhhCCeEEeecCCCChHHH-HHHHHHHHHcCCCCCcEEEEeCCchhhHHHhhhCCCccEEEEe
Q 015042 79 IPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLTA-LYYAHLAKLAGIPDGVLNVVPGFGPTAGAAICSHMDIDYVCFT 157 (414)
Q Consensus 79 ~p~n~P~~~~~~~~~~aLaaGN~vv~kps~~~~~~~-~~l~~~l~~aG~p~g~v~~v~~~~~~~~~~l~~~~~v~~v~~t 157 (414)
+|||||+...++++++||++||+||+|||+.+|.++ ..+.+++.++|+|+|++|++++++.+.++.|+.||++|+|.||
T Consensus 151 ~PwN~P~~~~~~~~~~ALaaGN~VVlKps~~tp~~~~~~l~~~l~~aGlP~gvv~vv~g~~~~~~~~L~~~p~v~~v~fT 230 (485)
T 4dng_A 151 SPFNFPMNLSMRSIAPAIALGNSVVHKPDIQTAISGGTIIAKAFEHAGLPAGVLNVMLTDVKEIGDGMLTNPIPRLISFT 230 (485)
T ss_dssp CCSSSHHHHHHHHHHHHHHTTCEEEEECCGGGHHHHTHHHHHHHHHTTCCTTSEEECCCCHHHHTTHHHHCSSCSEEEEE
T ss_pred CCCccHHHHHHHHHHHHHHcCCEEEEECCCcChHHHHHHHHHHHHHhCcCCCeEEEEeCCChhHHHHHHhCCCCCEEEEE
Confidence 999999999999999999999999999999999999 9999999999999999999999777799999999999999999
Q ss_pred CCcHHHHHHHHHHHhcccceeEEEcCCCCCceEcCCCCHHHHHHHHHHHhhccCCCCcccCceEEEeCchHHHHHHHHHH
Q 015042 158 GSTDVGRLVMQAAAASNLKQVSLELGGKSPLLIFDDADLDTAADVALLGNLYNKGEICVASSRVFVQEGIYDKFEKKLLE 237 (414)
Q Consensus 158 Gs~~~g~~i~~~~a~~~~~~~~~e~gg~~~~iV~~dadl~~aa~~i~~~~~~~~Gq~C~a~~~i~V~~~i~d~f~~~l~~ 237 (414)
||+.+|+.|++.++ ++++|+++|+|||||+||++|||++.|++.+++++|.|+||.|+++++||||+++||+|+++|++
T Consensus 231 GS~~~g~~i~~~aa-~~~~~v~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~~~GQ~C~a~~rvlV~~~i~d~f~~~l~~ 309 (485)
T 4dng_A 231 GSTAVGRHIGEIAG-RAFKRMALELGGNNPFAVLSDADVDRAVDAAIFGKFIHQGQICMIINRIIVHQDVYDEFVEKFTA 309 (485)
T ss_dssp ECHHHHHHHHHHHH-HHTCEEEEEECCCEEEEECTTSCHHHHHHHHHHHHTTCC----CCEEEEEEEHHHHHHHHHHHHH
T ss_pred CCcHHHHHHHHHHh-hhccchhhhcCCCCceEEcCCCCHHHHHHHHHHHHHhcCCCccccCCEEEEeHHHHHHHHHHHHH
Confidence 99999999999988 88999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhhcccCCCCCCCCcccccCCHHHHHHHHHHHHHHHHcCCEEEeCCcccCCCCceeeeEEEeeCCCcccccccceecce
Q 015042 238 KAKAWLVGDPFDPTVRQGPQISERHFDRILSYIEHGKREGATLLTGGKPIGDKGYYIEPTIFTNVKEDMIIAKEEIFGPV 317 (414)
Q Consensus 238 ~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPv 317 (414)
+++++++|+|.|+++++||+++..+++++.+++++++++|+++++||.. .|+|++|||+.+++++|++++||+||||
T Consensus 310 ~~~~~~~g~~~~~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~v~~gg~~---~g~~~~Ptvl~~v~~~~~i~~eE~FGPv 386 (485)
T 4dng_A 310 RVKQLPYGDQTDPKTVVGPLINERQIEKALEIIEQAKTDGIELAVEGKR---VGNVLTPYVFVGADNNSKIAQTELFAPI 386 (485)
T ss_dssp HHHHCCBSCTTSTTCSBCCCSSHHHHHHHHHHHHHHHHTTCEEEECCCE---ETTEECCEEEESCCTTSHHHHCCCCSSE
T ss_pred HHHhccCCCCCcCCCccCCCCCHHHHHHHHHHHHHHHHCCCEEEeCCCC---CCcEECCEEEecCCCCChhhcCccccce
Confidence 9999999999999999999999999999999999999999999999976 6899999999999999999999999999
Q ss_pred EEEEeeCCHHHHHHHhhcCCCCceEEEecCCHHHHHHHHHhcceeEEEEcCcCCC-CCCCCcccCCCCCCCccchHHHHH
Q 015042 318 MALMKFKTVEEAIKSANNTQYGLAAGIVTKDLNVANTVSRSIRAGIIWINCYFGF-SMDCPYGGYKMSGFGREYGLESLY 396 (414)
Q Consensus 318 l~v~~~~~~~eai~~~n~~~~gl~~sv~s~d~~~~~~~~~~l~~g~v~iN~~~~~-~~~~p~gG~~~sG~g~~~g~~~~~ 396 (414)
++|++|+|+||||+++|+++|||++||||+|.+.++++++++++|+|+||++... .+.+||||+|.||+|+++|+++++
T Consensus 387 l~v~~~~~~~eAi~~an~~~~gL~a~v~t~d~~~a~~~~~~l~~G~v~vN~~~~~~~~~~pfGG~~~SG~G~~~g~~~l~ 466 (485)
T 4dng_A 387 ATIIKAGSDQEAIDMANDTEYGLSSAVFTSDLEKGEKFALQIDSGMTHVNDQSVNDSPNIAFGGNKASGVGRFGNPWVVE 466 (485)
T ss_dssp EEEEEESSHHHHHHHHHCSSCCSEEEEECSCHHHHHHHHTTSCSSEEEESCC----------------------CHHHHH
T ss_pred EEEEEeCCHHHHHHHHhCCCCCceEEEECCCHHHHHHHHHhcCcceEEECCCCCCCCCCCCcCCcCCCCCCccchHHHHH
Confidence 9999999999999999999999999999999999999999999999999998754 688999999999999999999999
Q ss_pred hhheeeEEEeeCCCC
Q 015042 397 KYLQIKSVVTPIYNS 411 (414)
Q Consensus 397 ~~~~~k~i~~~~~~~ 411 (414)
+||+.|+|+++....
T Consensus 467 ~~t~~k~v~~~~~~~ 481 (485)
T 4dng_A 467 EFTVTKWISIQKQYR 481 (485)
T ss_dssp HHEEEEEEEEEC---
T ss_pred HhhceEEEEEecCCc
Confidence 999999999887543
|
| >2j6l_A Aldehyde dehydrogenase family 7 member A1; NAD, reductase, oxidoreductase, lysine catabolism; HET: NAI; 1.3A {Homo sapiens} PDB: 2jg7_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.8e-89 Score=698.45 Aligned_cols=405 Identities=28% Similarity=0.480 Sum_probs=379.0
Q ss_pred CHHHHHHHHHhHHHHHHHHHHhcCCChHHHhhchHHHHHHHHHHHHHhhhhhcCcccccC-CCcccceeecCCceEEEEc
Q 015042 1 MWKFADLIEEHVEELAALDALDAGKVYLRAKTAEIPGAAEFLRFFAGAADKIHGEVLKMS-SELQGYTLREPVGVVGHII 79 (414)
Q Consensus 1 L~~~a~~l~~~~~~l~~~~~~etGk~~~e~~~~ei~~~~~~l~~~a~~~~~~~~~~~~~~-~~~~~~~~~~P~Gvv~~i~ 79 (414)
|+++++.|++|+++|++++++|+|||..++ ..|+..+++.+++++.+.+++.+...+.. .+...+.+++|+|||++|+
T Consensus 87 L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea-~~ev~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~~P~GVv~~I~ 165 (500)
T 2j6l_A 87 VRQIGDALREKIQVLGSLVSLEMGKILVEG-VGEVQEYVDICDYAVGLSRMIGGPILPSERSGHALIEQWNPVGLVGIIT 165 (500)
T ss_dssp HHHHHHHHHHTHHHHHHHHHHHTCCCHHHH-HHHHHHHHHHHHHHHHHTTTCCCBEECCSSTTEEEEEEEEECSEEEEEC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHcCCCHHHH-HHHHHHHHHHHHHHHHHHHHhcCccccccCCCceeEEEEecccEEEEEC
Confidence 578999999999999999999999999986 57999999999999988877655544332 2334578899999999999
Q ss_pred CCccchHHHHHhHHHHHhhCCeEEeecCCCChHHHHHHHHHHH----HcCCCCCcEEEEeCCchhhHHHhhhCCCccEEE
Q 015042 80 PWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLTALYYAHLAK----LAGIPDGVLNVVPGFGPTAGAAICSHMDIDYVC 155 (414)
Q Consensus 80 p~n~P~~~~~~~~~~aLaaGN~vv~kps~~~~~~~~~l~~~l~----~aG~p~g~v~~v~~~~~~~~~~l~~~~~v~~v~ 155 (414)
|||||+...++++++||++||+||+|||+.+|+++..+++++. ++|+|+|+++++++ +.++++.|+.||+||+|+
T Consensus 166 PwN~P~~~~~~~~~~ALaaGN~VVlKps~~tp~t~~~l~~l~~~al~~aGlP~gvv~vv~g-~~~~g~~L~~~~~vd~I~ 244 (500)
T 2j6l_A 166 AFNFPVAVYGWNNAIAMICGNVCLWKGAPTTSLISVAVTKIIAKVLEDNKLPGAICSLTCG-GADIGTAMAKDERVNLLS 244 (500)
T ss_dssp CSSSTTHHHHHHHHHHHHTTCEEEEECCGGGHHHHHHHHHHHHHHHHHTTCCGGGEEEECC-SHHHHHHHHHCTTCSEEE
T ss_pred CCcchhhHHHHHHHHHHHhCCEEEEECCCccHHHHHHHHHHHHHHHHhhcCCcCeEEEEeC-CHHHHHHHhcCCCcCEEE
Confidence 9999999999999999999999999999999999999888765 56999999999999 778899999999999999
Q ss_pred EeCCcHHHHHHHHHHHhcccceeEEEcCCCCCceEcCCCCHHHHHHHHHHHhhccCCCCcccCceEEEeCchHHHHHHHH
Q 015042 156 FTGSTDVGRLVMQAAAASNLKQVSLELGGKSPLLIFDDADLDTAADVALLGNLYNKGEICVASSRVFVQEGIYDKFEKKL 235 (414)
Q Consensus 156 ~tGs~~~g~~i~~~~a~~~~~~~~~e~gg~~~~iV~~dadl~~aa~~i~~~~~~~~Gq~C~a~~~i~V~~~i~d~f~~~l 235 (414)
||||+.+|+.|++.++ ++++|+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|
T Consensus 245 FTGS~~~g~~i~~~aa-~~l~~v~lELGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l 323 (500)
T 2j6l_A 245 FTGSTQVGKQVGLMVQ-ERFGRSLLELGGNNAIIAFEDADLSLVVPSALFAAVGTAGQRCTTARRLFIHESIHDEVVNRL 323 (500)
T ss_dssp EESCHHHHHHHHHHHH-HTTCEEEEECCCCEEEEECTTCCHHHHHHHHHHHHHGGGGCSTTCEEEEEEETTTHHHHHHHH
T ss_pred EECCHHHHHHHHHHhc-cCCCceEEEcCCCCceEECCCCCHHHHHHHHHHHHHhcCCCCcCCCcEEEEcHHHHHHHHHHH
Confidence 9999999999999988 889999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhhcccCCCCCCCCcccccCCHHHHHHHHHHHHHHHHcCCEEEeCCcccCCCCceeeeEEEeeCCCcccccccceec
Q 015042 236 LEKAKAWLVGDPFDPTVRQGPQISERHFDRILSYIEHGKREGATLLTGGKPIGDKGYYIEPTIFTNVKEDMIIAKEEIFG 315 (414)
Q Consensus 236 ~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fg 315 (414)
++.++++++|+|.++++++||+++..+++++++++++++++|+++++||...+..|+|++|||+.+++++|.+++||+||
T Consensus 324 ~~~~~~~~~G~p~~~~~~~gpli~~~~~~rv~~~i~~a~~~Ga~v~~gg~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFG 403 (500)
T 2j6l_A 324 KKAYAQIRVGNPWDPNVLYGPLHTKQAVSMFLGAVEEAKKEGGTVVYGGKVMDRPGNYVEPTIVTGLGHDASIAHTETFA 403 (500)
T ss_dssp HHHHHTCCBSCTTSTTCCBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCSBCSSSSSCBCCEEEESCCTTCHHHHSCCSS
T ss_pred HHHhhhcccCCcccCCCccccCCCHHHHHHHHHHHHHHHHCCCEEEECCcccCCCCCEEcCEEEECCCCcChhhcCcccC
Confidence 99999999999999999999999999999999999999999999999998644469999999999999999999999999
Q ss_pred ceEEEEeeCCHHHHHHHhhcCCCCceEEEecCCHHHHHHHH--HhcceeEEEEcCcCC-CCCCCCcccCCCCCCCccchH
Q 015042 316 PVMALMKFKTVEEAIKSANNTQYGLAAGIVTKDLNVANTVS--RSIRAGIIWINCYFG-FSMDCPYGGYKMSGFGREYGL 392 (414)
Q Consensus 316 Pvl~v~~~~~~~eai~~~n~~~~gl~~sv~s~d~~~~~~~~--~~l~~g~v~iN~~~~-~~~~~p~gG~~~sG~g~~~g~ 392 (414)
||++|++|+|+||||+++|+++|||++||||+|.+.+++++ .++++|+|+||++.. ..+.+||||+|.||+|+++|.
T Consensus 404 PVl~v~~~~~~deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~~~~~~G~V~vN~~~~~~~~~~PfGG~k~SG~G~~~g~ 483 (500)
T 2j6l_A 404 PILYVFKFQNEEEVFAWNNEVKQGLSSSIFTKDLGRIFRWLGPKGSDCGIVNVNIPTSGAEIGGAFGGEKHTGGGRESGS 483 (500)
T ss_dssp SEEEEEEECCHHHHHHHHHTSSCCSEEEEECCCHHHHHHHHSTTSCCSSEEEESSCTTCCCTTSEECCSGGGCSCCEEST
T ss_pred ceEEEEeeCCHHHHHHHHhCCCCCcEEEEECCCHHHHHHHHhhccCCeeEEEECCCCccCCCCCCcCCcCCCCCCCcchH
Confidence 99999999999999999999999999999999999999999 779999999998765 346899999999999999999
Q ss_pred HHHHhhheeeEEEeeC
Q 015042 393 ESLYKYLQIKSVVTPI 408 (414)
Q Consensus 393 ~~~~~~~~~k~i~~~~ 408 (414)
+|+++|++.|+|+++.
T Consensus 484 ~~~~~f~~~k~v~~~~ 499 (500)
T 2j6l_A 484 DAWKQYMRRSTCTINY 499 (500)
T ss_dssp TGGGGGEEEEEEEEEC
T ss_pred HHHHHhhceEEEEEeC
Confidence 9999999999998763
|
| >1uzb_A 1-pyrroline-5-carboxylate dehydrogenase; oxidoreductase, riken structural genomics/proteomics initiative, RSGI, structural genomics; 1.4A {Thermus thermophilus} SCOP: c.82.1.1 PDB: 2eiw_A 2bhq_A* 2bhp_A* 2bja_A* 2bjk_A* 2ehq_A* 2ehu_A* 2eii_A* 2eit_A* 2ej6_A 2ejd_A* 2ejl_A 2iy6_A* 2j40_A* 2j5n_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4.4e-89 Score=698.07 Aligned_cols=404 Identities=32% Similarity=0.566 Sum_probs=378.3
Q ss_pred CHHHHHHHHHhHHHHHHHHHHhcCCChHHHhhchHHHHHHHHHHHHHhhhhhcCcccc--cCCCcccceeecCCceEEEE
Q 015042 1 MWKFADLIEEHVEELAALDALDAGKVYLRAKTAEIPGAAEFLRFFAGAADKIHGEVLK--MSSELQGYTLREPVGVVGHI 78 (414)
Q Consensus 1 L~~~a~~l~~~~~~l~~~~~~etGk~~~e~~~~ei~~~~~~l~~~a~~~~~~~~~~~~--~~~~~~~~~~~~P~Gvv~~i 78 (414)
|+++++.|++|+++|++++++|+|||..++. .|+..+++.+++++..+++..+...+ ...+...+.+++|+|||++|
T Consensus 102 L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea~-~ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I 180 (516)
T 1uzb_A 102 LLKAAALMRRRKRELEATLVYEVGKNWVEAS-ADVAEAIDFIEYYARAALRYRYPAVEVVPYPGEDNESFYVPLGAGVVI 180 (516)
T ss_dssp HHHHHHHHHHTHHHHHHHHHHHHCCCHHHHH-HHHHHHHHHHHHHHHHHGGGCSSCCCCCCCTTEEEEEEEEECCEEEEE
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCCHHHHH-HHHHHHHHHHHHHHHHHHHhcCCcccccCCCCceEEEEEeccceEEEE
Confidence 5789999999999999999999999999865 69999999999999988877665422 12344568899999999999
Q ss_pred cCCccchHHHHHhHHHHHhhCCeEEeecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhhHHHhhhCCCccEEEEeC
Q 015042 79 IPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLTALYYAHLAKLAGIPDGVLNVVPGFGPTAGAAICSHMDIDYVCFTG 158 (414)
Q Consensus 79 ~p~n~P~~~~~~~~~~aLaaGN~vv~kps~~~~~~~~~l~~~l~~aG~p~g~v~~v~~~~~~~~~~l~~~~~v~~v~~tG 158 (414)
+|||||+...++++++||++||+||+|||+.+|+++..+++++.++|+|+|++|++++.+.++++.|+.||+||+|.|||
T Consensus 181 ~PwN~P~~~~~~~~a~ALaaGN~VVlKps~~tp~ta~~l~~l~~eaGlP~gvv~vv~g~~~~~~~~L~~~~~v~~I~FTG 260 (516)
T 1uzb_A 181 APWNFPVAIFTGMIVGPVAVGNTVIAKPAEDAVVVGAKVFEIFHEAGFPPGVVNFLPGVGEEVGAYLVEHPRIRFINFTG 260 (516)
T ss_dssp CCSSSTTHHHHHHHHHHHHTTCEEEEECCGGGHHHHHHHHHHHHHHTCCTTSEEECCCSSSHHHHHHHTCTTCCEEEEES
T ss_pred CCCccHHHHHHHHHHHHHHcCCeEEEeCCCCCHHHHHHHHHHHHHhCCCcCeEEEEeCCCchhhhhhhcCCCcCEEEecC
Confidence 99999999999999999999999999999999999999999999999999999999997778899999999999999999
Q ss_pred CcHHHHHHHHHHHh-----cccceeEEEcCCCCCceEcCCCCHHHHHHHHHHHhhccCCCCcccCceEEEeCchHHHHHH
Q 015042 159 STDVGRLVMQAAAA-----SNLKQVSLELGGKSPLLIFDDADLDTAADVALLGNLYNKGEICVASSRVFVQEGIYDKFEK 233 (414)
Q Consensus 159 s~~~g~~i~~~~a~-----~~~~~~~~e~gg~~~~iV~~dadl~~aa~~i~~~~~~~~Gq~C~a~~~i~V~~~i~d~f~~ 233 (414)
|+.+|+.|++.++. ++++|+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|++
T Consensus 261 S~~~G~~i~~~aa~~~~~~~~~~~v~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~ 340 (516)
T 1uzb_A 261 SLEVGLKIYEAAGRLAPGQTWFKRAYVETGGKNAIIVDETADFDLAAEGVVVSAYGFQGQKCSAASRLILTQGAYEPVLE 340 (516)
T ss_dssp CHHHHHHHHHHHTSCCTTCCSCCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCSTTCEEEEEEEHHHHHHHHH
T ss_pred CHHHHHHHHHHhhhccccccccceeEEecCCccceeECCCCCHHHHHHHHHHHHHhCCCCccccCcEEEEchHHHHHHHH
Confidence 99999999998762 5689999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhhcccCCCCCCCCcccccCCHHHHHHHHHHHHHHHHcCCEEEeCCcccCCCCceeeeEEEeeCCCcccccccce
Q 015042 234 KLLEKAKAWLVGDPFDPTVRQGPQISERHFDRILSYIEHGKREGATLLTGGKPIGDKGYYIEPTIFTNVKEDMIIAKEEI 313 (414)
Q Consensus 234 ~l~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~ 313 (414)
+|++.++++++|+| ++++++||+++..+++++.+++++++++| ++++||...+..|+|++|||+.+++++|++++||+
T Consensus 341 ~l~~~~~~~~~G~p-~~~~~~Gpli~~~~~~~v~~~i~~a~~~G-~v~~gg~~~~~~g~~~~Ptvl~~v~~~~~i~~eEi 418 (516)
T 1uzb_A 341 RVLKRAERLSVGPA-EENPDLGPVVSAEQERKVLSYIEIGKNEG-QLVLGGKRLEGEGYFIAPTVFTEVPPKARIAQEEI 418 (516)
T ss_dssp HHHHHHTTCCBSCG-GGCCSBCCCSCHHHHHHHHHHHHHHTTTS-EEEECCSBCSSSSCCBCCEEEESCCTTSGGGTSCC
T ss_pred HHHHHHHhccCCCC-ccccccCCCCCHHHHHHHHHHHHHHHHCC-CEEECCccCCCCCcEECCEEEECCCCCCHhhhccc
Confidence 99999999999999 99999999999999999999999999998 89999976334699999999999999999999999
Q ss_pred ecceEEEEeeCCHHHHHHHhhcCCCCceEEEecCCHHHHHHHHHhcceeEEEEcCcCC--CCCCCCcccCCCCCCC-ccc
Q 015042 314 FGPVMALMKFKTVEEAIKSANNTQYGLAAGIVTKDLNVANTVSRSIRAGIIWINCYFG--FSMDCPYGGYKMSGFG-REY 390 (414)
Q Consensus 314 fgPvl~v~~~~~~~eai~~~n~~~~gl~~sv~s~d~~~~~~~~~~l~~g~v~iN~~~~--~~~~~p~gG~~~sG~g-~~~ 390 (414)
||||++|++|+|+||||+++|+++|||++||||+|.+.++++++++++|+|+||++.. ..+.+||||+|.||+| +++
T Consensus 419 FGPVl~v~~~~~~~eAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~v~iN~~~~~~~~~~~PfGG~k~SG~G~~~~ 498 (516)
T 1uzb_A 419 FGPVLSVIRVKDFAEALEVANDTPYGLTGGVYSRKREHLEWARREFHVGNLYFNRKITGALVGVQPFGGFKLSGTNAKTG 498 (516)
T ss_dssp CSSEEEEEEESSHHHHHHHHHCSSCCSEEEEECSCHHHHHHHHHHSCCSEEEESSCSCCCCTTTSCBCCSGGGBSCCCBT
T ss_pred cCceEEEEEeCCHHHHHHHHhcCCCCceEEEECCCHHHHHHHHHhCCEeEEEEeCCCCCCCCCCCCCCCcCcCCCCCccc
Confidence 9999999999999999999999999999999999999999999999999999998654 3568999999999999 478
Q ss_pred hHHHHHhhheeeEEEee
Q 015042 391 GLESLYKYLQIKSVVTP 407 (414)
Q Consensus 391 g~~~~~~~~~~k~i~~~ 407 (414)
|.+++++||++|+|+.+
T Consensus 499 g~~~l~~f~~~k~v~~~ 515 (516)
T 1uzb_A 499 ALDYLRLFLEMKAVAER 515 (516)
T ss_dssp SHHHHHTTEEEEEEEEE
T ss_pred hHHHHHHcCCeeEEEec
Confidence 99999999999999875
|
| >1euh_A NADP dependent non phosphorylating glyceraldehyde-3-phosphate dehydrogenase; oxidoreductase; 1.82A {Streptococcus mutans} SCOP: c.82.1.1 PDB: 1qi6_A 2euh_A* 2id2_A* 2qe0_A* 2esd_A* 1qi1_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.3e-89 Score=694.40 Aligned_cols=400 Identities=34% Similarity=0.515 Sum_probs=378.1
Q ss_pred CHHHHHHHHHhHHHHHHHHHHhcCCChHHHhhchHHHHHHHHHHHHHhhhhhcCcccccC-CC----ccc-ceeecCCce
Q 015042 1 MWKFADLIEEHVEELAALDALDAGKVYLRAKTAEIPGAAEFLRFFAGAADKIHGEVLKMS-SE----LQG-YTLREPVGV 74 (414)
Q Consensus 1 L~~~a~~l~~~~~~l~~~~~~etGk~~~e~~~~ei~~~~~~l~~~a~~~~~~~~~~~~~~-~~----~~~-~~~~~P~Gv 74 (414)
|+++++.|++|+++|++++++|+|||..++ ..|+..+++.+++++.+.++..+...+.. .+ ... +.+++|+||
T Consensus 68 L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea-~~ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GV 146 (475)
T 1euh_A 68 LHKVADILMRDKEKIGAILSKEVAKGYKSA-VSEVVRTAEIINYAAEEGLRMEGEVLEGGSFEAASKKKIAVVRREPVGL 146 (475)
T ss_dssp HHHHHHHHHHTHHHHHHHHHHHHTCCHHHH-HHHHHHHHHHHHHHHHHHTTCCEEEEEGGGTCGGGTTEEEEEEEEECSE
T ss_pred HHHHHHHHHHhHHHHHHHHHHHhCCCHHHH-HHHHHHHHHHHHHHHHHHHHhcCCcccCCCCCccccceeeEEEEeccce
Confidence 578999999999999999999999999986 56999999999999998877655543322 23 345 889999999
Q ss_pred EEEEcCCccchHHHHHhHHHHHhhCCeEEeecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhhHHHhhhCCCccEE
Q 015042 75 VGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLTALYYAHLAKLAGIPDGVLNVVPGFGPTAGAAICSHMDIDYV 154 (414)
Q Consensus 75 v~~i~p~n~P~~~~~~~~~~aLaaGN~vv~kps~~~~~~~~~l~~~l~~aG~p~g~v~~v~~~~~~~~~~l~~~~~v~~v 154 (414)
|++|+|||||+...++++++||++||+||+|||+.+|.++..+++++.++|+|+|+++++++.+.+.++.|+.||++|+|
T Consensus 147 v~~I~PwN~P~~~~~~~~~~ALaaGN~vVlKps~~tp~t~~~l~~ll~~aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~V 226 (475)
T 1euh_A 147 VLAISPFNYPVNLAGSKIAPALIAGNVIAFKPPTQGSISGLLLAEAFAEAGLPAGVFNTITGRGSEIGDYIVEHQAVNFI 226 (475)
T ss_dssp EEEECCTTSTTHHHHHHHHHHHHTTCEEEEECCSTTHHHHHHHHHHHHHHTCCTTTEEECCCCHHHHHHHHHHCTTCCEE
T ss_pred EEEECCCCchHHHHHHHHHHHHHcCCEEEEeCCCcChHHHHHHHHHHHHhCCCcCeEEEEeCCcHHHHHHHHhCCCcCEE
Confidence 99999999999999999999999999999999999999999999999999999999999999767789999999999999
Q ss_pred EEeCCcHHHHHHHHHHHhcccceeEEEcCCCCCceEcCCCCHHHHHHHHHHHhhccCCCCcccCceEEEeCchHHHHHHH
Q 015042 155 CFTGSTDVGRLVMQAAAASNLKQVSLELGGKSPLLIFDDADLDTAADVALLGNLYNKGEICVASSRVFVQEGIYDKFEKK 234 (414)
Q Consensus 155 ~~tGs~~~g~~i~~~~a~~~~~~~~~e~gg~~~~iV~~dadl~~aa~~i~~~~~~~~Gq~C~a~~~i~V~~~i~d~f~~~ 234 (414)
.||||+.+|+.|++.++ ++|+++|+|||||+||++|||++.|++.+++++|.|+||.|+++++||||++++|+|+++
T Consensus 227 ~fTGS~~~g~~i~~~aa---~~~v~lElGGk~p~iV~~dADl~~aa~~i~~~~~~n~GQ~C~a~~rv~V~~~i~d~f~~~ 303 (475)
T 1euh_A 227 NFTGSTGIGERIGKMAG---MRPIMLELGGKDSAIVLEDADLELTAKNIIAGAFGYSGQRCTAVKRVLVMESVADELVEK 303 (475)
T ss_dssp EEESCHHHHHHHHHHTT---TSCEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCCSSSEEEEEEEHHHHHHHHHH
T ss_pred EEECchHHHHHHHHhcC---CCcEEEEcCCcCeEEECCCCCHHHHHHHHHHHHhhcCCCcCCCCcEEEEehhHHHHHHHH
Confidence 99999999999998864 899999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhhcccCCCCCCCCcccccCCHHHHHHHHHHHHHHHHcCCEEEeCCcccCCCCceeeeEEEeeCCCccccccccee
Q 015042 235 LLEKAKAWLVGDPFDPTVRQGPQISERHFDRILSYIEHGKREGATLLTGGKPIGDKGYYIEPTIFTNVKEDMIIAKEEIF 314 (414)
Q Consensus 235 l~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~f 314 (414)
|+++++++++|+|.+ ++++||+++..+++++.+++++++++|+++++||.. .|+|++|||+.+++++|++++||+|
T Consensus 304 l~~~~~~~~~g~p~~-~~~~gpli~~~~~~~v~~~i~~a~~~Ga~~~~gG~~---~g~~~~Ptvl~~v~~~~~~~~eE~F 379 (475)
T 1euh_A 304 IREKVLALTIGNPED-DADITPLIDTKSADYVEGLINDANDKGATALTEIKR---EGNLICPILFDKVTTDMRLAWEEPF 379 (475)
T ss_dssp HHHHHHTSCBSCGGG-TCSBCCCSCHHHHHHHHHHHHHHHHTTCEECSCCCE---ETTEECCEEEESCCTTSGGGTSCCC
T ss_pred HHHHHHhccCCCccc-cCccCCCCCHHHHHHHHHHHHHHHHCCCEEEeCCcc---CCceeCCEEEeCCCCcCHHHcCccc
Confidence 999999999999999 999999999999999999999999999999999976 5899999999999999999999999
Q ss_pred cceEEEEeeCCHHHHHHHhhcCCCCceEEEecCCHHHHHHHHHhcceeEEEEcC-cCCCCCCCCcccCCCCCCCccchHH
Q 015042 315 GPVMALMKFKTVEEAIKSANNTQYGLAAGIVTKDLNVANTVSRSIRAGIIWINC-YFGFSMDCPYGGYKMSGFGREYGLE 393 (414)
Q Consensus 315 gPvl~v~~~~~~~eai~~~n~~~~gl~~sv~s~d~~~~~~~~~~l~~g~v~iN~-~~~~~~~~p~gG~~~sG~g~~~g~~ 393 (414)
|||++|++|+|+||||+++|+++|||++||||+|.+.++++++++++|+|+||+ +....+.+||||+|.||+|+++|++
T Consensus 380 GPvl~v~~~~~~~eai~~an~~~~gL~a~v~t~d~~~~~~~~~~l~~G~v~vN~~~~~~~~~~pfGG~k~SG~G~~~g~~ 459 (475)
T 1euh_A 380 GPVLPIIRVTSVEEAIEISNKSEYGLQASIFTNDFPRAFGIAEQLEVGTVHINNKTQRGTDNFPFLGAKKSGAGIQGVKY 459 (475)
T ss_dssp SSEEEEEEESCHHHHHHHHHHSSEESEEEEECSCHHHHHHHHHHSCSSEEEESSCCCCCSTTSCBCCEETTEESCBSHHH
T ss_pred cceEEEEecCCHHHHHHHHhCCCCCeeEEEEeCCHHHHHHHHHhCCEeeEEECCCCCCCCCCCCcCCCCCCCcCCCccHH
Confidence 999999999999999999999999999999999999999999999999999999 6666788999999999999999999
Q ss_pred HHHhhheeeEEEeeC
Q 015042 394 SLYKYLQIKSVVTPI 408 (414)
Q Consensus 394 ~~~~~~~~k~i~~~~ 408 (414)
|+++|+++|+|+.+.
T Consensus 460 ~~~~~~~~k~v~~~~ 474 (475)
T 1euh_A 460 SIEAMTTVKSVVFDI 474 (475)
T ss_dssp HHHHTEEEEEEEEEC
T ss_pred HHHHhCCeeEEEEec
Confidence 999999999998764
|
| >3ty7_A Putative aldehyde dehydrogenase SAV2122; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE; 2.40A {Staphylococcus aureus} | Back alignment and structure |
|---|
Probab=100.00 E-value=3e-89 Score=694.52 Aligned_cols=400 Identities=37% Similarity=0.625 Sum_probs=357.5
Q ss_pred CHHHHHHHHHhHHHHHHHHHHhcCCChHHHhhchHHHHHHHHHHHHHhhhhhcCcccccCCCcccceeecCCceEEEEcC
Q 015042 1 MWKFADLIEEHVEELAALDALDAGKVYLRAKTAEIPGAAEFLRFFAGAADKIHGEVLKMSSELQGYTLREPVGVVGHIIP 80 (414)
Q Consensus 1 L~~~a~~l~~~~~~l~~~~~~etGk~~~e~~~~ei~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p 80 (414)
|+++++.|++|+++|++++++|+|||..++...|+..+++.++++++..++..+.. .....+.+++|+|||++|+|
T Consensus 73 L~~~a~~l~~~~~~la~~~~~e~Gk~~~ea~~~ev~~~~~~~~~~a~~~~~~~~~~----~~~~~~~~~~P~GVv~~I~P 148 (478)
T 3ty7_A 73 LDKIVKEYENRKDDIVQAITDELGAPLSLSERVHYQMGLNHFVAARDALDNYEFEE----RRGDDLVVKEAIGVSGLITP 148 (478)
T ss_dssp HHHHHHHHHHTHHHHHHHHHHHHCCCHHHHHHTHHHHHHHHHHHHHHHHHHCCSEE----EETTEEEEEEECCCEEEECC
T ss_pred HHHHHHHHHHhHHHHHHHHHHHhCCCHHHHhHHHHHHHHHHHHHHHHHHHHhhccc----CCccceEEecCceEEEEECC
Confidence 57899999999999999999999999998757799999999999999887765432 22467889999999999999
Q ss_pred CccchHHHHHhHHHHHhhCCeEEeecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhhHHHhhhCCCccEEEEeCCc
Q 015042 81 WNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLTALYYAHLAKLAGIPDGVLNVVPGFGPTAGAAICSHMDIDYVCFTGST 160 (414)
Q Consensus 81 ~n~P~~~~~~~~~~aLaaGN~vv~kps~~~~~~~~~l~~~l~~aG~p~g~v~~v~~~~~~~~~~l~~~~~v~~v~~tGs~ 160 (414)
||||+...++++++||++||+||+|||+.+|.++..+.+++.++|+|+|+++++++++.++++.|+.||+||+|+||||+
T Consensus 149 wN~P~~~~~~~~~~ALaaGN~VVlKps~~tp~t~~~l~~~~~~aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~v~fTGS~ 228 (478)
T 3ty7_A 149 WNFPTNQTSLKLAAAFAAGSPVVLKPSEETPFAAVILAEIFDKVGVPKGVFNLVNGDGAGVGNPLSEHPKVRMMSFTGSG 228 (478)
T ss_dssp SSSTTHHHHHHHHHHHHHTCCEEEECCTTSCHHHHHHHHHHHHHTCCTTTEEECCCCTTTTHHHHHHCTTCCEEEECSCH
T ss_pred CcchHHHHHHHHHHHHHcCCeEEEECCCcchHHHHHHHHHHHHhCcCcCeEEEEECCChHHHHHHHhCCCcCEEEEECcH
Confidence 99999999999999999999999999999999999999999999999999999999888899999999999999999999
Q ss_pred HHHHHHHHHHHhcccceeEEEcCCCCCceEcCCCCHHHHHHHHHHHhhccCCCCcccCceEEEeCchHHHHHHHHHHHHh
Q 015042 161 DVGRLVMQAAAASNLKQVSLELGGKSPLLIFDDADLDTAADVALLGNLYNKGEICVASSRVFVQEGIYDKFEKKLLEKAK 240 (414)
Q Consensus 161 ~~g~~i~~~~a~~~~~~~~~e~gg~~~~iV~~dadl~~aa~~i~~~~~~~~Gq~C~a~~~i~V~~~i~d~f~~~l~~~~~ 240 (414)
.+|+.|++.++ ++++|+++|+|||||+||++|||++.|++.+++++|.|+||.|+++++||||+++||+|+++|+++++
T Consensus 229 ~~G~~i~~~aa-~~~~~v~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~~~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~ 307 (478)
T 3ty7_A 229 PTGSKIMEKAA-KDFKKVSLELGGKSPYIVLDDVDIKEAAKATTGKVVNNTGQVCTAGTRVLVPNKIKDAFLAELKEQFS 307 (478)
T ss_dssp HHHCC--CSTT-TTTCEEECCCCCCCEEEECTTSCHHHHHHHHHHHHHGGGGCCTTCCCEEEEETTTHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHH-hcCCceEEecCCCCCcccCCCCCHHHHHHHHHHHHHHhCCCCccCCCeEEEcHHHHHHHHHHHHHHHH
Confidence 99999999887 88999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hcccCCCCCCCCcccccCCHHHHHHHHHHHHHHHHcCCEEEeCCcccC---CCCceeeeEEEeeCCCcccccccceecce
Q 015042 241 AWLVGDPFDPTVRQGPQISERHFDRILSYIEHGKREGATLLTGGKPIG---DKGYYIEPTIFTNVKEDMIIAKEEIFGPV 317 (414)
Q Consensus 241 ~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~---~~g~~~~Ptvl~~~~~~~~~~~~E~fgPv 317 (414)
++++|+|.++++++||+++..+++++++++++++++|+++++||.... ..|+|++|||+.+++++|++++||+||||
T Consensus 308 ~~~~g~p~~~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~~~~gg~~~~~~~~~g~~~~Ptvl~~v~~~~~~~~eE~FGPv 387 (478)
T 3ty7_A 308 QVRVGNPREDGTQVGPIISKKQFDQVQNYINKGIEEGAELFYGGPGKPEGLEKGYFARPTIFINVDNQMTIAQEEIFGPV 387 (478)
T ss_dssp TCCBSCTTSTTCCBCCCSCHHHHHHHHHHHHHHHHHTCEEEECCSSCCTTCCSSCCCCCEEEESCCTTSHHHHSCCCSSE
T ss_pred hccCCCCCCCCCccCCCcCHHHHHHHHHHHHHHHHCCCEEEecCccCccccCCCceeCCEEEecCCCCCcccCceeECce
Confidence 999999999999999999999999999999999999999999994322 37999999999999999999999999999
Q ss_pred EEEEeeCCHHHHHHHhhcCCCCceEEEecCCHHHHHHHHHhcceeEEEEcCcCCCCCCCCcccCCCCCCCccchHHHHHh
Q 015042 318 MALMKFKTVEEAIKSANNTQYGLAAGIVTKDLNVANTVSRSIRAGIIWINCYFGFSMDCPYGGYKMSGFGREYGLESLYK 397 (414)
Q Consensus 318 l~v~~~~~~~eai~~~n~~~~gl~~sv~s~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~p~gG~~~sG~g~~~g~~~~~~ 397 (414)
++|++|+|+||||+++|+++|||++||||+|.+.++++++++++|+|+||+ ....+.+||||+|.||+|+++|++|+++
T Consensus 388 l~v~~~~~~~eAi~~an~~~~gL~a~v~t~d~~~a~~~~~~l~~G~v~vN~-~~~~~~~PfGG~k~SG~G~~~G~~~l~~ 466 (478)
T 3ty7_A 388 MSVITYNDLDEAIQIANDTKYGLAGYVIGKDKETLHKVARSIEAGTVEINE-AGRKPDLPFGGYKQSGLGREWGDYGIEE 466 (478)
T ss_dssp EEEEEESSHHHHHHHHTCSSCCSEEEEECSCHHHHHHHHHHSCSSEEEETT-CC----------------------CCGG
T ss_pred eEEEecCCHHHHHHHHhCCCCCceEEEECCCHHHHHHHHHhCCcCeEEECC-CCCCCCCCcCCcCcCcCCccchHHHHHH
Confidence 999999999999999999999999999999999999999999999999999 5566789999999999999999999999
Q ss_pred hheeeEEEe
Q 015042 398 YLQIKSVVT 406 (414)
Q Consensus 398 ~~~~k~i~~ 406 (414)
||++|+|+.
T Consensus 467 ~t~~k~v~~ 475 (478)
T 3ty7_A 467 FLEVKSIAG 475 (478)
T ss_dssp GEEEEEEET
T ss_pred hcCeEEEEE
Confidence 999999874
|
| >1t90_A MMSDH, probable methylmalonate-semialdehyde dehydrogenase; oxidoreductase, NAD; HET: NAD; 2.50A {Bacillus subtilis} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.9e-88 Score=689.09 Aligned_cols=405 Identities=35% Similarity=0.525 Sum_probs=379.5
Q ss_pred CHHHHHHHHHhHHHHHHHHHHhcCCChHHHhhchHHHHHHHHHHHHHhhhhhcCccccc-CCCcccceeecCCceEEEEc
Q 015042 1 MWKFADLIEEHVEELAALDALDAGKVYLRAKTAEIPGAAEFLRFFAGAADKIHGEVLKM-SSELQGYTLREPVGVVGHII 79 (414)
Q Consensus 1 L~~~a~~l~~~~~~l~~~~~~etGk~~~e~~~~ei~~~~~~l~~~a~~~~~~~~~~~~~-~~~~~~~~~~~P~Gvv~~i~ 79 (414)
|+++++.|++|+++|++++++|+|||..++ ..|+..+++.+++++.+.+...++..+. ..+...+.+++|+|||++|+
T Consensus 71 L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a-~~ev~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~~P~GVV~~I~ 149 (486)
T 1t90_A 71 LFNFQQLLSQHKEELAHLITIENGKNTKEA-LGEVGRGIENVEFAAGAPSLMMGDSLASIATDVEAANYRYPIGVVGGIA 149 (486)
T ss_dssp HHHHHHHHHTTHHHHHHHHHHHHCCCHHHH-HHHHHHHHHHHHHHTTHHHHHCEEEEEEEETTEEEEEEEEECSEEEEEC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCCHHHH-HHHHHHHHHHHHHHHHHHHHhcCcccccCCCCceeEEEecccCEEEEEC
Confidence 578999999999999999999999999976 4799999999999987766655554331 23446688999999999999
Q ss_pred CCccchHHHHHhHHHHHhhCCeEEeecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhhHHHhhhCCCccEEEEeCC
Q 015042 80 PWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLTALYYAHLAKLAGIPDGVLNVVPGFGPTAGAAICSHMDIDYVCFTGS 159 (414)
Q Consensus 80 p~n~P~~~~~~~~~~aLaaGN~vv~kps~~~~~~~~~l~~~l~~aG~p~g~v~~v~~~~~~~~~~l~~~~~v~~v~~tGs 159 (414)
|||||+...++++++||++||+||+|||+.+|+++..+++++.++|+|+|++|++++ +.+.++.|+.||+||+|.||||
T Consensus 150 PwN~P~~~~~~~~~~ALaaGN~VVlKps~~tp~t~~~l~~l~~~aGlP~gvv~vv~g-~~~~~~~L~~~~~v~~I~fTGS 228 (486)
T 1t90_A 150 PFNFPMMVPCWMFPMAIALGNTFILKPSERTPLLTEKLVELFEKAGLPKGVFNVVYG-AHDVVNGILEHPEIKAISFVGS 228 (486)
T ss_dssp CSSCTTHHHHHHHHHHHHTTCEEEEECCSSSCHHHHHHHHHHHHTTCCTTSEEECCC-SHHHHHHHHHCTTEEEEEEESC
T ss_pred CCchhHHHHHHHHHHHHHcCCEEEEECCCCChHHHHHHHHHHHHhCCCCCEEEEEEC-CHHHHHHHHhCCCCCEEEEeCC
Confidence 999999999999999999999999999999999999999999999999999999998 6678999999999999999999
Q ss_pred cHHHHHHHHHHHhcccceeEEEcCCCCCceEcCCCCHHHHHHHHHHHhhccCCCCcccCce-EEEeCchHHHHHHHHHHH
Q 015042 160 TDVGRLVMQAAAASNLKQVSLELGGKSPLLIFDDADLDTAADVALLGNLYNKGEICVASSR-VFVQEGIYDKFEKKLLEK 238 (414)
Q Consensus 160 ~~~g~~i~~~~a~~~~~~~~~e~gg~~~~iV~~dadl~~aa~~i~~~~~~~~Gq~C~a~~~-i~V~~~i~d~f~~~l~~~ 238 (414)
+.+|+.|++.++ ++++|+++|+|||||+||++|||++.|++.+++++|.|+||.|++++| ||||++ +|+|+++|++.
T Consensus 229 ~~~g~~i~~~aa-~~~~pv~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvv~v~~~-~d~f~~~l~~~ 306 (486)
T 1t90_A 229 KPVGEYVYKKGS-ENLKRVQSLTGAKNHTIVLNDANLEDTVTNIVGAAFGSAGERCMACAVVTVEEGI-ADEFMAKLQEK 306 (486)
T ss_dssp HHHHHHHHHHHH-HTTCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCCTTCEEEEEEEHHH-HHHHHHHHHHH
T ss_pred HHHHHHHHHHHh-ccCCcEEeccCCCCcEEECCCCCHHHHHHHHHHHHHhCCCCCcccCCeeEEecCC-HHHHHHHHHHH
Confidence 999999999988 889999999999999999999999999999999999999999999999 999999 99999999999
Q ss_pred HhhcccCCCCCCCCcccccCCHHHHHHHHHHHHHHHHcCCEEEeCCcccC-CCCceeeeEEEeeCCCcccccccceecce
Q 015042 239 AKAWLVGDPFDPTVRQGPQISERHFDRILSYIEHGKREGATLLTGGKPIG-DKGYYIEPTIFTNVKEDMIIAKEEIFGPV 317 (414)
Q Consensus 239 ~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~-~~g~~~~Ptvl~~~~~~~~~~~~E~fgPv 317 (414)
++++++|+|.++++++||+++..+++++.+++++++++|+++++||.... ..|+|++|||+.+++++|++++||+||||
T Consensus 307 ~~~~~vG~~~~~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~~~~gg~~~~~~~g~~~~Ptvl~~v~~~~~~~~eEiFGPv 386 (486)
T 1t90_A 307 VADIKIGNGLDDGVFLGPVIREDNKKRTLSYIEKGLEEGARLVCDGRENVSDDGYFVGPTIFDNVTTEMTIWKDEIFAPV 386 (486)
T ss_dssp HTTCCBSCTTSTTCCBCCCSCHHHHHHHHHHHHHHHHHTCEEEECSSSSCCSSSSCCCCEEEESCCTTSHHHHSCCCSSE
T ss_pred HHhcccCCCCccCCccCCCCCHHHHHHHHHHHHHHHhCCCEEEeCCccCCCCCCCEECCEEEeCCCCCCHhhcCcccCce
Confidence 99999999999999999999999999999999999999999999997432 36899999999999999999999999999
Q ss_pred EEEEeeCCHHHHHHHhhcCCCCceEEEecCCHHHHHHHHHhcceeEEEEcCcCCC-CCCCCcccCCCCCCC--ccchHHH
Q 015042 318 MALMKFKTVEEAIKSANNTQYGLAAGIVTKDLNVANTVSRSIRAGIIWINCYFGF-SMDCPYGGYKMSGFG--REYGLES 394 (414)
Q Consensus 318 l~v~~~~~~~eai~~~n~~~~gl~~sv~s~d~~~~~~~~~~l~~g~v~iN~~~~~-~~~~p~gG~~~sG~g--~~~g~~~ 394 (414)
++|++|+|+||||+++|+++|||++||||+|.+.++++++++++|+|+||++... .+.+||||+|.||+| +++|++|
T Consensus 387 l~v~~~~~~~eai~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~v~vN~~~~~~~~~~PfGG~k~SG~G~~~~~g~~g 466 (486)
T 1t90_A 387 LSVIRVKNLKEAIEIANKSEFANGACLFTSNSNAIRYFRENIDAGMLGINLGVPAPMAFFPFSGWKSSFFGTLHANGKDS 466 (486)
T ss_dssp EEEEEESSHHHHHHHHHHSSEESEEEEECCBHHHHHHHHHHCCCSEEEESCSCCCCCTTSCCCCEETTEESSSCSSHHHH
T ss_pred EEEEEeCCHHHHHHHHhCCCCCeEEEEEcCCHHHHHHHHHhCCcCeEEECCCCCCCCCCCCcCCCCcCCCCCCccchHHH
Confidence 9999999999999999999999999999999999999999999999999986543 468999999999999 8999999
Q ss_pred HHhhheeeEEEeeCC
Q 015042 395 LYKYLQIKSVVTPIY 409 (414)
Q Consensus 395 ~~~~~~~k~i~~~~~ 409 (414)
+++|++.|+|+.+.+
T Consensus 467 ~~~~~~~k~v~~~~~ 481 (486)
T 1t90_A 467 VDFYTRKKVVTARYP 481 (486)
T ss_dssp HHHTEEEEEEEEECC
T ss_pred HHHhhceEEEEEecC
Confidence 999999999988764
|
| >3sza_A Aldehyde dehydrogenase, dimeric NADP-preferring; ALDH, rossmann fold, oxidoreductase; 1.48A {Homo sapiens} SCOP: c.82.1.1 PDB: 3szb_A* 1ad3_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.9e-87 Score=677.91 Aligned_cols=397 Identities=29% Similarity=0.420 Sum_probs=366.2
Q ss_pred CHHHHHHHHHhHHHHHHHHHHhcCCChHHHhhchHHHHHHHHHHHHHhhhhhcCcc----cccCCCcccceeecCCceEE
Q 015042 1 MWKFADLIEEHVEELAALDALDAGKVYLRAKTAEIPGAAEFLRFFAGAADKIHGEV----LKMSSELQGYTLREPVGVVG 76 (414)
Q Consensus 1 L~~~a~~l~~~~~~l~~~~~~etGk~~~e~~~~ei~~~~~~l~~~a~~~~~~~~~~----~~~~~~~~~~~~~~P~Gvv~ 76 (414)
|+++++.|++|+++|++++++|+|||..++...|+..+++.++++++......... .....+...+++++|+|||+
T Consensus 46 L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea~~~ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~ 125 (469)
T 3sza_A 46 LEALQRLIQEQEQELVGALAADLHKNEWNAYYEEVVYVLEEIEYMIQKLPEWAADEPVEKTPQTQQDELYIHSEPLGVVL 125 (469)
T ss_dssp HHHHHHHHHHTHHHHHHHHHHHHCCCHHHHHHTTHHHHHHHHHHHHHHHHHHHSCEECCCCGGGTTSEEEEEEEECSEEE
T ss_pred HHHHHHHHHHhHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhcccccCccccCCCccceeeccCCCEEE
Confidence 57899999999999999999999999998766799999998888876654332211 11112446788999999999
Q ss_pred EEcCCccchHHHHHhHHHHHhhCCeEEeecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhhHHHhhhCCCccEEEE
Q 015042 77 HIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLTALYYAHLAKLAGIPDGVLNVVPGFGPTAGAAICSHMDIDYVCF 156 (414)
Q Consensus 77 ~i~p~n~P~~~~~~~~~~aLaaGN~vv~kps~~~~~~~~~l~~~l~~aG~p~g~v~~v~~~~~~~~~~l~~~~~v~~v~~ 156 (414)
+|+|||||+...++++++||++||+||+|||+.+|.++..+++++.++ +|+|++|++++ +.+....|+.| ++|+|+|
T Consensus 126 ~I~PwN~P~~~~~~~~~~ALaaGN~vVlKps~~tp~t~~~l~~l~~~a-lP~gvv~vv~g-~~~~~~~ll~~-~vd~I~F 202 (469)
T 3sza_A 126 VIGTWNYPFNLTIQPMVGAIAAGNAVVLKPSELSENMASLLATIIPQY-LDKDLYPVING-GVPETTELLKE-RFDHILY 202 (469)
T ss_dssp EECCSSSTTHHHHHHHHHHHHTTCEEEEECCTTSHHHHHHHHHHHHHH-SCTTTSCBCCC-SHHHHHHHTTS-CCSEEEE
T ss_pred EECCCcchHHHHHHHHHHHHHcCCEEEEECCCCChHHHHHHHHHHHHh-CCcceEEEEEC-CHHHHHHHHhc-CCCEEEE
Confidence 999999999999999999999999999999999999999999999998 99999999999 44556677777 7999999
Q ss_pred eCCcHHHHHHHHHHHhcccceeEEEcCCCCCceEcCCCCHHHHHHHHHHHhhccCCCCcccCceEEEeCchHHHHHHHHH
Q 015042 157 TGSTDVGRLVMQAAAASNLKQVSLELGGKSPLLIFDDADLDTAADVALLGNLYNKGEICVASSRVFVQEGIYDKFEKKLL 236 (414)
Q Consensus 157 tGs~~~g~~i~~~~a~~~~~~~~~e~gg~~~~iV~~dadl~~aa~~i~~~~~~~~Gq~C~a~~~i~V~~~i~d~f~~~l~ 236 (414)
|||+.+|+.|++.++ ++++|+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|+
T Consensus 203 TGS~~vG~~i~~~aa-~~lkpv~lELGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~ 281 (469)
T 3sza_A 203 TGSTGVGKIIMTAAA-KHLTPVTLELGGKSPCYVDKNCDLDVACRRIAWGKFMNSGQTCVAPDYILCDPSIQNQIVEKLK 281 (469)
T ss_dssp ESCHHHHHHHHHHHH-TTTCCEEEECCCCCEEEECTTSCHHHHHHHHHHHHHGGGGCCTTSCCEEEECGGGHHHHHHHHH
T ss_pred ECCHHHHHHHHHHHh-hccCceEEecCCCCceEECCCCCHHHHHHHHHHHHHhcCCCCCCCCcEEEEehhHHHHHHHHHH
Confidence 999999999999988 8999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhhcccCCCCCCCCcccccCCHHHHHHHHHHHHHHHHcCCEEEeCCcccCCCCceeeeEEEeeCCCcccccccceecc
Q 015042 237 EKAKAWLVGDPFDPTVRQGPQISERHFDRILSYIEHGKREGATLLTGGKPIGDKGYYIEPTIFTNVKEDMIIAKEEIFGP 316 (414)
Q Consensus 237 ~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgP 316 (414)
++++++ +|+|.++++++||+++..+++++.+++ +|+++++||... ..|+|++|||+.+++++|++++||+|||
T Consensus 282 ~~~~~~-~g~~~~~~~~~gpli~~~~~~rv~~~i-----~ga~v~~GG~~~-~~g~~~~PTvl~~v~~~~~i~~eEiFGP 354 (469)
T 3sza_A 282 KSLKEF-YGEDAKKSRDYGRIISARHFQRVMGLI-----EGQKVAYGGTGD-AATRYIAPTILTDVDPQSPVMQEEIFGP 354 (469)
T ss_dssp HHHHHH-HCSCGGGCTTCCCCSCHHHHHHHHHHH-----TTSEEEECCCEE-TTTTEECCEEEESCCTTSGGGTSCCCSS
T ss_pred HHHHHh-cCCCCcccCcccccCCHHHHHHHHHHH-----cCCEEEeCCccC-CCCceeCCeeecCCCCcchhhhccccCC
Confidence 999998 699999999999999999999999998 589999999864 4799999999999999999999999999
Q ss_pred eEEEEeeCCHHHHHHHhhcCCCCceEEEecCCHHHHHHHHHhcceeEEEEcCcCC--CCCCCCcccCCCCCCCccchHHH
Q 015042 317 VMALMKFKTVEEAIKSANNTQYGLAAGIVTKDLNVANTVSRSIRAGIIWINCYFG--FSMDCPYGGYKMSGFGREYGLES 394 (414)
Q Consensus 317 vl~v~~~~~~~eai~~~n~~~~gl~~sv~s~d~~~~~~~~~~l~~g~v~iN~~~~--~~~~~p~gG~~~sG~g~~~g~~~ 394 (414)
|++|++|+|+||||+++|+++|||++||||+|.+.++++++++++|.|+||++.. ..+.+||||+|.||+|+++|.+|
T Consensus 355 Vl~v~~~~~~deAi~~aN~~~~gLaa~v~t~d~~~a~~~~~~l~~G~V~vN~~~~~~~~~~~PfGG~k~SG~Gr~~G~~g 434 (469)
T 3sza_A 355 VLPIVCVRSLEEAIQFINQREKPLALYMFSSNDKVIKKMIAETSSGGVAANDVIVHITLHSLPFGGVGNSGMGSYHGKKS 434 (469)
T ss_dssp EEEEEECSSHHHHHHHHHHSCCCSEEEEECSCHHHHHHHHHHCCCSEEEESCSSGGGSCTTSCBCCCGGGEECCBSTHHH
T ss_pred eEEEEecCCHHHHHHHHHcCCCCceEEEECCCHHHHHHHHHhCCcceEEEeCCCCCCCCCCCCcCCccccccCccchHHH
Confidence 9999999999999999999999999999999999999999999999999999863 46789999999999999999999
Q ss_pred HHhhheeeEEEeeC
Q 015042 395 LYKYLQIKSVVTPI 408 (414)
Q Consensus 395 ~~~~~~~k~i~~~~ 408 (414)
+++||+.|+|+++.
T Consensus 435 ~~~ft~~K~v~~~~ 448 (469)
T 3sza_A 435 FETFSHRRSCLVRP 448 (469)
T ss_dssp HHHTEEEEEEEECC
T ss_pred HHHhhCeeEEEECC
Confidence 99999999998763
|
| >4h7n_A Aldehyde dehydrogenase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, ALDH_ddaldh, COG1012, glyco_hydro_97; 2.00A {Anabaena variabilis} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-87 Score=681.55 Aligned_cols=408 Identities=31% Similarity=0.499 Sum_probs=378.1
Q ss_pred CHHHHHHHHHhHHHHHHHHHHhcCCChHHHhhchHHHHHHHHHHHHHhhhhhcCcccc-c-CCCcccceeecCCceEEEE
Q 015042 1 MWKFADLIEEHVEELAALDALDAGKVYLRAKTAEIPGAAEFLRFFAGAADKIHGEVLK-M-SSELQGYTLREPVGVVGHI 78 (414)
Q Consensus 1 L~~~a~~l~~~~~~l~~~~~~etGk~~~e~~~~ei~~~~~~l~~~a~~~~~~~~~~~~-~-~~~~~~~~~~~P~Gvv~~i 78 (414)
|+++++.|++|+++|++++++|+||+..+ ..|+..+++.+++++....+....... . ..+...+..++|+|||++|
T Consensus 56 L~~~a~~l~~~~~ela~~~~~e~Gk~~~~--~~ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I 133 (474)
T 4h7n_A 56 LQQWKQAILSRREQLTEALVNDTGRLSIT--VLEIDSFLASIDRWCGLAPELLQTSAKNTSIPFIALQQSLVPYPLVGVI 133 (474)
T ss_dssp HHHHHHHHHTTHHHHHHHHHHHHSCSHHH--HHHHHHHHHHHHHHHHHHHHHHCCEEEECSSTTEEEEEEEEECSEEEEE
T ss_pred HHHHHHHHHHHHHHHHHHHHHHcCCcHHH--HHHHHHHHHHHHHHHhhhhhcccccccCCCCCCccceEEEEeccEEEEE
Confidence 57899999999999999999999998653 459999999999998887665443222 1 1344566788999999999
Q ss_pred cCCccchHHHHHhHHHHHhhCCeEEeecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhhHHHhhhCCCccEEEEeC
Q 015042 79 IPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLTALYYAHLAKLAGIPDGVLNVVPGFGPTAGAAICSHMDIDYVCFTG 158 (414)
Q Consensus 79 ~p~n~P~~~~~~~~~~aLaaGN~vv~kps~~~~~~~~~l~~~l~~aG~p~g~v~~v~~~~~~~~~~l~~~~~v~~v~~tG 158 (414)
+|||||+...++++++||++||+||+|||+.+|.++..+.+++.++|+|+|+++++++ +.+.+..|+.| +|+|.|||
T Consensus 134 ~PwNfP~~~~~~~~~~ALaaGN~VVlKps~~tp~~~~~l~~~~~~ag~p~gv~~~v~g-~~~~~~~l~~~--v~~v~FTG 210 (474)
T 4h7n_A 134 SPWNFPLTLSMIDTIPALLAGCAVVVKPSEIAPRFVAPLLMALNTVPELRDVLIFVEG-GGETGANLINY--VDFVCFTG 210 (474)
T ss_dssp ECSSSHHHHHHTTHHHHHHHTCEEEEEECTTSCTTHHHHHHHHTTCTTTTTTEEECCC-CHHHHHHHHTT--CSEEEEES
T ss_pred CCCCcHHHHHhcccCcchhcCCceeecccccCchHHHHHHhhhhhhcccccceeeccc-cchhhhhhhhc--cceEEecc
Confidence 9999999999999999999999999999999999999999999999999999999999 66788888876 89999999
Q ss_pred CcHHHHHHHHHHHhcccceeEEEcCCCCCceEcCCCCHHHHHHHHHHHhhccCCCCcccCceEEEeCchHHHHHHHHHHH
Q 015042 159 STDVGRLVMQAAAASNLKQVSLELGGKSPLLIFDDADLDTAADVALLGNLYNKGEICVASSRVFVQEGIYDKFEKKLLEK 238 (414)
Q Consensus 159 s~~~g~~i~~~~a~~~~~~~~~e~gg~~~~iV~~dadl~~aa~~i~~~~~~~~Gq~C~a~~~i~V~~~i~d~f~~~l~~~ 238 (414)
|+.+|+.|++.++ ++++|+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||++++|+|+++|++.
T Consensus 211 S~~~G~~i~~~aa-~~~~~v~lElGGk~p~iV~~dAdl~~aa~~i~~~~~~n~GQ~C~a~~rv~V~~~i~d~f~~~l~~~ 289 (474)
T 4h7n_A 211 SVATGREVAETAA-RRFIPAYLELGGKDPAIVLESANLELATSAILWGAVVNTGQSCLSIERIYVAESKFEEFYHQLIAK 289 (474)
T ss_dssp CHHHHHHHHHHHH-HHTCCEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCSTTCEEEEEEEGGGHHHHHHHHHHH
T ss_pred ccchhhhhhhhhh-cccccccccCCCcCccccCchhhHHHHHHHHHhhhccCCCCceeecccccchHHHHHHHHHHHHHH
Confidence 9999999999988 889999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhhcccCCCCCCCCcccccCCHHHHHHHHHHHHHHHHcCCEEEeCCcccC-CCCceeeeEEEeeCCCcccccccceecce
Q 015042 239 AKAWLVGDPFDPTVRQGPQISERHFDRILSYIEHGKREGATLLTGGKPIG-DKGYYIEPTIFTNVKEDMIIAKEEIFGPV 317 (414)
Q Consensus 239 ~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~-~~g~~~~Ptvl~~~~~~~~~~~~E~fgPv 317 (414)
++++++|+|.++++++||+++..+++++.+++++++++|+++++||.... ..|+|++|||+.+++++|++++||+||||
T Consensus 290 ~~~~~~g~p~~~~~~~gpli~~~~~~~v~~~i~~a~~~ga~v~~Gg~~~~~~~g~~~~Ptv~~~v~~~~~i~~eEiFGPV 369 (474)
T 4h7n_A 290 AHRLQLAYPLVEDGAIGPIIAEKQAGIINDHILDAVEKGAVIHCGGKVEELGGGWWCRPTVMTNVNHSMKVMTEETFGPI 369 (474)
T ss_dssp HHHCCBCCSSGGGCSBCCCSSHHHHHHHHHHHHHHHHTTCEEEECCCCEEETTEEECCCEEEESCCTTSGGGTSCCCSSE
T ss_pred hhccccCCCcccccccCccccHHHHHHHHHHHHHHHhhCceeccCCcccccCCCcccCceeEEeeccccccccccccCcE
Confidence 99999999999999999999999999999999999999999999998653 46899999999999999999999999999
Q ss_pred EEEEeeCCHHHHHHHhhcCCCCceEEEecCCHHHHHHHHHhcceeEEEEcCcCC--CCCCCCcccCCCCCCC-ccchHHH
Q 015042 318 MALMKFKTVEEAIKSANNTQYGLAAGIVTKDLNVANTVSRSIRAGIIWINCYFG--FSMDCPYGGYKMSGFG-REYGLES 394 (414)
Q Consensus 318 l~v~~~~~~~eai~~~n~~~~gl~~sv~s~d~~~~~~~~~~l~~g~v~iN~~~~--~~~~~p~gG~~~sG~g-~~~g~~~ 394 (414)
++|++|+|+||||+++|+++|||++||||+|.++++++++++++|+|+||+... ..+..||||+|.||+| +++|.+|
T Consensus 370 l~v~~~~~~deAi~~aN~~~~GL~a~v~t~d~~~a~~~a~~l~aG~v~iN~~~~~~~~~~~pfgG~~~SG~G~~~~G~~g 449 (474)
T 4h7n_A 370 MPVMPFPDVEEAVYLANDTIYGLSAAVFAGSEDEALKVARQLNAGAISINDAALTAMMHEGEKNAFNFSGLGGSRVGAAG 449 (474)
T ss_dssp EEEEEESSHHHHHHHHHCSSCCSEEEEECSSHHHHHHHHTTSCCSEEEESSSCGGGTCCCSCCCCCGGGEESCCSSTTHH
T ss_pred EEEEEECCHHHHHHHHHcCCCCCeEEEEeCCHHHHHHHHHhCCeeEEEECCCCccCCcCCCCCCCcCCCCCCCCcchHHH
Confidence 999999999999999999999999999999999999999999999999998764 4578999999999998 7899999
Q ss_pred HHhhheeeEEEeeCC--CCCCC
Q 015042 395 LYKYLQIKSVVTPIY--NSPWL 414 (414)
Q Consensus 395 ~~~~~~~k~i~~~~~--~~~~~ 414 (414)
+++|+++|+|+++.. .+||+
T Consensus 450 ~~~f~~~k~v~~~~~~~~~p~w 471 (474)
T 4h7n_A 450 LKRFLRKQAFLIKTNSTSDPWW 471 (474)
T ss_dssp HHTTEEEEEEEEECSSSCCTTS
T ss_pred HHHhCeEEEEEECCCCCCCCCC
Confidence 999999999998754 56764
|
| >4e3x_A Delta-1-pyrroline-5-carboxylate dehydrogenase, mitochondrial; amino acid metabolism, proline inhibition, oxidoreductase; HET: 16P PGE; 1.24A {Mus musculus} PDB: 3v9k_A* 3v9l_A* 3v9j_A* 3v9g_A 3v9h_A 3v9i_A | Back alignment and structure |
|---|
Probab=100.00 E-value=4.4e-87 Score=686.22 Aligned_cols=407 Identities=27% Similarity=0.434 Sum_probs=378.0
Q ss_pred CHHHHHHHHHh-HHHHHHHHHHhcCCChHHHhhchHHHHHHHHHHHHHhhhhhcCcccc-cCCCcccceeecCCceEEEE
Q 015042 1 MWKFADLIEEH-VEELAALDALDAGKVYLRAKTAEIPGAAEFLRFFAGAADKIHGEVLK-MSSELQGYTLREPVGVVGHI 78 (414)
Q Consensus 1 L~~~a~~l~~~-~~~l~~~~~~etGk~~~e~~~~ei~~~~~~l~~~a~~~~~~~~~~~~-~~~~~~~~~~~~P~Gvv~~i 78 (414)
|+++++.|+++ +++|++++++|+|||..++...++..+++.+++++..++++.+.... ...+...+.++.|+|||++|
T Consensus 128 L~~~a~~l~~~~~~el~~~~~~e~Gk~~~ea~~e~v~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~r~p~GVV~~I 207 (563)
T 4e3x_A 128 FLKAADMLSGPRRAEVLAKTMVGQGKTVIQAEIDAAAELIDFFRFNAKFAVELEGEQPISVPPSTNHTVYRGLEGFVAAI 207 (563)
T ss_dssp HHHHHHHHHTTTHHHHHHHHHHHHCCCHHHHHHHTTHHHHHHHHHHHHHHHHHTTCCCCCCTTEEEEEECCBCSSEEEEE
T ss_pred HHHHHHHHHhccHHHHHHHHHHHcCCCHHHHhHHHHHHHHHHHHHHHHHHHHhhCCCccCCCCCcceEEEecCceEEEEE
Confidence 57899999999 99999999999999999865434999999999999998877654321 12234456778889999999
Q ss_pred cCCccchHHHHHhHHHHHhhCCeEEeecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhhHHHhhhCCCccEEEEeC
Q 015042 79 IPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLTALYYAHLAKLAGIPDGVLNVVPGFGPTAGAAICSHMDIDYVCFTG 158 (414)
Q Consensus 79 ~p~n~P~~~~~~~~~~aLaaGN~vv~kps~~~~~~~~~l~~~l~~aG~p~g~v~~v~~~~~~~~~~l~~~~~v~~v~~tG 158 (414)
+|||||+....+++++|| +||+||+|||+.+|+++..++++|.++|+|+|+||++++++.++++.|+.||+|++|.|||
T Consensus 208 ~PwNfP~~~~~~~~apAL-aGNtVVlKPs~~tp~sa~~l~~ll~eAGlP~Gvvnvv~g~g~~~g~~L~~hp~v~~I~FTG 286 (563)
T 4e3x_A 208 SPFNFTAIGGNLAGAPAL-MGNVVLWKPSDTAMLASYAVYRILREAGLPPNIIQFVPADGPTFGDTVTSSEHLCGINFTG 286 (563)
T ss_dssp CCSSCHHHHHHHHHHHHH-TTCCEEEECCGGGHHHHHHHHHHHHHTTCCTTSEEECCCCHHHHHHHHTTCTTEEEEEEES
T ss_pred CCchHHHHHHHHHHHHhh-cCCEEEEECCCCChHHHHHHHHHHHHhCCCCCeEEEEeCCcHHHHHHHHhCCCcCEEEEEC
Confidence 999999999999999999 5999999999999999999999999999999999999998888999999999999999999
Q ss_pred CcHHHHHHHHHHHhcccc------eeEEEcCCCCCceEcCCCCHHHHHHHHHHHhhccCCCCcccCceEEEeCchHHHHH
Q 015042 159 STDVGRLVMQAAAASNLK------QVSLELGGKSPLLIFDDADLDTAADVALLGNLYNKGEICVASSRVFVQEGIYDKFE 232 (414)
Q Consensus 159 s~~~g~~i~~~~a~~~~~------~~~~e~gg~~~~iV~~dadl~~aa~~i~~~~~~~~Gq~C~a~~~i~V~~~i~d~f~ 232 (414)
|+.+|+.|++.++ .+++ |+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|+|||+++||+|+
T Consensus 287 St~vG~~i~~~aa-~~lk~~~~~prv~lElGGk~p~IV~~dADld~Aa~~iv~~~f~~~GQ~C~A~~rv~V~~si~d~f~ 365 (563)
T 4e3x_A 287 SVPTFKHLWRQVA-QNLDRFRTFPRLAGECGGKNFHFVHSSADVDSVVSGTLRSAFEYGGQKCSACSRLYVPKSLWPQIK 365 (563)
T ss_dssp CHHHHHHHHHHHH-HTTTTCSSCCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCSTTCEEEEEEEGGGHHHHH
T ss_pred CHHHHHHHHHHHH-hhCCccccCCceeccCCCCCceeeCCCCCHHHHHHHHHHHHHhcCCCCCcCCcEEEEecchHHHHH
Confidence 9999999999988 6676 59999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhhcccCCC-CCCCCcccccCCHHHHHHHHHHHHHHHH-cCCEEEeCCcccCCCCceeeeEEEeeCCCcccccc
Q 015042 233 KKLLEKAKAWLVGDP-FDPTVRQGPQISERHFDRILSYIEHGKR-EGATLLTGGKPIGDKGYYIEPTIFTNVKEDMIIAK 310 (414)
Q Consensus 233 ~~l~~~~~~~~~g~~-~~~~~~~gpl~~~~~~~~~~~~i~~a~~-~ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~ 310 (414)
++|+++++++++|+| .|+++++||+++..+++++.++|+++++ +|+++++||......|+|++|||+.+++++|.+++
T Consensus 366 ~~l~~~~~~l~vGdp~~d~~~~~Gpli~~~~~~rv~~~i~~a~~~~ga~v~~GG~~~~~~G~fv~PTvl~~v~~~~~i~~ 445 (563)
T 4e3x_A 366 GRLLEEHSRIKVGDPAEDFGTFFSAVIDAKAFARIKKWLEHARSSPSLSILAGGQCNESVGYYVEPCIIESKDPQEPIMK 445 (563)
T ss_dssp HHHHHHHHTCCBSCTTTCTTCSBCCCSCHHHHHHHHHHHHHHHHCTTEEEEECCCEECSSSCEECCEEEEESCTTCGGGT
T ss_pred HHHHHHHHhccCCCcccCcCCccCCCcCHHHHHHHHHHHHHHhhcCCCEEEeCCccCCCCCcEecCEEEecCCCCChhhc
Confidence 999999999999999 9999999999999999999999999996 89999999987666899999999999999999999
Q ss_pred cceecceEEEEeeCC--HHHHHHHh-hcCCCCceEEEecCCHHHHHHHHHhcc--eeEEEEcCcCC--CCCCCCcccCCC
Q 015042 311 EEIFGPVMALMKFKT--VEEAIKSA-NNTQYGLAAGIVTKDLNVANTVSRSIR--AGIIWINCYFG--FSMDCPYGGYKM 383 (414)
Q Consensus 311 ~E~fgPvl~v~~~~~--~~eai~~~-n~~~~gl~~sv~s~d~~~~~~~~~~l~--~g~v~iN~~~~--~~~~~p~gG~~~ 383 (414)
||+||||++|++|+| +||||+++ |+++|||+++|||+|.+.+++++++++ +|+|+||+.+. ..+.+||||+|.
T Consensus 446 eEiFGPVl~V~~~~d~~~deAi~~ann~s~yGLta~V~t~d~~~~~~~~~~l~~~aG~v~IN~~~~~~~~~~~PFGG~k~ 525 (563)
T 4e3x_A 446 EEIFGPVLTVYVYPDDKYRETLKLVDSTTSYGLTGAVFAQDKAIVQEATRMLRNAAGNFYINDKSTGSVVGQQPFGGARA 525 (563)
T ss_dssp SCCCSSEEEEEEECGGGHHHHHHHHHHSSSEESEEEEECSCHHHHHHHHHHTTTTCSEEEESSCSCCCCTTTSCCCCEET
T ss_pred CCCcCeEEEEEEECCCCHHHHHHHHHcCCCCCCEEEEEeCCHHHHHHHHHhhhcCeeEEEEcCCCCCCCcCCCCCCCccc
Confidence 999999999999997 79999999 789999999999999999999999976 99999999764 357899999999
Q ss_pred CCCC-ccchHHHHHhhheeeEEEeeCC
Q 015042 384 SGFG-REYGLESLYKYLQIKSVVTPIY 409 (414)
Q Consensus 384 sG~g-~~~g~~~~~~~~~~k~i~~~~~ 409 (414)
||+| +.+|++++++|+++|+|..++.
T Consensus 526 SG~g~~~~G~~~l~~~~~~k~v~~~~~ 552 (563)
T 4e3x_A 526 SGTNDKPGGPHYILRWTSPQVIKETHK 552 (563)
T ss_dssp TBCCCCTTSTTGGGGGBCCEEEEEECS
T ss_pred cCCCCccCCHHHHHHhCceEEEEEeCc
Confidence 9998 8999999999999999998873
|
| >3lns_A Benzaldehyde dehydrogenase; oxidoreductase, NADP+, class 3 aldehyde dehyd adduct, covalent catalysis, mandelate racemase pathway; HET: ZBZ NAP; 2.50A {Pseudomonas putida} PDB: 3lv1_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-85 Score=664.42 Aligned_cols=394 Identities=29% Similarity=0.451 Sum_probs=366.3
Q ss_pred CHHHHHHHHHhHHHHHHHHHHhcCCChHHHhhchHHHHHHHHHHHHHhhhhhcCc-cccc---CCCcccceeecCCceEE
Q 015042 1 MWKFADLIEEHVEELAALDALDAGKVYLRAKTAEIPGAAEFLRFFAGAADKIHGE-VLKM---SSELQGYTLREPVGVVG 76 (414)
Q Consensus 1 L~~~a~~l~~~~~~l~~~~~~etGk~~~e~~~~ei~~~~~~l~~~a~~~~~~~~~-~~~~---~~~~~~~~~~~P~Gvv~ 76 (414)
|+++++.|++|+++|++++++|+|||..++...|+..+++.+++++...++.... .... ..+...+.+++|+|||+
T Consensus 56 L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea~~~ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~ 135 (457)
T 3lns_A 56 LERLKEAVINNKEALYSALAEDLGKPKDVVDLAEIGAVLHEIDFALAHLDEWVAPVSVPSPDIIAPSECYVVQEPYGVTY 135 (457)
T ss_dssp HHHHHHHHHTTHHHHHHHHHHHHCCCHHHHHHHTHHHHHHHHHHHHHHHHHHTSCEEECCCGGGCSCEEEEEEEECCEEE
T ss_pred HHHHHHHHHHhHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhccccccccccCCCcceEEEeecceEEE
Confidence 5789999999999999999999999999876569999999999999887665432 1211 13456789999999999
Q ss_pred EEcCCccchHHHHHhHHHHHhhCCeEEeecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhhHHHhhhCCCccEEEE
Q 015042 77 HIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLTALYYAHLAKLAGIPDGVLNVVPGFGPTAGAAICSHMDIDYVCF 156 (414)
Q Consensus 77 ~i~p~n~P~~~~~~~~~~aLaaGN~vv~kps~~~~~~~~~l~~~l~~aG~p~g~v~~v~~~~~~~~~~l~~~~~v~~v~~ 156 (414)
+|+|||||+...++++++||++||+||+|||+.+|.++..+++++.++ +|+|++|++++ +.+.++.|+. ++||+|+|
T Consensus 136 ~I~PwN~P~~~~~~~~~~ALaaGN~VVlKps~~tp~t~~~l~~l~~~a-lP~gvv~vv~g-~~~~~~~L~~-~~vd~V~f 212 (457)
T 3lns_A 136 IIGPFNYPVNLTLTPLIGAIIGGNTCIIKPSETTPETSAVIEKIIAEA-FAPEYVAVIQG-GRDENSHLLS-LPFDFIFF 212 (457)
T ss_dssp EECCSSSTTHHHHHHHHHHHHTTCEEEEECCTTCHHHHHHHHHHHHHH-CCTTTEEECCC-CHHHHHHHTT-SCCSEEEE
T ss_pred EECCCcchHHHHHHHHHHHHHcCCEEEEECCCCChHHHHHHHHHHHHh-CCHhhEEEecC-CHHHHHHHhc-CCCCEEEE
Confidence 999999999999999999999999999999999999999999999999 99999999999 7788899988 78999999
Q ss_pred eCCcHHHHHHHHHHHhcccceeEEEcCCCCCceEcCCCCHHHHHHHHHHHhhccCCCCcccCceEEEeCchHHHHHHHHH
Q 015042 157 TGSTDVGRLVMQAAAASNLKQVSLELGGKSPLLIFDDADLDTAADVALLGNLYNKGEICVASSRVFVQEGIYDKFEKKLL 236 (414)
Q Consensus 157 tGs~~~g~~i~~~~a~~~~~~~~~e~gg~~~~iV~~dadl~~aa~~i~~~~~~~~Gq~C~a~~~i~V~~~i~d~f~~~l~ 236 (414)
|||+.+|+.|++.++ ++++|+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|+
T Consensus 213 TGS~~~G~~i~~~aa-~~l~pv~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~ 291 (457)
T 3lns_A 213 TGSPNVGKVVMQAAA-KHLTPVVLELGGKCPLIVLPDADLDQTVNQLMFGKFINSGQTXIAPDYLYVHYSVKDALLERLV 291 (457)
T ss_dssp ESCHHHHHHHHHHHH-TTTCCEEEECCCCEEEEECTTCCHHHHHHHHHHHHHGGGGCCTTSEEEEEEEGGGHHHHHHHHH
T ss_pred ECCHHHHHHHHHHHh-hccCceEEECCCCCCCeECCCCCHHHHHHHHHHHHHHhCCCCccCCceEEEcHHHHHHHHHHHH
Confidence 999999999999988 8999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhhcccCCCCCCCCcccccCCHHHHHHHHHHHHHHHHcCCEEEeCCcccCCCCceeeeEEEeeCCCcccccccceecc
Q 015042 237 EKAKAWLVGDPFDPTVRQGPQISERHFDRILSYIEHGKREGATLLTGGKPIGDKGYYIEPTIFTNVKEDMIIAKEEIFGP 316 (414)
Q Consensus 237 ~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgP 316 (414)
+.+++++ |.++ ++||+++..+++++.++++++. +++++||... ..|+|+.|||+.+++++|.+++||+|||
T Consensus 292 ~~~~~~~---p~~~--~~gpli~~~~~~rv~~~i~~a~---~~~~~gg~~~-~~g~~~~Ptvl~~v~~~~~i~~eEiFGP 362 (457)
T 3lns_A 292 ERVKTEL---PEIN--STGKLVTERQVQRLVSLLEATQ---GQVLVGSQAD-VSKRALSATVVDGVEWNDPLMSEELFGP 362 (457)
T ss_dssp HHHHHHC---CSTT--TTCCCSSHHHHHHHHHHHHHCC---SEEEECCCEE-GGGTEECCEEEESCCTTSGGGSSCCCSS
T ss_pred HHHHhcC---CCcc--cccCCCCHHHHHHHHHHHHhcC---CeEEeCCccC-CCCceeCCEEEecCCCCChhhcCcccCc
Confidence 9999987 6665 9999999999999999999863 5999999754 3689999999999999999999999999
Q ss_pred eEEEEeeCCHHHHHHHhhc-CCCCceEEEecCCHHHHHHHHHhcceeEEEEcCcCC--CCCCCCcccCCCCCCCccchHH
Q 015042 317 VMALMKFKTVEEAIKSANN-TQYGLAAGIVTKDLNVANTVSRSIRAGIIWINCYFG--FSMDCPYGGYKMSGFGREYGLE 393 (414)
Q Consensus 317 vl~v~~~~~~~eai~~~n~-~~~gl~~sv~s~d~~~~~~~~~~l~~g~v~iN~~~~--~~~~~p~gG~~~sG~g~~~g~~ 393 (414)
|++|++|+|+||||+++|+ ++|||++||||+|.+.++++++++++|+|+||++.. ..+.+||||+|.||+|+++|.+
T Consensus 363 Vl~v~~~~~~deAi~~aN~~~~~gL~a~v~t~d~~~a~~~~~~l~aG~v~vN~~~~~~~~~~~PfGG~k~SG~G~~~g~~ 442 (457)
T 3lns_A 363 ILPVLEFDSVRTAIDQVNKHHPKPLAVYVFGKDMDVAKGIINQIQSGDAQVNGVMLHAFSPYLPFGGIGASGMGEYHGHF 442 (457)
T ss_dssp EEEEEEESCHHHHHHHHHHHSCSCSEEEEECSCHHHHHHHHHTSCCSEEEESCCSGGGGCTTSCBCCCGGGEECCBSHHH
T ss_pred EEEEEEeCCHHHHHHHHHcCCCCCeEEEEECCCHHHHHHHHHhCCcceEEEcCCCCCCCCCCCCcCCcCcCCCCCCchHH
Confidence 9999999999999999999 999999999999999999999999999999999854 5688999999999999999999
Q ss_pred HHHhhheeeEEEee
Q 015042 394 SLYKYLQIKSVVTP 407 (414)
Q Consensus 394 ~~~~~~~~k~i~~~ 407 (414)
|+++||+.|+|++.
T Consensus 443 ~~~~f~~~k~v~~~ 456 (457)
T 3lns_A 443 SYLTFTHKKSVRIV 456 (457)
T ss_dssp HHHHTEEEEEEEEC
T ss_pred HHHHhhCeeEEEeC
Confidence 99999999998753
|
| >3ju8_A Succinylglutamic semialdehyde dehydrogenase; alpha-beta structure, structural genomics, PSI-2, protein ST initiative; HET: NAD; 1.82A {Pseudomonas aeruginosa} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-85 Score=668.74 Aligned_cols=398 Identities=28% Similarity=0.419 Sum_probs=373.4
Q ss_pred CHHHHHHHHHhHHHHHHHHHHhcCCChHHHhhchHHHHHHHHHHHHHhhhhhcCcccccCCCcccceeecCCceEEEEcC
Q 015042 1 MWKFADLIEEHVEELAALDALDAGKVYLRAKTAEIPGAAEFLRFFAGAADKIHGEVLKMSSELQGYTLREPVGVVGHIIP 80 (414)
Q Consensus 1 L~~~a~~l~~~~~~l~~~~~~etGk~~~e~~~~ei~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p 80 (414)
|+++++.|++|+++|++++++|+|||..++. .|+..+++.+++++...++..+...+...+...+.+++|+|||++|+|
T Consensus 70 L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea~-~ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~P 148 (490)
T 3ju8_A 70 LERFAATLKSRADELARVIGEETGKPLWESA-TEVTSMVNKVAISVQAFRERTGEKSGPLADATAVLRHKPHGVVAVFGP 148 (490)
T ss_dssp HHHHHHHHHHTHHHHHHHHHHHHCCCHHHHH-HHHHHHHHHHHHHHHHHHHHSCCEEEEETTEEEEEEEEECSEEEEECC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCCHHHHH-HHHHHHHHHHHHHHHHHHHhcCCccccCCCCeeeEEECCCCEEEEECC
Confidence 5789999999999999999999999999864 699999999999998887766554432234456777999999999999
Q ss_pred CccchHHHHHhHHHHHhhCCeEEeecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhhHHHhhhCCCccEEEEeCCc
Q 015042 81 WNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLTALYYAHLAKLAGIPDGVLNVVPGFGPTAGAAICSHMDIDYVCFTGST 160 (414)
Q Consensus 81 ~n~P~~~~~~~~~~aLaaGN~vv~kps~~~~~~~~~l~~~l~~aG~p~g~v~~v~~~~~~~~~~l~~~~~v~~v~~tGs~ 160 (414)
||||+...++++++||++||+||+|||+.+|.++..+.+++.++|+|+|++|++++ +.+.++.|+.||+||+|+||||+
T Consensus 149 wN~P~~~~~~~~~~ALaaGN~VVlKps~~tp~t~~~l~~l~~~aGlP~gvv~vv~g-~~~~~~~L~~~~~v~~V~fTGS~ 227 (490)
T 3ju8_A 149 YNFPGHLPNGHIVPALLAGNCVVFKPSELTPKVAELTLKAWIQAGLPAGVLNLVQG-GRETGVALAAHRGLDGLFFTGSS 227 (490)
T ss_dssp SSSTTHHHHHHHHHHHHHTCEEEEECCTTCHHHHHHHHHHHHHTTCCTTTEEECCC-SHHHHHHHHTCTTCSEEEEESCH
T ss_pred CcchHHHHHHHHHHHHHcCCeEEEECCCCCcHHHHHHHHHHHHhCcCcCeEEEEeC-CHHHHHHHHhCCCcCEEEEECcH
Confidence 99999999999999999999999999999999999999999999999999999999 67899999999999999999999
Q ss_pred HHHHHHHHHHHhccccee-EEEcCCCCCceEcCCCCHHHHHHHHHHHhhccCCCCcccCceEEEeCch-HHHHHHHHHHH
Q 015042 161 DVGRLVMQAAAASNLKQV-SLELGGKSPLLIFDDADLDTAADVALLGNLYNKGEICVASSRVFVQEGI-YDKFEKKLLEK 238 (414)
Q Consensus 161 ~~g~~i~~~~a~~~~~~~-~~e~gg~~~~iV~~dadl~~aa~~i~~~~~~~~Gq~C~a~~~i~V~~~i-~d~f~~~l~~~ 238 (414)
.+|+.|++.++ .+++|+ ++|+|||||+||++|||++.|++.+++++|.|+||.|++++++|||+++ +|+|+++|+++
T Consensus 228 ~~g~~i~~~aa-~~~~~v~~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~~i~d~f~~~l~~~ 306 (490)
T 3ju8_A 228 RTGNLLHSQFG-GQPQKILALEMGGNNPLVVEEVADLDAAVYTIIQSAFISAGQRCTCARRLLVPQGAWGDALLARLVAV 306 (490)
T ss_dssp HHHHHHHHHTT-TCTTSEEEEECCCCEEEEECCCSCHHHHHHHHHHHHHGGGGCSTTSEEEEEEESSHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhh-ccCCCcEEeecCCCCeEEECCCCCHHHHHHHHHHHHHhcCCCCCcCCCEEEEECCccHHHHHHHHHHH
Confidence 99999999987 888998 8999999999999999999999999999999999999999999999996 99999999999
Q ss_pred HhhcccCC-CCCCCCcccccCCHHHHHHHHHHHHHHHHcCCEEEeCCcccCCCCceeeeEEEeeCCCcccccccceecce
Q 015042 239 AKAWLVGD-PFDPTVRQGPQISERHFDRILSYIEHGKREGATLLTGGKPIGDKGYYIEPTIFTNVKEDMIIAKEEIFGPV 317 (414)
Q Consensus 239 ~~~~~~g~-~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPv 317 (414)
++++++|+ |.++++++||+++..+++++.+++++++++|+++++||...+..|+|++|||+. ++++|.+++||+||||
T Consensus 307 ~~~~~~G~~~~~~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~~~~gg~~~~~~g~~~~PTvl~-v~~~~~i~~eEiFGPV 385 (490)
T 3ju8_A 307 SATLRVGRFDEQPAPFMGAVISLSAAEHLLKAQEHLIGKGAQPLLAMTQPIDGAALLTPGILD-VSAVAERPDEEFFGPL 385 (490)
T ss_dssp HHHCCBCCTTCSSCCSBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCCCCSTTSCCCCCEEEE-CTTCSSCCCCCCCSSE
T ss_pred HHhccCCCCCCCCcCccccccCHHHHHHHHHHHHHHHHCCCEEEECCCccCCCCCEEccEEEE-eCCCCccccccccccE
Confidence 99999999 999999999999999999999999999999999999998766689999999998 9999999999999999
Q ss_pred EEEEeeCCHHHHHHHhhcCCCCceEEEecCCHHHHHHHHHhcceeEEEEcCcCC-CCCCCCcccCCCCCCCccchHHHHH
Q 015042 318 MALMKFKTVEEAIKSANNTQYGLAAGIVTKDLNVANTVSRSIRAGIIWINCYFG-FSMDCPYGGYKMSGFGREYGLESLY 396 (414)
Q Consensus 318 l~v~~~~~~~eai~~~n~~~~gl~~sv~s~d~~~~~~~~~~l~~g~v~iN~~~~-~~~~~p~gG~~~sG~g~~~g~~~~~ 396 (414)
++|++|+|+||||+++|+++|||++||||+|.+.++++++++++|+|+||++.. ..+.+||||+|.||.+ +++
T Consensus 386 l~v~~~~~~~eAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~v~vN~~~~~~~~~~PfGG~~~SG~~------~~~ 459 (490)
T 3ju8_A 386 LQVIRYSDFAAAIREANATQYGLAAGLLSDSRERFEQFLVESRAGIVNWNKQLTGAASSAPFGGIGASGNH------RPS 459 (490)
T ss_dssp EEEEEESSHHHHHHHHHCSSCCSEEEEECSCHHHHHHHHHHCCSSEEEESSCSSCCCTTSEECCCGGGBSS------CCE
T ss_pred EEEEEeCCHHHHHHHHhcCCCCceEEEEcCCHHHHHHHHHhcCcceEEECCCcCCCCCCCCcCCccccchh------HHH
Confidence 999999999999999999999999999999999999999999999999999875 4578999999999985 589
Q ss_pred hhheeeEEEeeC
Q 015042 397 KYLQIKSVVTPI 408 (414)
Q Consensus 397 ~~~~~k~i~~~~ 408 (414)
+|++.|+|+++.
T Consensus 460 ~~~~~k~v~~~~ 471 (490)
T 3ju8_A 460 AYYAADYCAYPV 471 (490)
T ss_dssp ETTHHHHHEEEE
T ss_pred hhheeEEEEEec
Confidence 999999988764
|
| >4f9i_A Proline dehydrogenase/delta-1-pyrroline-5-carboxy dehydrogenase; proline utilization A, PUTA, flavoenzyme, structural genomic biology; HET: FAD MES; 2.20A {Geobacter sulfurreducens} | Back alignment and structure |
|---|
Probab=100.00 E-value=4.5e-85 Score=705.78 Aligned_cols=407 Identities=33% Similarity=0.541 Sum_probs=382.8
Q ss_pred CHHHHHHHHHhHHHHHHHHHHhcCCChHHHhhchHHHHHHHHHHHHHhhhhhcCccccc-CCCcccceeecCCceEEEEc
Q 015042 1 MWKFADLIEEHVEELAALDALDAGKVYLRAKTAEIPGAAEFLRFFAGAADKIHGEVLKM-SSELQGYTLREPVGVVGHII 79 (414)
Q Consensus 1 L~~~a~~l~~~~~~l~~~~~~etGk~~~e~~~~ei~~~~~~l~~~a~~~~~~~~~~~~~-~~~~~~~~~~~P~Gvv~~i~ 79 (414)
|+++++.|++|+++|++++++|+|||..++ ..|+..+++.+++++.+++++.+..... ..+..++..++|+|||++|+
T Consensus 596 L~~~Adll~~~~~eLa~~~~~E~GK~~~ea-~~Ev~~aid~lr~~a~~~~~~~~~~~~~~~~g~~~~~~~~PlGVV~~I~ 674 (1026)
T 4f9i_A 596 LLKAAQAARKRLFELSAWQVLEIGKQWDQA-YADVTEAIDFLEYYAREMIRLGQPQRVGHAPGELNHYFYEPKGVAAVIA 674 (1026)
T ss_dssp HHHHHHHHHHTHHHHHHHHHHHTCCCHHHH-HHHHHHHHHHHHHHHHHHHHHTSCEEECCCTTEEEEEEEEECSEEEEEC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCChhhH-HHHHHHHHHHHHHHHHHHHHhcCCccccCCCCccceeEeecCceEEEeC
Confidence 578999999999999999999999999975 5699999999999999988775543322 34567788999999999999
Q ss_pred CCccchHHHHHhHHHHHhhCCeEEeecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhhHHHhhhCCCccEEEEeCC
Q 015042 80 PWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLTALYYAHLAKLAGIPDGVLNVVPGFGPTAGAAICSHMDIDYVCFTGS 159 (414)
Q Consensus 80 p~n~P~~~~~~~~~~aLaaGN~vv~kps~~~~~~~~~l~~~l~~aG~p~g~v~~v~~~~~~~~~~l~~~~~v~~v~~tGs 159 (414)
|||||+...++++++||++||+||+|||+.+|+++..+++++.++|+|+|++|++++++.++++.|+.||+|++|+||||
T Consensus 675 PwNfPl~i~~~~~a~ALaaGNtVVlKPse~tplsa~~l~ell~eAGlP~gvvnvV~G~g~~vg~~L~~hp~v~~V~FTGS 754 (1026)
T 4f9i_A 675 PWNFPLAISMGMASAAIVTGNCVVFKPSGITSIIGWHLVELFREAGLPEGVFNFTPGRGSVMGDYLVDHPDISLIAFTGS 754 (1026)
T ss_dssp CSSSTTHHHHHHHHHHHHTTCEEEEECCGGGHHHHHHHHHHHHHTTCCTTSEEECCCCHHHHHHHHHHCTTEEEEEEESC
T ss_pred CCccHHHHHHHHHHHHHHcCCEEEEEcCccchHHHHHHHHHHHHhCcCCCeEEEEecCcHHHHHHHHhCCCCCEEEeCCC
Confidence 99999999999999999999999999999999999999999999999999999999988889999999999999999999
Q ss_pred cHHHHHHHHHHHh-----cccceeEEEcCCCCCceEcCCCCHHHHHHHHHHHhhccCCCCcccCceEEEeCchHHHHHHH
Q 015042 160 TDVGRLVMQAAAA-----SNLKQVSLELGGKSPLLIFDDADLDTAADVALLGNLYNKGEICVASSRVFVQEGIYDKFEKK 234 (414)
Q Consensus 160 ~~~g~~i~~~~a~-----~~~~~~~~e~gg~~~~iV~~dadl~~aa~~i~~~~~~~~Gq~C~a~~~i~V~~~i~d~f~~~ 234 (414)
+.+|+.|++.++. ++++|+++|+|||||+||++|||++.|++.+++|+|.|+||.|++++++|||++++|+|+++
T Consensus 755 t~vg~~I~~~aa~~~~~~~~lkpv~lElGGknp~IV~~dADld~Aa~~iv~saf~~aGQ~C~A~~rl~V~~~i~d~f~~~ 834 (1026)
T 4f9i_A 755 METGLRIIERAAKVHPGQANVKKIISEMGGKNAIIIDDDADLDEAVPHVLYSAFGFQGQKCSACSRVIVLDAVYDKFIER 834 (1026)
T ss_dssp HHHHHHHHHHHTSCCTTCCSCCEEEEECCCCEEEEECTTCCHHHHHHHHHHHHHGGGGCSTTCEEEEEEEGGGHHHHHHH
T ss_pred HHHHHHHHHHhhcccccccCccceEEecCCCCeEEECCCCCHHHHHHHHHHHHHhCCCCCCCCCceEEecHHHHHHHHHH
Confidence 9999999998862 46799999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhhcccCCCCCCCCcccccCCHHHHHHHHHHHHHHHHcCCEEEeCCcccCCCCceeeeEEEeeCCCccccccccee
Q 015042 235 LLEKAKAWLVGDPFDPTVRQGPQISERHFDRILSYIEHGKREGATLLTGGKPIGDKGYYIEPTIFTNVKEDMIIAKEEIF 314 (414)
Q Consensus 235 l~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~f 314 (414)
|++.++++++|+|.++++++||+++..+++++.++|++++++| ++++||......|+|+.|||+.++++++.+++||+|
T Consensus 835 L~~~~~~l~vG~p~d~~t~~Gpvi~~~~~~~v~~~i~~a~~~G-~~v~gG~~~~~~G~fv~PTvl~~v~~~~~i~~eEiF 913 (1026)
T 4f9i_A 835 LVSMAKATKVGPSEDPANYMGAVADDKAMKSIKEYAEIGKREG-HVLYESPVPAGEGYFVPMTIIGGIKPEHRIAQEEIF 913 (1026)
T ss_dssp HHHHHHHCCBCCTTSTTCSBCCCSSHHHHHHHHHHHHHHHHHS-EEEEECCCCSSSSCCCCCEEEESCCTTSGGGTSCCC
T ss_pred HHHHHHhcccCCcccccCccccccCHHHHHHHHHHHHHHHhCC-eEEecCCcCCCCCceecceeeecCCCCccccCceec
Confidence 9999999999999999999999999999999999999999998 999999765445999999999999999999999999
Q ss_pred cceEEEEeeCCHHHHHHHhhcCCCCceEEEecCCHHHHHHHHHhcceeEEEEcCcCC--CCCCCCcccCCCCCCC-ccch
Q 015042 315 GPVMALMKFKTVEEAIKSANNTQYGLAAGIVTKDLNVANTVSRSIRAGIIWINCYFG--FSMDCPYGGYKMSGFG-REYG 391 (414)
Q Consensus 315 gPvl~v~~~~~~~eai~~~n~~~~gl~~sv~s~d~~~~~~~~~~l~~g~v~iN~~~~--~~~~~p~gG~~~sG~g-~~~g 391 (414)
|||++|++|+|+||||+++|+++|||+++|||+|.+.++++++++++|+|+||+.+. ..+.+||||+|.||+| +.+|
T Consensus 914 GPVl~V~~~~d~deAI~~aN~t~yGLt~~V~t~d~~~a~~~~~~l~aG~v~IN~~~~~~~~~~~PFGG~k~SG~G~~~gG 993 (1026)
T 4f9i_A 914 GPVLAVMRAKDFDQAIEWANSTQFALTGGIFSRSPEHLAKARREFRVGNLYINRNNTGALVERQPFGGARMSGVGTKAGG 993 (1026)
T ss_dssp SSEEEEEEESSHHHHHHHHTCSSCCSEEEEECCCHHHHHHHHHHSCCSEEEESSCSCCCCTTTSCBCCCGGGBSSCCBTS
T ss_pred CcEEEEEEeCCHHHHHHHHHcCCCCCeEEEECCCHHHHHHHHHhCCEeeEEEcCCCCCCCCCCCCCCCcCcCCCCCCcCC
Confidence 999999999999999999999999999999999999999999999999999999765 3478999999999999 5789
Q ss_pred HHHHHhhheeeEEEeeCC
Q 015042 392 LESLYKYLQIKSVVTPIY 409 (414)
Q Consensus 392 ~~~~~~~~~~k~i~~~~~ 409 (414)
++++++|+++|+|..++.
T Consensus 994 ~~~l~~f~~~k~v~~~~~ 1011 (1026)
T 4f9i_A 994 PDYLLHFMDPRVVTENTM 1011 (1026)
T ss_dssp TTTGGGGEEEEEEEEECC
T ss_pred HHHHHHhceEEEEEEecc
Confidence 999999999999988763
|
| >2y53_A Aldehyde dehydrogenase (BOX pathway); oxidoreductase, NADP, nucleotide-binding; HET: NAP; 1.40A {Burkholderia xenovorans LB400} PDB: 2y52_A 2y51_A 2vro_A* 2y5d_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1e-83 Score=661.42 Aligned_cols=401 Identities=23% Similarity=0.317 Sum_probs=362.6
Q ss_pred CHHHHHHHHHhHHHHHHHHHHhcCCChHHHhhchHHHHHHHHHHHHHhhhhhcCc-------ccccC-CC-cccceeecC
Q 015042 1 MWKFADLIEEHVEELAALDALDAGKVYLRAKTAEIPGAAEFLRFFAGAADKIHGE-------VLKMS-SE-LQGYTLREP 71 (414)
Q Consensus 1 L~~~a~~l~~~~~~l~~~~~~etGk~~~e~~~~ei~~~~~~l~~~a~~~~~~~~~-------~~~~~-~~-~~~~~~~~P 71 (414)
|+++++.|++|+++|++++++|+|||..++. .|+..+++.+++++.+++++.+. ..+.. .+ ...+.+++|
T Consensus 72 L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea~-~ev~~~~~~~~~~a~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~P 150 (534)
T 2y53_A 72 LADIVKLLQAKRGDYYAIATANSGTTRNDSA-VDIDGGIFTLSYYAKLGASLGEVHALRDGSAESLSKDRSFSAQHVLSP 150 (534)
T ss_dssp HHHHHHHHHHTHHHHHHHHHHHHCCCHHHHH-HHHHHHHHHHHHHHHHHHTTCSCSEEEEEEEEECSTTSSEEEEEEEEE
T ss_pred HHHHHHHHHHhHHHHHHHHHHHhCCCHHHHH-HHHHHHHHHHHHHHHHHHhccccccccCCccccCCCCCcccceEEEec
Confidence 5789999999999999999999999999865 59999999999999887665431 11211 11 135778999
Q ss_pred C-ceEEEEcCCccchHHHHHhHHHHHhhCCeEEeecCCCChHHHHHHHHHHHHcC-CCCCcEEEEeCCchhhHHHhhhCC
Q 015042 72 V-GVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLTALYYAHLAKLAG-IPDGVLNVVPGFGPTAGAAICSHM 149 (414)
Q Consensus 72 ~-Gvv~~i~p~n~P~~~~~~~~~~aLaaGN~vv~kps~~~~~~~~~l~~~l~~aG-~p~g~v~~v~~~~~~~~~~l~~~~ 149 (414)
+ |||++|+|||||+...++++++||++||+||+|||+.+|+++..+++++.++| +|+|++|++++.+.++++.| +
T Consensus 151 ~~GVv~~I~PwN~P~~~~~~~~a~ALaaGN~VVlKPs~~tp~~~~~l~~l~~~aG~lP~gvv~vv~g~~~~l~~~l---~ 227 (534)
T 2y53_A 151 TRGVALFINAFNFPSWGLWEKAAPALLSGVPVIVKPATATAWLTQRMVADVVDAGILPPGALSIICGSSAGLLDQI---R 227 (534)
T ss_dssp CSSCEEEECCTTCTTHHHHHHHHHHHHTTCCEEEECCGGGHHHHHHHHHHHHHHTCSCTTSEEECCSCCTTSGGGC---C
T ss_pred CCCEEEEECCCchHHHHHHHHHHHHHHcCCEEEEECCCcchHHHHHHHHHHHHhCCCCCCeEEEEeCChHHHHhcc---c
Confidence 7 99999999999999999999999999999999999999999999999999999 79999999998654333322 5
Q ss_pred CccEEEEeCCcHHHHHHHHHHH-hcccceeEEEcCCCCCceEcCCC-----CHHHHHHHHHHHhhccCCCCcccCceEEE
Q 015042 150 DIDYVCFTGSTDVGRLVMQAAA-ASNLKQVSLELGGKSPLLIFDDA-----DLDTAADVALLGNLYNKGEICVASSRVFV 223 (414)
Q Consensus 150 ~v~~v~~tGs~~~g~~i~~~~a-~~~~~~~~~e~gg~~~~iV~~da-----dl~~aa~~i~~~~~~~~Gq~C~a~~~i~V 223 (414)
++|+|.||||+.+|+.|++.++ .+++||+++|+|||||+||++|| |++.|++.+++++|.|+||.|++++||||
T Consensus 228 ~vd~V~FTGS~~~G~~i~~~aa~a~~~k~v~lELGGk~p~iV~~dA~~~~~Dl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV 307 (534)
T 2y53_A 228 SFDVVSFTGSADTAATLRAHPAFVQRGARLNVQADSLNSAILCADATPDTPAFDLFIKEVVREMTVKSGQKCTAIRRAFV 307 (534)
T ss_dssp TTCEEEEESCHHHHHHHHTSHHHHTTCCEEEEECCCCEEEEECTTCCTTSHHHHHHHHHHHHHHHGGGGCCTTSEEEEEE
T ss_pred ccCEEEEECCHHHHHHHHHhhhhhcCCCcEEEEcCCCCeEEECCCccccccCHHHHHHHHHHHHHhCCCCcccCCCEEEE
Confidence 7999999999999999998753 37899999999999999999999 99999999999999999999999999999
Q ss_pred eCchHHHHHHHHHHHHhhcccCCCCCCCCcccccCCHHHHHHHHHHHHHHHHcCCEEEeCCcccC------CCCceeeeE
Q 015042 224 QEGIYDKFEKKLLEKAKAWLVGDPFDPTVRQGPQISERHFDRILSYIEHGKREGATLLTGGKPIG------DKGYYIEPT 297 (414)
Q Consensus 224 ~~~i~d~f~~~l~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~------~~g~~~~Pt 297 (414)
|+++||+|+++|+++++++++|+|.++++++||+++..++++++++++++ .+|+++++||.... ..|+|++||
T Consensus 308 ~~~i~d~f~~~l~~~~~~~~vG~p~~~~~~~Gpli~~~~~~rv~~~i~~a-~~ga~~~~GG~~~~~~~~~~~~g~~~~PT 386 (534)
T 2y53_A 308 PEAALEPVLEALKAKLAKITVGNPRNDAVRMGSLVSREQYENVLAGIAAL-REEAVLAYDSSAVPLIDADANIAACVAPH 386 (534)
T ss_dssp EGGGHHHHHHHHHHHHTTCCBBCTTSTTCSBCCCSCHHHHHHHHHHHHHH-HTSSEEEEECTTSCCBSCCTTTSCCCCCE
T ss_pred eccHHHHHHHHHHHHHHhccCCCCCcCCCCccCCCCHHHHHHHHHHHHHH-HcCCEEEECCcccccccccCCCCceecCE
Confidence 99999999999999999999999999999999999999999999999999 68999999987421 368999999
Q ss_pred EEeeCCCc--ccccccceecceEEEEeeC---CH-----HHHHHHhhcCCCCceEEEecCCHHHHHHHHHhc--ceeEEE
Q 015042 298 IFTNVKED--MIIAKEEIFGPVMALMKFK---TV-----EEAIKSANNTQYGLAAGIVTKDLNVANTVSRSI--RAGIIW 365 (414)
Q Consensus 298 vl~~~~~~--~~~~~~E~fgPvl~v~~~~---~~-----~eai~~~n~~~~gl~~sv~s~d~~~~~~~~~~l--~~g~v~ 365 (414)
|+.+++++ |.+++||+||||++|++|+ |+ ||||+++|+++|||++||||+|.+.++++++++ ++|+|+
T Consensus 387 vl~~v~~~~~~~i~~eEiFGPVl~v~~~~~~~~~~~~~~deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~~~aG~V~ 466 (534)
T 2y53_A 387 LFVVNDPDNATLLHDVEVFGPVASVAPYRVTTDTNALPEAHAVALARRGQGSLVASIYSNDDAHLGRLALELADSHGRVH 466 (534)
T ss_dssp EEECSCGGGCSSTTTCCCSSSEEEEEEECCCCC---CTTHHHHHHHHTTSSEEEEEEECSCHHHHHHHHHHHTTTEEEEE
T ss_pred EEEecCccccCHHHhCCCcCCEEEEEEECCCCCcccCCHHHHHHHHhCCCCCceEEEECCCHHHHHHHHHHHHhhCCEEE
Confidence 99999987 6899999999999999999 99 999999999999999999999999999999999 899999
Q ss_pred EcCcCC---------CCCCCCcccCCCCCCCcc-chHHHHHhhheeeEEEe
Q 015042 366 INCYFG---------FSMDCPYGGYKMSGFGRE-YGLESLYKYLQIKSVVT 406 (414)
Q Consensus 366 iN~~~~---------~~~~~p~gG~~~sG~g~~-~g~~~~~~~~~~k~i~~ 406 (414)
||++.. ..+.+||||+|.||+|++ +|.+++++|+++|+|..
T Consensus 467 vN~~~~~~~~~~~~~~~~~~pfGG~k~SG~Gr~~~g~~~l~~~~~~k~v~~ 517 (534)
T 2y53_A 467 AISPSVQHSQTGHGNVMPMSLHGGPGRAGGGEELGGLRALAFYHRRSAIQA 517 (534)
T ss_dssp EECGGGTTTCCCSSCCCTTSEECCSGGGCSCCEESGGGGGGGGEEEEEEEE
T ss_pred EcCCcccccccccCCCCCCCCCCCcccCCCCCCcchHHHHHHHhhhheeec
Confidence 998642 357899999999999999 69999999999999875
|
| >3haz_A Proline dehydrogenase; proline utilization A, PUTA, flavoenzyme, 1-pyrroline-5-carboxylate dehydrogenase, oxidoreductase; HET: FAD NAD; 2.10A {Bradyrhizobium japonicum usda 110} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.7e-82 Score=682.75 Aligned_cols=401 Identities=30% Similarity=0.453 Sum_probs=374.4
Q ss_pred CHHHHHHHHHhHHHHHHHHHHhcCCChHHHhhchHHHHHHHHHHHHHhhhhhcCcc--cccCCCcccceeecCCceEEEE
Q 015042 1 MWKFADLIEEHVEELAALDALDAGKVYLRAKTAEIPGAAEFLRFFAGAADKIHGEV--LKMSSELQGYTLREPVGVVGHI 78 (414)
Q Consensus 1 L~~~a~~l~~~~~~l~~~~~~etGk~~~e~~~~ei~~~~~~l~~~a~~~~~~~~~~--~~~~~~~~~~~~~~P~Gvv~~i 78 (414)
|+++++.|++|+++|++++++|+|||..++ ..|+..+++.+++++...++..+.. .+...+...+++++|+|||++|
T Consensus 578 L~~~ad~l~~~~~eLa~~~~~E~GK~~~ea-~~Ev~~ai~~lr~~a~~a~~~~g~~~~~~~~~g~~~~~~~~P~GVV~~I 656 (1001)
T 3haz_A 578 LEQAAHLLESRSAHFIALLQREGGKTLDDA-LSELREAADFCRYYAAQGRKLFGSETAMPGPTGESNALTMRGRGVFVAI 656 (1001)
T ss_dssp HHHHHHHHHHTHHHHHHHHHHTTCCCHHHH-HHHHHHHHHHHHHHHHHHHHHHSSCEECCCCTTEEEEEEEEECSEEEEE
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCChhHH-HHHHHHHHHHHHHHHHHHHhhcCccccccCCCCCceEEEEeCCcEEEEE
Confidence 578999999999999999999999999975 5699999999999999988766543 3333566788999999999999
Q ss_pred cCCccchHHHHHhHHHHHhhCCeEEeecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhhHHHhhhCCCccEEEEeC
Q 015042 79 IPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLTALYYAHLAKLAGIPDGVLNVVPGFGPTAGAAICSHMDIDYVCFTG 158 (414)
Q Consensus 79 ~p~n~P~~~~~~~~~~aLaaGN~vv~kps~~~~~~~~~l~~~l~~aG~p~g~v~~v~~~~~~~~~~l~~~~~v~~v~~tG 158 (414)
+|||||+...++++++||++||+||+|||+.+|.++..+++++.++|+|+|++|++++++.+ ++.|+.||+||+|+|||
T Consensus 657 ~PwNfPl~i~~~~va~ALAAGNtVVlKPse~tp~ta~~l~ell~eAGlP~gvv~vV~G~g~~-g~~L~~~p~Vd~V~FTG 735 (1001)
T 3haz_A 657 SPWNFPLAIFLGQVTAALMAGNSVVAKPAEQTPRIAREAVALLHEAGIPKSALYLVTGDGRI-GAALTAHPDIAGVVFTG 735 (1001)
T ss_dssp CCSSSTTHHHHHHHHHHHHTTCEEEEECCTTCHHHHHHHHHHHHHHTCCTTTEEECCCCHHH-HHHHHHCTTCCEEEEES
T ss_pred cCCCChHHHHHHHHHHHHHcCCEEEEecchhhHHHHHHHHHHHHHhCcCcCcEEEEecCchH-HHHHHhCCCcCEEEecC
Confidence 99999999999999999999999999999999999999999999999999999999997766 99999999999999999
Q ss_pred CcHHHHHHHHHHHhc--ccceeEEEcCCCCCceEcCCCCHHHHHHHHHHHhhccCCCCcccCceEEEeCchHHHHHHHHH
Q 015042 159 STDVGRLVMQAAAAS--NLKQVSLELGGKSPLLIFDDADLDTAADVALLGNLYNKGEICVASSRVFVQEGIYDKFEKKLL 236 (414)
Q Consensus 159 s~~~g~~i~~~~a~~--~~~~~~~e~gg~~~~iV~~dadl~~aa~~i~~~~~~~~Gq~C~a~~~i~V~~~i~d~f~~~l~ 236 (414)
|+.+|+.|++.++.+ +++|+++|+|||||+||++|||++.|++.+++++|.|+||.|+++++||||++++|+|++.|+
T Consensus 736 St~vGr~I~~~aA~~~~~l~pv~lElGGknp~IV~~dADld~Aa~~iv~s~f~naGQ~C~A~~rllV~e~i~d~f~~~L~ 815 (1001)
T 3haz_A 736 STEVARSINRALAAKDGPIVPLIAETGGINAMIADATALPEQVADDVVTSAFRSAGQRCSALRLLFVQEDVADRMIEMVA 815 (1001)
T ss_dssp CHHHHHHHHHHHHHSSSCCCCEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCSTTCEEEEEEEHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHhcccCCCceEEeecCCcceEEEcCCCCHHHHHHHHHHHHHhCCCCCCCCCceeeccHHHHHHHHHHHH
Confidence 999999999988732 479999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhhcccCCCCCCCCcccccCCHHHHHHHHHHHHHHHHcCCEEEeCCcccCCCCceeeeEEEeeCCCcccccccceecc
Q 015042 237 EKAKAWLVGDPFDPTVRQGPQISERHFDRILSYIEHGKREGATLLTGGKPIGDKGYYIEPTIFTNVKEDMIIAKEEIFGP 316 (414)
Q Consensus 237 ~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgP 316 (414)
+.++++++|+|.++++++||+++..+++++.+++++++++| ++ +||... +.|+|+.|||+.+ +++.+++||+|||
T Consensus 816 ~~~~~l~vGdp~d~~t~~Gpli~~~~~~rv~~~i~~a~~~g-~v-~gg~~~-~~G~fv~PTvl~~--~~~~~~~eEiFGP 890 (1001)
T 3haz_A 816 GAARELKIGDPSDVATHVGPVIDVEAKQRLDAHIARMKTEA-RL-HFAGPA-PEGCFVAPHIFEL--TEAGQLTEEVFGP 890 (1001)
T ss_dssp HHHHTCCBSCTTSTTCSBCCCSCHHHHHHHHHHHHHHHHHS-EE-EEECCC-CSSSCCCCEEEEC--SSGGGCCSCCCSS
T ss_pred HHHHhcCCCCcccccCccCCCCCHHHHHHHHHHHHHHHhcC-eE-eccccC-CCCcEEeeEEecC--CCHHHHhccccCc
Confidence 99999999999999999999999999999999999999988 88 888754 3699999999974 6788999999999
Q ss_pred eEEEEeeCC--HHHHHHHhhcCCCCceEEEecCCHHHHHHHHHhcceeEEEEcCcCC--CCCCCCcccCCCCCCC-ccch
Q 015042 317 VMALMKFKT--VEEAIKSANNTQYGLAAGIVTKDLNVANTVSRSIRAGIIWINCYFG--FSMDCPYGGYKMSGFG-REYG 391 (414)
Q Consensus 317 vl~v~~~~~--~~eai~~~n~~~~gl~~sv~s~d~~~~~~~~~~l~~g~v~iN~~~~--~~~~~p~gG~~~sG~g-~~~g 391 (414)
|++|++|++ ++|||+++|+++|||+++|||+|.+.++++++++++|+|+||++.. ..+.+||||+|.||+| +++|
T Consensus 891 VL~V~~~~~~~ldeAI~~aN~t~yGLta~V~T~d~~~a~~~a~~l~aG~V~VN~~~~~~~~~~~PFGG~k~SG~G~~~gG 970 (1001)
T 3haz_A 891 ILHVVRYRPENLERVLRAIERTGYGLTLGVHSRIDDSIEAIIDRVQVGNIYVNRNMIGAVVGVQPFGGNGLSGTGPKAGG 970 (1001)
T ss_dssp EEEEEEECGGGHHHHHHHHHHTCCCSEEEEECSCHHHHHHHHHHCCCSEEEESSCSCCCCTTTSCBCCCGGGBCCCCBTS
T ss_pred EEEEEEeCCCCHHHHHHHHHcCCCCceEEEEcCCHHHHHHHHHhCCeeeEEEeCCCcCCCCCCCCCCCcccCcCCCCCCC
Confidence 999999996 8999999999999999999999999999999999999999999865 3467899999999999 5789
Q ss_pred HHHHHhhheeeEEEeeC
Q 015042 392 LESLYKYLQIKSVVTPI 408 (414)
Q Consensus 392 ~~~~~~~~~~k~i~~~~ 408 (414)
++++++|++.|+|+++.
T Consensus 971 ~~gl~~ft~~K~v~~~~ 987 (1001)
T 3haz_A 971 PHYLARFATEQTVTINT 987 (1001)
T ss_dssp TTSGGGGEEEEEEEEEC
T ss_pred HHHHHHhceeeEEEECC
Confidence 99999999999998875
|
| >3v4c_A Aldehyde dehydrogenase (NADP+); structural genomics, PSI-biology, nysgrc, NEW YORK structura genomics research consortium; HET: PE4; 1.91A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=100.00 E-value=4.6e-80 Score=633.53 Aligned_cols=390 Identities=24% Similarity=0.286 Sum_probs=353.4
Q ss_pred CHHHHHHHHHhHHHHHHHHHHhcCCChHHHhhchHHHHHHHHHHHHHhhhhh--cCcccc----c---CCCcccceeecC
Q 015042 1 MWKFADLIEEHVEELAALDALDAGKVYLRAKTAEIPGAAEFLRFFAGAADKI--HGEVLK----M---SSELQGYTLREP 71 (414)
Q Consensus 1 L~~~a~~l~~~~~~l~~~~~~etGk~~~e~~~~ei~~~~~~l~~~a~~~~~~--~~~~~~----~---~~~~~~~~~~~P 71 (414)
|+++++.|++|+++|++++++|+|||..++ ..|+..+++.+++++..+++. .+..+. . ..+...+.+++|
T Consensus 91 L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a-~~ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P 169 (528)
T 3v4c_A 91 LRAIADEIEARAEAITEIGSQETGLPEARL-NGERGRTTGQLRLFADHIEKGDYLDRRVDAAMPERQPAPRQEIRLVQRP 169 (528)
T ss_dssp HHHHHHHHHHTHHHHHHHHHHHHCCCHHHH-HHHHHHHHHHHHHHHHHHHHCGGGCCEEECCBTTCSSSCBCCEEEEEEE
T ss_pred HHHHHHHHHHhHHHHHHHHHHHhCCCHHHH-HHHHHHHHHHHHHHHHHHhhccccccccccccccccCCCCCcceeEeeC
Confidence 578999999999999999999999999875 469999999999999888762 222221 1 023456889999
Q ss_pred CceEEEEcCCccchHHHH--HhHHHHHhhCCeEEeecCCCChHHHHHHHHHH----HHcCCCCCcEEEEeCCchhhHHHh
Q 015042 72 VGVVGHIIPWNFPTTMFF--MKVSPALAAGCTMIVKPAEQTPLTALYYAHLA----KLAGIPDGVLNVVPGFGPTAGAAI 145 (414)
Q Consensus 72 ~Gvv~~i~p~n~P~~~~~--~~~~~aLaaGN~vv~kps~~~~~~~~~l~~~l----~~aG~p~g~v~~v~~~~~~~~~~l 145 (414)
+|||++|+|||||+...+ +++++||++||+||+|||+.+|.++..+++++ .++|+|+|++|++++.+.++++.|
T Consensus 170 ~GVv~~I~PwN~P~~~~~~~~~~a~ALaaGN~VVlKps~~tp~t~~~l~~l~~~~l~~aGlP~gvv~vv~g~~~~~g~~L 249 (528)
T 3v4c_A 170 VGPVAVFGASNFPLAFSTAGGDTAAALAAGCPVVVKGHSAHPGTGEIVAEAVDAAIRKTGVHPGVFSLIQGGSRDVGHAL 249 (528)
T ss_dssp CSCEEEECCSSSTTTTSTTSHHHHHHHHHTCCEEEECCTTCHHHHHHHHHHHHHHHHHHTCCGGGEEEECCCCHHHHHHH
T ss_pred CcEEEEECCCcchHHHhhhhhhhHHHHhcCCEEEEECCCCCcHHHHHHHHHHHHHHHhcCCCcCeEEEEeCCCHHHHHHH
Confidence 999999999999999865 89999999999999999999999999998865 578999999999999888899999
Q ss_pred hhCCCccEEEEeCCcHHHHHHHHHHHhccc--ceeEEEcCCCCCceEcCCC---CHHHHHHHHHHHhhccCCCCcccCce
Q 015042 146 CSHMDIDYVCFTGSTDVGRLVMQAAAASNL--KQVSLELGGKSPLLIFDDA---DLDTAADVALLGNLYNKGEICVASSR 220 (414)
Q Consensus 146 ~~~~~v~~v~~tGs~~~g~~i~~~~a~~~~--~~~~~e~gg~~~~iV~~da---dl~~aa~~i~~~~~~~~Gq~C~a~~~ 220 (414)
+.||+||+|+||||+.+|+.|++.++ +++ +|+++|+|||||+||++|| |++.|++.+++++|.|+||.|++++|
T Consensus 250 ~~~p~v~~V~fTGS~~~G~~i~~~aa-~~~~~~pv~lElGGk~p~iV~~dAd~~dl~~Aa~~i~~~~~~n~GQ~C~a~~r 328 (528)
T 3v4c_A 250 VQHPHIKAVGFTGSLAGGRALFDLCA-ARPEPIPFFGELGSVNPMFLLPEALKARAETLGQGWAGSLTMGAGQFCTNPGI 328 (528)
T ss_dssp HHCTTCCEEEEESCHHHHHHHHHHHH-HSSSCCCEEEECCCCCCEEECHHHHHHHHHHHHHHHHHHHHGGGGCCTTCCCE
T ss_pred HhCCCCCEEEEECChHHHHHHHHHHh-hccCCCceEEecCCCCeEEECCCCChhhHHHHHHHHHHHHHhcCCCccccCcE
Confidence 99999999999999999999999988 788 8999999999999999999 88999999999999999999999999
Q ss_pred EEEeCc-hHHHHHHHHHHHHhhcccCCCCCCCCcccccCCHHHHHHHHHHHHHHHHcCCEEEeCCcccCCCCceeeeEEE
Q 015042 221 VFVQEG-IYDKFEKKLLEKAKAWLVGDPFDPTVRQGPQISERHFDRILSYIEHGKREGATLLTGGKPIGDKGYYIEPTIF 299 (414)
Q Consensus 221 i~V~~~-i~d~f~~~l~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~~~g~~~~Ptvl 299 (414)
||||++ +||+|+++|++++++++.| +.+||+++..+.+++.++++ ++|+++++||.. .|+|++|||+
T Consensus 329 vlV~~~~i~d~f~~~l~~~~~~~~~~------~~~gp~~~~~~~~~v~~~~~---~~Ga~v~~gG~~---~g~~~~PTvl 396 (528)
T 3v4c_A 329 AVVIEGADADRFTTAAVEALAKVAPQ------TMLTDGIAKAYRDGQARFAT---RNAVKPLLATES---SGRDASPNLF 396 (528)
T ss_dssp EEEESSHHHHHHHHHHHHHHHTCCCE------ECSCHHHHHHHHHHHHHHHT---CTTCEEEECCCC---CTTEECCEEE
T ss_pred EEEecccHHHHHHHHHHHHHHhcccC------CCCCHHHHHHHHHHHHHHHH---hCCCEEEeCCCc---CCceeccEEE
Confidence 999997 9999999999999988643 57899998888877777653 479999999975 7999999999
Q ss_pred eeCCCc---ccccccceecceEEEEeeCCHHHHHHHhhcCCCCceEEEecC--CHHHHHHHHHhcc--eeEEEEcCcCC-
Q 015042 300 TNVKED---MIIAKEEIFGPVMALMKFKTVEEAIKSANNTQYGLAAGIVTK--DLNVANTVSRSIR--AGIIWINCYFG- 371 (414)
Q Consensus 300 ~~~~~~---~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~sv~s~--d~~~~~~~~~~l~--~g~v~iN~~~~- 371 (414)
.+++++ |.+++||+||||++|++|+|+||||+++|+++|||++||||+ |.+++++++++++ +|+|+||+++.
T Consensus 397 ~~~~~~~~~~~i~~eEiFGPVl~V~~~~~~deAi~~aN~~~~GL~a~v~t~d~d~~~a~~~a~~l~~~aG~V~vN~~~~~ 476 (528)
T 3v4c_A 397 ETTGAQFLADHALGEEVFGPLGLVVRVGSPAEMEELARGFQGQLTATIHMDAGDLETARRLRPVLERKAGRVLVNGFPTG 476 (528)
T ss_dssp EEEHHHHHHCGGGGCCCSSSEEEEEEESSHHHHHHHHHHCCCEEEEEEECCGGGHHHHHHHHHHHHHHEEEEEESSCTTC
T ss_pred EecCcccccChhhcccccCCeEEEEecCCHHHHHHHHhcCCCCceEEEEcCCCCHHHHHHHHHHHhhcCcEEEEcCCCCC
Confidence 988887 899999999999999999999999999999999999999999 8999999999998 99999999754
Q ss_pred --CCCCCCccc-CCCCCCCccc--hHHHHHhhheeeEE
Q 015042 372 --FSMDCPYGG-YKMSGFGREY--GLESLYKYLQIKSV 404 (414)
Q Consensus 372 --~~~~~p~gG-~~~sG~g~~~--g~~~~~~~~~~k~i 404 (414)
..+.+|||| +|.||+|+++ |++|+++|+++|++
T Consensus 477 ~~~~~~~pfGG~~~~Sg~gr~~~~G~~gl~~~~~~k~~ 514 (528)
T 3v4c_A 477 VEVVDSMVHGGPYPASTNFGATSVGTMSIRRFLRPVAY 514 (528)
T ss_dssp CCCSTTCCCCCTTTTBSCTTCCSSSGGGGGGGEEEEEE
T ss_pred CccCCCCCCCCCCCCCCCCCCCCCcHHHHHHhchhHHh
Confidence 357899999 9999999975 99999999999975
|
| >1ez0_A ALDH, aldehyde dehydrogenase; nucleotide binding domain, NADP+, oxidoreductase; HET: NAP; 2.10A {Vibrio harveyi} SCOP: c.82.1.1 PDB: 1eyy_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-79 Score=627.45 Aligned_cols=389 Identities=22% Similarity=0.271 Sum_probs=352.2
Q ss_pred CHHHHHHHHHhHHHHHHHHHHhcCCChHHHhhchHHHHHHHHHHHHHhhhh--hcCcccc----c--CCC-cccceeecC
Q 015042 1 MWKFADLIEEHVEELAALDALDAGKVYLRAKTAEIPGAAEFLRFFAGAADK--IHGEVLK----M--SSE-LQGYTLREP 71 (414)
Q Consensus 1 L~~~a~~l~~~~~~l~~~~~~etGk~~~e~~~~ei~~~~~~l~~~a~~~~~--~~~~~~~----~--~~~-~~~~~~~~P 71 (414)
|+++++.|++|+++|++++++|+|||..++ ..|+..+++.+++++..+++ ..+..+. . ..+ ...+.+++|
T Consensus 58 L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a-~~Ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P 136 (510)
T 1ez0_A 58 LRTIASELEARSDDIIARAHLETALPEVRL-TGEIARTANQLRLFADVVNSGSYHQAILDTPNPTRAPLPKPDIRRQQIA 136 (510)
T ss_dssp HHHHHHHHHHTHHHHHHHHHHHHCCCHHHH-HHHHHHHHHHHHHHHHHHHHTGGGCEEEECCBTTCSSSCBCCEEEEEEE
T ss_pred HHHHHHHHHHhHHHHHHHHHHHhCCCHHHH-HHHHHHHHHHHHHHHHHHHhCccccccccccccccCCCCCCCceEEEec
Confidence 578999999999999999999999999865 56999999999999988765 3332221 1 111 135789999
Q ss_pred CceEEEEcCCccchHHH--HHhHHHHHhhCCeEEeecCCCChHHHHHHHHHH----HHcCCCCCcEEEEeCCchhhHHHh
Q 015042 72 VGVVGHIIPWNFPTTMF--FMKVSPALAAGCTMIVKPAEQTPLTALYYAHLA----KLAGIPDGVLNVVPGFGPTAGAAI 145 (414)
Q Consensus 72 ~Gvv~~i~p~n~P~~~~--~~~~~~aLaaGN~vv~kps~~~~~~~~~l~~~l----~~aG~p~g~v~~v~~~~~~~~~~l 145 (414)
+|||++|+|||||+... .+++++||++||+||+|||+.+|+++..+++++ .++|+|+|++|++++.+.++++.|
T Consensus 137 ~GVv~~I~PwN~P~~~~~~~~~~~~ALaaGN~VVlKps~~tp~t~~~l~~l~~~al~~aGlP~gvv~vv~g~~~~~g~~L 216 (510)
T 1ez0_A 137 LGPVAVFGASNFPLAFSAAGGDTASALAAGCPVIVKGHTAHPGTSQIVAECIEQALKQEQLPQAIFTLLQGNQRALGQAL 216 (510)
T ss_dssp CSCEEEECCSSCTTTTSTTSHHHHHHHHHTCCEEEECCTTCHHHHHHHHHHHHHHHHHHTCCGGGEEEECCSCTHHHHHH
T ss_pred CcEEEEECCccchhhhhhhHHHHHHHHHcCCEEEEECCCCchHHHHHHHHHHHHHHHHhCCCCCeEEEEeCCcHHHHHHH
Confidence 99999999999999985 499999999999999999999999999999987 568999999999999777889999
Q ss_pred hhCCCccEEEEeCCcHHHHHHHHHHHhccc--ceeEEEcCCCCCceEcCCCCHH--HHHHHHHHHhhccCCCCcccCceE
Q 015042 146 CSHMDIDYVCFTGSTDVGRLVMQAAAASNL--KQVSLELGGKSPLLIFDDADLD--TAADVALLGNLYNKGEICVASSRV 221 (414)
Q Consensus 146 ~~~~~v~~v~~tGs~~~g~~i~~~~a~~~~--~~~~~e~gg~~~~iV~~dadl~--~aa~~i~~~~~~~~Gq~C~a~~~i 221 (414)
+.||+||+|.||||+.+|+.|++.++ +++ +|+++|+|||||+||++|||++ .|++.+++++|.|+||.|++++||
T Consensus 217 ~~~p~v~~I~FTGS~~~G~~i~~~aa-~~l~~~pv~lELGGk~p~iV~~dADl~~~~aa~~i~~~~~~n~GQ~C~a~~rv 295 (510)
T 1ez0_A 217 VSHPEIKAVGFTGSVGGGRALFNLAH-ERPEPIPFYGELGAINPTFIFPSAMRAKADLADQFVASMTMGCGQFCTKPGVV 295 (510)
T ss_dssp HHCTTCCEEEEESCHHHHHHHHHHHH-HSSSCCCEEEECCCCCEEEECHHHHHHCTTHHHHHHHHHTGGGGCCTTCCCEE
T ss_pred HcCCCCCEEEEeCcHHHHHHHHHHhh-ccCCCccEEEECCCCCeEEEeCCCCccHHHHHHHHHHHHHcCCCCCcCCCCEE
Confidence 99999999999999999999999988 665 9999999999999999999999 999999999999999999999999
Q ss_pred EEeCc-hHHHHHHHHHHHHhhcccCCCCCCCCcccccCCHHHHHHHHHHHHHHHH-cCCEEEeCCcccCCCCceeeeEEE
Q 015042 222 FVQEG-IYDKFEKKLLEKAKAWLVGDPFDPTVRQGPQISERHFDRILSYIEHGKR-EGATLLTGGKPIGDKGYYIEPTIF 299 (414)
Q Consensus 222 ~V~~~-i~d~f~~~l~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~-~ga~v~~gg~~~~~~g~~~~Ptvl 299 (414)
|||++ ++|+|+++|++.++++++ ||++++.+.+++.++++++++ +|+++++||. .|+|++|||+
T Consensus 296 lV~~~~i~d~f~~~l~~~~~~~~~----------gp~~~~~~~~~~~~~v~~~~~~~Ga~~~~gg~----~g~~~~Ptvl 361 (510)
T 1ez0_A 296 FALNTPETQAFIETAQSLIRQQSP----------STLLTPGIRDSYQSQVVSRGSDDGIDVTFSQA----ESPCVASALF 361 (510)
T ss_dssp EEESSHHHHHHHHHHHHHHHHCCC----------BCCSSHHHHHHHHHHHHHHHTSTTEEEEECCC----CTTSBCCEEE
T ss_pred EEeCCccHHHHHHHHHHHHHhcCC----------CCCCCHHHHHHHHHHHHHHHhcCCCEEEecCC----CCCEecCEEE
Confidence 99999 999999999999998863 588888899999999999984 7999999996 2899999999
Q ss_pred eeCCCc---ccccccceecceEEEEeeCCHHHHHHHhhcCCCCceEEEecCCH--HHHHHHHHhc--ceeEEEEcCcCC-
Q 015042 300 TNVKED---MIIAKEEIFGPVMALMKFKTVEEAIKSANNTQYGLAAGIVTKDL--NVANTVSRSI--RAGIIWINCYFG- 371 (414)
Q Consensus 300 ~~~~~~---~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~sv~s~d~--~~~~~~~~~l--~~g~v~iN~~~~- 371 (414)
.+++++ |.+++||+||||++|++|+|+||||+++|+++|||++||||+|. +.++++++++ ++|+|+||++..
T Consensus 362 ~~~~~~~~~~~i~~eEiFGPVl~v~~~~~~deai~~aN~~~~gLaa~v~t~d~~~~~a~~~~~~l~~~aG~V~iN~~~~~ 441 (510)
T 1ez0_A 362 VTSSENWRKHPAWEEEIFGPQSLIVVCENVADMLSLSEMLAGSLTATIHATEEDYPQVSQLIPRLEEIAGRLVFNGWPTG 441 (510)
T ss_dssp EEEHHHHHHCGGGGSCCCSSEEEEEEESSHHHHHHHHHTCCCEEEEEEECCGGGHHHHHHHHHHHHTTEEEEEESSCSSC
T ss_pred EecCCccccCHHHcCCccCCeEEEEEeCCHHHHHHHHhcCCCCeEEEEEccCcCHHHHHHHHHHHhhcccEEEECCCCcc
Confidence 988777 99999999999999999999999999999999999999999987 7999999999 799999999765
Q ss_pred --CCCCCCccc-CCCCCCCc--cchHHHHHhhheeeEEE
Q 015042 372 --FSMDCPYGG-YKMSGFGR--EYGLESLYKYLQIKSVV 405 (414)
Q Consensus 372 --~~~~~p~gG-~~~sG~g~--~~g~~~~~~~~~~k~i~ 405 (414)
..+.+|||| +|.||.|+ .+|.+|+++|+++|++.
T Consensus 442 ~~~~~~~pfGG~~~~sG~g~~~~~G~~gl~~~~~~k~~~ 480 (510)
T 1ez0_A 442 VEVGYAMVHGGPYPASTHSASTSVGAEAIHRWLRPVAYQ 480 (510)
T ss_dssp CCCSSSCCCCCSTTSCSCSSCCSSSGGGGGGGEEEEEEE
T ss_pred CccCCCCCCCCCCCCcCCCCCCCccHHHHHHhheEEEEc
Confidence 457899999 79999985 47999999999998764
|
| >3k9d_A LMO1179 protein, aldehyde dehydrogenase; structural genomics, PSI-2, protein initiative; 2.00A {Listeria monocytogenes} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.4e-75 Score=590.04 Aligned_cols=385 Identities=19% Similarity=0.220 Sum_probs=339.3
Q ss_pred CHHHHHHHHHhHHHHHHHHHHhcCCChHHHhhchHHHHHHHHHHHHHhhhhhcCcccccCCCcccceeecCCceEEEEcC
Q 015042 1 MWKFADLIEEHVEELAALDALDAGKVYLRAKTAEIPGAAEFLRFFAGAADKIHGEVLKMSSELQGYTLREPVGVVGHIIP 80 (414)
Q Consensus 1 L~~~a~~l~~~~~~l~~~~~~etGk~~~e~~~~ei~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p 80 (414)
|+++++.|++|+++|++++++|+||+..++...+...+++.+..+....+ ..+ .+..+.+...+.+++|+|||++|+|
T Consensus 40 L~~~a~~l~~~~~ela~~~~~e~Gk~~~e~~~~~~~~~~~~~~~~~~~~~-~~g-~~~~~~~~~~~~~~~P~GVv~~I~P 117 (464)
T 3k9d_A 40 VKAIADAGYGAREKLAKMAHEETGFGIWQDKVIKNVFASKHVYNYIKDMK-TIG-MLKEDNEKKVMEVAVPLGVVAGLIP 117 (464)
T ss_dssp HHHHHHHHHHTHHHHHHHHHHHHCCSCHHHHHHHHHHHHHHHHHHHTTCC-CSE-EEEEETTTTEEEEEEECCEEEEEEC
T ss_pred HHHHHHHHHHhHHHHHHHHHHHhCcCHHHHHHHHHHHHHHHHHHhhhccc-ccc-eeccCCCceeEEEEecceEEEEECC
Confidence 57899999999999999999999999987654455555544443332211 111 2222345678889999999999999
Q ss_pred CccchHHHHHhHHHHHhhCCeEEeecCCCChHHHHHHH----HHHHHcCCCCCcEEEEeCCchhhHHHhhhCCCccEEEE
Q 015042 81 WNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLTALYYA----HLAKLAGIPDGVLNVVPGFGPTAGAAICSHMDIDYVCF 156 (414)
Q Consensus 81 ~n~P~~~~~~~~~~aLaaGN~vv~kps~~~~~~~~~l~----~~l~~aG~p~g~v~~v~~~~~~~~~~l~~~~~v~~v~~ 156 (414)
||||+...++++++||++||+||+|||+.+|.++..++ +++.++|+|+|+++++++++.+.++.|+.||+||+|+|
T Consensus 118 ~N~P~~~~~~~~~~ALaaGN~VVlKps~~ap~t~~~l~~ll~~~~~~aG~P~gvv~vv~g~~~~~~~~L~~~~~vd~I~f 197 (464)
T 3k9d_A 118 STNPTSTVIYKTLISIKAGNSIVFSPHPNALKAILETVRIISEAAEKAGCPKGAISCMTVPTIQGTDQLMKHKDTAVILA 197 (464)
T ss_dssp SSSHHHHHHHHHHHHHHTTCEEEEEECGGGHHHHHHHHHHHHHHHHHTTCCTTSEEECSSCCHHHHHHHHHCTTEEEEEE
T ss_pred CcChHHHHHHHHHHHHHhCCeEEEECCcchHHHHHHHHHHHHHHHHHhCCCCCeEEEEeCCCHHHHHHHHhCCCCCEEEE
Confidence 99999999999999999999999999999999998765 45789999999999999988889999999999999999
Q ss_pred eCCcHHHHHHHHHHHhcccceeEEEcC-CCCCceEcCCCCHHHHHHHHHHHhhccCCCCcccCceEEEeCchHHHHHHHH
Q 015042 157 TGSTDVGRLVMQAAAASNLKQVSLELG-GKSPLLIFDDADLDTAADVALLGNLYNKGEICVASSRVFVQEGIYDKFEKKL 235 (414)
Q Consensus 157 tGs~~~g~~i~~~~a~~~~~~~~~e~g-g~~~~iV~~dadl~~aa~~i~~~~~~~~Gq~C~a~~~i~V~~~i~d~f~~~l 235 (414)
|||+.+ .+.++ ++++|+ +|+| ||+|+||++|||++.|++.+++++|+|+||.|+++++||||+++||+|+++|
T Consensus 198 TGs~~v----~~~a~-~~~kpv-lelG~G~~p~iV~~dADl~~Aa~~i~~~~~~n~Gq~C~a~~rvlV~~~i~d~f~~~l 271 (464)
T 3k9d_A 198 TGGSAM----VKAAY-SSGTPA-IGVGPGNGPAFIERSANIPRAVKHILDSKTFDNGTICASEQSVVVERVNKEAVIAEF 271 (464)
T ss_dssp CSCHHH----HHHHT-TSSSCE-EEBCCCCCEEEECTTSCHHHHHHHHHHHHTGGGGCSTTSCCEEEEEHHHHHHHHHHH
T ss_pred eCChHH----HHHHH-hcCCcE-EeeCCCCCeEEECCCCCHHHHHHHHHHHHhcCCCCCCCCCcEEEEeHHHHHHHHHHH
Confidence 999984 44454 788999 7887 9999999999999999999999999999999999999999999999999999
Q ss_pred HHHH-------hhcccCCCC-CCCCcccccCCHHHHHHHHHHHHHHHHcCCEEEeCCcccCCCCceeeeEEEeeCCCccc
Q 015042 236 LEKA-------KAWLVGDPF-DPTVRQGPQISERHFDRILSYIEHGKREGATLLTGGKPIGDKGYYIEPTIFTNVKEDMI 307 (414)
Q Consensus 236 ~~~~-------~~~~~g~~~-~~~~~~gpl~~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~ 307 (414)
+++. +.+++|+|. ++++++||+++.++++++.++++.++.+|+++++||.. +++++++
T Consensus 272 ~~~~~~~~~~~~~~~~g~~~~~~~~~~gp~i~~~~~~~i~~~~~~a~~~ga~vl~gg~~--------------~v~~~~~ 337 (464)
T 3k9d_A 272 RKQGAHFLSDAEAVQLGKFILRPNGSMNPAIVGKSVQHIANLAGLTVPADARVLIAEET--------------KVGAKIP 337 (464)
T ss_dssp HHTTEEECCHHHHHHHHHHHBCTTSCBCGGGTTCCHHHHHHHTTCCCCTTCCEEEEECC--------------CCSTTCG
T ss_pred HHhhhhhcChhhhhhhcccccCCCCccCcccCHHHHHHHHHHhhhhhcCCCEEEEcCCC--------------CCCCCCc
Confidence 9885 456788887 77889999999999999999999999999999999864 4567787
Q ss_pred ccccceecceEEEEeeCCHHHHH----HHhhcCCCCceEEEecCCHHHHHHHHHhcceeEEEEcCcCC---------CCC
Q 015042 308 IAKEEIFGPVMALMKFKTVEEAI----KSANNTQYGLAAGIVTKDLNVANTVSRSIRAGIIWINCYFG---------FSM 374 (414)
Q Consensus 308 ~~~~E~fgPvl~v~~~~~~~eai----~~~n~~~~gl~~sv~s~d~~~~~~~~~~l~~g~v~iN~~~~---------~~~ 374 (414)
+. +|+||||++|++|+|+|||| +++|+++|||+++|||+|.+.++++++++++|+|+||++.. ..+
T Consensus 338 ~~-~E~fgPVl~v~~~~~~~eAi~~ai~~~n~~~~gl~a~i~t~d~~~a~~~~~~l~~G~v~vN~~~~~~~~g~~~~~~~ 416 (464)
T 3k9d_A 338 YS-REKLAPILAFYTAETWQEACELSMDILYHEGAGHTLIIHSEDKEIIREFALKKPVSRLLVNTPGALGGIGATTNLVP 416 (464)
T ss_dssp GG-SCCCSSEEEEEEESSHHHHHHHHHHHHHHTTTEEEEEEECSCHHHHHHHHHHSSEEEEEESSCHHHHHTTSSSSSCC
T ss_pred cc-ccccCceEEEEEeCCHHHHHHHHHHHHhcCCCCCeEEEEeCCHHHHHHHHHhCCEeEEEEECCccccccccCCCCCc
Confidence 65 79999999999999999997 79999999999999999999999999999999999999864 468
Q ss_pred CCCcccCCCCCCCccchHHHHHhhheeeEEEeeCC
Q 015042 375 DCPYGGYKMSGFGREYGLESLYKYLQIKSVVTPIY 409 (414)
Q Consensus 375 ~~p~gG~~~sG~g~~~g~~~~~~~~~~k~i~~~~~ 409 (414)
.+|||| +.+|.|+++|+.|+++|++.|+|.+..+
T Consensus 417 ~~~~G~-G~~G~g~~~~~~~~~~~~~~k~v~~~~~ 450 (464)
T 3k9d_A 417 ALTLGC-GAVGGSSSSDNIGPENLFNIRRIATGVL 450 (464)
T ss_dssp CSCBBC-TGGGTCSCCSBCCGGGSEEEEEEEECCC
T ss_pred cccccC-cCCCCCcCCCCCCHHHheEEEEEEecCC
Confidence 899998 7899999999999999999999988765
|
| >1vlu_A Gamma-glutamyl phosphate reductase; YOR323C, structural GENO JCSG, protein structure initiative, PSI, joint center for S genomics; 2.29A {Saccharomyces cerevisiae} SCOP: c.82.1.1 | Back alignment and structure |
|---|
Probab=100.00 E-value=5.7e-76 Score=593.51 Aligned_cols=368 Identities=16% Similarity=0.164 Sum_probs=297.6
Q ss_pred CHHHHHHHHHhHHHHHHHHHHhcCCCh----HHHhhchHHH-HHHHHHHHHHhhhhhc------CcccccC---CCcccc
Q 015042 1 MWKFADLIEEHVEELAALDALDAGKVY----LRAKTAEIPG-AAEFLRFFAGAADKIH------GEVLKMS---SELQGY 66 (414)
Q Consensus 1 L~~~a~~l~~~~~~l~~~~~~etGk~~----~e~~~~ei~~-~~~~l~~~a~~~~~~~------~~~~~~~---~~~~~~ 66 (414)
|+++++.|++|+++|++++++|+|||. .++...|+.. +++.+++++...++.. +...+.. .+...+
T Consensus 42 L~~~a~~l~~~~~ela~~~~~e~Gk~~~~g~~ea~~~ev~~~~~~~~~~~a~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ 121 (468)
T 1vlu_A 42 LYKIHDALKANAHAIEEANKIDLAVAKETGLADSLLKRLDLFKGDKFEVMLQGIKDVAELEDPVGKVKMARELDDGLTLY 121 (468)
T ss_dssp HHHHHHHHHHTHHHHHHHHHHHHHHHHHSSCCHHHHHHHCTTSTTHHHHHHHHHHHHHHSCCSSSCEEEEEEEETTEEEE
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCcccccccchHHHHHHhhhhHHHHHHHHHHHHHHhhcCCCCCeecccccCCCCceeE
Confidence 578999999999999999999999998 6654468888 8888998888776654 3333311 244568
Q ss_pred eeecCCceEEEEcCCccchHHHHHhHHHHHhhCCeEEeecCCCChHHHHHHHHHHH----H----cCCCCCcEEEEeCCc
Q 015042 67 TLREPVGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLTALYYAHLAK----L----AGIPDGVLNVVPGFG 138 (414)
Q Consensus 67 ~~~~P~Gvv~~i~p~n~P~~~~~~~~~~aLaaGN~vv~kps~~~~~~~~~l~~~l~----~----aG~p~g~v~~v~~~~ 138 (414)
.+++|+|||++|+||| | ...++++++||++||+||+|||+.+|+++..+++++. + +|+|+|++|+++ .+
T Consensus 122 ~~~~P~GVV~~I~pwN-P-~~~~~~~~~ALaaGN~VVlKps~~tp~t~~~l~~l~~~aL~e~~~~aGlP~gvv~vv~-~~ 198 (468)
T 1vlu_A 122 QVTAPVGVLLVIFESR-P-EVIANITALSIKSGNAAILKGGKESVNTFREMAKIVNDTIAQFQSETGVPVGSVQLIE-TR 198 (468)
T ss_dssp EEEEECCEEEEEESSC-T-HHHHHHHHHHHHHTCEEEEECCGGGHHHHHHHHHHHHHHHHHHHHHHCCCTTSEEECC-CC
T ss_pred EEecCcceEEEEeccC-h-HHHHHHHHHHHHcCCEEEEEcCCccHHHHHHHHHHHHHHHHhhchhcCCCCCcEEEEC-CH
Confidence 8999999999999999 9 9999999999999999999999999999999999995 8 999999999999 66
Q ss_pred hhhHHHhhhCCCccEEEEeCCcHHHHHHHHHHHhcccceeEEEcCCCCCceEcCCCCHHHHHHHHHHHhhccCCCCcccC
Q 015042 139 PTAGAAICSHMDIDYVCFTGSTDVGRLVMQAAAASNLKQVSLELGGKSPLLIFDDADLDTAADVALLGNLYNKGEICVAS 218 (414)
Q Consensus 139 ~~~~~~l~~~~~v~~v~~tGs~~~g~~i~~~~a~~~~~~~~~e~gg~~~~iV~~dadl~~aa~~i~~~~~~~~Gq~C~a~ 218 (414)
.++++.|..||+||+|+||||+.+|+.|++.+ ++|+++|+|||||+||++|||++.|++.+++++|.|+| .|+++
T Consensus 199 ~~~g~~L~~~p~vd~I~fTGS~~~g~~i~~~a----~kpv~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~G-~C~a~ 273 (468)
T 1vlu_A 199 QDVSDLLDQDEYIDLVVPRGSNALVRKIKDTT----KIPVLGHADGICSIYLDEDADLIKAKRISLDAKTNYPA-GCNAM 273 (468)
T ss_dssp --CGGGGGCTTTCCEEEEESCHHHHHHHHHTC----CSCBTTBCSCCEEEEECTTCCHHHHHHHHHHTTCC-----CCCC
T ss_pred HHHHHHHhhCCCcCEEEEECCHHHHHHHHHhc----CCCEEeecCCccceEECCCCCHHHHHHHHHHHhcCCCC-cCCcC
Confidence 67899999999999999999999999998764 69999999999999999999999999999999999999 99999
Q ss_pred ceEEEeCchHHHHHHHHHHHHhhccc---CCCCCCCCcccccCCHHHHHHHHHH-HHHHHHcCCEEEeCCcccCCCCcee
Q 015042 219 SRVFVQEGIYDKFEKKLLEKAKAWLV---GDPFDPTVRQGPQISERHFDRILSY-IEHGKREGATLLTGGKPIGDKGYYI 294 (414)
Q Consensus 219 ~~i~V~~~i~d~f~~~l~~~~~~~~~---g~~~~~~~~~gpl~~~~~~~~~~~~-i~~a~~~ga~v~~gg~~~~~~g~~~ 294 (414)
+|||||+++ |+|+++|++.++++++ |+|.+ +++ +++++ ++++||. | +
T Consensus 274 ~rvlV~~~i-d~f~~~l~~~~~~~~v~~~Gdp~~-----------------~~~~i~~a~----~~~~gG~-----g--~ 324 (468)
T 1vlu_A 274 ETLLINPKF-SKWWEVLENLTLEGGVTIHATKDL-----------------KTAYFDKLN----ELGKLTE-----A--I 324 (468)
T ss_dssp EEEEECTTS-TTHHHHHHHHHHHHCCCBEECHHH-----------------HHHHHHHHH----HHTCCCH-----H--H
T ss_pred cEEEEECCH-HHHHHHHHHHHHhcCCeecCCHHH-----------------hcccccccc----eeeccCC-----C--C
Confidence 999999999 9999999999999987 76532 344 55554 3667775 4 7
Q ss_pred eeEEEeeCCCcccccccceecceEEEEeeCCHHHHHHHhhcCCCCceEEEecCCHHHHHHHHHhcceeEEEEcCcCCCCC
Q 015042 295 EPTIFTNVKEDMIIAKEEIFGPVMALMKFKTVEEAIKSANNTQYGLAAGIVTKDLNVANTVSRSIRAGIIWINCYFGFSM 374 (414)
Q Consensus 295 ~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~sv~s~d~~~~~~~~~~l~~g~v~iN~~~~~~~ 374 (414)
.||++ ++++|.+++||+||||++|++|+|+||||+++|+++|||+++|||+|.+.++++++++++|+|+||++....+
T Consensus 325 ~Ptvl--v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~V~vN~~~~~~~ 402 (468)
T 1vlu_A 325 QCKTV--DADEEQDFDKEFLSLDLAAKFVTSTESAIQHINTHSSRHTDAIVTENKANAEKFMKGVDSSGVYWNASTRFAD 402 (468)
T ss_dssp HTTBC---------------CCCCEEEECCSHHHHHHHHTTSCSSCEEEEECSCHHHHHHHHHHCCCSEEEESSCGGGCC
T ss_pred CCcee--eCCCchhhhcCccCceEEEEEeCCHHHHHHHHHhCCCCceEEEEeCCHHHHHHHHHhCCeeEEEEcCCCCCCC
Confidence 89997 7889999999999999999999999999999999999999999999999999999999999999999877778
Q ss_pred CCCcc-----cCCCCCCCccchHHHHHhhheeeEEEeeC
Q 015042 375 DCPYG-----GYKMSGFGREYGLESLYKYLQIKSVVTPI 408 (414)
Q Consensus 375 ~~p~g-----G~~~sG~g~~~g~~~~~~~~~~k~i~~~~ 408 (414)
.+||| |+|.||+|++ |++|+++|+++|+|+.+.
T Consensus 403 ~~pfG~Gg~~G~~~SG~g~~-G~~gl~~f~~~K~v~~~~ 440 (468)
T 1vlu_A 403 GFRYGFGAEVGISTSKIHAR-GPVGLDGLVSYQYQIRGD 440 (468)
T ss_dssp -----------------------CCSGGGEEEEEEEECS
T ss_pred CCCCCCCCCcceecCCCCCC-cchHHHHhcceEEEEECC
Confidence 89999 9999999999 999999999999998764
|
| >2h5g_A Delta 1-pyrroline-5-carboxylate synthetase; dehydrogenase, structural genomics, structural genomics CONS SGC, oxidoreductase; 2.25A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-73 Score=576.03 Aligned_cols=359 Identities=18% Similarity=0.182 Sum_probs=308.1
Q ss_pred CHHHHHHHHHhHHHHHHHHHHhc-------CCChHH---HhhchHHHHHHHHHHHHHhhhhhcCcccccC---CCcccce
Q 015042 1 MWKFADLIEEHVEELAALDALDA-------GKVYLR---AKTAEIPGAAEFLRFFAGAADKIHGEVLKMS---SELQGYT 67 (414)
Q Consensus 1 L~~~a~~l~~~~~~l~~~~~~et-------Gk~~~e---~~~~ei~~~~~~l~~~a~~~~~~~~~~~~~~---~~~~~~~ 67 (414)
|+++++.|++|+++|++++++|+ |||..+ ....|+..+++.+++++.++++..+...+.. .+...++
T Consensus 57 L~~~a~~l~~~~~ela~~~~~e~g~~~~~~Gk~~~~rl~~a~~ev~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~ 136 (463)
T 2h5g_A 57 IHHLADLLTDQRDEILLANKKDLEEAEGRLAAPLLKRLSLSTSKLNSLAIGLRQIAASSQDSVGRVLRRTRIAKNLELEQ 136 (463)
T ss_dssp HHHHHHHHHHTHHHHHHHHHHHHHHHTTTSCHHHHHTTCCCHHHHHHHHHHHHHHHHHCTTSTTCEEEEEEEETTEEEEE
T ss_pred HHHHHHHHHHhHHHHHHHHHHHhhcccccCCCchhhhhhhhHHHHHHHHHHHHHHHHhhHhhcCcccccccCCCCceeEE
Confidence 57899999999999999999999 699873 1246999999999999988777666543321 2445688
Q ss_pred eecCCceEEEEcCCccchHHHHHhHHHHHhhCCeEEeecCCCChHHHHHHHHHHHHc----CCCCCcEEEEeCCchhhHH
Q 015042 68 LREPVGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLTALYYAHLAKLA----GIPDGVLNVVPGFGPTAGA 143 (414)
Q Consensus 68 ~~~P~Gvv~~i~p~n~P~~~~~~~~~~aLaaGN~vv~kps~~~~~~~~~l~~~l~~a----G~p~g~v~~v~~~~~~~~~ 143 (414)
+++|+|||++|+||| |...+ +++++||++||+||+|||+.+|+++..+++++.++ | |+|++|++++ +.++++
T Consensus 137 ~~~P~GVv~~I~p~n-P~n~p-~~~a~ALaaGN~VVlKps~~tp~t~~~l~~l~~~al~~~G-P~gvv~vv~g-~~~~g~ 212 (463)
T 2h5g_A 137 VTVPIGVLLVIFESR-PDCLP-QVAALAIASGNGLLLKGGKEAAHSNRILHLLTQEALSIHG-VKEAVQLVNT-REEVED 212 (463)
T ss_dssp EEEECCEEEEEESSC-TTHHH-HHHHHHHHHTCEEEEECCGGGHHHHHHHHHHHHHHHHTTT-CGGGEEECCT-TCCC--
T ss_pred EEEcCceEEEEecCC-cHHHH-HHHHHHHHcCCEEEEECCCCcHHHHHHHHHHHHHHHHhcC-CCCeEEEEcC-CHHHHH
Confidence 999999999999887 77777 89999999999999999999999999999999999 9 9999999999 777899
Q ss_pred HhhhCCCccEEEEeCCcHHHHHHHHHHHhcccceeEEEcCCCCCceEcCCCCHHHHHHHHHHHhhccCCCCcccCceEEE
Q 015042 144 AICSHMDIDYVCFTGSTDVGRLVMQAAAASNLKQVSLELGGKSPLLIFDDADLDTAADVALLGNLYNKGEICVASSRVFV 223 (414)
Q Consensus 144 ~l~~~~~v~~v~~tGs~~~g~~i~~~~a~~~~~~~~~e~gg~~~~iV~~dadl~~aa~~i~~~~~~~~Gq~C~a~~~i~V 223 (414)
.|+.||+||+|+||||+.+|+.|++.++ ++|+++|+|||||+||++|||++.|++.+++++|.| ||.|++++||||
T Consensus 213 ~L~~~p~vd~I~FTGS~~~G~~i~~~aa---l~pv~lElGGk~p~iV~~dADl~~Aa~~i~~~~f~n-GQ~C~a~~rvlV 288 (463)
T 2h5g_A 213 LCRLDKMIDLIIPRGSSQLVRDIQKAAK---GIPVMGHSEGICHMYVDSEASVDKVTRLVRDSKCEY-PAACNALETLLI 288 (463)
T ss_dssp -----CCCSEEEEESCHHHHHHHHHHCS---SSCBCSCSCCCEEEEECTTCCTTTHHHHHHHHHHSC-TTSTTSEEEEEE
T ss_pred HHHhCCCcCEEEEECCHHHHHHHHHhcC---CCCEEEecCCcceEEEcCCCCHHHHHHHHHHHhccC-CCccccCcEEEE
Confidence 9999999999999999999999998864 899999999999999999999999999999999999 999999999999
Q ss_pred eCchHHHHHHHHHHHHhhcccCCCCCCCCcccccCCHHHHHHHHHHHHHHHHcCCEEEeCCcccCCCCceeeeEEEeeCC
Q 015042 224 QEGIYDKFEKKLLEKAKAWLVGDPFDPTVRQGPQISERHFDRILSYIEHGKREGATLLTGGKPIGDKGYYIEPTIFTNVK 303 (414)
Q Consensus 224 ~~~i~d~f~~~l~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~~~g~~~~Ptvl~~~~ 303 (414)
|+++|| ||+ +.+++++++++|++++.|+... ..++|+ +
T Consensus 289 ~~~i~d-------------------------~p~--------~~~~i~~~~~~Ga~v~~G~~~~-~~g~~~--------~ 326 (463)
T 2h5g_A 289 HRDLLR-------------------------TPL--------FDQIIDMLRVEQVKIHAGPKFA-SYLTFS--------P 326 (463)
T ss_dssp EGGGTT-------------------------SHH--------HHHHHHHHHHTTCEEEECHHHH-C--------------
T ss_pred eccccc-------------------------hHH--------HHHHHHHHHhCCCEEEeCCccc-ccCccC--------C
Confidence 999998 233 2345778888999998555422 234442 5
Q ss_pred CcccccccceecceEEEEeeCCHHHHHHHhhcCCCCceEEEecCCHHHHHHHHHhcceeEEEEcCcCCCCCCCCcccCCC
Q 015042 304 EDMIIAKEEIFGPVMALMKFKTVEEAIKSANNTQYGLAAGIVTKDLNVANTVSRSIRAGIIWINCYFGFSMDCPYGGYKM 383 (414)
Q Consensus 304 ~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~sv~s~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~p~gG~~~ 383 (414)
++|.+++||+||||++|++|+|+||||+++|++++||++||||+|.+.++++++++++|+|+||++....+.+||||+|.
T Consensus 327 ~~~~i~~eE~FgPvl~v~~~~~~deAi~~aN~~~~gLaa~v~t~d~~~a~~~~~~l~aG~V~iN~~~~~~~~~PfGG~k~ 406 (463)
T 2h5g_A 327 SEVKSLRTEYGDLELCIEVVDNVQDAIDHIHKYGSSHTDVIVTEDENTAEFFLQHVDSACVFWNASTRFSDGYRFGLGAE 406 (463)
T ss_dssp ---CCSSCCCCSSEEEEEEESSHHHHHHHHHHHCCSSEEEEECSCHHHHHHHHHHCCSSEEEESSCGGGCSTTTTTSSCC
T ss_pred CCchHHhccccCceEEEEEeCCHHHHHHHHHcCCCCceEEEEeCCHHHHHHHHHhCCeeEEEEeCCccCCCCCCCCCCcc
Confidence 78999999999999999999999999999999999999999999999999999999999999999877778899999999
Q ss_pred CCCC--cc--chHHHHHhhheeeEEEeeCC
Q 015042 384 SGFG--RE--YGLESLYKYLQIKSVVTPIY 409 (414)
Q Consensus 384 sG~g--~~--~g~~~~~~~~~~k~i~~~~~ 409 (414)
||+| ++ +|++|+++|+++|+|+.+.+
T Consensus 407 SG~G~~r~~~~G~~gl~~ft~~K~v~~~~~ 436 (463)
T 2h5g_A 407 VGISTSRIHARGPVGLEGLLTTKWLLRGKD 436 (463)
T ss_dssp SCEECCSSSCCEECCGGGGEEEEEEEECSS
T ss_pred CcCCCCcccCCCHHHHHHhceeEEEEECCC
Confidence 9999 65 99999999999999987653
|
| >4ghk_A Gamma-glutamyl phosphate reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.25A {Burkholderia thailandensis} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.6e-72 Score=566.11 Aligned_cols=360 Identities=22% Similarity=0.215 Sum_probs=305.2
Q ss_pred CHHHHHHHHHhHHHHHHHHHHhcCCChH----HHhh-------chHHHHHHHHHHHHHhhhhhcCccccc---CCCcccc
Q 015042 1 MWKFADLIEEHVEELAALDALDAGKVYL----RAKT-------AEIPGAAEFLRFFAGAADKIHGEVLKM---SSELQGY 66 (414)
Q Consensus 1 L~~~a~~l~~~~~~l~~~~~~etGk~~~----e~~~-------~ei~~~~~~l~~~a~~~~~~~~~~~~~---~~~~~~~ 66 (414)
|+++++.|++|+++|++++++|+||+.. ++.. .|+..+++.+++++.+.+.. +...+. ..+...+
T Consensus 54 L~~~a~~l~~~~~ela~~~~~e~gk~~~~g~~ea~~~~~~~~~~~v~~~~~~l~~~a~~~~~~-g~~~~~~~~~~~~~~~ 132 (444)
T 4ghk_A 54 LEAVARAIERDAGALKAANARDVARAKDKGLDAAFVDRLTLSDKALKTMVEGLRQVATLPDPI-GEMSNLKYRPSGIQVG 132 (444)
T ss_dssp HHHHHHHHHHSHHHHHHHHHHHHCC------CCSHHHHHCCCTTHHHHHHHHHHHHHHSCCCT-TCEEEEEECTTSCEEE
T ss_pred HHHHHHHHHhhHHHHHHHHHHHHhhhhhccchHHHHHHhhccHHHHHHHHHHHHHHHhhcccc-CccCCcccCCCCccce
Confidence 5789999999999999999999999853 3221 37899999999999887543 443332 2345678
Q ss_pred eeecCCceEEEEcCCccchHHHHHhHHHHHhhCCeEEeecCCCChHHHHHHHHHH----HHcCCCCCcEEEEeCCch-hh
Q 015042 67 TLREPVGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLTALYYAHLA----KLAGIPDGVLNVVPGFGP-TA 141 (414)
Q Consensus 67 ~~~~P~Gvv~~i~p~n~P~~~~~~~~~~aLaaGN~vv~kps~~~~~~~~~l~~~l----~~aG~p~g~v~~v~~~~~-~~ 141 (414)
++++|+|||++|+||| | ...++++++||++||+||+|||+.+|.++..+.+++ .++|+|+|+++++++.+. +.
T Consensus 133 ~~~~P~GVV~~I~p~n-P-~~~~~~~~~ALaaGN~VVlKps~~tp~t~~~l~~l~~~~l~~aGlP~gvv~vv~g~~~~~~ 210 (444)
T 4ghk_A 133 QMRVPLGVIGIIYESR-P-NVTIDAAALCLKSGNATILRGGSEALESNTALAKLIGEGLAEAGLPQDTVQVVETADRAAV 210 (444)
T ss_dssp EEEEECSEEEEECCSC-H-HHHHHHHHHHHHTTCEEEEECCGGGHHHHHHHHHHHHHHHHHTTCCGGGEEECCCCCTHHH
T ss_pred EEEeccEEEEEEeCCC-c-HHHHHHHHHHHHcCCEEEEECCccchHHHHHHHHHHHHHHHHcCCCcccEEEEeCCCHHHH
Confidence 9999999999999998 8 688899999999999999999999999999999996 799999999999998654 57
Q ss_pred HHHhhhCCCccEEEEeCCcHHHHHHHHHHHhcccceeEEEcCCCCCceEcCCCCHHHHHHHHHHHhhccCCCCcccCceE
Q 015042 142 GAAICSHMDIDYVCFTGSTDVGRLVMQAAAASNLKQVSLELGGKSPLLIFDDADLDTAADVALLGNLYNKGEICVASSRV 221 (414)
Q Consensus 142 ~~~l~~~~~v~~v~~tGs~~~g~~i~~~~a~~~~~~~~~e~gg~~~~iV~~dadl~~aa~~i~~~~~~~~Gq~C~a~~~i 221 (414)
++.|..||+||+|+||||+.+|+.+++.+ ++|+++|+|||||+||++|||++.|++.+++++|.|+| .|++++||
T Consensus 211 ~~~L~~~p~vd~V~fTGs~~vg~~v~~~a----~~pv~lELGGk~p~IV~~dADl~~Aa~~i~~~~~~n~G-~C~a~~rv 285 (444)
T 4ghk_A 211 GRLITMTEYVDVIVPRGGKSLIERLINEA----RVPMIKHLDGICHVYVDDRASVTKALTVCDNAKTHRYG-TCNTMETL 285 (444)
T ss_dssp HHHTTCTTTCSEEEECSCHHHHHHHHHHC----CSCBCCCCCCCCEEEECTTCCHHHHHHHCC----------CCCCCEE
T ss_pred HHHHhcCCCccEEEEECcHHHHHHHHHhC----CCCEEEEcCCcCeEEECCCCCHHHHHHHHHHHhcCCCc-ccCcCceE
Confidence 88888999999999999999999998764 69999999999999999999999999999999999999 99999999
Q ss_pred EEeCchHHHHHHHHHHHHhhccc---CCCCCCCCcccccCCHHHHHHHHHHHHHHHHcCCEEEeCCcccCCCCceeeeEE
Q 015042 222 FVQEGIYDKFEKKLLEKAKAWLV---GDPFDPTVRQGPQISERHFDRILSYIEHGKREGATLLTGGKPIGDKGYYIEPTI 298 (414)
Q Consensus 222 ~V~~~i~d~f~~~l~~~~~~~~~---g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~~~g~~~~Ptv 298 (414)
|||+++||+|+++|++.++++++ |+|. ..++++++. .| +
T Consensus 286 lV~~~i~d~f~~~l~~~~~~~~~~~~g~p~-----------------~~~~i~~a~---------------~G------~ 327 (444)
T 4ghk_A 286 LVARGIAPAVLSPLGRLYREKGVELRVDAD-----------------ARAVLEAAG---------------VG------P 327 (444)
T ss_dssp EEEGGGHHHHHHHHHHHHHHTTCEEEECHH-----------------HHHHHHHTT---------------CC------C
T ss_pred EEeHHHHHHHHHHHHHHHHHcCCeecCCHH-----------------HHHHHHhcc---------------cC------c
Confidence 99999999999999999999887 6542 135555542 11 1
Q ss_pred EeeCCCcccccccceecceEEEEeeCCHHHHHHHhhcCCCCceEEEecCCHHHHHHHHHhcceeEEEEcCcCCCCCCCCc
Q 015042 299 FTNVKEDMIIAKEEIFGPVMALMKFKTVEEAIKSANNTQYGLAAGIVTKDLNVANTVSRSIRAGIIWINCYFGFSMDCPY 378 (414)
Q Consensus 299 l~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~sv~s~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~p~ 378 (414)
+ +++++.+++||+||||++|++|+|+||||+++|+++|||++||||+|.+.++++++++++|+|+||++..+.+..||
T Consensus 328 ~--~~~~~~~~~eEiFGPVl~v~~~~~~deAi~~aN~~~~gL~a~v~t~d~~~a~~~a~~l~aG~V~vN~~~~~~~~~pf 405 (444)
T 4ghk_A 328 L--VDATDEDWRTEYLAPVLAIKIVDGIDAAIEHINEYGSHHTDAIVTEDHDRAMRFLREVDSASVMVNASTRFADGFEF 405 (444)
T ss_dssp C--EECCSGGGTCC---CEEEEEEESSHHHHHHHHHHHSCSSEEEEECSBHHHHHHHHHHCCSSEEEEEECGGGCSTTTT
T ss_pred c--cCCCchhhhccccCceEEEEEeCCHHHHHHHHHhCCCCceEEEEeCCHHHHHHHHHhCCcceEEEcCCCccCCCCCc
Confidence 1 35678999999999999999999999999999999999999999999999999999999999999998887888999
Q ss_pred ccCCCCCCC----ccchHHHHHhhheeeEEEeeC
Q 015042 379 GGYKMSGFG----REYGLESLYKYLQIKSVVTPI 408 (414)
Q Consensus 379 gG~~~sG~g----~~~g~~~~~~~~~~k~i~~~~ 408 (414)
||.|+||+| +++|++|+++||++|+|+++.
T Consensus 406 Gg~~~sG~g~~~~~~~G~~gl~~~t~~K~v~~~~ 439 (444)
T 4ghk_A 406 GLGAEIGISNDKLHARGPVGLEGLTSLKYVVLGH 439 (444)
T ss_dssp TCSCCSEEECCSSSCCEEECGGGGEEEEEEEEEE
T ss_pred CCcccccccCCcccCCChhHHHhhceEEEEEECC
Confidence 999999998 678999999999999998764
|
| >1o20_A Gamma-glutamyl phosphate reductase; TM0293, structural genom JCSG, PSI, protein structure initiative, joint center for S genomics; 2.00A {Thermotoga maritima} SCOP: c.82.1.1 | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-72 Score=564.40 Aligned_cols=359 Identities=20% Similarity=0.234 Sum_probs=315.9
Q ss_pred CHHHHHHHHHhHHHHHHHHHHhcCCCh----HHHh-------hchHHHHHHHHHHHHHhhhhhcCccccc---CCCcccc
Q 015042 1 MWKFADLIEEHVEELAALDALDAGKVY----LRAK-------TAEIPGAAEFLRFFAGAADKIHGEVLKM---SSELQGY 66 (414)
Q Consensus 1 L~~~a~~l~~~~~~l~~~~~~etGk~~----~e~~-------~~ei~~~~~~l~~~a~~~~~~~~~~~~~---~~~~~~~ 66 (414)
|+++++.|++|+++|++++++|+||+. .+.. ..|+..+++.+++++.+.++ .+...+. ..+...+
T Consensus 42 L~~~a~~l~~~~~~la~~~~~e~gk~~~~g~~ea~~~~~~~~~~ev~~~~~~l~~~a~~~~~-~g~~~~~~~~~~~~~~~ 120 (427)
T 1o20_A 42 IKKIAEKLDERRKEILEANRIDVEKARERGVKESLVDRLALNDKRIDEMIKACETVIGLKDP-VGEVIDSWVREDGLRIA 120 (427)
T ss_dssp HHHHHHHHHHTHHHHHHHHHHHHHHHHHTTCCHHHHHHHCCCHHHHHHHHHHHHHHHHSCCC-TTCEEEEEECTTSCEEE
T ss_pred HHHHHHHHHHhHHHHHHHHHHHhhccccccccHHHHHHHhcCHHHHHHHHHHHHHHHhcccc-cCccccccccCCCceeE
Confidence 578999999999999999999999885 3432 25899999999999987765 3443332 1234568
Q ss_pred eeecCCceEEEEcCCccchHHHHHhHHHHHhhCCeEEeecCCCChHHHHHHHHHHH----HcCCCCCcEEEEeCC-chhh
Q 015042 67 TLREPVGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLTALYYAHLAK----LAGIPDGVLNVVPGF-GPTA 141 (414)
Q Consensus 67 ~~~~P~Gvv~~i~p~n~P~~~~~~~~~~aLaaGN~vv~kps~~~~~~~~~l~~~l~----~aG~p~g~v~~v~~~-~~~~ 141 (414)
.+++|+|||++|+||| +...++++++||++||+||+|||+.+|+++..+++++. ++|+|+|++|++++. ..+.
T Consensus 121 ~~~~P~GVV~~I~p~p--~~~~~~~~~~ALaaGNtVVlKps~~tp~t~~~l~~l~~~al~eaGlP~gvv~vv~g~~~~~~ 198 (427)
T 1o20_A 121 RVRVPIGPIGIIYESR--PNVTVETTILALKSGNTILLRGGSDALNSNKAIVSAIREALKETEIPESSVEFIENTDRSLV 198 (427)
T ss_dssp EEEEECCCEEEECCSC--THHHHHHHHHHHHTTCCEEEECCGGGHHHHHHHHHHHHHHHTTSSSCGGGEEECCCCCTHHH
T ss_pred EEeecceeEEEEecCC--hHHHHHHHHHHHHcCCEEEEECCHhHHHHHHHHHHHHHHHHHHcCCCcccEEEecCCChHHH
Confidence 8999999999999875 57889999999999999999999999999999999987 689999999999984 4567
Q ss_pred HHHhhhCCCccEEEEeCCcHHHHHHHHHHHhcccceeEEEcCCCCCceEcCCCCHHHHHHHHHHHhhccCCCCcccCceE
Q 015042 142 GAAICSHMDIDYVCFTGSTDVGRLVMQAAAASNLKQVSLELGGKSPLLIFDDADLDTAADVALLGNLYNKGEICVASSRV 221 (414)
Q Consensus 142 ~~~l~~~~~v~~v~~tGs~~~g~~i~~~~a~~~~~~~~~e~gg~~~~iV~~dadl~~aa~~i~~~~~~~~Gq~C~a~~~i 221 (414)
++.|..||+||+|.||||+.+|+.|++.+ .+|+++|+|||||+||++|||++.|++.+++++|.|+| .|++++||
T Consensus 199 ~~~L~~~~~v~~I~fTGS~~~G~~i~~~a----~~~v~lELGGk~p~iV~~dADl~~Aa~~i~~~~f~n~G-~C~a~~rv 273 (427)
T 1o20_A 199 LEMIRLREYLSLVIPRGGYGLISFVRDNA----TVPVLETGVGNCHIFVDESADLKKAVPVIINAKTQRPG-TCNAAEKL 273 (427)
T ss_dssp HHHTTCTTTCSEEEECSCHHHHHHHHHHC----SSCBCCCCCCCEEEEECTTSCHHHHHHHHHHHHHSCTT-STTSEEEE
T ss_pred HHHHhCCCCccEEEeCCChHHHHHHHHhc----CCCEEEecCCCceEEEeCCCCHHHHHHHHHHHhccCCC-CCCCccEE
Confidence 88999999999999999999999999875 49999999999999999999999999999999999999 99999999
Q ss_pred EEeCchHHHHHHHHHHHHhhcccCCCCCCCCcccccCCHHHHHHHHHHHHHHHHcCCEEEeCCcccCCCCceeeeEEEee
Q 015042 222 FVQEGIYDKFEKKLLEKAKAWLVGDPFDPTVRQGPQISERHFDRILSYIEHGKREGATLLTGGKPIGDKGYYIEPTIFTN 301 (414)
Q Consensus 222 ~V~~~i~d~f~~~l~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~~~g~~~~Ptvl~~ 301 (414)
|||+++||+|+++|++.+++++++ ++||... .+ |+ |||
T Consensus 274 ~V~~~i~d~f~~~l~~~~~~~~~~-----------------------------------~~gg~~~--~~-~~-Ptl--- 311 (427)
T 1o20_A 274 LVHEKIAKEFLPVIVEELRKHGVE-----------------------------------VRGCEKT--RE-IV-PDV--- 311 (427)
T ss_dssp EEEHHHHHHHHHHHHHHHHHTTCE-----------------------------------EEECHHH--HH-HS-TTS---
T ss_pred EEehhhHHHHHHHHHHHHHHcCCe-----------------------------------eecChhh--hh-hC-Ccc---
Confidence 999999999999999999987652 1122211 12 33 886
Q ss_pred CCCcccccccceecceEEEEeeCCHHHHHHHhhcCCCCceEEEecCCHHHHHHHHHhcceeEEEEcCcCCCCCCCCcccC
Q 015042 302 VKEDMIIAKEEIFGPVMALMKFKTVEEAIKSANNTQYGLAAGIVTKDLNVANTVSRSIRAGIIWINCYFGFSMDCPYGGY 381 (414)
Q Consensus 302 ~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~sv~s~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~p~gG~ 381 (414)
+++++.+++||+||||++|++|+|+||||+++|+++|||++||||+|.+.++++++++++|.|+||++....+.+||||.
T Consensus 312 ~~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~~G~V~iN~~~~~~~~~pfGg~ 391 (427)
T 1o20_A 312 VPATEDDWPTEYLDLIIAIKVVKNVDEAIEHIKKYSTGHSESILTENYSNAKKFVSEIDAAAVYVNASTRFTDGGQFGFG 391 (427)
T ss_dssp EECCGGGTTCCCCSSEEEEEEESSHHHHHHHHHHHCCSSEEEEECSCHHHHHHHHHHCCSSEEEESSCGGGCSTTTTTCS
T ss_pred cCCCcchhhcccccceEEEEEECCHHHHHHHHHhCCCCCeEEEEeCCHHHHHHHHHhCCccEEEECCCCccCCCCCCCCc
Confidence 24578899999999999999999999999999999999999999999999999999999999999998777788999999
Q ss_pred CCCCCC----ccchHHHHHhhheeeEEEeeCC
Q 015042 382 KMSGFG----REYGLESLYKYLQIKSVVTPIY 409 (414)
Q Consensus 382 ~~sG~g----~~~g~~~~~~~~~~k~i~~~~~ 409 (414)
|+||+| +++|++|+++|+++|+|+.+.+
T Consensus 392 ~~SG~g~~~~~~~g~~gl~~~~~~k~v~~~~~ 423 (427)
T 1o20_A 392 AEIGISTQRFHARGPVGLRELTTYKFVVLGEY 423 (427)
T ss_dssp CCSCEECSSSSCCEECCTGGGEEEEEEEECSS
T ss_pred ccccccCCcccCCChHHHHHHhceEEEEECCC
Confidence 999997 4679999999999999988754
|
| >3my7_A Alcohol dehydrogenase/acetaldehyde dehydrogenase; ACDH, PSI, MCSG, structural genomics, midwest center for STR genomics; 2.30A {Vibrio parahaemolyticus} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.7e-71 Score=557.69 Aligned_cols=383 Identities=19% Similarity=0.243 Sum_probs=314.4
Q ss_pred CHHHHHHHHHhHHHHHHHHHHhcCCChHHHhhchHHHHHHHH-HHHHHhhhhhcCcccccCCCcccceeecCCceEEEEc
Q 015042 1 MWKFADLIEEHVEELAALDALDAGKVYLRAKTAEIPGAAEFL-RFFAGAADKIHGEVLKMSSELQGYTLREPVGVVGHII 79 (414)
Q Consensus 1 L~~~a~~l~~~~~~l~~~~~~etGk~~~e~~~~ei~~~~~~l-~~~a~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~ 79 (414)
|+++++.|++|+++|+++++.|+|||..++...|+..+.+.+ ++++. .+. ...++.+.+...+.+++|+|||++|+
T Consensus 35 l~~~a~~l~~~~~~la~~~~~e~Gk~~~e~~~~~~~~a~~~~~~~~~~--~~~-~g~~~~~~~~~~~~~~~P~GVv~~I~ 111 (452)
T 3my7_A 35 FRAASLAANQARIPLAQQAVEESGMGIVEDKVIKNHFASEFIYNKYKD--EQT-CGILEEDDNLGTMTIAEPVGIICGIV 111 (452)
T ss_dssp HHHHHHHHHHTHHHHHHHHHHHHCCSCHHHHHHHHHHHHHHHHHHHTT--CCC-SEEC-------CEEEEEECCEEEEEE
T ss_pred HHHHHHHHHHhHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHhhh--ccc-cccccCCCCCceEEEecCceEEEEEc
Confidence 578999999999999999999999999987655777777766 33332 111 12223234456789999999999999
Q ss_pred CCccchHHHHHhHHHHHhhCCeEEeecCCCChHHHHHHHHHHH----HcCCCCCcEEEEeCCchhhHHHhhhCCCccEEE
Q 015042 80 PWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLTALYYAHLAK----LAGIPDGVLNVVPGFGPTAGAAICSHMDIDYVC 155 (414)
Q Consensus 80 p~n~P~~~~~~~~~~aLaaGN~vv~kps~~~~~~~~~l~~~l~----~aG~p~g~v~~v~~~~~~~~~~l~~~~~v~~v~ 155 (414)
|||||+...++++++||++||+||+|||+.+|.++..+++++. ++|+|+|+++++++++.+.++.|+.||+||+|+
T Consensus 112 P~N~P~~~~~~k~~~ALaaGN~VVlKps~~tp~~~~~~~~~~~~a~~~aG~P~gvv~~v~g~~~~~~~~L~~~p~v~~V~ 191 (452)
T 3my7_A 112 PTTNPTSTAIFKSLISLKTRNGIIFSPHPRAKNSTNDAAKLVLDAAVAAGAPKDIIGWIDQPSVELSNALMKHDDIALIL 191 (452)
T ss_dssp CTTSTTHHHHHHHHHHHHTTCEEEEEECGGGHHHHHHHHHHHHHHHHHTTCCTTSEEECSSCCHHHHHHHHHCTTCCEEE
T ss_pred CCCChHHHHHHHHHHHHhcCCeEEEEcCCCchHHHHHHHHHHHHHHHHcCCCcCcEEEEcCCCHHHHHHHHhCCCccEEE
Confidence 9999999999999999999999999999999999998887764 799999999999998888999999999999999
Q ss_pred EeCCcHHHHHHHHHHHhcccceeEEEcCCCCCceEcCCCCHHHHHHHHHHHhhccCCCCcccCceEEEeCchHHHHHHHH
Q 015042 156 FTGSTDVGRLVMQAAAASNLKQVSLELGGKSPLLIFDDADLDTAADVALLGNLYNKGEICVASSRVFVQEGIYDKFEKKL 235 (414)
Q Consensus 156 ~tGs~~~g~~i~~~~a~~~~~~~~~e~gg~~~~iV~~dadl~~aa~~i~~~~~~~~Gq~C~a~~~i~V~~~i~d~f~~~l 235 (414)
||||+..++ .++ ++++|+++|+|||+|+||++|||++.|++.+++++|+|+||.|+++++||||+++||+|+++|
T Consensus 192 fTGs~~~~~----~a~-~~~kp~~~e~gG~~p~iV~~dADl~~Aa~~iv~s~~~~~GQ~C~a~~rv~V~~~i~d~f~~~l 266 (452)
T 3my7_A 192 ATGGPGMVK----AAY-SSGKPAIGVGAGNVPVVIDETADIKRAVASVLMSKTFDNGVVCASEQAVIVVDEVYDEVKERF 266 (452)
T ss_dssp ECSCHHHHH----HHH-TSSSCEEECC--CEEEEECTTSCHHHHHHHHHHGGGGGGGCCTTCEEEEEEEGGGHHHHHHHH
T ss_pred EECcHHHHH----HHH-hcCCCEEecCCCCCeEEEeCCCCHHHHHHHHHHHHhCCCCCccCCCcEEEEcHHHHHHHHHHH
Confidence 999998543 444 788999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhhcccCCCCCCCCcccccCCHHHHHHHHHHHHHHHHcCCEEEeCCccc---CCCCceeeeEE-------EeeCCCc
Q 015042 236 LEKAKAWLVGDPFDPTVRQGPQISERHFDRILSYIEHGKREGATLLTGGKPI---GDKGYYIEPTI-------FTNVKED 305 (414)
Q Consensus 236 ~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ga~v~~gg~~~---~~~g~~~~Ptv-------l~~~~~~ 305 (414)
+++ .||++++++++++.++++++...|+++ +||... ...|+|++||+ +.+++++
T Consensus 267 ~~~---------------~gpli~~~~~~~v~~~i~~~~~~~a~v-~G~~~~~~~~~~G~~v~pt~~vl~~~~~~~v~~~ 330 (452)
T 3my7_A 267 ASH---------------KAHVLSKTDADKVRKVLLIDGALNAKI-VGQPATAIAEMAGVKVPADTKVLIGEGLGKVSYD 330 (452)
T ss_dssp HTT---------------TEEECCHHHHHHHHHHHEETTEECGGG-TTCCHHHHHHHHTCCCCTTCCEEEEECSSSCCTT
T ss_pred HHh---------------CCCcCCHHHHHHHHHHHHhhcccCCeE-ecCccchhHHhCCceeCCCeeEEeeccccCCCCc
Confidence 874 389999999999999998776667776 466542 13589999997 5678889
Q ss_pred ccccccceecceEEEEeeCCHHHHHHHhhcCC----CCceEEEecCCHHHHHH---HHHhcceeEEEEcCcCCCC-----
Q 015042 306 MIIAKEEIFGPVMALMKFKTVEEAIKSANNTQ----YGLAAGIVTKDLNVANT---VSRSIRAGIIWINCYFGFS----- 373 (414)
Q Consensus 306 ~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~----~gl~~sv~s~d~~~~~~---~~~~l~~g~v~iN~~~~~~----- 373 (414)
+++.+ |+||||++|++|+|+||||+++|++. |||+++|||+|.+.+++ +++++++|+|+||++..+.
T Consensus 331 ~~~~~-E~FgPVl~v~~~~~~~eAi~~an~~~~~~g~Glta~i~t~d~~~a~~i~~~a~~l~~G~V~VN~~~~~Gg~G~~ 409 (452)
T 3my7_A 331 DAFAH-EKLSPTLGMFRADNFEDAVAQAVTMVEIGGIGHTSGLYTNQDVNADRIRYFGDKMKTARILINIPTTHGGIGDL 409 (452)
T ss_dssp CGGGS-CCSSSEEEEEEESSHHHHHHHHHHHHHHHSSCCEEEEESCTTTCHHHHHHHHHHCCCSEEEESCCCC-------
T ss_pred chhhc-CccCcEEEEEEeCCHHHHHHHHHhcccccCCCCEEEEEcCCHHHHHHHHHHHHhCCEEEEEECCCCCCcccccc
Confidence 99876 89999999999999999999999985 99999999999887777 9999999999999986531
Q ss_pred ------CCCCcccCCCCCCCccchHHHHHhhheeeEEEeeCC
Q 015042 374 ------MDCPYGGYKMSGFGREYGLESLYKYLQIKSVVTPIY 409 (414)
Q Consensus 374 ------~~~p~gG~~~sG~g~~~g~~~~~~~~~~k~i~~~~~ 409 (414)
+.+++ |++..|.+..+++.+.+++.+.|+|..+..
T Consensus 410 ~~f~~~~~~t~-g~g~~Gg~~~~~nv~~~~l~n~~~v~~~~~ 450 (452)
T 3my7_A 410 YNFNVAPSLTL-GCGSWGGNSISENVGPKHLINKKTVAKRAE 450 (452)
T ss_dssp ----------------------CCCCCGGGGEEEEEEECCC-
T ss_pred cccCcCceEee-eccccCCCccCCCCChhHeeeeeEEEeecC
Confidence 11222 666777777888899999999999977653
|
| >1kae_A HDH, histidinol dehydrogenase; L-histidinol dehydrogenase, homodimer, rossman fold, 4 domai L-histidine biosynthesis, NAD cofactor; HET: HSO NAD; 1.70A {Escherichia coli} SCOP: c.82.1.2 PDB: 1k75_A* 1kah_A* 1kar_A | Back alignment and structure |
|---|
Probab=97.75 E-value=0.018 Score=55.70 Aligned_cols=260 Identities=19% Similarity=0.178 Sum_probs=151.2
Q ss_pred CCcccceeecCCceEEEEcCC---ccchHHHHHhHHHHHhhCCeEEeecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCC
Q 015042 61 SELQGYTLREPVGVVGHIIPW---NFPTTMFFMKVSPALAAGCTMIVKPAEQTPLTALYYAHLAKLAGIPDGVLNVVPGF 137 (414)
Q Consensus 61 ~~~~~~~~~~P~Gvv~~i~p~---n~P~~~~~~~~~~aLaaGN~vv~kps~~~~~~~~~l~~~l~~aG~p~g~v~~v~~~ 137 (414)
.|.....++.|+--|++..|. -||. ++++..+||-.+|..=|+--+|-. ....+.-+...+|+. .+..-.
T Consensus 113 ~Gv~~gq~~~Pi~rvGlYVPGG~a~ypS-svLM~aiPAkVAGV~~Iv~~tPp~--i~p~iL~AA~l~Gv~----eIy~vG 185 (434)
T 1kae_A 113 PGVRCQQVTRPVASVGLYIPGGSAPLFS-TVLMLATPASIAGCKKVVLCSPPP--IADEILYAAQLCGVQ----DVFNVG 185 (434)
T ss_dssp TTEEEEEEEEECSEEEEECCCSSSCCTH-HHHHHHHHHHHHTCSEEEEEECSS--CCHHHHHHHHHTTCC----EEEECC
T ss_pred CCcEEEEEEeehheEEEEecCCCCCchh-HHHHhhccHhhcCCCeEEEECCCC--CCHHHHHHHHHcCCC----EEeecc
Confidence 355566778899999999997 4664 555568899999987655433321 112233334556655 233322
Q ss_pred chhhHHHhh----hCCCccEEEEeCCcHHHHHHHHHHH-hcccceeEE-EcCCCCC--ceEcCCCCHHHHHHHHHHHhhc
Q 015042 138 GPTAGAAIC----SHMDIDYVCFTGSTDVGRLVMQAAA-ASNLKQVSL-ELGGKSP--LLIFDDADLDTAADVALLGNLY 209 (414)
Q Consensus 138 ~~~~~~~l~----~~~~v~~v~~tGs~~~g~~i~~~~a-~~~~~~~~~-e~gg~~~--~iV~~dadl~~aa~~i~~~~~~ 209 (414)
|.....+|. .-|.||.|+=.|..-+... ++.. ...+ .+-. -..|-+= +|-+++||.+..+..++.-+=+
T Consensus 186 GAQAIAAlAyGTetIp~VDkI~GPGN~yVa~A--Kr~Vs~~~G-~VgIDm~AGPSEilViAD~tAnp~~vAaDLLsQAEH 262 (434)
T 1kae_A 186 GAQAIAALAFGTESVPKVDKIFGPGNAFVTEA--KRQVSQRLD-GAAIDMPAGPSEVLVIADSGATPDFVASDLLSQAEH 262 (434)
T ss_dssp HHHHHHHHHHCCSSSCCCSEEECCCCHHHHHH--HHHHHHCTT-SCEESCCCCCCEEEEEECTTSCHHHHHHHHHHHHTT
T ss_pred cHHHHHHHHcCCCCCCCccEEECCCcHHHHHH--HHHhHhhcC-ccccCCCCCCceEEEEeCCCCCHHHHHHHHHHHhcc
Confidence 444444443 2478999998888765321 1111 0011 1111 1112222 3445678999998888876555
Q ss_pred cCCCCcccCceEEEeCchHHHHHHHHHHHHhhcccCCCCCCCCcccccCCHHHHHHHHHHHHHHHHcCCEEEeCCcccCC
Q 015042 210 NKGEICVASSRVFVQEGIYDKFEKKLLEKAKAWLVGDPFDPTVRQGPQISERHFDRILSYIEHGKREGATLLTGGKPIGD 289 (414)
Q Consensus 210 ~~Gq~C~a~~~i~V~~~i~d~f~~~l~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~~ 289 (414)
..- .+.|+|..+ ++|.++..+.+.+..-.- | .. +.++.++.
T Consensus 263 d~~-----a~aiLvT~s--~~la~~V~~ev~~ql~~l---------p--r~-------~ia~~sl~-------------- 303 (434)
T 1kae_A 263 GPD-----SQVILLTPA--ADMARRVAEAVERQLAEL---------P--RA-------ETARQALN-------------- 303 (434)
T ss_dssp CTT-----CEEEEEESC--HHHHHHHHHHHHHHHTTC---------T--TH-------HHHHHHHT--------------
T ss_pred CCC-----CcEEEEECC--HHHHHHHHHHHHHHHHhC---------C--hH-------HHHHHHHH--------------
Confidence 432 445677655 455555555544321100 1 11 11222221
Q ss_pred CCceeeeEEEeeCCCcccccccceecceEEEEeeCCHHHHHHHhhcCCCCceEEEecCCHHHHHHHHHhcc-eeEEEEcC
Q 015042 290 KGYYIEPTIFTNVKEDMIIAKEEIFGPVMALMKFKTVEEAIKSANNTQYGLAAGIVTKDLNVANTVSRSIR-AGIIWINC 368 (414)
Q Consensus 290 ~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~sv~s~d~~~~~~~~~~l~-~g~v~iN~ 368 (414)
.- .++.++|++||++++|..-. =..-|.++|+ ..++.+++ +|.|++..
T Consensus 304 --------------------------~~-~ii~v~~l~ea~~~~N~~AP-EHLel~~~dp---~~~l~~I~nAGaIFlG~ 352 (434)
T 1kae_A 304 --------------------------AS-RLIVTKDLAQCVEISNQYGP-EHLIIQTRNA---RELVDSITSAGSVFLGD 352 (434)
T ss_dssp --------------------------TC-EEEECSSHHHHHHHHHHHCC-SEEEEESTTH---HHHGGGCCSCSEEEEST
T ss_pred --------------------------cC-eEEEECCHHHHHHHHHHhhh-HhhhhhhcCH---HHHHhhcCcccchhcCC
Confidence 11 36678999999999998432 2457888887 45667775 89999998
Q ss_pred cCC---------CCCCCCcccCCCCCCCccchHHHHHhhheeeEEE
Q 015042 369 YFG---------FSMDCPYGGYKMSGFGREYGLESLYKYLQIKSVV 405 (414)
Q Consensus 369 ~~~---------~~~~~p~gG~~~sG~g~~~g~~~~~~~~~~k~i~ 405 (414)
++. .++-+|-+| +.++.+.-++..|+.+.++.
T Consensus 353 ~tpe~~GDY~aG~NHvLPT~G-----~AR~~sgLsV~~F~K~~s~~ 393 (434)
T 1kae_A 353 WSPESAGDYASGTNHVLPTYG-----YTATCSSLGLADFQKRMTVQ 393 (434)
T ss_dssp TCCHHHHHHTSSSCCCCCCTT-----GGGTCCCSCGGGGEEEEEEE
T ss_pred CCchhhcccccCCCcccCCCC-----ceeccCCCcHHhccceeeEE
Confidence 754 345677655 45666666788898877654
|
| >4gic_A HDH, histidinol dehydrogenase; protein structure initiative, STR genomics, PSI-biology, NEW YORK structural genomics researc consortium; 2.05A {Methylococcus capsulatus} | Back alignment and structure |
|---|
Probab=97.74 E-value=0.016 Score=55.88 Aligned_cols=261 Identities=18% Similarity=0.181 Sum_probs=149.8
Q ss_pred CCcccceeecCCceEEEEcCCc---cchHHHHHhHHHHHhhCCeEE--eecCCCChHHHHHHHHHHHHcCCCCCcEEEEe
Q 015042 61 SELQGYTLREPVGVVGHIIPWN---FPTTMFFMKVSPALAAGCTMI--VKPAEQTPLTALYYAHLAKLAGIPDGVLNVVP 135 (414)
Q Consensus 61 ~~~~~~~~~~P~Gvv~~i~p~n---~P~~~~~~~~~~aLaaGN~vv--~kps~~~~~~~~~l~~~l~~aG~p~g~v~~v~ 135 (414)
.|.....++.|+--|++..|.- ||. ++++..+||-.+|..=| ..|++.. .....+.-+...+|+. .+..
T Consensus 119 ~G~~~g~~~~Pi~~VGlYVPGG~A~ypS-svLM~aiPAkVAGV~~Iv~~tPp~~G-~i~p~iL~AA~l~Gv~----eIy~ 192 (423)
T 4gic_A 119 DGTLLGQKITPLDRVGLYVPGGKAAYPS-SVLMNAVPAKVAGVPELIMAVPAPRG-ELNALVLAAAYISGVD----RVFR 192 (423)
T ss_dssp TSCEEEEEEEECSEEEEECCCSTTCCHH-HHHHHHHHHHHHTCSEEEEECCCGGG-CCCHHHHHHHHHHTCC----EEEC
T ss_pred CCCEEEEEEEEecceeEEeeCCCCchhh-HHHHhhccHHHhCCCeEEEecCCCCC-CccHHHHHHHHhcCCc----EEEE
Confidence 5666778899999999999954 664 44556889999998733 3444321 1122233334456665 3333
Q ss_pred CCchhhHHHhhh----CCCccEEEEeCCcHHHHHHHHHHHhcccceeEEEcCCCCC-ceEcCCCCHHHHHHHHHHHhhcc
Q 015042 136 GFGPTAGAAICS----HMDIDYVCFTGSTDVGRLVMQAAAASNLKQVSLELGGKSP-LLIFDDADLDTAADVALLGNLYN 210 (414)
Q Consensus 136 ~~~~~~~~~l~~----~~~v~~v~~tGs~~~g~~i~~~~a~~~~~~~~~e~gg~~~-~iV~~dadl~~aa~~i~~~~~~~ 210 (414)
-.|.....+|.- -|.||.|+=.|+.-+.. +++.. ....-+=+..|---. +|-++++|.+..+..++.-+=+.
T Consensus 193 vGGAQAIAAlAyGTetI~~VDkIvGPGN~yVa~--AKr~v-~g~VgIDm~AGPSEilViAD~~a~p~~vAaDLlsQAEHd 269 (423)
T 4gic_A 193 IGGAQAVAALAYGTETVPRVDKIVGPGNIYVAT--AKKLV-FGQVGIDMVAGPSEILVISDGRTDPDWIAMDLFSQAEHD 269 (423)
T ss_dssp CCHHHHHHHHHHCCSSSCCCSEEECCCCHHHHH--HHHHH-BTTBEECCCCCCCEEEEEECSCSCHHHHHHHHHHHHTTC
T ss_pred cCChhhhhhhccCCCcccceeEEecCCcHHHHH--HHHHh-cCCcCcccccccceEEEEeCCCCCHHHHHHHHHHhhccC
Confidence 335554455544 67899999888876543 22222 111111111222222 34455689999998888766554
Q ss_pred CCCCcccCceEEEeCchHHHHHHHHHHHHhhcccCCCCCCCCcccccCCHHHHHHHHHHHHHHHH-cCCEEEeCCcccCC
Q 015042 211 KGEICVASSRVFVQEGIYDKFEKKLLEKAKAWLVGDPFDPTVRQGPQISERHFDRILSYIEHGKR-EGATLLTGGKPIGD 289 (414)
Q Consensus 211 ~Gq~C~a~~~i~V~~~i~d~f~~~l~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~-~ga~v~~gg~~~~~ 289 (414)
.. .+.++|..+ ++|.++..+.+.+..-.-| ..+. ++.+.. .|
T Consensus 270 ~~-----a~~iLvT~s--~~la~~V~~~i~~~l~~l~-----------r~~i-------~~~sl~~~g------------ 312 (423)
T 4gic_A 270 ED-----AQAILISPD--AAHLEAVQASIERLLPGME-----------RAEV-------IRTSLERRG------------ 312 (423)
T ss_dssp TT-----CEEEEEESC--HHHHHHHHHHHHHHGGGCT-----------THHH-------HHHHHHHHC------------
T ss_pred CC-----CeEEEEeCc--HHHHHHHHHHHHHHHhhCc-----------cHHH-------HHHHHhcCc------------
Confidence 33 445777666 4555555555544211101 1111 111221 11
Q ss_pred CCceeeeEEEeeCCCcccccccceecceEEEEeeCCHHHHHHHhhcCCCCceEEEecCCHHHHHHHHHhcc-eeEEEEcC
Q 015042 290 KGYYIEPTIFTNVKEDMIIAKEEIFGPVMALMKFKTVEEAIKSANNTQYGLAAGIVTKDLNVANTVSRSIR-AGIIWINC 368 (414)
Q Consensus 290 ~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~sv~s~d~~~~~~~~~~l~-~g~v~iN~ 368 (414)
.++.++|++|+++++|..-. =..-|.++|++ .++.+++ +|.|++..
T Consensus 313 -----------------------------~ii~v~~~~ea~~~~N~~AP-EHLel~~~~~~---~~l~~i~nAGaIFlG~ 359 (423)
T 4gic_A 313 -----------------------------GMILVDDLEQAAAVANRIAP-EHLELSVESPE---VLVESIRNAGAIFMGR 359 (423)
T ss_dssp -----------------------------EEEECSSHHHHHHHHHHHCC-SEEEEESSCHH---HHGGGCCCCSEEEEC-
T ss_pred -----------------------------eEEEEeehHHHHHHHHhhCh-HHhhhhhCCHH---HHHhhCcEeceeecCC
Confidence 25567999999999998432 24567788874 5677776 89999987
Q ss_pred cCC---------CCCCCCcccCCCCCCCccchHHHHHhhheeeEEE
Q 015042 369 YFG---------FSMDCPYGGYKMSGFGREYGLESLYKYLQIKSVV 405 (414)
Q Consensus 369 ~~~---------~~~~~p~gG~~~sG~g~~~g~~~~~~~~~~k~i~ 405 (414)
++. .++-+|-+ |..++.+.-++..|+.+.++.
T Consensus 360 ~tp~~~GDY~aG~NHvLPT~-----G~Ar~~sgLsv~~F~K~~s~~ 400 (423)
T 4gic_A 360 YTAEALGDYCAGPNHVLPTS-----GTARFSSPLGVYDFQKRSSLI 400 (423)
T ss_dssp ---------------CCCCT-----TGGGTCCCCCGGGGEEEEEEE
T ss_pred CCchhhhhcCcCCCccCCCC-----CcccccCCCCHHHeeeeeeEE
Confidence 643 23445654 455666666788898877653
|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST
Original result of RPS-BLAST against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
E-value |
| 414 | ||||
| d1o04a_ | 494 | c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), | 1e-155 | |
| d1bxsa_ | 494 | c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), | 1e-153 | |
| d1a4sa_ | 503 | c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), | 1e-128 | |
| d1wnda_ | 474 | c.82.1.1 (A:) Putative betaine aldehyde dehydrogen | 1e-111 | |
| d1uzba_ | 516 | c.82.1.1 (A:) 1-pyrroline-5-carboxylate dehydrogen | 3e-93 | |
| d1euha_ | 474 | c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), | 2e-90 | |
| d1ad3a_ | 446 | c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), | 1e-86 | |
| d1ky8a_ | 499 | c.82.1.1 (A:) Non-phosphorylating glyceraldehyde-3 | 3e-77 | |
| d1o20a_ | 414 | c.82.1.1 (A:) Gamma-glutamyl phosphate reductase { | 6e-45 | |
| d1ez0a_ | 504 | c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), | 9e-39 | |
| d1vlua_ | 436 | c.82.1.1 (A:) Gamma-glutamyl phosphate reductase { | 3e-20 |
| >d1o04a_ c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), ALDH {Human (Homo sapiens), mitochondrial [TaxId: 9606]} Length = 494 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: Aldehyde reductase (dehydrogenase), ALDH species: Human (Homo sapiens), mitochondrial [TaxId: 9606]
Score = 446 bits (1149), Expect = e-155
Identities = 217/413 (52%), Positives = 288/413 (69%), Gaps = 2/413 (0%)
Query: 1 MWKFADLIEEHVEELAALDALDAGKVYLRAKTAEIPGAAEFLRFFAGAADKIHGEVLKMS 60
+ + ADLIE LAAL+ LD GK Y+ + ++ + LR++AG ADK HG+ + +
Sbjct: 82 LNRLADLIERDRTYLAALETLDNGKPYVISYLVDLDMVLKCLRYYAGWADKYHGKTIPID 141
Query: 61 SELQGYTLREPVGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLTALYYAHL 120
+ YT EPVGV G IIPWNFP M K+ PALA G +++K AEQTPLTALY A+L
Sbjct: 142 GDFFSYTRHEPVGVCGQIIPWNFPLLMQAWKLGPALATGNVVVMKVAEQTPLTALYVANL 201
Query: 121 AKLAGIPDGVLNVVPGFGPTAGAAICSHMDIDYVCFTGSTDVGRLVMQAAAASNLKQVSL 180
K AG P GV+N+VPGFGPTAGAAI SH D+D V FTGST++GR++ AA +SNLK+V+L
Sbjct: 202 IKEAGFPPGVVNIVPGFGPTAGAAIASHEDVDKVAFTGSTEIGRVIQVAAGSSNLKRVTL 261
Query: 181 ELGGKSPLLIFDDADLDTAADVALLGNLYNKGEICVASSRVFVQEGIYDKFEKKLLEKAK 240
ELGGKSP +I DAD+D A + A +N+G+ A SR FVQE IYD+F ++ + +AK
Sbjct: 262 ELGGKSPNIIMSDADMDWAVEQAHFALFFNQGQCSCAGSRTFVQEDIYDEFVERSVARAK 321
Query: 241 AWLVGDPFDPTVRQGPQISERHFDRILSYIEHGKREGATLLTGGKPIGDKGYYIEPTIFT 300
+ +VG+PFD QGPQ+ E F +IL YI GK+EGA LL GG D+GY+I+PT+F
Sbjct: 322 SRVVGNPFDSKTEQGPQVDETQFKKILGYINTGKQEGAKLLCGGGIAADRGYFIQPTVFG 381
Query: 301 NVKEDMIIAKEEIFGPVMALMKFKTVEEAIKSANNTQYGLAAGIVTKDLNVANTVSRSIR 360
+V++ M IAKEEIFGPVM ++KFKT+EE + ANN+ YGLAA + TKDL+ AN +S++++
Sbjct: 382 DVQDGMTIAKEEIFGPVMQILKFKTIEEVVGRANNSTYGLAAAVFTKDLDKANYLSQALQ 441
Query: 361 AGIIWINCYFGFSMDCPYGGYKMSGFGREYGLESLYKYLQIKSVV--TPIYNS 411
AG +W+NCY F P+GGYKMSG GRE G L Y ++K+V P NS
Sbjct: 442 AGTVWVNCYDVFGAQSPFGGYKMSGSGRELGEYGLQAYTEVKTVTVKVPQKNS 494
|
| >d1bxsa_ c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), ALDH {Sheep (Ovis aries) [TaxId: 9940]} Length = 494 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: Aldehyde reductase (dehydrogenase), ALDH species: Sheep (Ovis aries) [TaxId: 9940]
Score = 441 bits (1135), Expect = e-153
Identities = 218/405 (53%), Positives = 296/405 (73%)
Query: 1 MWKFADLIEEHVEELAALDALDAGKVYLRAKTAEIPGAAEFLRFFAGAADKIHGEVLKMS 60
+ K ADLIE LA ++A++ GK++ A ++ G + LR+ AG ADKI G + M
Sbjct: 82 LNKLADLIERDRLLLATMEAMNGGKLFSNAYLMDLGGCIKTLRYCAGWADKIQGRTIPMD 141
Query: 61 SELQGYTLREPVGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLTALYYAHL 120
YT EPVGV G IIPWNFP MF K+ PAL+ G T++VKPAEQTPLTAL+ L
Sbjct: 142 GNFFTYTRSEPVGVCGQIIPWNFPLLMFLWKIGPALSCGNTVVVKPAEQTPLTALHMGSL 201
Query: 121 AKLAGIPDGVLNVVPGFGPTAGAAICSHMDIDYVCFTGSTDVGRLVMQAAAASNLKQVSL 180
K AG P GV+N+VPG+GPTAGAAI SHMD+D V FTGST+VG+L+ +AA SNLK+VSL
Sbjct: 202 IKEAGFPPGVVNIVPGYGPTAGAAISSHMDVDKVAFTGSTEVGKLIKEAAGKSNLKRVSL 261
Query: 181 ELGGKSPLLIFDDADLDTAADVALLGNLYNKGEICVASSRVFVQEGIYDKFEKKLLEKAK 240
ELGGKSP ++F DADLD A + A G Y++G+ C+A+SR+FV+E IYD+F ++ +E+AK
Sbjct: 262 ELGGKSPCIVFADADLDNAVEFAHQGVFYHQGQCCIAASRLFVEESIYDEFVRRSVERAK 321
Query: 241 AWLVGDPFDPTVRQGPQISERHFDRILSYIEHGKREGATLLTGGKPIGDKGYYIEPTIFT 300
+++G+P P V QGPQI + +++IL IE GK+EGA L GG P G+KGY+I+PT+F+
Sbjct: 322 KYVLGNPLTPGVSQGPQIDKEQYEKILDLIESGKKEGAKLECGGGPWGNKGYFIQPTVFS 381
Query: 301 NVKEDMIIAKEEIFGPVMALMKFKTVEEAIKSANNTQYGLAAGIVTKDLNVANTVSRSIR 360
+V +DM IAKEEIFGPV +MKFK++++ IK ANNT YGL+AGI T D++ A TVS +++
Sbjct: 382 DVTDDMRIAKEEIFGPVQQIMKFKSLDDVIKRANNTFYGLSAGIFTNDIDKAITVSSALQ 441
Query: 361 AGIIWINCYFGFSMDCPYGGYKMSGFGREYGLESLYKYLQIKSVV 405
+G +W+NCY S CP+GG+KMSG GRE G ++Y ++K+V
Sbjct: 442 SGTVWVNCYSVVSAQCPFGGFKMSGNGRELGEYGFHEYTEVKTVT 486
|
| >d1a4sa_ c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), ALDH {Baltic cod (Gadus callarias) [TaxId: 8053]} Length = 503 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: Aldehyde reductase (dehydrogenase), ALDH species: Baltic cod (Gadus callarias) [TaxId: 8053]
Score = 377 bits (968), Expect = e-128
Identities = 161/421 (38%), Positives = 257/421 (61%), Gaps = 11/421 (2%)
Query: 1 MWKFADLIEEHVEELAALDALDAGKVYLRAKTAEIPGAAEFLRFFAGAADKIHGEVLKMS 60
M + A +I E + +A L+ ++ GK +I A + + ++AG A + G+ +++
Sbjct: 86 MLEAARIIRERRDNIAKLEVINNGKTI-TEAEYDIDAAWQCIEYYAGLAPTLSGQHIQLP 144
Query: 61 SELQGYTLREPVGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLTALYYAHL 120
YT REP+GV I+ WN+P + K +PALA G ++ KP+ TP+T + A +
Sbjct: 145 GGAFAYTRREPLGVCAGILAWNYPFMIAAWKCAPALACGNAVVFKPSPMTPVTGVILAEI 204
Query: 121 AKLAGIPDGVLNVVPGFGPTAGAAICSHMDIDYVCFTGSTDVGRLVMQAAAASNLKQVSL 180
AG+P G++NVV G G G+ +C H ++ V FTGS G+ VM+ +A +K V+L
Sbjct: 205 FHEAGVPVGLVNVVQG-GAETGSLLCHHPNVAKVSFTGSVPTGKKVMEMSAK-TVKHVTL 262
Query: 181 ELGGKSPLLIFDDADLDTAADVALLGNLYNKGEICVASSRVFVQEGIYDKFEKKLLEKAK 240
ELGGKSPLLIF D +L+ A AL+ N +G++C +RVFVQ I +F ++++++ K
Sbjct: 263 ELGGKSPLLIFKDCELENAVRGALMANFLTQGQVCTNGTRVFVQREIMPQFLEEVVKRTK 322
Query: 241 AWLVGDPFDPTVRQGPQISERHFDRILSYIEHGKREGATLLTGGKPIG------DKGYYI 294
A +VGDP R G IS+ D++L ++ K+EGA +L GG+P+ GY++
Sbjct: 323 AIVVGDPLLTETRMGGLISKPQLDKVLGFVAQAKKEGARVLCGGEPLTPSDPKLKNGYFM 382
Query: 295 EPTIFTNVKEDMIIAKEEIFGPVMALMKFKTVEEAIKSANNTQYGLAAGIVTKDLNVANT 354
P + N ++DM KEEIFGPVM+++ F T EE ++ ANNT +GLA+G+ T+D++ A+
Sbjct: 383 SPCVLDNCRDDMTCVKEEIFGPVMSVLPFDTEEEVLQRANNTTFGLASGVFTRDISRAHR 442
Query: 355 VSRSIRAGIIWINCYFGFSMDCPYGGYKMSGFGREYGLESLYKYLQIKSVVTPI--YNSP 412
V+ ++ AG +IN Y ++ P+GGYKMSGFGRE G ++ Y Q+K+V+ + +S
Sbjct: 443 VAANLEAGTCYINTYSISPVEVPFGGYKMSGFGRENGQATVDYYSQLKTVIVEMGDVDSL 502
Query: 413 W 413
+
Sbjct: 503 F 503
|
| >d1wnda_ c.82.1.1 (A:) Putative betaine aldehyde dehydrogenase YdcW {Escherichia coli [TaxId: 562]} Length = 474 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: Putative betaine aldehyde dehydrogenase YdcW species: Escherichia coli [TaxId: 562]
Score = 331 bits (850), Expect = e-111
Identities = 150/407 (36%), Positives = 230/407 (56%), Gaps = 4/407 (0%)
Query: 1 MWKFADLIEEHVEELAALDALDAGKVYLRAKTAEIPGAAEFLRFFAGAADKIHGEVLKMS 60
+ K AD+IEE+ + A L++ + GK A EIP + RFFAGAA ++G
Sbjct: 67 LLKLADVIEENGQVFAELESRNCGKPLHSAFNDEIPAIVDVFRFFAGAARCLNGLAAGEY 126
Query: 61 SE-LQGYTLREPVGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLTALYYAH 119
E R+P+GVV I PWN+P M K++PALAAG +++KP+E TPLTAL A
Sbjct: 127 LEGHTSMIRRDPLGVVASIAPWNYPLMMAAWKLAPALAAGNCVVLKPSEITPLTALKLAE 186
Query: 120 LAKLAGIPDGVLNVVPGFGPTAGAAICSHMDIDYVCFTGSTDVGRLVMQAAAASNLKQVS 179
LAK P GV+N++ G G T G + H + V TGS G ++ A+ ++K+
Sbjct: 187 LAK-DIFPAGVVNILFGRGKTVGDPLTGHPKVRMVSLTGSIATGEHIISHTAS-SIKRTH 244
Query: 180 LELGGKSPLLIFDDADLDTAADVALLGNLYNKGEICVASSRVFVQEGIYDKFEKKLLEKA 239
+ELGGK+P+++FDDAD++ + YN G+ C A+ R++ Q+GIYD +KL
Sbjct: 245 MELGGKAPVIVFDDADIEAVVEGVRTFGYYNAGQDCTAACRIYAQKGIYDTLVEKLGAAV 304
Query: 240 KAWLVGDPFDPTVRQGPQISERHFDRILSYIEHGKREGAT-LLTGGKPIGDKGYYIEPTI 298
G P D + GP S H +R+ +E K G ++TGG+ GYY PT+
Sbjct: 305 ATLKSGAPDDESTELGPLSSLAHLERVGKAVEEAKATGHIKVITGGEKRKGNGYYYAPTL 364
Query: 299 FTNVKEDMIIAKEEIFGPVMALMKFKTVEEAIKSANNTQYGLAAGIVTKDLNVANTVSRS 358
+D I ++E+FGPV+++ F E+ + AN++QYGLA+ + TKD+ A+ VS
Sbjct: 365 LAGALQDDAIVQKEVFGPVVSVTPFDNEEQVVNWANDSQYGLASSVWTKDVGRAHRVSAR 424
Query: 359 IRAGIIWINCYFGFSMDCPYGGYKMSGFGREYGLESLYKYLQIKSVV 405
++ G W+N +F + P+GG K+SG+G++ L L Y ++ V+
Sbjct: 425 LQYGCTWVNTHFMLVSEMPHGGQKLSGYGKDMSLYGLEDYTVVRHVM 471
|
| >d1uzba_ c.82.1.1 (A:) 1-pyrroline-5-carboxylate dehydrogenase {Thermus thermophilus [TaxId: 274]} Length = 516 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: 1-pyrroline-5-carboxylate dehydrogenase species: Thermus thermophilus [TaxId: 274]
Score = 287 bits (736), Expect = 3e-93
Identities = 132/414 (31%), Positives = 219/414 (52%), Gaps = 13/414 (3%)
Query: 1 MWKFADLIEEHVEELAALDALDAGKVYLRAKTAEIPGAAEFLRFFAGAAD--KIHGEVLK 58
+ K A L+ EL A + GK + +A++ A +F+ ++A AA + +
Sbjct: 102 LLKAAALMRRRKRELEATLVYEVGKNW-VEASADVAEAIDFIEYYARAALRYRYPAVEVV 160
Query: 59 MSSELQGYTLREPVGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLTALYYA 118
+ P+G I PWNFP +F + +A G T+I KPAE +
Sbjct: 161 PYPGEDNESFYVPLGAGVVIAPWNFPVAIFTGMIVGPVAVGNTVIAKPAEDAVVVGAKVF 220
Query: 119 HLAKLAGIPDGVLNVVPGFGPTAGAAICSHMDIDYVCFTGSTDVGRLVMQAAA-----AS 173
+ AG P GV+N +PG G GA + H I ++ FTGS +VG + +AA +
Sbjct: 221 EIFHEAGFPPGVVNFLPGVGEEVGAYLVEHPRIRFINFTGSLEVGLKIYEAAGRLAPGQT 280
Query: 174 NLKQVSLELGGKSPLLIFDDADLDTAADVALLGNLYNKGEICVASSRVFVQEGIYDKFEK 233
K+ +E GGK+ +++ + AD D AA+ ++ +G+ C A+SR+ + +G Y+ +
Sbjct: 281 WFKRAYVETGGKNAIIVDETADFDLAAEGVVVSAYGFQGQKCSAASRLILTQGAYEPVLE 340
Query: 234 KLLEKAKAWLVGDPFDPTVRQGPQISERHFDRILSYIEHGKREGATLLTGGKPIGDKGYY 293
++L++A+ VG P + GP +S ++LSYIE GK EG +L GGK + +GY+
Sbjct: 341 RVLKRAERLSVG-PAEENPDLGPVVSAEQERKVLSYIEIGKNEGQLVL-GGKRLEGEGYF 398
Query: 294 IEPTIFTNVKEDMIIAKEEIFGPVMALMKFKTVEEAIKSANNTQYGLAAGIVTKDLNVAN 353
I PT+FT V IA+EEIFGPV+++++ K EA++ AN+T YGL G+ ++
Sbjct: 399 IAPTVFTEVPPKARIAQEEIFGPVLSVIRVKDFAEALEVANDTPYGLTGGVYSRKREHLE 458
Query: 354 TVSRSIRAGIIWINCYFGFSMDC--PYGGYKMSGFGREYG-LESLYKYLQIKSV 404
R G ++ N ++ P+GG+K+SG + G L+ L +L++K+V
Sbjct: 459 WARREFHVGNLYFNRKITGALVGVQPFGGFKLSGTNAKTGALDYLRLFLEMKAV 512
|
| >d1euha_ c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), ALDH {Streptococcus mutans [TaxId: 1309]} Length = 474 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: Aldehyde reductase (dehydrogenase), ALDH species: Streptococcus mutans [TaxId: 1309]
Score = 279 bits (714), Expect = 2e-90
Identities = 130/411 (31%), Positives = 197/411 (47%), Gaps = 13/411 (3%)
Query: 1 MWKFADLIEEHVEELAALDALDAGKVYLRAKTAEIPGAAEFLRFFAGAA-----DKIHGE 55
+ K AD++ E++ A+ + + K Y A + + A G
Sbjct: 67 LHKVADILMRDKEKIGAILSKEVAKGYKSAVSEVVRTAEIINYAAEEGLRMEGEVLEGGS 126
Query: 56 VLKMSSELQGYTLREPVGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLTAL 115
S + REPVG+V I P+N+P + K++PAL AG + KP Q ++ L
Sbjct: 127 FEAASKKKIAVVRREPVGLVLAISPFNYPVNLAGSKIAPALIAGNVIAFKPPTQGSISGL 186
Query: 116 YYAHLAKLAGIPDGVLNVVPGFGPTAGAAICSHMDIDYVCFTGSTDVGRLVMQAAAASNL 175
A AG+P GV N + G G G I H ++++ FTGST +G + + A +
Sbjct: 187 LLAEAFAEAGLPAGVFNTITGRGSEIGDYIVEHQAVNFINFTGSTGIGERIGKMAG---M 243
Query: 176 KQVSLELGGKSPLLIFDDADLDTAADVALLGNLYNKGEICVASSRVFVQEGIYDKFEKKL 235
+ + LELGGK ++ +DADL+ A + G G+ C A RV V E + D+ +K+
Sbjct: 244 RPIMLELGGKDSAIVLEDADLELTAKNIIAGAFGYSGQRCTAVKRVLVMESVADELVEKI 303
Query: 236 LEKAKAWLVGDPFDPTVRQGPQISERHFDRILSYIEHGKREGATLLTGGKPIGDKGYYIE 295
EK A +G+P D P I + D + I +GAT LT K +G I
Sbjct: 304 REKVLALTIGNPEDDADIT-PLIDTKSADYVEGLINDANDKGATALTEIK---REGNLIC 359
Query: 296 PTIFTNVKEDMIIAKEEIFGPVMALMKFKTVEEAIKSANNTQYGLAAGIVTKDLNVANTV 355
P +F V DM +A EE FGPV+ +++ +VEEAI+ +N ++YGL A I T D A +
Sbjct: 360 PILFDKVTTDMRLAWEEPFGPVLPIIRVTSVEEAIEISNKSEYGLQASIFTNDFPRAFGI 419
Query: 356 SRSIRAGIIWINCYFGFSMD-CPYGGYKMSGFGREYGLESLYKYLQIKSVV 405
+ + G + IN D P+ G K SG G + S+ +KSVV
Sbjct: 420 AEQLEVGTVHINNKTQRGTDNFPFLGAKKSGAGIQGVKYSIEAMTTVKSVV 470
|
| >d1ad3a_ c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), ALDH {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 446 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: Aldehyde reductase (dehydrogenase), ALDH species: Rat (Rattus norvegicus) [TaxId: 10116]
Score = 268 bits (686), Expect = 1e-86
Identities = 115/411 (27%), Positives = 183/411 (44%), Gaps = 17/411 (4%)
Query: 1 MWKFADLIEEHVEELAALDALDAGKVYLRAKTAEIPGAAEFLRFFAGA----ADKIHGEV 56
+ +I E+++ ++ A D GK + E+ E L A+
Sbjct: 28 LEALQRMINENLKSISGALASDLGKNEWTSYYEEVAHVLEELDTTIKELPDWAEDEPVAK 87
Query: 57 LKMSSELQGYTLREPVGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLTALY 116
+ + + Y EP+GVV I WN+P + + A+AAG +I+KP+E + A
Sbjct: 88 TRQTQQDDLYIHSEPLGVVLVIGAWNYPFNLTIQPMVGAVAAGNAVILKPSEVSGHMADL 147
Query: 117 YAHLAKLAGIPDGVLNVVPGFGPTAGAAICSHMDIDYVCFTGSTDVGRLVMQAAAASNLK 176
A L D L +V G + D++ +TGST VG++VM AAA +L
Sbjct: 148 LATLIP--QYMDQNLYLVVKGGVPETTELLKERF-DHIMYTGSTAVGKIVMAAAA-KHLT 203
Query: 177 QVSLELGGKSPLLIFDDADLDTAADVALLGNLYNKGEICVASSRVFVQEGIYDKFEKKLL 236
V+LELGGKSP + D DLD A G N G+ CVA + I ++ +KL
Sbjct: 204 PVTLELGGKSPCYVDKDCDLDVACRRIAWGKFMNSGQTCVAPDYILCDPSIQNQIVEKLK 263
Query: 237 EKAKAWLVGDPFDPTVRQGPQISERHFDRILSYIEHGKREGATLLTGGKPIGDKGYYIEP 296
+ K G+ + G I++RHF R+ I++ K + G YI P
Sbjct: 264 KSLK-DFYGEDAKQSRDYGRIINDRHFQRVKGLIDNQK------VAHGGTWDQSSRYIAP 316
Query: 297 TIFTNVKEDMIIAKEEIFGPVMALMKFKTVEEAIKSANNTQYGLAAGIVTKDLNVANTVS 356
TI +V + +EEIFGPVM ++ +++EEAI+ N + LA + + + V +
Sbjct: 317 TILVDVDPQSPVMQEEIFGPVMPIVCVRSLEEAIQFINQREKPLALYVFSNNEKVIKKMI 376
Query: 357 RSIRAGIIWIN--CYFGFSMDCPYGGYKMSGFGREYGLESLYKYLQIKSVV 405
+G + N P+GG SG G +G +S + +S +
Sbjct: 377 AETSSGGVTANDVIVHITVPTLPFGGVGNSGMGAYHGKKSFETFSHRRSCL 427
|
| >d1ky8a_ c.82.1.1 (A:) Non-phosphorylating glyceraldehyde-3-phosphate dehydrogenase GapN {Archaeon Thermoproteus tenax [TaxId: 2271]} Length = 499 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: Non-phosphorylating glyceraldehyde-3-phosphate dehydrogenase GapN species: Archaeon Thermoproteus tenax [TaxId: 2271]
Score = 246 bits (627), Expect = 3e-77
Identities = 125/412 (30%), Positives = 200/412 (48%), Gaps = 12/412 (2%)
Query: 1 MWKFADLIEEHVEELAALDALDAGKVYLRAKTAEIPGAAEFLRFFAGAADKIHGEVLKM- 59
+ K AD+IE +++ A + ++AGK A E+ A + LR KI G+ +
Sbjct: 81 LRKAADIIERNLDVFAEVLVMNAGKPKSAAV-GEVKAAVDRLRLAELDLKKIGGDYIPGD 139
Query: 60 ----SSELQGYTLREPVGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLTAL 115
+ E +G REP+GVV I P+N+P K++ + G ++VKP+ PL A
Sbjct: 140 WTYDTLETEGLVRREPLGVVAAITPFNYPLFDAVNKITYSFIYGNAVVVKPSISDPLPAA 199
Query: 116 YYAHLAKLAGIPDGVLNVVPGFGPTAGAAICSHMDIDYVCFTGSTDVGRLVMQAAAASNL 175
AG P + ++ G A + + V FTGST+VG V++ +
Sbjct: 200 MAVKALLDAGFPPDAIALLNLPGKEAEKIVA-DDRVAAVSFTGSTEVGERVVKVGG---V 255
Query: 176 KQVSLELGGKSPLLIFDDADLDTAADVALLGNLYNKGEICVASSRVFVQEGIYDKFEKKL 235
KQ +ELGG P ++ +DADLD AAD G G+ C A V + +Y K +++
Sbjct: 256 KQYVMELGGGDPAIVLEDADLDLAADKIARGIYSYAGQRCDAIKLVLAERPVYGKLVEEV 315
Query: 236 LEKAKAWLVGDPFDPTVRQGPQISERHFDRILSYIEHGKREGATLLTGGKPIGDKGYYIE 295
++ + VGDP DPTV GP IS D +++ IE +G +L GG+ +G
Sbjct: 316 AKRLSSLRVGDPRDPTVDVGPLISPSAVDEMMAAIEDAVEKGGRVLAGGRRLGPTYVQPT 375
Query: 296 P-TIFTNVKEDMIIAKEEIFGPVMALMKFKTVEEAIKSANNTQYGLAAGIVTKDLNVANT 354
+ +DM++ K E+F PV + ++ K +++AI+ AN YGL A + +D+
Sbjct: 376 LVEAPADRVKDMVLYKREVFAPVASAVEVKDLDQAIELANGRPYGLDAAVFGRDVVKIRR 435
Query: 355 VSRSIRAGIIWINCYFGFSMD-CPYGGYKMSGFGREYGLESLYKYLQIKSVV 405
R + G I+IN + P+GG K SG RE ++ K++V
Sbjct: 436 AVRLLEVGAIYINDMPRHGIGYYPFGGRKKSGVFREGIGYAVEAVTAYKTIV 487
|
| >d1o20a_ c.82.1.1 (A:) Gamma-glutamyl phosphate reductase {Thermotoga maritima [TaxId: 2336]} Length = 414 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: Gamma-glutamyl phosphate reductase species: Thermotoga maritima [TaxId: 2336]
Score = 158 bits (400), Expect = 6e-45
Identities = 58/421 (13%), Positives = 118/421 (28%), Gaps = 59/421 (14%)
Query: 1 MWKFADLIEEHVEELAALDALDAGKVY-----------LRAKTAEIPGAAEFLRFFAGAA 49
+ K A+ ++E +E+ + +D K L I + G
Sbjct: 29 IKKIAEKLDERRKEILEANRIDVEKARERGVKESLVDRLALNDKRIDEMIKACETVIGLK 88
Query: 50 DKIHGEVLKMSSELQGYTLREPVGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQ 109
D + + E R V + I + + AL +G T++++
Sbjct: 89 DPVGEVIDSWVREDGLRIARVRVPIGPIGIIYESRPNVTVETTILALKSGNTILLRGGSD 148
Query: 110 TPLTALYYAHLAKLAGIPDGVLNVVPGF-GPTAGAAICSHMDIDYVCFTGSTDVGRLVMQ 168
+ + A + F T + + + + G ++
Sbjct: 149 ALNSNKAIVSAIREALKETEIPESSVEFIENTDRSLVLEMIRLREYLSLVIPRGGYGLIS 208
Query: 169 AAAASNLKQVSLELGGKSPLLIFDDADLDTAADVALLGNLYNKGEICVASSRVFVQEGIY 228
+ V G + + + ADL A V + G A + ++ I
Sbjct: 209 FVRDNATVPVLETGVGNCHIFVDESADLKKAVPVIINAKTQRPGTCNAAEKLLVHEK-IA 267
Query: 229 DKFEKKLLEKAKAWLVGDPFDPTVRQGPQISERHFDRILSYIEHGKREGATLLTGGKPIG 288
+F ++E+ + V R+ +
Sbjct: 268 KEFLPVIVEELRKHGVEVRGCEKTREIVPDVVPATEDDWP-------------------- 307
Query: 289 DKGYYIEPTIFTNVKEDMIIAKEEIFGPVMALMKFKTVEEAIKSANNTQYGLAAGIVTKD 348
E ++A+ K V+EAI+ G + I+T++
Sbjct: 308 ----------------------TEYLDLIIAIKVVKNVDEAIEHIKKYSTGHSESILTEN 345
Query: 349 LNVANTVSRSIRAGIIWINCYFGFSMDCPYGGYKMSGFGRE----YGLESLYKYLQIKSV 404
+ A I A +++N F+ +G G + G L + K V
Sbjct: 346 YSNAKKFVSEIDAAAVYVNASTRFTDGGQFGFGAEIGISTQRFHARGPVGLRELTTYKFV 405
Query: 405 V 405
V
Sbjct: 406 V 406
|
| >d1ez0a_ c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), ALDH {Vibrio harveyi [TaxId: 669]} Length = 504 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: Aldehyde reductase (dehydrogenase), ALDH species: Vibrio harveyi [TaxId: 669]
Score = 143 bits (361), Expect = 9e-39
Identities = 77/429 (17%), Positives = 132/429 (30%), Gaps = 40/429 (9%)
Query: 1 MWKFADLIEEHVEELAALDALDAGKVYLRAKTAEIPGAAEFLRFFAGAADKIHGEVLKMS 60
+ A +E +++ A L+ +R EI A LR FA + +
Sbjct: 54 LRTIASELEARSDDIIARAHLETALPEVRLT-GEIARTANQLRLFADVVNSGSYHQAILD 112
Query: 61 S---------ELQGYTLREPVGVVGHIIPWNFPTT--MFFMKVSPALAAGCTMIVKPAEQ 109
+ + + +G V NFP + ALAAGC +IVK
Sbjct: 113 TPNPTRAPLPKPDIRRQQIALGPVAVFGASNFPLAFSAAGGDTASALAAGCPVIVKGHTA 172
Query: 110 TPLT----ALYYAHLAKLAGIPDGVLNVVPGFGPTAGAAICSHMDIDYVCFTGSTDVGRL 165
P T A K +P + ++ G G A+ SH +I V FTGS GR
Sbjct: 173 HPGTSQIVAECIEQALKQEQLPQAIFTLLQGNQRALGQALVSHPEIKAVGFTGSVGGGRA 232
Query: 166 VMQAAAASNLKQVSLELGGKSPLLIFDDADLDTAADVAL---LGNLYNKGEICVASSRVF 222
+ A G + + AD+A G+ C VF
Sbjct: 233 LFNLAHERPEPIPFYGELGAINPTFIFPSAMRAKADLADQFVASMTMGCGQFCTKPGVVF 292
Query: 223 VQEGIYDKFEKKLLEKAKAWLVGDPFDPTVRQGPQISERHFDRILSYIEHGKREGATLLT 282
+ + + + S+ I+
Sbjct: 293 ALNTPETQAFIETAQSLIRQQSPSTLLTPGIRDSYQSQVVSRGSDDGIDVTFS------- 345
Query: 283 GGKPIGDKGYYIEPTIFTNVKEDMIIAKEEIFGPVMALMKFKTVEEAIKSANNTQYGLAA 342
+ + +EEIFGP ++ + V + + + L A
Sbjct: 346 --QAESPCVASALFVTSSENWRKHPAWEEEIFGPQSLIVVCENVADMLSLSEMLAGSLTA 403
Query: 343 GIVT--KDLNVANTVSRSIR--AGIIWINCYF-----GFSMDC--PYGGYKMSGFGREYG 391
I +D + + + AG + N + G++M PY S G
Sbjct: 404 TIHATEEDYPQVSQLIPRLEEIAGRLVFNGWPTGVEVGYAMVHGGPYPASTHSA-STSVG 462
Query: 392 LESLYKYLQ 400
E+++++L+
Sbjct: 463 AEAIHRWLR 471
|
| >d1vlua_ c.82.1.1 (A:) Gamma-glutamyl phosphate reductase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 436 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: Gamma-glutamyl phosphate reductase species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 89.9 bits (222), Expect = 3e-20
Identities = 51/409 (12%), Positives = 120/409 (29%), Gaps = 57/409 (13%)
Query: 3 KFADLIEEHVEELAALDALD-----------AGKVYLRAKTAE-IPGAAEFLRFFAGAAD 50
K D ++ + + + +D + L + + ++ A D
Sbjct: 33 KIHDALKANAHAIEEANKIDLAVAKETGLADSLLKRLDLFKGDKFEVMLQGIKDVAELED 92
Query: 51 KIHGEVLKMSSELQGYTLRE-PVGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQ 109
+ G+V G TL + V ++ + + + ++ +G I+K ++
Sbjct: 93 PV-GKVKMARELDDGLTLYQVTAPVGVLLVIFESRPEVIANITALSIKSGNAAILKGGKE 151
Query: 110 TPLTALYYAHLAK------LAGIPDGVLNVVPGFGPTAGAAICSHMDIDYVCFTGSTDVG 163
+ T A + + V +V + + + +
Sbjct: 152 SVNTFREMAKIVNDTIAQFQSETGVPVGSVQLIETRQDVSDLLDQDEYIDLVVPRG---S 208
Query: 164 RLVMQAAAASNLKQVSLELGGKSPLLIFDDADLDTAADVALLGNLYNKGEICVASSRVFV 223
+++ + V G + + +DADL A ++L + +
Sbjct: 209 NALVRKIKDTTKIPVLGHADGICSIYLDEDADLIKAKRISLDAKTNYPAGCNAMETLLIN 268
Query: 224 QEGIYDKFEKKLLEKAKAWLVGDPFDPTVRQGPQISERHFDRILSYIEHGKREGATLLTG 283
+E + T+ + +FD++
Sbjct: 269 -PKFSKWWEVLENLTLEG-------GVTIHATKDLKTAYFDKL----------------- 303
Query: 284 GKPIGDKGYYIEPTIFTNVKEDMIIAKEEIFGPVMALMKFKTVEEAIKSANNTQYGLAAG 343
+ T+ + ++D +E +A + E AI+ N
Sbjct: 304 NELGKLTEAIQCKTVDADEEQDF---DKEFLSLDLAAKFVTSTESAIQHINTHSSRHTDA 360
Query: 344 IVTKDLNVANTVSRSIRAGIIWINCYFGFSMDCPYGGYKMSGFGREYGL 392
IVT++ A + + + ++ N F+ Y GFG E G+
Sbjct: 361 IVTENKANAEKFMKGVDSSGVYWNASTRFADGFRY------GFGAEVGI 403
|
Homologous Domains Detected by HHsearch
Original result of HHsearch against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 414 | |||
| d1bxsa_ | 494 | Aldehyde reductase (dehydrogenase), ALDH {Sheep (O | 100.0 | |
| d1o04a_ | 494 | Aldehyde reductase (dehydrogenase), ALDH {Human (H | 100.0 | |
| d1a4sa_ | 503 | Aldehyde reductase (dehydrogenase), ALDH {Baltic c | 100.0 | |
| d1wnda_ | 474 | Putative betaine aldehyde dehydrogenase YdcW {Esch | 100.0 | |
| d1uzba_ | 516 | 1-pyrroline-5-carboxylate dehydrogenase {Thermus t | 100.0 | |
| d1ky8a_ | 499 | Non-phosphorylating glyceraldehyde-3-phosphate deh | 100.0 | |
| d1ad3a_ | 446 | Aldehyde reductase (dehydrogenase), ALDH {Rat (Rat | 100.0 | |
| d1euha_ | 474 | Aldehyde reductase (dehydrogenase), ALDH {Streptoc | 100.0 | |
| d1ez0a_ | 504 | Aldehyde reductase (dehydrogenase), ALDH {Vibrio h | 100.0 | |
| d1o20a_ | 414 | Gamma-glutamyl phosphate reductase {Thermotoga mar | 100.0 | |
| d1vlua_ | 436 | Gamma-glutamyl phosphate reductase {Baker's yeast | 100.0 | |
| d1k75a_ | 431 | L-histidinol dehydrogenase HisD {Escherichia coli | 97.78 |
| >d1bxsa_ c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), ALDH {Sheep (Ovis aries) [TaxId: 9940]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: Aldehyde reductase (dehydrogenase), ALDH species: Sheep (Ovis aries) [TaxId: 9940]
Probab=100.00 E-value=1.8e-92 Score=719.84 Aligned_cols=410 Identities=53% Similarity=0.935 Sum_probs=394.4
Q ss_pred CHHHHHHHHHhHHHHHHHHHHhcCCChHHHhhchHHHHHHHHHHHHHhhhhhcCcccccCCCcccceeecCCceEEEEcC
Q 015042 1 MWKFADLIEEHVEELAALDALDAGKVYLRAKTAEIPGAAEFLRFFAGAADKIHGEVLKMSSELQGYTLREPVGVVGHIIP 80 (414)
Q Consensus 1 L~~~a~~l~~~~~~l~~~~~~etGk~~~e~~~~ei~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p 80 (414)
|+++++.|++|+++|++++++|+|||..+....|+..+++.+++++.+.++..+...+...+...+++++|+|||++|+|
T Consensus 82 L~kia~~L~~~~eela~l~~~E~Gk~~~e~~~~ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~P 161 (494)
T d1bxsa_ 82 LNKLADLIERDRLLLATMEAMNGGKLFSNAYLMDLGGCIKTLRYCAGWADKIQGRTIPMDGNFFTYTRSEPVGVCGQIIP 161 (494)
T ss_dssp HHHHHHHHHHTHHHHHHHHHHHHTCCHHHHHHTHHHHHHHHHHHHHHHGGGCCEEEECCSSSEEEEEEEEECCEEEEECC
T ss_pred HHHHHHHHHhCHHHHHHHHHHhcCCchhhhhhhhhhhhhHHHHHHhhhhhhhcceeecCCCCceeEEEEccEEEEEEEeC
Confidence 57899999999999999999999999998767799999999999999998877776666667788899999999999999
Q ss_pred CccchHHHHHhHHHHHhhCCeEEeecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhhHHHhhhCCCccEEEEeCCc
Q 015042 81 WNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLTALYYAHLAKLAGIPDGVLNVVPGFGPTAGAAICSHMDIDYVCFTGST 160 (414)
Q Consensus 81 ~n~P~~~~~~~~~~aLaaGN~vv~kps~~~~~~~~~l~~~l~~aG~p~g~v~~v~~~~~~~~~~l~~~~~v~~v~~tGs~ 160 (414)
||||+...++++++||++||+||+|||+.+|.++..+.+++.++|+|+|++|+|++++.++++.|+.||+||+|.||||.
T Consensus 162 wN~P~~~~~~~i~~ALaaGN~VVlKpse~tp~~a~~l~~~~~~aglP~gv~~~v~g~~~~~~~~l~~~p~v~~i~fTGS~ 241 (494)
T d1bxsa_ 162 WNFPLLMFLWKIGPALSCGNTVVVKPAEQTPLTALHMGSLIKEAGFPPGVVNIVPGYGPTAGAAISSHMDVDKVAFTGST 241 (494)
T ss_dssp SSSHHHHHHHHHHHHHHTTCEEEEECCTTCCHHHHHHHHHHHHHTCCTTSEEECCSCTTTHHHHHHTCTTCSEEEEESCH
T ss_pred ccchhHHHHHHHHHHHHcCCeEEEECCCCChHHHHHHHHHHHHhCCCcCeEEEEeCCchHHHHHHHhCCCcCEEEecCCH
Confidence 99999999999999999999999999999999999999999999999999999999888899999999999999999999
Q ss_pred HHHHHHHHHHHhcccceeEEEcCCCCCceEcCCCCHHHHHHHHHHHhhccCCCCcccCceEEEeCchHHHHHHHHHHHHh
Q 015042 161 DVGRLVMQAAAASNLKQVSLELGGKSPLLIFDDADLDTAADVALLGNLYNKGEICVASSRVFVQEGIYDKFEKKLLEKAK 240 (414)
Q Consensus 161 ~~g~~i~~~~a~~~~~~~~~e~gg~~~~iV~~dadl~~aa~~i~~~~~~~~Gq~C~a~~~i~V~~~i~d~f~~~l~~~~~ 240 (414)
.+|+.|++.++..+++|+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||++++|+|+++|+++++
T Consensus 242 ~~g~~i~~~aa~~~~~~~~lElGG~np~iV~~dadl~~a~~~i~~~~~~~~GQ~C~a~~rv~V~~~~~d~f~~~l~~~~~ 321 (494)
T d1bxsa_ 242 EVGKLIKEAAGKSNLKRVSLELGGKSPCIVFADADLDNAVEFAHQGVFYHQGQCCIAASRLFVEESIYDEFVRRSVERAK 321 (494)
T ss_dssp HHHHHHHHHHHHTTCCEEEEECCCCCEEEECTTSCHHHHHHHHHHHHHTTTTCCTTCCCEEEEEHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHhcccCCCeEEEEcCCcCcEEECcCcchhHhHHHHHHHHhcCCCcccccceEEecccchhHHHHHHHHhhhh
Confidence 99999999887457899999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hcccCCCCCCCCcccccCCHHHHHHHHHHHHHHHHcCCEEEeCCcccCCCCceeeeEEEeeCCCcccccccceecceEEE
Q 015042 241 AWLVGDPFDPTVRQGPQISERHFDRILSYIEHGKREGATLLTGGKPIGDKGYYIEPTIFTNVKEDMIIAKEEIFGPVMAL 320 (414)
Q Consensus 241 ~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v 320 (414)
++++|+|.++++++||+++..+++++++++++++++|+++++||....+.|+|++|||+.++++++.+++||+||||++|
T Consensus 322 ~~~~g~~~~~~~~~gpli~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~FGPvl~v 401 (494)
T d1bxsa_ 322 KYVLGNPLTPGVSQGPQIDKEQYEKILDLIESGKKEGAKLECGGGPWGNKGYFIQPTVFSDVTDDMRIAKEEIFGPVQQI 401 (494)
T ss_dssp CCCBSCTTSTTCCBCCCSCHHHHHHHHHHHHHHHHTTCEECSCCSEECSSSCEECCEEEESCCTTSHHHHSCCCSSEEEE
T ss_pred heeeeccCCCCCcCCCcCCHHHHHHHHHHHHHHHHcCCEEEeCCCccCCCceeEcCEEEeCCCCCcHHHhccccCceEEE
Confidence 99999999999999999999999999999999999999999999887778999999999999999999999999999999
Q ss_pred EeeCCHHHHHHHhhcCCCCceEEEecCCHHHHHHHHHhcceeEEEEcCcCCCCCCCCcccCCCCCCCccchHHHHHhhhe
Q 015042 321 MKFKTVEEAIKSANNTQYGLAAGIVTKDLNVANTVSRSIRAGIIWINCYFGFSMDCPYGGYKMSGFGREYGLESLYKYLQ 400 (414)
Q Consensus 321 ~~~~~~~eai~~~n~~~~gl~~sv~s~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~p~gG~~~sG~g~~~g~~~~~~~~~ 400 (414)
++|+|.+|||+++|+++|||++||||+|.+.++++++++++|+|+||++....+.+||||+|.||+|+++|.+|+++||+
T Consensus 402 ~~~~~~~eai~~~n~~~~gL~a~i~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~PfGG~~~SG~G~~~g~~~~~~ft~ 481 (494)
T d1bxsa_ 402 MKFKSLDDVIKRANNTFYGLSAGIFTNDIDKAITVSSALQSGTVWVNCYSVVSAQCPFGGFKMSGNGRELGEYGFHEYTE 481 (494)
T ss_dssp EEECCHHHHHHHHHCSSCCSEEEEECSBHHHHHHHHHHSCCSEEEESCCCCCCTTSCBCCSGGGEESCBSHHHHHHTTEE
T ss_pred EEECCHHHHHHHHhCCCCCCeEEEEeCCHHHHHHHHHhCCEeEEEEcCCCCcCCCCCcCccccccCChhhHHHHHHHhcc
Confidence 99999999999999999999999999999999999999999999999988888899999999999999999999999999
Q ss_pred eeEEEeeCCC
Q 015042 401 IKSVVTPIYN 410 (414)
Q Consensus 401 ~k~i~~~~~~ 410 (414)
.|+|++++.+
T Consensus 482 ~k~i~~~~~~ 491 (494)
T d1bxsa_ 482 VKTVTIKISQ 491 (494)
T ss_dssp EEEEEEECSC
T ss_pred eEEEEEecCC
Confidence 9999999764
|
| >d1o04a_ c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), ALDH {Human (Homo sapiens), mitochondrial [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: Aldehyde reductase (dehydrogenase), ALDH species: Human (Homo sapiens), mitochondrial [TaxId: 9606]
Probab=100.00 E-value=1.8e-91 Score=712.11 Aligned_cols=410 Identities=52% Similarity=0.887 Sum_probs=394.2
Q ss_pred CHHHHHHHHHhHHHHHHHHHHhcCCChHHHhhchHHHHHHHHHHHHHhhhhhcCcccccCCCcccceeecCCceEEEEcC
Q 015042 1 MWKFADLIEEHVEELAALDALDAGKVYLRAKTAEIPGAAEFLRFFAGAADKIHGEVLKMSSELQGYTLREPVGVVGHIIP 80 (414)
Q Consensus 1 L~~~a~~l~~~~~~l~~~~~~etGk~~~e~~~~ei~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p 80 (414)
|+++++.|++|+++|++++++|+|||..++...|+..+++.+++++.+..+..++..+...+...+++++|+|||++|+|
T Consensus 82 L~~~a~~l~~~~eela~~~~~E~GK~~~ea~~~ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~P 161 (494)
T d1o04a_ 82 LNRLADLIERDRTYLAALETLDNGKPYVISYLVDLDMVLKCLRYYAGWADKYHGKTIPIDGDFFSYTRHEPVGVCGQIIP 161 (494)
T ss_dssp HHHHHHHHHHTHHHHHHHHHHHHCCCHHHHHHTHHHHHHHHHHHHHHHTTTCCEEEECCSSSEEEEEEEEECCEEEEECC
T ss_pred HHHHHHHHHHhHHHHHHHHHHHhCcchhhhhhhHHHHHHHHHHHHHHHHHHhcCceeccCCCceeEEEEecccEEEEECC
Confidence 57899999999999999999999999998767799999999999999998877776666666778899999999999999
Q ss_pred CccchHHHHHhHHHHHhhCCeEEeecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhhHHHhhhCCCccEEEEeCCc
Q 015042 81 WNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLTALYYAHLAKLAGIPDGVLNVVPGFGPTAGAAICSHMDIDYVCFTGST 160 (414)
Q Consensus 81 ~n~P~~~~~~~~~~aLaaGN~vv~kps~~~~~~~~~l~~~l~~aG~p~g~v~~v~~~~~~~~~~l~~~~~v~~v~~tGs~ 160 (414)
||||+...++++++||++||+||+|||+.+|.++..+.+++.++|+|+|++|++++++.++++.|+.||+|++|.||||.
T Consensus 162 ~N~P~~~~~~~~~~ALaaGN~VVlKps~~~p~~~~~l~~l~~~aglP~gv~~~v~g~~~~~g~~L~~~~~v~~v~fTGS~ 241 (494)
T d1o04a_ 162 WNFPLLMQAWKLGPALATGNVVVMKVAEQTPLTALYVANLIKEAGFPPGVVNIVPGFGPTAGAAIASHEDVDKVAFTGST 241 (494)
T ss_dssp SSSHHHHHHHHHHHHHHTTCEEEEECCTTSCHHHHHHHHHHHHHTCCTTSEEECCBCTTTHHHHHHTCTTCCEEEEESCH
T ss_pred cccHHHHHHHHHHHHHHcCCeEEEeCCCCCcHHHHHHHHHHHHhCcCcCeEEEEeCCChHHHHHHhhCCCcCEEEEeCCH
Confidence 99999999999999999999999999999999999999999999999999999999888899999999999999999999
Q ss_pred HHHHHHHHHHHhcccceeEEEcCCCCCceEcCCCCHHHHHHHHHHHhhccCCCCcccCceEEEeCchHHHHHHHHHHHHh
Q 015042 161 DVGRLVMQAAAASNLKQVSLELGGKSPLLIFDDADLDTAADVALLGNLYNKGEICVASSRVFVQEGIYDKFEKKLLEKAK 240 (414)
Q Consensus 161 ~~g~~i~~~~a~~~~~~~~~e~gg~~~~iV~~dadl~~aa~~i~~~~~~~~Gq~C~a~~~i~V~~~i~d~f~~~l~~~~~ 240 (414)
.+|+.|++.++.++++|+++|+||+||+||++|||++.|++.+++++|.++||.|++++++|||++++|+|++.|+++++
T Consensus 242 ~~g~~i~~~aa~~~~~~~~lElGG~~p~iV~~dAdl~~a~~~i~~~~~~~~GQ~C~a~~~v~v~~~i~d~f~~~l~~~~~ 321 (494)
T d1o04a_ 242 EIGRVIQVAAGSSNLKRVTLELGGKSPNIIMSDADMDWAVEQAHFALFFNQGQCSCAGSRTFVQEDIYDEFVERSVARAK 321 (494)
T ss_dssp HHHHHHHHHHHHTTCCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCCTTCEEEEEEEHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhhccCCCeEEEECCCcCcEEEccCccHHHHHHhhhhhccccCcccccccccccccchhhHHHHHHHHHHhh
Confidence 99999998876578999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hcccCCCCCCCCcccccCCHHHHHHHHHHHHHHHHcCCEEEeCCcccCCCCceeeeEEEeeCCCcccccccceecceEEE
Q 015042 241 AWLVGDPFDPTVRQGPQISERHFDRILSYIEHGKREGATLLTGGKPIGDKGYYIEPTIFTNVKEDMIIAKEEIFGPVMAL 320 (414)
Q Consensus 241 ~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v 320 (414)
++++|+|.++++++||++++.+++++++++++++++|+++++||....+.|+|++|||+.++++++.+++||+||||++|
T Consensus 322 ~~~~g~p~~~~~~~gpli~~~~~~~~~~~i~~a~~~Ga~vl~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~FGPvl~v 401 (494)
T d1o04a_ 322 SRVVGNPFDSKTEQGPQVDETQFKKILGYINTGKQEGAKLLCGGGIAADRGYFIQPTVFGDVQDGMTIAKEEIFGPVMQI 401 (494)
T ss_dssp HCCBCCTTSTTCSBCCCSSHHHHHHHHHHHHHHHHTTCEEEECCSBCCSSSSCBCCEEEESCCTTSHHHHSCCCSSEEEE
T ss_pred heeecCcccccCccCCCCCHHHHHHHHHHHHHHHHCCCEEEECCCcCCCCCceEcCEEEeCCCCCCHHHhccccCceEEE
Confidence 99999999999999999999999999999999999999999999887778999999999999999999999999999999
Q ss_pred EeeCCHHHHHHHhhcCCCCceEEEecCCHHHHHHHHHhcceeEEEEcCcCCCCCCCCcccCCCCCCCccchHHHHHhhhe
Q 015042 321 MKFKTVEEAIKSANNTQYGLAAGIVTKDLNVANTVSRSIRAGIIWINCYFGFSMDCPYGGYKMSGFGREYGLESLYKYLQ 400 (414)
Q Consensus 321 ~~~~~~~eai~~~n~~~~gl~~sv~s~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~p~gG~~~sG~g~~~g~~~~~~~~~ 400 (414)
++|+|++|||+++|+++|||++||||+|.+.++++++++++|+|+||+++...+.+||||+|.||+|+++|.+|+++||+
T Consensus 402 ~~~~~~~eai~~an~~~~gL~a~i~s~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~PfGG~~~SG~G~~~g~~~~~~ft~ 481 (494)
T d1o04a_ 402 LKFKTIEEVVGRANNSTYGLAAAVFTKDLDKANYLSQALQAGTVWVNCYDVFGAQSPFGGYKMSGSGRELGEYGLQAYTE 481 (494)
T ss_dssp EEECCHHHHHHHHHCSSCCSEEEEECSBHHHHHHHHHHCCSSEEEESCSSCCCTTSCBCCSGGGEESCBSTGGGGGGGEE
T ss_pred EEeCCHHHHHHHHhCCCCCCeEEEEeCCHHHHHHHHHhCCeeEEEEcCCCCCCCCCCcCCcccccCCchhHHHHHHHhcC
Confidence 99999999999999999999999999999999999999999999999988888889999999999999999999999999
Q ss_pred eeEEEeeCCC
Q 015042 401 IKSVVTPIYN 410 (414)
Q Consensus 401 ~k~i~~~~~~ 410 (414)
+|+|+++++.
T Consensus 482 ~k~v~~~~p~ 491 (494)
T d1o04a_ 482 VKTVTVKVPQ 491 (494)
T ss_dssp EEEEEEECSC
T ss_pred eEEEEEeCCC
Confidence 9999998764
|
| >d1a4sa_ c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), ALDH {Baltic cod (Gadus callarias) [TaxId: 8053]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: Aldehyde reductase (dehydrogenase), ALDH species: Baltic cod (Gadus callarias) [TaxId: 8053]
Probab=100.00 E-value=2.1e-89 Score=697.35 Aligned_cols=411 Identities=39% Similarity=0.737 Sum_probs=392.6
Q ss_pred CHHHHHHHHHhHHHHHHHHHHhcCCChHHHhhchHHHHHHHHHHHHHhhhhhcCcccccCCCcccceeecCCceEEEEcC
Q 015042 1 MWKFADLIEEHVEELAALDALDAGKVYLRAKTAEIPGAAEFLRFFAGAADKIHGEVLKMSSELQGYTLREPVGVVGHIIP 80 (414)
Q Consensus 1 L~~~a~~l~~~~~~l~~~~~~etGk~~~e~~~~ei~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p 80 (414)
|+++++.|++|+++|++++++|+|||..++ ..|+..+++.+++++.+.++..+.....+.+...+.+++|+|||++|+|
T Consensus 86 L~~~a~~L~~~~eela~~~~~etGkp~~ea-~~ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p 164 (503)
T d1a4sa_ 86 MLEAARIIRERRDNIAKLEVINNGKTITEA-EYDIDAAWQCIEYYAGLAPTLSGQHIQLPGGAFAYTRREPLGVCAGILA 164 (503)
T ss_dssp HHHHHHHHHHTHHHHHHHHHHHHCCCHHHH-HHHHHHHHHHHHHHHHHGGGCCEEEEECGGGCEEEEEEEECSEEEEECC
T ss_pred HHHHHHHHHHhHHHHHHHHHHhhhhcchhh-hhhhhhhhhcccccccccccccccccccCCCcccccccccceeeecccC
Confidence 578999999999999999999999999975 5699999999999999988776665555566778999999999999999
Q ss_pred CccchHHHHHhHHHHHhhCCeEEeecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhhHHHhhhCCCccEEEEeCCc
Q 015042 81 WNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLTALYYAHLAKLAGIPDGVLNVVPGFGPTAGAAICSHMDIDYVCFTGST 160 (414)
Q Consensus 81 ~n~P~~~~~~~~~~aLaaGN~vv~kps~~~~~~~~~l~~~l~~aG~p~g~v~~v~~~~~~~~~~l~~~~~v~~v~~tGs~ 160 (414)
||||+...++++++||++||+||+|||+.+|+++..+++++.++|+|+|++|++++ +.++++.|+.||+||+|.||||+
T Consensus 165 ~NfP~~~~~~~~~~ALaaGN~VV~Kps~~~p~~~~~l~~~~~~aglP~gv~~~v~g-~~e~g~~L~~~~~v~~V~fTGS~ 243 (503)
T d1a4sa_ 165 WNYPFMIAAWKCAPALACGNAVVFKPSPMTPVTGVILAEIFHEAGVPVGLVNVVQG-GAETGSLLCHHPNVAKVSFTGSV 243 (503)
T ss_dssp SSSHHHHHHHHHHHHHHTTCEEEEECCTTSCHHHHHHHHHHHHTTCCTTSEEECCC-SHHHHHHHHHCTTCCEEEEESCH
T ss_pred CCChHHHHHHHHHHHHHcCCEEEEECCCCChHHHHHHHHHHHHhCcCCCeEEEecC-CHHHHHHHHhCCCcCEEEEeCCH
Confidence 99999999999999999999999999999999999999999999999999999999 67899999999999999999999
Q ss_pred HHHHHHHHHHHhcccceeEEEcCCCCCceEcCCCCHHHHHHHHHHHhhccCCCCcccCceEEEeCchHHHHHHHHHHHHh
Q 015042 161 DVGRLVMQAAAASNLKQVSLELGGKSPLLIFDDADLDTAADVALLGNLYNKGEICVASSRVFVQEGIYDKFEKKLLEKAK 240 (414)
Q Consensus 161 ~~g~~i~~~~a~~~~~~~~~e~gg~~~~iV~~dadl~~aa~~i~~~~~~~~Gq~C~a~~~i~V~~~i~d~f~~~l~~~~~ 240 (414)
.+|+.|++.++ ++++|+++|+|||||+||++|||++.|++.+++++|.++||.|++++|+|||++++++|++++.+.++
T Consensus 244 ~~G~~i~~~aa-~~~~~~~lElGG~~p~iV~~dAdl~~a~~~i~~~~~~~~GQ~C~a~~ri~v~~~~~~~~~~~l~~~~~ 322 (503)
T d1a4sa_ 244 PTGKKVMEMSA-KTVKHVTLELGGKSPLLIFKDCELENAVRGALMANFLTQGQVCTNGTRVFVQREIMPQFLEEVVKRTK 322 (503)
T ss_dssp HHHHHHHHHHH-TTTCEEEEECCCCCEEEECTTSCHHHHHHHHHHTTCGGGGCCTTCCCEEEEEGGGHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhh-hcCCcEEEECCCcCcEEECCCccHHHHhhhhhcchhccCCCccccCcceEEEechhhhHHHHHHHhhh
Confidence 99999999988 89999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hcccCCCCCCCCcccccCCHHHHHHHHHHHHHHHHcCCEEEeCCcccC------CCCceeeeEEEeeCCCccccccccee
Q 015042 241 AWLVGDPFDPTVRQGPQISERHFDRILSYIEHGKREGATLLTGGKPIG------DKGYYIEPTIFTNVKEDMIIAKEEIF 314 (414)
Q Consensus 241 ~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~------~~g~~~~Ptvl~~~~~~~~~~~~E~f 314 (414)
++++|+|.++.+++||++++.+++++++++++++.+|+++++||.... ..|+|++|||+.+++++|.+++||+|
T Consensus 323 ~~~~g~~~~~~~~~gp~i~~~~~~~~~~~~~~a~~~Ga~v~~gg~~~~~~~~~~~~G~~~~Ptvl~~~~~~~~~~~~E~F 402 (503)
T d1a4sa_ 323 AIVVGDPLLTETRMGGLISKPQLDKVLGFVAQAKKEGARVLCGGEPLTPSDPKLKNGYFMSPCVLDNCRDDMTCVKEEIF 402 (503)
T ss_dssp TCCBSCTTSTTCCBCCCSCHHHHHHHHHHHHHHHHHTCEEEECCSBCCCSSGGGTTSCCBCCEEEESCCTTSHHHHSCCC
T ss_pred hEeeccccccccccccccCHHHHHHHHHHHHHHHHcCCEEEECCcccCCCCcccCCceEEcCEEEeCCCCCCHHHhcccc
Confidence 999999999999999999999999999999999999999999997532 47899999999999999999999999
Q ss_pred cceEEEEeeCCHHHHHHHhhcCCCCceEEEecCCHHHHHHHHHhcceeEEEEcCcCCCCCCCCcccCCCCCCCccchHHH
Q 015042 315 GPVMALMKFKTVEEAIKSANNTQYGLAAGIVTKDLNVANTVSRSIRAGIIWINCYFGFSMDCPYGGYKMSGFGREYGLES 394 (414)
Q Consensus 315 gPvl~v~~~~~~~eai~~~n~~~~gl~~sv~s~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~p~gG~~~sG~g~~~g~~~ 394 (414)
|||++|++|+|.||||+++|+++|||++||||+|.+.++++++++++|+|+||++....+.+||||+|.||+|+++|++|
T Consensus 403 gPvl~v~~~~~~~eai~~an~~~~gL~~~i~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~PfGG~k~SG~G~~~g~~~ 482 (503)
T d1a4sa_ 403 GPVMSVLPFDTEEEVLQRANNTTFGLASGVFTRDISRAHRVAANLEAGTCYINTYSISPVEVPFGGYKMSGFGRENGQAT 482 (503)
T ss_dssp SSEEEEEEECCHHHHHHHHHCSSCCSEEEEECSBHHHHHHHHHHSCSSEEEESCCCCCCTTSCBCCSGGGEECCBSTTGG
T ss_pred CceEEEEEcCCHHHHHHHHhCCCCCCeEEEEcCCHHHHHHHHHhCCeeEEEEeCCCCCCCCCCccCcccCcCCcchHHHH
Confidence 99999999999999999999999999999999999999999999999999999988877889999999999999999999
Q ss_pred HHhhheeeEEEeeCC-CCCCC
Q 015042 395 LYKYLQIKSVVTPIY-NSPWL 414 (414)
Q Consensus 395 ~~~~~~~k~i~~~~~-~~~~~ 414 (414)
+++||+.|+|+++.+ -+.||
T Consensus 483 l~~~t~~k~v~~~~~~~~~~f 503 (503)
T d1a4sa_ 483 VDYYSQLKTVIVEMGDVDSLF 503 (503)
T ss_dssp GGGSEEEEEEEECCSCCCCCC
T ss_pred HHHhhCeEEEEEcCCCCCCCC
Confidence 999999999999975 57776
|
| >d1wnda_ c.82.1.1 (A:) Putative betaine aldehyde dehydrogenase YdcW {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: Putative betaine aldehyde dehydrogenase YdcW species: Escherichia coli [TaxId: 562]
Probab=100.00 E-value=8.6e-88 Score=682.23 Aligned_cols=406 Identities=37% Similarity=0.636 Sum_probs=379.0
Q ss_pred CHHHHHHHHHhHHHHHHHHHHhcCCChHHHhhchHHHHHHHHHHHHHhhhhhcCccccc-CCCcccceeecCCceEEEEc
Q 015042 1 MWKFADLIEEHVEELAALDALDAGKVYLRAKTAEIPGAAEFLRFFAGAADKIHGEVLKM-SSELQGYTLREPVGVVGHII 79 (414)
Q Consensus 1 L~~~a~~l~~~~~~l~~~~~~etGk~~~e~~~~ei~~~~~~l~~~a~~~~~~~~~~~~~-~~~~~~~~~~~P~Gvv~~i~ 79 (414)
|+++++.|++|+++|++++++|+|||..++...++..+...+++++...........+. ..+...+++++|+|||++|+
T Consensus 67 L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVV~~I~ 146 (474)
T d1wnda_ 67 LLKLADVIEENGQVFAELESRNCGKPLHSAFNDEIPAIVDVFRFFAGAARCLNGLAAGEYLEGHTSMIRRDPLGVVASIA 146 (474)
T ss_dssp HHHHHHHHHHTHHHHHHHHHHHHCCCHHHHHHTHHHHHHHHHHHHHHHTTCCEEECBEEEETTEEEEEEEEECSEEEEEC
T ss_pred HHHHHHHHHhCHHHHHHHHHHHhCCChhHhhhcccccccccccccccccccccccccccccCCcceEEEEecccceEEEe
Confidence 57899999999999999999999999998766677777777777776554433222221 24667889999999999999
Q ss_pred CCccchHHHHHhHHHHHhhCCeEEeecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhhHHHhhhCCCccEEEEeCC
Q 015042 80 PWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLTALYYAHLAKLAGIPDGVLNVVPGFGPTAGAAICSHMDIDYVCFTGS 159 (414)
Q Consensus 80 p~n~P~~~~~~~~~~aLaaGN~vv~kps~~~~~~~~~l~~~l~~aG~p~g~v~~v~~~~~~~~~~l~~~~~v~~v~~tGs 159 (414)
|||||+...++++++||++||+||+|||+.+|+++..+++++.++ +|+|++|++++++.++++.|+.||+|++|.||||
T Consensus 147 p~N~P~~~~~~~~a~ALaaGN~Vv~Kps~~~p~~~~~~~~l~~~~-lP~gv~~~v~g~~~~~g~~L~~~p~i~~v~fTGS 225 (474)
T d1wnda_ 147 PWNYPLMMAAWKLAPALAAGNCVVLKPSEITPLTALKLAELAKDI-FPAGVVNILFGRGKTVGDPLTGHPKVRMVSLTGS 225 (474)
T ss_dssp CSSSHHHHHHHHHHHHHHTTCEEEEECCTTCCHHHHHHHHHHTTT-SCTTSEEECCCCTTTTHHHHHTCTTEEEEEEESC
T ss_pred ecchHhhhhhccHHHHHHhCCCEEEeCCCcCcHHHHHHHHHHHHh-CCCCcEEEEeCCcHHHHHHHHhCCCcCEEEeeCC
Confidence 999999999999999999999999999999999999999998765 9999999999988889999999999999999999
Q ss_pred cHHHHHHHHHHHhcccceeEEEcCCCCCceEcCCCCHHHHHHHHHHHhhccCCCCcccCceEEEeCchHHHHHHHHHHHH
Q 015042 160 TDVGRLVMQAAAASNLKQVSLELGGKSPLLIFDDADLDTAADVALLGNLYNKGEICVASSRVFVQEGIYDKFEKKLLEKA 239 (414)
Q Consensus 160 ~~~g~~i~~~~a~~~~~~~~~e~gg~~~~iV~~dadl~~aa~~i~~~~~~~~Gq~C~a~~~i~V~~~i~d~f~~~l~~~~ 239 (414)
+.+|+.|.+.++ ++++|+++|+|||||+||++|||++.|++.+++++|.|+||.|++++++|||+++||+|++.|++.+
T Consensus 226 ~~~G~~i~~~a~-~~~k~~~lElgG~~p~iV~~dad~~~a~~~i~~~~~~~~GQ~C~a~~rv~V~~~i~d~~~~~l~~~~ 304 (474)
T d1wnda_ 226 IATGEHIISHTA-SSIKRTHMELGGKAPVIVFDDADIEAVVEGVRTFGYYNAGQDCTAACRIYAQKGIYDTLVEKLGAAV 304 (474)
T ss_dssp HHHHHHHHHHHG-GGTCEEEEECCCCCEEEECTTSCHHHHHHHHHHHTTGGGGCSTTCCCEEEEETTTHHHHHHHHHHHH
T ss_pred HHHHHHHHHhhh-cCCCeEEEEcCCCCceEEcCchhhhhhhhhhhhhcccCCCcccccccccccccccchhhhhhhHHHH
Confidence 999999999988 8999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhcccCCCCCCCCcccccCCHHHHHHHHHHHHHHHHcCC-EEEeCCcccCCCCceeeeEEEeeCCCcccccccceecceE
Q 015042 240 KAWLVGDPFDPTVRQGPQISERHFDRILSYIEHGKREGA-TLLTGGKPIGDKGYYIEPTIFTNVKEDMIIAKEEIFGPVM 318 (414)
Q Consensus 240 ~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ga-~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl 318 (414)
+++++|+|.++++.+||+++..+.+++.+++++++..|+ .++.|+....+.|+|+.|||+.++++++.+++||+||||+
T Consensus 305 ~~l~~G~~~~~~~~~Gpli~~~~~~~~~~~i~~a~~~ga~~v~~G~~~~~~~g~~~~Ptil~~~~~~~~~~~eE~FGPVl 384 (474)
T d1wnda_ 305 ATLKSGAPDDESTELGPLSSLAHLERVGKAVEEAKATGHIKVITGGEKRKGNGYYYAPTLLAGALQDDAIVQKEVFGPVV 384 (474)
T ss_dssp HTCCBCCTTSTTCCBCCCSCHHHHHHHHHHHHHHHHTSSCEEEECCSBCSSSSCCBCCEEEECCCTTSHHHHSCCCSSEE
T ss_pred HhhccCCcCCCCceecccccccccchHHHHHHHHHHCCCeEEEeCCcccCCCceEEeeeEeecccccccceeecccCCeE
Confidence 999999999999999999999999999999999999998 5666776666789999999999999999999999999999
Q ss_pred EEEeeCCHHHHHHHhhcCCCCceEEEecCCHHHHHHHHHhcceeEEEEcCcCCCCCCCCcccCCCCCCCccchHHHHHhh
Q 015042 319 ALMKFKTVEEAIKSANNTQYGLAAGIVTKDLNVANTVSRSIRAGIIWINCYFGFSMDCPYGGYKMSGFGREYGLESLYKY 398 (414)
Q Consensus 319 ~v~~~~~~~eai~~~n~~~~gl~~sv~s~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~p~gG~~~sG~g~~~g~~~~~~~ 398 (414)
+|++|+|+||||+++|+++|||++||||+|.++++++++++++|+|+||++....+.+||||+|.||+|+++|.+|+++|
T Consensus 385 ~v~~~~~~deai~~an~~~~GL~a~i~t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~PfGG~k~SG~G~~~g~~gl~~~ 464 (474)
T d1wnda_ 385 SVTPFDNEEQVVNWANDSQYGLASSVWTKDVGRAHRVSARLQYGCTWVNTHFMLVSEMPHGGQKLSGYGKDMSLYGLEDY 464 (474)
T ss_dssp EEEEECCHHHHHHHHHSSSCCSEEEEECSBHHHHHHHHHHCCSSEEEESCCCCCCTTSCBCCSGGGEECCBSHHHHHHTT
T ss_pred EEEEeCCHHHHHHHHhCCCCCCeEEEEeCCHHHHHHHHHhCCccEEEEeCCCCccCCCCcccccccccCccCHHHHHHHc
Confidence 99999999999999999999999999999999999999999999999999988888999999999999999999999999
Q ss_pred heeeEEEeeC
Q 015042 399 LQIKSVVTPI 408 (414)
Q Consensus 399 ~~~k~i~~~~ 408 (414)
|++|+|+++.
T Consensus 465 t~~k~v~i~~ 474 (474)
T d1wnda_ 465 TVVRHVMVKH 474 (474)
T ss_dssp EEEEEEEEEC
T ss_pred CCEEEEEEeC
Confidence 9999998863
|
| >d1uzba_ c.82.1.1 (A:) 1-pyrroline-5-carboxylate dehydrogenase {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: 1-pyrroline-5-carboxylate dehydrogenase species: Thermus thermophilus [TaxId: 274]
Probab=100.00 E-value=1.1e-85 Score=672.75 Aligned_cols=405 Identities=33% Similarity=0.575 Sum_probs=375.3
Q ss_pred CHHHHHHHHHhHHHHHHHHHHhcCCChHHHhhchHHHHHHHHHHHHHhhhhhcCccccc--CCCcccceeecCCceEEEE
Q 015042 1 MWKFADLIEEHVEELAALDALDAGKVYLRAKTAEIPGAAEFLRFFAGAADKIHGEVLKM--SSELQGYTLREPVGVVGHI 78 (414)
Q Consensus 1 L~~~a~~l~~~~~~l~~~~~~etGk~~~e~~~~ei~~~~~~l~~~a~~~~~~~~~~~~~--~~~~~~~~~~~P~Gvv~~i 78 (414)
|+++++.|++|+++|++++++|+|||..++ ..|+..+++.+++++.......+..... ..+...+.+++|+|||++|
T Consensus 102 L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a-~~ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~I 180 (516)
T d1uzba_ 102 LLKAAALMRRRKRELEATLVYEVGKNWVEA-SADVAEAIDFIEYYARAALRYRYPAVEVVPYPGEDNESFYVPLGAGVVI 180 (516)
T ss_dssp HHHHHHHHHHTHHHHHHHHHHHHCCCHHHH-HHHHHHHHHHHHHHHHHHGGGCSSCCCCCCCTTEEEEEEEEECCEEEEE
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCCcccc-chhHHHHHHHHHHHHHHHHhhhhcccccccccccceeEEeeccCccccc
Confidence 578999999999999999999999999975 5799999999999999887665432222 2455678889999999999
Q ss_pred cCCccchHHHHHhHHHHHhhCCeEEeecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhhHHHhhhCCCccEEEEeC
Q 015042 79 IPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLTALYYAHLAKLAGIPDGVLNVVPGFGPTAGAAICSHMDIDYVCFTG 158 (414)
Q Consensus 79 ~p~n~P~~~~~~~~~~aLaaGN~vv~kps~~~~~~~~~l~~~l~~aG~p~g~v~~v~~~~~~~~~~l~~~~~v~~v~~tG 158 (414)
+|||||+...++++++||++||+||+|||+.+|+++..+.+++.++|+|+|++|++++.+.++++.|+.||+|++|.|||
T Consensus 181 ~PwN~Pl~~~~~~~~~ALaaGN~Vv~Kps~~~p~~~~~l~~~~~~aglP~gv~~~v~g~~~~~~~~L~~hp~v~~I~FTG 260 (516)
T d1uzba_ 181 APWNFPVAIFTGMIVGPVAVGNTVIAKPAEDAVVVGAKVFEIFHEAGFPPGVVNFLPGVGEEVGAYLVEHPRIRFINFTG 260 (516)
T ss_dssp CCSSSTTHHHHHHHHHHHHTTCEEEEECCGGGHHHHHHHHHHHHHHTCCTTSEEECCCSSSHHHHHHHTCTTCCEEEEES
T ss_pred cccccccccccccccchhhhcccccccccchhHHHHHHHHHHHHHhCcCcCeEEEccCChHHHHHHHHhCCCcCEEeccc
Confidence 99999999999999999999999999999999999999999999999999999999998888999999999999999999
Q ss_pred CcHHHHHHHHHHHh-----cccceeEEEcCCCCCceEcCCCCHHHHHHHHHHHhhccCCCCcccCceEEEeCchHHHHHH
Q 015042 159 STDVGRLVMQAAAA-----SNLKQVSLELGGKSPLLIFDDADLDTAADVALLGNLYNKGEICVASSRVFVQEGIYDKFEK 233 (414)
Q Consensus 159 s~~~g~~i~~~~a~-----~~~~~~~~e~gg~~~~iV~~dadl~~aa~~i~~~~~~~~Gq~C~a~~~i~V~~~i~d~f~~ 233 (414)
|..+|+.|++.++. .+++|+++|+|||||+||++|||++.|++.+++++|.|+||.|++++++|||++++|+|++
T Consensus 261 s~~~G~~i~~~aa~~~~~~~~~k~v~lElgG~~p~iV~~dAd~~~aa~~i~~~~~~~~GQ~C~a~~ri~v~~~i~d~~~~ 340 (516)
T d1uzba_ 261 SLEVGLKIYEAAGRLAPGQTWFKRAYVETGGKNAIIVDETADFDLAAEGVVVSAYGFQGQKCSAASRLILTQGAYEPVLE 340 (516)
T ss_dssp CHHHHHHHHHHHTSCCTTCCSCCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCSTTCEEEEEEEHHHHHHHHH
T ss_pred chhHHHHHHHHHhhcccchhhhhhheeeccCccceeeecchhHHHHHHHHhhhhcccCCCcccccCccccccccccchhh
Confidence 99999999988762 4689999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhhcccCCCCCCCCcccccCCHHHHHHHHHHHHHHHHcCCEEEeCCcccCCCCceeeeEEEeeCCCcccccccce
Q 015042 234 KLLEKAKAWLVGDPFDPTVRQGPQISERHFDRILSYIEHGKREGATLLTGGKPIGDKGYYIEPTIFTNVKEDMIIAKEEI 313 (414)
Q Consensus 234 ~l~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~ 313 (414)
++.++++++++| |.++.+++||+++..+++++++++++++++|+.+ +||...+..|+|++|||+.++++++.+++||+
T Consensus 341 ~~~~~~~~l~~g-~~~~~~~~gpli~~~~~~~~~~~i~~a~~~Ga~v-~~g~~~~~~g~~~~Ptvl~~v~~~~~~~~eE~ 418 (516)
T d1uzba_ 341 RVLKRAERLSVG-PAEENPDLGPVVSAEQERKVLSYIEIGKNEGQLV-LGGKRLEGEGYFIAPTVFTEVPPKARIAQEEI 418 (516)
T ss_dssp HHHHHHTTCCBS-CGGGCCSBCCCSCHHHHHHHHHHHHHHTTTSEEE-ECCSBCSSSSCCBCCEEEESCCTTSGGGTSCC
T ss_pred HHHHHHHhcccC-CCcccCccccccCHHHHHHHHHHHHHHHHCCCEE-ECCCcCCCCCceECCEEEecCCCCchhhcCCC
Confidence 999999999999 5678899999999999999999999999888655 56666666899999999999999999999999
Q ss_pred ecceEEEEeeCCHHHHHHHhhcCCCCceEEEecCCHHHHHHHHHhcceeEEEEcCcCC--CCCCCCcccCCCCCCCccch
Q 015042 314 FGPVMALMKFKTVEEAIKSANNTQYGLAAGIVTKDLNVANTVSRSIRAGIIWINCYFG--FSMDCPYGGYKMSGFGREYG 391 (414)
Q Consensus 314 fgPvl~v~~~~~~~eai~~~n~~~~gl~~sv~s~d~~~~~~~~~~l~~g~v~iN~~~~--~~~~~p~gG~~~sG~g~~~g 391 (414)
||||++|++|+|+|||++++|+++|||++||||+|.+.++++++++++|+|+||++.. ..+.+||||+|.||+|+++|
T Consensus 419 FGPvl~v~~~~d~eeai~~an~~~~gL~a~i~s~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~~~PfGG~k~SG~G~~~G 498 (516)
T d1uzba_ 419 FGPVLSVIRVKDFAEALEVANDTPYGLTGGVYSRKREHLEWARREFHVGNLYFNRKITGALVGVQPFGGFKLSGTNAKTG 498 (516)
T ss_dssp CSSEEEEEEESSHHHHHHHHHCSSCCSEEEEECSCHHHHHHHHHHSCCSEEEESSCSCCCCTTTSCBCCSGGGBSCCCBT
T ss_pred cCceEEEEEeCCHHHHHHHHHCCCCCCEEEEEcCCHHHHHHHHHhCCEeEEEEcCCCCCCCcCCCCCcCcccccCCcccc
Confidence 9999999999999999999999999999999999999999999999999999999754 45689999999999998765
Q ss_pred -HHHHHhhheeeEEEeeC
Q 015042 392 -LESLYKYLQIKSVVTPI 408 (414)
Q Consensus 392 -~~~~~~~~~~k~i~~~~ 408 (414)
.+++++||++|+|..++
T Consensus 499 ~~~~l~~~~~~k~v~~r~ 516 (516)
T d1uzba_ 499 ALDYLRLFLEMKAVAERF 516 (516)
T ss_dssp SHHHHHTTEEEEEEEEEC
T ss_pred hHHHHHHhCCeeeEEEcC
Confidence 79999999999998653
|
| >d1ky8a_ c.82.1.1 (A:) Non-phosphorylating glyceraldehyde-3-phosphate dehydrogenase GapN {Archaeon Thermoproteus tenax [TaxId: 2271]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: Non-phosphorylating glyceraldehyde-3-phosphate dehydrogenase GapN species: Archaeon Thermoproteus tenax [TaxId: 2271]
Probab=100.00 E-value=3.2e-80 Score=630.36 Aligned_cols=407 Identities=32% Similarity=0.486 Sum_probs=372.9
Q ss_pred CHHHHHHHHHhHHHHHHHHHHhcCCChHHHhhchHHHHHHHHHHHHHhhhhhcCcccccC-----CCcccceeecCCceE
Q 015042 1 MWKFADLIEEHVEELAALDALDAGKVYLRAKTAEIPGAAEFLRFFAGAADKIHGEVLKMS-----SELQGYTLREPVGVV 75 (414)
Q Consensus 1 L~~~a~~l~~~~~~l~~~~~~etGk~~~e~~~~ei~~~~~~l~~~a~~~~~~~~~~~~~~-----~~~~~~~~~~P~Gvv 75 (414)
|+++++.|++|+++|++++++|||||..++ ..|+.++++.+++++...++..+...... .+...+++++|+|||
T Consensus 81 L~~~a~~l~~~~~~la~~~~~etGk~~~~a-~~Ev~~~i~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~r~P~GVV 159 (499)
T d1ky8a_ 81 LRKAADIIERNLDVFAEVLVMNAGKPKSAA-VGEVKAAVDRLRLAELDLKKIGGDYIPGDWTYDTLETEGLVRREPLGVV 159 (499)
T ss_dssp HHHHHHHHHHTHHHHHHHHHHHHCCCHHHH-HHHHHHHHHHHHGGGGGGTTTCCEEEESTTSSTTTTEEEEEEEEECSEE
T ss_pred HHHHHHHHHHhHHHHHHHHHHHhCCCHHHH-hhhhhcccccccchhhhhhhhhhceeccccccccccccceeeeeccccc
Confidence 578999999999999999999999999975 57999999999999988877655432221 345678899999999
Q ss_pred EEEcCCccchHHHHHhHHHHHhhCCeEEeecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhhHHHhhhCCCccEEE
Q 015042 76 GHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLTALYYAHLAKLAGIPDGVLNVVPGFGPTAGAAICSHMDIDYVC 155 (414)
Q Consensus 76 ~~i~p~n~P~~~~~~~~~~aLaaGN~vv~kps~~~~~~~~~l~~~l~~aG~p~g~v~~v~~~~~~~~~~l~~~~~v~~v~ 155 (414)
++|+|||||+...++++++||++||+||+|||+.+|.++..+.+++.++|+|.++++++.+.+ +....|+.|++++.+.
T Consensus 160 ~~I~p~N~P~~~~~~~~~~ALaaGn~Vi~Kps~~~~~~~~~l~~~~~~~~~p~~~~~~~~~~~-~~~~~l~~~~~i~~v~ 238 (499)
T d1ky8a_ 160 AAITPFNYPLFDAVNKITYSFIYGNAVVVKPSISDPLPAAMAVKALLDAGFPPDAIALLNLPG-KEAEKIVADDRVAAVS 238 (499)
T ss_dssp EEECCSSSHHHHHHHHHHHHHHTTCEEEEECCTTSCHHHHHHHHHHHHHTCCTTSEEECCCCG-GGGHHHHHCTTCCEEE
T ss_pred cccccccccchhhhhcchhhhcccccccccccccchhhhhhhccccccccccceeeecccCCh-HHHHHHhhccceeEEE
Confidence 999999999999999999999999999999999999999999999999999999999998854 6678999999999999
Q ss_pred EeCCcHHHHHHHHHHHhcccceeEEEcCCCCCceEcCCCCHHHHHHHHHHHhhccCCCCcccCceEEEeCchHHHHHHHH
Q 015042 156 FTGSTDVGRLVMQAAAASNLKQVSLELGGKSPLLIFDDADLDTAADVALLGNLYNKGEICVASSRVFVQEGIYDKFEKKL 235 (414)
Q Consensus 156 ~tGs~~~g~~i~~~~a~~~~~~~~~e~gg~~~~iV~~dadl~~aa~~i~~~~~~~~Gq~C~a~~~i~V~~~i~d~f~~~l 235 (414)
||||...++.+.+.++ .+|+++|+||+||+||++|||++.|++.+++++|.++||.|+++++||||++++|+|+++|
T Consensus 239 ftGs~~~g~~i~~~~~---~~~~~lElgG~np~iV~~dAdl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~v~d~f~~~l 315 (499)
T d1ky8a_ 239 FTGSTEVGERVVKVGG---VKQYVMELGGGDPAIVLEDADLDLAADKIARGIYSYAGQRCDAIKLVLAERPVYGKLVEEV 315 (499)
T ss_dssp EESCHHHHHHHHHHHC---SSEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCCTTCEEEEEEEHHHHHHHHHHH
T ss_pred eecccccceEEeeccc---ccceEEecCCCCeEEEcCCcChhhhhhhhhhhhhccCcccccccccccccchhHHHHHHHH
Confidence 9999999999988754 5899999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhhcccCCCCCCCCcccccCCHHHHHHHHHHHHHHHHcCCEEEeCCcccCCCCceeeeEEEe---eCCCcccccccc
Q 015042 236 LEKAKAWLVGDPFDPTVRQGPQISERHFDRILSYIEHGKREGATLLTGGKPIGDKGYYIEPTIFT---NVKEDMIIAKEE 312 (414)
Q Consensus 236 ~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~~~g~~~~Ptvl~---~~~~~~~~~~~E 312 (414)
+++++++++|+|.|+++++||+++..+++++++++++++.+|+++++||.... ..+..++++. ++.+||.+++||
T Consensus 316 ~~~~~~l~~G~p~~~~~~~gpli~~~~~~~~~~~i~~a~~~ga~v~~~~~~~~--~~~~~~~~~~~~~~~~~d~~~~~eE 393 (499)
T d1ky8a_ 316 AKRLSSLRVGDPRDPTVDVGPLISPSAVDEMMAAIEDAVEKGGRVLAGGRRLG--PTYVQPTLVEAPADRVKDMVLYKRE 393 (499)
T ss_dssp HHHHHTCCBSCTTSTTCSBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCCEEE--TTEECCEEEECCHHHHTTSHHHHSC
T ss_pred HHHHHhCccCCCCCccccccccchHHHHHHHHHHHHHHHHcCCEEeeeecccc--ccccccccccccccCCCCChhhhcc
Confidence 99999999999999999999999999999999999999999999999988753 3344444443 456799999999
Q ss_pred eecceEEEEeeCCHHHHHHHhhcCCCCceEEEecCCHHHHHHHHHhcceeEEEEcCcCCC-CCCCCcccCCCCCCCccch
Q 015042 313 IFGPVMALMKFKTVEEAIKSANNTQYGLAAGIVTKDLNVANTVSRSIRAGIIWINCYFGF-SMDCPYGGYKMSGFGREYG 391 (414)
Q Consensus 313 ~fgPvl~v~~~~~~~eai~~~n~~~~gl~~sv~s~d~~~~~~~~~~l~~g~v~iN~~~~~-~~~~p~gG~~~sG~g~~~g 391 (414)
+||||++|++|+|.+||++++|+++|||++||||+|.+.++++++++++|+|+||+++.. .+.+||||.|.||+|+++|
T Consensus 394 ~FGPvl~v~~~~~~~eai~~~n~~~~gLt~sv~s~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~~PfGG~k~SG~G~~~g 473 (499)
T d1ky8a_ 394 VFAPVASAVEVKDLDQAIELANGRPYGLDAAVFGRDVVKIRRAVRLLEVGAIYINDMPRHGIGYYPFGGRKKSGVFREGI 473 (499)
T ss_dssp CCSSEEEEEEESSHHHHHHHHHTSSEESEEEEECCCHHHHHHHHHHCCSSEEEETSCCCCTTSSSCBCCEETTEESCBST
T ss_pred ccCceEEEEEcCCHHHHHHHHhCCCCCCeEEEEcCCHHHHHHHHHhCCEeEEEEeCCCCCCCCCCCccccccCcCCCCCH
Confidence 999999999999999999999999999999999999999999999999999999998764 4789999999999999999
Q ss_pred HHHHHhhheeeEEEeeCC-CCCCC
Q 015042 392 LESLYKYLQIKSVVTPIY-NSPWL 414 (414)
Q Consensus 392 ~~~~~~~~~~k~i~~~~~-~~~~~ 414 (414)
.+|+++||++|+|++++. ...|.
T Consensus 474 ~~~~~~~~~~k~i~~~~~~~~~~~ 497 (499)
T d1ky8a_ 474 GYAVEAVTAYKTIVFNYKGKGVWK 497 (499)
T ss_dssp TTTHHHHEEEEEEEEECTTSSSCS
T ss_pred HHHHHHhhCEEEEEEcCCCCCCCC
Confidence 999999999999999975 45563
|
| >d1ad3a_ c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), ALDH {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: Aldehyde reductase (dehydrogenase), ALDH species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=100.00 E-value=5e-80 Score=620.00 Aligned_cols=396 Identities=29% Similarity=0.416 Sum_probs=357.4
Q ss_pred CHHHHHHHHHhHHHHHHHHHHhcCCChHHHhhchHHHHHHHHHHHHHhhhhhcCcc-c---ccCCCcccceeecCCceEE
Q 015042 1 MWKFADLIEEHVEELAALDALDAGKVYLRAKTAEIPGAAEFLRFFAGAADKIHGEV-L---KMSSELQGYTLREPVGVVG 76 (414)
Q Consensus 1 L~~~a~~l~~~~~~l~~~~~~etGk~~~e~~~~ei~~~~~~l~~~a~~~~~~~~~~-~---~~~~~~~~~~~~~P~Gvv~ 76 (414)
|+++++.|++|+++|++++++|+||+..++...|+..+++.++++++......... . ....+...++.++|+|||+
T Consensus 28 L~~~a~~l~~~~~~l~~~~~~e~GK~~~ea~~~ev~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~ 107 (446)
T d1ad3a_ 28 LEALQRMINENLKSISGALASDLGKNEWTSYYEEVAHVLEELDTTIKELPDWAEDEPVAKTRQTQQDDLYIHSEPLGVVL 107 (446)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHTHHHHHHHHHHHHHHHHHHHSCEECCCCSTTTTSEEEEEEEECSEEE
T ss_pred HHHHHHHHHHCHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccccCCCCCCcceEEEeecceeEe
Confidence 57899999999999999999999999998777799999999998887665443221 1 1123456688899999999
Q ss_pred EEcCCccchHHHHHhHHHHHhhCCeEEeecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhhHHHhhhCCCccEEEE
Q 015042 77 HIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLTALYYAHLAKLAGIPDGVLNVVPGFGPTAGAAICSHMDIDYVCF 156 (414)
Q Consensus 77 ~i~p~n~P~~~~~~~~~~aLaaGN~vv~kps~~~~~~~~~l~~~l~~aG~p~g~v~~v~~~~~~~~~~l~~~~~v~~v~~ 156 (414)
+|+|||||+..+++++++||++||+||+|||+.+|.++..+.+++++. +|+++++++.+.+... ..+ .++++|.|.|
T Consensus 108 ~I~P~N~P~~~~~~~~~~ALaaGN~vi~Kps~~~p~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~-~~~-~~~~~~~v~f 184 (446)
T d1ad3a_ 108 VIGAWNYPFNLTIQPMVGAVAAGNAVILKPSEVSGHMADLLATLIPQY-MDQNLYLVVKGGVPET-TEL-LKERFDHIMY 184 (446)
T ss_dssp EECCSSSTTHHHHHHHHHHHHTTCEEEEECCSTTHHHHHHHHHHHHHH-SCTTTEEECCCSHHHH-HHH-TTSCCSEEEE
T ss_pred cccccccccccccccccccchhcccccccccceecccccccccccccc-ccccccccccccchhh-hhh-cccccCceEE
Confidence 999999999999999999999999999999999999999999998775 9999999998855443 344 4567999999
Q ss_pred eCCcHHHHHHHHHHHhcccceeEEEcCCCCCceEcCCCCHHHHHHHHHHHhhccCCCCcccCceEEEeCchHHHHHHHHH
Q 015042 157 TGSTDVGRLVMQAAAASNLKQVSLELGGKSPLLIFDDADLDTAADVALLGNLYNKGEICVASSRVFVQEGIYDKFEKKLL 236 (414)
Q Consensus 157 tGs~~~g~~i~~~~a~~~~~~~~~e~gg~~~~iV~~dadl~~aa~~i~~~~~~~~Gq~C~a~~~i~V~~~i~d~f~~~l~ 236 (414)
|||+.+|+.|.+.++ ++++|+++|+|||||+||++|||++.|++.+++++|.|+||.|+++++||||++++|+|+++|.
T Consensus 185 TGs~~~G~~i~~~aa-~~~~~~~lElgG~np~iV~~dADl~~Aa~~iv~~~~~~~GQ~C~a~~rv~v~~~i~~~f~~~l~ 263 (446)
T d1ad3a_ 185 TGSTAVGKIVMAAAA-KHLTPVTLELGGKSPCYVDKDCDLDVACRRIAWGKFMNSGQTCVAPDYILCDPSIQNQIVEKLK 263 (446)
T ss_dssp ESCHHHHHHHHHHHH-TTTCCEEEECCCCCEEEECSSSCHHHHHHHHHHHHHTTTTCCTTSCCEEEECGGGHHHHHHHHH
T ss_pred ECcHHHHHHHHHHHH-hcCCcEEEECCCcCcEEEecCCchHHHHHHHHHHHhcCCCCccccCCccccccchhHHHHHhhh
Confidence 999999999999988 8899999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhhcccCCCCCCCCcccccCCHHHHHHHHHHHHHHHHcCCEEEeCCcccCCCCceeeeEEEeeCCCcccccccceecc
Q 015042 237 EKAKAWLVGDPFDPTVRQGPQISERHFDRILSYIEHGKREGATLLTGGKPIGDKGYYIEPTIFTNVKEDMIIAKEEIFGP 316 (414)
Q Consensus 237 ~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgP 316 (414)
+.++.+ +|++.++.+++||++++.+++++.++++++ +...|+.. ...++|+.|||+.+++++|++++||+|||
T Consensus 264 ~~~~~~-~g~~~~~~~~~gp~i~~~~~~~~~~~~~~a-----~~~~g~~~-~~~~~~~~Ptil~~v~~~~~~~~eE~FgP 336 (446)
T d1ad3a_ 264 KSLKDF-YGEDAKQSRDYGRIINDRHFQRVKGLIDNQ-----KVAHGGTW-DQSSRYIAPTILVDVDPQSPVMQEEIFGP 336 (446)
T ss_dssp HHHHHH-HCSCGGGCTTSCCCSCHHHHHHHHHTTTTS-----CEEECCCE-ETTTTEECCEEECSCCTTSGGGTSCCCSS
T ss_pred hhhhee-ecccccccccccchhhhhhhhhhhccccch-----hcccceee-cCCCCCcCCEEEECCCCCCHHHhCcccCc
Confidence 999887 899999999999999999999988877543 44444433 34788999999999999999999999999
Q ss_pred eEEEEeeCCHHHHHHHhhcCCCCceEEEecCCHHHHHHHHHhcceeEEEEcCcCC--CCCCCCcccCCCCCCCccchHHH
Q 015042 317 VMALMKFKTVEEAIKSANNTQYGLAAGIVTKDLNVANTVSRSIRAGIIWINCYFG--FSMDCPYGGYKMSGFGREYGLES 394 (414)
Q Consensus 317 vl~v~~~~~~~eai~~~n~~~~gl~~sv~s~d~~~~~~~~~~l~~g~v~iN~~~~--~~~~~p~gG~~~sG~g~~~g~~~ 394 (414)
|++|++|+|+||||+++|+++|||++||||+|.+.++++++++++|+|+||++.. ..+.+||||+|.||+|+++|.+|
T Consensus 337 Vl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~~a~~~~~~l~~G~v~iN~~~~~~~~~~~PfGG~k~SG~G~~~g~~~ 416 (446)
T d1ad3a_ 337 VMPIVCVRSLEEAIQFINQREKPLALYVFSNNEKVIKKMIAETSSGGVTANDVIVHITVPTLPFGGVGNSGMGAYHGKKS 416 (446)
T ss_dssp EECEEECSSHHHHHHHHHTSCCCSEEEEECSCHHHHHHHHTTCCCSEEEESSSSGGGGCTTSCCCCCGGGEECCCSTHHH
T ss_pred ceEEEEeccHHHHHHHHhCCCCCCEEEEEcCCHHHHHHHHHhCCEeEEEEeCCccCCCCCCCCccccccceeccchHHHH
Confidence 9999999999999999999999999999999999999999999999999998754 55789999999999999999999
Q ss_pred HHhhheeeEEEee
Q 015042 395 LYKYLQIKSVVTP 407 (414)
Q Consensus 395 ~~~~~~~k~i~~~ 407 (414)
+++||++|+|+++
T Consensus 417 l~~ft~~k~v~~~ 429 (446)
T d1ad3a_ 417 FETFSHRRSCLVK 429 (446)
T ss_dssp HHHTEEEEEEEEC
T ss_pred HHHHhceeEEEEc
Confidence 9999999999875
|
| >d1euha_ c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), ALDH {Streptococcus mutans [TaxId: 1309]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: Aldehyde reductase (dehydrogenase), ALDH species: Streptococcus mutans [TaxId: 1309]
Probab=100.00 E-value=6.4e-77 Score=603.45 Aligned_cols=400 Identities=34% Similarity=0.519 Sum_probs=369.3
Q ss_pred CHHHHHHHHHhHHHHHHHHHHhcCCChHHHhhchHHHHHHHHHHHHHhhhhhcCcc-----cc-cCCCcccceeecCCce
Q 015042 1 MWKFADLIEEHVEELAALDALDAGKVYLRAKTAEIPGAAEFLRFFAGAADKIHGEV-----LK-MSSELQGYTLREPVGV 74 (414)
Q Consensus 1 L~~~a~~l~~~~~~l~~~~~~etGk~~~e~~~~ei~~~~~~l~~~a~~~~~~~~~~-----~~-~~~~~~~~~~~~P~Gv 74 (414)
|+++++.|++|+++|++++++|+||+..++ ..|+...+..++++........... .. ...+...+.+++|+||
T Consensus 67 L~~~a~~L~~~~~~la~~~~~e~Gk~~~~a-~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~P~GV 145 (474)
T d1euha_ 67 LHKVADILMRDKEKIGAILSKEVAKGYKSA-VSEVVRTAEIINYAAEEGLRMEGEVLEGGSFEAASKKKIAVVRREPVGL 145 (474)
T ss_dssp HHHHHHHHHHTHHHHHHHHHHHHTCCHHHH-HHHHHHHHHHHHHHHHHHTTCCEEEEEGGGTCGGGTTEEEEEEEEECSE
T ss_pred HHHHHHHHHHhHHHHHHHHHHHhCCCcchh-ccccchhHHHHHHHHHHHhhhhcccccccccccccCCceeEEEeeceeE
Confidence 578999999999999999999999999975 6699999999998887664432221 11 1134456788999999
Q ss_pred EEEEcCCccchHHHHHhHHHHHhhCCeEEeecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhhHHHhhhCCCccEE
Q 015042 75 VGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLTALYYAHLAKLAGIPDGVLNVVPGFGPTAGAAICSHMDIDYV 154 (414)
Q Consensus 75 v~~i~p~n~P~~~~~~~~~~aLaaGN~vv~kps~~~~~~~~~l~~~l~~aG~p~g~v~~v~~~~~~~~~~l~~~~~v~~v 154 (414)
|++|+|||||+...+..+++||++||+||+|||+.+|.++.++.++|.++|+|+|++|++++++.++++.|+.||+|+.|
T Consensus 146 V~~I~p~n~P~~~~~~~~~~aL~aGN~vV~Kps~~~~~~~~~l~~~~~eaglP~gv~~~i~g~~~~~~~~L~~~~~v~~v 225 (474)
T d1euha_ 146 VLAISPFNYPVNLAGSKIAPALIAGNVIAFKPPTQGSISGLLLAEAFAEAGLPAGVFNTITGRGSEIGDYIVEHQAVNFI 225 (474)
T ss_dssp EEEECCTTSTTHHHHHHHHHHHHTTCEEEEECCSTTHHHHHHHHHHHHHHTCCTTTEEECCCCHHHHHHHHHHCTTCCEE
T ss_pred EEEeccccccchhhhhhchhhhhccccceecccccchHHHHHHHHHHHHhCCCcCeEEEccCChHHHHHHHHhCCCccEE
Confidence 99999999999999999999999999999999999999999999999999999999999999878899999999999999
Q ss_pred EEeCCcHHHHHHHHHHHhcccceeEEEcCCCCCceEcCCCCHHHHHHHHHHHhhccCCCCcccCceEEEeCchHHHHHHH
Q 015042 155 CFTGSTDVGRLVMQAAAASNLKQVSLELGGKSPLLIFDDADLDTAADVALLGNLYNKGEICVASSRVFVQEGIYDKFEKK 234 (414)
Q Consensus 155 ~~tGs~~~g~~i~~~~a~~~~~~~~~e~gg~~~~iV~~dadl~~aa~~i~~~~~~~~Gq~C~a~~~i~V~~~i~d~f~~~ 234 (414)
.||||..+++.+.+.++ .+|+++|+||+||+||++|||++.|++.+++++|.++||.|+++++||||++++++|++.
T Consensus 226 ~ftGs~~~~~~i~~~a~---~k~~~~e~gG~~~~iV~~dAdl~~aa~~i~~~~~~~~Gq~C~a~~~i~v~~~~~~~~~~~ 302 (474)
T d1euha_ 226 NFTGSTGIGERIGKMAG---MRPIMLELGGKDSAIVLEDADLELTAKNIIAGAFGYSGQRCTAVKRVLVMESVADELVEK 302 (474)
T ss_dssp EEESCHHHHHHHHHHTT---TSCEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCCSSSEEEEEEEHHHHHHHHHH
T ss_pred EecCccccccchhhhcc---cceEEEecCCcceEEEECCCchhhHHHHHHHHHhhCCCCccccccccchhhhhhhhhhHh
Confidence 99999999999998754 689999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhhcccCCCCCCCCcccccCCHHHHHHHHHHHHHHHHcCCEEEeCCcccCCCCceeeeEEEeeCCCccccccccee
Q 015042 235 LLEKAKAWLVGDPFDPTVRQGPQISERHFDRILSYIEHGKREGATLLTGGKPIGDKGYYIEPTIFTNVKEDMIIAKEEIF 314 (414)
Q Consensus 235 l~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~f 314 (414)
++++...++.|++.+. ..++|++.....+++.+.+..+...+...+.++.. .|+|+.|||+..++++|.+++||+|
T Consensus 303 l~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~g~~~~Ptvl~~~~~~~~~~~eE~f 378 (474)
T d1euha_ 303 IREKVLALTIGNPEDD-ADITPLIDTKSADYVEGLINDANDKGATALTEIKR---EGNLICPILFDKVTTDMRLAWEEPF 378 (474)
T ss_dssp HHHHHHTSCBSCGGGT-CSBCCCSCHHHHHHHHHHHHHHHHTTCEECSCCCE---ETTEECCEEEESCCTTSGGGTSCCC
T ss_pred hhhhhhhccccCcccc-cccccccchHHHHHHHHHHHhhhcccccccccCCC---CCCCcCCEEEecCCCcchhhhcccC
Confidence 9999999999998865 46889999999999999999999998888765544 7899999999999999999999999
Q ss_pred cceEEEEeeCCHHHHHHHhhcCCCCceEEEecCCHHHHHHHHHhcceeEEEEcCcCC-CCCCCCcccCCCCCCCccchHH
Q 015042 315 GPVMALMKFKTVEEAIKSANNTQYGLAAGIVTKDLNVANTVSRSIRAGIIWINCYFG-FSMDCPYGGYKMSGFGREYGLE 393 (414)
Q Consensus 315 gPvl~v~~~~~~~eai~~~n~~~~gl~~sv~s~d~~~~~~~~~~l~~g~v~iN~~~~-~~~~~p~gG~~~sG~g~~~g~~ 393 (414)
|||++|++|+|+||||+++|+++|||++||||+|.+.+++++.++++|+|+||++.. ..+.+||||+|+||+|+++|++
T Consensus 379 gPvl~v~~~~~~deai~~~n~~~~glta~v~s~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~~pfGG~~~SG~G~~~g~~ 458 (474)
T d1euha_ 379 GPVLPIIRVTSVEEAIEISNKSEYGLQASIFTNDFPRAFGIAEQLEVGTVHINNKTQRGTDNFPFLGAKKSGAGIQGVKY 458 (474)
T ss_dssp SSEEEEEEESCHHHHHHHHHHSSEESEEEEECSCHHHHHHHHHHSCSSEEEESSCCCCCSTTSCBCCEETTEESCBSHHH
T ss_pred CcEEEEEEeCCHHHHHHHHHCCCCCCeEEEEeCCHHHHHHHHHhCCEEEEEEECCCCCCCCCCCccccccCccCccCHHH
Confidence 999999999999999999999999999999999999999999999999999999865 4567999999999999999999
Q ss_pred HHHhhheeeEEEeeC
Q 015042 394 SLYKYLQIKSVVTPI 408 (414)
Q Consensus 394 ~~~~~~~~k~i~~~~ 408 (414)
|+++||++|+|+++.
T Consensus 459 ~l~~~~~~k~v~~~~ 473 (474)
T d1euha_ 459 SIEAMTTVKSVVFDI 473 (474)
T ss_dssp HHHHTEEEEEEEEEC
T ss_pred HHHHhCcEEEEEEec
Confidence 999999999999875
|
| >d1ez0a_ c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), ALDH {Vibrio harveyi [TaxId: 669]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: Aldehyde reductase (dehydrogenase), ALDH species: Vibrio harveyi [TaxId: 669]
Probab=100.00 E-value=2.3e-69 Score=549.59 Aligned_cols=388 Identities=22% Similarity=0.282 Sum_probs=325.2
Q ss_pred CHHHHHHHHHhHHHHHHHHHHhcCCChHHHhhchHHHHHHHHHHHHHhhhhhcCccccc---------CCCcccceeecC
Q 015042 1 MWKFADLIEEHVEELAALDALDAGKVYLRAKTAEIPGAAEFLRFFAGAADKIHGEVLKM---------SSELQGYTLREP 71 (414)
Q Consensus 1 L~~~a~~l~~~~~~l~~~~~~etGk~~~e~~~~ei~~~~~~l~~~a~~~~~~~~~~~~~---------~~~~~~~~~~~P 71 (414)
|+++++.|++|+++|++++++|+|||..++ ..|+..+++.++|+++..++........ ..+...+.+++|
T Consensus 54 L~~~a~~l~~~~~~la~~~~~e~Gkp~~~a-~~Ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P 132 (504)
T d1ez0a_ 54 LRTIASELEARSDDIIARAHLETALPEVRL-TGEIARTANQLRLFADVVNSGSYHQAILDTPNPTRAPLPKPDIRRQQIA 132 (504)
T ss_dssp HHHHHHHHHHTHHHHHHHHHHHHCCCHHHH-HHHHHHHHHHHHHHHHHHHHTGGGCEEEECCBTTCSSSCBCCEEEEEEE
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCCHHHH-HHHHHHHHHHHHHHHHHHhhhccccccccccccccccCcccceeEEEec
Confidence 578999999999999999999999999975 5799999999999998876543321110 123456778889
Q ss_pred CceEEEEcCCccchHHHH--HhHHHHHhhCCeEEeecCCCChHHHHHHHH----HHHHcCCCCCcEEEEeCCchhhHHHh
Q 015042 72 VGVVGHIIPWNFPTTMFF--MKVSPALAAGCTMIVKPAEQTPLTALYYAH----LAKLAGIPDGVLNVVPGFGPTAGAAI 145 (414)
Q Consensus 72 ~Gvv~~i~p~n~P~~~~~--~~~~~aLaaGN~vv~kps~~~~~~~~~l~~----~l~~aG~p~g~v~~v~~~~~~~~~~l 145 (414)
+|||++|+|||||+.... +++++||++||+||+|||+.+|.++..+.+ ++.++|+|+|++|++++.+.++++.|
T Consensus 133 ~GvV~~I~PwNfPl~~~~~~~~~a~ALaaGN~VVlKPs~~tp~ta~~~~~li~~a~~~aGlP~Gv~~~v~g~~~~~g~~L 212 (504)
T d1ez0a_ 133 LGPVAVFGASNFPLAFSAAGGDTASALAAGCPVIVKGHTAHPGTSQIVAECIEQALKQEQLPQAIFTLLQGNQRALGQAL 212 (504)
T ss_dssp CSCEEEECCSSCTTTTSTTSHHHHHHHHHTCCEEEECCTTCHHHHHHHHHHHHHHHHHHTCCGGGEEEECCSCTHHHHHH
T ss_pred CceEEEEecccccchhhhhhHHHHHHHHHhccceecCcccccchhhhhhhHHHHHhhhhccccCceeccccccccccccc
Confidence 999999999999986544 589999999999999999999998877654 46678999999999999888899999
Q ss_pred hhCCCccEEEEeCCcHHHHHHHHHHHhcccce--eEEEcCCCCCceEcCCCCHHHHH--HHHHHHhhccCCCCcccCceE
Q 015042 146 CSHMDIDYVCFTGSTDVGRLVMQAAAASNLKQ--VSLELGGKSPLLIFDDADLDTAA--DVALLGNLYNKGEICVASSRV 221 (414)
Q Consensus 146 ~~~~~v~~v~~tGs~~~g~~i~~~~a~~~~~~--~~~e~gg~~~~iV~~dadl~~aa--~~i~~~~~~~~Gq~C~a~~~i 221 (414)
++||+|++|.||||+.+|+.|.+.++ .+++| +++|+|||||+||++|||++.|+ +.++.++|.|+||.|++++++
T Consensus 213 ~~~p~v~~V~FTGS~~~g~~i~~~aa-~~~~~~~l~~ElGGknp~iV~~dAd~~~Aa~~~~~~~~~~~~~GQ~C~a~~rv 291 (504)
T d1ez0a_ 213 VSHPEIKAVGFTGSVGGGRALFNLAH-ERPEPIPFYGELGAINPTFIFPSAMRAKADLADQFVASMTMGCGQFCTKPGVV 291 (504)
T ss_dssp HHCTTCCEEEEESCHHHHHHHHHHHH-HSSSCCCEEEECCCCCEEEECHHHHHHCTTHHHHHHHHHTGGGGCCTTCCCEE
T ss_pred ccccccceeeeccchHHHHHHHhhhh-cccccccccccccccccccccccccHHHHhhhhccccchhhccCccccccccc
Confidence 99999999999999999999999988 77766 45699999999999999999874 478999999999999999999
Q ss_pred EEeCchH-HHHHHHHHHHHhhcccCCCCCCCCcccccCCHHHHHHHHHHHHHHHHcCCEEEeCCcccCCCCceeeeEEEe
Q 015042 222 FVQEGIY-DKFEKKLLEKAKAWLVGDPFDPTVRQGPQISERHFDRILSYIEHGKREGATLLTGGKPIGDKGYYIEPTIFT 300 (414)
Q Consensus 222 ~V~~~i~-d~f~~~l~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~~~g~~~~Ptvl~ 300 (414)
||+++.+ +.|++.+++.++. + ++++.+||+++..+.+++ ++.+...++++.+|+.. +.+..|+++.
T Consensus 292 ~v~~~~~~~~~~~~~~~~~~~---~---~~~~~~gp~i~~~~~~~v---i~~~~~~~~~~~~~~~~----~~~~~~~~~~ 358 (504)
T d1ez0a_ 292 FALNTPETQAFIETAQSLIRQ---Q---SPSTLLTPGIRDSYQSQV---VSRGSDDGIDVTFSQAE----SPCVASALFV 358 (504)
T ss_dssp EEESSHHHHHHHHHHHHHHHH---C---CCBCCSSHHHHHHHHHHH---HHHHTSTTEEEEECCCC----TTSBCCEEEE
T ss_pred cchhhhhHHHHhhhhhhhhhh---c---ccccccccchhhhhhhhh---hhhhhhhhhhccccccc----ccccCCcccc
Confidence 9887764 5677777666553 2 456789999988877665 66677788888888764 3445555554
Q ss_pred e---CCCcccccccceecceEEEEeeCCHHHHHHHhhcCCCCceEEEecC--CHHHHHHHHHhcc--eeEEEEcCcCC--
Q 015042 301 N---VKEDMIIAKEEIFGPVMALMKFKTVEEAIKSANNTQYGLAAGIVTK--DLNVANTVSRSIR--AGIIWINCYFG-- 371 (414)
Q Consensus 301 ~---~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~sv~s~--d~~~~~~~~~~l~--~g~v~iN~~~~-- 371 (414)
. +..++++++||+||||++|++|+|.|||++++|+++|||++||||+ |..++.+++++|+ +|+|+||++++
T Consensus 359 ~~~~~~~~~~~~~eE~FGPvl~i~~~~~~~eai~~an~~~~gL~a~I~t~d~d~~~a~~~~~~l~~~aG~v~iN~~~tG~ 438 (504)
T d1ez0a_ 359 TSSENWRKHPAWEEEIFGPQSLIVVCENVADMLSLSEMLAGSLTATIHATEEDYPQVSQLIPRLEEIAGRLVFNGWPTGV 438 (504)
T ss_dssp EEHHHHHHCGGGGSCCCSSEEEEEEESSHHHHHHHHHTCCCEEEEEEECCGGGHHHHHHHHHHHHTTEEEEEESSCSSCC
T ss_pred ccccccccchhhcccccCCeeeeeecCCHHHHHHHHHCCCCCceEEEEecchhHHHHHHHHHHHhCCccEEEEcCCcccc
Confidence 3 3347889999999999999999999999999999999999999996 4458899999997 89999998753
Q ss_pred -----CCCCCCcccCCCCCCCccchHHHHHhhheeeEE
Q 015042 372 -----FSMDCPYGGYKMSGFGREYGLESLYKYLQIKSV 404 (414)
Q Consensus 372 -----~~~~~p~gG~~~sG~g~~~g~~~~~~~~~~k~i 404 (414)
...+.||||.+.||.| ..|.+++++|+++.++
T Consensus 439 ~v~~~~~~ggpf~g~~~sg~~-~~G~~~i~~f~r~v~~ 475 (504)
T d1ez0a_ 439 EVGYAMVHGGPYPASTHSAST-SVGAEAIHRWLRPVAY 475 (504)
T ss_dssp CCSSSCCCCCSTTSCSCSSCC-SSSGGGGGGGEEEEEE
T ss_pred eecCcCCCCCCCCCcCCCCCC-cchHHHHHHHhchhhh
Confidence 2234688899999955 4689999999988654
|
| >d1o20a_ c.82.1.1 (A:) Gamma-glutamyl phosphate reductase {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: Gamma-glutamyl phosphate reductase species: Thermotoga maritima [TaxId: 2336]
Probab=100.00 E-value=2.8e-58 Score=458.11 Aligned_cols=360 Identities=18% Similarity=0.148 Sum_probs=282.7
Q ss_pred CHHHHHHHHHhHHHHHHHHHHhcCCChHHHhhch------------HHHHHHHHHHHHHhhhhhcCcccccCCCccccee
Q 015042 1 MWKFADLIEEHVEELAALDALDAGKVYLRAKTAE------------IPGAAEFLRFFAGAADKIHGEVLKMSSELQGYTL 68 (414)
Q Consensus 1 L~~~a~~l~~~~~~l~~~~~~etGk~~~e~~~~e------------i~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~ 68 (414)
|++++++|++|+++|++++++|+||+..+. ..| +..+++.+++++.......+..............
T Consensus 29 L~k~a~~l~~~~~eia~~~~~e~gk~~~~~-~~e~~~~rl~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 107 (414)
T d1o20a_ 29 IKKIAEKLDERRKEILEANRIDVEKARERG-VKESLVDRLALNDKRIDEMIKACETVIGLKDPVGEVIDSWVREDGLRIA 107 (414)
T ss_dssp HHHHHHHHHHTHHHHHHHHHHHHHHHHHTT-CCHHHHHHHCCCHHHHHHHHHHHHHHHHSCCCTTCEEEEEECTTSCEEE
T ss_pred HHHHHHHHHHhHHHHHHHHHHHHhhHHhcc-ccHHHHHHHhccHHHHHHHHHHHHHHHHhhhhcccccccccccccccee
Confidence 578999999999999999999999998753 233 6667788888877665554444433344567788
Q ss_pred ecCCceEEEEcCCccchHHHHHhHHHHHhhCCeEEeecCCCChHHHHHHHHHHHHc----CCCCCcEEEEeCCchhhHHH
Q 015042 69 REPVGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLTALYYAHLAKLA----GIPDGVLNVVPGFGPTAGAA 144 (414)
Q Consensus 69 ~~P~Gvv~~i~p~n~P~~~~~~~~~~aLaaGN~vv~kps~~~~~~~~~l~~~l~~a----G~p~g~v~~v~~~~~~~~~~ 144 (414)
++|+|+++++.|||||+...++++++||++||+||+|||+.+|.++..+.+++.++ |+|.++++.+.+.+.+....
T Consensus 108 ~~~~gv~~~~~p~n~p~~~~~~~~~~alaaGN~vvlKps~~tp~~~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~ 187 (414)
T d1o20a_ 108 RVRVPIGPIGIIYESRPNVTVETTILALKSGNTILLRGGSDALNSNKAIVSAIREALKETEIPESSVEFIENTDRSLVLE 187 (414)
T ss_dssp EEEEECCCEEEECCSCTHHHHHHHHHHHHTTCCEEEECCGGGHHHHHHHHHHHHHHHTTSSSCGGGEEECCCCCTHHHHH
T ss_pred ecccccccccccccCcHHHhhhccchheecccchhcccccccccccchhhhHHHhhhhhccccccccccccccchhhhhh
Confidence 89999999999999999999999999999999999999999999999999987766 55556677777656555666
Q ss_pred hhhCCCccEEEEeCCcHHHHHHHHHHHhcccceeEEEcCCCC-CceEcCCCCHHHHHHHHHHHhhccCCCCcccCceEEE
Q 015042 145 ICSHMDIDYVCFTGSTDVGRLVMQAAAASNLKQVSLELGGKS-PLLIFDDADLDTAADVALLGNLYNKGEICVASSRVFV 223 (414)
Q Consensus 145 l~~~~~v~~v~~tGs~~~g~~i~~~~a~~~~~~~~~e~gg~~-~~iV~~dadl~~aa~~i~~~~~~~~Gq~C~a~~~i~V 223 (414)
+..++.+. ++||...++.+.+.++ +..+++++|+||+| ++||++|||++.|++.++.++|.+ ||.|++++|+||
T Consensus 188 ~~~~~~~~---~~~~~~~~~~v~~~a~-~~~~~~~le~gGgn~~viv~~dAd~~~A~~~~~~~~~~~-gq~C~a~~r~~V 262 (414)
T d1o20a_ 188 MIRLREYL---SLVIPRGGYGLISFVR-DNATVPVLETGVGNCHIFVDESADLKKAVPVIINAKTQR-PGTCNAAEKLLV 262 (414)
T ss_dssp HTTCTTTC---SEEEECSCHHHHHHHH-HHCSSCBCCCCCCCEEEEECTTSCHHHHHHHHHHHHHSC-TTSTTSEEEEEE
T ss_pred cccccccC---eEEEcccHHHHHHHhh-hccccceecccCCCCCeecccccchhhhhhHHHhhhhcC-Ccccccccccch
Confidence 65554433 3333444455666665 55677777777766 578889999999999999999876 999999999999
Q ss_pred eCchHHHHHHHHHHHHhhcccCCCCCCCCcccccCCHHHHHHHHHHHHHHHHcCCEEEeCCcccCCCCceeeeEEEeeCC
Q 015042 224 QEGIYDKFEKKLLEKAKAWLVGDPFDPTVRQGPQISERHFDRILSYIEHGKREGATLLTGGKPIGDKGYYIEPTIFTNVK 303 (414)
Q Consensus 224 ~~~i~d~f~~~l~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~~~g~~~~Ptvl~~~~ 303 (414)
|+++||+|++.|.+...+..++.+.++ ... . +.+.+..
T Consensus 263 ~~~i~d~f~~~l~~~~~~~~~~~~~~~----------~~~----~-------------------------~~~~~~~--- 300 (414)
T d1o20a_ 263 HEKIAKEFLPVIVEELRKHGVEVRGCE----------KTR----E-------------------------IVPDVVP--- 300 (414)
T ss_dssp EHHHHHHHHHHHHHHHHHTTCEEEECH----------HHH----H-------------------------HSTTSEE---
T ss_pred hHHHHHHHHHHHhHHHHHcCCccccch----------hhh----h-------------------------hccccee---
Confidence 999999999999999887655443221 110 0 0111111
Q ss_pred CcccccccceecceEEEEeeCCHHHHHHHhhcCCCCceEEEecCCHHHHHHHHHhcceeEEEEcCcCCCCCCCCcccCCC
Q 015042 304 EDMIIAKEEIFGPVMALMKFKTVEEAIKSANNTQYGLAAGIVTKDLNVANTVSRSIRAGIIWINCYFGFSMDCPYGGYKM 383 (414)
Q Consensus 304 ~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~sv~s~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~p~gG~~~ 383 (414)
.....+++|+||||++|++|+|+||||+++|+++|||++||||+|.+.++++++++++|.|+||+++.+....|||+-|.
T Consensus 301 ~~~~~~~~E~FgPvl~v~~~~~~dEAI~~aN~~~yGLsa~I~T~d~~~a~~~~~~i~~G~V~IN~~~~~~~~~~~g~g~~ 380 (414)
T d1o20a_ 301 ATEDDWPTEYLDLIIAIKVVKNVDEAIEHIKKYSTGHSESILTENYSNAKKFVSEIDAAAVYVNASTRFTDGGQFGFGAE 380 (414)
T ss_dssp CCGGGTTCCCCSSEEEEEEESSHHHHHHHHHHHCCSSEEEEECSCHHHHHHHHHHCCSSEEEESSCGGGCSTTTTTCSCC
T ss_pred cccccCCceeeeeEEEEEEeCCHHHHHHHHhcCCCCCcEEEEeCCHHHHHHHHHhCCeeEEEEeCCCcCCCCCCCCCCCc
Confidence 12234689999999999999999999999999999999999999999999999999999999999876555556655555
Q ss_pred CCC--Ccc--chHHHHHhhheeeEEEeeC
Q 015042 384 SGF--GRE--YGLESLYKYLQIKSVVTPI 408 (414)
Q Consensus 384 sG~--g~~--~g~~~~~~~~~~k~i~~~~ 408 (414)
+|+ |+. +|++|+++||+.|+|+.+.
T Consensus 381 ~G~~~~~~~~~G~~gl~~~t~~K~vv~~~ 409 (414)
T d1o20a_ 381 IGISTQRFHARGPVGLRELTTYKFVVLGE 409 (414)
T ss_dssp SCEECSSSSCCEECCTGGGEEEEEEEECS
T ss_pred eeccCCCCCCCchhHHHHhCeEEEEEECC
Confidence 554 333 3899999999999998754
|
| >d1vlua_ c.82.1.1 (A:) Gamma-glutamyl phosphate reductase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: Gamma-glutamyl phosphate reductase species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=100.00 E-value=2.9e-49 Score=392.70 Aligned_cols=373 Identities=17% Similarity=0.149 Sum_probs=260.0
Q ss_pred CHHHHHHHHHhHHHHHHHH------HHhcCCChHHH-h----h-chHHHHHHHHHHHHHhhhhhcCcccc---cCCCccc
Q 015042 1 MWKFADLIEEHVEELAALD------ALDAGKVYLRA-K----T-AEIPGAAEFLRFFAGAADKIHGEVLK---MSSELQG 65 (414)
Q Consensus 1 L~~~a~~l~~~~~~l~~~~------~~etGk~~~e~-~----~-~ei~~~~~~l~~~a~~~~~~~~~~~~---~~~~~~~ 65 (414)
|+++++.|++|+++|.++. +.+.|++.... + . ..+..+++.++..+...++. +.... .+.+...
T Consensus 31 L~~~a~~L~~~~~eI~~aN~~Dl~~a~~~g~~~~~idRL~l~~~~ri~~~~~~l~~i~~~~dpv-g~~~~~~~~~~gl~~ 109 (436)
T d1vlua_ 31 LYKIHDALKANAHAIEEANKIDLAVAKETGLADSLLKRLDLFKGDKFEVMLQGIKDVAELEDPV-GKVKMARELDDGLTL 109 (436)
T ss_dssp HHHHHHHHHHTHHHHHHHHHHHHHHHHHSSCCHHHHHHHCTTSTTHHHHHHHHHHHHHHSCCSS-SCEEEEEEEETTEEE
T ss_pred HHHHHHHHHHCHHHHHHHHHHHHHHHHHcCCcHHHHHHHhcCchHHHHHHHHHHHHHHhccccc-eeEeeeeeccccceE
Confidence 5789999999999998854 44556653311 1 1 13566666677666544432 32222 2345667
Q ss_pred ceeecCCceEEEEcCCccchHHHHHhHHHHHhhCCeEEeecCCCChHHHHHHHHHH--------HHcCCCCCcEEEEeCC
Q 015042 66 YTLREPVGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLTALYYAHLA--------KLAGIPDGVLNVVPGF 137 (414)
Q Consensus 66 ~~~~~P~Gvv~~i~p~n~P~~~~~~~~~~aLaaGN~vv~kps~~~~~~~~~l~~~l--------~~aG~p~g~v~~v~~~ 137 (414)
+..+.|+||+++| |+++| ..++...+.||++||+||+||++.++.|+..+.+++ .++|+|+++++++++
T Consensus 110 ~~~~~P~GVigiI-~e~~P-~vt~~~~~lalksGNavIlk~~~~a~~s~~~l~~~~~~al~~a~~~aGlP~~~i~~v~~- 186 (436)
T d1vlua_ 110 YQVTAPVGVLLVI-FESRP-EVIANITALSIKSGNAAILKGGKESVNTFREMAKIVNDTIAQFQSETGVPVGSVQLIET- 186 (436)
T ss_dssp EEEEEECCEEEEE-ESSCT-HHHHHHHHHHHHHTCEEEEECCGGGHHHHHHHHHHHHHHHHHHHHHHCCCTTSEEECCC-
T ss_pred EEeeeeeeeeecc-ccccc-hhhhhhhhcccccCCcceecCCcccccCHHHHHHHHHHhhhhhccccCCCCceEEEecc-
Confidence 7888999999998 66777 667788899999999999999999999988876665 467999999999987
Q ss_pred chhhHHHhhhCCCccEEEEeCCcHHHHHHHHHHHhcccceeEEEcCCCCCceEcCCCCHHHHHHHHHHHhhccCCCCccc
Q 015042 138 GPTAGAAICSHMDIDYVCFTGSTDVGRLVMQAAAASNLKQVSLELGGKSPLLIFDDADLDTAADVALLGNLYNKGEICVA 217 (414)
Q Consensus 138 ~~~~~~~l~~~~~v~~v~~tGs~~~g~~i~~~~a~~~~~~~~~e~gg~~~~iV~~dadl~~aa~~i~~~~~~~~Gq~C~a 217 (414)
+.++++.|..|++||.|+||||...++.+.+.+ ..|++.+++|++|+||++|||++.|++.++.++|+++|| |++
T Consensus 187 ~~~v~~~l~~~~~Id~ii~tGg~~lv~~v~~~~----~~pvi~~~~G~~~~~Vd~~ADl~~A~~~i~~ak~~~~g~-C~a 261 (436)
T d1vlua_ 187 RQDVSDLLDQDEYIDLVVPRGSNALVRKIKDTT----KIPVLGHADGICSIYLDEDADLIKAKRISLDAKTNYPAG-CNA 261 (436)
T ss_dssp C--CGGGGGCTTTCCEEEEESCHHHHHHHHHTC----CSCBTTBCSCCEEEEECTTCCHHHHHHHHHHTTCC-----CCC
T ss_pred hhHHHHHhccCCCCceEEEecCCceeeeeeccc----cceEEEecCCccceeecccccHHHHHHHHHHHhccCCCc-ccc
Confidence 557889999999999999999999888776543 369999999999999999999999999999999999996 899
Q ss_pred CceEEEeCchHHHHHHHHHHHHhhcccCCCCCCCCcccccCCHHHHHHHHHHHHHHHHcCCEEEeCCcccCCCCceeeeE
Q 015042 218 SSRVFVQEGIYDKFEKKLLEKAKAWLVGDPFDPTVRQGPQISERHFDRILSYIEHGKREGATLLTGGKPIGDKGYYIEPT 297 (414)
Q Consensus 218 ~~~i~V~~~i~d~f~~~l~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~~~g~~~~Pt 297 (414)
.++++||+++++.|...+....+. |. .+. ...... ....+..... +. ..+....|+
T Consensus 262 ~e~llV~e~ia~~~~~~~~~~~~~---gv------~l~--~~~~~~----~~~~~~~~~~------~~---~~~~~~~~~ 317 (436)
T d1vlua_ 262 METLLINPKFSKWWEVLENLTLEG---GV------TIH--ATKDLK----TAYFDKLNEL------GK---LTEAIQCKT 317 (436)
T ss_dssp CEEEEECTTSTTHHHHHHHHHHHH---CC------CBE--ECHHHH----HHHHHHHHHH------TC---CCHHHHTTB
T ss_pred ccceeecHhhhhhhhhhHHHHHhC---Cc------EEE--eCHHHH----HHhhhhhhhc------cc---ccccccccc
Confidence 999999999998886655444433 11 110 012221 1221111111 00 012223333
Q ss_pred EEeeCCCcccccccceecceEEEEeeCCHHHHHHHhhcCCCCceEEEecCCHHHHHHHHHhcceeEEEEcCcCCCCCCCC
Q 015042 298 IFTNVKEDMIIAKEEIFGPVMALMKFKTVEEAIKSANNTQYGLAAGIVTKDLNVANTVSRSIRAGIIWINCYFGFSMDCP 377 (414)
Q Consensus 298 vl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~sv~s~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~p 377 (414)
+....+.+ +.+|.|+|++.|++|+|+||||+++|+.++||+++|||+|.+.+++|++++++|.|+||.++.+..+.+
T Consensus 318 ~~~~~~~d---~~~E~l~pvl~v~~v~~~eEAI~~in~~g~ghta~I~T~d~~~a~~F~~~vda~~V~vNasTrf~Dg~~ 394 (436)
T d1vlua_ 318 VDADEEQD---FDKEFLSLDLAAKFVTSTESAIQHINTHSSRHTDAIVTENKANAEKFMKGVDSSGVYWNASTRFADGFR 394 (436)
T ss_dssp C----------------CCCCEEEECCSHHHHHHHHTTSCSSCEEEEECSCHHHHHHHHHHCCCSEEEESSCGGGCC---
T ss_pred cCCCcccc---hhhhhhCcceeEEEECCHHHHHHHHHHhCCCCceEEEECCHHHHHHHHHhCCceEEEEcCCCccCCCCc
Confidence 33222222 579999999999999999999999999999999999999999999999999999999999999877777
Q ss_pred cccC---CCC-CCCccchHHHHHhhheeeEEEeeCC
Q 015042 378 YGGY---KMS-GFGREYGLESLYKYLQIKSVVTPIY 409 (414)
Q Consensus 378 ~gG~---~~s-G~g~~~g~~~~~~~~~~k~i~~~~~ 409 (414)
||-- |.| +-....|+.|++++|..|.++...+
T Consensus 395 ~g~g~e~Gist~k~h~rGp~gl~~ltt~k~~~~g~g 430 (436)
T d1vlua_ 395 YGFGAEVGISTSKIHARGPVGLDGLVSYQYQIRGDG 430 (436)
T ss_dssp -------------------CCSGGGEEEEEEEECSS
T ss_pred ccCcceeeEecCCCCCCCCcChHHhceEEEEEECCC
Confidence 7621 222 2223578999999999999987654
|
| >d1k75a_ c.82.1.2 (A:) L-histidinol dehydrogenase HisD {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: L-histidinol dehydrogenase HisD domain: L-histidinol dehydrogenase HisD species: Escherichia coli [TaxId: 562]
Probab=97.78 E-value=0.0058 Score=57.26 Aligned_cols=258 Identities=18% Similarity=0.158 Sum_probs=154.4
Q ss_pred CCcccceeecCCceEEEEcCCc---cchHHHHHhHHHHHhhCCeEE--eecCCCChHHHHHHHHHHHHcCCCCCcEEEEe
Q 015042 61 SELQGYTLREPVGVVGHIIPWN---FPTTMFFMKVSPALAAGCTMI--VKPAEQTPLTALYYAHLAKLAGIPDGVLNVVP 135 (414)
Q Consensus 61 ~~~~~~~~~~P~Gvv~~i~p~n---~P~~~~~~~~~~aLaaGN~vv--~kps~~~~~~~~~l~~~l~~aG~p~g~v~~v~ 135 (414)
.|.....++.|+--|++..|.- ||. ++++..+||-.+|..=| ..|+...|. +.-+...+|+. .+..
T Consensus 110 ~Gv~~g~~~~PI~~VGlYVPGG~A~ypS-svLM~aiPAkvAGV~~Ivv~tPp~~~~~----~l~aa~~~Gv~----~iy~ 180 (431)
T d1k75a_ 110 PGVRCQQVTRPVASVGLYIPGGSAPLFS-TVLMLATPASIAGCKKVVLCSPPPIADE----ILYAAQLCGVQ----DVFN 180 (431)
T ss_dssp TTEEEEEEEEECSEEEEECCCSSSCCHH-HHHHHHHHHHHHTCSEEEEEECSSCCHH----HHHHHHHTTCC----EEEE
T ss_pred CCceeeeeeeehhhheeeccCCCccchH-HHHHHHHHHHhcCCCceeEEeCCCCcch----HHHHHHHcCcc----ceEe
Confidence 5666778888999999999966 665 44456889999997654 455544443 22333455555 3333
Q ss_pred CCchhhHHHhhh----CCCccEEEEeCCcHHHHHHHHHHHhcccceeEEEcCCCC--CceEcCCCCHHHHHHHHHHHhhc
Q 015042 136 GFGPTAGAAICS----HMDIDYVCFTGSTDVGRLVMQAAAASNLKQVSLELGGKS--PLLIFDDADLDTAADVALLGNLY 209 (414)
Q Consensus 136 ~~~~~~~~~l~~----~~~v~~v~~tGs~~~g~~i~~~~a~~~~~~~~~e~gg~~--~~iV~~dadl~~aa~~i~~~~~~ 209 (414)
-.|.....+|.- -|+||.|+=.|+.-+...=.+... ....--+=-..|-+ -+|-++++|.+.+|..++.-+=+
T Consensus 181 ~GGaqAIAAlAyGT~ti~~VdkI~GPGN~yV~~AK~~v~g-~~~~vgID~~aGPSEv~viAD~~a~p~~iAaDllaQAEH 259 (431)
T d1k75a_ 181 VGGAQAIAALAFGTESVPKVDKIFGPGNAFVTEAKRQVSQ-RLDGAAIDMPAGPSEVLVIADSGATPDFVASDLLSQAEH 259 (431)
T ss_dssp CCHHHHHHHHHHCCSSSCCCSEEECCCSHHHHHHHHHHHH-STTSCEESCCCCCCEEEEEECTTSCHHHHHHHHHHHHTT
T ss_pred cCChHHHHHHhhccCcccccceeecCCchhhhhhHHhhcc-cCCccccccccCCceEEEEecCCCCHHHHHHHHHhccCC
Confidence 335555555543 578999999998865432222221 10000011112322 34556678999999888877666
Q ss_pred cCCCCcccCceEEEeCc--hHHHHHHHHHHHHhhcccCCCCCCCCcccccCCHHHHHHHHHHHHHHHHcCCEEEeCCccc
Q 015042 210 NKGEICVASSRVFVQEG--IYDKFEKKLLEKAKAWLVGDPFDPTVRQGPQISERHFDRILSYIEHGKREGATLLTGGKPI 287 (414)
Q Consensus 210 ~~Gq~C~a~~~i~V~~~--i~d~f~~~l~~~~~~~~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ga~v~~gg~~~ 287 (414)
... .+.++|..+ ..++..+.+.++++.+ |. .. .++....
T Consensus 260 ~~~-----a~~ilvt~~~~l~~~v~~~i~~~l~~l----~r-----------~~-------i~~~s~~------------ 300 (431)
T d1k75a_ 260 GPD-----SQVILLTPAADMARRVAEAVERQLAEL----PR-----------AE-------TARQALN------------ 300 (431)
T ss_dssp CTT-----CEEEEEESCHHHHHHHHHHHHHHHHTC----SS-----------CH-------HHHHHHT------------
T ss_pred ccc-----ceeEEEeccHHHHHHHHHHHHHHhhhc----hH-----------HH-------HHHhhhc------------
Confidence 554 345677655 3455555555544432 10 00 1111111
Q ss_pred CCCCceeeeEEEeeCCCcccccccceecceEEEEeeCCHHHHHHHhhcCCCCceEEEecCCHHHHHHHHHhc-ceeEEEE
Q 015042 288 GDKGYYIEPTIFTNVKEDMIIAKEEIFGPVMALMKFKTVEEAIKSANNTQYGLAAGIVTKDLNVANTVSRSI-RAGIIWI 366 (414)
Q Consensus 288 ~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~sv~s~d~~~~~~~~~~l-~~g~v~i 366 (414)
.. .++.++|++||++++|..-.= ...|.++|++ ++...+ ++|.|++
T Consensus 301 -------------------------~~----~ii~v~~~~ea~~~~N~~APE-HL~l~~~~~~---~~~~~i~nAGsIfl 347 (431)
T d1k75a_ 301 -------------------------AS----RLIVTKDLAQCVEISNQYGPE-HLIIQTRNAR---ELVDSITSAGSVFL 347 (431)
T ss_dssp -------------------------TC----EEEECSSHHHHHHHHHHHCCS-EEEEESTTHH---HHGGGCCCCSEEEE
T ss_pred -------------------------cc----eEEEecCHHHHHHHHHhhhHH-HHHHHhcCHH---HHHhhhhhcchhhc
Confidence 11 144679999999999985322 4678888874 466666 5999999
Q ss_pred cCcCC---------CCCCCCcccCCCCCCCccchHHHHHhhheeeEEE
Q 015042 367 NCYFG---------FSMDCPYGGYKMSGFGREYGLESLYKYLQIKSVV 405 (414)
Q Consensus 367 N~~~~---------~~~~~p~gG~~~sG~g~~~g~~~~~~~~~~k~i~ 405 (414)
..++. .++-+|-|| .+++.+.-++..|+.+.++.
T Consensus 348 G~~sp~a~GDY~aGpnHvLPT~G-----~Ar~~sgLsv~dF~k~~s~~ 390 (431)
T d1k75a_ 348 GDWSPESAGDYASGTNHVLPTYG-----YTATCSSLGLADFQKRMTVQ 390 (431)
T ss_dssp STTCCHHHHHHTSSSCCCCCCTT-----GGGTCCCCCGGGGEEEEEEE
T ss_pred CCCCcchhhccccCCCccCCCCC-----ceeecCCCCHHHeeeeeeEE
Confidence 98754 345677765 45555566688898887764
|