Citrus Sinensis ID: 015168

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410--
Protein Sequence
MGFFSKLILIVGGPLVGKLMDHSPRIPAYICLNTVQAAAQLLSAAMIIHAHTVIPTSSSMLLHPWFFVLVLAGAVERLTGVALGVAVERDWAVLLAGINRPIALAKANAVLNRIDLLCEIAGASLFGILLSKYEPVTCLKFAAGLIMWSLPVMIILTWFTNKISSGVLDRAKCSQSCCRTSNEGPVPDADNIVDVGIEAIKLGWKEYMQQPVLPASLAYVLLCLNVVLTPGSLMTAFLTQRGLNPSIIGGFSGLCASMGVAATFLSAYLVRRLGILKAGAAGLIFQASLLAMAVAVYWSGSLSQQNPLLFFLCLIVLSRLGHMSYDIVGAQILQTGIPSSKANLIGTTEISVASLVESVMLGVAIIANDVSHFGFLATLSLLSVVGAAWMFCHWLLNPTDEQRSLFSFDPQS
Secondary Structure (PSIPRED)
ccHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHccccccccccccccccccHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHccccHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccc
Secondary Structure Prediction (SSPRO)
ccHHHHHHHEEEcHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHEHEccEEEEEcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHcccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHcccHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHccccHHHHHHHHHHHHHHHHHHHHHcccHHHHcHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHccccccc
Coil and Loop (DISEMBL)
MGFFSKLILIVGgplvgklmdhspripayICLNTVQAAAQLLSAAMIIHAHtviptsssmllhpWFFVLVLAGAVERLTGVALGVAVERDWAVLLAGINRPIALAKANAVLNRIDLLCEIAGASLFGILLSKYEPVTCLKFAAGLIMWSLPVMIILTWFTNKissgvldrakcsqsccrtsnegpvpdadnivDVGIEAIKLGWKeymqqpvlpaSLAYVLLCLNVVLTPGSLMTAFLTqrglnpsiiggFSGLCASMGVAATFLSAYLVRRLGILKAGAAGLIFQASLLAMAVAVYWsgslsqqnpLLFFLCLIVLSRLGHMSYDIVGAQILqtgipsskanligtTEISVASLVESVMLGVAIIANDVSHFGFLATLSLLSVVGAAWMFCHWllnptdeqrslfsfdpqs
Flexible Loop (DISEMBL)
MGFFSKLILIVGGPLVGKLMDHSPRIPAYICLNTVQAAAQLLSAAMIIHAHTVIPTSSSMLLHPWFFVLVLAGAVERLTGVALGVAVERDWAVLLAGINRPIALAKANAVLNRIDLLCEIAGASLFGILLSKYEPVTCLKFAAGLIMWSLPVMIILTWFTNKISSGVLDRAKCSQSCCRtsnegpvpdadnivDVGIEAIKLGWKEYMQQPVLPASLAYVLLCLNVVLTPGSLMTAFLTQRGLNPSIIGGFSGLCASMGVAATFLSAYLVRRLGILKAGAAGLIFQASLLAMAVAVYWSGSLSQQNPLLFFLCLIVLSRLGHMSYDIVGAQILQTGIPSSKANLIGTTEISVASLVESVMLGVAIIANDVSHFGFLATLSLLSVVGAAWMFCHWLLNPTDEQRSLFSFDPQS
Low Complexity Region (SEG)
MGFFSKLILIVGGPLVGKLMDHSPRIPAYICLNTVQAAAQLLSAAMIIHAHTVIPTSSSMLLHPWFFVLVLAGAVERLTGVALGVAVERDWAVLLAGINRPIALAKANAVLNRIDLLCEIAGASLFGILLSKYEPVTCLKFAAGLIMWSLPVMIILTWFTNKISSGVLDRAKCSQSCCRTSNEGPVPDADNIVDVGIEAIKLGWKEYMQQPVLPASLAYVLLCLNVVLTPGSLMTAFLTQRGLNPSIIGGFSGLCASMGVAATFLSAYLVRRLGILKAGAAGLIFQASLLAMAVAVYWSGSLSQQNPLLFFLCLIVLSRLGHMSYDIVGAQILQTGIPSSKANLIGTTEISVASLVESVMLGVAIIANDVSHFGFLATLSLLSVVGAAWMFCHWLLNPTDEQRSLFSFDPQS
Disordered region (IsUnstruct)
**FFSKLILIVGGPLVGKLMDHSPRIPAYICLNTVQAAAQLLSAAMIIHAHTVIPTSSSMLLHPWFFVLVLAGAVERLTGVALGVAVERDWAVLLAGINRPIALAKANAVLNRIDLLCEIAGASLFGILLSKYEPVTCLKFAAGLIMWSLPVMIILTWFTNKISSGVLDRAKCSQSCCRTSNEGPVPDADNIVDVGIEAIKLGWKEYMQQPVLPASLAYVLLCLNVVLTPGSLMTAFLTQRGLNPSIIGGFSGLCASMGVAATFLSAYLVRRLGILKAGAAGLIFQASLLAMAVAVYWSGSLSQQNPLLFFLCLIVLSRLGHMSYDIVGAQILQTGIPSSKANLIGTTEISVASLVESVMLGVAIIANDVSHFGFLATLSLLSVVGAAWMFCHWLLNP**************
Disordered Region (DISOPRED)
MGFFSKLILIVGGPLVGKLMDHSPRIPAYICLNTVQAAAQLLSAAMIIHAHTVIPTSSSMLLHPWFFVLVLAGAVERLTGVALGVAVERDWAVLLAGINRPIALAKANAVLNRIDLLCEIAGASLFGILLSKYEPVTCLKFAAGLIMWSLPVMIILTWFTNKIS*******************************GIEAIKLGWKEYMQQPVLPASLAYVLLCLNVVLTPGSLMTAFLTQRGLNPSIIGGFSGLCASMGVAATFLSAYLVRRLGILKAGAAGLIFQASLLAMAVAVYWSGSLSQQNPLLFFLCLIVLSRLGHMSYDIVGAQILQTGIPSSKANLIGTTEISVASLVESVMLGVAIIANDVSHFGFLATLSLLSVVGAAWMFCHWLLNPTDEQRSLF******
Disordered Region (DISEMBL)
MGFFSKLILIVGGPLVGKLMDHSPRIPAYICLNTVQAAAQLLSAAMIIHAHTVIPTSSSMLLHPWFFVLVLAGAVERLTGVALGVAVERDWAVLLAGINRPIALAKANAVLNRIDLLCEIAGASLFGILLSKYEPVTCLKFAAGLIMWSLPVMIILTWFTNKISSGVLDRAKCSQSCCRTSNEGPVPDADNIVDVGIEAIKLGWKEYMQQPVLPASLAYVLLCLNVVLTPGSLMTAFLTQRGLNPSIIGGFSGLCASMGVAATFLSAYLVRRLGILKAGAAGLIFQASLLAMAVAVYWSGSLSQQNPLLFFLCLIVLSRLGHMSYDIVGAQILQTGIPSSKANLIGTTEISVASLVESVMLGVAIIANDVSHFGFLATLSLLSVVGAAWMFCHWLLNPTDEQR*********
Disordered Region (DISPRO)
MGFFSKLILIVGGPLVGKLMDHSPRIPAYICLNTVQAAAQLLSAAMIIHAHTVIPTSSSMLLHPWFFVLVLAGAVERLTGVALGVAVERDWAVLLAGINRPIALAKANAVLNRIDLLCEIAGASLFGILLSKYEPVTCLKFAAGLIMWSLPVMIILTWFTNKISSGVLD*******************ADNIVDVGIEAIKLGWKEYMQQPVLPASLAYVLLCLNVVLTPGSLMTAFLTQRGLNPSIIGGFSGLCASMGVAATFLSAYLVRRLGILKAGAAGLIFQASLLAMAVAVYWSGSLSQQNPLLFFLCLIVLSRLGHMSYDIVGAQILQTGIPSSKANLIGTTEISVASLVESVMLGVAIIANDVSHFGFLATLSLLSVVGAAWMFCHWLLNPTDEQRSLFSF****
Transmembrane Helix (TMHMM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiii
Transmembrane Helix (HMMTOP)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHooooooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiii
Transmembrane Helix (MEMSAT)
ooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHooooooHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHoooooooooHHHHHHHHHHHHHHHHHHHHHHHHiiiHHHHHHHHHHHHHHHHHHHHHHHHHoooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHoooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHoooHHHHHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHoooooooHHHHHHHHHHHHHHHHHHHHHiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHoooooooooHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
iiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHoooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHoooooooooooHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHoooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHoooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiii
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MGFFSKLILIVGGPLVGKLMDHSPRIPAYICLNTVQAAAQLLSAAMIIHAHTVIPTSSSMLLHPWFFVLVLAGAVERLTGVALGVAVERDWAVLLAGINRPIALAKANAVLNRIDLLCEIAGASLFGILLSKYEPVTCLKFAAGLIMWSLPVMIILTWFTNKISSGVLDRAKCSQSCCRTSNEGPVPDADNIVDVGIEAIKLGWKEYMQQPVLPASLAYVLLCLNVVLTPGSLMTAFLTQRGLNPSIIGGFSGLCASMGVAATFLSAYLVRRLGILKAGAAGLIFQASLLAMAVAVYWSGSLSQQNPLLFFLCLIVLSRLGHMSYDIVGAQILQTGIPSSKANLIGTTEISVASLVESVMLGVAIIANDVSHFGFLATLSLLSVVGAAWMFCHWLLNPTDEQRSLFSFDPQS
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	412	2.2.26 [Sep-21-2011]
Q8W4E7	598	Solute carrier family 40	yes	no	0.995	0.685	0.750	1e-174
Q2QNK7	591	Solute carrier family 40	yes	no	0.985	0.686	0.626	1e-146
B9FGV7	593	Solute carrier family 40	no	no	0.978	0.679	0.512	1e-112
Q5Z922	484	Solute carrier family 40	no	no	0.944	0.803	0.263	1e-17
F4KGN5	512	Solute carrier family 40	no	no	0.881	0.708	0.232	2e-15
O80905	524	Solute carrier family 40	no	no	0.876	0.688	0.246	4e-15
Q9I9R3	562	Solute carrier family 40	yes	no	0.890	0.653	0.211	2e-12
Q9NP59	571	Solute carrier family 40	yes	no	0.706	0.509	0.223	4e-12
Q923U9	570	Solute carrier family 40	yes	no	0.706	0.510	0.229	2e-11
Q9JHI9	570	Solute carrier family 40	yes	no	0.706	0.510	0.229	3e-11

>sp|Q8W4E7|S40A3_ARATH Solute carrier family 40 member 3, chloroplastic OS=Arabidopsis thaliana GN=IREG3 PE=1 SV=1

 Score =  610 bits (1574), Expect = e-174,   Method: Compositional matrix adjust.
 Identities = 310/413 (75%), Positives = 348/413 (84%), Gaps = 3/413 (0%)

Query: 1   MGFFSKLILIVGGPLVGKLMDHSPRIPAYICLNTVQAAAQLLSAAMIIHAHTVIPTS-SS 59
           MGF +KL +I GGP+VGK MD+SPR+P YI LN +QAAAQ+LSA MIIHA+TV  TS SS
Sbjct: 187 MGFVTKLAIIAGGPVVGKFMDYSPRVPTYISLNVIQAAAQVLSAGMIIHAYTVPSTSASS 246

Query: 60  MLLHPWFFVLVLAGAVERLTGVALGVAVERDWAVLLAGINRPIALAKANAVLNRIDLLCE 119
           +LL PWFF L+ AGA++ L G+A GVA+ERDW VLLAGINRPIALA+ANAVL+RIDLLCE
Sbjct: 247 ILLQPWFFALLFAGAIDSLCGIASGVAIERDWVVLLAGINRPIALAQANAVLHRIDLLCE 306

Query: 120 IAGASLFGILLSKYEPVTCLKFAAGLIMWSLPVMIILTWFTNKISSGVLDRAKCSQSCCR 179
           IAG  LFGILLSKY+PVTCLKFAA L++ SLP M  L W TNK SSGVLDR KCS + C 
Sbjct: 307 IAGTMLFGILLSKYDPVTCLKFAATLMVGSLPTMTALIWLTNKFSSGVLDRPKCSLNSC- 365

Query: 180 TSNEGPVPDADNIVDVGIEAIKLGWKEYMQQPVLPASLAYVLLCLNVVLTPGSLMTAFLT 239
            S EG   + D+I D+G+E IKLGWKEY+QQPVLPASLAYVLL  N+VLTPGSLMTAFLT
Sbjct: 366 -SAEGSRTNTDSIFDIGMETIKLGWKEYIQQPVLPASLAYVLLYFNIVLTPGSLMTAFLT 424

Query: 240 QRGLNPSIIGGFSGLCASMGVAATFLSAYLVRRLGILKAGAAGLIFQASLLAMAVAVYWS 299
           QR +NPS+IGGFSGLCA MGVAATFLSA LV+R+GILKAGA GL FQASLLA+AVAVY S
Sbjct: 425 QRCVNPSVIGGFSGLCAVMGVAATFLSANLVKRVGILKAGAVGLFFQASLLAVAVAVYCS 484

Query: 300 GSLSQQNPLLFFLCLIVLSRLGHMSYDIVGAQILQTGIPSSKANLIGTTEISVASLVESV 359
            SLS ++PL FFL +IVLSRLGHMSY +VGAQILQTGIPSSKANLIG TEISVASL ES+
Sbjct: 485 SSLSHKSPLFFFLSMIVLSRLGHMSYGVVGAQILQTGIPSSKANLIGATEISVASLAESL 544

Query: 360 MLGVAIIANDVSHFGFLATLSLLSVVGAAWMFCHWLLNPTDEQRSLFSFDPQS 412
           MLGVAI AND SHFGFLA LSLLSVV A+ +FC  L NPTDEQR LFSFDP S
Sbjct: 545 MLGVAIAANDASHFGFLAVLSLLSVVAASLIFCRLLRNPTDEQRRLFSFDPLS 597

Probable plastid transporter that may play a role in iron chelation, storage or sequestration under limiting iron conditions. In presence of exogenous antibiotics, may allow opportunistic entry of multiple aminoglycoside antibiotics into the chloroplast.
Arabidopsis thaliana (taxid: 3702)

>sp|Q2QNK7|S40A2_ORYSJ Solute carrier family 40 member 2, chloroplastic OS=Oryza sativa subsp. japonica GN=Os12g0562100 PE=2 SV=1

 Score =  518 bits (1334), Expect = e-146,   Method: Compositional matrix adjust.
 Identities = 260/415 (62%), Positives = 318/415 (76%), Gaps = 9/415 (2%)

Query: 1   MGFFSKLILIVGGPLVGKLMDHSPRIPAYICLNTVQAAAQLLSAAMIIHA--HTVIPTSS 58
           +GFF+KL + +G P+VGKLMDH PRIP Y  LN VQ A QL+SAAM+I+A  +    ++S
Sbjct: 176 VGFFTKLSVFIGAPIVGKLMDHFPRIPMYTGLNAVQVATQLISAAMVIYAMKNVTHASTS 235

Query: 59  SMLLHPWFFVLVLAGAVERLTGVALGVAVERDWAVLLAGINRPIALAKANAVLNRIDLLC 118
           +++L PWF  LV AGA+ERL G+ALGVA+ERDW VLLAG NRP+ALA+ANAVLNR+DL+C
Sbjct: 236 AVVLKPWFIALVAAGAIERLAGLALGVAMERDWVVLLAGTNRPVALAQANAVLNRLDLVC 295

Query: 119 EIAGASLFGILLSKYEPVTCLKFAAGLIMWSLPVMIILTWFTNKISSGVLD--RAKCSQS 176
           E  GAS+FG+LLSKY PVTCLK A GL++ S PV+++L    N+ S   LD  R    +S
Sbjct: 296 ETVGASVFGLLLSKYHPVTCLKIACGLMICSFPVLVVLGQLINRFSCHALDSSRTPSEES 355

Query: 177 CCRTSNEGPVPDADNIVDVGIEAIKLGWKEYMQQPVLPASLAYVLLCLNVVLTPGSLMTA 236
            C       + D   IV  G+ AI+ GW EY QQ VLPAS+A V L  NV L PG++MTA
Sbjct: 356 ICAN-----LLDVRKIVQNGLSAIRNGWNEYKQQTVLPASVATVFLNFNVALAPGAIMTA 410

Query: 237 FLTQRGLNPSIIGGFSGLCASMGVAATFLSAYLVRRLGILKAGAAGLIFQASLLAMAVAV 296
            L  RG++PSI+G FSGLC+ MG+ ATF+S+ LV R+GILKAGAAGLI QASLL++A+ V
Sbjct: 411 LLMHRGISPSIVGAFSGLCSIMGLVATFISSSLVERVGILKAGAAGLIVQASLLSVALVV 470

Query: 297 YWSGSLSQQNPLLFFLCLIVLSRLGHMSYDIVGAQILQTGIPSSKANLIGTTEISVASLV 356
           YW+GS+SQ+ PLL FL  I LSRLGHMSYD+VG QILQTG+P+SKANLIG  E+S++SL 
Sbjct: 471 YWTGSISQRTPLLIFLAAIALSRLGHMSYDVVGTQILQTGVPASKANLIGGMEVSISSLA 530

Query: 357 ESVMLGVAIIANDVSHFGFLATLSLLSVVGAAWMFCHWLLNPTDEQRSLFSFDPQ 411
           E VMLG+AIIANDVSHFGFLA LS+ SV GAAWMFC WL NPTDEQR LF FDP 
Sbjct: 531 ELVMLGMAIIANDVSHFGFLAILSVSSVAGAAWMFCQWLGNPTDEQRELFMFDPH 585

May be involved in iron transport and iron homeostasis.

Oryza sativa subsp. japonica (taxid: 39947)

>sp|B9FGV7|S40A3_ORYSJ Solute carrier family 40 member 3, chloroplastic OS=Oryza sativa subsp. japonica GN=Os05g0131500 PE=3 SV=1

 Score =  405 bits (1040), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 209/408 (51%), Positives = 284/408 (69%), Gaps = 5/408 (1%)

Query: 1   MGFFSKLILIVGGPLVGKLMDHSPRIPAYICLNTVQAAAQLLSAAMIIHAHTVIPTSS-S 59
           +GFF+KL++   GPLVG+L+   PRIPAY  L  +Q AA L+S A I +A  V   ++ S
Sbjct: 187 LGFFTKLVVFAAGPLVGELISSLPRIPAYRSLAAIQTAAHLVSVATITYAFAVHRAAAAS 246

Query: 60  MLLHPWFFVLVLAGAVERLTGVALGVAVERDWAVLLAGINRPIALAKANAVLNRIDLLCE 119
           +LL PWF VLV + AV+RL  VALG+  ERD+ V LAG  RP+ALAKANA L+R+DLLCE
Sbjct: 247 LLLRPWFAVLVASTAVDRLACVALGIIAERDFVVQLAGAGRPVALAKANATLSRVDLLCE 306

Query: 120 IAGASLFGILLSKYEPVTCLKFAAGLIMWSLPVMIILTWFTNKISSGVLDRAKCSQSCCR 179
             GAS+F +LLSK  P+TC+K +  + + +LP++I L    N+++ G+ D ++ + S   
Sbjct: 307 TVGASIFALLLSKNNPLTCIKLSCVISLCALPLLIFLCGEMNRLADGIFDHSENTTSHAE 366

Query: 180 TSNEGPVPDADNIVDVGIEAIKLGWKEYMQQPVLPASLAYVLLCLNVVLTPGSLMTAFLT 239
            ++   +      V+  +  ++ GW EYM+QPVLPASLAYV +C NV L PG+LMT FL 
Sbjct: 367 KTSSFSI---RKTVEEAVATVRNGWSEYMRQPVLPASLAYVFVCFNVALAPGALMTTFLI 423

Query: 240 QRGLNPSIIGGFSGLCASMGVAATFLSAYLVRRLGILKAGAAGLIFQASLLAMAVAVYWS 299
            +G+ PS+IG F G   ++G+ ATF +A LV+ LGILKAGAAGLI Q++LL  AV VY +
Sbjct: 424 HQGVRPSVIGAFGGSSGAVGILATFATARLVKELGILKAGAAGLIAQSALLGAAVVVYLT 483

Query: 300 GSLSQQNPLLF-FLCLIVLSRLGHMSYDIVGAQILQTGIPSSKANLIGTTEISVASLVES 358
           G++S++   LF FL LIV SR GHM+Y  +G Q++QTG P+SKA LIG TEI+VASL E 
Sbjct: 484 GAVSRRAGALFAFLGLIVASRAGHMAYSAIGLQVVQTGNPASKAKLIGATEIAVASLAEL 543

Query: 359 VMLGVAIIANDVSHFGFLATLSLLSVVGAAWMFCHWLLNPTDEQRSLF 406
            M+ VA++A+D SHFG LA LS  +V  AA M+C WL NP+DE R +F
Sbjct: 544 AMMAVAVVASDASHFGALAALSATAVTAAAGMYCRWLANPSDELRRIF 591

May be involved in iron transport and iron homeostasis.

Oryza sativa subsp. japonica (taxid: 39947)

>sp|Q5Z922|S40A1_ORYSJ Solute carrier family 40 member 1 OS=Oryza sativa subsp. japonica GN=Os06g0560000 PE=2 SV=1

 Score = 91.3 bits (225), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 107/406 (26%), Positives = 187/406 (46%), Gaps = 17/406 (4%)

Query: 13  GPLVGKLMDHSPRIPAYICLNTVQAAAQLLSAAMIIHAHTVIPTSSSMLLHPWFFVLVL- 71
           GP+VG ++D    +        +Q A+  ++A + + A  V     +    P F  LV+ 
Sbjct: 75  GPIVGAVVDRLAYLQVLRLWLLLQGAS-FVAAGVSVTALLVYGARLAAAGFPAFVALVVV 133

Query: 72  ---AGAVERLTGVALGVAVERDWAVLLAGINRPIALAKANAVLNRIDLLCEIAGASLFGI 128
              +GA+  L+ +A  + +ER+W V++AG      L   N+V+ RIDL C++    L G 
Sbjct: 134 TNVSGALAALSTLAGTILIEREWVVVIAGGQPAAVLTGINSVIRRIDLSCKLLAPVLSGF 193

Query: 129 LLSKYEPVTCLKFAAGLIMWSLPVMIILTWFTNKISSGVLDRAKCSQSCCRTSNEGPV-- 186
            +S    V+    AA L  W+L  + +  W    + +G    ++ SQ   R +++     
Sbjct: 194 FISF---VSMEASAAALAAWNLAAVWVQYWLFVSVYAGFPALSETSQISRRRADDDEAAA 250

Query: 187 ---PDADNIVDVGIEAIKLGWKEYMQQPVLPASLAYVLLCLNVVLTPGSLMTAFLTQRGL 243
              P     + + +      W  Y +Q V+   +A   L   V L+ G+LMTA L   G+
Sbjct: 251 AAQPQKVERLWMTMLPCWESWAVYARQEVVLPGVALAFLYFTV-LSFGTLMTATLDWEGI 309

Query: 244 NPSIIGGFSGLCASMGVAATFLSAYLVRRLGILKAGAAGLIFQASLLAMAVAVYWSGSLS 303
              +I    G+ A++G+AAT++      R+  L+AG   +  Q   L + VA  W+G  +
Sbjct: 310 PAYVISLARGVSAAVGIAATWVYPAAHARVSTLRAGLWSIWAQWCCLLVCVASVWAGGAA 369

Query: 304 QQNPLLFFLCLIVLSRLGHMSYDIVGAQILQTGIPSSKANLIGTTEISVASLVESVMLGV 363
                   +  +  SRLG   +D+   Q++Q G+P S   ++G  + S+ S+ + +   +
Sbjct: 370 PLASAWMLMGGVAASRLGLWMFDLAVMQLMQDGVPESDRCVVGGVQNSLQSMFDLLTYVM 429

Query: 364 AIIANDVSHFGFLATLSLLSVVGAAWMFCHWLLNPTDEQRSLFSFD 409
            II +D   FG L  LS   V  AA M+    ++    ++ LF  D
Sbjct: 430 GIIVSDPRDFGELIVLSFFLVTCAAAMYT---MHVYRVRKHLFHLD 472

May be involved in iron transport and iron homeostasis.

Oryza sativa subsp. japonica (taxid: 39947)

>sp|F4KGN5|S40A2_ARATH Solute carrier family 40 member 2 OS=Arabidopsis thaliana GN=IREG2 PE=2 SV=1

 Score = 83.6 bits (205), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 94/404 (23%), Positives = 177/404 (43%), Gaps = 41/404 (10%)

Query: 13  GPLVGKLMDHSPRIPAYICLNTVQAAAQLLSAAMIIHAHTVIPTSSSMLLHPWFFVLV-- 70
           GP+VG+++D    +         Q  + +++   ++ A  V+P   S    P F  LV  
Sbjct: 85  GPIVGQMIDGMSYVKVLRLWLVTQNLSFIVAGGAVV-ALLVVPDLKSQNF-PVFATLVVL 142

Query: 71  --LAGAVERLTGVALGVAVERDWAVLLAGINRPIALAKANAVLNRIDLLCEIAGASLFGI 128
             L+GA+  L+ +A  V +ERDW V+++  + P  L + N+V+  IDL  ++    + G+
Sbjct: 143 TNLSGAIGVLSTLAGTVLIERDWVVVMSEGHSPAVLTRMNSVIRGIDLSSKLLSPVITGL 202

Query: 129 LLSKYE-PVTCLKFAAGLIMWSLPVMIILTWFTNKISSGVLDRAKCSQSCCRTSNEGPVP 187
           ++S      + + FAA    W+   + I  W    + +GV    +  +     S++    
Sbjct: 203 IISFVSLRASAITFAA----WATITVWIEYWLFISVYNGVPAIVQSDERRSLRSSQSQAE 258

Query: 188 DADN---------------------------IVDVGIEAIKLGWKEYMQQPVLPASLAYV 220
           + D+                           +  +   +    W+ Y+ Q ++   ++  
Sbjct: 259 ETDSASSFYVPLLHEEESYRNTQSRSRILRILERISESSFVSAWRNYLNQEIVLPGVSLA 318

Query: 221 LLCLNVVLTPGSLMTAFLTQRGLNPSIIGGFSGLCASMGVAATFLSAYLVRRLGILKAGA 280
           LL   V L+ G+LMTA L  +G+   IIG   G+ A +G+AAT L   +  R+  L+ G 
Sbjct: 319 LLFFTV-LSFGTLMTATLEWKGIPTYIIGIGRGISAGVGLAATVLYPLMQSRISPLRTGV 377

Query: 281 AGLIFQASLLAMAVAVYWSGSLSQQNPLLFFLCLIVLSRLGHMSYDIVGAQILQTGIPSS 340
                Q + L + V   W       + +L  +  +  SRLG   +D+   Q +Q  +P S
Sbjct: 378 WSFWSQWTCLLVCVGSIWVEKEKIASYML--MAGVAASRLGLWMFDLAVIQQMQDLVPES 435

Query: 341 KANLIGTTEISVASLVESVMLGVAIIANDVSHFGFLATLSLLSV 384
              ++G  + S+ S ++ +   + II ++   F  L  +S  +V
Sbjct: 436 DRCVVGGVQNSLQSALDLMANLLGIIVSNPKDFWMLTLISFATV 479

Vacuolar transporter that is involved in the transport of excess nickel into the vacuole under iron deficiency, increasing cellular tolerance to nickel under iron deficiency stress response.

Arabidopsis thaliana (taxid: 3702)

>sp|O80905|S40A1_ARATH Solute carrier family 40 member 1 OS=Arabidopsis thaliana GN=IREG1 PE=3 SV=1

 Score = 82.8 bits (203), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 100/406 (24%), Positives = 175/406 (43%), Gaps = 45/406 (11%)

Query: 13  GPLVGKLMDHSPRIPAYICLNTVQAAAQLLSAAMIIHAHTVIPTSSSMLLHPWFFVLV-- 70
           GP+VG+ ++    +         Q  +  ++   +I    V    S  L  P F +L+  
Sbjct: 89  GPIVGQWVEGMDYVKVLRLWLLFQNLSYTIAGGAVIKLLLVSDLKSRNL--PVFAILIVL 146

Query: 71  --LAGAVERLTGVALGVAVERDWAVLLAGINRPIALAKANAVLNRIDLLCEIAGASLFGI 128
             LAGA+  L+ +A  + +ERDWAV+++  + P  L K N+V+  IDL  ++    + G+
Sbjct: 147 TNLAGAIGVLSTLAGTILIERDWAVVMSEGHPPAVLTKMNSVIRGIDLSSKLLSPVITGL 206

Query: 129 LLSKYE-PVTCLKFAAGLIMWSLPVMIILTWFTNKISSGVLDRAKCSQSCCRTSNEGPVP 187
           ++S      + + FAA    W+     +  W    + SGV    + ++     S    V 
Sbjct: 207 IISFVSLKASAITFAA----WATITAWVEYWLFISVYSGVPAITRSNERRILRSRTKQVE 262

Query: 188 DADNIVDV----GIEAIKLG-----------------------WKEYMQQPVLPASLAYV 220
             D  V V    G E    G                       W+ Y  Q V+   ++  
Sbjct: 263 GRDAPVSVSIVPGTEEGYTGNPPSRTGILVILDRMSKSSFVGAWRIYFNQEVVLPGVSLA 322

Query: 221 LLCLNVVLTPGSLMTAFLTQRGLNPSIIGGFSGLCASMGVAATFLSAYLVRRLGILKAGA 280
           LL   V L+ G+LMTA L   G+   IIG   G+ A++G+AAT +   +  RL  L+ G 
Sbjct: 323 LLFFTV-LSFGTLMTATLQWEGIPTYIIGIGRGISATVGLAATLVYPLMQSRLSTLRTGL 381

Query: 281 AGLIFQASLLAMAVAVYWSGSLSQQNPLLFFLCL--IVLSRLGHMSYDIVGAQILQTGIP 338
                Q S L + V   W     +++ +  ++ +  +  SRLG   +D+   Q +Q  + 
Sbjct: 382 WSFWSQWSCLLVCVGSIW----VKKDKIASYMLMAGVAASRLGLWMFDLAVIQQMQDLVS 437

Query: 339 SSKANLIGTTEISVASLVESVMLGVAIIANDVSHFGFLATLSLLSV 384
            S   ++G  + S+ S ++ +   + II ++   F  L  +S  +V
Sbjct: 438 ESDRCVVGGVQNSLQSALDLMAYLLGIIVSNPKDFWILTLISFSTV 483

May be involved in iron transport and iron homeostasis.

Arabidopsis thaliana (taxid: 3702)

>sp|Q9I9R3|S40A1_DANRE Solute carrier family 40 member 1 OS=Danio rerio GN=slc40a1 PE=2 SV=2

 Score = 73.9 bits (180), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 95/449 (21%), Positives = 176/449 (39%), Gaps = 82/449 (18%)

Query: 13  GPLVGKLMDHSPRIPAYICLNTVQAAAQLLSAAMIIHAHTVIPTSSSM----LLHPWFFV 68
           G ++G  +D +PR+        VQ +A +L  A+++         SSM    LL   + +
Sbjct: 73  GAIIGDWVDKNPRLKVAQTSLVVQNSAVILCGALLMAVFQFKQQLSSMYDGWLLTTCYIM 132

Query: 69  LVLAGAVERLTGVALGVAVERDWAVLLAGINRPIALAKANAVLNRIDLLCEIAGASLFGI 128
           ++    +  L   A+ + ++RDW V++AG +R   LA  NA +  ID L  I    L G 
Sbjct: 133 VISIANIANLASTAMSITIQRDWVVVVAGDDRS-KLADMNATVRIIDQLTNILAPMLVGQ 191

Query: 129 LLSKYEPVTCLKFAAGLIMWSLPVMIILTWFTNKISSGVLDRAKCSQSCCRT-------- 180
           +++         F +G  ++S+ +   L W   + +  +  +A    S  +         
Sbjct: 192 IMAFGSHFIGCGFISGWNLFSMCLEYFLLWKVYQKTPALAFKAGQKDSDDQELKHLNIQK 251

Query: 181 ---SNEGPV-------PDADNIVDVG--------IEAIKLGWKEYMQQPVLPASLAYVLL 222
              + E PV         ++   D G        I   K GW  Y  Q +  A ++   L
Sbjct: 252 EIGNTESPVEASQLMTESSEPKKDTGCCYQMAEPIRTFKDGWVAYYNQSIFFAGMSLAFL 311

Query: 223 CLNVVLTPGSLMTAFLTQRGLNPSIIGGFSGLCASMGVAATFLSAYLVRRLGILKAGAAG 282
            +  VL    + T +   +GLN S++    G  A  G+  T    ++ ++ G+++ G   
Sbjct: 312 YMT-VLGFDCITTGYAYTQGLNGSVLSLLMGASAVSGICGTVAFTWIRKKCGLIRTGFIA 370

Query: 283 LIFQASLLAMAVAVYW-----------------------SGSLS-------------QQN 306
            + Q S L + VA  +                       SGSL              Q N
Sbjct: 371 GVTQLSCLTLCVASVFAPGSPFDLSVSPFEEVLRHLFGDSGSLRESPTFIPTTEPPIQAN 430

Query: 307 PLLF--------------FLCLIVLSRLGHMSYDIVGAQILQTGIPSSKANLIGTTEISV 352
             +F                  ++ +R+G  S+D+   Q++Q  +  S+  +I   + S+
Sbjct: 431 VTVFEEAPPVESYMSVGLLFAGVIAARVGLWSFDLTVTQLIQENVIESERGVINGVQNSM 490

Query: 353 ASLVESVMLGVAIIANDVSHFGFLATLSL 381
             L++ +   + I+A +   FG L  +S+
Sbjct: 491 NYLLDLLHFIMVILAPNPEAFGLLVIISV 519

May be involved in iron export and also in transfer of iron between maternal and fetal circulation.

Danio rerio (taxid: 7955)

>sp|Q9NP59|S40A1_HUMAN Solute carrier family 40 member 1 OS=Homo sapiens GN=SLC40A1 PE=1 SV=1

 Score = 72.8 bits (177), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 73/327 (22%), Positives = 136/327 (41%), Gaps = 36/327 (11%)

Query: 9   LIVGGPLVGKLMDHSPRIPAYICLNTVQAAAQLLSAAMI----IHAHTVIPTSSSMLLHP 64
           ++V G ++G  +D + R+        VQ  + +L   ++    +H H ++      +L  
Sbjct: 72  VLVLGAIIGDWVDKNARLKVAQTSLVVQNVSVILCGIILMMVFLHKHELLTMYHGWVLTS 131

Query: 65  WFFVLVLAGAVERLTGVALGVAVERDWAVLLAGINRPIALAKANAVLNRIDLLCEIAGAS 124
            + +++    +  L   A  + ++RDW V++AG +R   LA  NA + RID L  I    
Sbjct: 132 CYILIITIANIANLASTATAITIQRDWIVVVAGEDRS-KLANMNATIRRIDQLTNILAPM 190

Query: 125 LFGILLSKYEPVTCLKFAAGLIMWSLPVMIILTWFTNK------ISSGVLDRAKCSQSCC 178
             G +++   PV    F +G  + S+ V  +L W   +      + +G+ +     +   
Sbjct: 191 AVGQIMTFGSPVIGCGFISGWNLVSMCVEYVLLWKVYQKTPALAVKAGLKEEETELKQLN 250

Query: 179 RTSNEGPVP---------DADNIVDVGIE--------------AIKLGWKEYMQQPVLPA 215
              +  P P            NI ++  E                + GW  Y  QPV  A
Sbjct: 251 LHKDTEPKPLEGTHLMGVKDSNIHELEHEQEPTCASQMAEPFRTFRDGWVSYYNQPVFLA 310

Query: 216 SLAYVLLCLNVVLTPGSLMTAFLTQRGLNPSIIGGFSGLCASMGVAATFLSAYLVRRLGI 275
            +    L +  VL    + T +   +GL+ SI+    G  A  G+  T    +L R+ G+
Sbjct: 311 GMGLAFLYM-TVLGFDCITTGYAYTQGLSGSILSILMGASAITGIMGTVAFTWLRRKCGL 369

Query: 276 LKAG-AAGLIFQASLLAMAVAVYWSGS 301
           ++ G  +GL   + L+   ++V+  GS
Sbjct: 370 VRTGLISGLAQLSCLILCVISVFMPGS 396

May be involved in iron export from duodenal epithelial cell and also in transfer of iron between maternal and fetal circulation. Mediates iron efflux in the presence of a ferroxidase (hephaestin and/or ceruloplasmin).

Homo sapiens (taxid: 9606)

>sp|Q923U9|S40A1_RAT Solute carrier family 40 member 1 OS=Rattus norvegicus GN=Slc40a1 PE=2 SV=2

 Score = 70.5 bits (171), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 75/327 (22%), Positives = 137/327 (41%), Gaps = 36/327 (11%)

Query: 9   LIVGGPLVGKLMDHSPRIPAYICLNTVQAAAQLLSAAMI----IHAHTVIPTSSSMLLHP 64
           ++V G ++G  +D + R+        VQ  + +L   ++    +H + ++      +L  
Sbjct: 72  VLVLGAIIGDWVDKNARLKVAQTSLVVQNVSVILCGIILMMVFLHKNELLNMYHGWVLTV 131

Query: 65  WFFVLVLAGAVERLTGVALGVAVERDWAVLLAGINRPIALAKANAVLNRIDLLCEIAGAS 124
            + +++    +  L   A  + ++RDW V++AG NR   LA  NA + RID L  I    
Sbjct: 132 CYILIITIANIANLASTATAITIQRDWIVVVAGENRS-RLADMNATIRRIDQLTNILAPM 190

Query: 125 LFGILLSKYEPVTCLKFAAGLIMWSLPVMIILTWFTNKISSGVLDRA--KCSQSCCRT-- 180
             G +++   PV    F +G  + S+ V   L W   + +  +  +A  K  +S  +   
Sbjct: 191 AVGQIMTFGSPVIGCGFISGWNLVSMCVEYFLLWKVYQKTPALAVKAALKVEESELKQLT 250

Query: 181 --SNEGPVP---------DADNIVDVGIE--------------AIKLGWKEYMQQPVLPA 215
              +  P P            NI ++  E                + GW  Y  QPV  A
Sbjct: 251 SPKDTEPKPLEGTHLMGEKDSNIRELECEQEPTCASQIAEPFRTFRDGWVSYYNQPVFLA 310

Query: 216 SLAYVLLCLNVVLTPGSLMTAFLTQRGLNPSIIGGFSGLCASMGVAATFLSAYLVRRLGI 275
            +    L +  VL    + T +   +GL+ SI+    G  A  G+  T    +L R+ G+
Sbjct: 311 GMGLAFLYMT-VLGFDCITTGYAYTQGLSGSILSVLMGASAITGIMGTVAFTWLRRKCGL 369

Query: 276 LKAGA-AGLIFQASLLAMAVAVYWSGS 301
           ++ G  +GL   + L+   ++V+  GS
Sbjct: 370 VRTGLFSGLAQLSCLILCVISVFMPGS 396

May be involved in iron export from duodenal epithelial cell and also in transfer of iron between maternal and fetal circulation. Mediates iron efflux in the presence of a ferroxidase (hephaestin and/or ceruloplasmin).

Rattus norvegicus (taxid: 10116)

>sp|Q9JHI9|S40A1_MOUSE Solute carrier family 40 member 1 OS=Mus musculus GN=Slc40a1 PE=1 SV=1

 Score = 70.1 bits (170), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 75/327 (22%), Positives = 137/327 (41%), Gaps = 36/327 (11%)

Query: 9   LIVGGPLVGKLMDHSPRIPAYICLNTVQAAAQLLSAAMI----IHAHTVIPTSSSMLLHP 64
           ++V G ++G  +D + R+        VQ  + +L   ++    +H + ++      +L  
Sbjct: 72  VLVLGAIIGDWVDKNARLKVAQTSLVVQNVSVILCGIILMMVFLHKNELLTMYHGWVLTV 131

Query: 65  WFFVLVLAGAVERLTGVALGVAVERDWAVLLAGINRPIALAKANAVLNRIDLLCEIAGAS 124
            + +++    +  L   A  + ++RDW V++AG NR   LA  NA + RID L  I    
Sbjct: 132 CYILIITIANIANLASTATAITIQRDWIVVVAGENRS-RLADMNATIRRIDQLTNILAPM 190

Query: 125 LFGILLSKYEPVTCLKFAAGLIMWSLPVMIILTWFTNKISSGVLDRA--KCSQSCCRT-- 180
             G +++   PV    F +G  + S+ V   L W   + +  +  +A  K  +S  +   
Sbjct: 191 AVGQIMTFGSPVIGCGFISGWNLVSMCVEYFLLWKVYQKTPALAVKAALKVEESELKQLT 250

Query: 181 --SNEGPVP---------DADNIVDVGIE--------------AIKLGWKEYMQQPVLPA 215
              +  P P            NI ++  E                + GW  Y  QPV  A
Sbjct: 251 SPKDTEPKPLEGTHLMGEKDSNIRELECEQEPTCASQMAEPFRTFRDGWVSYYNQPVFLA 310

Query: 216 SLAYVLLCLNVVLTPGSLMTAFLTQRGLNPSIIGGFSGLCASMGVAATFLSAYLVRRLGI 275
            +    L +  VL    + T +   +GL+ SI+    G  A  G+  T    +L R+ G+
Sbjct: 311 GMGLAFLYMT-VLGFDCITTGYAYTQGLSGSILSILMGASAITGIMGTVAFTWLRRKCGL 369

Query: 276 LKAGA-AGLIFQASLLAMAVAVYWSGS 301
           ++ G  +GL   + L+   ++V+  GS
Sbjct: 370 VRTGLFSGLAQLSCLILCVISVFMPGS 396

May be involved in iron export from duodenal epithelial cell and also in transfer of iron between maternal and fetal circulation. Mediates iron efflux in the presence of a ferroxidase (hephaestin and/or ceruloplasmin).

Mus musculus (taxid: 10090)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	412
255542912	596	conserved hypothetical protein [Ricinus	0.992	0.686	0.8	0.0
224124478	650	ferroportin protein family [Populus tric	1.0	0.633	0.743	0.0
449454002	604	PREDICTED: solute carrier family 40 memb	0.985	0.672	0.762	1e-179
449530126	475	PREDICTED: solute carrier family 40 memb	0.985	0.854	0.762	1e-178
225450573	564	PREDICTED: solute carrier family 40 memb	0.956	0.698	0.767	1e-172
22327094	598	iron-regulated protein 3 [Arabidopsis th	0.995	0.685	0.750	1e-172
297808711	594	hypothetical protein ARALYDRAFT_489514 [	0.995	0.690	0.748	1e-172
356535006	587	PREDICTED: solute carrier family 40 memb	0.997	0.700	0.766	1e-170
218187076	614	hypothetical protein OsI_38730 [Oryza sa	0.985	0.661	0.626	1e-144
115489078	591	Os12g0562100 [Oryza sativa Japonica Grou	0.985	0.686	0.626	1e-144

>gi|255542912|ref|XP_002512519.1| conserved hypothetical protein [Ricinus communis] gi|223548480|gb|EEF49971.1| conserved hypothetical protein [Ricinus communis]

 Score =  657 bits (1694), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 328/410 (80%), Positives = 366/410 (89%), Gaps = 1/410 (0%)

Query: 1   MGFFSKLILIVGGPLVGKLMDHSPRIPAYICLNTVQAAAQLLSAAMIIHAHTVIPTS-SS 59
           MGFF+KL +I GGPLVGKLMD+SPRIP+ I LN VQ AAQLLSA+MIIHAHTV PTS SS
Sbjct: 184 MGFFTKLAIIAGGPLVGKLMDYSPRIPSSIGLNIVQVAAQLLSASMIIHAHTVSPTSASS 243

Query: 60  MLLHPWFFVLVLAGAVERLTGVALGVAVERDWAVLLAGINRPIALAKANAVLNRIDLLCE 119
           +LLHPWF VLV+AGA+ERL GVALGVA+ERDW VLLAGINRPIALA+ANAVLNRIDLLCE
Sbjct: 244 ILLHPWFLVLVVAGAIERLCGVALGVAMERDWVVLLAGINRPIALAQANAVLNRIDLLCE 303

Query: 120 IAGASLFGILLSKYEPVTCLKFAAGLIMWSLPVMIILTWFTNKISSGVLDRAKCSQSCCR 179
           IAGASLFGILL KY+PV+CLK AAGL++WSLP+MI LT  TNK+S+GVLD  + S +CCR
Sbjct: 304 IAGASLFGILLCKYDPVSCLKIAAGLMIWSLPIMIGLTLLTNKLSTGVLDHTRSSHACCR 363

Query: 180 TSNEGPVPDADNIVDVGIEAIKLGWKEYMQQPVLPASLAYVLLCLNVVLTPGSLMTAFLT 239
            S  G +   D+IVD G+E IKLGWKEY+QQPVLPASLAYVLL  NVVL P SLMTAFLT
Sbjct: 364 ESTGGAMAGVDSIVDRGLETIKLGWKEYLQQPVLPASLAYVLLYFNVVLAPSSLMTAFLT 423

Query: 240 QRGLNPSIIGGFSGLCASMGVAATFLSAYLVRRLGILKAGAAGLIFQASLLAMAVAVYWS 299
           QRG+NPSI+ GFSGLCA+MGV ATFLSA LVR+LGILKAGAAGL+FQASLL +AVAVYWS
Sbjct: 424 QRGVNPSIVAGFSGLCAAMGVLATFLSASLVRQLGILKAGAAGLVFQASLLTLAVAVYWS 483

Query: 300 GSLSQQNPLLFFLCLIVLSRLGHMSYDIVGAQILQTGIPSSKANLIGTTEISVASLVESV 359
           GSLSQQ+PLLFFL LIV+SRLGHMSYD++GAQILQTGIPSSKANLIG TE+S+ASL ESV
Sbjct: 484 GSLSQQSPLLFFLGLIVVSRLGHMSYDVIGAQILQTGIPSSKANLIGATEVSIASLAESV 543

Query: 360 MLGVAIIANDVSHFGFLATLSLLSVVGAAWMFCHWLLNPTDEQRSLFSFD 409
           MLGVAIIANDVSHFGFLA LSLLSVVGAAWMF  WL NPTDEQRSLF+++
Sbjct: 544 MLGVAIIANDVSHFGFLAILSLLSVVGAAWMFWRWLSNPTDEQRSLFAYE 593

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224124478|ref|XP_002330033.1| ferroportin protein family [Populus trichocarpa] gi|222871458|gb|EEF08589.1| ferroportin protein family [Populus trichocarpa]

 Score =  649 bits (1674), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 333/448 (74%), Positives = 370/448 (82%), Gaps = 36/448 (8%)

Query: 1   MGFFSKLILIVGGPLVGKLMDHSPRIPAYICLNTVQAAAQLLSAAMIIHAHTVIPTS-SS 59
           M FFSKL +IVGGPLVGKLMD+SPR+PAY+ LN VQAAAQLLSA MIIHAHTV PTS SS
Sbjct: 203 MCFFSKLAIIVGGPLVGKLMDYSPRVPAYMGLNVVQAAAQLLSATMIIHAHTVSPTSVSS 262

Query: 60  MLLHPWFFVLVLAGAVERLTGVALGVAVERDWAVL------------------------- 94
           +LL PWF VLVLAGA+ERL GVA GVAVERDW +L                         
Sbjct: 263 VLLRPWFIVLVLAGAIERLCGVATGVAVERDWVILVLSFCAVIIARFFNGYCFNLLETLA 322

Query: 95  ----------LAGINRPIALAKANAVLNRIDLLCEIAGASLFGILLSKYEPVTCLKFAAG 144
                     LAG+NRPIALA+ANAVLNRIDL+CEIAGAS+FGILLSKYEPVTCLKFAA 
Sbjct: 323 ISNAVSLCVQLAGMNRPIALAQANAVLNRIDLICEIAGASVFGILLSKYEPVTCLKFAAA 382

Query: 145 LIMWSLPVMIILTWFTNKISSGVLDRAKCSQSCCRTSNEGPVPDADNIVDVGIEAIKLGW 204
            ++WSLPVMI LTW TNK+++GVLDR +  Q+CC  S+E    DA +IVD G+E IKLGW
Sbjct: 383 SMIWSLPVMIGLTWLTNKLATGVLDRPRSCQTCCGESSEEAAVDAGSIVDRGLETIKLGW 442

Query: 205 KEYMQQPVLPASLAYVLLCLNVVLTPGSLMTAFLTQRGLNPSIIGGFSGLCASMGVAATF 264
           KEYMQQPVLPASLAYVLL  NVVL P SLMTAFLTQRG+NPS+IGGFSGLCA MGVAATF
Sbjct: 443 KEYMQQPVLPASLAYVLLFFNVVLAPSSLMTAFLTQRGVNPSVIGGFSGLCAFMGVAATF 502

Query: 265 LSAYLVRRLGILKAGAAGLIFQASLLAMAVAVYWSGSLSQQNPLLFFLCLIVLSRLGHMS 324
           LSA LV++LGILKAGAAGL+FQASLL++AVAVYWSGSLSQQ+P+LFFL LIVLSRLGHMS
Sbjct: 503 LSATLVKQLGILKAGAAGLVFQASLLSLAVAVYWSGSLSQQSPVLFFLGLIVLSRLGHMS 562

Query: 325 YDIVGAQILQTGIPSSKANLIGTTEISVASLVESVMLGVAIIANDVSHFGFLATLSLLSV 384
           YD+VGAQILQTGIP+SKANLIGTTE+SVASL ESVMLGVAIIAND SHFGFLA LSLLSV
Sbjct: 563 YDVVGAQILQTGIPTSKANLIGTTEVSVASLAESVMLGVAIIANDASHFGFLAMLSLLSV 622

Query: 385 VGAAWMFCHWLLNPTDEQRSLFSFDPQS 412
           VGAAWMFC  L+NPTDEQRSLF+ +  +
Sbjct: 623 VGAAWMFCRLLVNPTDEQRSLFAVESNT 650

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449454002|ref|XP_004144745.1| PREDICTED: solute carrier family 40 member 3, chloroplastic-like [Cucumis sativus]

 Score =  632 bits (1631), Expect = e-179,   Method: Compositional matrix adjust.
 Identities = 315/413 (76%), Positives = 357/413 (86%), Gaps = 7/413 (1%)

Query: 1   MGFFSKLILIVGGPLVGKLMDHSPRIPAYICLNTVQAAAQLLSAAMIIHAHTVIPT--SS 58
           MGFF+KL LIVGGPLVGK MD+ PR+PAY CLN VQAAAQLLSA+M+I+AHTV  T  SS
Sbjct: 193 MGFFTKLALIVGGPLVGKFMDNFPRVPAYTCLNCVQAAAQLLSASMVIYAHTVPHTAASS 252

Query: 59  SMLLHPWFFVLVLAGAVERLTGVALGVAVERDWAVLLAGINRPIALAKANAVLNRIDLLC 118
           S+LL PWF  L+ AGA+ERL+G+ALGVA+ERDW VLLAGINRPIALA+ANAVL+RIDLLC
Sbjct: 253 SILLQPWFVTLIFAGAIERLSGIALGVAMERDWVVLLAGINRPIALAEANAVLSRIDLLC 312

Query: 119 EIAGASLFGILLSKYEPVTCLKFAAGLIMWSLPVMIILTWFTNKISSGVLDRAKCSQSCC 178
           EI GASLFGI+LSKY+PVTCLK AAGL++WSLPV+++LTW TN++S+GVLDRAKC Q+CC
Sbjct: 313 EIVGASLFGIILSKYDPVTCLKCAAGLMLWSLPVVVLLTWLTNQLSTGVLDRAKCLQTCC 372

Query: 179 RTSNEGPVPDADNIVDVGIEAIKLGWKEYMQQPVLPASLAYVLLCLNVVLTPGSLMTAFL 238
               E   P     V+VG+E IK GWKEY+QQP LPASLAYVLL  N VL PGSLMTAFL
Sbjct: 373 GDPTEVTSP-----VNVGVEVIKNGWKEYLQQPALPASLAYVLLYFNAVLAPGSLMTAFL 427

Query: 239 TQRGLNPSIIGGFSGLCASMGVAATFLSAYLVRRLGILKAGAAGLIFQASLLAMAVAVYW 298
           TQ+GL+PSIIGGFSGLCA MGV ATF+SA LVR+ GILKAGA GLIFQA+LL +AVAVY 
Sbjct: 428 TQQGLSPSIIGGFSGLCAFMGVTATFVSANLVRQFGILKAGAVGLIFQAALLTVAVAVYL 487

Query: 299 SGSLSQQNPLLFFLCLIVLSRLGHMSYDIVGAQILQTGIPSSKANLIGTTEISVASLVES 358
           SGSLS+Q+PLLFFL +IVLSRLGHMSY++VG QILQTGIPSSK NLI TTE+SVASL ES
Sbjct: 488 SGSLSRQSPLLFFLVMIVLSRLGHMSYNVVGQQILQTGIPSSKTNLIATTEVSVASLAES 547

Query: 359 VMLGVAIIANDVSHFGFLATLSLLSVVGAAWMFCHWLLNPTDEQRSLFSFDPQ 411
           +MLGVAIIAND SHFGFLA LSLLSVVGAA +FC WLLNPTDEQR LFSF  Q
Sbjct: 548 IMLGVAIIANDTSHFGFLAMLSLLSVVGAAVIFCQWLLNPTDEQRKLFSFSSQ 600

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449530126|ref|XP_004172047.1| PREDICTED: solute carrier family 40 member 3, chloroplastic-like [Cucumis sativus]

 Score =  630 bits (1624), Expect = e-178,   Method: Compositional matrix adjust.
 Identities = 315/413 (76%), Positives = 357/413 (86%), Gaps = 7/413 (1%)

Query: 1   MGFFSKLILIVGGPLVGKLMDHSPRIPAYICLNTVQAAAQLLSAAMIIHAHTVIPT--SS 58
           MGFF+KL LIVGGPLVGK MD+ PR+PAY CLN VQAAAQLLSA+M+I+AHTV  T  SS
Sbjct: 64  MGFFTKLALIVGGPLVGKFMDNFPRVPAYTCLNCVQAAAQLLSASMVIYAHTVPHTAASS 123

Query: 59  SMLLHPWFFVLVLAGAVERLTGVALGVAVERDWAVLLAGINRPIALAKANAVLNRIDLLC 118
           S+LL PWF  L+ AGA+ERL+G+ALGVA+ERDW VLLAGINRPIALA+ANAVL+RIDLLC
Sbjct: 124 SILLQPWFVTLIFAGAIERLSGIALGVAMERDWVVLLAGINRPIALAEANAVLSRIDLLC 183

Query: 119 EIAGASLFGILLSKYEPVTCLKFAAGLIMWSLPVMIILTWFTNKISSGVLDRAKCSQSCC 178
           EI GASLFGI+LSKY+PVTCLK AAGL++WSLPV+++LTW TN++S+GVLDRAKC Q+CC
Sbjct: 184 EIVGASLFGIILSKYDPVTCLKCAAGLMLWSLPVVVLLTWLTNQLSTGVLDRAKCLQTCC 243

Query: 179 RTSNEGPVPDADNIVDVGIEAIKLGWKEYMQQPVLPASLAYVLLCLNVVLTPGSLMTAFL 238
               E   P     V+VG+E IK GWKEY+QQP LPASLAYVLL  N VL PGSLMTAFL
Sbjct: 244 GDPTEVTSP-----VNVGVEVIKNGWKEYLQQPALPASLAYVLLYFNAVLAPGSLMTAFL 298

Query: 239 TQRGLNPSIIGGFSGLCASMGVAATFLSAYLVRRLGILKAGAAGLIFQASLLAMAVAVYW 298
           TQ+GL+PSIIGGFSGLCA MGV ATF+SA LVR+ GILKAGA GLIFQA+LL +AVAVY 
Sbjct: 299 TQQGLSPSIIGGFSGLCAFMGVTATFVSANLVRQFGILKAGAVGLIFQAALLTVAVAVYL 358

Query: 299 SGSLSQQNPLLFFLCLIVLSRLGHMSYDIVGAQILQTGIPSSKANLIGTTEISVASLVES 358
           SGSLS+Q+PLLFFL +IVLSRLGHMSY++VG QILQTGIPSSK NLI TTE+SVASL ES
Sbjct: 359 SGSLSRQSPLLFFLVMIVLSRLGHMSYNVVGQQILQTGIPSSKTNLIATTEVSVASLAES 418

Query: 359 VMLGVAIIANDVSHFGFLATLSLLSVVGAAWMFCHWLLNPTDEQRSLFSFDPQ 411
           +MLGVAIIAND SHFGFLA LSLLSVVGAA +FC WLLNPTDEQR LFSF  Q
Sbjct: 419 IMLGVAIIANDTSHFGFLAMLSLLSVVGAAVIFCQWLLNPTDEQRKLFSFSSQ 471

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225450573|ref|XP_002281965.1| PREDICTED: solute carrier family 40 member 1 [Vitis vinifera] gi|296089784|emb|CBI39603.3| unnamed protein product [Vitis vinifera]

 Score =  612 bits (1578), Expect = e-172,   Method: Compositional matrix adjust.
 Identities = 314/409 (76%), Positives = 349/409 (85%), Gaps = 15/409 (3%)

Query: 1   MGFFSKLILIVGGPLVGKLMDHSPRIPAYICLNTVQAAAQLLSAAMIIHAHTVIPT-SSS 59
           +GFF+KL ++VGGPLVG+LMD+ PR+PAY CLN VQA A LLS AMII AHTV  T +SS
Sbjct: 170 IGFFTKLAVVVGGPLVGQLMDYFPRVPAYNCLNLVQATAHLLSVAMIIRAHTVPSTLASS 229

Query: 60  MLLHPWFFVLVLAGAVERLTGVALGVAVERDWAVLLAGINRPIALAKANAVLNRIDLLCE 119
           +LL PWFFVLVLAG+VERL+G+ALGV VERDW VLLAG NRPIALA+ANAVLNRIDL+CE
Sbjct: 230 VLLRPWFFVLVLAGSVERLSGLALGVTVERDWIVLLAGPNRPIALAEANAVLNRIDLVCE 289

Query: 120 IAGASLFGILLSKYEPVTCLKFAAGLIMWSLPVMIILTWFTNKISSGVLDRAKCSQSCCR 179
           IAGASLFGILLSKY+ +T LKF AGL+ W++PV+++LTW TNK+SSGVL+R K       
Sbjct: 290 IAGASLFGILLSKYDIMTYLKFTAGLMTWTVPVVLVLTWLTNKLSSGVLNRTKSH----- 344

Query: 180 TSNEGPVPDADNIVDVGIEAIKLGWKEYMQQPVLPASLAYVLLCLNVVLTPGSLMTAFLT 239
                   DA+  V +G+ AIK GW EY+QQPVLPASLAYVLL  NV L PG LMTAFLT
Sbjct: 345 --------DAEVTVKIGVGAIKHGWMEYLQQPVLPASLAYVLLYFNV-LMPGGLMTAFLT 395

Query: 240 QRGLNPSIIGGFSGLCASMGVAATFLSAYLVRRLGILKAGAAGLIFQASLLAMAVAVYWS 299
           QRGLNPSI+GGFSGLCA MGVAATF+SA LVRRLG+LKAGAAGLIFQA LL +AVAVYWS
Sbjct: 396 QRGLNPSIVGGFSGLCAFMGVAATFISANLVRRLGMLKAGAAGLIFQAFLLTIAVAVYWS 455

Query: 300 GSLSQQNPLLFFLCLIVLSRLGHMSYDIVGAQILQTGIPSSKANLIGTTEISVASLVESV 359
           GSLSQQ PLLFFLCLIVLSRLGHMSYD+VG QILQTGIPSSKANLIGTTE SVASL E V
Sbjct: 456 GSLSQQTPLLFFLCLIVLSRLGHMSYDVVGTQILQTGIPSSKANLIGTTEASVASLAEFV 515

Query: 360 MLGVAIIANDVSHFGFLATLSLLSVVGAAWMFCHWLLNPTDEQRSLFSF 408
           MLGVAIIANDVSHFGFLA LSL S VGAAWMFC WL+NPT+EQRSLFSF
Sbjct: 516 MLGVAIIANDVSHFGFLAMLSLFSAVGAAWMFCRWLVNPTEEQRSLFSF 564

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|22327094|ref|NP_198034.2| iron-regulated protein 3 [Arabidopsis thaliana] gi|75162463|sp|Q8W4E7.1|S40A3_ARATH RecName: Full=Solute carrier family 40 member 3, chloroplastic; AltName: Full=Ferroportin-3; AltName: Full=Iron-regulated transporter 3; Short=AtIREG3; AltName: Full=Protein MULTIPLE ANTIBIOTIC RESISTANCE 1; Flags: Precursor gi|17065060|gb|AAL32684.1| unknown protein [Arabidopsis thaliana] gi|22136218|gb|AAM91187.1| unknown protein [Arabidopsis thaliana] gi|332006226|gb|AED93609.1| iron-regulated protein 3 [Arabidopsis thaliana]

 Score =  610 bits (1574), Expect = e-172,   Method: Compositional matrix adjust.
 Identities = 310/413 (75%), Positives = 348/413 (84%), Gaps = 3/413 (0%)

Query: 1   MGFFSKLILIVGGPLVGKLMDHSPRIPAYICLNTVQAAAQLLSAAMIIHAHTVIPTS-SS 59
           MGF +KL +I GGP+VGK MD+SPR+P YI LN +QAAAQ+LSA MIIHA+TV  TS SS
Sbjct: 187 MGFVTKLAIIAGGPVVGKFMDYSPRVPTYISLNVIQAAAQVLSAGMIIHAYTVPSTSASS 246

Query: 60  MLLHPWFFVLVLAGAVERLTGVALGVAVERDWAVLLAGINRPIALAKANAVLNRIDLLCE 119
           +LL PWFF L+ AGA++ L G+A GVA+ERDW VLLAGINRPIALA+ANAVL+RIDLLCE
Sbjct: 247 ILLQPWFFALLFAGAIDSLCGIASGVAIERDWVVLLAGINRPIALAQANAVLHRIDLLCE 306

Query: 120 IAGASLFGILLSKYEPVTCLKFAAGLIMWSLPVMIILTWFTNKISSGVLDRAKCSQSCCR 179
           IAG  LFGILLSKY+PVTCLKFAA L++ SLP M  L W TNK SSGVLDR KCS + C 
Sbjct: 307 IAGTMLFGILLSKYDPVTCLKFAATLMVGSLPTMTALIWLTNKFSSGVLDRPKCSLNSC- 365

Query: 180 TSNEGPVPDADNIVDVGIEAIKLGWKEYMQQPVLPASLAYVLLCLNVVLTPGSLMTAFLT 239
            S EG   + D+I D+G+E IKLGWKEY+QQPVLPASLAYVLL  N+VLTPGSLMTAFLT
Sbjct: 366 -SAEGSRTNTDSIFDIGMETIKLGWKEYIQQPVLPASLAYVLLYFNIVLTPGSLMTAFLT 424

Query: 240 QRGLNPSIIGGFSGLCASMGVAATFLSAYLVRRLGILKAGAAGLIFQASLLAMAVAVYWS 299
           QR +NPS+IGGFSGLCA MGVAATFLSA LV+R+GILKAGA GL FQASLLA+AVAVY S
Sbjct: 425 QRCVNPSVIGGFSGLCAVMGVAATFLSANLVKRVGILKAGAVGLFFQASLLAVAVAVYCS 484

Query: 300 GSLSQQNPLLFFLCLIVLSRLGHMSYDIVGAQILQTGIPSSKANLIGTTEISVASLVESV 359
            SLS ++PL FFL +IVLSRLGHMSY +VGAQILQTGIPSSKANLIG TEISVASL ES+
Sbjct: 485 SSLSHKSPLFFFLSMIVLSRLGHMSYGVVGAQILQTGIPSSKANLIGATEISVASLAESL 544

Query: 360 MLGVAIIANDVSHFGFLATLSLLSVVGAAWMFCHWLLNPTDEQRSLFSFDPQS 412
           MLGVAI AND SHFGFLA LSLLSVV A+ +FC  L NPTDEQR LFSFDP S
Sbjct: 545 MLGVAIAANDASHFGFLAVLSLLSVVAASLIFCRLLRNPTDEQRRLFSFDPLS 597

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297808711|ref|XP_002872239.1| hypothetical protein ARALYDRAFT_489514 [Arabidopsis lyrata subsp. lyrata] gi|297318076|gb|EFH48498.1| hypothetical protein ARALYDRAFT_489514 [Arabidopsis lyrata subsp. lyrata]

 Score =  610 bits (1574), Expect = e-172,   Method: Compositional matrix adjust.
 Identities = 309/413 (74%), Positives = 349/413 (84%), Gaps = 3/413 (0%)

Query: 1   MGFFSKLILIVGGPLVGKLMDHSPRIPAYICLNTVQAAAQLLSAAMIIHAHTVIPT-SSS 59
           MGF +KL +I GGP+VGK MD+SPR+P YI LN +QAAAQ++SA MIIHA+TV  T +SS
Sbjct: 183 MGFVTKLAIIAGGPVVGKFMDYSPRVPTYISLNVIQAAAQVVSAGMIIHAYTVPSTLASS 242

Query: 60  MLLHPWFFVLVLAGAVERLTGVALGVAVERDWAVLLAGINRPIALAKANAVLNRIDLLCE 119
           +LL PWFF L+ AGA++ L G+A GVA+ERDW VLLAGINRPIALA+ANAVL+R+DLLCE
Sbjct: 243 ILLQPWFFALLFAGAIDSLCGIASGVAIERDWVVLLAGINRPIALAQANAVLHRMDLLCE 302

Query: 120 IAGASLFGILLSKYEPVTCLKFAAGLIMWSLPVMIILTWFTNKISSGVLDRAKCSQSCCR 179
           IAG  LFGILLSKY+PVTCLKFAA L++ SLP M  L W TNK SSGVLDR KCS S C 
Sbjct: 303 IAGTMLFGILLSKYDPVTCLKFAATLMVGSLPTMTALIWLTNKFSSGVLDRPKCSLSSC- 361

Query: 180 TSNEGPVPDADNIVDVGIEAIKLGWKEYMQQPVLPASLAYVLLCLNVVLTPGSLMTAFLT 239
            S EG   + D+I D+G+E IKLGWKEY+QQPVLPASLAYVLL  N+VLTPGSLMTAFLT
Sbjct: 362 -SAEGSRTNTDSIFDIGMETIKLGWKEYIQQPVLPASLAYVLLYFNIVLTPGSLMTAFLT 420

Query: 240 QRGLNPSIIGGFSGLCASMGVAATFLSAYLVRRLGILKAGAAGLIFQASLLAMAVAVYWS 299
           QR +NPS+IGGFSGLCA MGVAATFLSA LV+R+GILKAGA GL FQASLLA+AVAVY S
Sbjct: 421 QRCVNPSVIGGFSGLCAVMGVAATFLSANLVKRVGILKAGAVGLFFQASLLAVAVAVYCS 480

Query: 300 GSLSQQNPLLFFLCLIVLSRLGHMSYDIVGAQILQTGIPSSKANLIGTTEISVASLVESV 359
            SLSQ++PL FFL +IVLSRLGHMSY +VGAQILQTGIPSSKANLIG TEISVASL ES+
Sbjct: 481 SSLSQKSPLFFFLSMIVLSRLGHMSYGVVGAQILQTGIPSSKANLIGATEISVASLAESL 540

Query: 360 MLGVAIIANDVSHFGFLATLSLLSVVGAAWMFCHWLLNPTDEQRSLFSFDPQS 412
           MLGVAI AND SHFGFLA LSLLSVV A+ +FC  L NPTDEQR LFSFDP S
Sbjct: 541 MLGVAIAANDASHFGFLAVLSLLSVVAASLIFCRLLRNPTDEQRRLFSFDPLS 593

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356535006|ref|XP_003536040.1| PREDICTED: solute carrier family 40 member 1-like [Glycine max]

 Score =  603 bits (1555), Expect = e-170,   Method: Compositional matrix adjust.
 Identities = 316/412 (76%), Positives = 359/412 (87%), Gaps = 1/412 (0%)

Query: 1   MGFFSKLILIVGGPLVGKLMDHSPRIPAYICLNTVQAAAQLLSAAMIIHAHTVIPTS-SS 59
           M FF+K+ +IVGGPLVGKLMDH PR+ AY CL  VQA AQLLSAAMII AH+V PTS S+
Sbjct: 175 MSFFTKVAIIVGGPLVGKLMDHFPRVSAYNCLTIVQATAQLLSAAMIIRAHSVQPTSFST 234

Query: 60  MLLHPWFFVLVLAGAVERLTGVALGVAVERDWAVLLAGINRPIALAKANAVLNRIDLLCE 119
           +LL PWF +LV AGA+ERL GVALGVA ERDW VLLAG+NRPIALA+ANAVLNRIDLLCE
Sbjct: 235 LLLRPWFVILVSAGAIERLCGVALGVANERDWVVLLAGVNRPIALAQANAVLNRIDLLCE 294

Query: 120 IAGASLFGILLSKYEPVTCLKFAAGLIMWSLPVMIILTWFTNKISSGVLDRAKCSQSCCR 179
           IAGA LFG LLSK+ PV CLK A+GL+M  LPV I+  + TNK+S+GVLDR K SQ+CCR
Sbjct: 295 IAGAMLFGFLLSKFHPVICLKVASGLMMGLLPVTIVFNYLTNKLSTGVLDRPKPSQTCCR 354

Query: 180 TSNEGPVPDADNIVDVGIEAIKLGWKEYMQQPVLPASLAYVLLCLNVVLTPGSLMTAFLT 239
           T NE    DA +IV  G+EAIKLGWKEY+ QPVLPASLA+VLLC N+VLTPGSL+TAFLT
Sbjct: 355 TFNEDSALDASSIVFKGLEAIKLGWKEYLGQPVLPASLAWVLLCFNIVLTPGSLLTAFLT 414

Query: 240 QRGLNPSIIGGFSGLCASMGVAATFLSAYLVRRLGILKAGAAGLIFQASLLAMAVAVYWS 299
           QRGL+PSIIGGFSG+CA MGVAATF+S+ LV++ GILKAGA GL+FQA LL+MAVAVYWS
Sbjct: 415 QRGLHPSIIGGFSGMCALMGVAATFVSSTLVKQFGILKAGAVGLVFQALLLSMAVAVYWS 474

Query: 300 GSLSQQNPLLFFLCLIVLSRLGHMSYDIVGAQILQTGIPSSKANLIGTTEISVASLVESV 359
           G++S Q+PLL FL LI+LSRLGHMSYD+VGAQILQTGIPSSKANLIGTTEI+VASL ES+
Sbjct: 475 GTISHQSPLLTFLFLIILSRLGHMSYDVVGAQILQTGIPSSKANLIGTTEIAVASLAESI 534

Query: 360 MLGVAIIANDVSHFGFLATLSLLSVVGAAWMFCHWLLNPTDEQRSLFSFDPQ 411
           MLGVAIIAND SHFG LA LSLLSVVGAAWMFC WLLNPTDEQ++LFS+DPQ
Sbjct: 535 MLGVAIIANDPSHFGCLALLSLLSVVGAAWMFCRWLLNPTDEQKNLFSYDPQ 586

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|218187076|gb|EEC69503.1| hypothetical protein OsI_38730 [Oryza sativa Indica Group]

 Score =  518 bits (1334), Expect = e-144,   Method: Compositional matrix adjust.
 Identities = 260/415 (62%), Positives = 318/415 (76%), Gaps = 9/415 (2%)

Query: 1   MGFFSKLILIVGGPLVGKLMDHSPRIPAYICLNTVQAAAQLLSAAMIIHA--HTVIPTSS 58
           +GFF+KL + +G P+VGKLMDH PRIP Y  LN VQ A QL+SAAM+I+A  +    ++S
Sbjct: 176 VGFFTKLSVFIGAPIVGKLMDHFPRIPMYTGLNAVQVATQLISAAMVIYAMKNVTHASTS 235

Query: 59  SMLLHPWFFVLVLAGAVERLTGVALGVAVERDWAVLLAGINRPIALAKANAVLNRIDLLC 118
           +++L PWF  LV AGA+ERL G+ALGVA+ERDW VLLAG NRP+ALA+ANAVLNR+DL+C
Sbjct: 236 AVVLKPWFIALVAAGAIERLAGLALGVAMERDWVVLLAGTNRPVALAQANAVLNRLDLVC 295

Query: 119 EIAGASLFGILLSKYEPVTCLKFAAGLIMWSLPVMIILTWFTNKISSGVLD--RAKCSQS 176
           E  GAS+FG+LLSKY PVTCLK A GL++ S PV+++L    N+ S   LD  R    +S
Sbjct: 296 ETVGASVFGLLLSKYHPVTCLKIACGLMICSFPVLVVLGQLINRFSCHALDSSRTPSDES 355

Query: 177 CCRTSNEGPVPDADNIVDVGIEAIKLGWKEYMQQPVLPASLAYVLLCLNVVLTPGSLMTA 236
            C       + D   IV  G+ AI+ GW EY QQ VLPAS+A V L  NV L PG++MTA
Sbjct: 356 ICAN-----LLDVRKIVQNGLSAIRNGWNEYKQQTVLPASVATVFLNFNVALAPGAIMTA 410

Query: 237 FLTQRGLNPSIIGGFSGLCASMGVAATFLSAYLVRRLGILKAGAAGLIFQASLLAMAVAV 296
            L  RG++PSI+G FSGLC+ MG+ ATF+S+ LV R+GILKAGAAGLI QASLL++A+ V
Sbjct: 411 LLMHRGISPSIVGAFSGLCSIMGLVATFISSSLVERVGILKAGAAGLIVQASLLSVALVV 470

Query: 297 YWSGSLSQQNPLLFFLCLIVLSRLGHMSYDIVGAQILQTGIPSSKANLIGTTEISVASLV 356
           YW+GS+SQ+ PLL FL  I LSRLGHMSYD+VG QILQTG+P+SKANLIG  E+S++SL 
Sbjct: 471 YWTGSISQRTPLLIFLAAIALSRLGHMSYDVVGTQILQTGVPASKANLIGGMEVSISSLA 530

Query: 357 ESVMLGVAIIANDVSHFGFLATLSLLSVVGAAWMFCHWLLNPTDEQRSLFSFDPQ 411
           E VMLG+AIIANDVSHFGFLA LS+ SV GAAWMFC WL NPTDEQR LF FDP 
Sbjct: 531 ELVMLGMAIIANDVSHFGFLAILSVSSVAGAAWMFCQWLGNPTDEQRELFMFDPH 585

Source: Oryza sativa Indica Group

Species: Oryza sativa

Genus: Oryza

Family: Poaceae

Order: Poales

Class: Liliopsida

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|115489078|ref|NP_001067026.1| Os12g0562100 [Oryza sativa Japonica Group] gi|122203497|sp|Q2QNK7.1|S40A2_ORYSJ RecName: Full=Solute carrier family 40 member 2, chloroplastic; Flags: Precursor gi|77556150|gb|ABA98946.1| flagellar biosynthesis protein FLHA, putative, expressed [Oryza sativa Japonica Group] gi|113649533|dbj|BAF30045.1| Os12g0562100 [Oryza sativa Japonica Group] gi|215694030|dbj|BAG89229.1| unnamed protein product [Oryza sativa Japonica Group]

 Score =  518 bits (1334), Expect = e-144,   Method: Compositional matrix adjust.
 Identities = 260/415 (62%), Positives = 318/415 (76%), Gaps = 9/415 (2%)

Query: 1   MGFFSKLILIVGGPLVGKLMDHSPRIPAYICLNTVQAAAQLLSAAMIIHA--HTVIPTSS 58
           +GFF+KL + +G P+VGKLMDH PRIP Y  LN VQ A QL+SAAM+I+A  +    ++S
Sbjct: 176 VGFFTKLSVFIGAPIVGKLMDHFPRIPMYTGLNAVQVATQLISAAMVIYAMKNVTHASTS 235

Query: 59  SMLLHPWFFVLVLAGAVERLTGVALGVAVERDWAVLLAGINRPIALAKANAVLNRIDLLC 118
           +++L PWF  LV AGA+ERL G+ALGVA+ERDW VLLAG NRP+ALA+ANAVLNR+DL+C
Sbjct: 236 AVVLKPWFIALVAAGAIERLAGLALGVAMERDWVVLLAGTNRPVALAQANAVLNRLDLVC 295

Query: 119 EIAGASLFGILLSKYEPVTCLKFAAGLIMWSLPVMIILTWFTNKISSGVLD--RAKCSQS 176
           E  GAS+FG+LLSKY PVTCLK A GL++ S PV+++L    N+ S   LD  R    +S
Sbjct: 296 ETVGASVFGLLLSKYHPVTCLKIACGLMICSFPVLVVLGQLINRFSCHALDSSRTPSEES 355

Query: 177 CCRTSNEGPVPDADNIVDVGIEAIKLGWKEYMQQPVLPASLAYVLLCLNVVLTPGSLMTA 236
            C       + D   IV  G+ AI+ GW EY QQ VLPAS+A V L  NV L PG++MTA
Sbjct: 356 ICAN-----LLDVRKIVQNGLSAIRNGWNEYKQQTVLPASVATVFLNFNVALAPGAIMTA 410

Query: 237 FLTQRGLNPSIIGGFSGLCASMGVAATFLSAYLVRRLGILKAGAAGLIFQASLLAMAVAV 296
            L  RG++PSI+G FSGLC+ MG+ ATF+S+ LV R+GILKAGAAGLI QASLL++A+ V
Sbjct: 411 LLMHRGISPSIVGAFSGLCSIMGLVATFISSSLVERVGILKAGAAGLIVQASLLSVALVV 470

Query: 297 YWSGSLSQQNPLLFFLCLIVLSRLGHMSYDIVGAQILQTGIPSSKANLIGTTEISVASLV 356
           YW+GS+SQ+ PLL FL  I LSRLGHMSYD+VG QILQTG+P+SKANLIG  E+S++SL 
Sbjct: 471 YWTGSISQRTPLLIFLAAIALSRLGHMSYDVVGTQILQTGVPASKANLIGGMEVSISSLA 530

Query: 357 ESVMLGVAIIANDVSHFGFLATLSLLSVVGAAWMFCHWLLNPTDEQRSLFSFDPQ 411
           E VMLG+AIIANDVSHFGFLA LS+ SV GAAWMFC WL NPTDEQR LF FDP 
Sbjct: 531 ELVMLGMAIIANDVSHFGFLAILSVSSVAGAAWMFCQWLGNPTDEQRELFMFDPH 585

Source: Oryza sativa Japonica Group

Species: Oryza sativa

Genus: Oryza

Family: Poaceae

Order: Poales

Class: Liliopsida

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	412
TAIR|locus:2148523	598	IREG3 "iron-regulated protein	0.995	0.685	0.750	3.7e-158
ASPGD|ASPL0000000841	471	AN6845 [Emericella nidulans (t	0.905	0.791	0.266	1.1e-21
TAIR|locus:2142649	512	IREG2 "iron regulated 2" [Arab	0.429	0.345	0.274	5.1e-19
UNIPROTKB|Q9NP59	571	SLC40A1 "Solute carrier family	0.361	0.260	0.246	1.6e-18
UNIPROTKB|F1NWJ7	581	ORMDL1 "Uncharacterized protei	0.359	0.254	0.275	3.6e-18
TAIR|locus:2057222	524	IREG1 "AT2G38460" [Arabidopsis	0.444	0.349	0.288	7.4e-18
MGI|MGI:1315204	570	Slc40a1 "solute carrier family	0.361	0.261	0.246	2.5e-17
ZFIN|ZDB-GENE-100922-17	549	si:ch211-254p10.2 "si:ch211-25	0.366	0.275	0.25	2.4e-15
UNIPROTKB|F1RXV2	575	Ssc.90898 "Uncharacterized pro	0.361	0.259	0.227	7.3e-15
RGD|620180	570	Slc40a1 "solute carrier family	0.361	0.261	0.246	1.9e-14

TAIR|locus:2148523 IREG3 "iron-regulated protein 3" [Arabidopsis thaliana (taxid:3702)]

 Score = 1541 (547.5 bits), Expect = 3.7e-158, P = 3.7e-158
 Identities = 310/413 (75%), Positives = 348/413 (84%)

Query:     1 MGFFSKLILIVGGPLVGKLMDHSPRIPAYICLNTVQAAAQLLSAAMIIHAHTVIPTS-SS 59
             MGF +KL +I GGP+VGK MD+SPR+P YI LN +QAAAQ+LSA MIIHA+TV  TS SS
Sbjct:   187 MGFVTKLAIIAGGPVVGKFMDYSPRVPTYISLNVIQAAAQVLSAGMIIHAYTVPSTSASS 246

Query:    60 MLLHPWFFVLVLAGAVERLTGVALGVAVERDWAVLLAGINRPIALAKANAVLNRIDLLCE 119
             +LL PWFF L+ AGA++ L G+A GVA+ERDW VLLAGINRPIALA+ANAVL+RIDLLCE
Sbjct:   247 ILLQPWFFALLFAGAIDSLCGIASGVAIERDWVVLLAGINRPIALAQANAVLHRIDLLCE 306

Query:   120 IAGASLFGILLSKYEPVTCLKFAAGLIMWSLPVMIILTWFTNKISSGVLDRAKCSQSCCR 179
             IAG  LFGILLSKY+PVTCLKFAA L++ SLP M  L W TNK SSGVLDR KCS + C 
Sbjct:   307 IAGTMLFGILLSKYDPVTCLKFAATLMVGSLPTMTALIWLTNKFSSGVLDRPKCSLNSC- 365

Query:   180 TSNEGPVPDADNIVDVGIEAIKLGWKEYMQQPVLPASLAYVLLCLNVVLTPGSLMTAFLT 239
              S EG   + D+I D+G+E IKLGWKEY+QQPVLPASLAYVLL  N+VLTPGSLMTAFLT
Sbjct:   366 -SAEGSRTNTDSIFDIGMETIKLGWKEYIQQPVLPASLAYVLLYFNIVLTPGSLMTAFLT 424

Query:   240 QRGLNPSIIGGFSGLCASMGVAATFLSAYLVRRLGILKAGAAGLIFQASLLAMAVAVYWS 299
             QR +NPS+IGGFSGLCA MGVAATFLSA LV+R+GILKAGA GL FQASLLA+AVAVY S
Sbjct:   425 QRCVNPSVIGGFSGLCAVMGVAATFLSANLVKRVGILKAGAVGLFFQASLLAVAVAVYCS 484

Query:   300 GSLSQQNPLLFFLCLIVLSRLGHMSYDIVGAQILQTGIPSSKANLIGTTEISVASLVESV 359
              SLS ++PL FFL +IVLSRLGHMSY +VGAQILQTGIPSSKANLIG TEISVASL ES+
Sbjct:   485 SSLSHKSPLFFFLSMIVLSRLGHMSYGVVGAQILQTGIPSSKANLIGATEISVASLAESL 544

Query:   360 MLGVAIIANDVSHFGFLATLSLLSVVGAAWMFCHWLLNPTDEQRSLFSFDPQS 412
             MLGVAI AND SHFGFLA LSLLSVV A+ +FC  L NPTDEQR LFSFDP S
Sbjct:   545 MLGVAIAANDASHFGFLAVLSLLSVVAASLIFCRLLRNPTDEQRRLFSFDPLS 597

GO:0005381 "iron ion transmembrane transporter activity" evidence=IEA

GO:0005886 "plasma membrane" evidence=ISM

GO:0016021 "integral to membrane" evidence=IEA

GO:0034755 "iron ion transmembrane transport" evidence=IEA

GO:0016020 "membrane" evidence=ISS

GO:0005215 "transporter activity" evidence=IDA

GO:0006879 "cellular iron ion homeostasis" evidence=IMP

GO:0009941 "chloroplast envelope" evidence=IDA

ASPGD|ASPL0000000841 AN6845 [Emericella nidulans (taxid:162425)]

 Score = 273 (101.2 bits), Expect = 1.1e-21, P = 1.1e-21
 Identities = 107/402 (26%), Positives = 182/402 (45%)

Query:     7 LILIVGGPLVGKLMDHSPRIPAY---ICLNTVQAAAQLLSAAMIIHAHTVIPTSSSMLLH 63
             L  ++    +G L+D + R+ A    I    +  A   +   +++ +    P   S LL 
Sbjct:    67 LFAVLFSSWLGSLVDRTDRLSAIRHSIIWQRIPVAVSCVCLGLLLRSP---PGHLSRLL- 122

Query:    64 PWFFVLVLAGAVERLTGVALGVAVERDWAVLLAGINRPIALAKANAVLNRIDLLCEIAGA 123
               F  LVL   VE+L      V+VERDWAV+++     ++    NA + RIDL C++   
Sbjct:   123 --FIALVLLAGVEKLAATVNTVSVERDWAVVISE-TLLVSRKDLNASMRRIDLFCKLVAP 179

Query:   124 SLFGILLSKYEPVTCLKFAAGLIMWSLPVMIILTWFTNK-ISSGV--LDRAKCSQSCCRT 180
                 +++S  + +   K A   ++     ++++ +F    +   V  LDR+   Q+    
Sbjct:   180 ----VVVSLMDGLLSTKVAIWAVLGVNVTVVLVEYFAIAGVYHSVPQLDRSHERQAADDE 235

Query:   181 SNEG-PVPD--ADNIVDVGIEAIKLGWKEYMQQPVLPASLAYVLLCLNVVLTPGSLMTAF 237
              +E  P+ +  A NI    I      W+EY+ Q V  AS A  LL L V L+ G  M  F
Sbjct:   236 EDEQQPLEEHLAQNIFAQYIRRTVAPWREYVGQSVFLASFALSLLYLTV-LSFGPTMVTF 294

Query:   238 LTQRGLNPSIIGGFSGLCASMGVAATFLSAYLVRRLGILKAGAAGLIFQASLLAMAVAVY 297
             L   G +   +           ++ T+++  L+ R+G +++G   L +Q   LA AVA +
Sbjct:   295 LLHSGFSSLDVSAMRIGAVLTEISGTWMAPLLMDRIGPIRSGLWFLNWQFGTLAAAVAAF 354

Query:   298 WSGSLSQQNPLLFFLCLIV---LSRLGHMSYDIVGAQILQTGI-PSSKANLIGTTEISVA 353
                + +   P L   CLI    LSRLG   +D+    ++Q  I PSS+A     TE+++ 
Sbjct:   355 ---AFASDRPRLVAGCLITGVALSRLGLWGFDLSVQFLVQENIDPSSRARF-SATEMALQ 410

Query:   354 SLVESVMLGVAIIANDVSHFGFLATLSLLSVVGAAWMFCHWL 395
             S+ E +     I   D   F +   +S  ++  AA  F  ++
Sbjct:   411 SVFEMISFATTIFFADPDQFKYPVYISYGAIALAAVCFAAYV 452

GO:0034755 "iron ion transmembrane transport" evidence=IEA

GO:0005381 "iron ion transmembrane transporter activity" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

TAIR|locus:2142649 IREG2 "iron regulated 2" [Arabidopsis thaliana (taxid:3702)]

 Score = 170 (64.9 bits), Expect = 5.1e-19, Sum P(2) = 5.1e-19
 Identities = 50/182 (27%), Positives = 89/182 (48%)

Query:   204 WKEYMQQPVLPASLAYVLLCLNVVLTPGSLMTAFLTQRGLNPSIIGGFSGLCASMGVAAT 263
             W+ Y+ Q ++   ++  LL   V L+ G+LMTA L  +G+   IIG   G+ A +G+AAT
Sbjct:   302 WRNYLNQEIVLPGVSLALLFFTV-LSFGTLMTATLEWKGIPTYIIGIGRGISAGVGLAAT 360

Query:   264 FLSAYLVRRLGILKAGAAGLIFQASLLAMAVAVYWSGSLSQQNPLLFFLCL-IVLSRLGH 322
              L   +  R+  L+ G      Q + L + V   W   + ++    + L   +  SRLG 
Sbjct:   361 VLYPLMQSRISPLRTGVWSFWSQWTCLLVCVGSIW---VEKEKIASYMLMAGVAASRLGL 417

Query:   323 MSYDIVGAQILQTGIPSSKANLIGTTEISVASLVESVMLGVAIIANDVSHFGFLATLSLL 382
               +D+   Q +Q  +P S   ++G  + S+ S ++ +   + II ++   F  L  +S  
Sbjct:   418 WMFDLAVIQQMQDLVPESDRCVVGGVQNSLQSALDLMANLLGIIVSNPKDFWMLTLISFA 477

Query:   383 SV 384
             +V
Sbjct:   478 TV 479

GO:0005381 "iron ion transmembrane transporter activity" evidence=IEA;IMP

GO:0016021 "integral to membrane" evidence=IEA

GO:0034755 "iron ion transmembrane transport" evidence=IEA

GO:0000041 "transition metal ion transport" evidence=RCA;IMP

GO:0009705 "plant-type vacuole membrane" evidence=IDA

GO:0015099 "nickel cation transmembrane transporter activity" evidence=IGI

GO:0006824 "cobalt ion transport" evidence=IMP

GO:0006826 "iron ion transport" evidence=RCA;IMP

GO:0015087 "cobalt ion transmembrane transporter activity" evidence=IMP

GO:0015675 "nickel cation transport" evidence=IMP

GO:0055068 "cobalt ion homeostasis" evidence=IMP

GO:0010106 "cellular response to iron ion starvation" evidence=RCA

GO:0010167 "response to nitrate" evidence=RCA

GO:0015706 "nitrate transport" evidence=RCA

UNIPROTKB|Q9NP59 SLC40A1 "Solute carrier family 40 member 1" [Homo sapiens (taxid:9606)]

 Score = 146 (56.5 bits), Expect = 1.6e-18, Sum P(3) = 1.6e-18
 Identities = 38/154 (24%), Positives = 72/154 (46%)

Query:     9 LIVGGPLVGKLMDHSPRIPAYICLNTVQAAAQLLSAAMI----IHAHTVIPTSSSMLLHP 64
             ++V G ++G  +D + R+        VQ  + +L   ++    +H H ++      +L  
Sbjct:    72 VLVLGAIIGDWVDKNARLKVAQTSLVVQNVSVILCGIILMMVFLHKHELLTMYHGWVLTS 131

Query:    65 WFFVLVLAGAVERLTGVALGVAVERDWAVLLAGINRPIALAKANAVLNRIDLLCEIAGAS 124
              + +++    +  L   A  + ++RDW V++AG +R   LA  NA + RID L  I    
Sbjct:   132 CYILIITIANIANLASTATAITIQRDWIVVVAGEDRS-KLANMNATIRRIDQLTNILAPM 190

Query:   125 LFGILLSKYEPVTCLKFAAGLIMWSLPVMIILTW 158
               G +++   PV    F +G  + S+ V  +L W
Sbjct:   191 AVGQIMTFGSPVIGCGFISGWNLVSMCVEYVLLW 224

GO:0002260 "lymphocyte homeostasis" evidence=IEA

GO:0003158 "endothelium development" evidence=IEA

GO:0005771 "multivesicular body" evidence=IEA

GO:0006915 "apoptotic process" evidence=IEA

GO:0008021 "synaptic vesicle" evidence=IEA

GO:0060345 "spleen trabecula formation" evidence=IEA

GO:0060586 "multicellular organismal iron ion homeostasis" evidence=IEA

GO:0005737 "cytoplasm" evidence=TAS

GO:0009653 "anatomical structure morphogenesis" evidence=TAS

GO:0016021 "integral to membrane" evidence=TAS

GO:0005886 "plasma membrane" evidence=IDA;TAS

GO:0006879 "cellular iron ion homeostasis" evidence=IMP;TAS

GO:0055085 "transmembrane transport" evidence=TAS

GO:0005515 "protein binding" evidence=IPI

GO:0005887 "integral to plasma membrane" evidence=IC

GO:0005381 "iron ion transmembrane transporter activity" evidence=IMP

GO:0034755 "iron ion transmembrane transport" evidence=IMP

UNIPROTKB|F1NWJ7 ORMDL1 "Uncharacterized protein" [Gallus gallus (taxid:9031)]

 Score = 144 (55.7 bits), Expect = 3.6e-18, Sum P(3) = 3.6e-18
 Identities = 43/156 (27%), Positives = 75/156 (48%)

Query:     8 ILIVGGPLVGKLMDHSPRIPAYICLNTVQAAAQLLSAAMIIHAHTVIPTSSSMLLHPWF- 66
             +L++G  ++G  +D + R+        VQ A+ +L   +I+    +  T    L H W  
Sbjct:    73 VLLLGA-IIGDWVDKNSRLKVAQTSLVVQNASVIL-CGIILMIIFLFKTQLLTLYHGWLL 130

Query:    67 ---FVLVLAGA-VERLTGVALGVAVERDWAVLLAGINRPIALAKANAVLNRIDLLCEIAG 122
                ++LV+  A +  L   A  + ++RDW V++AG +R   LA  NA + RID L  I  
Sbjct:   131 TMCYILVITIANIANLASTATAITIQRDWIVVVAGEDRS-KLADMNATIRRIDQLTNILA 189

Query:   123 ASLFGILLSKYEPVTCLKFAAGLIMWSLPVMIILTW 158
                 G +++   P+    F +G  + S+ V  +L W
Sbjct:   190 PMAVGQIMTFGSPMIGCGFISGWNLMSMCVEYLLLW 225

GO:0016021 "integral to membrane" evidence=IEA

GO:0002260 "lymphocyte homeostasis" evidence=IEA

GO:0003158 "endothelium development" evidence=IEA

GO:0005381 "iron ion transmembrane transporter activity" evidence=IEA

GO:0005771 "multivesicular body" evidence=IEA

GO:0005886 "plasma membrane" evidence=IEA

GO:0006879 "cellular iron ion homeostasis" evidence=IEA

GO:0006915 "apoptotic process" evidence=IEA

GO:0008021 "synaptic vesicle" evidence=IEA

GO:0060345 "spleen trabecula formation" evidence=IEA

GO:0060586 "multicellular organismal iron ion homeostasis" evidence=IEA

TAIR|locus:2057222 IREG1 "AT2G38460" [Arabidopsis thaliana (taxid:3702)]

 Score = 162 (62.1 bits), Expect = 7.4e-18, Sum P(2) = 7.4e-18
 Identities = 54/187 (28%), Positives = 88/187 (47%)

Query:   204 WKEYMQQPVLPASLAYVLLCLNVVLTPGSLMTAFLTQRGLNPSIIGGFSGLCASMGVAAT 263
             W+ Y  Q V+   ++  LL   V L+ G+LMTA L   G+   IIG   G+ A++G+AAT
Sbjct:   306 WRIYFNQEVVLPGVSLALLFFTV-LSFGTLMTATLQWEGIPTYIIGIGRGISATVGLAAT 364

Query:   264 FLSAYLVRRLGILKAGAAGLIFQASLLAMAVAVYWSGSLSQQNPLLFFLCLIVLSRLGHM 323
              +   +  RL  L+ G      Q S L + V   W       + +L  +  +  SRLG  
Sbjct:   365 LVYPLMQSRLSTLRTGLWSFWSQWSCLLVCVGSIWVKKDKIASYML--MAGVAASRLGLW 422

Query:   324 SYDIVGAQILQTGIPSSKANLIGTTEISVASLVESVMLGVAIIANDVSHFGFLATLSLLS 383
              +D+   Q +Q  +  S   ++G  + S+ S ++ +   + II ++   F  L  +S  S
Sbjct:   423 MFDLAVIQQMQDLVSESDRCVVGGVQNSLQSALDLMAYLLGIIVSNPKDFWILTLISF-S 481

Query:   384 VVGAAWM 390
              V  A M
Sbjct:   482 TVSLAGM 488

GO:0005215 "transporter activity" evidence=ISS

GO:0005381 "iron ion transmembrane transporter activity" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

GO:0034755 "iron ion transmembrane transport" evidence=IEA

GO:0005886 "plasma membrane" evidence=IDA

GO:0006824 "cobalt ion transport" evidence=IMP

MGI|MGI:1315204 Slc40a1 "solute carrier family 40 (iron-regulated transporter), member 1" [Mus musculus (taxid:10090)]

 Score = 139 (54.0 bits), Expect = 2.5e-17, Sum P(3) = 2.5e-17
 Identities = 38/154 (24%), Positives = 71/154 (46%)

Query:     9 LIVGGPLVGKLMDHSPRIPAYICLNTVQAAAQLLSAAMI----IHAHTVIPTSSSMLLHP 64
             ++V G ++G  +D + R+        VQ  + +L   ++    +H + ++      +L  
Sbjct:    72 VLVLGAIIGDWVDKNARLKVAQTSLVVQNVSVILCGIILMMVFLHKNELLTMYHGWVLTV 131

Query:    65 WFFVLVLAGAVERLTGVALGVAVERDWAVLLAGINRPIALAKANAVLNRIDLLCEIAGAS 124
              + +++    +  L   A  + ++RDW V++AG NR   LA  NA + RID L  I    
Sbjct:   132 CYILIITIANIANLASTATAITIQRDWIVVVAGENRS-RLADMNATIRRIDQLTNILAPM 190

Query:   125 LFGILLSKYEPVTCLKFAAGLIMWSLPVMIILTW 158
               G +++   PV    F +G  + S+ V   L W
Sbjct:   191 AVGQIMTFGSPVIGCGFISGWNLVSMCVEYFLLW 224

GO:0002260 "lymphocyte homeostasis" evidence=IMP

GO:0003158 "endothelium development" evidence=IMP

GO:0005381 "iron ion transmembrane transporter activity" evidence=ISO;IDA

GO:0005515 "protein binding" evidence=IPI

GO:0005771 "multivesicular body" evidence=IDA

GO:0005886 "plasma membrane" evidence=IDA

GO:0006810 "transport" evidence=IEA

GO:0006811 "ion transport" evidence=IEA

GO:0006826 "iron ion transport" evidence=IDA

GO:0006879 "cellular iron ion homeostasis" evidence=ISO

GO:0006915 "apoptotic process" evidence=IMP

GO:0008021 "synaptic vesicle" evidence=IDA

GO:0016020 "membrane" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

GO:0034755 "iron ion transmembrane transport" evidence=ISO;IDA

GO:0048536 "spleen development" evidence=IMP

GO:0055072 "iron ion homeostasis" evidence=IEA

GO:0060345 "spleen trabecula formation" evidence=IMP

GO:0060586 "multicellular organismal iron ion homeostasis" evidence=IMP

ZFIN|ZDB-GENE-100922-17 si:ch211-254p10.2 "si:ch211-254p10.2" [Danio rerio (taxid:7955)]

 Score = 121 (47.7 bits), Expect = 2.4e-15, Sum P(3) = 2.4e-15
 Identities = 40/160 (25%), Positives = 73/160 (45%)

Query:     8 ILIVGGPLVGKLMDHSPRIP-AYICL---NTVQAAAQLLSAAMIIHAHTVIPTSSSMLLH 63
             +L++G  L+G  +D +PR   A+  L   NT      ++   +  +   +       L  
Sbjct:    73 VLLLGA-LIGDWVDRNPRNKVAHASLFIQNTSVTVCSIVLMLVFSYKKWIEEIWDGWLTV 131

Query:    64 PWFFVLVLAGAVERLTGVALGVAVERDWAVLLAGINRPIALAKANAVLNRIDLLCEIAGA 123
               + V+++   V  L   AL +A++RDW V++ G NR   LA  NA + RID +  I   
Sbjct:   132 VCYTVVIILADVANLASTALTIAIQRDWIVVITGYNRG-HLAGMNATMRRIDQVTNILAP 190

Query:   124 SLFGILLSKYEPVTCLKFAAGLIMWSLPVMIILTWFTNKI 163
                G +++    V    F  G   W++  +I+   F +++
Sbjct:   191 LAVGQVMTLASNVVGCGFILG---WNVVSLIVEFIFLSRV 227

GO:0034755 "iron ion transmembrane transport" evidence=IEA

GO:0005381 "iron ion transmembrane transporter activity" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

UNIPROTKB|F1RXV2 Ssc.90898 "Uncharacterized protein" [Sus scrofa (taxid:9823)]

 Score = 122 (48.0 bits), Expect = 7.3e-15, Sum P(3) = 7.3e-15
 Identities = 35/154 (22%), Positives = 69/154 (44%)

Query:     9 LIVGGPLVGKLMDHSPRIPAYICLNTVQAAAQLLSAAMI----IHAHTVIPTSSSMLLHP 64
             ++V G ++G  +D + R+        +Q  + +L   ++    +H   ++      +L  
Sbjct:    72 VLVLGAIIGDWVDKNARLKVAQTSLVIQNVSVILCGIILMMVFLHKDELLTMYHGWVLTS 131

Query:    65 WFFVLVLAGAVERLTGVALGVAVERDWAVLLAGINRPIALAKANAVLNRIDLLCEIAGAS 124
              + +++    +  L   A  + ++RDW V++AG +R   LA  NA + RID L  I    
Sbjct:   132 CYILIITIANIANLASTATTITIQRDWIVVVAGEDRS-KLADMNATIRRIDQLTNILAPM 190

Query:   125 LFGILLSKYEPVTCLKFAAGLIMWSLPVMIILTW 158
               G +++    V    F +G  + S+ V   L W
Sbjct:   191 AVGQIMTFGSAVIGCGFISGWNLVSMCVEYFLLW 224

GO:0016021 "integral to membrane" evidence=IEA

GO:0005381 "iron ion transmembrane transporter activity" evidence=IEA

RGD|620180 Slc40a1 "solute carrier family 40 (iron-regulated transporter), member 1" [Rattus norvegicus (taxid:10116)]

 Score = 138 (53.6 bits), Expect = 1.9e-14, Sum P(3) = 1.9e-14
 Identities = 38/154 (24%), Positives = 71/154 (46%)

Query:     9 LIVGGPLVGKLMDHSPRIPAYICLNTVQAAAQLLSAAMI----IHAHTVIPTSSSMLLHP 64
             ++V G ++G  +D + R+        VQ  + +L   ++    +H + ++      +L  
Sbjct:    72 VLVLGAIIGDWVDKNARLKVAQTSLVVQNVSVILCGIILMMVFLHKNELLNMYHGWVLTV 131

Query:    65 WFFVLVLAGAVERLTGVALGVAVERDWAVLLAGINRPIALAKANAVLNRIDLLCEIAGAS 124
              + +++    +  L   A  + ++RDW V++AG NR   LA  NA + RID L  I    
Sbjct:   132 CYILIITIANIANLASTATAITIQRDWIVVVAGENRS-RLADMNATIRRIDQLTNILAPM 190

Query:   125 LFGILLSKYEPVTCLKFAAGLIMWSLPVMIILTW 158
               G +++   PV    F +G  + S+ V   L W
Sbjct:   191 AVGQIMTFGSPVIGCGFISGWNLVSMCVEYFLLW 224

GO:0002260 "lymphocyte homeostasis" evidence=ISO

GO:0003158 "endothelium development" evidence=ISO

GO:0005381 "iron ion transmembrane transporter activity" evidence=IEA;ISO;NAS

GO:0005771 "multivesicular body" evidence=ISO

GO:0005886 "plasma membrane" evidence=IEA;ISO

GO:0006826 "iron ion transport" evidence=ISO;NAS

GO:0006879 "cellular iron ion homeostasis" evidence=ISO

GO:0006915 "apoptotic process" evidence=ISO

GO:0008021 "synaptic vesicle" evidence=ISO

GO:0016021 "integral to membrane" evidence=IEA

GO:0034755 "iron ion transmembrane transport" evidence=ISO

GO:0048536 "spleen development" evidence=ISO

GO:0055072 "iron ion homeostasis" evidence=IEA

GO:0060345 "spleen trabecula formation" evidence=ISO

GO:0060586 "multicellular organismal iron ion homeostasis" evidence=ISO

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q8W4E7	S40A3_ARATH	No assigned EC number	0.7506	0.9951	0.6856	yes	no
Q2QNK7	S40A2_ORYSJ	No assigned EC number	0.6265	0.9854	0.6869	yes	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input: fgenesh4_pg.C_scaffold_131000100 ferroportin protein family (650 aa) (Populus trichocarpa)

Predicted Functional Partners:

Sorry, there are no predicted associations at the current settings.

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	412
pfam06963	432	pfam06963, FPN1, Ferroportin1 (FPN1)	1e-109

>gnl|CDD|219242 pfam06963, FPN1, Ferroportin1 (FPN1)

 Score =  327 bits (841), Expect = e-109
 Identities = 135/392 (34%), Positives = 199/392 (50%), Gaps = 10/392 (2%)

Query: 1   MGFFSKLILIVGGPLVGKLMDHSPRIPAYICLNTVQAAAQLLSAAMIIHAHTVIPTSS-- 58
            G    L  +V GP+VG+L+D  PR+ A      +Q  +  +S A+ I    V+   S  
Sbjct: 43  YGLVESLSALVLGPIVGQLVDRLPRLKAIRLSLLLQNLSVAVSGALFIALFVVLSLLSQA 102

Query: 59  SMLLHPWFFVLVLAGAVERLTGVALGVAVERDWAVLLAGINRPIALAKANAVLNRIDLLC 118
           S LL P F V VL  AV +L   A  VA+ERDW V+++G   P+ LAK NA L RIDL C
Sbjct: 103 SPLLIPLFAVTVLLAAVAKLASTANTVAIERDWVVVISG-GLPVVLAKMNATLRRIDLFC 161

Query: 119 EIAGASLFGILLSKYEPVTCLKFAAGLIMWSLPVMIILTWFTNKISSGVLDRAKCSQSCC 178
           ++    L G+LLS         F     + S+ V   L     K    +  +A+   S  
Sbjct: 162 KLLAPLLVGLLLSFVSLRAAAGFLLVWNLVSVVVEYFLLASVYKSVPALSRKAEVRTSRD 221

Query: 179 RTSNEGPV-----PDADNIVDVGIEAIKLGWKEYMQQPVLPASLAYVLLCLNVVLTPGSL 233
             +          P     V   ++  + GW+EY++QPV  AS A  LL   V L+ G+L
Sbjct: 222 EEAGSELQEPANRPSIVKRVKEYVKTQRDGWREYVRQPVFLASFALSLLYFTV-LSFGTL 280

Query: 234 MTAFLTQRGLNPSIIGGFSGLCASMGVAATFLSAYLVRRLGILKAGAAGLIFQASLLAMA 293
           MT +L  +GL+PS+IGG  G  A  G+A TF   +L +R+G+L+ G   L +Q S LA+A
Sbjct: 281 MTTYLLHQGLSPSVIGGMRGGSAVTGLAGTFAYPFLEKRIGLLRTGLWSLWWQLSCLALA 340

Query: 294 VAVYWSGSLSQQN-PLLFFLCLIVLSRLGHMSYDIVGAQILQTGIPSSKANLIGTTEISV 352
           VA  +                 + LSR+G  S+D+   Q++Q G+P S+ N++G  + S+
Sbjct: 341 VASVFLPGSPMSALSAFLLFGGVALSRIGLWSFDLAVTQLMQEGVPESERNVVGGVQNSL 400

Query: 353 ASLVESVMLGVAIIANDVSHFGFLATLSLLSV 384
            SL + +   + IIA D  HFG+L  +S  +V
Sbjct: 401 QSLFDLLKFALTIIAPDPEHFGYLVLISYGAV 432

This family represents a conserved region approximately 100 residues long within eukaryotic Ferroportin1 (FPN1), a protein that may play a role in iron export from the cell. This family may represent a number of transmembrane regions in Ferroportin1. Length = 432

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	412
PF06963	432	FPN1: Ferroportin1 (FPN1); InterPro: IPR009716 Thi	100.0
KOG2601	503	consensus Iron transporter [Inorganic ion transpor	100.0
PF05977	524	MFS_3: Transmembrane secretion effector; InterPro:	100.0
PRK11195	393	lysophospholipid transporter LplT; Provisional	99.9
PRK06814	1140	acylglycerophosphoethanolamine acyltransferase; Pr	99.86
PRK10489	417	enterobactin exporter EntS; Provisional	99.85
TIGR00900	365	2A0121 H+ Antiporter protein.	99.84
PRK15402	406	multidrug efflux system translocase MdfA; Provisio	99.8
PRK11102	377	bicyclomycin/multidrug efflux system; Provisional	99.77
TIGR00901	356	2A0125 AmpG-related permease.	99.77
PRK15403	413	multidrug efflux system protein MdtM; Provisional	99.76
PRK11646	400	multidrug resistance protein MdtH; Provisional	99.76
PRK03545	390	putative arabinose transporter; Provisional	99.76
TIGR00710	385	efflux_Bcr_CflA drug resistance transporter, Bcr/C	99.76
PRK11652	394	emrD multidrug resistance protein D; Provisional	99.75
PRK11043	401	putative transporter; Provisional	99.75
PRK08633	1146	2-acyl-glycerophospho-ethanolamine acyltransferase	99.75
PRK11902	402	ampG muropeptide transporter; Reviewed	99.74
PF07690	352	MFS_1: Major Facilitator Superfamily; InterPro: IP	99.74
PRK09874	408	drug efflux system protein MdtG; Provisional	99.74
PRK10213	394	nepI ribonucleoside transporter; Reviewed	99.73
TIGR00893	399	2A0114 d-galactonate transporter.	99.73
PRK12307	426	putative sialic acid transporter; Provisional	99.73
PRK05122	399	major facilitator superfamily transporter; Provisi	99.71
PRK11551	406	putative 3-hydroxyphenylpropionic transporter MhpT	99.71
PRK12382	392	putative transporter; Provisional	99.71
PRK10473	392	multidrug efflux system protein MdtL; Provisional	99.7
PRK11128	382	putative 3-phenylpropionic acid transporter; Provi	99.68
PRK10091	382	MFS transport protein AraJ; Provisional	99.68
TIGR00897	402	2A0118 polyol permease family. This family of prot	99.67
TIGR00891	405	2A0112 putative sialic acid transporter.	99.66
PRK14995	495	methyl viologen resistance protein SmvA; Provision	99.66
TIGR00890	377	2A0111 Oxalate/Formate Antiporter.	99.65
TIGR00899	375	2A0120 sugar efflux transporter. This family of pr	99.64
TIGR00881	379	2A0104 phosphoglycerate transporter family protein	99.64
COG2814	394	AraJ Arabinose efflux permease [Carbohydrate trans	99.63
PRK09705	393	cynX putative cyanate transporter; Provisional	99.63
PRK15011	393	sugar efflux transporter B; Provisional	99.62
PRK11273	452	glpT sn-glycerol-3-phosphate transporter; Provisio	99.61
PRK11010	491	ampG muropeptide transporter; Validated	99.6
PRK11663	434	regulatory protein UhpC; Provisional	99.6
PRK10504	471	putative transporter; Provisional	99.59
TIGR00902	382	2A0127 phenyl proprionate permease family protein.	99.59
TIGR00711	485	efflux_EmrB drug resistance transporter, EmrB/QacA	99.58
PRK03893	496	putative sialic acid transporter; Provisional	99.58
PRK10054	395	putative transporter; Provisional	99.58
TIGR02718	390	sider_RhtX_FptX siderophore transporter, RhtX/FptX	99.58
TIGR00883	394	2A0106 metabolite-proton symporter. This model rep	99.56
cd06174	352	MFS The Major Facilitator Superfamily (MFS) is a l	99.56
PRK10133	438	L-fucose transporter; Provisional	99.56
TIGR00895	398	2A0115 benzoate transport.	99.54
TIGR00892	455	2A0113 monocarboxylate transporter 1.	99.54
TIGR00879	481	SP MFS transporter, sugar porter (SP) family. This	99.53
PRK09528	420	lacY galactoside permease; Reviewed	99.52
TIGR00712	438	glpT glycerol-3-phosphate transporter. This model	99.52
TIGR00903	368	2A0129 major facilitator 4 family protein. This fa	99.51
TIGR00792	437	gph sugar (Glycoside-Pentoside-Hexuronide) transpo	99.5
PRK09556	467	uhpT sugar phosphate antiporter; Reviewed	99.5
TIGR00896	355	CynX cyanate transporter. This family of proteins	99.49
TIGR00889	418	2A0110 nucleoside transporter. This family of prot	99.47
PRK03633	381	putative MFS family transporter protein; Provision	99.45
TIGR00894	465	2A0114euk Na(+)-dependent inorganic phosphate cotr	99.45
PRK10406	432	alpha-ketoglutarate transporter; Provisional	99.44
PRK15075	434	citrate-proton symporter; Provisional	99.43
PRK03699	394	putative transporter; Provisional	99.41
TIGR00882	396	2A0105 oligosaccharide:H+ symporter.	99.41
PRK10077	479	xylE D-xylose transporter XylE; Provisional	99.4
TIGR00886	366	2A0108 nitrite extrusion protein (nitrite facilita	99.39
PRK09952	438	shikimate transporter; Provisional	99.38
PRK10642	490	proline/glycine betaine transporter; Provisional	99.37
TIGR00788	468	fbt folate/biopterin transporter. The only functio	99.36
TIGR02332	412	HpaX 4-hydroxyphenylacetate permease. This protein	99.36
TIGR00898	505	2A0119 cation transport protein.	99.35
PF11700	477	ATG22: Vacuole effluxer Atg22 like; InterPro: IPR0	99.33
PRK10429	473	melibiose:sodium symporter; Provisional	99.24
TIGR00885	410	fucP L-fucose:H+ symporter permease. This family d	99.21
PRK09848	448	glucuronide transporter; Provisional	99.21
PLN00028	476	nitrate transmembrane transporter; Provisional	99.2
PRK09669	444	putative symporter YagG; Provisional	99.18
TIGR01299	742	synapt_SV2 synaptic vesicle protein SV2. This mode	99.16
PF13347	428	MFS_2: MFS/sugar transport protein	99.15
COG2271	448	UhpC Sugar phosphate permease [Carbohydrate transp	99.11
TIGR00887	502	2A0109 phosphate:H+ symporter. This model represen	99.1
COG2807	395	CynX Cyanate permease [Inorganic ion transport and	99.06
TIGR00924	475	yjdL_sub1_fam amino acid/peptide transporter (Pept	99.03
TIGR01272	310	gluP glucose/galactose transporter. Disruption of	99.03
KOG2615	451	consensus Permease of the major facilitator superf	99.03
PRK11462	460	putative transporter; Provisional	99.0
PF03825	400	Nuc_H_symport: Nucleoside H+ symporter	98.99
PRK10207	489	dipeptide/tripeptide permease B; Provisional	98.92
PF03209	403	PUCC: PUCC protein; InterPro: IPR004896 This prote	98.88
COG2270	438	Permeases of the major facilitator superfamily [Ge	98.87
COG2211	467	MelB Na+/melibiose symporter and related transport	98.86
COG0738	422	FucP Fucose permease [Carbohydrate transport and m	98.86
TIGR00805	633	oat sodium-independent organic anion transporter.	98.82
PRK15034	462	nitrate/nitrite transport protein NarU; Provisiona	98.8
PRK09584	500	tppB putative tripeptide transporter permease; Rev	98.8
KOG1330	493	consensus Sugar transporter/spinster transmembrane	98.77
KOG0569	485	consensus Permease of the major facilitator superf	98.74
KOG2532	466	consensus Permease of the major facilitator superf	98.73
KOG3764	464	consensus Vesicular amine transporter [Intracellul	98.63
TIGR01301	477	GPH_sucrose GPH family sucrose/H+ symporter. This	98.57
PF01306	412	LacY_symp: LacY proton/sugar symporter; InterPro:	98.56
COG2223	417	NarK Nitrate/nitrite transporter [Inorganic ion tr	98.54
KOG2816	463	consensus Predicted transporter ADD1 (major facili	98.53
PF03092	433	BT1: BT1 family; InterPro: IPR004324 Members of th	98.48
PF07690	352	MFS_1: Major Facilitator Superfamily; InterPro: IP	98.41
PRK10489	417	enterobactin exporter EntS; Provisional	98.4
TIGR00710	385	efflux_Bcr_CflA drug resistance transporter, Bcr/C	98.37
TIGR00893	399	2A0114 d-galactonate transporter.	98.34
PRK15462	493	dipeptide/tripeptide permease D; Provisional	98.34
TIGR00900	365	2A0121 H+ Antiporter protein.	98.31
PRK11102	377	bicyclomycin/multidrug efflux system; Provisional	98.28
KOG2533	495	consensus Permease of the major facilitator superf	98.28
PF06609	599	TRI12: Fungal trichothecene efflux pump (TRI12); I	98.25
PF05631	354	DUF791: Protein of unknown function (DUF791); Inte	98.24
PRK11663	434	regulatory protein UhpC; Provisional	98.21
PRK11551	406	putative 3-hydroxyphenylpropionic transporter MhpT	98.2
TIGR00897	402	2A0118 polyol permease family. This family of prot	98.2
TIGR00895	398	2A0115 benzoate transport.	98.19
PRK10091	382	MFS transport protein AraJ; Provisional	98.18
PRK11646	400	multidrug resistance protein MdtH; Provisional	98.17
TIGR00881	379	2A0104 phosphoglycerate transporter family protein	98.17
PRK12382	392	putative transporter; Provisional	98.16
PRK10473	392	multidrug efflux system protein MdtL; Provisional	98.15
PRK05122	399	major facilitator superfamily transporter; Provisi	98.15
PRK03633	381	putative MFS family transporter protein; Provision	98.12
PRK10054	395	putative transporter; Provisional	98.11
TIGR00711	485	efflux_EmrB drug resistance transporter, EmrB/QacA	98.11
TIGR02332	412	HpaX 4-hydroxyphenylacetate permease. This protein	98.02
PRK03545	390	putative arabinose transporter; Provisional	98.02
TIGR00885	410	fucP L-fucose:H+ symporter permease. This family d	98.01
TIGR00891	405	2A0112 putative sialic acid transporter.	98.01
PRK11652	394	emrD multidrug resistance protein D; Provisional	98.01
cd06174	352	MFS The Major Facilitator Superfamily (MFS) is a l	98.0
TIGR00880	141	2_A_01_02 Multidrug resistance protein.	97.99
PRK10504	471	putative transporter; Provisional	97.99
PRK03699	394	putative transporter; Provisional	97.98
PRK10213	394	nepI ribonucleoside transporter; Reviewed	97.98
TIGR00924	475	yjdL_sub1_fam amino acid/peptide transporter (Pept	97.96
TIGR00712	438	glpT glycerol-3-phosphate transporter. This model	97.93
TIGR00890	377	2A0111 Oxalate/Formate Antiporter.	97.9
TIGR00806	511	rfc RFC reduced folate carrier. Proteins of the RF	97.88
TIGR00903	368	2A0129 major facilitator 4 family protein. This fa	97.88
PRK14995	495	methyl viologen resistance protein SmvA; Provision	97.87
TIGR00880	141	2_A_01_02 Multidrug resistance protein.	97.87
PRK11195	393	lysophospholipid transporter LplT; Provisional	97.86
PRK09874	408	drug efflux system protein MdtG; Provisional	97.85
PRK12307	426	putative sialic acid transporter; Provisional	97.84
KOG2504	509	consensus Monocarboxylate transporter [Carbohydrat	97.84
PRK03893	496	putative sialic acid transporter; Provisional	97.83
PRK15402	406	multidrug efflux system translocase MdfA; Provisio	97.82
PRK09705	393	cynX putative cyanate transporter; Provisional	97.82
TIGR00886	366	2A0108 nitrite extrusion protein (nitrite facilita	97.8
PRK10133	438	L-fucose transporter; Provisional	97.79
TIGR00896	355	CynX cyanate transporter. This family of proteins	97.77
PRK09556	467	uhpT sugar phosphate antiporter; Reviewed	97.76
PRK11043	401	putative transporter; Provisional	97.75
KOG0254	513	consensus Predicted transporter (major facilitator	97.74
PRK09528	420	lacY galactoside permease; Reviewed	97.7
PF05977	524	MFS_3: Transmembrane secretion effector; InterPro:	97.7
TIGR01299	742	synapt_SV2 synaptic vesicle protein SV2. This mode	97.66
PRK08633	1146	2-acyl-glycerophospho-ethanolamine acyltransferase	97.63
PRK15462	493	dipeptide/tripeptide permease D; Provisional	97.63
KOG0255	521	consensus Synaptic vesicle transporter SVOP and re	97.61
PRK11273	452	glpT sn-glycerol-3-phosphate transporter; Provisio	97.6
TIGR00879	481	SP MFS transporter, sugar porter (SP) family. This	97.57
PRK15403	413	multidrug efflux system protein MdtM; Provisional	97.56
PRK11902	402	ampG muropeptide transporter; Reviewed	97.56
TIGR00894	465	2A0114euk Na(+)-dependent inorganic phosphate cotr	97.52
TIGR00901	356	2A0125 AmpG-related permease.	97.51
PLN00028	476	nitrate transmembrane transporter; Provisional	97.51
TIGR00899	375	2A0120 sugar efflux transporter. This family of pr	97.48
PRK15011	393	sugar efflux transporter B; Provisional	97.4
PRK10077	479	xylE D-xylose transporter XylE; Provisional	97.4
TIGR00806	511	rfc RFC reduced folate carrier. Proteins of the RF	97.36
TIGR00887	502	2A0109 phosphate:H+ symporter. This model represen	97.29
PRK06814	1140	acylglycerophosphoethanolamine acyltransferase; Pr	97.28
KOG4332	454	consensus Predicted sugar transporter [Carbohydrat	97.26
PRK15034	462	nitrate/nitrite transport protein NarU; Provisiona	97.24
PRK09584	500	tppB putative tripeptide transporter permease; Rev	97.23
TIGR00898	505	2A0119 cation transport protein.	97.22
TIGR00889	418	2A0110 nucleoside transporter. This family of prot	97.19
KOG0569	485	consensus Permease of the major facilitator superf	97.14
PRK10207	489	dipeptide/tripeptide permease B; Provisional	97.11
COG3104	498	PTR2 Dipeptide/tripeptide permease [Amino acid tra	97.11
TIGR00882	396	2A0105 oligosaccharide:H+ symporter.	97.06
PRK11128	382	putative 3-phenylpropionic acid transporter; Provi	97.06
TIGR00892	455	2A0113 monocarboxylate transporter 1.	96.97
PRK11010	491	ampG muropeptide transporter; Validated	96.92
PTZ00207	591	hypothetical protein; Provisional	96.9
PRK10406	432	alpha-ketoglutarate transporter; Provisional	96.79
TIGR00792	437	gph sugar (Glycoside-Pentoside-Hexuronide) transpo	96.79
COG2814	394	AraJ Arabinose efflux permease [Carbohydrate trans	96.64
TIGR01301	477	GPH_sucrose GPH family sucrose/H+ symporter. This	96.64
KOG0254	513	consensus Predicted transporter (major facilitator	96.57
PF00083	451	Sugar_tr: Sugar (and other) transporter; InterPro:	96.56
TIGR02718	390	sider_RhtX_FptX siderophore transporter, RhtX/FptX	96.52
COG2271	448	UhpC Sugar phosphate permease [Carbohydrate transp	96.48
PRK15075	434	citrate-proton symporter; Provisional	96.45
TIGR00805	633	oat sodium-independent organic anion transporter.	96.41
TIGR00902	382	2A0127 phenyl proprionate permease family protein.	96.4
PF06609	599	TRI12: Fungal trichothecene efflux pump (TRI12); I	96.32
PRK10429	473	melibiose:sodium symporter; Provisional	96.28
TIGR00883	394	2A0106 metabolite-proton symporter. This model rep	96.19
KOG2563	480	consensus Permease of the major facilitator superf	96.12
PRK09952	438	shikimate transporter; Provisional	96.01
KOG3626	735	consensus Organic anion transporter [Secondary met	95.91
PRK10642	490	proline/glycine betaine transporter; Provisional	95.83
PF06813	250	Nodulin-like: Nodulin-like; InterPro: IPR010658 Th	95.76
PRK09669	444	putative symporter YagG; Provisional	95.72
COG0738	422	FucP Fucose permease [Carbohydrate transport and m	95.71
PTZ00207	591	hypothetical protein; Provisional	95.6
KOG2532	466	consensus Permease of the major facilitator superf	95.52
PF12832	77	MFS_1_like: MFS_1 like family	95.47
PF03137	539	OATP: Organic Anion Transporter Polypeptide (OATP)	95.43
KOG0253	528	consensus Synaptic vesicle transporter SV2 (major	95.37
PF01306	412	LacY_symp: LacY proton/sugar symporter; InterPro:	95.26
PF01770	412	Folate_carrier: Reduced folate carrier; InterPro:	95.22
TIGR00769	472	AAA ADP/ATP carrier protein family. These proteins	95.16
COG2223	417	NarK Nitrate/nitrite transporter [Inorganic ion tr	94.9
PF06779	85	DUF1228: Protein of unknown function (DUF1228); In	94.7
COG2807	395	CynX Cyanate permease [Inorganic ion transport and	94.57
PF11700	477	ATG22: Vacuole effluxer Atg22 like; InterPro: IPR0	94.48
KOG1330	493	consensus Sugar transporter/spinster transmembrane	94.29
KOG0255	521	consensus Synaptic vesicle transporter SVOP and re	93.94
PRK11462	460	putative transporter; Provisional	93.87
PRK09848	448	glucuronide transporter; Provisional	93.85
KOG4686	459	consensus Predicted sugar transporter [Carbohydrat	93.18
PF03825	400	Nuc_H_symport: Nucleoside H+ symporter	93.01
KOG2325	488	consensus Predicted transporter/transmembrane prot	92.96
PF13347	428	MFS_2: MFS/sugar transport protein	92.55
KOG3762	618	consensus Predicted transporter [General function	92.54
COG2211	467	MelB Na+/melibiose symporter and related transport	92.54
PF03209	403	PUCC: PUCC protein; InterPro: IPR004896 This prote	90.51
PF00083	451	Sugar_tr: Sugar (and other) transporter; InterPro:	90.27
PF05631	354	DUF791: Protein of unknown function (DUF791); Inte	88.92
KOG2504	509	consensus Monocarboxylate transporter [Carbohydrat	88.43
TIGR00788	468	fbt folate/biopterin transporter. The only functio	88.29
KOG3764	464	consensus Vesicular amine transporter [Intracellul	86.9
COG2270	438	Permeases of the major facilitator superfamily [Ge	86.82
TIGR01272	310	gluP glucose/galactose transporter. Disruption of	86.02
KOG0253	528	consensus Synaptic vesicle transporter SV2 (major	83.81
PF05978	156	UNC-93: Ion channel regulatory protein UNC-93; Int	81.9
KOG3574	510	consensus Acetyl-CoA transporter [Inorganic ion tr	80.58

>PF06963 FPN1: Ferroportin1 (FPN1); InterPro: IPR009716 This entry represents the solute carrier family 40 member 1 family of proteins, also known as Ferroportin 1

Probab=100.00  E-value=3.3e-74  Score=581.77  Aligned_cols=380  Identities=35%  Similarity=0.520  Sum_probs=328.3

Q ss_pred             chhhHHHHHHhhhhhcchhccCCcHHHHHHHHHHHHHHHHHHHHHHHHHhcccccc--ccchhHHHHHHHHHHHHHHHHH
Q 015168            2 GFFSKLILIVGGPLVGKLMDHSPRIPAYICLNTVQAAAQLLSAAMIIHAHTVIPTS--SSMLLHPWFFVLVLAGAVERLT   79 (412)
Q Consensus         2 g~~~~lp~ll~g~~~G~~vDr~~R~~v~~~~~~~q~~~v~~s~~~~~~~~~~~~~~--~~~~~~~l~~~~~~~g~~~~l~   79 (412)
                      ||++++..++|||.+|+|+||.||+|+++.+.++||.++++||..+..++...+..  +++....+++++++++++++++
T Consensus        44 gl~~~~~~~~f~~~vG~~iD~~~Rl~~~~~~l~~Qn~sv~~s~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~~~~i~~La  123 (432)
T PF06963_consen   44 GLVRSLSAILFGPWVGRWIDRSPRLKVIRTSLVVQNLSVAASCALFLLLLSYPSSSSQSSWLFIALFALLILLGAIERLA  123 (432)
T ss_pred             HHHHHHHHHHhhHHHHHHHhCCcchhhHHHHHHHHHHHHHHHHHHHHHHHhCCccccccchHHHHHHHHHHHHHHHHHHH
Confidence            79999999999999999999999999999999999999999997655555433221  2345567899999999999999


Q ss_pred             hhhhhhhhcccceeeecCCCchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhcChhHHHHHHHHHHHHHHHHHHHHHHH
Q 015168           80 GVALGVAVERDWAVLLAGINRPIALAKANAVLNRIDLLCEIAGASLFGILLSKYEPVTCLKFAAGLIMWSLPVMIILTWF  159 (412)
Q Consensus        80 ~~a~~~ai~RDwv~~l~~~~~~~~L~~~Ns~l~~id~v~~llgP~lgG~L~~~~~~~~~~~~~~~~~~~s~~~~~~~l~~  159 (412)
                      ++++++++||||+++++++|+ ++|+++|++|||||++||++||++.|+++++.|++.++++++++|++|+++|+.++..
T Consensus       124 s~~~~iavERDWVvvi~~~~~-~~La~~NA~mRRIDL~ckllaPl~vG~l~t~~s~~~~~~~i~~~N~~S~~vEy~~l~~  202 (432)
T PF06963_consen  124 SIANTIAVERDWVVVIAGGDP-GALARMNATMRRIDLFCKLLAPLFVGLLMTFASPVIAAIFIAGWNLASVFVEYFLLAR  202 (432)
T ss_pred             HhhhhheeccchhhhhcCCCh-hhHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            999999999999999997654 5999999999999999999999999999999999999999999999999999998888


Q ss_pred             hhhccccccccccccccccCCCCC------CCCCCchhhhHHhHHHHHHhHHHHhcCCcchHHHHHHHHHHHhhhccchH
Q 015168          160 TNKISSGVLDRAKCSQSCCRTSNE------GPVPDADNIVDVGIEAIKLGWKEYMQQPVLPASLAYVLLCLNVVLTPGSL  233 (412)
Q Consensus       160 ~~~~~~~~l~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~g~~~~~~~~v~~~~~~~a~l~~t~v~~~~~~  233 (412)
                      +|+.-+ .++.+++.+++++++++      ++.++..+..++..+.+++||+.|+|||+|+++++++++|+| +++||++
T Consensus       203 VY~~~P-~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~Y~~q~vflas~alalLY~T-VLsf~~l  280 (432)
T PF06963_consen  203 VYNSVP-ALAVKKRSSESESSSDEESSSESSSDPSILKRLWNPLRTIIRGWRTYFRQPVFLASFALALLYFT-VLSFGGL  280 (432)
T ss_pred             HHHhCh-HhcCCCCCccccccccccccccccchhhHHHHHHHHHHHHhccHHHHHhCHHHHHHHHHHHHHHH-HhcCcHH
Confidence            754322 33322222111111110      111222333455677888999999999999999999999999 6999999


Q ss_pred             HHHHHHhcCCCCchhHHHhhHHHHHHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHHhc-CCCcCcchHHHHH
Q 015168          234 MTAFLTQRGLNPSIIGGFSGLCASMGVAATFLSAYLVRRLGILKAGAAGLIFQASLLAMAVAVYWS-GSLSQQNPLLFFL  312 (412)
Q Consensus       234 ~~~y~~~~gls~~~~G~~~~~~avggllGt~l~~~l~~R~g~~r~~~~~~~~~~~~l~~~v~~~~~-g~~~~~~~~~l~~  312 (412)
                      ++.|++++|+|+..+|.+|+.+++.|++||+++|++.||+|..|+|.|++++|..|+.+++..+|. +++.+..+..+++
T Consensus       281 mt~yl~~~G~s~~~igi~R~~gav~Gl~gT~~~p~l~~riGlvr~G~~~l~~q~~~L~~~v~~~~~~~~~~~~~s~~~l~  360 (432)
T PF06963_consen  281 MTAYLKSQGYSPSVIGIFRGLGAVFGLLGTWVYPWLMKRIGLVRAGLWSLWWQWVCLALCVVSFWAPGSPFSSISAYLLL  360 (432)
T ss_pred             HHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchhhHHHHHHHHHHHHHHHHHHHhcCCCCchhhHHHHHH
Confidence            999999999999999999999999999999999999999999999999999999999999987775 4321245677788


Q ss_pred             HHHHHhhhhhhhhhhhhhHHhhccCCcccchhHHHHHHHHHHHHHHHHHHHHHhccCCCchhHHHHHHHHHH
Q 015168          313 CLIVLSRLGHMSYDIVGAQILQTGIPSSKANLIGTTEISVASLVESVMLGVAIIANDVSHFGFLATLSLLSV  384 (412)
Q Consensus       313 ~g~~~sr~GLw~~dl~~~~l~Q~~vp~~~~G~v~g~~~sl~~~~~ll~~~~~~~~~~~~~f~~l~~~s~~~v  384 (412)
                      .|+++||+|||+||++++|++||.|||++||++||+|+|+|+.+|++++++++++|+|++|++++++|+++|
T Consensus       361 ~gi~~SR~GLW~fDL~~~qi~Qe~V~~~~Rg~v~gvq~sl~~lf~ll~~~~~ii~~~P~~F~~lv~iS~~~V  432 (432)
T PF06963_consen  361 GGIALSRIGLWSFDLAVTQIMQENVPESERGAVSGVQNSLQSLFELLSFVLTIIFPRPSQFGWLVLISVAAV  432 (432)
T ss_pred             HHHHHHHHHHHhhhHHHHHhhcccCCHHHhhHHHHHHHHHHHHHHHHHHHHHhccCChHhcChHHHhhheeC
Confidence            899999999999999999999999999999999999999999999999999999999999999999998764

It is thought to be involved in iron export from duodenal epithelial cells and also in transfer of iron between maternal and fetal circulation. This family of proteins is known to be localised in the basolateral membrane of polarized epithelial cells [].; GO: 0005381 iron ion transmembrane transporter activity, 0034755 iron ion transmembrane transport, 0016021 integral to membrane

>KOG2601 consensus Iron transporter [Inorganic ion transport and metabolism]

Probab=100.00  E-value=3.8e-56  Score=426.97  Aligned_cols=390  Identities=22%  Similarity=0.295  Sum_probs=325.3

Q ss_pred             chhhHHHHHHhhhhhcchhccCCcHHHHHHHHHHHHHHHHHHHHHHHHHhcccc--ccccchhHHHHHHHHHHHHHHHHH
Q 015168            2 GFFSKLILIVGGPLVGKLMDHSPRIPAYICLNTVQAAAQLLSAAMIIHAHTVIP--TSSSMLLHPWFFVLVLAGAVERLT   79 (412)
Q Consensus         2 g~~~~lp~ll~g~~~G~~vDr~~R~~v~~~~~~~q~~~v~~s~~~~~~~~~~~~--~~~~~~~~~l~~~~~~~g~~~~l~   79 (412)
                      |++.....+++|+.+|.|+|+.+|+|+++...+.||+++.++.+.+...+.+.+  ..++.....+++.+.+.+++.+++
T Consensus        69 glvesgs~lvlg~ivGq~vDg~sr~Kvi~~~L~lqNlSv~vagglvi~~l~~~~~~~~t~pv~t~~lvLa~~i~aI~~La  148 (503)
T KOG2601|consen   69 GLVESGSQLVLGPIVGQWVDGMSRVKVIQTWLLLQNLSVIVAGGLVITLLVHKDLKSATSPVFTVCLVLANLIAAIAVLA  148 (503)
T ss_pred             HHHHHhHHHhhHHHHHHHhcchhHHHHHHHHHhhccHHHHHHHHHHhhheeecchhcccccHHHHHHHHHHHHHHHHHHH
Confidence            567788999999999999999999999999999999999988765555544331  111112234566677899999999


Q ss_pred             hhhhhhhhcccceeeecCCCchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhcChhHHHHHHHHHHHHHHHHHHHHHHH
Q 015168           80 GVALGVAVERDWAVLLAGINRPIALAKANAVLNRIDLLCEIAGASLFGILLSKYEPVTCLKFAAGLIMWSLPVMIILTWF  159 (412)
Q Consensus        80 ~~a~~~ai~RDwv~~l~~~~~~~~L~~~Ns~l~~id~v~~llgP~lgG~L~~~~~~~~~~~~~~~~~~~s~~~~~~~l~~  159 (412)
                      +.+.++.++|||++++.++++++.++++|+.+|++|+.+|+++|+..|+++++.+.+....+.++|+.+|+++++.+++.
T Consensus       149 s~A~~i~i~RDWvvV~s~g~s~s~lt~mnatir~iDq~tn~Lapv~tg~Iitfvsl~~~~g~f~~w~~vsm~~ey~ll~~  228 (503)
T KOG2601|consen  149 SLAGTILIERDWVVVMSEGESPSVLTNMNATIRGIDQSTNLLAPVITGLIITFVSLRASAGTFAAWALVSMWVEYWLLIS  228 (503)
T ss_pred             HhhheEEecccEEEEecCCCCHHHHhhcchhhhhhhhhhhchhhhhhcccceeechhhhhhhhHHHHHHHHHHHHHHHHH
Confidence            99999999999999998777677899999999999999999999999999999999998888899999999999988877


Q ss_pred             hh-hccccccccccccc-----------cccCCCCC----------CCCCCchh----hhHHhHHHHHHhHHHHhcCCcc
Q 015168          160 TN-KISSGVLDRAKCSQ-----------SCCRTSNE----------GPVPDADN----IVDVGIEAIKLGWKEYMQQPVL  213 (412)
Q Consensus       160 ~~-~~~~~~l~~~~~~~-----------~~~~~~~~----------~~~~~~~~----~~~~~~~~~~~g~~~~~~~~v~  213 (412)
                      +| ..|  .++..+.++           ..|.++-+          ...++...    .-+...+.-+.+|+.|++||++
T Consensus       229 vy~g~p--alavs~~~k~~rs~~~q~~~~~~~~s~~v~~~~s~~~~~~~~~~~~~~~~l~~~~~~sF~~~w~~y~nq~vv  306 (503)
T KOG2601|consen  229 VYIGVP--ALAVSKGRKNLRSKESQVELRDCQSSFPVAGTHSEGFMTNLASRYGILVILPRFSISSFRSAWRVYFNQEVV  306 (503)
T ss_pred             HHhCCc--HHhhhcchhhhhhhhheeeeecCCcccccccccceeeeccccccCccccccchhhhHHHHhHHHhhccCeee
Confidence            64 333  221111110           00100000          00000000    0012345667899999999999


Q ss_pred             hHHHHHHHHHHHhhhccchHHHHHHHhcCCCCchhHHHhhHHHHHHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHH
Q 015168          214 PASLAYVLLCLNVVLTPGSLMTAFLTQRGLNPSIIGGFSGLCASMGVAATFLSAYLVRRLGILKAGAAGLIFQASLLAMA  293 (412)
Q Consensus       214 ~~~~~~a~l~~t~v~~~~~~~~~y~~~~gls~~~~G~~~~~~avggllGt~l~~~l~~R~g~~r~~~~~~~~~~~~l~~~  293 (412)
                      .++.+.+++|++ +++|+.+++.|+...|.|-...|+.++..+..|+.+++.++...+|.++.|++.|..+.|..     
T Consensus       307 l~g~slallf~t-vl~f~~L~t~~~~~~G~p~~i~gi~~g~Sa~tg~~~tv~~~~~~~~~nl~rtg~ws~~sq~s-----  380 (503)
T KOG2601|consen  307 LPGVSLALLFFT-VLGFGVLMTATLFWPGSPMYIIGIGRGISAGTGLAATVHYPLMQSRTNLLRTGLWSFWSQDS-----  380 (503)
T ss_pred             ehhhHHHHHHHH-HHhhheeeeeeeecCCCCceehhhccCcchhhhhhhhhhcccccCccCCCcceehhhccccc-----
Confidence            999999999999 69999999999999999999999999999999999999999999999999999998776543     


Q ss_pred             HHHHhcCCCcCcchHHHHHHHHHHhhhhhhhhhhhhhHHhhccCCcccchhHHHHHHHHHHHHHHHHHHHHHhccCCCch
Q 015168          294 VAVYWSGSLSQQNPLLFFLCLIVLSRLGHMSYDIVGAQILQTGIPSSKANLIGTTEISVASLVESVMLGVAIIANDVSHF  373 (412)
Q Consensus       294 v~~~~~g~~~~~~~~~l~~~g~~~sr~GLw~~dl~~~~l~Q~~vp~~~~G~v~g~~~sl~~~~~ll~~~~~~~~~~~~~f  373 (412)
                             .  +..+..+++.|++.+|+|||+||++++|++|+.+||++|+.++|+|+|+|+.++++++++++++|+|.+|
T Consensus       381 -------v--~~isv~ll~agVaaaR~GLW~fDlAVtqimQe~VpEseR~vv~gvqnsL~~~ldll~~ilvIi~pnp~~F  451 (503)
T KOG2601|consen  381 -------V--SKISVYLLFAGVAAARLGLWMFDLAVTQIMQETVPESERCVVFGVQNSLNSALDLLKDILVIIVPNPKDF  451 (503)
T ss_pred             -------c--hhHHHHHHHHHHHHHHhhHHhccHHHHHHHHHhcchhhhhhhHhHHHHHHHHHHHHHHhEEEEecCccce
Confidence                   1  2456777888999999999999999999999999999999999999999999999999999999999999


Q ss_pred             hHHHHHHHHHHHHHHHHHHHHhcCCCccCCcccccCCC
Q 015168          374 GFLATLSLLSVVGAAWMFCHWLLNPTDEQRSLFSFDPQ  411 (412)
Q Consensus       374 ~~l~~~s~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~  411 (412)
                      +++.++|+++|.+|+.+|.+|..|.|   .|.+|+|++
T Consensus       452 ~iltliS~~fVs~g~m~y~~~l~q~~---~~~~hl~~~  486 (503)
T KOG2601|consen  452 GILTLISFSFVSLGHMFYTFYLAQIR---SHNFHLEKI  486 (503)
T ss_pred             eeeeeehhhHhhhhhhhhhhhhhhcc---ccccchhcC
Confidence            99999999999999999999988877   789999875

>PF05977 MFS_3: Transmembrane secretion effector; InterPro: IPR010290 This family consists of the enterobactin exporter EntS proteins and putative permeases all belonging to the major facilitator superfamily

Probab=100.00  E-value=1.5e-30  Score=271.38  Aligned_cols=346  Identities=16%  Similarity=0.083  Sum_probs=246.5

Q ss_pred             hhhHHHHHHhhhhhcchhccCCcHHHHHHHHHHHHHHHHHHHHHHHHHhccccccccchhHHHHHHHHHHHHHHHHHhhh
Q 015168            3 FFSKLILIVGGPLVGKLMDHSPRIPAYICLNTVQAAAQLLSAAMIIHAHTVIPTSSSMLLHPWFFVLVLAGAVERLTGVA   82 (412)
Q Consensus         3 ~~~~lp~ll~g~~~G~~vDr~~R~~v~~~~~~~q~~~v~~s~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~l~~~a   82 (412)
                      .+.++|.+++++++|.++||+||||+|+.+|+.+.+..++.+  ++...+..      ..+.++...++.|+.+.+.+.+
T Consensus        52 ~a~~LP~~Llsl~aG~laDr~drrrili~~~~~~~~~~~~L~--~l~~~~~~------~~~~Ll~~~fl~g~~~a~~~PA  123 (524)
T PF05977_consen   52 AASTLPILLLSLFAGALADRFDRRRILILSQLLRALVALLLA--VLAFFGLL------SPWLLLILTFLLGIGSAFFNPA  123 (524)
T ss_pred             HHHHHHHHHHHHHHHHHhhcccchHHHHHHHHHHHHHHHHHH--HHHHhCcC------CHHHHHHHHHHHHHHHHHHHHH
Confidence            577999999999999999999999999999999876544322  23333322      1245677788999999999988


Q ss_pred             hhhhhcccceeeecCCCchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhcChhHHHHHHHHHHHHHHHHHHHHHHHhhh
Q 015168           83 LGVAVERDWAVLLAGINRPIALAKANAVLNRIDLLCEIAGASLFGILLSKYEPVTCLKFAAGLIMWSLPVMIILTWFTNK  162 (412)
Q Consensus        83 ~~~ai~RDwv~~l~~~~~~~~L~~~Ns~l~~id~v~~llgP~lgG~L~~~~~~~~~~~~~~~~~~~s~~~~~~~l~~~~~  162 (412)
                      .+..++     .+++++   ++.++|+.......++.++||.+||.+++.+|...+|++    |++++......+..+  
T Consensus       124 ~~A~ip-----~lV~~~---~L~~A~al~s~~~niar~iGPalgG~Lva~~G~~~~f~i----nalsfl~~i~~l~~~--  189 (524)
T PF05977_consen  124 WQAIIP-----ELVPKE---DLPAANALNSISFNIARIIGPALGGILVAFFGAAAAFLI----NALSFLISILALLRW--  189 (524)
T ss_pred             HHHHHH-----HhccHh---hHHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHH----HHHHHHHHHHHHHHc--
Confidence            887554     388864   899999999999999999999999999999998887765    444544333222222  


Q ss_pred             ccccccccccccccccCCCCCCCCCCchhhhHHhHHHHHHhHHHHhcCCcchHHHHHHHHHHHhhhccchHHHHHHH-hc
Q 015168          163 ISSGVLDRAKCSQSCCRTSNEGPVPDADNIVDVGIEAIKLGWKEYMQQPVLPASLAYVLLCLNVVLTPGSLMTAFLT-QR  241 (412)
Q Consensus       163 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~v~~~~~~~a~l~~t~v~~~~~~~~~y~~-~~  241 (412)
                       +++.  ++++            .+  +   ++..+++++|+|++.++|.++..+..+.++......+..+++.|.+ ++
T Consensus       190 -~~~~--~~~~------------~~--~---e~~~~~l~~G~ryv~~~~~l~~~l~~~~~~~l~~~a~~aLlPl~a~~~l  249 (524)
T PF05977_consen  190 -KPPP--PPSS------------LP--R---ERFFSALREGLRYVRSSPPLRSVLLRSFLFNLFASAVWALLPLFARDVL  249 (524)
T ss_pred             -cccc--cccc------------cc--h---hhhhhhHHHHHHHHhcchHHHHHHHHHHHHHHhhhHHHHhhhHHHHHHh
Confidence             1100  0000            00  1   2457889999999999999998777666662212344556777887 48


Q ss_pred             CCCCchhHHHhhHHHHHHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHHhcCCCcCcchHHHHHHHHHHhhhh
Q 015168          242 GLNPSIIGGFSGLCASMGVAATFLSAYLVRRLGILKAGAAGLIFQASLLAMAVAVYWSGSLSQQNPLLFFLCLIVLSRLG  321 (412)
Q Consensus       242 gls~~~~G~~~~~~avggllGt~l~~~l~~R~g~~r~~~~~~~~~~~~l~~~v~~~~~g~~~~~~~~~l~~~g~~~sr~G  321 (412)
                      |.++..||++.++.++|+++|+++.+++.+|++..+....+......+...  ..+.+ +      ..+....+++.+.+
T Consensus       250 ~~~a~~yGll~a~~gvGai~Gal~~~~l~~~~~~~~lv~~~~~~~a~~~~~--lal~~-~------~~~~~~~l~l~G~~  320 (524)
T PF05977_consen  250 GGGASGYGLLLAAFGVGAILGALLLPRLRRRLSSRRLVLLASLLFALALLL--LALSP-S------FWLALIALFLAGAA  320 (524)
T ss_pred             CCcHHHHHHHHHHHHHHHHHHHHHHHHhhcccCcchhhHHHHHHHHHHHHH--Hhcch-H------HHHHHHHHHHHHHH
Confidence            999999999999999999999999999999999988776655432221111  11111 1      11111223333444


Q ss_pred             hhhhhhhhhHHhhccCCcccchhHHHHHHHHHHH-HHHHHHHHHHhccCCCchhHHHHHHHHHHHHHHHHHHHHhcCCC
Q 015168          322 HMSYDIVGAQILQTGIPSSKANLIGTTEISVASL-VESVMLGVAIIANDVSHFGFLATLSLLSVVGAAWMFCHWLLNPT  399 (412)
Q Consensus       322 Lw~~dl~~~~l~Q~~vp~~~~G~v~g~~~sl~~~-~~ll~~~~~~~~~~~~~f~~l~~~s~~~v~~~~~~~~~~~~~~~  399 (412)
                      .-..+...+..+|+.+|++.|||++++++++.++ +.+...+.+.+...-+.-..+.+.+++.+.++.+.+....++.+
T Consensus       321 ~~~~~~~~~t~~Q~~~P~~~~GRv~si~~~~~~g~~~lGsll~G~la~~~g~~~al~~a~~~lll~~~~~~~~~l~~~~  399 (524)
T PF05977_consen  321 WIIANSSLNTLVQLSVPDWVRGRVFSIYQMVFFGGMPLGSLLWGFLADHFGVRTALLIAGAALLLSALIALRFPLRQGE  399 (524)
T ss_pred             HHHHHHHHHHHHHHhCCHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHhcCcccc
Confidence            4457778889999999999999999999999988 66667777777766666666666665555666666666655543

EntS exports the siderophore enterobactin out of the cell. The genetic locus entS was changed from ybdA so as to reflect its relevant biological function [].

>PRK11195 lysophospholipid transporter LplT; Provisional

Probab=99.90  E-value=5.4e-21  Score=193.35  Aligned_cols=341  Identities=18%  Similarity=0.083  Sum_probs=208.0

Q ss_pred             hhHHHHHHhhhhhcchhccCCcHHHHHHHHHHHHHHHHHHHHHHHHHhccccccccchhHHHHHHHHHHHHHHHHHhhhh
Q 015168            4 FSKLILIVGGPLVGKLMDHSPRIPAYICLNTVQAAAQLLSAAMIIHAHTVIPTSSSMLLHPWFFVLVLAGAVERLTGVAL   83 (412)
Q Consensus         4 ~~~lp~ll~g~~~G~~vDr~~R~~v~~~~~~~q~~~v~~s~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~l~~~a~   83 (412)
                      +..+|..+++++.|.+.||++|||++..+++.+.+...+ +     .+..       .  . ++.-++.|..+.....+.
T Consensus        46 ~~~l~~~l~~~~~G~laDr~grr~vl~~~~~~~~~~~~~-~-----~~~~-------~--~-~~~r~l~G~~~a~~~pa~  109 (393)
T PRK11195         46 FFVLAYIVLAPFVGAFADSFPKGRVMFIANGIKLLGCLL-M-----LFGI-------H--P-LLAYGLVGIGAAAYSPAK  109 (393)
T ss_pred             HHHHHHHHHHhhhhHhhhccCCchhhHHHHHHHHHHHHH-H-----HHHH-------H--H-HHHHHHHHHHHHHHHHHH
Confidence            456899999999999999999999999999887554221 1     1111       0  1 222234566565555444


Q ss_pred             hhhhcccceeeecCCCchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhcChhHHHHHHHHHHHHHHHHHHHHHHHhhhc
Q 015168           84 GVAVERDWAVLLAGINRPIALAKANAVLNRIDLLCEIAGASLFGILLSKYEPVTCLKFAAGLIMWSLPVMIILTWFTNKI  163 (412)
Q Consensus        84 ~~ai~RDwv~~l~~~~~~~~L~~~Ns~l~~id~v~~llgP~lgG~L~~~~~~~~~~~~~~~~~~~s~~~~~~~l~~~~~~  163 (412)
                      . ++.+|    +++++   ++.++|+.+....+.+.++||.+||.+.+.. |+..+.+.....+.+.    +   ....+
T Consensus       110 ~-a~i~~----~~~~~---~~~~a~~~~~~~~~~~~~~Gp~lgG~l~~~~-~~~~~~i~~~~~~~~~----~---~~~~l  173 (393)
T PRK11195        110 Y-GILTE----LLPGE---KLVKANGWMEGSTIAAILLGTVLGGALADPH-AEAALAVCALIYLLAA----L---FNLFI  173 (393)
T ss_pred             H-HHHHH----HcCHH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHH----H---HHhcC
Confidence            3 33345    67753   8999999999999999999999999999854 5544433222222111    1   11234


Q ss_pred             cccccccccccccccCCCCCCCCCCchhhhHHhHHHHHHhHHHHhcCCcchHHHHHHHHHHHhhhccchHHHHHHH-hcC
Q 015168          164 SSGVLDRAKCSQSCCRTSNEGPVPDADNIVDVGIEAIKLGWKEYMQQPVLPASLAYVLLCLNVVLTPGSLMTAFLT-QRG  242 (412)
Q Consensus       164 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~v~~~~~~~a~l~~t~v~~~~~~~~~y~~-~~g  242 (412)
                      ||++.  +++.          .+.+ .   ....++..++++.+++||.++..+....++.............|.+ .+|
T Consensus       174 ~~~~~--~~~~----------~~~~-~---~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg  237 (393)
T PRK11195        174 PRLGA--RRPG----------QSWN-P---IALLRDFFHACRVLWRDKLGRFSLAGTTLFWGAGATLRFLVLAWAPVALG  237 (393)
T ss_pred             CCCcc--cccc----------cCCC-H---HHHHHHHHHHHHHHHhCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC
Confidence            44111  1110          0001 0   1235566788999999999887655433331101222233445665 489


Q ss_pred             CCCchhHHHhhHHHHHHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHHhcCCCcCcchHHHHHHHHHHhhhhh
Q 015168          243 LNPSIIGGFSGLCASMGVAATFLSAYLVRRLGILKAGAAGLIFQASLLAMAVAVYWSGSLSQQNPLLFFLCLIVLSRLGH  322 (412)
Q Consensus       243 ls~~~~G~~~~~~avggllGt~l~~~l~~R~g~~r~~~~~~~~~~~~l~~~v~~~~~g~~~~~~~~~l~~~g~~~sr~GL  322 (412)
                      .|+.++|.+.+..++++++|+++.+++.+|.+.++....+...   ......... ..+      ........++.+++.
T Consensus       238 ~s~~~~G~~~~~~~~g~i~g~~~~~~l~~~~~~~~~~~~g~~~---~~~~~~~~~-~~~------~~~~~~~~~~~G~~~  307 (393)
T PRK11195        238 ITLNQPAYLQAVVAIGIAVGAGAAARLVTLETVLRVLPAGILM---GLVVLLMAL-QHS------LLPAYPLLILIGALG  307 (393)
T ss_pred             CChhHHHHHHHHHHHHHHHHHHHHHHHhcCCcccchHHHHHHH---HHHHHHHHH-HhH------HHHHHHHHHHHHHhh
Confidence            9999999999999999999999999999998887776655322   111111111 111      111111222223344


Q ss_pred             hhhhhhhhHHhhccCCccc-chhHHHHHHHHHHHHHHHHHHHHHhccCCCchhHHHHHHHHHHHHHHHHHHHHhcCCCcc
Q 015168          323 MSYDIVGAQILQTGIPSSK-ANLIGTTEISVASLVESVMLGVAIIANDVSHFGFLATLSLLSVVGAAWMFCHWLLNPTDE  401 (412)
Q Consensus       323 w~~dl~~~~l~Q~~vp~~~-~G~v~g~~~sl~~~~~ll~~~~~~~~~~~~~f~~l~~~s~~~v~~~~~~~~~~~~~~~~~  401 (412)
                      ..++...+...|+..|++. +|++.|+.+..++....+...+......-+-.+..++...+. ....++-..| |.-|+.
T Consensus       308 g~~~~~~~~~~q~~~~~~~~~g~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~-~~~~~~  385 (393)
T PRK11195        308 GFFVVPMNALLQHRGHVLVGAGHSIAVQNFNENLAMLLMLGLYSLLVKLGVPVVAVIVGFGL-LVALAMALLW-RWHRRN  385 (393)
T ss_pred             hhhhhhHHHHHHhhCcccccchhHHHHHhHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHH-HHHHHHHHHH-HHHHhc
Confidence            4577778888999877765 799999999999987666666655554444444444444443 3444444455 322444


Q ss_pred             CCc
Q 015168          402 QRS  404 (412)
Q Consensus       402 ~~~  404 (412)
                      ||+
T Consensus       386 ~~~  388 (393)
T PRK11195        386 QRQ  388 (393)
T ss_pred             ccc
Confidence            664

>PRK06814 acylglycerophosphoethanolamine acyltransferase; Provisional

Probab=99.86  E-value=4.4e-19  Score=201.86  Aligned_cols=319  Identities=13%  Similarity=-0.008  Sum_probs=203.2

Q ss_pred             hhHHHHHHhhhhhcchhccCCcHHHHHHHHHHHHHHHHHHHHHHHHHhccccccccchhHHHHHHHHHHHHHHHHHhhhh
Q 015168            4 FSKLILIVGGPLVGKLMDHSPRIPAYICLNTVQAAAQLLSAAMIIHAHTVIPTSSSMLLHPWFFVLVLAGAVERLTGVAL   83 (412)
Q Consensus         4 ~~~lp~ll~g~~~G~~vDr~~R~~v~~~~~~~q~~~v~~s~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~l~~~a~   83 (412)
                      +..+|++++++++|.++||++||++|+..+....+..+...   . .+...      ..+.+++..++.|..+..+..+.
T Consensus        60 ~~~l~~~l~~~~~G~laDr~~rk~~~~~~~~~~~~~~~~~~---~-~~~~~------s~~~l~~~~~l~gi~~a~~~p~~  129 (1140)
T PRK06814         60 VFILPFFIFSALAGQLADKYDKAKLAKILKFAEIGIAALAI---Y-GFHLN------SVPLLFAALFLMGIHSALFGPIK  129 (1140)
T ss_pred             HHHHHHHHHhhhHHhhhhhccHHHHHHHHHHHHHHHHHHHH---H-HHHHh------hHHHHHHHHHHHHHHHHhhchHH
Confidence            56789999999999999999999998887766554433211   1 11111      12356666677788777776554


Q ss_pred             hhhhcccceeeecCCCchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhcChhHHHHHHHHHHHHHHHHHHHHHHHhhhc
Q 015168           84 GVAVERDWAVLLAGINRPIALAKANAVLNRIDLLCEIAGASLFGILLSKYEPVTCLKFAAGLIMWSLPVMIILTWFTNKI  163 (412)
Q Consensus        84 ~~ai~RDwv~~l~~~~~~~~L~~~Ns~l~~id~v~~llgP~lgG~L~~~~~~~~~~~~~~~~~~~s~~~~~~~l~~~~~~  163 (412)
                      . ++.+|    +++++   ++.++|+.++....++.++||.++|.++...+|+..+++.....+..+.       ...++
T Consensus       130 ~-a~l~~----~~~~~---~~~~a~~~~~~~~~ig~~igp~l~g~l~~~~~~~~~~~~~~~~~~~~~~-------~~~~~  194 (1140)
T PRK06814        130 Y-SILPD----HLNKD---ELLGANALVEAGTFIAILLGTIIGGLATISGNFVILVALLMGIAVLGWL-------ASLFI  194 (1140)
T ss_pred             H-HhhHh----hcCcc---ccchhhHHHHHHHHHHHHHHHHHHHHHHhccccHHHHHHHHHHHHHHHH-------HHhhC
Confidence            4 44456    56654   7999999999999999999999999999999999876322222222111       11233


Q ss_pred             cccccccccccccccCCCCCCCCCCchhhhHHhHHHHHHhHHHHhcCCcchHHHHH-HHHHHHhhhccchHHHHHHHh-c
Q 015168          164 SSGVLDRAKCSQSCCRTSNEGPVPDADNIVDVGIEAIKLGWKEYMQQPVLPASLAY-VLLCLNVVLTPGSLMTAFLTQ-R  241 (412)
Q Consensus       164 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~v~~~~~~~-a~l~~t~v~~~~~~~~~y~~~-~  241 (412)
                      ++...+ +++.           ..+     ....++..++++..+++|.++..... ...++. ...+....+.|+++ +
T Consensus       195 ~~~~~~-~~~~-----------~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~p~~~~~~~  256 (1140)
T PRK06814        195 PKTGNA-APDL-----------KID-----RNIIRSTITLLKYAKADKRIWLAILGISWFWLV-GAVVLSQLPLLAKETL  256 (1140)
T ss_pred             CCCCCC-CCCC-----------eec-----cchHHHHHHHHHHHhcCchHHHHHHHHHHHHHH-HHHHHHHhHHHHHHHc
Confidence            331110 0000           000     12245667899999999998885443 333332 23344457778875 7


Q ss_pred             CCCCchhHHHhhHHHHHHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHHh-cC-CC-cC----------cchH
Q 015168          242 GLNPSIIGGFSGLCASMGVAATFLSAYLVRRLGILKAGAAGLIFQASLLAMAVAVYW-SG-SL-SQ----------QNPL  308 (412)
Q Consensus       242 gls~~~~G~~~~~~avggllGt~l~~~l~~R~g~~r~~~~~~~~~~~~l~~~v~~~~-~g-~~-~~----------~~~~  308 (412)
                      |.++..+|++.+..++++++|+++.+++.+|.+..+...++.....++....  .+. .. .. ..          ....
T Consensus       257 g~~~~~~g~~~~~~~~g~~ig~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~l--~~~~~~~~~~~~~~~~~~~~~~~~~~  334 (1140)
T PRK06814        257 GGDENVATLFLAVFSVGVAVGSFLASKLSEGRITLLYVPIGALLMGLFGLDL--AFASSSVPAEPAQLKSILVFLSKRHG  334 (1140)
T ss_pred             CCchHHHHHHHHHHHHHHHHHHHHHHHHhCCceeeeeehHHHHHHHHHHHHH--Hhcccccccccccccchhhhhccccc
Confidence            9999999999999999999999999999988776665444433222211111  111 00 00 00          0011


Q ss_pred             HHHHHHHHHhhhhhhhhhhhhhHHhhccCCcccchhHHHHHHHHHHHHHHHHHHHHHhc
Q 015168          309 LFFLCLIVLSRLGHMSYDIVGAQILQTGIPSSKANLIGTTEISVASLVESVMLGVAIIA  367 (412)
Q Consensus       309 ~l~~~g~~~sr~GLw~~dl~~~~l~Q~~vp~~~~G~v~g~~~sl~~~~~ll~~~~~~~~  367 (412)
                      ..+..+.++.+++...+......+.|+.+|++++||+.|+.++++++...+...++...
T Consensus       335 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~G~v~g~~~~~~~~~~~ig~~~~g~l  393 (1140)
T PRK06814        335 WRILIDLFGLAAAGGLYIVPLFAALQAWANPAHRARVIAANNVLNAAFMVAGTIILALL  393 (1140)
T ss_pred             HHHHHHHHHHHHHHHHhHHHHHHHHHhhCCcccceeeeHHHHHHHHHHHHHHHHHHHHH
Confidence            11112222334455567788999999999999999999999999987544444443333

>PRK10489 enterobactin exporter EntS; Provisional

Probab=99.85  E-value=1.5e-18  Score=176.18  Aligned_cols=336  Identities=13%  Similarity=0.017  Sum_probs=205.5

Q ss_pred             hhHHHHHHhhhhhcchhccCCcHHHHHHHHHHHHHHHHHHHHHHHHHhccccccccchhHHHHHHHHHHHHHHHHHhhhh
Q 015168            4 FSKLILIVGGPLVGKLMDHSPRIPAYICLNTVQAAAQLLSAAMIIHAHTVIPTSSSMLLHPWFFVLVLAGAVERLTGVAL   83 (412)
Q Consensus         4 ~~~lp~ll~g~~~G~~vDr~~R~~v~~~~~~~q~~~v~~s~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~l~~~a~   83 (412)
                      ...++.++.+++.|.+.||++|||++..+.+...........  . .+...+     ..+.+++..++.|....+...+.
T Consensus        60 ~~~l~~~~~~~~~G~l~dr~g~~~~l~~~~~~~~~~~~~~~~--~-~~~~~~-----~~~~l~~~~~~~g~~~~~~~~~~  131 (417)
T PRK10489         60 LTGGAMFIGLMVGGVLADRYDRKKLILLARGTCGLGFIGLAL--N-AFLPEP-----SLLAIYLLGLWDGFFGSLGVTAL  131 (417)
T ss_pred             HHHHHHHHHHHhhHHHhhhcCCceEEEehHHHHHHHHHHHHH--H-HHcCCC-----cHHHHHHHHHHHHHHHHHHHHHH
Confidence            456888999999999999999999988877655443221110  0 111111     11234444445565555554444


Q ss_pred             hhhhcccceeeecCCCchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhcChhHHHHHHHHHHHHHHHHHHHHHHHhhhc
Q 015168           84 GVAVERDWAVLLAGINRPIALAKANAVLNRIDLLCEIAGASLFGILLSKYEPVTCLKFAAGLIMWSLPVMIILTWFTNKI  163 (412)
Q Consensus        84 ~~ai~RDwv~~l~~~~~~~~L~~~Ns~l~~id~v~~llgP~lgG~L~~~~~~~~~~~~~~~~~~~s~~~~~~~l~~~~~~  163 (412)
                      +.     +++..++++   +..++|+.......++..+||.++|.+....+|+..+++......+..    +   ...++
T Consensus       132 ~~-----~~~~~~~~~---~~~~~~~~~~~~~~~g~~~g~~l~g~l~~~~~~~~~~~~~~~~~~~~~----~---~~~~l  196 (417)
T PRK10489        132 LA-----ATPALVGRE---NLMQAGAITMLTVRLGSVISPALGGLLIAAGGVAWNYGLAAAGTFITL----L---PLLRL  196 (417)
T ss_pred             hh-----hhhhccCHH---HHHHHHHHHHHHHhHHHHhHHHHHHHHHHHHhhHHHHHHHHHHHHHHH----H---HHHhC
Confidence            33     233356543   788999999999999999999999999998899887755333222221    1   12244


Q ss_pred             cccccccccccccccCCCCCCCCCCchhhhHHhHHHHHHhHHHHhcCCcchHHHHHHHHHHHhhhccchHHHHHHHh-cC
Q 015168          164 SSGVLDRAKCSQSCCRTSNEGPVPDADNIVDVGIEAIKLGWKEYMQQPVLPASLAYVLLCLNVVLTPGSLMTAFLTQ-RG  242 (412)
Q Consensus       164 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~v~~~~~~~a~l~~t~v~~~~~~~~~y~~~-~g  242 (412)
                      |+...  +++.          +        ++..++..++++..++||.++..+.....+.. ...+....+.|.++ +|
T Consensus       197 ~~~~~--~~~~----------~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~p~~~~~~~g  255 (417)
T PRK10489        197 PALPP--PPQP----------R--------EHPLRSLLAGFRFLLASPVVGGIALLGGLLTM-ASAVRVLYPALADEVWQ  255 (417)
T ss_pred             CCCCC--CCcc----------c--------ccchHHHHHHHHHHHcChHHHHHHHHHHHHHH-HHhHHHhhHHHHHhccC
Confidence            43111  1100          0        01134456789999999988775554444322 23344556678876 89


Q ss_pred             CCCchhHHHhhHHHHHHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHHhcCCCcCcchHHHHHHHHHHhhhhh
Q 015168          243 LNPSIIGGFSGLCASMGVAATFLSAYLVRRLGILKAGAAGLIFQASLLAMAVAVYWSGSLSQQNPLLFFLCLIVLSRLGH  322 (412)
Q Consensus       243 ls~~~~G~~~~~~avggllGt~l~~~l~~R~g~~r~~~~~~~~~~~~l~~~v~~~~~g~~~~~~~~~l~~~g~~~sr~GL  322 (412)
                      +++...|++.+..+++.++|.++.+++.+|.+..+....+.........   .......    ...  ...+....+++.
T Consensus       256 ~~~~~~g~~~~~~~~g~~ig~~~~~~l~~~~~~~~~l~~~~~~~~~~~~---~~~~~~~----~~~--~~~~~~~~g~~~  326 (417)
T PRK10489        256 MGAAQIGLLYAAVPLGAALGALTSGWLAHSARPGLLMLLSTLGSFLAVG---LFGLMPM----WIL--AVLCLALFGYLS  326 (417)
T ss_pred             CChhHhHHHHHHHHHHHHHHHHHHHHhhhccCcchHHHHHHHHHHHHHH---HHHccch----HHH--HHHHHHHHHHHH
Confidence            9999999999999999999999999999987776666655432221111   1111111    111  111222223333


Q ss_pred             hhhhhhhhHHhhccCCcccchhHHHHHHHHHHHHHHHHHHH-HHhccCCCchhHHHHHHHHHHHHHHHHHH
Q 015168          323 MSYDIVGAQILQTGIPSSKANLIGTTEISVASLVESVMLGV-AIIANDVSHFGFLATLSLLSVVGAAWMFC  392 (412)
Q Consensus       323 w~~dl~~~~l~Q~~vp~~~~G~v~g~~~sl~~~~~ll~~~~-~~~~~~~~~f~~l~~~s~~~v~~~~~~~~  392 (412)
                      -..+.....+.|+.+|++.||+++|+.++.++....+...+ +.+....+........+.+.+..+..++.
T Consensus       327 ~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~g~~l~G~l~~~~g~~~~~~~~~~~~~~~~~~~~~  397 (417)
T PRK10489        327 AISSLLQYTLLQTQTPDEMLGRINGLWTAQNVTGDAIGAALLGGLGAMMTPVASASASGFGLLIIGVLLLL  397 (417)
T ss_pred             HHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHhhhHhHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHH
Confidence            23455566788999999999999999999998744444444 45555445555555555554454554444

>TIGR00900 2A0121 H+ Antiporter protein

Probab=99.84  E-value=6.9e-18  Score=165.93  Aligned_cols=316  Identities=15%  Similarity=0.098  Sum_probs=198.9

Q ss_pred             hhHHHHHHhhhhhcchhccCCcHHHHHHHHHHHHHHHHHHHHHHHHHhccccccccchhHHHHHHHHHHHHHHHHHhhhh
Q 015168            4 FSKLILIVGGPLVGKLMDHSPRIPAYICLNTVQAAAQLLSAAMIIHAHTVIPTSSSMLLHPWFFVLVLAGAVERLTGVAL   83 (412)
Q Consensus         4 ~~~lp~ll~g~~~G~~vDr~~R~~v~~~~~~~q~~~v~~s~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~l~~~a~   83 (412)
                      +..++.++.+++.|.+.||++|||++..+.+...+...+.    .+.....+  .  ..+.+++..++.|........+.
T Consensus        42 ~~~~~~~i~~~~~G~l~dr~g~r~~~~~~~~~~~~~~~~~----~~~~~~~~--~--~~~~~~~~~~l~g~~~~~~~~~~  113 (365)
T TIGR00900        42 AGMLPYVVLSPIAGALADRYDRKKVMIGADLIRAVLVAVL----PFVALLGG--L--NIWQVYVLAGILAIAQAFFTPAY  113 (365)
T ss_pred             HHHHHHHHHHHhhhHHHHhhchhHHHHHHHHHHHHHHHHH----HHHHHcCC--C--cHHHHHHHHHHHHHHHHHHHHHH
Confidence            3467888999999999999999999888876554332211    11111110  0  11334555556666666555544


Q ss_pred             hhhhcccceeeecCCCchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhcChhHHHHHHHHHHHHHHHHHHHHHHHhhhc
Q 015168           84 GVAVERDWAVLLAGINRPIALAKANAVLNRIDLLCEIAGASLFGILLSKYEPVTCLKFAAGLIMWSLPVMIILTWFTNKI  163 (412)
Q Consensus        84 ~~ai~RDwv~~l~~~~~~~~L~~~Ns~l~~id~v~~llgP~lgG~L~~~~~~~~~~~~~~~~~~~s~~~~~~~l~~~~~~  163 (412)
                      .. +..|    +++++   +..+.|+..+....++.++||.++|.+.+..+|+..+++.+....++..    ....+ +.
T Consensus       114 ~~-~~~~----~~~~~---~~~~~~~~~~~~~~~g~~~g~~l~~~l~~~~g~~~~~~~~~~~~~~~~~----~~~~~-~~  180 (365)
T TIGR00900       114 QA-MLPD----LVPEE---QLTQANSLSQAVRSLFYIVGPGIGGLMYATLGIKWAIWVDAVGFAISAL----LIVSV-RI  180 (365)
T ss_pred             HH-HHHh----cCCHH---HHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHH----HHHhc-cc
Confidence            33 3334    66643   7899999999999999999999999999999999887654433333221    11111 22


Q ss_pred             cccccccccccccccCCCCCCCCCCchhhhHHhHHHHHHhHHHHhcCCcchHHHHHHHHHHHhhhccc-hHHHHHHHh-c
Q 015168          164 SSGVLDRAKCSQSCCRTSNEGPVPDADNIVDVGIEAIKLGWKEYMQQPVLPASLAYVLLCLNVVLTPG-SLMTAFLTQ-R  241 (412)
Q Consensus       164 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~v~~~~~~~a~l~~t~v~~~~-~~~~~y~~~-~  241 (412)
                      ||+  ++ ++.     +    + .+     ++..++..++++..+|+|.++..+....++........ ...+.|.++ +
T Consensus       181 ~~~--~~-~~~-----~----~-~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  242 (365)
T TIGR00900       181 PEL--AA-SEI-----Q----A-LS-----NAVLRDTREGIKFVLKNPLLRTLLLLALLFNLVFAPAIVALFPYVQSKYL  242 (365)
T ss_pred             ccC--CC-ccc-----c----c-cc-----hhHHHHHHhHHHHHHcCcHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHh
Confidence            221  00 000     0    0 00     12234567789999999988875555444421112222 345566665 8


Q ss_pred             CCCCchhHHHhhHHHHHHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHHhcCCCcCcchHHHHHHHHHHhhhh
Q 015168          242 GLNPSIIGGFSGLCASMGVAATFLSAYLVRRLGILKAGAAGLIFQASLLAMAVAVYWSGSLSQQNPLLFFLCLIVLSRLG  321 (412)
Q Consensus       242 gls~~~~G~~~~~~avggllGt~l~~~l~~R~g~~r~~~~~~~~~~~~l~~~v~~~~~g~~~~~~~~~l~~~g~~~sr~G  321 (412)
                      |.++.+.|.+.+..+++.++++++.+++.||.|+++....+......+...  ..+.. + +    ...+....+..+++
T Consensus       243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~--~~~~~-~-~----~~~~~~~~~~~g~~  314 (365)
T TIGR00900       243 GRGSTHYGWVLAAFGLGALLGALLLGLLGRYFKRMALMTGAIFVIGLAILV--VGLTP-P-N----FPLFLVLWFAIGVG  314 (365)
T ss_pred             CCchHHHHHHHHHHHHHHHHHHHHHHHHHHHhchhHHHHHHHHHHHHHHHH--HHhhc-h-h----HHHHHHHHHHHHHH
Confidence            999999999999999999999999999999999988776554322221111  11111 1 0    11111122222334


Q ss_pred             hhhhhhhhhHHhhccCCcccchhHHHHHHHHHHHHHHHHHHHHHh
Q 015168          322 HMSYDIVGAQILQTGIPSSKANLIGTTEISVASLVESVMLGVAII  366 (412)
Q Consensus       322 Lw~~dl~~~~l~Q~~vp~~~~G~v~g~~~sl~~~~~ll~~~~~~~  366 (412)
                      .-........+.|+.+|+++||++.|..++.++....+...++..
T Consensus       315 ~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~g~~~~g~  359 (365)
T TIGR00900       315 YGPINVPQGTLLQRRVPAELLGRVFGAQFSLSHAAWPLGLILAGP  359 (365)
T ss_pred             HHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            434566778889999999999999999999999877666655443

>PRK15402 multidrug efflux system translocase MdfA; Provisional

Probab=99.80  E-value=7.3e-16  Score=155.87  Aligned_cols=319  Identities=14%  Similarity=0.020  Sum_probs=185.2

Q ss_pred             hHHHHHHhhhhhcchhccCCcHHHHHHHHHHHHHHHHHHHHHHHHHhccccccccchhHHHHHHHHHHHHHHHHHhhhhh
Q 015168            5 SKLILIVGGPLVGKLMDHSPRIPAYICLNTVQAAAQLLSAAMIIHAHTVIPTSSSMLLHPWFFVLVLAGAVERLTGVALG   84 (412)
Q Consensus         5 ~~lp~ll~g~~~G~~vDr~~R~~v~~~~~~~q~~~v~~s~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~l~~~a~~   84 (412)
                      ..+...+..++.|.+.||++|||++..+.+.-.+.    +.  ...+...      . +.+++.-++.|...........
T Consensus        57 ~~~~~~~~~~~~G~l~dr~g~r~~l~~~~~~~~~~----~~--~~~~~~~------~-~~l~~~~~l~G~~~~~~~~~~~  123 (406)
T PRK15402         57 YLAGGMFLQWLLGPLSDRIGRRPVMLAGVAFFILT----CL--AILLAQS------I-EQFTLLRFLQGIGLCFIGAVGY  123 (406)
T ss_pred             HHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHH----HH--HHHHHcc------H-HHHHHHHHHHHhHhhhHHHHHH
Confidence            45677888899999999999999988876533222    21  1111111      1 2334444455555444433333


Q ss_pred             hhhcccceeeecCCCchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhcChhHHHHHHHHHHHHHHHHHHHHHHHhhhcc
Q 015168           85 VAVERDWAVLLAGINRPIALAKANAVLNRIDLLCEIAGASLFGILLSKYEPVTCLKFAAGLIMWSLPVMIILTWFTNKIS  164 (412)
Q Consensus        85 ~ai~RDwv~~l~~~~~~~~L~~~Ns~l~~id~v~~llgP~lgG~L~~~~~~~~~~~~~~~~~~~s~~~~~~~l~~~~~~~  164 (412)
                      ..+ .|    .++++   +..+.++........+..+||.+++.+.+..+|+.++++.+...+++..      ......|
T Consensus       124 ~~i-~~----~~~~~---~~~~~~~~~~~~~~~~~~~g~~i~~~l~~~~~w~~~~~~~~~~~~~~~~------~~~~~~~  189 (406)
T PRK15402        124 AAI-QE----SFEEA---DAIKITALMANVALLAPLLGPLVGAALIHVLPWRGMFVLFAALAALSFF------GLWRAMP  189 (406)
T ss_pred             HHH-HH----HhChh---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCccHHHHHHHHHHHHHHH------HHHHhCC
Confidence            333 34    44543   5778888888888888999999999999999999988765544444331      1112234


Q ss_pred             ccccccccccccccCCCCCCCCCCchhhhHHhHHHHHHhHHHHhcCCcchHHHHH-HHHHHHhhhccchHHHHHHH-hcC
Q 015168          165 SGVLDRAKCSQSCCRTSNEGPVPDADNIVDVGIEAIKLGWKEYMQQPVLPASLAY-VLLCLNVVLTPGSLMTAFLT-QRG  242 (412)
Q Consensus       165 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~v~~~~~~~-a~l~~t~v~~~~~~~~~y~~-~~g  242 (412)
                      |+ . ++++              +     +...++..++++..++||.++..... ...++. ...+....+.|.. ++|
T Consensus       190 ~~-~-~~~~--------------~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~p~~~~~~~g  247 (406)
T PRK15402        190 ET-A-GRVG--------------E-----KLSLKELGRDYKLVLKNRRFVAGALALGLVSLP-LLAWIALSPVILISGEQ  247 (406)
T ss_pred             CC-C-cccc--------------c-----cccHHHHHHHHHHHHcCcHHHHHHHHHHHHHHH-HHHHHHHhHHHHHHHhC
Confidence            31 1 0000              0     00123456788899999987763332 222221 1223333455654 589


Q ss_pred             CCCchhHHHhhHHHHHHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHH-HHhcCCCcCcchHHHHHHHHHHhhhh
Q 015168          243 LNPSIIGGFSGLCASMGVAATFLSAYLVRRLGILKAGAAGLIFQASLLAMAVA-VYWSGSLSQQNPLLFFLCLIVLSRLG  321 (412)
Q Consensus       243 ls~~~~G~~~~~~avggllGt~l~~~l~~R~g~~r~~~~~~~~~~~~l~~~v~-~~~~g~~~~~~~~~l~~~g~~~sr~G  321 (412)
                      +++.++|.......++.++|+.+.+++.+|+|.+|....+...+......... ....+.    ... .+..+++...+|
T Consensus       248 ~~~~~~g~~~~~~~~~~~~g~~~~g~l~~r~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~----~~~-~~~~~~~~~g~g  322 (406)
T PRK15402        248 LSSYEYGLLQVPVFGALIAGNLTLARLTSRRPLRSLIRMGLWPMVAGLLLAALATVISSH----AYL-WLTAGLSLYAFG  322 (406)
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHcccc----cHH-HHHHHHHHHHHH
Confidence            99999999988888899999999999999999988877665543322222111 111111    111 111222222223


Q ss_pred             hhhhhhhhhHHhhccCCcccchhHHHHHHHHHHHHHHHHHHHHHhc-cCCCchhHHHH
Q 015168          322 HMSYDIVGAQILQTGIPSSKANLIGTTEISVASLVESVMLGVAIIA-NDVSHFGFLAT  378 (412)
Q Consensus       322 Lw~~dl~~~~l~Q~~vp~~~~G~v~g~~~sl~~~~~ll~~~~~~~~-~~~~~f~~l~~  378 (412)
                      .-..........+. .+|+++|++++..+..++....+...+.... ...+.......
T Consensus       323 ~~~~~~~~~~~~~~-~~~~~~g~~~~~~~~~~~~~~~~g~~~~~~l~~~~~~~~~~~~  379 (406)
T PRK15402        323 IGLANAGLYRLTLF-SSDVSKGTVSAAMGMLSMLIFTVGIELSKHAYLGGGNGLFNLF  379 (406)
T ss_pred             HHHHhhhHHHHHhh-hccccccHHHHHHHHHHHHHHHHHHHHHHhcccCCchHHHHHH
Confidence            32222222223332 3569999999999999988665555555544 44444443333

>PRK11102 bicyclomycin/multidrug efflux system; Provisional

Probab=99.77  E-value=3.7e-15  Score=148.56  Aligned_cols=326  Identities=12%  Similarity=0.098  Sum_probs=186.7

Q ss_pred             hHHHHHHhhhhhcchhccCCcHHHHHHHHHHHHHHHHHHHHHHHHHhccccccccchhHHHHHHHHHHHHHHHHHhhhhh
Q 015168            5 SKLILIVGGPLVGKLMDHSPRIPAYICLNTVQAAAQLLSAAMIIHAHTVIPTSSSMLLHPWFFVLVLAGAVERLTGVALG   84 (412)
Q Consensus         5 ~~lp~ll~g~~~G~~vDr~~R~~v~~~~~~~q~~~v~~s~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~l~~~a~~   84 (412)
                      ..++..+.+++.|.+.||++||+++..+.+...+...      .......      . +.+++..++.|......+....
T Consensus        35 ~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~i~~~------~~~~~~~------~-~~~~~~~~l~g~~~~~~~~~~~  101 (377)
T PRK11102         35 YILGFAIGQLFYGPMADSFGRKPVILGGTLVFALAAV------ACALAQT------I-DQLIYMRFLHGLAAAAASVVIN  101 (377)
T ss_pred             HHHHHHHHHHhhchHHhhcCChHHHHHHHHHHHHHHH------HHHHHcc------H-HHHHHHHHHHHHHHHHHHHHHH
Confidence            4567788899999999999999998887665433311      1111111      1 2333434445554444444333


Q ss_pred             hhhcccceeeecCCCchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhcChhHHHHHHHHHHHHHHHHHHHHHHHhhhcc
Q 015168           85 VAVERDWAVLLAGINRPIALAKANAVLNRIDLLCEIAGASLFGILLSKYEPVTCLKFAAGLIMWSLPVMIILTWFTNKIS  164 (412)
Q Consensus        85 ~ai~RDwv~~l~~~~~~~~L~~~Ns~l~~id~v~~llgP~lgG~L~~~~~~~~~~~~~~~~~~~s~~~~~~~l~~~~~~~  164 (412)
                      . +..|    .++++   +..+.++.......++.+++|.++|.+....+|+..+++.+....+...      ......+
T Consensus       102 ~-~~~~----~~~~~---~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~  167 (377)
T PRK11102        102 A-LMRD----MFPKE---EFSRMMSFVTLVMTIAPLLAPIIGGWLLVWFSWHAIFWVLALAAILAAA------LVFFFIP  167 (377)
T ss_pred             H-HHHH----hcCHH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcChHHHHHHHHHHHHHHHH------HHHHhCC
Confidence            2 2234    55543   6889999999999999999999999999989999887654444333321      1112233


Q ss_pred             ccccccccccccccCCCCCCCCCCchhhhHHhHHHHHHhHHHHhcCCcchHHHHHHHHHHHhhhcc-chHHHHHHHhcCC
Q 015168          165 SGVLDRAKCSQSCCRTSNEGPVPDADNIVDVGIEAIKLGWKEYMQQPVLPASLAYVLLCLNVVLTP-GSLMTAFLTQRGL  243 (412)
Q Consensus       165 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~v~~~~~~~a~l~~t~v~~~-~~~~~~y~~~~gl  243 (412)
                      |+. +++++           + +       ...++..+.++..++||.++.......+.+.....+ ...++.|.+..|+
T Consensus       168 ~~~-~~~~~-----------~-~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~  227 (377)
T PRK11102        168 ETL-PKERR-----------Q-P-------FHLRTTIRNFASLFRHKRVLGYMLASGFSFAGMFSFLTAGPFVYIELNGV  227 (377)
T ss_pred             ccC-ccccc-----------C-C-------CChHHHHHHHHHHHcChHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHhCC
Confidence            311 11000           0 0       011223456777888887665333322221100111 1123344556899


Q ss_pred             CCchhHHHhhHHHHHHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHHhcCCCcCcchHHHHHHHHHHhhhhhh
Q 015168          244 NPSIIGGFSGLCASMGVAATFLSAYLVRRLGILKAGAAGLIFQASLLAMAVAVYWSGSLSQQNPLLFFLCLIVLSRLGHM  323 (412)
Q Consensus       244 s~~~~G~~~~~~avggllGt~l~~~l~~R~g~~r~~~~~~~~~~~~l~~~v~~~~~g~~~~~~~~~l~~~g~~~sr~GLw  323 (412)
                      ++...|...+..+++++.+..+.+++.+|+|.+|....+...+.............+. +  .....+..++.....+. 
T Consensus       228 s~~~~g~~~~~~~~~~~~~~~~~g~l~~r~g~~~~~~~~~~~~~~~~~~~~~~~~~~~-~--~~~~~~~~~~~~~~~~~-  303 (377)
T PRK11102        228 SPQNFGYYFALNIVFLFVMTIINSRFVRRVGALNMLRFGLWIQFIMGIWLVVSALLDL-G--FWALVVGVAAFVGCVSM-  303 (377)
T ss_pred             CHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHHHhh-h--HHHHHHHHHHHHHHHHH-
Confidence            9999999999999999999999999999999999887776544433222221111111 0  11111111111111222 


Q ss_pred             hhhhhhhHHhhccCCcccchhHHHHHHHHHHHHHHHHHHHHHhccCCCchhHHHHHHHHH
Q 015168          324 SYDIVGAQILQTGIPSSKANLIGTTEISVASLVESVMLGVAIIANDVSHFGFLATLSLLS  383 (412)
Q Consensus       324 ~~dl~~~~l~Q~~vp~~~~G~v~g~~~sl~~~~~ll~~~~~~~~~~~~~f~~l~~~s~~~  383 (412)
                       .........|+.. |+++|++++..++.++..+.+.........+.+..+....+.++.
T Consensus       304 -~~~~~~~~~~~~~-~~~~g~~~~~~~~~~~~~g~~~g~~~~~~~~~~~~~~~~~~~~~~  361 (377)
T PRK11102        304 -ISSNAMAVILDEF-PHMAGTASSLAGTLRFGIGAIVGALLSLAPFTSAWPMVWSMAFCS  361 (377)
T ss_pred             -hhHHHHHHHhccc-cccchHHHHHHHHHHHHHHHHHHHHHHhccCCChHHHHHHHHHHH
Confidence             2222233455554 489999999999888765554444444445555556555555443

>TIGR00901 2A0125 AmpG-related permease

Probab=99.77  E-value=5e-16  Score=154.06  Aligned_cols=301  Identities=16%  Similarity=0.038  Sum_probs=181.2

Q ss_pred             HHHHHHhhhhhcchhccC-----CcHHH-HHHHHHHHHHHHHHHHHHHHHHhccccccccchhHHHHHHHHHHHHHHHHH
Q 015168            6 KLILIVGGPLVGKLMDHS-----PRIPA-YICLNTVQAAAQLLSAAMIIHAHTVIPTSSSMLLHPWFFVLVLAGAVERLT   79 (412)
Q Consensus         6 ~lp~ll~g~~~G~~vDr~-----~R~~v-~~~~~~~q~~~v~~s~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~l~   79 (412)
                      .+|+.+ ++..|.++||+     +|||. +..+++...+.    ..  ...+....  .  ..+.++...++.+......
T Consensus        32 ~~~~~~-~~~~g~~~Dr~~~~~~Grr~~~l~~~~~~~~~~----~~--~l~~~~~~--~--~l~~l~~~~~~~~~~~~~~  100 (356)
T TIGR00901        32 GLPYSL-KFLWSPLVDTVYLPFFGRRRSWLVLTQVLLLSL----LL--ILSFLVPS--T--DLPLLAGLAFLIAFFSATQ  100 (356)
T ss_pred             HHHHHH-HHHHHHHHhcccCCCCCccHHHHHHHHHHHHHH----HH--HHHcCCcc--h--hHHHHHHHHHHHHHHHHHH
Confidence            678875 99999999998     57775 56565533222    11  11122111  1  1123444444555555555


Q ss_pred             hhhhhhhhcccceeeecCCCchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhcC--------hhHHHHHHHHHHHHHHH
Q 015168           80 GVALGVAVERDWAVLLAGINRPIALAKANAVLNRIDLLCEIAGASLFGILLSKYE--------PVTCLKFAAGLIMWSLP  151 (412)
Q Consensus        80 ~~a~~~ai~RDwv~~l~~~~~~~~L~~~Ns~l~~id~v~~llgP~lgG~L~~~~~--------~~~~~~~~~~~~~~s~~  151 (412)
                      +.+.+.     |++..++++   +..++|+.......++.+++|.+++.+....+        |+..+++.+....+...
T Consensus       101 ~~~~~a-----~~~~~~~~~---~r~~~~~~~~~~~~~G~~~~~~l~~~l~~~~g~~~~~~~~wr~~f~i~ai~~l~~~~  172 (356)
T TIGR00901       101 DIALDA-----WRLEILSDE---ELGYGSTIYIVGYRAGMLLSGSLALVLASPEFANTGLITLWGYIFFWTALLILPGLL  172 (356)
T ss_pred             HHHHHH-----HHHHhCCHh---hhchHHHHHHHHHHHHHHHHHHHHHHHhhhcccccccccccHHHHHHHHHHHHHHHH
Confidence            555444     444467643   78999999999999999999999999999888        99988654443333221


Q ss_pred             HHHHHHHHhhhccccccccccccccccCCCCCCCCCCchhhhHHhHHHHHHhHHHHhcCCc---chHHHHHHHHH-HHhh
Q 015168          152 VMIILTWFTNKISSGVLDRAKCSQSCCRTSNEGPVPDADNIVDVGIEAIKLGWKEYMQQPV---LPASLAYVLLC-LNVV  227 (412)
Q Consensus       152 ~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~v---~~~~~~~a~l~-~t~v  227 (412)
                            ......+|+  +++++.          +        ++..++..++++..++||.   ++.......++ +. .
T Consensus       173 ------~~~~~~~e~--~~~~~~----------~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~  225 (356)
T TIGR00901       173 ------VTLFLAKEP--QEDASV----------P--------KPLTQAVLKPIREFFQRKNMIQALLLLLLIVLYKLG-D  225 (356)
T ss_pred             ------HHHHhccCC--Cccccc----------c--------hhHHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHH-H
Confidence                  111112221  000000          0        0112334568888888886   33322222222 21 1


Q ss_pred             hccchHHHHHHHhcCCCCchhHHHhhHHH-HHHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHHhcCCCcC--
Q 015168          228 LTPGSLMTAFLTQRGLNPSIIGGFSGLCA-SMGVAATFLSAYLVRRLGILKAGAAGLIFQASLLAMAVAVYWSGSLSQ--  304 (412)
Q Consensus       228 ~~~~~~~~~y~~~~gls~~~~G~~~~~~a-vggllGt~l~~~l~~R~g~~r~~~~~~~~~~~~l~~~v~~~~~g~~~~--  304 (412)
                      .......+.|++++|+++.++|.+.+..+ ++++.|.++.+++.+|+|++|...++...+.......  .+.......  
T Consensus       226 ~~~~~~~~~~l~~~g~~~~~~g~~~~~~~~~~~~~g~~~~g~l~~r~g~~~~l~~~~~~~~~~~~~~--~~~~~~~~~~~  303 (356)
T TIGR00901       226 SAATVLTTLFLLDMGFSKEEIALVAKINGLLGAILGGLIGGIIMQPLNILYALLLFGIVQALTNAGF--VWLASNGHHDG  303 (356)
T ss_pred             HHHHHHHHHHHHHcCCCHHHHHHHhHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHH--HHHHhcCcccc
Confidence            23344567788779999999999998655 6889999999999999999888776665443322211  111101000  


Q ss_pred             --cchHHHHHHHHHHhhhhhhhhhhhhhHHhhccCCcccchhHHHHHHHHHH
Q 015168          305 --QNPLLFFLCLIVLSRLGHMSYDIVGAQILQTGIPSSKANLIGTTEISVAS  354 (412)
Q Consensus       305 --~~~~~l~~~g~~~sr~GLw~~dl~~~~l~Q~~vp~~~~G~v~g~~~sl~~  354 (412)
                        ...........++..++.-....+...++||.+|+++||++.|+..++++
T Consensus       304 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~  355 (356)
T TIGR00901       304 ITFPHLLMLFLTITLEAVTGGLGTVAFVAFLSKLSNPKFGATQMALLSSLSA  355 (356)
T ss_pred             cccchHHHHHHHHHHHHHHhHHHHHHHHHHHHHhcCCCccHHHHHHHHHHHh
Confidence              00111111223333444445888999999999999999999999998875

>PRK15403 multidrug efflux system protein MdtM; Provisional

Probab=99.76  E-value=2.3e-15  Score=153.35  Aligned_cols=318  Identities=12%  Similarity=0.053  Sum_probs=180.9

Q ss_pred             HHHHHhhhhhcchhccCCcHHHHHHHHHHHHHHHHHHHHHHHHHhccccccccchhHHHHHHHHHHHHHHHHHhhhhhhh
Q 015168            7 LILIVGGPLVGKLMDHSPRIPAYICLNTVQAAAQLLSAAMIIHAHTVIPTSSSMLLHPWFFVLVLAGAVERLTGVALGVA   86 (412)
Q Consensus         7 lp~ll~g~~~G~~vDr~~R~~v~~~~~~~q~~~v~~s~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~l~~~a~~~a   86 (412)
                      +...+..++.|.+.||++|||++..+.++..+.    ..  .......      . +.+++.-++.|..+...... ..+
T Consensus        62 ~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~----~~--~~~~a~~------~-~~l~~~r~l~Gi~~~~~~~~-~~~  127 (413)
T PRK15403         62 AGGMALQWLLGPLSDRIGRRPVLITGALIFTLA----CA--ATLFTTS------M-TQFLIARFIQGTSICFIATV-GYV  127 (413)
T ss_pred             HHHHHHHHhhhHHHHHcCchHHHHHHHHHHHHH----HH--HHHHcCC------H-HHHHHHHHHHHHHHHHHHHH-HHH
Confidence            455677889999999999999988886644332    11  1112211      1 23444445555555433332 234


Q ss_pred             hcccceeeecCCCchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhcChhHHHHHHHHHHHHHHHHHHHHHHHhhhcccc
Q 015168           87 VERDWAVLLAGINRPIALAKANAVLNRIDLLCEIAGASLFGILLSKYEPVTCLKFAAGLIMWSLPVMIILTWFTNKISSG  166 (412)
Q Consensus        87 i~RDwv~~l~~~~~~~~L~~~Ns~l~~id~v~~llgP~lgG~L~~~~~~~~~~~~~~~~~~~s~~~~~~~l~~~~~~~~~  166 (412)
                      +.+|    .++++   +..+.++.......++..+||.++|.+.+..||+..|++......+...      .....+||.
T Consensus       128 ~~~~----~~~~~---~~~~~~~~~~~~~~~~~~~g~~lg~~l~~~~gw~~~f~~~~~~~~i~~~------~~~~~lp~~  194 (413)
T PRK15403        128 TVQE----AFGQT---KGIKLMAIITSIVLVAPIIGPLSGAALMHFVHWKVLFAIIAVMGLIAFV------GLLLAMPET  194 (413)
T ss_pred             HHHH----hcCHH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHH------HHHHhCCCC
Confidence            4555    55543   6889999999999999999999999999989999988765554444331      111234441


Q ss_pred             ccccccccccccCCCCCCCCCCchhhhHHhHHHHHHhHHHHhcCCcchHHHHHHHHH-HHhhhccchHHHHHHHh-cCCC
Q 015168          167 VLDRAKCSQSCCRTSNEGPVPDADNIVDVGIEAIKLGWKEYMQQPVLPASLAYVLLC-LNVVLTPGSLMTAFLTQ-RGLN  244 (412)
Q Consensus       167 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~v~~~~~~~a~l~-~t~v~~~~~~~~~y~~~-~gls  244 (412)
                       .+ ++++          +         ...++..++|+..+|||.++.......+. .. ...+....+.|+++ .|++
T Consensus       195 -~~-~~~~----------~---------~~~~~~~~~~~~ll~~~~~~~~~l~~~~~~~~-~~~~~~~~P~~l~~~~g~s  252 (413)
T PRK15403        195 -VK-RGAV----------P---------FSAKSVLRDFRNVFRNRLFLTGAATLSLSYIP-MMSWVAVSPVILIDAGGMT  252 (413)
T ss_pred             -cc-ccCC----------C---------CChHHHHHHHHHHHcCHHHHHHHHHHHHHHHH-HHHHHHhChHHHHHhcCCC
Confidence             11 0000          0         01223456888899999888744432222 22 12333334556664 6999


Q ss_pred             CchhHHHhhHHHHHHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHH-HHHHhcCCCcCcchHHHHHHHHHHhhhhhh
Q 015168          245 PSIIGGFSGLCASMGVAATFLSAYLVRRLGILKAGAAGLIFQASLLAMA-VAVYWSGSLSQQNPLLFFLCLIVLSRLGHM  323 (412)
Q Consensus       245 ~~~~G~~~~~~avggllGt~l~~~l~~R~g~~r~~~~~~~~~~~~l~~~-v~~~~~g~~~~~~~~~l~~~g~~~sr~GLw  323 (412)
                      +..+|+.......+++.++.+..++.+|.+..|................ ........  . .....+...+...+.|+ 
T Consensus       253 ~~~~gl~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~ig~~l~~~~~~~~~~--~-~~~~~~~~~l~~~G~~~-  328 (413)
T PRK15403        253 TSQFAWTQVPVFGAVIVANAIVARFVKDPTEPRFIWRAVPIQLVGLALLIVGNLLWPH--V-WLWSVLGTSLYAFGIGL-  328 (413)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHhccCCchhHHHHHHHHHHHHHHHHHHHHHHccc--c-HHHHHHHHHHHHHHHHH-
Confidence            9999999988888999999999998876655555432222222221111 11111111  1 11111111122223344 


Q ss_pred             hhhhhhh-HHhhccCCcccchhHHHHHHHHHHHHHHHHHHH-HHhccCCCchhHHHHHH
Q 015168          324 SYDIVGA-QILQTGIPSSKANLIGTTEISVASLVESVMLGV-AIIANDVSHFGFLATLS  380 (412)
Q Consensus       324 ~~dl~~~-~l~Q~~vp~~~~G~v~g~~~sl~~~~~ll~~~~-~~~~~~~~~f~~l~~~s  380 (412)
                      .+++... .+.|.   +..+|+++|+++.++++........ +.+.......++.....
T Consensus       329 ~~p~~~~~al~~~---~~~~G~a~a~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~  384 (413)
T PRK15403        329 IFPTLFRFTLFSN---NLPKGTVSASLNMVILMVMAVSVEIGRWLWFNGGRLPFHLLAV  384 (413)
T ss_pred             HhHHHHHHHhccC---CCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHcCCchHHHHHHH
Confidence            3333333 33444   3347999999999998854444444 33334444444444443

>PRK11646 multidrug resistance protein MdtH; Provisional

Probab=99.76  E-value=1.3e-15  Score=154.34  Aligned_cols=300  Identities=13%  Similarity=0.031  Sum_probs=177.8

Q ss_pred             HHHHHHhhhhhcchhccCCcHHHHHHHHHHHHHHHHHHHHHHHHHhccccccccchhHHHHHHHHHHHHHHHHHhhhhhh
Q 015168            6 KLILIVGGPLVGKLMDHSPRIPAYICLNTVQAAAQLLSAAMIIHAHTVIPTSSSMLLHPWFFVLVLAGAVERLTGVALGV   85 (412)
Q Consensus         6 ~lp~ll~g~~~G~~vDr~~R~~v~~~~~~~q~~~v~~s~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~l~~~a~~~   85 (412)
                      .++..++++..|.+.||++||+++..+++........      .....+      . +.+++..++.|..+..+..+.+.
T Consensus        56 ~l~~~~~~~~~G~l~dr~g~k~~l~~~~~~~~~~~~~------~~~~~~------~-~~l~~~~~l~g~~~~~~~~~~~~  122 (400)
T PRK11646         56 QFIQQGLGIFGGAIADRFGAKPMIVTGMLMRAAGFAT------MAIAHE------P-WLLWLSCILSGLGGTLFDPPRTA  122 (400)
T ss_pred             HHHHHHHHhhhhHHHHHhCchHHHHHHHHHHHHHHHH------HHHhcc------H-HHHHHHHHHHHHHHHHHHHHHHH
Confidence            5677788999999999999999999998766443221      111111      1 23444445566666555554443


Q ss_pred             hhcccceeeecCCCchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhcChhHHHHHHHHHHHHHHHHHHHHHHHhhhccc
Q 015168           86 AVERDWAVLLAGINRPIALAKANAVLNRIDLLCEIAGASLFGILLSKYEPVTCLKFAAGLIMWSLPVMIILTWFTNKISS  165 (412)
Q Consensus        86 ai~RDwv~~l~~~~~~~~L~~~Ns~l~~id~v~~llgP~lgG~L~~~~~~~~~~~~~~~~~~~s~~~~~~~l~~~~~~~~  165 (412)
                      .+ .|    .++++   +..++++..+..+.++..+||.++|.+. ..+|+..+++.+...++....    ..  ...||
T Consensus       123 ~~-~~----~~~~~---~~~~a~~~~~~~~~~g~~ig~~l~g~l~-~~g~~~~f~~~~~~~~~~~i~----~~--~~~~~  187 (400)
T PRK11646        123 LV-IK----LIRPH---QRGRFFSLLMMQDSAGAVIGALLGSWLL-QYDFRLVCATGAVLFVLAAAF----NA--WLLPA  187 (400)
T ss_pred             HH-HH----hcCHH---HHHHHHHHHHHHHHHHHHHHHHHHHHHH-HhhHHHHHHHHHHHHHHHHHH----HH--HhCCc
Confidence            33 23    45543   7899999999999999999999999999 579998887655444333211    11  12232


Q ss_pred             cccccccccccccCCCCCCCCCCchhhhHHhHHHHHHhHHHHhcCCcchHHHHHHHHHHHhhhccchHHHHHHHhcCCCC
Q 015168          166 GVLDRAKCSQSCCRTSNEGPVPDADNIVDVGIEAIKLGWKEYMQQPVLPASLAYVLLCLNVVLTPGSLMTAFLTQRGLNP  245 (412)
Q Consensus       166 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~v~~~~~~~a~l~~t~v~~~~~~~~~y~~~~gls~  245 (412)
                      +   ++++              +        .++..++++.+++||.++........+...........+.|.++.+.++
T Consensus       188 ~---~~~~--------------~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~  242 (400)
T PRK11646        188 Y---KLST--------------V--------RTPVREGMTRVLRDKRFVTYVLTLTGYYMLAVQVMLMLPIMVNDIAGSP  242 (400)
T ss_pred             c---cccc--------------c--------chhhHHHHHHHHcCchHHHHHHHHHHHHHHHHHHHHhhhhhHHhhcCCc
Confidence            1   0000              0        0123457888899998775333222221101112223566777766688


Q ss_pred             chhHHHhhHHHHHHHHHHHHHH-HHHHHhchhhHHHHHHHHHHHHHHHHHHHHhcCCCcCcchHHHHHHHHHHhhhhhhh
Q 015168          246 SIIGGFSGLCASMGVAATFLSA-YLVRRLGILKAGAAGLIFQASLLAMAVAVYWSGSLSQQNPLLFFLCLIVLSRLGHMS  324 (412)
Q Consensus       246 ~~~G~~~~~~avggllGt~l~~-~l~~R~g~~r~~~~~~~~~~~~l~~~v~~~~~g~~~~~~~~~l~~~g~~~sr~GLw~  324 (412)
                      ..+|.+.+..+++++.+..... +..||.+..+....+.........  ...... .    ......  ..++...|...
T Consensus       243 ~~~g~l~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~--~l~~~~-~----~~~~~~--~~~l~~~g~~~  313 (400)
T PRK11646        243 SAVKWMYAIEACLSLTLLYPIARWSEKRFRLEHRLMAGLLIMSLSMF--PIGMVS-N----LQQLFT--LICLFYIGSII  313 (400)
T ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHHH--HHHHhh-h----HHHHHH--HHHHHHHHHHH
Confidence            9999999888887775554444 455677766655544332211111  111111 1    111111  11112223334


Q ss_pred             hhhhhhHHhhccCCcccchhHHHHHHHHHHHHHHHHHHHHHhc
Q 015168          325 YDIVGAQILQTGIPSSKANLIGTTEISVASLVESVMLGVAIIA  367 (412)
Q Consensus       325 ~dl~~~~l~Q~~vp~~~~G~v~g~~~sl~~~~~ll~~~~~~~~  367 (412)
                      .+.....+.++.+|++++|++.|..+...+....+.+.+....
T Consensus       314 ~~p~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~ig~~l~G~l  356 (400)
T PRK11646        314 AEPARETLSASLADARARGSYMGFSRLGLALGGAIGYIGGGWL  356 (400)
T ss_pred             HHccHHHHHHhcCCcccchhhhhHHHHHHHHHHHhcccchHHH
Confidence            5566778899999999999999999998887655555554433

>PRK03545 putative arabinose transporter; Provisional

Probab=99.76  E-value=5.4e-15  Score=148.83  Aligned_cols=298  Identities=11%  Similarity=-0.007  Sum_probs=169.2

Q ss_pred             HHHHHHhhhhhcchhccCCcHHHHHHHHHHHHHHHHHHHHHHHHHhccccccccchhHHHHHHHHHHHHHHHHHhhhhhh
Q 015168            6 KLILIVGGPLVGKLMDHSPRIPAYICLNTVQAAAQLLSAAMIIHAHTVIPTSSSMLLHPWFFVLVLAGAVERLTGVALGV   85 (412)
Q Consensus         6 ~lp~ll~g~~~G~~vDr~~R~~v~~~~~~~q~~~v~~s~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~l~~~a~~~   85 (412)
                      .+...++.++.|.+.||++|||++..+.+.-.+    ++.  ...+..       ..+.+++.-++.|............
T Consensus        54 ~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~----~~~--~~~~~~-------~~~~l~~~r~~~G~~~~~~~~~~~~  120 (390)
T PRK03545         54 AWVVALMSLPLMLLTSNVERRKLLIGLFVLFIA----SHV--LSALAW-------NFTVLLISRIGIAFAHAIFWSITAS  120 (390)
T ss_pred             HHHHHHHHHHHHHHHcCCChHHHHHHHHHHHHH----HHH--HHHHhc-------cHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            456677889999999999999998888653322    221  111111       1123444444555554444333332


Q ss_pred             hhcccceeeecCCCchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhcChhHHHHHHHHHHHHHHHHHHHHHHHhhhccc
Q 015168           86 AVERDWAVLLAGINRPIALAKANAVLNRIDLLCEIAGASLFGILLSKYEPVTCLKFAAGLIMWSLPVMIILTWFTNKISS  165 (412)
Q Consensus        86 ai~RDwv~~l~~~~~~~~L~~~Ns~l~~id~v~~llgP~lgG~L~~~~~~~~~~~~~~~~~~~s~~~~~~~l~~~~~~~~  165 (412)
                      .+. |    .++++   +..++++........+..+||.+++.+.+..||+..+++.+...++...      .....+||
T Consensus       121 ~i~-~----~~~~~---~r~~~~g~~~~~~~~g~~ig~~l~~~l~~~~gw~~~f~~~~~~~~l~~~------~~~~~~~~  186 (390)
T PRK03545        121 LAI-R----VAPAG---KKAQALSLLATGTALAMVLGLPLGRVIGQYLGWRTTFLAIGGGALITLL------LLIKLLPL  186 (390)
T ss_pred             HHH-H----hCChh---hhhhHHHHHHHHHHHHHHHHhhHHHHHHHHhcHHHHHHHHHHHHHHHHH------HHHHhCCC
Confidence            222 3    45543   6889999999999999999999999999999999988765544433321      11112232


Q ss_pred             cccccccccccccCCCCCCCCCCchhhhHHhHHHHHHhHHHHhcCCcchHHHHHHHHHHHhhhccchHHHHHHH-hcCCC
Q 015168          166 GVLDRAKCSQSCCRTSNEGPVPDADNIVDVGIEAIKLGWKEYMQQPVLPASLAYVLLCLNVVLTPGSLMTAFLT-QRGLN  244 (412)
Q Consensus       166 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~v~~~~~~~a~l~~t~v~~~~~~~~~y~~-~~gls  244 (412)
                      +    ++++             +      ..    .+.++..+|+|.++.......++........+..+.|+. +.|+|
T Consensus       187 ~----~~~~-------------~------~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~s  239 (390)
T PRK03545        187 L----PSEH-------------S------GS----LKSLPLLFRRPALVSLYLLTVVVVTAHFTAYSYIEPFVQQVAGLS  239 (390)
T ss_pred             C----CCCC-------------c------ch----HHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCC
Confidence            1    0100             0      00    123556788888766443333221101111222344555 47999


Q ss_pred             CchhHHHhhHHHHHHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHHhcCCCcCcchHHHHHHHHHHhhhhhhh
Q 015168          245 PSIIGGFSGLCASMGVAATFLSAYLVRRLGILKAGAAGLIFQASLLAMAVAVYWSGSLSQQNPLLFFLCLIVLSRLGHMS  324 (412)
Q Consensus       245 ~~~~G~~~~~~avggllGt~l~~~l~~R~g~~r~~~~~~~~~~~~l~~~v~~~~~g~~~~~~~~~l~~~g~~~sr~GLw~  324 (412)
                      +...|.+....+++++.|+++.+++.+|.|+++ ..++.......  ........++    .....  ...++.+++...
T Consensus       240 ~~~~~~~~~~~~~~~~~g~~~~g~l~dr~~~~~-~~~~~~~~~~~--~~~l~~~~~~----~~~~~--~~~~l~g~~~~~  310 (390)
T PRK03545        240 ENFATLLLLLFGGAGIIGSVLFSRLGNRHPSGF-LLIAIALLLVC--LLLLLPAANS----EWHLS--VLSIFWGIAIMC  310 (390)
T ss_pred             ccHHHHHHHHHHHHHHHHHHHHHHHhhccchhH-HHHHHHHHHHH--HHHHHHHhch----HHHHH--HHHHHHHHHHhc
Confidence            999999999999999999999999999998754 33333221111  1111111111    11111  111111223322


Q ss_pred             hhhhhhHHhhccCCcccchhHHHHHHHHHHHHHHHHHHHHHhc
Q 015168          325 YDIVGAQILQTGIPSSKANLIGTTEISVASLVESVMLGVAIIA  367 (412)
Q Consensus       325 ~dl~~~~l~Q~~vp~~~~G~v~g~~~sl~~~~~ll~~~~~~~~  367 (412)
                      .........|+..| +++|++.|..+++.+....+...+....
T Consensus       311 ~~~~~~~~~~~~~~-~~~~~~~g~~~~~~~~g~~~G~~~~G~~  352 (390)
T PRK03545        311 IGLAMQVKVLKLAP-DATDVAMALFSGIFNIGIGAGALLGNQV  352 (390)
T ss_pred             chHHHHHHHHHhCC-CcHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            33444555666545 6889999999988776333334443333

>TIGR00710 efflux_Bcr_CflA drug resistance transporter, Bcr/CflA subfamily

Probab=99.76  E-value=7e-15  Score=146.33  Aligned_cols=319  Identities=13%  Similarity=0.026  Sum_probs=183.7

Q ss_pred             HHHHHHhhhhhcchhccCCcHHHHHHHHHHHHHHHHHHHHHHHHHhccccccccchhHHHHHHHHHHHHHHHHHhhhhhh
Q 015168            6 KLILIVGGPLVGKLMDHSPRIPAYICLNTVQAAAQLLSAAMIIHAHTVIPTSSSMLLHPWFFVLVLAGAVERLTGVALGV   85 (412)
Q Consensus         6 ~lp~ll~g~~~G~~vDr~~R~~v~~~~~~~q~~~v~~s~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~l~~~a~~~   85 (412)
                      .+...+..++.|.+.||++|||++..+.+...+.    ..  ...+...      . +.+++..++.|........+...
T Consensus        50 ~~~~~~~~~~~g~l~d~~g~r~~~~~~~~~~~~~----~~--~~~~~~~------~-~~~~~~~~l~g~~~~~~~~~~~~  116 (385)
T TIGR00710        50 LLGFAAGQLLWGPLSDRYGRRPVLLLGLFIFALS----SL--GLALSNN------I-ETLLVLRFVQAFGASAGSVISQA  116 (385)
T ss_pred             HHHHHHHHHhhhhHHHhcCChHHHHHHHHHHHHH----HH--HHHHHcc------H-HHHHHHHHHHHcchhHHHHHHHH
Confidence            4566788999999999999999988776533222    21  1111111      1 23344444555555444444433


Q ss_pred             hhcccceeeecCCCchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhcChhHHHHHHHHHHHHHHHHHHHHHHHhhhccc
Q 015168           86 AVERDWAVLLAGINRPIALAKANAVLNRIDLLCEIAGASLFGILLSKYEPVTCLKFAAGLIMWSLPVMIILTWFTNKISS  165 (412)
Q Consensus        86 ai~RDwv~~l~~~~~~~~L~~~Ns~l~~id~v~~llgP~lgG~L~~~~~~~~~~~~~~~~~~~s~~~~~~~l~~~~~~~~  165 (412)
                       +..|    .++++   +..+.++.......++..+||.++|.+.+..+|+..+++.....++....      .....||
T Consensus       117 -~~~~----~~~~~---~~~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~  182 (385)
T TIGR00710       117 -LVRD----IYPGE---ELSRIYSILMPVLALAPAVAPLLGGYILVWLSWHAIFAFLSLAGILLSAL------IFFILPE  182 (385)
T ss_pred             -HHHH----hcCcH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHH------HHHhCCC
Confidence             3335    45543   78899999999999999999999999999999998876544433332211      1112333


Q ss_pred             cccccccccccccCCCCCCCCCCchhhhHHhHHHHHHhHHHHhcCCcchHHHHHH-HHHHHhhhccchHHHHHHH-hcCC
Q 015168          166 GVLDRAKCSQSCCRTSNEGPVPDADNIVDVGIEAIKLGWKEYMQQPVLPASLAYV-LLCLNVVLTPGSLMTAFLT-QRGL  243 (412)
Q Consensus       166 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~v~~~~~~~a-~l~~t~v~~~~~~~~~y~~-~~gl  243 (412)
                      +. +  ++.          +  +       ..++..+.++..+++|.++...... ..+.. ...+....+.|.+ ++|.
T Consensus       183 ~~-~--~~~----------~--~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~g~  239 (385)
T TIGR00710       183 TL-P--YEA----------R--I-------QISTYFETFLLLLKSKMFWGYALIYGASFGG-FFAFFSGAPFVYIDIMGV  239 (385)
T ss_pred             CC-C--Ccc----------c--C-------CHHHHHHHHHHHHcCchhHHHHHHHHHHHHH-HHHHHHcChHHHHHHcCC
Confidence            11 0  000          0  0       0112234677778888877633322 22211 1112222344554 6899


Q ss_pred             CCchhHHHhhHHHHHHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHHhcCCCcCcchHHHHHHHHHHhhhhhh
Q 015168          244 NPSIIGGFSGLCASMGVAATFLSAYLVRRLGILKAGAAGLIFQASLLAMAVAVYWSGSLSQQNPLLFFLCLIVLSRLGHM  323 (412)
Q Consensus       244 s~~~~G~~~~~~avggllGt~l~~~l~~R~g~~r~~~~~~~~~~~~l~~~v~~~~~g~~~~~~~~~l~~~g~~~sr~GLw  323 (412)
                      ++...|.+.+...++++.|..+.+++.+|+|.++...++.....+..............  ......  .......+|..
T Consensus       240 ~~~~~g~~~~~~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~--~~~~~~g~~~~  315 (385)
T TIGR00710       240 SPSVFGLLFALNIIAMIFGGFLNGRFIKKWGAKSLLRMGLILFAVSAVLLEITAILGLG--SWAMII--GPMMFVGIGNS  315 (385)
T ss_pred             CHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHhccc--hHHHHH--HHHHHHHHHHH
Confidence            99999999999999999999999999999999888776654433322222111111110  111111  11111122221


Q ss_pred             -hhhhhhhHHhhccCCcccchhHHHHHHHHHHHHHHHHHHHHHhccCCCchhHHHHHH
Q 015168          324 -SYDIVGAQILQTGIPSSKANLIGTTEISVASLVESVMLGVAIIANDVSHFGFLATLS  380 (412)
Q Consensus       324 -~~dl~~~~l~Q~~vp~~~~G~v~g~~~sl~~~~~ll~~~~~~~~~~~~~f~~l~~~s  380 (412)
                       .+.....+..++  .|+++|++++..++.++..+.+.........+....+......
T Consensus       316 ~~~~~~~~~~~~~--~~~~~g~~~~~~~~~~~~~g~i~~~~~~~~~~~~~~~~~~~~~  371 (385)
T TIGR00710       316 MISSIAMAYALED--FPHVAGTASALFGTLRLVLGAIVGYLVSLIHGNTAWPMSLSCL  371 (385)
T ss_pred             HHHHHHHHHHhcc--CcccchHHHHHHHHHHHHHHHHHHHHHHhccccChHHHHHHHH
Confidence             233444444443  4578999999999999876555555554455544444444443

This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 12 membrane-spanning regions. Members with known activity include Bcr (bicyclomycin resistance protein) in E. coli, Flor (chloramphenicol and florfenicol resistance) in Salmonella typhimurium DT104, and CmlA (chloramphenicol resistance) in Pseudomonas sp. plasmid R1033.

>PRK11652 emrD multidrug resistance protein D; Provisional

Probab=99.75  E-value=8.9e-15  Score=147.24  Aligned_cols=320  Identities=13%  Similarity=0.069  Sum_probs=183.1

Q ss_pred             hHHHHHHhhhhhcchhccCCcHHHHHHHHHHHHHHHHHHHHHHHHHhccccccccchhHHHHHHHHHHHHHHHHHhhhhh
Q 015168            5 SKLILIVGGPLVGKLMDHSPRIPAYICLNTVQAAAQLLSAAMIIHAHTVIPTSSSMLLHPWFFVLVLAGAVERLTGVALG   84 (412)
Q Consensus         5 ~~lp~ll~g~~~G~~vDr~~R~~v~~~~~~~q~~~v~~s~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~l~~~a~~   84 (412)
                      ..++..+..++.|.+.||++|||++..+.+...+.    ..  .......      . +.+++..++.|......... .
T Consensus        52 ~~~~~~~~~~~~G~l~Dr~grr~~~~~~~~~~~~~----~~--~~~~~~~------~-~~l~~~~~~~g~~~~~~~~~-~  117 (394)
T PRK11652         52 YLLTYGLSQLFYGPLSDRVGRRPVILVGMSIFILG----TL--VALFAHS------L-TVLIAASAIQGLGTGVGGVM-A  117 (394)
T ss_pred             HHHHHHHHHHhhhhHHHhcCChHHHHHHHHHHHHH----HH--HHHHHcc------H-HHHHHHHHHHHhhhhHHHHH-H
Confidence            45788899999999999999999988775533222    11  1111111      1 22333334444433332222 2


Q ss_pred             hhhcccceeeecCCCchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhcChhHHHHHHHHHHHHHHHHHHHHHHHhhhcc
Q 015168           85 VAVERDWAVLLAGINRPIALAKANAVLNRIDLLCEIAGASLFGILLSKYEPVTCLKFAAGLIMWSLPVMIILTWFTNKIS  164 (412)
Q Consensus        85 ~ai~RDwv~~l~~~~~~~~L~~~Ns~l~~id~v~~llgP~lgG~L~~~~~~~~~~~~~~~~~~~s~~~~~~~l~~~~~~~  164 (412)
                      .++.+|    .++++   +..++|+.......++.++||.++|.+.+..+|+..+++.....++...      ......|
T Consensus       118 ~~~~~~----~~~~~---~~~~~~~~~~~~~~~~~~~g~~i~~~l~~~~g~~~~f~~~~~~~~~~~~------~~~~~~~  184 (394)
T PRK11652        118 RTLPRD----LYEGT---QLRHANSLLNMGILVSPLLAPLIGGLLTTLFGWRACYLFLLLLGAGVTF------SMARWMP  184 (394)
T ss_pred             HHHHHH----hcCHH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHhccChHHHHHHHHHHHHHHHH------HHHHhCC
Confidence            233445    44432   7889999999999999999999999999988999887764433332221      1112233


Q ss_pred             ccccccccccccccCCCCCCCCCCchhhhHHhHHHHHHhHHHHhcCCcchHHHHHHHHHHHhhhccchHHHHHHHh-cCC
Q 015168          165 SGVLDRAKCSQSCCRTSNEGPVPDADNIVDVGIEAIKLGWKEYMQQPVLPASLAYVLLCLNVVLTPGSLMTAFLTQ-RGL  243 (412)
Q Consensus       165 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~v~~~~~~~a~l~~t~v~~~~~~~~~y~~~-~gl  243 (412)
                      |+ ++  ++.             +        .++..++++..++||.++..+......+.....+......|.++ +|.
T Consensus       185 ~~-~~--~~~-------------~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~  240 (394)
T PRK11652        185 ET-RP--ADA-------------R--------RTRVLASYRTLLSNRRFNCYLLMLIGTLAGIAVFEACSGVLMGAVLGL  240 (394)
T ss_pred             cc-Cc--ccc-------------c--------hhHHHHHHHHHHcChHHHHHHHHHHHHHHHHHHHHHhChHHHHHHcCC
Confidence            31 10  000             0        01245678888999987763333222211012222233446655 899


Q ss_pred             CCchhHHHhhHHHHHHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHHhcCCCcCcchHHHHHHHHHHhhhhhh
Q 015168          244 NPSIIGGFSGLCASMGVAATFLSAYLVRRLGILKAGAAGLIFQASLLAMAVAVYWSGSLSQQNPLLFFLCLIVLSRLGHM  323 (412)
Q Consensus       244 s~~~~G~~~~~~avggllGt~l~~~l~~R~g~~r~~~~~~~~~~~~l~~~v~~~~~g~~~~~~~~~l~~~g~~~sr~GLw  323 (412)
                      ++...|++.....++.++|+.+.+++.+|.+  +....+.....................  .........+.....|. 
T Consensus       241 ~~~~~~~~~~~~~~~~~~g~~~~~~l~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~g~~~-  315 (394)
T PRK11652        241 SSMTVSILFILPIPAAFFGAWFAGRPNKRFS--TLMWQSVICCLLAGLLMWIPGWFGVMN--VWTLLVPAALFFFGAGM-  315 (394)
T ss_pred             CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHhcccc--HHHHHHHHHHHHHHHHH-
Confidence            9999999999999999999999999999998  233333222111111111111111101  11111111222223333 


Q ss_pred             hhhhhhhHHhhccCCcccchhHHHHHHHHHHHHHHHHHHHHHhccCCCchhHHHHHHHH
Q 015168          324 SYDIVGAQILQTGIPSSKANLIGTTEISVASLVESVMLGVAIIANDVSHFGFLATLSLL  382 (412)
Q Consensus       324 ~~dl~~~~l~Q~~vp~~~~G~v~g~~~sl~~~~~ll~~~~~~~~~~~~~f~~l~~~s~~  382 (412)
                       .........++..| +++|+++++.++.++....+...+.....+...++....+..+
T Consensus       316 -~~~~~~~~~~~~~~-~~~g~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~  372 (394)
T PRK11652        316 -LFPLATSGAMEPFP-YLAGTAGALLGGLQNIGSGLAALLSAMLPQTGQFSLGLLMTLM  372 (394)
T ss_pred             -HHHHHHHHHHhhcc-ccchHHHHHHHHHHHHHHHHHHHHHHHccCCchHHHHHHHHHH
Confidence             33444445555555 6889999999999887666666666666655556655544433

>PRK11043 putative transporter; Provisional

Probab=99.75  E-value=1.2e-14  Score=146.74  Aligned_cols=313  Identities=12%  Similarity=-0.009  Sum_probs=181.6

Q ss_pred             hHHHHHHhhhhhcchhccCCcHHHHHHHHHHHHHHHHHHHHHHHHHhccccccccchhHHHHHHHHHHHHHHHHHhhhhh
Q 015168            5 SKLILIVGGPLVGKLMDHSPRIPAYICLNTVQAAAQLLSAAMIIHAHTVIPTSSSMLLHPWFFVLVLAGAVERLTGVALG   84 (412)
Q Consensus         5 ~~lp~ll~g~~~G~~vDr~~R~~v~~~~~~~q~~~v~~s~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~l~~~a~~   84 (412)
                      ..++..+.+++.|.+.||++||+++..+.+.-.+.    +.  ...+...      . +.+++.-++.|......... .
T Consensus        50 ~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~----~~--~~~~~~~------~-~~l~~~~~l~G~~~~~~~~~-~  115 (401)
T PRK11043         50 FLAGFALGQLLWGPLSDRYGRKPVLLAGLSLFALG----SL--GMLWVES------A-AQLLVLRFVQAVGVCSAAVI-W  115 (401)
T ss_pred             HHHHHHHHHHhhhhHHhhcCCcHHHHHHHHHHHHH----HH--HHHHhcC------H-HHHHHHHHHHHhhhHHHHHH-H
Confidence            35567788999999999999999988776533221    11  1112111      1 22333333333332222222 2


Q ss_pred             hhhcccceeeecCCCchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhcChhHHHHHHHHHHHHHHHHHHHHHHHhhhcc
Q 015168           85 VAVERDWAVLLAGINRPIALAKANAVLNRIDLLCEIAGASLFGILLSKYEPVTCLKFAAGLIMWSLPVMIILTWFTNKIS  164 (412)
Q Consensus        85 ~ai~RDwv~~l~~~~~~~~L~~~Ns~l~~id~v~~llgP~lgG~L~~~~~~~~~~~~~~~~~~~s~~~~~~~l~~~~~~~  164 (412)
                      .++..|    .++++   +..+.++.......++..++|.++|.+....+|+..++.......+...     ..  ...+
T Consensus       116 ~~~~~~----~~~~~---~~~~~~~~~~~~~~~~~~~g~~i~~~l~~~~g~~~~~~~~~~~~~~~~~-----~~--~~~~  181 (401)
T PRK11043        116 QALVID----RYPAQ---KANRVFATIMPLVALSPALAPLLGAWLLNHFGWQAIFATLFAITLLLIL-----PT--LRLK  181 (401)
T ss_pred             HHHHHH----hcCcH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHH-----HH--HHcC
Confidence            233445    45443   6778888888888899999999999999999999887654443333321     11  1222


Q ss_pred             ccccccccccccccCCCCCCCCCCchhhhHHhHHHHHHhHHHHhcCCcchHHHH-HHHHHHHhhhccchHHHHHHHhcCC
Q 015168          165 SGVLDRAKCSQSCCRTSNEGPVPDADNIVDVGIEAIKLGWKEYMQQPVLPASLA-YVLLCLNVVLTPGSLMTAFLTQRGL  243 (412)
Q Consensus       165 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~v~~~~~~-~a~l~~t~v~~~~~~~~~y~~~~gl  243 (412)
                      |+..  +++.             +          +..++++..+++|.++.... ....... ...+....+.|.++.|+
T Consensus       182 ~~~~--~~~~-------------~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~p~~~~~~g~  235 (401)
T PRK11043        182 PSKK--ARKQ-------------S----------QDALTFKQLLKSKTYLGNVLIFAACSAA-FFAWLTGSPFILEQMGY  235 (401)
T ss_pred             CCCC--cccc-------------c----------hHHHHHHHHHcChhHHHHHHHHHHHHHH-HHHHHHHhHHHHHHcCC
Confidence            2110  0000             0          01246777788887765222 1111111 11222334567777899


Q ss_pred             CCchhHHHhhHHHHHHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHHhcCCCcCcchHHHHHHHHHHhhhhhh
Q 015168          244 NPSIIGGFSGLCASMGVAATFLSAYLVRRLGILKAGAAGLIFQASLLAMAVAVYWSGSLSQQNPLLFFLCLIVLSRLGHM  323 (412)
Q Consensus       244 s~~~~G~~~~~~avggllGt~l~~~l~~R~g~~r~~~~~~~~~~~~l~~~v~~~~~g~~~~~~~~~l~~~g~~~sr~GLw  323 (412)
                      ++...|+.....+++.+.|+++.+++.+|+|.+|...+......++.............+ ..... ....+.....|. 
T Consensus       236 s~~~~g~~~~~~~~~~~~g~~~~~~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~-~~~~~~~~~~~~-  312 (401)
T PRK11043        236 SPADIGLSYVPQTIAFLVGGYGCRAALQKWGGEQLLPWLLVLFAVSVIAIWLASLLSHPS-LVPLL-IPFCVMAAANGA-  312 (401)
T ss_pred             CHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHhccCc-HHHHH-HHHHHHHHHHHH-
Confidence            999999999999999999999999999999998876555443333322222111111111 11111 111122223344 


Q ss_pred             hhhhhhhHHhhccCCcccchhHHHHHHHHHHHHHHHHHHHHHhccCCCchhHH
Q 015168          324 SYDIVGAQILQTGIPSSKANLIGTTEISVASLVESVMLGVAIIANDVSHFGFL  376 (412)
Q Consensus       324 ~~dl~~~~l~Q~~vp~~~~G~v~g~~~sl~~~~~ll~~~~~~~~~~~~~f~~l  376 (412)
                      .++.......|+  .|+++|++.|++++++++...+....+..+.+...+...
T Consensus       313 ~~~~~~~~~~~~--~~~~~g~~~g~~~~~~~~~~~~~~~~~g~l~~~~~~~~~  363 (401)
T PRK11043        313 IYPIVVAQALRP--FPQATGKAAALQNTLQLGLCFLASLLVSALISTPLLTTG  363 (401)
T ss_pred             HHHHHHHHHhhh--CcccChHHHHHHHHHHHHHHHHHHHHHHHccCCChhHHH
Confidence            455555555555  457899999999999998777777776666665445443

>PRK08633 2-acyl-glycerophospho-ethanolamine acyltransferase; Validated

Probab=99.75  E-value=1.8e-15  Score=172.03  Aligned_cols=314  Identities=15%  Similarity=0.072  Sum_probs=191.1

Q ss_pred             hhHHHHHHhhhhhcchhccCCcHHHHHHHHHHHHHHHHHHHHHHHHHhccccccccchhHHHHHHHHHHHHHHHHHhhhh
Q 015168            4 FSKLILIVGGPLVGKLMDHSPRIPAYICLNTVQAAAQLLSAAMIIHAHTVIPTSSSMLLHPWFFVLVLAGAVERLTGVAL   83 (412)
Q Consensus         4 ~~~lp~ll~g~~~G~~vDr~~R~~v~~~~~~~q~~~v~~s~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~l~~~a~   83 (412)
                      +..+|.+++++++|.+.||++||+++..+.+++.+..++...  .. ...       ..+.+++..++.|....+...+.
T Consensus        55 ~~~l~~~l~~~~~G~l~Dr~grk~~l~~~~~~~~~~~~~~~~--~~-~~~-------~~~~l~~~r~l~G~~~~~~~~~~  124 (1146)
T PRK08633         55 LFLLPFLLLSSPAGFLADKFSKNRVIRIVKLFEVGLTLLIVL--AY-YLG-------WFWLAFAVTFLLGAQSAIYSPAK  124 (1146)
T ss_pred             HHHHHHHHHhhhHhhhcccccHHHHHHHHHHHHHHHHHHHHH--HH-HHc-------cHHHHHHHHHHHHHHHHhhchHH
Confidence            457889999999999999999999999988766554332211  11 111       11345555566777776666554


Q ss_pred             hhhhcccceeeecCCCchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhh--------cC-hhHHHHHHHHHHHHHHHHHH
Q 015168           84 GVAVERDWAVLLAGINRPIALAKANAVLNRIDLLCEIAGASLFGILLSK--------YE-PVTCLKFAAGLIMWSLPVMI  154 (412)
Q Consensus        84 ~~ai~RDwv~~l~~~~~~~~L~~~Ns~l~~id~v~~llgP~lgG~L~~~--------~~-~~~~~~~~~~~~~~s~~~~~  154 (412)
                      . ++..|    +++++   +..++|+.......++.++||.++|.+...        .+ |...+.+.   .+....+.+
T Consensus       125 ~-~~i~~----~~~~~---~r~~~~~~~~~~~~ig~~lg~~l~~~l~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~  193 (1146)
T PRK08633        125 Y-GIIPE----LVGKE---NLSRANGLLEAFTIVAILAGTALFSFLFESVNGNTPSEILGRIAPAGLV---LLAVAVLGL  193 (1146)
T ss_pred             H-hhhHH----hcCcc---cchhhhhHHHHHHHHHHHHHHHHHHHHHHhhccccccccccchHHHHHH---HHHHHHHHH
Confidence            3 33334    66654   789999999999999999999999999886        22 22222111   111111111


Q ss_pred             HHHHHhhhccccccccccccccccCCCCCCCCCCchhhhHHhHHHHHHhHHHHhcCCcchHHHHHHHHHHHhhhccchHH
Q 015168          155 ILTWFTNKISSGVLDRAKCSQSCCRTSNEGPVPDADNIVDVGIEAIKLGWKEYMQQPVLPASLAYVLLCLNVVLTPGSLM  234 (412)
Q Consensus       155 ~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~v~~~~~~~a~l~~t~v~~~~~~~  234 (412)
                         ....++++. ++.++..  . ++      .+     ....++..++++..+++|.++..+....++......+....
T Consensus       194 ---~~~~~~~~~-~~~~~~~--~-~~------~~-----~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~  255 (1146)
T PRK08633        194 ---IFAYRLPKV-PAAAPEV--F-DK------KK-----YLFPKLLWRNLKLLRSDRVLWLAIIGLSYFWFISQLAQANF  255 (1146)
T ss_pred             ---HHHhcCcCC-CCCCccc--c-cc------cc-----cccHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHhh
Confidence               111233331 1110000  0 00      00     11234566789999999987764443333311112233345


Q ss_pred             HHHHH-hcCCCCc-hhHHHhhHHHHHHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHHhcCCCcCcchHHHHH
Q 015168          235 TAFLT-QRGLNPS-IIGGFSGLCASMGVAATFLSAYLVRRLGILKAGAAGLIFQASLLAMAVAVYWSGSLSQQNPLLFFL  312 (412)
Q Consensus       235 ~~y~~-~~gls~~-~~G~~~~~~avggllGt~l~~~l~~R~g~~r~~~~~~~~~~~~l~~~v~~~~~g~~~~~~~~~l~~  312 (412)
                      +.|.. .+|+++. ..|++.+..+++.++|+++.+++.+|++..+...++.....++...   ..+.++    .  ..+.
T Consensus       256 ~~~~~~~~g~s~~~~~g~~~~~~~ig~~~g~~~~g~l~~r~~~~~~~~~~~~~~~~~~~~---~~~~~~----~--~~~~  326 (1146)
T PRK08633        256 PAYAKEVLGLDNTFQVQYLLAASAIGIGIGSLLAGRLSGRHIELGLVPLGALGLALSLFL---LPTAPS----L--ASVL  326 (1146)
T ss_pred             HHHHHHHhCCCcHHHHHHHHHHHHHHHHHHHHHHHHHhCCceEccchhHHHHHHHHHHHH---HHHhhh----H--HHHH
Confidence            56665 5899999 9999999999999999999999999999877766554432222111   111111    1  1111


Q ss_pred             HHHHHhhhhhhhhhhhhhHHhhccCCcccchhHHHHHHHHHHHHHHHHHHHHH
Q 015168          313 CLIVLSRLGHMSYDIVGAQILQTGIPSSKANLIGTTEISVASLVESVMLGVAI  365 (412)
Q Consensus       313 ~g~~~sr~GLw~~dl~~~~l~Q~~vp~~~~G~v~g~~~sl~~~~~ll~~~~~~  365 (412)
                      .+.++.+++..++......+.|+.+|++.||++.|+.++++++...+...++.
T Consensus       327 ~~~~~~g~~~~~~~~~~~~~~~~~~p~~~rg~~~~~~~~~~~lg~~~~~~~~~  379 (1146)
T PRK08633        327 VLFFLFGFSAGLFIVPLNALIQFRAPEKELGKVLAANNFLQNVGMLLFLALTT  379 (1146)
T ss_pred             HHHHHHHHHHHHhhHHHHHHHhhcCCccchhhhhHHHHHHHHHHHHHHHHHHH
Confidence            12222233443456677888999999999999999999999875544444443

>PRK11902 ampG muropeptide transporter; Reviewed

Probab=99.74  E-value=1.1e-14  Score=147.27  Aligned_cols=293  Identities=15%  Similarity=0.042  Sum_probs=170.0

Q ss_pred             HHHHHHhhhhhcchhccC-----CcH-HHHHHHHHHHHHHHHHHHHHHHHHhccccccccchhHHHHHHHHHHHHHHHHH
Q 015168            6 KLILIVGGPLVGKLMDHS-----PRI-PAYICLNTVQAAAQLLSAAMIIHAHTVIPTSSSMLLHPWFFVLVLAGAVERLT   79 (412)
Q Consensus         6 ~lp~ll~g~~~G~~vDr~-----~R~-~v~~~~~~~q~~~v~~s~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~l~   79 (412)
                      .+| .++.+..|.++||+     +|| +.+..+++...++..+     .. +.. +. .  ..+.++...++.+......
T Consensus        43 ~~~-~~~~~l~g~~~Dr~~~~~~g~rr~~l~~~~~~~~l~~~~-----l~-~~~-~~-~--~~~~l~~~~~~~~~~~~~~  111 (402)
T PRK11902         43 GQA-YIFKFLWAPLMDRYTPPLLGRRRGWLLLTQVGLAASIAA-----MA-FCP-PH-A--ALWPLAGLAVLVAFLSASQ  111 (402)
T ss_pred             HHH-HHHHHHHHHHHHcccccCCCcchhHHHHHHHHHHHHHHH-----HH-hcC-cc-c--hHHHHHHHHHHHHHHHHHH
Confidence            455 47899999999999     454 5788876644333221     11 111 11 1  1123344434455555555


Q ss_pred             hhhhhhhhcccceeeecCCCchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhh-cChhHHHHHHHHHHHHHHHHHHHHHH
Q 015168           80 GVALGVAVERDWAVLLAGINRPIALAKANAVLNRIDLLCEIAGASLFGILLSK-YEPVTCLKFAAGLIMWSLPVMIILTW  158 (412)
Q Consensus        80 ~~a~~~ai~RDwv~~l~~~~~~~~L~~~Ns~l~~id~v~~llgP~lgG~L~~~-~~~~~~~~~~~~~~~~s~~~~~~~l~  158 (412)
                      +.+.+..     ++..++++   +..+.|+.......++.++||.+++.+.+. .||+..+++.+....+...     . 
T Consensus       112 ~~~~~al-----~~~~~~~~---~r~~~~~~~~~g~~~g~i~g~~l~~~l~~~~~gw~~~f~i~a~~~l~~~l-----~-  177 (402)
T PRK11902        112 DIVFDAY-----STDVLHPE---ERGAGAAVKVLGYRLAMLVSGGLALWLADRVLGWGNTYLLMAGLMLAGAL-----T-  177 (402)
T ss_pred             HHHHHHH-----HHHhcChh---hhhHHHHHHHHHHHHHHHHHhHHHHHHHhcccCHHHHHHHHHHHHHHHHH-----H-
Confidence            5554433     33355543   689999999988899999999999999985 5999988765544333221     1 


Q ss_pred             HhhhccccccccccccccccCCCCCCCCCCchhhhHHhHHHHHHhHHHHhcCCcchHHHHHHHHHHHhhhccchHHHHHH
Q 015168          159 FTNKISSGVLDRAKCSQSCCRTSNEGPVPDADNIVDVGIEAIKLGWKEYMQQPVLPASLAYVLLCLNVVLTPGSLMTAFL  238 (412)
Q Consensus       159 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~v~~~~~~~a~l~~t~v~~~~~~~~~y~  238 (412)
                       ....+|++.  ++++            ++      ...++..++++.++|||.++..+....++......+......|.
T Consensus       178 -~~~~~e~~~--~~~~------------~~------~~~~~~~~~~~~l~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~l  236 (402)
T PRK11902        178 -TLWAPEPEV--PARP------------PR------SLGEAVVGPLRDFFSRRGAWALLLLIVLYKLGDAFAGSLSTTFL  236 (402)
T ss_pred             -HHhcCCCcc--cccc------------cc------hhHHHHHHHHHHHHhCcCHHHHHHHHHHHHhHHHHHHHHHHHHH
Confidence             123343211  1100            00      11223567899999999988866554444210111112222334


Q ss_pred             -HhcCCCCchhHHHhhH-HHHHHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHH-HHhcCCCcCcchHHHHHHH-
Q 015168          239 -TQRGLNPSIIGGFSGL-CASMGVAATFLSAYLVRRLGILKAGAAGLIFQASLLAMAVA-VYWSGSLSQQNPLLFFLCL-  314 (412)
Q Consensus       239 -~~~gls~~~~G~~~~~-~avggllGt~l~~~l~~R~g~~r~~~~~~~~~~~~l~~~v~-~~~~g~~~~~~~~~l~~~g-  314 (412)
                       +++|+++..+|+..+. +.++++.|+.+.+++.+|+|.+|...++...+......... ...+++    ...+..... 
T Consensus       237 ~~~~G~~~~~~g~~~~~~~~~~~i~g~~~~g~l~~r~g~~~~l~~~~~~~~l~~l~~~~~~~~~~~----~~~~~~~~~~  312 (402)
T PRK11902        237 IRGAGFSAGEVGIVNKTLGLAATIVGALAGGTLMVRLGLYRSLMLFGVLQAVSNLGYWVLAVTPKH----LWTMALAIGI  312 (402)
T ss_pred             HHhcCCCHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhcCCc----HHHHHHHHHH
Confidence             5689999999999866 45678999999999999999988876665543332222111 121111    111111110 


Q ss_pred             -HHHhhhhhhhhhhhhhHHhhccCCcccchhHHHH
Q 015168          315 -IVLSRLGHMSYDIVGAQILQTGIPSSKANLIGTT  348 (412)
Q Consensus       315 -~~~sr~GLw~~dl~~~~l~Q~~vp~~~~G~v~g~  348 (412)
                       -+....+..........+.|+..|.++++..+++
T Consensus       313 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  347 (402)
T PRK11902        313 ENLCGGMGTAAFVALLMALCNRSFSATQYALLSAL  347 (402)
T ss_pred             HHHHHHHHHHHHHHHHHHhcCCCCcHHHHHHHHHH
Confidence             1233344445667777888888887776654444

>PF07690 MFS_1: Major Facilitator Superfamily; InterPro: IPR011701 Among the different families of transporter, only two occur ubiquitously in all classifications of organisms

Probab=99.74  E-value=4.2e-16  Score=152.66  Aligned_cols=308  Identities=16%  Similarity=0.096  Sum_probs=191.0

Q ss_pred             hhHHHHHHhhhhhcchhccCCcHHHHHHHHHHHHHHHHHHHHHHHHHhccccccccchhHHHHHHHHHHHHHHHHHhhhh
Q 015168            4 FSKLILIVGGPLVGKLMDHSPRIPAYICLNTVQAAAQLLSAAMIIHAHTVIPTSSSMLLHPWFFVLVLAGAVERLTGVAL   83 (412)
Q Consensus         4 ~~~lp~ll~g~~~G~~vDr~~R~~v~~~~~~~q~~~v~~s~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~l~~~a~   83 (412)
                      +..++..+++++.|.+.||++|||++..+.+...+. .  .. ..  +. .   +  . +.+++..++.|..+.....+.
T Consensus        40 ~~~~~~~~~~~~~g~l~dr~g~r~~l~~~~~~~~~~-~--~~-~~--~~-~---~--~-~~~~~~~~l~g~~~~~~~~~~  106 (352)
T PF07690_consen   40 AFFLGSALFSPFAGYLSDRFGRRRVLIIGLLLFALG-S--LL-LA--FA-S---N--F-WLLLIARFLLGIGSGFFSPAS  106 (352)
T ss_dssp             HHHHHHHHHHHHHHHHHHHS-HHHHHHHHHHHHHHH-H--HH-HH--HH-C---C--H-HHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHcCCeeeEeehhhhhhhH-H--HH-hh--hh-h---h--H-HHHhhhccccccccccccccc
Confidence            356788899999999999999999999998766554 1  11 11  21 1   1  2 244555556777666666555


Q ss_pred             hhhhcccceeeecCCCchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhcChhHHHHHHHHHHHHHHHHHHHHHHHhhhc
Q 015168           84 GVAVERDWAVLLAGINRPIALAKANAVLNRIDLLCEIAGASLFGILLSKYEPVTCLKFAAGLIMWSLPVMIILTWFTNKI  163 (412)
Q Consensus        84 ~~ai~RDwv~~l~~~~~~~~L~~~Ns~l~~id~v~~llgP~lgG~L~~~~~~~~~~~~~~~~~~~s~~~~~~~l~~~~~~  163 (412)
                      ...+. |    .++++   +..+.|+.......++.++||.++|.+.+..+|+..+++.+....++..     +.. ...
T Consensus       107 ~~~i~-~----~~~~~---~~~~~~~~~~~~~~~g~~~g~~l~~~l~~~~~~~~~~~~~~~~~~~~~i-----l~~-~~~  172 (352)
T PF07690_consen  107 NALIA-D----WFPPE---ERGRAFGILSAGFSLGSILGPLLGGFLISYFGWRWAFLISAILSLIAAI-----LFI-LFL  172 (352)
T ss_dssp             HHHHH-H----CCCTC---CHHHHHHHHHHHHHHHHHHHHHHHHHCCCHCHHCCHHHHHHHHHHHHHH-----HHH-CCC
T ss_pred             ccccc-c----cchhh---hhhhccccccchhhhhhhcccchhhhhhhccccccccccccchhhhhhh-----hHh-hhh
Confidence            44333 4    56653   7899999999999999999999999999889999988765555554432     111 111


Q ss_pred             cccccccccccccccCCCCCCCCCCchhhhHHhHHHHHHhHHHHhcCCcchHHHHHHHHH-HHhhhccchHHHHHH-Hhc
Q 015168          164 SSGVLDRAKCSQSCCRTSNEGPVPDADNIVDVGIEAIKLGWKEYMQQPVLPASLAYVLLC-LNVVLTPGSLMTAFL-TQR  241 (412)
Q Consensus       164 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~v~~~~~~~a~l~-~t~v~~~~~~~~~y~-~~~  241 (412)
                      ++++.  +++.+ +.++       + +   +...++..++++..+++|.++..+....++ +. ...+....+.|+ +.+
T Consensus       173 ~~~~~--~~~~~-~~~~-------~-~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~l~~~~  237 (352)
T PF07690_consen  173 PEPPP--PRERE-SPKE-------S-E---SKKPKPLKPGFKSLFKNPVLWILLIAFFLFFFV-FSGFSFFLPLYLQEVL  237 (352)
T ss_dssp             ---ST--TTT---SSTT-------T-T-----HHHCCCH-CTHHHHHHCCHHHHHHHHHHHHH-HHHHHHHHHHHCCHHH
T ss_pred             hhccc--ccccc-cccc-------c-c---cccccccccccccccccchhhhhhhhhhHHHHH-HHHhhcccchhhhhcc
Confidence            22111  11100 0000       0 0   011223334788888998776322222222 12 133444566674 468


Q ss_pred             CCC-CchhHHHhhHHHHHHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHHhcCCCcCcchHHHHHHHHHHhhh
Q 015168          242 GLN-PSIIGGFSGLCASMGVAATFLSAYLVRRLGILKAGAAGLIFQASLLAMAVAVYWSGSLSQQNPLLFFLCLIVLSRL  320 (412)
Q Consensus       242 gls-~~~~G~~~~~~avggllGt~l~~~l~~R~g~~r~~~~~~~~~~~~l~~~v~~~~~g~~~~~~~~~l~~~g~~~sr~  320 (412)
                      |.+ +...|.+.+...+.++.+..+.+++.+|+|.++...+...........   .......  ....... ...++.++
T Consensus       238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~--~~~~~~~-~~~~~~g~  311 (352)
T PF07690_consen  238 GFSGPSQAGLLFSIFGIVGIIGSLLAGRLSDRFGRRRRLLIAILLLILGALG---LLLLPFS--SSPVWLI-IALFLIGF  311 (352)
T ss_dssp             HCCTHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHH---HCCSHHH--CHHHHHH-HHHHHHHH
T ss_pred             CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHH---HHHHHHh--hhHHHHH-HHHHHHHH
Confidence            999 799999999999999999999999999999877766554432221111   1111100  0011111 12222233


Q ss_pred             hhhhhhhhhhHHhhccCCcccchhHHHHHHHHHHHHHHH
Q 015168          321 GHMSYDIVGAQILQTGIPSSKANLIGTTEISVASLVESV  359 (412)
Q Consensus       321 GLw~~dl~~~~l~Q~~vp~~~~G~v~g~~~sl~~~~~ll  359 (412)
                      +....+.....+.|+.+|++++|++.|+.++.++....+
T Consensus       312 ~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~~~~i  350 (352)
T PF07690_consen  312 GFGIVFPILFSLIQELVPPEYRGTAFGLFNSIGSLGGII  350 (352)
T ss_dssp             HHHHHCHHHHHHHHCCCHTCHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHH
Confidence            444467889999999999999999999999999876554

These are the ATP-Binding Cassette (ABC) superfamily and the Major Facilitator Superfamily (MFS). The MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients [, ].; GO: 0055085 transmembrane transport, 0016021 integral to membrane; PDB: 2GFP_B 3O7P_A 3O7Q_A 1PW4_A.

>PRK09874 drug efflux system protein MdtG; Provisional

Probab=99.74  E-value=1.4e-14  Score=145.80  Aligned_cols=332  Identities=14%  Similarity=0.053  Sum_probs=180.8

Q ss_pred             hHHHHHHhhhhhcchhccCCcHHHHHHHHHHHHHHHHHHHHHHHHHhccccccccchhHHHHHHHHHHHHHHHHHhhhhh
Q 015168            5 SKLILIVGGPLVGKLMDHSPRIPAYICLNTVQAAAQLLSAAMIIHAHTVIPTSSSMLLHPWFFVLVLAGAVERLTGVALG   84 (412)
Q Consensus         5 ~~lp~ll~g~~~G~~vDr~~R~~v~~~~~~~q~~~v~~s~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~l~~~a~~   84 (412)
                      ..+...+.+++.|.+.||++||+++..+.+...+.    +.  +.....       ..+.+++..++.|.........  
T Consensus        63 ~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~----~~--~~~~~~-------~~~~~~~~~~~~g~~~~~~~~~--  127 (408)
T PRK09874         63 TFLFSAIASPFWGGLADRKGRKIMLLRSALGMGIV----MV--LMGLAQ-------NIWQFLILRALLGLLGGFVPNA--  127 (408)
T ss_pred             HHHHHHHHHHHHHHHhhhhCcHHHHHHHHHHHHHH----HH--HHHHHh-------hHHHHHHHHHHHHHhhhhHHhH--
Confidence            34566788999999999999999988776543322    21  111111       1123333334444433332222  


Q ss_pred             hhhcccceeeecCCCchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhcChhHHHHHHHHHHHHHHHHHHHHHHHhhhcc
Q 015168           85 VAVERDWAVLLAGINRPIALAKANAVLNRIDLLCEIAGASLFGILLSKYEPVTCLKFAAGLIMWSLPVMIILTWFTNKIS  164 (412)
Q Consensus        85 ~ai~RDwv~~l~~~~~~~~L~~~Ns~l~~id~v~~llgP~lgG~L~~~~~~~~~~~~~~~~~~~s~~~~~~~l~~~~~~~  164 (412)
                      .+...|    .++++   +..++|+.......++.+++|.++|.+.+..+|+.++++......+....      .....+
T Consensus       128 ~~~~~~----~~~~~---~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~  194 (408)
T PRK09874        128 NALIAT----QVPRN---KSGWALGTLSTGGVSGALLGPLAGGLLADSYGLRPVFFITASVLFLCFLV------TLFCIR  194 (408)
T ss_pred             HHHHHH----hcCHh---hhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHH------HHHHhc
Confidence            222223    44432   67889999999999999999999999999899998876644433333211      111223


Q ss_pred             ccccccccccccccCCCCCCCCCCchhhhHHhHHHHHHhHHHHhcCCcchH-HHHHHHHH-HHhhhccchHHHHHHHhcC
Q 015168          165 SGVLDRAKCSQSCCRTSNEGPVPDADNIVDVGIEAIKLGWKEYMQQPVLPA-SLAYVLLC-LNVVLTPGSLMTAFLTQRG  242 (412)
Q Consensus       165 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~v~~~-~~~~a~l~-~t~v~~~~~~~~~y~~~~g  242 (412)
                      |+.. ++++           +  +        ..+..+.++ .+++|.+.. .+.....+ .. ...+......|.++.+
T Consensus       195 ~~~~-~~~~-----------~--~--------~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~  250 (408)
T PRK09874        195 ENFQ-PVSK-----------K--E--------MLHMREVVT-SLKNPKLVLSLFVTTLIIQVA-TGSIAPILTLYVRELA  250 (408)
T ss_pred             cCcc-cccc-----------h--h--------hhHHHHHHH-hCcCCchHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHh
Confidence            2110 0000           0  0        001122333 345655433 33322332 21 1233445666776643


Q ss_pred             CCCc----hhHHHhhHHHHHHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHHhcCCCcCcchHHHHHHHHHHh
Q 015168          243 LNPS----IIGGFSGLCASMGVAATFLSAYLVRRLGILKAGAAGLIFQASLLAMAVAVYWSGSLSQQNPLLFFLCLIVLS  318 (412)
Q Consensus       243 ls~~----~~G~~~~~~avggllGt~l~~~l~~R~g~~r~~~~~~~~~~~~l~~~v~~~~~g~~~~~~~~~l~~~g~~~s  318 (412)
                      .+..    ..|.+.+..+++++++....+++.+|+|+++....+..........   ......   .....+   ..++.
T Consensus       251 ~~~~~~~~~~g~~~~~~~l~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~---~~~~~~---~~~~~~---~~~~~  321 (408)
T PRK09874        251 GNVSNIAFISGMIASVPGVAALLSAPRLGKLGDRIGPEKILITALIFSVLLLIP---MSFVQT---PLQLGI---LRFLL  321 (408)
T ss_pred             ccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccchhHHHHHHHHHHHHHH---HHHhcc---HHHHHH---HHHHH
Confidence            3333    2466667778888899999999999999998887665432222111   111111   111111   11111


Q ss_pred             hhhhhhhhhhhhHHhhccCCcccchhHHHHHHHHHHHHHHHHHHHHHhccCCCchhHHHHHHHHHHHHHHHHHHHHhcC
Q 015168          319 RLGHMSYDIVGAQILQTGIPSSKANLIGTTEISVASLVESVMLGVAIIANDVSHFGFLATLSLLSVVGAAWMFCHWLLN  397 (412)
Q Consensus       319 r~GLw~~dl~~~~l~Q~~vp~~~~G~v~g~~~sl~~~~~ll~~~~~~~~~~~~~f~~l~~~s~~~v~~~~~~~~~~~~~  397 (412)
                      +++...+........|+..|++++|++.+.+++.++....+...++....+.........+..+..+.+.+....+.+|
T Consensus       322 g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~~gp~~~G~l~~~~g~~~~f~~~~~~~l~~~~~~~~~~~~  400 (408)
T PRK09874        322 GAADGALLPAVQTLLVYNSSNQIAGRIFSYNQSFRDIGNVTGPLMGAAISANYGFRAVFLVTAGVVLFNAVYSWNSLRR  400 (408)
T ss_pred             HhhhHhhHHHHHHHHHHhCCcccceeeehHHHHHHHHHHHhhHHHHHHHHhhcchhHHHHHHHHHHHHHHHHHHHHHHH
Confidence            2222224455666778888999999999999999988666666665555443333333333333333333333333344

>PRK10213 nepI ribonucleoside transporter; Reviewed

Probab=99.73  E-value=2.2e-14  Score=145.24  Aligned_cols=300  Identities=11%  Similarity=0.062  Sum_probs=178.0

Q ss_pred             hHHHHHHhhhhhcchhccCCcHHHHHHHHHHHHHHHHHHHHHHHHHhccccccccchhHHHHHHHHHHHHHHHHHhhhhh
Q 015168            5 SKLILIVGGPLVGKLMDHSPRIPAYICLNTVQAAAQLLSAAMIIHAHTVIPTSSSMLLHPWFFVLVLAGAVERLTGVALG   84 (412)
Q Consensus         5 ~~lp~ll~g~~~G~~vDr~~R~~v~~~~~~~q~~~v~~s~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~l~~~a~~   84 (412)
                      ..+...+.+++.|.+.||.+|||++..+++...+.    ..  ...+..       ..+.+++.-++.|...........
T Consensus        64 ~~~~~~~~~~~~g~l~Dr~grr~~~~~~~~~~~~~----~~--~~~~~~-------~~~~l~~~r~l~G~~~g~~~~~~~  130 (394)
T PRK10213         64 TAFVAMFASLFITQTIQATDRRYVVILFAVLLTLS----CL--LVSFAN-------SFSLLLIGRACLGLALGGFWAMSA  130 (394)
T ss_pred             HHHHHHHHHHHHHHHhcccCcHHHHHHHHHHHHHH----HH--HHHHHC-------hHHHHHHHHHHHHHhhHHHHHHHH
Confidence            35566788999999999999999999998866443    21  111211       113445554566666555444333


Q ss_pred             hhhcccceeeecCCCchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhcChhHHHHHHHHHHHHHHHHHHHHHHHhhhcc
Q 015168           85 VAVERDWAVLLAGINRPIALAKANAVLNRIDLLCEIAGASLFGILLSKYEPVTCLKFAAGLIMWSLPVMIILTWFTNKIS  164 (412)
Q Consensus        85 ~ai~RDwv~~l~~~~~~~~L~~~Ns~l~~id~v~~llgP~lgG~L~~~~~~~~~~~~~~~~~~~s~~~~~~~l~~~~~~~  164 (412)
                      . +..|    .++++   +..++|+.......++.++||.+++.+....||+..+++.+...++..      +....+.|
T Consensus       131 ~-~i~~----~~~~~---~~~~a~~~~~~~~~~g~~ig~~l~~~l~~~~gw~~~f~~~~~l~~~~~------l~~~~~~p  196 (394)
T PRK10213        131 S-LTMR----LVPPR---TVPKALSVIFGAVSIALVIAAPLGSFLGELIGWRNVFNAAAVMGVLCI------FWIIKSLP  196 (394)
T ss_pred             H-HHHH----HcCHh---HHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHH------HHHHHHCC
Confidence            3 3335    45543   789999999999999999999999999999999998876543332211      11222344


Q ss_pred             ccccccccccccccCCCCCCCCCCchhhhHHhHHHHHHhHHHHhcCCcchHHHHHHHHHHHhhhcc-chHHHHHHHhcCC
Q 015168          165 SGVLDRAKCSQSCCRTSNEGPVPDADNIVDVGIEAIKLGWKEYMQQPVLPASLAYVLLCLNVVLTP-GSLMTAFLTQRGL  243 (412)
Q Consensus       165 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~v~~~~~~~a~l~~t~v~~~-~~~~~~y~~~~gl  243 (412)
                      |+    +++.          + +.            .++++..+|||.++.......+.+.....+ ....+.|.+++|+
T Consensus       197 ~~----~~~~----------~-~~------------~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~g~  249 (394)
T PRK10213        197 SL----PGEP----------S-HQ------------KQNTFRLLQRPGVMAGMIAIFMSFAGQFAFFTYIRPVYMNLAGF  249 (394)
T ss_pred             CC----Cccc----------c-cc------------hhHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC
Confidence            31    0100          0 00            112345677887776433322221101111 2234667777899


Q ss_pred             CCchhHHHhhHHHHHHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHHhcCCCcCcchHHHHHHHHHHhhhhhh
Q 015168          244 NPSIIGGFSGLCASMGVAATFLSAYLVRRLGILKAGAAGLIFQASLLAMAVAVYWSGSLSQQNPLLFFLCLIVLSRLGHM  323 (412)
Q Consensus       244 s~~~~G~~~~~~avggllGt~l~~~l~~R~g~~r~~~~~~~~~~~~l~~~v~~~~~g~~~~~~~~~l~~~g~~~sr~GLw  323 (412)
                      ++...|......+++++.|+++.+++.+|.+ ++...++......+  .+.......+    .....  ...++.++|..
T Consensus       250 s~~~~g~~~~~~~~~~iig~~~~~~l~~r~~-~~~l~~~~~~~~~~--~~~l~~~~~~----~~~~~--~~~~l~G~~~~  320 (394)
T PRK10213        250 GVDGLTLVLLSFGIASFVGTSLSSFILKRSV-KLALAGAPLVLAVS--ALVLTLWGSD----KIVAT--GVAIIWGLTFA  320 (394)
T ss_pred             ChhHHHHHHHHHHHHHHHHHHHHHHHHhccc-hhHHHHHHHHHHHH--HHHHHHHhhh----HHHHH--HHHHHHHHHHH
Confidence            9999999999999999999999999999954 34333332221111  1111222211    11111  11222233444


Q ss_pred             hhhhhhhHHhhccCCcccchhHHHHHHHHHHHH-HHHHHHHHHhcc
Q 015168          324 SYDIVGAQILQTGIPSSKANLIGTTEISVASLV-ESVMLGVAIIAN  368 (412)
Q Consensus       324 ~~dl~~~~l~Q~~vp~~~~G~v~g~~~sl~~~~-~ll~~~~~~~~~  368 (412)
                      ..+...+...|+.+| ++++++++.+.+..++. .+...+.+.+..
T Consensus       321 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~lg~~~G~~l~G~l~~  365 (394)
T PRK10213        321 LVPVGWSTWITRSLA-DQAEKAGSIQVAVIQLANTCGAAIGGYALD  365 (394)
T ss_pred             hhhHHHHHHHHHHCc-ccHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence            577777878888887 55778888777776653 444444455544

>TIGR00893 2A0114 d-galactonate transporter

Probab=99.73  E-value=4.1e-15  Score=146.88  Aligned_cols=332  Identities=16%  Similarity=0.072  Sum_probs=185.0

Q ss_pred             hHHHHHHhhhhhcchhccCCcHHHHHHHHHHHHHHHHHHHHHHHHHhccccccccchhHHHHHHHHHHHHHHHHHhhhhh
Q 015168            5 SKLILIVGGPLVGKLMDHSPRIPAYICLNTVQAAAQLLSAAMIIHAHTVIPTSSSMLLHPWFFVLVLAGAVERLTGVALG   84 (412)
Q Consensus         5 ~~lp~ll~g~~~G~~vDr~~R~~v~~~~~~~q~~~v~~s~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~l~~~a~~   84 (412)
                      ..++..+..++.|.+.||++||+++..+.+...+.    ..  ...+...      . +.+++.-++.|........+..
T Consensus        38 ~~~~~~~~~~~~g~l~d~~g~r~~~~~~~~~~~~~----~~--~~~~~~~------~-~~~~~~~~l~g~~~~~~~~~~~  104 (399)
T TIGR00893        38 FSWGYVVGQFPGGWLLDRFGARKTLAVFIVIWGVF----TG--LQAFAGA------Y-VSLYILRVLLGAAEAPFFPGII  104 (399)
T ss_pred             HHHHHHHHHHhHHHHHHhcCcceeeHHHHHHHHHH----HH--HHHHHcC------H-HHHHHHHHHHHHHHHhhhhHHH
Confidence            45677888999999999999999988776544322    11  1111111      1 2334444455555544444433


Q ss_pred             hhhcccceeeecCCCchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhcChhHHHHHHHHHHHHHHHHHHHHHHHhhhcc
Q 015168           85 VAVERDWAVLLAGINRPIALAKANAVLNRIDLLCEIAGASLFGILLSKYEPVTCLKFAAGLIMWSLPVMIILTWFTNKIS  164 (412)
Q Consensus        85 ~ai~RDwv~~l~~~~~~~~L~~~Ns~l~~id~v~~llgP~lgG~L~~~~~~~~~~~~~~~~~~~s~~~~~~~l~~~~~~~  164 (412)
                      . +..|    .++++   +..+.++.......++.+++|.++|.+....+|+..+++.+....+....    .  ....+
T Consensus       105 ~-~~~~----~~~~~---~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~----~--~~~~~  170 (399)
T TIGR00893       105 L-IVAS----WFPAS---ERATAVSIFNSAQGLGGIIGGPLVGWILIHFSWQWAFIIEGVLGIIWGVL----W--LKFIP  170 (399)
T ss_pred             H-HHHH----hCCHH---HHHHHHHHHHHhchHHHHHHHHHHHHHHHhCCchHHHHHHHHHHHHHHHH----h--hheec
Confidence            3 2223    55543   78899999999999999999999999999999998876544333332211    1  11122


Q ss_pred             ccccccccccccccCCC-CCCCCCCchhhhHHhHHHHHHhHHHHhcCCcchHHHHHHHHHHHhhhccchHHHHHHH-hcC
Q 015168          165 SGVLDRAKCSQSCCRTS-NEGPVPDADNIVDVGIEAIKLGWKEYMQQPVLPASLAYVLLCLNVVLTPGSLMTAFLT-QRG  242 (412)
Q Consensus       165 ~~~l~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~v~~~~~~~a~l~~t~v~~~~~~~~~y~~-~~g  242 (412)
                      | ++++++..+++.++. .+....+.++  +...+...+.++..+++|.++..+....++......+....+.|++ +.|
T Consensus       171 ~-~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  247 (399)
T TIGR00893       171 D-PPQKAKWLTEEEKYIVVGGLLAEQQG--KGPSTPKKYQIKELLKDRRVWGLALGQFLVNIGLGFFLTWFPTYLVQERG  247 (399)
T ss_pred             C-CCCccccCCHHHHhhcchhhcccccc--ccccCCCccchHHHhcCHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHhc
Confidence            2 111111000000000 0000000000  0000111234566778887766444333331112333444666775 479


Q ss_pred             CCCchhHHHhhHHHHHHHHHHHHHHHHHHHhchhhHHHH-H-HHHHHHHHHHHHHHHhcCCCcCcchHHHHHHHHHHhhh
Q 015168          243 LNPSIIGGFSGLCASMGVAATFLSAYLVRRLGILKAGAA-G-LIFQASLLAMAVAVYWSGSLSQQNPLLFFLCLIVLSRL  320 (412)
Q Consensus       243 ls~~~~G~~~~~~avggllGt~l~~~l~~R~g~~r~~~~-~-~~~~~~~l~~~v~~~~~g~~~~~~~~~l~~~g~~~sr~  320 (412)
                      .++...|...+...++++++..+.+++.+|+|.++.... . ..........+......+..+  .. ............
T Consensus       248 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~-~~~~~~~~~~~~  324 (399)
T TIGR00893       248 LSILEAGFMASLPGIVGFIGMILGGRLSDLLLRRGKSLVFARKTAIIAGLVLSLLMFATNYVN--IP-YAALALVALGFF  324 (399)
T ss_pred             ccHHHhhHHHHHHHHHHHHHHHHHHHHHHHHhhcccchhHHHHHHHHHHHHHHHHHHHhccch--hH-HHHHHHHHHHHh
Confidence            999999999999999999999999999999999762111 1 111111111111122221100  11 111111111122


Q ss_pred             hhhhhhhhhhHHhhccCCcccchhHHHHHHHHHHHHHHHHHHHHHhccCC
Q 015168          321 GHMSYDIVGAQILQTGIPSSKANLIGTTEISVASLVESVMLGVAIIANDV  370 (412)
Q Consensus       321 GLw~~dl~~~~l~Q~~vp~~~~G~v~g~~~sl~~~~~ll~~~~~~~~~~~  370 (412)
                      +. ........+.+|.+|+++||++.|+.+..++....+...+.....+.
T Consensus       325 ~~-~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~~~~~i~g~l~~~  373 (399)
T TIGR00893       325 GL-GAGAIGWALISDNAPGNIAGLTGGLINSLGNLGGIVGPIVIGAIAAT  373 (399)
T ss_pred             ch-hhhhHHHHHHHhhcChhHHHHHHHHHHHHHHHhhhhhhHHhhhhccC
Confidence            22 24567778889999999999999999999988776666665555444

>PRK12307 putative sialic acid transporter; Provisional

Probab=99.73  E-value=7.6e-15  Score=149.00  Aligned_cols=320  Identities=12%  Similarity=0.062  Sum_probs=186.3

Q ss_pred             hHHHHHHhhhhhcchhccCCcHHHHHHHHHHHHHHHHHHHHHHHHHhccccccccchhHHHHHHHHHHHHHHHHHhhhhh
Q 015168            5 SKLILIVGGPLVGKLMDHSPRIPAYICLNTVQAAAQLLSAAMIIHAHTVIPTSSSMLLHPWFFVLVLAGAVERLTGVALG   84 (412)
Q Consensus         5 ~~lp~ll~g~~~G~~vDr~~R~~v~~~~~~~q~~~v~~s~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~l~~~a~~   84 (412)
                      ..++.++.+++.|.+.||++||+++..+.+...+....      ..+...      . +.+++.-++.|...........
T Consensus        62 ~~~~~~l~~~~~g~l~dr~g~r~~l~~~~~~~~~~~~~------~~~~~~------~-~~l~~~r~l~G~g~g~~~~~~~  128 (426)
T PRK12307         62 AFIGRPFGGALFGLLADKFGRKPLMMWSIVAYSVGTGL------SGLASG------V-IMLTLSRFIVGMGMAGEYACAS  128 (426)
T ss_pred             HHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHH------HHHHhH------H-HHHHHHHHHHHHHHhhHHHHHH
Confidence            45778889999999999999999998887655443221      111111      1 2344444455554443333322


Q ss_pred             hhhcccceeeecCCCchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhcChhHHHHHHHHHHHHHHHHHHHHHHHhhhcc
Q 015168           85 VAVERDWAVLLAGINRPIALAKANAVLNRIDLLCEIAGASLFGILLSKYEPVTCLKFAAGLIMWSLPVMIILTWFTNKIS  164 (412)
Q Consensus        85 ~ai~RDwv~~l~~~~~~~~L~~~Ns~l~~id~v~~llgP~lgG~L~~~~~~~~~~~~~~~~~~~s~~~~~~~l~~~~~~~  164 (412)
                      ..+ .|    ..+++   +..++++.......++.+++|.+++.+....+|+..+++..    ......   .....+.|
T Consensus       129 ~~~-~~----~~~~~---~r~~~~~~~~~~~~lg~~~~~~l~~~l~~~~~w~~~f~i~~----~~~~~~---~~~~~~~p  193 (426)
T PRK12307        129 TYA-VE----SWPKH---LKSKASAFLVSGFGIGNIIAAYFMPSFAEAYGWRAAFFVGL----LPVLLV---IYIRARAP  193 (426)
T ss_pred             HHH-HH----hCCHh---HhhHhhhHHHHHHhHHHHHHHHHHHHHcccCCHHHHHHHHH----HHHHHH---HHHHHHCC
Confidence            222 23    44543   67889999999999999999999999998899999876422    111111   11112333


Q ss_pred             ccccccccccccccCCCCCCCCCCchhhhHHhHHHHHHhHHHHhcCCcchHHHHHHHHHHHhhh---ccchHHHHHHHhc
Q 015168          165 SGVLDRAKCSQSCCRTSNEGPVPDADNIVDVGIEAIKLGWKEYMQQPVLPASLAYVLLCLNVVL---TPGSLMTAFLTQR  241 (412)
Q Consensus       165 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~v~~~~~~~a~l~~t~v~---~~~~~~~~y~~~~  241 (412)
                      |+. +.++++  . ++++++   +     +..+++..+.++..+++|.++........++....   ......+.|.++.
T Consensus       194 ~~~-~~~~~~--~-~~~~~~---~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  261 (426)
T PRK12307        194 ESK-EWEEAK--L-SGKGKH---S-----QSAWSVFSLSMKGLFNRAQFPLTLCVFIVLFSIFGANWPIFGLLPTYLAGE  261 (426)
T ss_pred             CCh-HHHHhh--h-hccccc---c-----ccchhhhhHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc
Confidence            321 100110  0 000000   0     01122234567888899887764332222211001   1233456677788


Q ss_pred             CCCCchhHHHhhHHHHHHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHHhcCCCcCcchHHHHHHHHHHhhhh
Q 015168          242 GLNPSIIGGFSGLCASMGVAATFLSAYLVRRLGILKAGAAGLIFQASLLAMAVAVYWSGSLSQQNPLLFFLCLIVLSRLG  321 (412)
Q Consensus       242 gls~~~~G~~~~~~avggllGt~l~~~l~~R~g~~r~~~~~~~~~~~~l~~~v~~~~~g~~~~~~~~~l~~~g~~~sr~G  321 (412)
                      |.++...+...+..+++++.|+.+.+++.+|+|+++....+.....+....  ....... . .........++.....|
T Consensus       262 g~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~--~~~~~~~-~-~~~~~~~~~~~~~~~~~  337 (426)
T PRK12307        262 GFDTGVVSNLMTAAAFGTVLGNIVWGLCADRIGLKKTFSIGLLMSFLFIFP--LFRIPQD-N-YLLLGACLFGLMATNVG  337 (426)
T ss_pred             CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHH--HHHHccc-c-HHHHHHHHHHHHHhccc
Confidence            999999999999999999999999999999999988877665433222111  1111111 0 11111112222111112


Q ss_pred             hhhhhhhhhHHhhccCCcccchhHHHHHHHHHHHHHHHHHHHHHhccCCC
Q 015168          322 HMSYDIVGAQILQTGIPSSKANLIGTTEISVASLVESVMLGVAIIANDVS  371 (412)
Q Consensus       322 Lw~~dl~~~~l~Q~~vp~~~~G~v~g~~~sl~~~~~ll~~~~~~~~~~~~  371 (412)
                      .   ........|+.+|++.||++.|...++.+....+.+.+.....+-.
T Consensus       338 ~---~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~~~~~gp~~~g~l~~~~  384 (426)
T PRK12307        338 V---GGLVPKFLYDYFPLEVRGLGTGLIYNLAATSGTFNSMAATWLGITM  384 (426)
T ss_pred             H---hHHHHHHHHHhCcHHHHhhhhhHHHHHHhHHHHHHHHHHHHHHHcc
Confidence            2   2233456789999999999999999999887766766655554433

>PRK05122 major facilitator superfamily transporter; Provisional

Probab=99.71  E-value=2.2e-14  Score=144.53  Aligned_cols=303  Identities=14%  Similarity=-0.009  Sum_probs=163.9

Q ss_pred             hhHHHHHHhhhhhcchhccCCcHHHHHHHHHHHHHHHHHHHHHHHHHhccccccccchhHHHHHHHHHHHHHHHHHhhhh
Q 015168            4 FSKLILIVGGPLVGKLMDHSPRIPAYICLNTVQAAAQLLSAAMIIHAHTVIPTSSSMLLHPWFFVLVLAGAVERLTGVAL   83 (412)
Q Consensus         4 ~~~lp~ll~g~~~G~~vDr~~R~~v~~~~~~~q~~~v~~s~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~l~~~a~   83 (412)
                      +..++..+++++.|.++||++|||++..+++...+.... +.  ...+...  +.-+..+.+++.-++.|........+.
T Consensus        59 ~~~~~~~i~~~~~G~l~Dr~g~r~~l~~~~~~~~~~~~~-~~--~~~~~~~--~~~~~~~~l~~~r~l~G~~~~~~~~~~  133 (399)
T PRK05122         59 LQYLATLLSRPHAGRYADTLGPKKAVVFGLCGCALSGLL-YL--LAGLLAA--WPVLSLLLLLLGRLLLGIGESLAGTGS  133 (399)
T ss_pred             HHHHHHHHhchhhHhHHhccCCcchHHHHHHHHHHHHHH-HH--Hhhhhhc--cchhHHHHHHHHHHHHHhhHHhhcchH
Confidence            456788899999999999999999999988755443111 11  1111110  000011123444456776666655554


Q ss_pred             hhhhcccceeeecCCCchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhcChhHHHHHHHHHHHHHHHHHHHHHHHhhhc
Q 015168           84 GVAVERDWAVLLAGINRPIALAKANAVLNRIDLLCEIAGASLFGILLSKYEPVTCLKFAAGLIMWSLPVMIILTWFTNKI  163 (412)
Q Consensus        84 ~~ai~RDwv~~l~~~~~~~~L~~~Ns~l~~id~v~~llgP~lgG~L~~~~~~~~~~~~~~~~~~~s~~~~~~~l~~~~~~  163 (412)
                      ...+. |    .++++   +..++++........+.++||.++|.+....+|+..+++.....++.+       ...++.
T Consensus       134 ~~~~~-~----~~~~~---~r~~~~~~~~~~~~~g~~~g~~l~~~l~~~~g~~~~~~~~~~~~~~~~-------~~~~~~  198 (399)
T PRK05122        134 ILWGI-G----RVGAL---HTGRVISWNGIATYGALAIGAPLGVLLYHWGGLAGLGLLIMLLALLGL-------LLARPR  198 (399)
T ss_pred             HHHHH-h----hcChh---hhccchhhhhhhhhHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHH-------HHHhcC
Confidence            33222 2    45543   678899988888888999999999999999999876554322211111       111122


Q ss_pred             cccccccccccccccCCCCCCCCCCchhhhHHhHHHHHHhHHHHhcCCcchHHHHHHHHHHHhhhccchHHHHHHHhcCC
Q 015168          164 SSGVLDRAKCSQSCCRTSNEGPVPDADNIVDVGIEAIKLGWKEYMQQPVLPASLAYVLLCLNVVLTPGSLMTAFLTQRGL  243 (412)
Q Consensus       164 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~v~~~~~~~a~l~~t~v~~~~~~~~~y~~~~gl  243 (412)
                      |++   ++++.             + +   .+    ..+.++.++++....  ......+    .........|.+++|.
T Consensus       199 ~~~---~~~~~-------------~-~---~~----~~~~~~~~~~~~~~~--~~~~~~~----~~~~~~~~~~~~~~~~  248 (399)
T PRK05122        199 PAV---PPVKG-------------E-R---LP----FRRVLGRVWPYGMGL--ALASIGF----GTIATFITLYYAARGW  248 (399)
T ss_pred             CCC---CCCCc-------------c-c---hh----HHHHHHHHHHHHHHH--HHHHHHH----HHHHHHHHHHHHHccc
Confidence            210   00000             0 0   00    112222222221111  0011111    1122234556666776


Q ss_pred             CCchhHHHhhHHHHHHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHHhcCCCcCcchHHHHHHHHHHhhhhhh
Q 015168          244 NPSIIGGFSGLCASMGVAATFLSAYLVRRLGILKAGAAGLIFQASLLAMAVAVYWSGSLSQQNPLLFFLCLIVLSRLGHM  323 (412)
Q Consensus       244 s~~~~G~~~~~~avggllGt~l~~~l~~R~g~~r~~~~~~~~~~~~l~~~v~~~~~g~~~~~~~~~l~~~g~~~sr~GLw  323 (412)
                      +.  .+...+..+++++.|.+..+++.+|+|.+|....+..........  ... ..+   ....+   .+.++.++|.-
T Consensus       249 ~~--~~~~~~~~~~~~~~~~~~~g~l~~r~~~~~~~~~~~~~~~~~~~~--~~~-~~~---~~~~~---~~~~l~G~~~~  317 (399)
T PRK05122        249 DG--AALALTLFGVAFVGARLLFGNLINRLGGLRVAIVSLLVEILGLLL--LWL-APS---PWMAL---IGAALTGFGFS  317 (399)
T ss_pred             cc--chHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHH--HHH-hcc---HHHHH---HHHHHHHHhHH
Confidence            43  466677888889999999999999999988776665432222111  111 111   01111   11122222322


Q ss_pred             hhhhhhhHHhhccCCcccchhHHHHHHHHHHHHHHH-HHHHHHhc
Q 015168          324 SYDIVGAQILQTGIPSSKANLIGTTEISVASLVESV-MLGVAIIA  367 (412)
Q Consensus       324 ~~dl~~~~l~Q~~vp~~~~G~v~g~~~sl~~~~~ll-~~~~~~~~  367 (412)
                      ..........++.+|+++||++.|+.++.++....+ ..+.+.+.
T Consensus       318 ~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~  362 (399)
T PRK05122        318 LVFPALGVEAVKRVPPQNRGAALGAYSVFLDLSLGITGPLAGLVA  362 (399)
T ss_pred             HHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            222344455667789999999999999988875443 33334333

>PRK11551 putative 3-hydroxyphenylpropionic transporter MhpT; Provisional

Probab=99.71  E-value=4.8e-14  Score=142.25  Aligned_cols=335  Identities=13%  Similarity=-0.033  Sum_probs=183.2

Q ss_pred             hHHHHHHhhhhhcchhccCCcHHHHHHHHHHHHHHHHHHHHHHHHHhccccccccchhHHHHHHHHHHHHHHHHHhhhhh
Q 015168            5 SKLILIVGGPLVGKLMDHSPRIPAYICLNTVQAAAQLLSAAMIIHAHTVIPTSSSMLLHPWFFVLVLAGAVERLTGVALG   84 (412)
Q Consensus         5 ~~lp~ll~g~~~G~~vDr~~R~~v~~~~~~~q~~~v~~s~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~l~~~a~~   84 (412)
                      ..+..++..++.|.+.||++|||++..+.+...+.    ..  ...+...      . +.+++..++.|.......... 
T Consensus        59 ~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~----~~--~~~~~~~------~-~~~~~~~~l~G~~~~~~~~~~-  124 (406)
T PRK11551         59 GILGLLPGALLGGRLADRIGRKRILIVSVALFGLF----SL--ATAQAWD------F-PSLLVARLLTGVGLGGALPNL-  124 (406)
T ss_pred             HHHHHHHHHHHHHHHHHHhCCchhHHHHHHHHHHH----HH--HHHHhcc------H-HHHHHHHHHHHhhHHHHHHHH-
Confidence            35667788899999999999999988876533221    11  1112211      1 233444445555444433332 


Q ss_pred             hhhcccceeeecCCCchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhcChhHHHHHHHHHHHHHHHHHHHHHHHhhhcc
Q 015168           85 VAVERDWAVLLAGINRPIALAKANAVLNRIDLLCEIAGASLFGILLSKYEPVTCLKFAAGLIMWSLPVMIILTWFTNKIS  164 (412)
Q Consensus        85 ~ai~RDwv~~l~~~~~~~~L~~~Ns~l~~id~v~~llgP~lgG~L~~~~~~~~~~~~~~~~~~~s~~~~~~~l~~~~~~~  164 (412)
                      .++..|    .++++   +..++++.......++.+++|.+++.+....+|+..+++.....+....      .....+|
T Consensus       125 ~~~~~~----~~~~~---~r~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~l~  191 (406)
T PRK11551        125 IALTSE----AVGPR---LRGTAVSLMYCGVPFGGALASVIGVLAAGDAAWRHIFYVGGVGPLLLVP------LLMRWLP  191 (406)
T ss_pred             HHHHHH----HcCHH---HHHHHHHHHHHHHHHHHHHHHHHHHHHccccCHHHHHHHHHHHHHHHHH------HHHHhCC
Confidence            233334    45533   6889999999999999999999999998888999887654332222221      1112234


Q ss_pred             ccccccccccccccCCCCCCCCCCchhhhHHhHHHHHHhHHHHhcCCc---chHH-HHHHHHHHHhhhccchHHHHHHHh
Q 015168          165 SGVLDRAKCSQSCCRTSNEGPVPDADNIVDVGIEAIKLGWKEYMQQPV---LPAS-LAYVLLCLNVVLTPGSLMTAFLTQ  240 (412)
Q Consensus       165 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~v---~~~~-~~~a~l~~t~v~~~~~~~~~y~~~  240 (412)
                      |+. +++++.  .  +    + .+ +   +...       +..++++.   .+.. ..+...+.. ........+.|.++
T Consensus       192 ~~~-~~~~~~--~--~----~-~~-~---~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~p~~~~~  249 (406)
T PRK11551        192 ESR-AFAQAA--G--A----G-KQ-R---APVL-------RALFGEGRATATLLLWISYFFTLIV-LYFLLNWLPSLLVG  249 (406)
T ss_pred             CCh-hHHhcc--C--c----c-hh-h---hhhH-------HHHhhhhhhhHHHHHHHHHHHHHHH-HHHHHHHHHHHHHh
Confidence            421 111000  0  0    0 00 0   0001       11111111   1111 111111111 11122235567778


Q ss_pred             cCCCCchhHHHhhHHHHHHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHHhcCCCcCcchHHHHHHHHHHhhh
Q 015168          241 RGLNPSIIGGFSGLCASMGVAATFLSAYLVRRLGILKAGAAGLIFQASLLAMAVAVYWSGSLSQQNPLLFFLCLIVLSRL  320 (412)
Q Consensus       241 ~gls~~~~G~~~~~~avggllGt~l~~~l~~R~g~~r~~~~~~~~~~~~l~~~v~~~~~g~~~~~~~~~l~~~g~~~sr~  320 (412)
                      +|+++...|...+...++++.|.++.+++.+|+|+++...+.......+...  ....+ .   .....+.   .+...+
T Consensus       250 ~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~--~~~~~-~---~~~~~~~---~~~~g~  320 (406)
T PRK11551        250 QGLSRSQAGLVQIAFNIGGALGSLLIGALMDRLRPRRVVLLIYAGILASLAA--LAAAP-S---FAGMLLA---GFAAGL  320 (406)
T ss_pred             CCCChhhhhHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHH--HHhcC-c---HHHHHHH---HHHHHH
Confidence            8999999999999999999999999999999999988876543322211111  11111 1   1111111   111121


Q ss_pred             hhhhhhhhhhHHhhccCCcccchhHHHHHHHHHHHHHHHHHHHHHh-ccCCCchhHHHHHHHHHHHHHHHHHHHHhcC
Q 015168          321 GHMSYDIVGAQILQTGIPSSKANLIGTTEISVASLVESVMLGVAII-ANDVSHFGFLATLSLLSVVGAAWMFCHWLLN  397 (412)
Q Consensus       321 GLw~~dl~~~~l~Q~~vp~~~~G~v~g~~~sl~~~~~ll~~~~~~~-~~~~~~f~~l~~~s~~~v~~~~~~~~~~~~~  397 (412)
                      +.-........+.++.+|+++||++.|..++..+....+...+... .......+....+...+...+..+.....+|
T Consensus       321 ~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~g~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  398 (406)
T PRK11551        321 FVVGGQSVLYALAPLFYPTQVRGTGVGAAVAVGRLGSMAGPLLAGQLLALGRSTVGVIGASIPVILVAALAALLLVSR  398 (406)
T ss_pred             HHHhHHHHHHHHHHHHcchhhhhhhhhHHHHhhhHHHHHHhhhHhhhhccCCchHHHHHHHHHHHHHHHHHHHHHhcc
Confidence            2212334455678899999999999999999999866666555444 4444445444444444444444444433343

>PRK12382 putative transporter; Provisional

Probab=99.71  E-value=2.3e-14  Score=144.12  Aligned_cols=305  Identities=13%  Similarity=-0.016  Sum_probs=164.7

Q ss_pred             hhHHHHHHhhhhhcchhccCCcHHHHHHHHHHHHHHHHHHHHHHHHHhccccccccchhHHHHHHHHHHHHHHHHHhhhh
Q 015168            4 FSKLILIVGGPLVGKLMDHSPRIPAYICLNTVQAAAQLLSAAMIIHAHTVIPTSSSMLLHPWFFVLVLAGAVERLTGVAL   83 (412)
Q Consensus         4 ~~~lp~ll~g~~~G~~vDr~~R~~v~~~~~~~q~~~v~~s~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~l~~~a~   83 (412)
                      +..++..++.++.|.++||++|||++..+.+...++... ..  ...........  ..+.+++.-++.|........+.
T Consensus        59 ~~~~~~~i~~~~~G~l~Dr~g~r~~l~~~~~~~~~~~~~-~~--~~~~~~~~~~~--~~~~l~~~r~l~G~~~~~~~~~~  133 (392)
T PRK12382         59 IQFLATVLTRGYAGRLADQYGAKRSALQGMLACGLAGLA-YL--LAAILPVSAPF--KFALLVVGRLILGFGESQLLTGA  133 (392)
T ss_pred             HHHHHHHHHhhhhhHHHHhhcchHHHHHHHHHHHHHHHH-HH--hhhccccchhH--HHHHHHHHHHHHHHHHHHHHHHH
Confidence            346778899999999999999999988887644322110 10  10011100000  11223444445665555444433


Q ss_pred             hhhhcccceeeecCCCchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhcChhHHHHHHHHHHHHHHHHHHHHHHHhhhc
Q 015168           84 GVAVERDWAVLLAGINRPIALAKANAVLNRIDLLCEIAGASLFGILLSKYEPVTCLKFAAGLIMWSLPVMIILTWFTNKI  163 (412)
Q Consensus        84 ~~ai~RDwv~~l~~~~~~~~L~~~Ns~l~~id~v~~llgP~lgG~L~~~~~~~~~~~~~~~~~~~s~~~~~~~l~~~~~~  163 (412)
                      .. ...|    .++++   +..++++........+..+||.++|.+....||+..+.+.....+..       ....++.
T Consensus       134 ~~-~~~~----~~~~~---~r~~a~~~~~~~~~~g~~~g~~~~~~l~~~~g~~~~~~~~~~~~~~~-------~~~~~~~  198 (392)
T PRK12382        134 LT-WGLG----LVGPK---HSGKVMSWNGMAMYGALAAGAPLGLLLHSHFGFAALALTTMVLPLLA-------WAFNGTV  198 (392)
T ss_pred             HH-HHHh----hCCcc---ccchhhhHHHHHHHHHHHHHHHHHHHHHhccChHHHHHHHHHHHHHH-------HHHHHhc
Confidence            22 2223    45543   68889999988888999999999999999899986543322111111       1111222


Q ss_pred             cccccccccccccccCCCCCCCCCCchhhhHHhHHHHHHhHHHHhcCCcchHHHHHHHHHHHhhhccchHHHHHHHhcCC
Q 015168          164 SSGVLDRAKCSQSCCRTSNEGPVPDADNIVDVGIEAIKLGWKEYMQQPVLPASLAYVLLCLNVVLTPGSLMTAFLTQRGL  243 (412)
Q Consensus       164 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~v~~~~~~~a~l~~t~v~~~~~~~~~y~~~~gl  243 (412)
                      ||++   ++++          .++       +    .++.++..++.. +. .+.....+.    ........|.++.|.
T Consensus       199 ~~~~---~~~~----------~~~-------~----~~~~~~~~~~~~-~~-~~l~~~~~~----~~~~~~~~~~~~~~~  248 (392)
T PRK12382        199 RKVP---AHAG----------ERP-------S----LWSVVGLIWKPG-LG-LALQGVGFA----VIGTFVSLYFASKGW  248 (392)
T ss_pred             cCCC---CCcc----------cCc-------h----HHHHHHHHHHhH-HH-HHHHHHHHh----HHHHHHHHHHHhcCC
Confidence            3210   0000          000       0    112233333321 11 111111111    111224456777777


Q ss_pred             CCchhHHHhhHHHHHHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHHhcCCCcCcchHHHHHHHHHHhhhhhh
Q 015168          244 NPSIIGGFSGLCASMGVAATFLSAYLVRRLGILKAGAAGLIFQASLLAMAVAVYWSGSLSQQNPLLFFLCLIVLSRLGHM  323 (412)
Q Consensus       244 s~~~~G~~~~~~avggllGt~l~~~l~~R~g~~r~~~~~~~~~~~~l~~~v~~~~~g~~~~~~~~~l~~~g~~~sr~GLw  323 (412)
                      ++  .+......+++.+.+....+++.+|+|.+|....+.....+....  ... .++    .....  .+.++..++.-
T Consensus       249 ~~--~~~~~~~~~~~~~~~~~~~g~l~~r~g~~~~~~~~~~~~~~~~~~--~~~-~~~----~~~~~--~~~~l~g~~~~  317 (392)
T PRK12382        249 AM--AGFTLTAFGGAFVLMRVLFGWMPDRFGGVKVAIVSLLVETVGLLL--LWL-APT----AWVAL--AGAALTGAGCS  317 (392)
T ss_pred             ch--hHHHHHHHHHHHHHHHHHHHHHHHhcCCCeehHHHHHHHHHHHHH--HHH-ccc----HHHHH--HHHHHHHHHHH
Confidence            65  455667778888999999999999999998887766543332221  111 111    11111  11112222221


Q ss_pred             hhhhhhhHHhhccCCcccchhHHHHHHHHHHHHHHHHHHHHHhccC
Q 015168          324 SYDIVGAQILQTGIPSSKANLIGTTEISVASLVESVMLGVAIIAND  369 (412)
Q Consensus       324 ~~dl~~~~l~Q~~vp~~~~G~v~g~~~sl~~~~~ll~~~~~~~~~~  369 (412)
                      ..........++..|+++||+++|+.++..+....+...+.....+
T Consensus       318 ~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~ig~~~~g~l~~  363 (392)
T PRK12382        318 LIFPALGVEVVKRVPSQVRGTALGGYAAFQDIAYGVSGPLAGMLAT  363 (392)
T ss_pred             hHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            2223455566777899999999999999988765555555444433

>PRK10473 multidrug efflux system protein MdtL; Provisional

Probab=99.70  E-value=7.7e-14  Score=140.32  Aligned_cols=229  Identities=15%  Similarity=0.083  Sum_probs=136.3

Q ss_pred             HHHHHHhhhhhcchhccCCcHHHHHHHHHHHHHHHHHHHHHHHHHhccccccccchhHHHHHHHHHHHHHHHHHhhhhhh
Q 015168            6 KLILIVGGPLVGKLMDHSPRIPAYICLNTVQAAAQLLSAAMIIHAHTVIPTSSSMLLHPWFFVLVLAGAVERLTGVALGV   85 (412)
Q Consensus         6 ~lp~ll~g~~~G~~vDr~~R~~v~~~~~~~q~~~v~~s~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~l~~~a~~~   85 (412)
                      .++.++..++.|.+.||++|||++..+.+.-.+    ++.  ......+      . +.+++.-++.|.......... .
T Consensus        48 ~~~~~~~~~~~G~l~Dr~g~r~~l~~~~~~~~i----~~~--~~~~~~~------~-~~~~~~~~l~g~~~~~~~~~~-~  113 (392)
T PRK10473         48 LAGMAAAMLFAGKIADRSGRKPVAIPGAALFII----ASL--LCSLAET------S-SLFLAGRFLQGIGAGCCYVVA-F  113 (392)
T ss_pred             HHHHHHHHHhHhHHHHHhCChHHHHHHHHHHHH----HHH--HHHHhCc------H-HHHHHHHHHHHhhhhHHHHHH-H
Confidence            456677889999999999999998776543222    121  1111111      1 123333344454444333322 2


Q ss_pred             hhcccceeeecCCCchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhcChhHHHHHHHHHHHHHHHHHHHHHHHhhhccc
Q 015168           86 AVERDWAVLLAGINRPIALAKANAVLNRIDLLCEIAGASLFGILLSKYEPVTCLKFAAGLIMWSLPVMIILTWFTNKISS  165 (412)
Q Consensus        86 ai~RDwv~~l~~~~~~~~L~~~Ns~l~~id~v~~llgP~lgG~L~~~~~~~~~~~~~~~~~~~s~~~~~~~l~~~~~~~~  165 (412)
                      ++.+|    .++++   +..+.++.......++.+++|.+++.+.+..+|+..+++.+....+....      ....++|
T Consensus       114 ~~i~~----~~~~~---~r~~~~~~~~~~~~i~~~~~~~i~~~l~~~~g~~~~~~~~~~~~~i~~~~------~~~~~~~  180 (392)
T PRK10473        114 AILRD----TLDDR---RRAKVLSLLNGITCIIPVLAPVLGHLIMLKFPWQSLFYTMAAMGILVLLL------SLFILKE  180 (392)
T ss_pred             HHHHH----HcCHH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcChHHHHHHHHHHHHHHHHH------HHHHcCC
Confidence            23334    45543   78899999999999999999999999988889998876654433333211      1122333


Q ss_pred             cccccccccccccCCCCCCCCCCchhhhHHhHHHHHHhHHHHhcCCcchHHHHHHHHHHHhhhccchHHHHHH-HhcCCC
Q 015168          166 GVLDRAKCSQSCCRTSNEGPVPDADNIVDVGIEAIKLGWKEYMQQPVLPASLAYVLLCLNVVLTPGSLMTAFL-TQRGLN  244 (412)
Q Consensus       166 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~v~~~~~~~a~l~~t~v~~~~~~~~~y~-~~~gls  244 (412)
                      +.. + +++          +  + .    .    ..+..+..++||.++.......+.......+....+.|. +++|++
T Consensus       181 ~~~-~-~~~----------~--~-~----~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~  237 (392)
T PRK10473        181 TRP-A-RAP----------A--A-S----S----KPRENSESLLNRFFLSRLVITTLSVTVILTFVNTSPVLLMEQMGFS  237 (392)
T ss_pred             CCC-c-ccC----------C--c-c----c----hHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHcCCC
Confidence            111 0 000          0  0 0    0    012233456777665533322222110111222223344 468999


Q ss_pred             CchhHHHhhHHHHHHHHHHHHHHHHHHHhchhhHHHHHHH
Q 015168          245 PSIIGGFSGLCASMGVAATFLSAYLVRRLGILKAGAAGLI  284 (412)
Q Consensus       245 ~~~~G~~~~~~avggllGt~l~~~l~~R~g~~r~~~~~~~  284 (412)
                      +..+|.+....+++++++.++.+++.+|+|.++...++..
T Consensus       238 ~~~~~~~~~~~~~~~i~~~~~~~~l~~r~g~~~~~~~~~~  277 (392)
T PRK10473        238 RGEYAIIMALTAGVSMTVSFSTPFALGIFKPRTLMLTSQV  277 (392)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHH
Confidence            9999999999999999999999999999999888776654

>PRK11128 putative 3-phenylpropionic acid transporter; Provisional

Probab=99.68  E-value=6.6e-14  Score=140.74  Aligned_cols=293  Identities=13%  Similarity=0.062  Sum_probs=167.1

Q ss_pred             hHHHHHHhhhhhcchhccCCcHHHH-HHHHHHHHHHHHHHHHHHHHHhccccccccchhHHHHHHHHHHHHHHHHHhhhh
Q 015168            5 SKLILIVGGPLVGKLMDHSPRIPAY-ICLNTVQAAAQLLSAAMIIHAHTVIPTSSSMLLHPWFFVLVLAGAVERLTGVAL   83 (412)
Q Consensus         5 ~~lp~ll~g~~~G~~vDr~~R~~v~-~~~~~~q~~~v~~s~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~l~~~a~   83 (412)
                      ..++..+.++..|.++||.+|++.. +...+   ...+   ..+.......      ..+.+++...+.+........+.
T Consensus        48 ~~l~~~l~~~~~g~l~dr~g~~~~~~~~~~~---~~~~---~~~~~~~~~~------~~~~l~i~~~l~g~~~~~~~~~~  115 (382)
T PRK11128         48 GLVARFLGSLLIAPRVKDPSQLIPALRLLAL---LTLL---FAVAFWFGAH------SFWLLFVAIGLFNLFFSPLVPLT  115 (382)
T ss_pred             HHHHHHhhhHHHHHHHhhhcchHHHHHHHHH---HHHH---HHHHHHHhcc------cHHHHHHHHHHHHHHHcccccHH
Confidence            3567788899999999999985321 11111   1111   1111111111      11333443344454443333333


Q ss_pred             hhhhcccceeeecCCCchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhcChhHHHHHHHHHHHHHHHHHHHHHHHhhhc
Q 015168           84 GVAVERDWAVLLAGINRPIALAKANAVLNRIDLLCEIAGASLFGILLSKYEPVTCLKFAAGLIMWSLPVMIILTWFTNKI  163 (412)
Q Consensus        84 ~~ai~RDwv~~l~~~~~~~~L~~~Ns~l~~id~v~~llgP~lgG~L~~~~~~~~~~~~~~~~~~~s~~~~~~~l~~~~~~  163 (412)
                      . ++..||     .+    +..+.+++.+....++..+||.++|.+.+..||+..+++.+....+..      +.. ...
T Consensus       116 ~-a~~~~~-----~~----~~~~a~~~~~~~~~lg~~igp~lgg~l~~~~g~~~~f~~~~~~~~~~~------~~~-~~~  178 (382)
T PRK11128        116 D-ALANTW-----QK----QIGLDYGKVRLWGSIAFVIGSALTGKLVSWFGEQAILWILTAGVASML------LGQ-LLR  178 (382)
T ss_pred             H-HHHHHH-----Hh----hccCCcchHHHHHHHHHHHHHHHHHHHHHHcChhHHHHHHHHHHHHHH------HHH-Hcc
Confidence            2 233354     11    355677778888889999999999999999999988765443222111      111 122


Q ss_pred             cccccccccccccccCCCCCCCCCCchhhhHHhHHHHHHhHHHHhcCCcchHHHHHHHHHHHhhhccchHHHHHHHhcCC
Q 015168          164 SSGVLDRAKCSQSCCRTSNEGPVPDADNIVDVGIEAIKLGWKEYMQQPVLPASLAYVLLCLNVVLTPGSLMTAFLTQRGL  243 (412)
Q Consensus       164 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~v~~~~~~~a~l~~t~v~~~~~~~~~y~~~~gl  243 (412)
                      ||+.+ ++++      +   ++  .         ++..++++..+|||.++..+....++......+.+..+.|+++.|.
T Consensus       179 ~~~~~-~~~~------~---~~--~---------~~~~~~~~~i~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~g~  237 (382)
T PRK11128        179 PTIMP-QGES------R---QQ--E---------SAGWPAWKALLKEPTVWRFLLCVSLLQGSHAAYYGFSAIYWQAAGY  237 (382)
T ss_pred             CCCCC-cccc------c---cc--c---------ccccchHHHHHcChhHHHHHHHHHHHHHHhHhHHHHHHHHHHHCCC
Confidence            33111 0000      0   00  0         0112467889999988875444333311112344556778888999


Q ss_pred             CCchhHHHhhHHHHHHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHHhcCCCcCcchHHHHHHHHHHhhhhhh
Q 015168          244 NPSIIGGFSGLCASMGVAATFLSAYLVRRLGILKAGAAGLIFQASLLAMAVAVYWSGSLSQQNPLLFFLCLIVLSRLGHM  323 (412)
Q Consensus       244 s~~~~G~~~~~~avggllGt~l~~~l~~R~g~~r~~~~~~~~~~~~l~~~v~~~~~g~~~~~~~~~l~~~g~~~sr~GLw  323 (412)
                      ++..+|.+.+.+.++.+.+.+..+++.+|+|.++....+.....+....  ... .+.    ...  +....++.+++.-
T Consensus       238 s~~~~g~~~~~~~~~~~~~~~~~g~l~~r~~~~~~l~~~~~~~~~~~~~--~~~-~~~----~~~--~~~~~~l~g~~~~  308 (382)
T PRK11128        238 SASTIGYLWSLGVVAEVLIFAFSNRLFRRWSARDLLLLSAICGVVRWGL--MGS-TTA----LPW--LIVIQILHCGTFT  308 (382)
T ss_pred             CHhHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH--HHh-hhh----HHH--HHHHHHHHHHHHH
Confidence            9999999999999999999999999999999999877665432222111  111 111    111  1112222233332


Q ss_pred             hhhhhhhHHhhccCCcccchhHHHHHHHHHHHHH
Q 015168          324 SYDIVGAQILQTGIPSSKANLIGTTEISVASLVE  357 (412)
Q Consensus       324 ~~dl~~~~l~Q~~vp~~~~G~v~g~~~sl~~~~~  357 (412)
                      .+......+.|+. +++++|++.+..+++++..+
T Consensus       309 ~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~g  341 (382)
T PRK11128        309 VCHLAAMRYIAAR-PGSEVIRLQALYSALAMGGS  341 (382)
T ss_pred             HHHHHHHHHHHHC-CHhhhHHHHHHHHHHHHHHH
Confidence            3556667777775 67777999998887766543

>PRK10091 MFS transport protein AraJ; Provisional

Probab=99.68  E-value=1.6e-13  Score=138.03  Aligned_cols=328  Identities=12%  Similarity=0.052  Sum_probs=178.9

Q ss_pred             hHHHHHHhhhhhcchhccCCcHHHHHHHHHHHHHHHHHHHHHHHHHhccccccccchhHHHHHHHHHHHHHHHHHhhhhh
Q 015168            5 SKLILIVGGPLVGKLMDHSPRIPAYICLNTVQAAAQLLSAAMIIHAHTVIPTSSSMLLHPWFFVLVLAGAVERLTGVALG   84 (412)
Q Consensus         5 ~~lp~ll~g~~~G~~vDr~~R~~v~~~~~~~q~~~v~~s~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~l~~~a~~   84 (412)
                      ..+..++..++.|.+.||++|||++..+.+...+...      ...+...      . +.+++.-++.|...........
T Consensus        47 ~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~------l~~~~~~------~-~~l~~~r~l~G~~~~~~~~~~~  113 (382)
T PRK10091         47 YALGVVVGAPIIALFSSRYSLKHILLFLVALCVIGNA------MFTLSSS------Y-LMLAIGRLVSGFPHGAFFGVGA  113 (382)
T ss_pred             HHHHHHHHHHHHHHHHccCccHHHHHHHHHHHHHHHH------HHHHhCc------H-HHHHHHHHHHHhhhHHHHHHHH
Confidence            3567788899999999999999998888765433221      1112211      1 3344444455554443333332


Q ss_pred             hhhcccceeeecCCCchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhcChhHHHHHHHHHHHHHHHHHHHHHHHhhhcc
Q 015168           85 VAVERDWAVLLAGINRPIALAKANAVLNRIDLLCEIAGASLFGILLSKYEPVTCLKFAAGLIMWSLPVMIILTWFTNKIS  164 (412)
Q Consensus        85 ~ai~RDwv~~l~~~~~~~~L~~~Ns~l~~id~v~~llgP~lgG~L~~~~~~~~~~~~~~~~~~~s~~~~~~~l~~~~~~~  164 (412)
                      . +..|    .++++   +..+.++.......++..+||.++|.+.+..+|+.++++......+...      ...+++|
T Consensus       114 ~-~~~~----~~~~~---~~~~~~~~~~~~~~~g~~~g~~l~~~l~~~~gwr~~f~~~~~~~~~~~~------~~~~~lp  179 (382)
T PRK10091        114 I-VLSK----IIKPG---KVTAAVAGMVSGMTVANLLGIPLGTYLSQEFSWRYTFLLIAVFNIAVLA------SIYFWVP  179 (382)
T ss_pred             H-HHHH----hCChH---HhhHHHHHHHHHHHHHHHHhccHHHHHhhhccHHHHHHHHHHHHHHHHH------HHHHhCC
Confidence            2 2334    45543   5778899888888999999999999999989999988765443333221      1122344


Q ss_pred             ccccccccccccccCCCCCCCCCCchhhhHHhHHHHHHhHHHHhcCCcchHHHHHHHH-HHHhhhccchHHHHHHH-hcC
Q 015168          165 SGVLDRAKCSQSCCRTSNEGPVPDADNIVDVGIEAIKLGWKEYMQQPVLPASLAYVLL-CLNVVLTPGSLMTAFLT-QRG  242 (412)
Q Consensus       165 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~v~~~~~~~a~l-~~t~v~~~~~~~~~y~~-~~g  242 (412)
                      |.   + ++.          + .+           .++.++ ..|+|..+..+....+ +.. ...+.+....|.+ ..|
T Consensus       180 ~~---~-~~~----------~-~~-----------~~~~~~-~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~g  231 (382)
T PRK10091        180 DI---R-DEA----------K-GG-----------LREQFH-FLRSPAPWLIFAATMFGNAG-VFAWFSYIKPYMMFISG  231 (382)
T ss_pred             CC---C-ccc----------c-cC-----------HHHHHH-HhcChHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHhcC
Confidence            41   1 110          0 00           012233 2345544432222111 111 1111122234554 589


Q ss_pred             CCCchhHHHhhHHHHHHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHHhcCCCcCcchHHHHHHHHHHhhhhh
Q 015168          243 LNPSIIGGFSGLCASMGVAATFLSAYLVRRLGILKAGAAGLIFQASLLAMAVAVYWSGSLSQQNPLLFFLCLIVLSRLGH  322 (412)
Q Consensus       243 ls~~~~G~~~~~~avggllGt~l~~~l~~R~g~~r~~~~~~~~~~~~l~~~v~~~~~g~~~~~~~~~l~~~g~~~sr~GL  322 (412)
                      .++...|++....++++++|.++.+++.+|+|.++...++.....+.....  ......    ....+.  ...+...|.
T Consensus       232 ~s~~~~~~~~~~~~~~~~ig~~~~g~l~~r~~~~~~~~~~~~~~~i~~~~~--~~~~~~----~~~~~~--~~~~~~~g~  303 (382)
T PRK10091        232 FSETSMTFIMMLVGLGMVLGNLLSGRLSGRYSPLRIAAVTDFIIVLALLML--FFFGGM----KTASLI--FAFICCAGL  303 (382)
T ss_pred             CCHHHHHHHHHHHHHHHHHHhHHHheeccccCchhHHHHHHHHHHHHHHHH--HHHHhh----HHHHHH--HHHHHHHHH
Confidence            999999999999999999999999999999999888776655433222111  111111    111111  111122233


Q ss_pred             hhhh-hhhhHHhhccCCcccchhHHHHHHHHHHH-HHHHHHHHHHhccCCCchhHHHHHHHHHHHHHHHHHHHHhcC
Q 015168          323 MSYD-IVGAQILQTGIPSSKANLIGTTEISVASL-VESVMLGVAIIANDVSHFGFLATLSLLSVVGAAWMFCHWLLN  397 (412)
Q Consensus       323 w~~d-l~~~~l~Q~~vp~~~~G~v~g~~~sl~~~-~~ll~~~~~~~~~~~~~f~~l~~~s~~~v~~~~~~~~~~~~~  397 (412)
                      .... .......|+..|++++|+.++  ++..+. ..+.....+.+......+......+......+......+.++
T Consensus       304 ~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~g~~~Gp~~~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  378 (382)
T PRK10091        304 FALSAPLQILLLQNAKGGELLGAAGG--QIAFNLGSAIGAYCGGMMLTLGLAYNYVALPAALLSFAAMSSLLLYGRY  378 (382)
T ss_pred             HhhhHHHHHHHHHhCCcchHHHHHHH--HHHHHHHHHHHHHHhHHHHHcccCcchHHHHHHHHHHHHHHHHHHHhhh
Confidence            2222 223345666667777877654  333344 333344444445434445555555544444444444455444

>TIGR00897 2A0118 polyol permease family

Probab=99.67  E-value=4.2e-13  Score=135.92  Aligned_cols=324  Identities=9%  Similarity=0.022  Sum_probs=174.6

Q ss_pred             hHHHHHHhhhhhcchhccCCcHHHHHHHHHHHHHHHHHHHHHHHHHhccccccccchhHHHHHHHHHHHHHHHHHhhhhh
Q 015168            5 SKLILIVGGPLVGKLMDHSPRIPAYICLNTVQAAAQLLSAAMIIHAHTVIPTSSSMLLHPWFFVLVLAGAVERLTGVALG   84 (412)
Q Consensus         5 ~~lp~ll~g~~~G~~vDr~~R~~v~~~~~~~q~~~v~~s~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~l~~~a~~   84 (412)
                      ..+...++.++.|.+.||++|||++..+.+...+...+    .. ......  .  ..+.++..-++.|..........+
T Consensus        57 ~~~~~~i~~~~~g~l~dr~g~k~~l~~~~~~~~~~~~~----~~-~~~~~~--~--~~~~l~~~~~i~G~g~~~~~~~~~  127 (402)
T TIGR00897        57 YGIAAAISAWISGVVAEIIGPLKTMMIGLLLWCVGHAA----FI-VFGLGH--A--NYPLILLFYGIRGLGYPLFAYSFL  127 (402)
T ss_pred             HHHHHHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHH----HH-HHhccC--c--cHHHHHHHHHHHHcchHHHHhHHH
Confidence            35677889999999999999999998887654332111    01 111110  0  112233333333333222222222


Q ss_pred             hhhcccceeeecCCCchhhhHHHHHHHHHHHHHHH-HHHHHHHHHHHhhcChhHHHHHHHHHHHHHHHHHHHHHHHhhhc
Q 015168           85 VAVERDWAVLLAGINRPIALAKANAVLNRIDLLCE-IAGASLFGILLSKYEPVTCLKFAAGLIMWSLPVMIILTWFTNKI  163 (412)
Q Consensus        85 ~ai~RDwv~~l~~~~~~~~L~~~Ns~l~~id~v~~-llgP~lgG~L~~~~~~~~~~~~~~~~~~~s~~~~~~~l~~~~~~  163 (412)
                      . ...|    .++++   +..++|+.......++. +.||.++|.+....||+..++...........    ....+  .
T Consensus       128 ~-~~~~----~~~~~---~~g~~~g~~~~~~~~g~~~~g~~~~~~l~~~~g~~~~~~~~~~~~~~~~~----~~~~~--~  193 (402)
T TIGR00897       128 V-WVVY----NTKQD---NLSSAVGWFWAVYSIGIGVFGSYYSSYAIPAFGEMNTLWSALAFVLTGGV----IALFS--N  193 (402)
T ss_pred             H-HHHH----hCCHH---HHHHHHHHHHHHHHHHHHHHHHHHHHhcccccchHHHHHHHHHHHHHHHH----HHHhc--c
Confidence            2 1222    44433   78999999999988886 68999999999888866554432221111111    01111  1


Q ss_pred             cccccccccccccccCCCCCCCCCCchhhhHHhHHHHHHhHHHHhcCCcchHHHHHHHHH-HHhhhccchHHHHHHHhcC
Q 015168          164 SSGVLDRAKCSQSCCRTSNEGPVPDADNIVDVGIEAIKLGWKEYMQQPVLPASLAYVLLC-LNVVLTPGSLMTAFLTQRG  242 (412)
Q Consensus       164 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~v~~~~~~~a~l~-~t~v~~~~~~~~~y~~~~g  242 (412)
                      ++ .+ ++++.     +       + +    ...++..++++..+++|.++......... .. ...+....+.|.+++|
T Consensus       194 ~~-~~-~~~~~-----~-------~-~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~p~~~~~~g  253 (402)
T TIGR00897       194 KD-IF-TPQHM-----Q-------T-R----EKFSELGKAATILFTNPNVLLGGMVRIINTIG-LFGFAVFLPMFVAELG  253 (402)
T ss_pred             CC-CC-Ccccc-----c-------C-C----cchhhHHHHHHHHHcChhHHHHHHHHHHHHHH-HHHHHHHHHHHHHHcC
Confidence            11 00 00000     0       0 0    01233456788899999887644322222 11 1223334567888899


Q ss_pred             CCCchhHHHhhHHHHHHHHHHHHHHHHHHHhchhhHHHH-HHHHHHHHHHHHHHHHhcCC-CcCcchH--HHHHHHHHHh
Q 015168          243 LNPSIIGGFSGLCASMGVAATFLSAYLVRRLGILKAGAA-GLIFQASLLAMAVAVYWSGS-LSQQNPL--LFFLCLIVLS  318 (412)
Q Consensus       243 ls~~~~G~~~~~~avggllGt~l~~~l~~R~g~~r~~~~-~~~~~~~~l~~~v~~~~~g~-~~~~~~~--~l~~~g~~~s  318 (412)
                      +++...+...+...++++.|+...+++.+|+|+++...+ +.....++.. +. ...+.. .......  ..+..|+   
T Consensus       254 ~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~~~~~~~l~~~~~~~-~l-~~~~~~~~~~~~~~~~~~~~~G~---  328 (402)
T TIGR00897       254 FSTSEWLQIWGTFFFTNIVFNVIFGIVGDKLGWMNTVRWFGGVGCGIFTL-AL-YYIPQHFGHSFAVALIIAIALGI---  328 (402)
T ss_pred             CChhHHHHHHHHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHHHH-HH-HHHHHccCCcHHHHHHHHHHHHH---
Confidence            999999999999999999999999999999998776532 2221111111 11 111100 0001111  1112222   


Q ss_pred             hhhhhhhhhhhhHHhhccCCcccchhHHHHHHHHHHHHHHHHHHHH-HhccCCCchhHHHHHH
Q 015168          319 RLGHMSYDIVGAQILQTGIPSSKANLIGTTEISVASLVESVMLGVA-IIANDVSHFGFLATLS  380 (412)
Q Consensus       319 r~GLw~~dl~~~~l~Q~~vp~~~~G~v~g~~~sl~~~~~ll~~~~~-~~~~~~~~f~~l~~~s  380 (412)
                        +.... .......++ ++|++||++.|+.++..+....+.+.+. .+....+.....++.+
T Consensus       329 --~~~~~-~~~~~~~~~-~~~~~~g~~~g~~~~~~~lg~~~gp~i~g~l~~~~g~~~~~~~~a  387 (402)
T TIGR00897       329 --FLAGY-VPLAAVFPT-LAPKHKGAAMSVLNLSAGLSAFLAPAIAVLFIGFFGAIGVVWIFA  387 (402)
T ss_pred             --HHHHH-HHHHHHHHh-hCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhcchHHHHHHHH
Confidence              22111 223445555 4567899999999999887665555544 3433333333333333

This family of proteins includes the ribitol and D-arabinitol transporters from Klebsiella pneumoniae and the alpha-ketoglutarate permease from Bacillus subtilis.

>TIGR00891 2A0112 putative sialic acid transporter

Probab=99.66  E-value=5.9e-14  Score=140.31  Aligned_cols=326  Identities=11%  Similarity=0.067  Sum_probs=172.2

Q ss_pred             hHHHHHHhhhhhcchhccCCcHHHHHHHHHHHHHHHHHHHHHHHHHhccccccccchhHHHHHHHHHHHHHHHHHhhhhh
Q 015168            5 SKLILIVGGPLVGKLMDHSPRIPAYICLNTVQAAAQLLSAAMIIHAHTVIPTSSSMLLHPWFFVLVLAGAVERLTGVALG   84 (412)
Q Consensus         5 ~~lp~ll~g~~~G~~vDr~~R~~v~~~~~~~q~~~v~~s~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~l~~~a~~   84 (412)
                      ..+...+.+++.|.+.||++||+++..+.+...+.    +.  ...+...      . +.++..-++.|...........
T Consensus        56 ~~~~~~~~~~~~G~l~Dr~g~r~~~~~~~~~~~~~----~~--~~~~~~~------~-~~l~~~~~l~G~~~~~~~~~~~  122 (405)
T TIGR00891        56 ALISRWFGALMFGLWGDRYGRRLPMVTSIVLFSAG----TL--ACGFAPG------Y-ITMFIARLVIGIGMGGEYGSSA  122 (405)
T ss_pred             HHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHH----HH--HHHHhcc------H-HHHHHHHHHHHhhhhhhhHHHH
Confidence            45677889999999999999999988876543222    21  1111111      1 2344445555655544443332


Q ss_pred             hhhcccceeeecCCCchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhcC--hhHHHHHHHHHHHHHHHHHHHHHHHhhh
Q 015168           85 VAVERDWAVLLAGINRPIALAKANAVLNRIDLLCEIAGASLFGILLSKYE--PVTCLKFAAGLIMWSLPVMIILTWFTNK  162 (412)
Q Consensus        85 ~ai~RDwv~~l~~~~~~~~L~~~Ns~l~~id~v~~llgP~lgG~L~~~~~--~~~~~~~~~~~~~~s~~~~~~~l~~~~~  162 (412)
                      . ...|    .++++   +..++++.......++.+++|.+++.+....+  |+..+.+.+...+..       .....+
T Consensus       123 ~-~i~~----~~~~~---~~~~~~~~~~~~~~~g~~~~~~l~~~l~~~~~~~w~~~f~~~~~~~~~~-------~~~~~~  187 (405)
T TIGR00891       123 A-YVIE----SWPKH---LRNKASGLLISGYAVGAVVAAQVYSLVVPVWGDGWRALFFISILPIIFA-------LWLRKN  187 (405)
T ss_pred             H-HHHH----hCChh---hhhHHHHHHHHHHHHHHHHHHHHHHHHHHhcCccHHHHHHHHHHHHHHH-------HHHHHh
Confidence            2 2234    44443   78899999999999999999999999998776  888765422111111       111234


Q ss_pred             ccccccccccccccccCCCCCCCCCCchhhhHHhHHHHHHhHHHHhcC-C-cchHHHH-HHHHHHHhhhccchHHHHHHH
Q 015168          163 ISSGVLDRAKCSQSCCRTSNEGPVPDADNIVDVGIEAIKLGWKEYMQQ-P-VLPASLA-YVLLCLNVVLTPGSLMTAFLT  239 (412)
Q Consensus       163 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~-~-v~~~~~~-~a~l~~t~v~~~~~~~~~y~~  239 (412)
                      .||++..++++.++...+++..+..+.++..+...++..+..+...++ + .+..... ....++. ........+.|++
T Consensus       188 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~  266 (405)
T TIGR00891       188 IPEAEDWKEKHAGKALVRTMVDILYGGEHRIANIVMTLAAAMVQSAGKRWPTFVYLVVLVLFANLY-SHPIQDLLPTYLK  266 (405)
T ss_pred             CCCChhHHHHhhhhhhhhhHHHHHhccchhhhhhhhhhhHHhhhhhhhhhHHHHHHHHHHHHHHHH-HhhhhhhhHHHHH
Confidence            454221111100000000000000000000000011111111111111 1 0111111 1111111 1223344566775


Q ss_pred             -hcCCCCchhHHHhhHHHHHHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHHhcCCCcCcchH--HHHHHHHH
Q 015168          240 -QRGLNPSIIGGFSGLCASMGVAATFLSAYLVRRLGILKAGAAGLIFQASLLAMAVAVYWSGSLSQQNPL--LFFLCLIV  316 (412)
Q Consensus       240 -~~gls~~~~G~~~~~~avggllGt~l~~~l~~R~g~~r~~~~~~~~~~~~l~~~v~~~~~g~~~~~~~~--~l~~~g~~  316 (412)
                       ++|+++.+.|.+.+...+++++|+++.+++.+|+|+++....+.....+   ........+. + ....  ..+..+..
T Consensus       267 ~~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~g~~~~~~~~~~~~~~---~~~~~~~~~~-~-~~~~~~~~~~~~~~  341 (405)
T TIGR00891       267 ADLGLSPHTVANIVVFSNIGAIVGGCVFGFLGDWLGRRKAYVCSLLAGQL---LIIPVFAIGA-N-VAVLGLGLFFQQML  341 (405)
T ss_pred             HHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCchhhhHHHHHHHHH---HHHHHHHhCC-c-hHHHHHHHHHHHHH
Confidence             5899999999999999999999999999999999998887766543211   1111111111 1 1111  11111111


Q ss_pred             HhhhhhhhhhhhhhHHhhccCCcccchhHHHHHHHHHHHHHHHHHHHHHhccC
Q 015168          317 LSRLGHMSYDIVGAQILQTGIPSSKANLIGTTEISVASLVESVMLGVAIIAND  369 (412)
Q Consensus       317 ~sr~GLw~~dl~~~~l~Q~~vp~~~~G~v~g~~~sl~~~~~ll~~~~~~~~~~  369 (412)
                      .  .+.  + .......|+..|+++||++.|+.+++.+....+...+.....+
T Consensus       342 ~--~~~--~-~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~g~~~~g~l~~  389 (405)
T TIGR00891       342 V--QGI--W-GILPKHLGEYFPTDQRAAGLGFTYQLGNLGGALAPIIGALLAQ  389 (405)
T ss_pred             H--ccc--h-hhHHHHHhhhCCcchhHHHhhHHHHHHHHHHHHHHHHHHHHHH
Confidence            1  111  2 2334567889999999999999999988866655555444433

>PRK14995 methyl viologen resistance protein SmvA; Provisional

Probab=99.66  E-value=2e-13  Score=142.30  Aligned_cols=318  Identities=14%  Similarity=0.023  Sum_probs=181.2

Q ss_pred             HHHHHHhhhhhcchhccCCcHHHHHHHHHHHHHHHHHHHHHHHHHhccccccccchhHHHHHHHHHHHHHHHHHhhhhhh
Q 015168            6 KLILIVGGPLVGKLMDHSPRIPAYICLNTVQAAAQLLSAAMIIHAHTVIPTSSSMLLHPWFFVLVLAGAVERLTGVALGV   85 (412)
Q Consensus         6 ~lp~ll~g~~~G~~vDr~~R~~v~~~~~~~q~~~v~~s~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~l~~~a~~~   85 (412)
                      .+....+.++.|.+.||++||+++..+.++..+...      ......       ..+.+++.-++.|............
T Consensus        51 ~l~~~~~~~~~G~l~D~~Grk~~l~~~~~~~~~~~~------~~~~a~-------~~~~li~~r~l~G~g~~~~~~~~~~  117 (495)
T PRK14995         51 SLVMAGMVLPMGALGDRIGFKRLLMLGGTLFGLASL------AAAFSP-------TASWLIATRALLAIGAAMIVPATLA  117 (495)
T ss_pred             HHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHH------HHHHcC-------CHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            456677889999999999999999888765433311      111111       1123343334555555444444333


Q ss_pred             hhcccceeeecCCCchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhcChhHHHHHHHHHHHHHHHHHHHHHHHhhhccc
Q 015168           86 AVERDWAVLLAGINRPIALAKANAVLNRIDLLCEIAGASLFGILLSKYEPVTCLKFAAGLIMWSLPVMIILTWFTNKISS  165 (412)
Q Consensus        86 ai~RDwv~~l~~~~~~~~L~~~Ns~l~~id~v~~llgP~lgG~L~~~~~~~~~~~~~~~~~~~s~~~~~~~l~~~~~~~~  165 (412)
                      .+.++    ..++   ++..++++.+.....++..+||.++|.+....+|+..|++.....++....      ....+|+
T Consensus       118 ~l~~~----~~~~---~~r~~~~g~~~~~~~~g~~~gp~lgg~l~~~~gwr~~f~i~~~~~~~~~~l------~~~~l~~  184 (495)
T PRK14995        118 GIRAT----FTEE---KQRNMALGVWAAVGSGGAAFGPLVGGILLEHFYWGSVFLINVPIVLVVMGL------TARYVPR  184 (495)
T ss_pred             HHHHH----cCCH---HHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCChHHHHHHHHHHHHHHHHH------HHHhCCC
Confidence            34443    2232   278999999999999999999999999999999999887654444433321      1122343


Q ss_pred             cccccccccccccC-------------CCCCCCCCCchhh--hH-----------HhHHHHHHh----HHHHhcCCcchH
Q 015168          166 GVLDRAKCSQSCCR-------------TSNEGPVPDADNI--VD-----------VGIEAIKLG----WKEYMQQPVLPA  215 (412)
Q Consensus       166 ~~l~~~~~~~~~~~-------------~~~~~~~~~~~~~--~~-----------~~~~~~~~g----~~~~~~~~v~~~  215 (412)
                      +..+++++.+....             .++ ..+......  ..           ....+.+..    -...+|||.+..
T Consensus       185 ~~~~~~~~~d~~g~~~~~~~~~~l~~~~~~-~~~~~~~~~~~~~~~~~~~~~l~~f~~~e~~~~~p~~~~~lf~~~~~~~  263 (495)
T PRK14995        185 QAGRRDQPLNLGHALMLIVAILLLVYSAKT-ALKGFLSLWVTSLTLLTGALLLGLFIRTQLAASRPMIDMRLFTHRIILS  263 (495)
T ss_pred             CCCCCCCCCChHhHHHHHHHHHHHHHHHHh-ccccCCchHHHHHHHHHHHHHHHHHHHHHhcCCCCCcCHHHhCCcccHH
Confidence            11000000000000             000 000000000  00           000010000    013577888877


Q ss_pred             HHHHHHHHHHhhhccchHHHHHHHh-cCCCCchhHHHhhHHHHHHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHH
Q 015168          216 SLAYVLLCLNVVLTPGSLMTAFLTQ-RGLNPSIIGGFSGLCASMGVAATFLSAYLVRRLGILKAGAAGLIFQASLLAMAV  294 (412)
Q Consensus       216 ~~~~a~l~~t~v~~~~~~~~~y~~~-~gls~~~~G~~~~~~avggllGt~l~~~l~~R~g~~r~~~~~~~~~~~~l~~~v  294 (412)
                      +............++....+.|++. +|+|+.+.|+.....+++..+++.+.+++.+|+|.++....+.....+....  
T Consensus       264 ~~~~~~~~~~~~~~~~~~~~~~lq~v~g~s~~~ag~~~~~~~~~~~~~~~~~g~l~~r~g~~~~~~~g~~~~~~~~~~--  341 (495)
T PRK14995        264 GVVMAMTAMITLVGFELLMAQELQFVHGLSPLEAGMFMLPVMVASGFSGPIAGILVSRLGLRLVATGGMALSALSFYG--  341 (495)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCchHHHHHHHHHHHHHHHH--
Confidence            6554444422112233345567764 8999999999999999999999999999999999977766555432222111  


Q ss_pred             HHHhcCCCcCcchHHHHHHHHHHhhhhhhhhhhhhhHHhhccCCcccchhHHHHHHHHHHHH
Q 015168          295 AVYWSGSLSQQNPLLFFLCLIVLSRLGHMSYDIVGAQILQTGIPSSKANLIGTTEISVASLV  356 (412)
Q Consensus       295 ~~~~~g~~~~~~~~~l~~~g~~~sr~GLw~~dl~~~~l~Q~~vp~~~~G~v~g~~~sl~~~~  356 (412)
                      ........+ .....   ...++.++|.-..........|+.+|++++|+++++.+..++..
T Consensus       342 l~~~~~~~~-~~~~~---~~~~l~G~g~g~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~lG  399 (495)
T PRK14995        342 LAMTDFSTQ-QWQAW---GLMALLGFSAASALLASTSAIMAAAPPEKAAAAGAIETMAYELG  399 (495)
T ss_pred             HHHhcCCCc-hHHHH---HHHHHHHHhHHHHHHHHHHHHHhcCCHHhcchHHHHHHHHHHHH
Confidence            111111111 11111   12233344544455667778889999999999999999888764

>TIGR00890 2A0111 Oxalate/Formate Antiporter

Probab=99.65  E-value=2.1e-13  Score=134.41  Aligned_cols=307  Identities=11%  Similarity=-0.018  Sum_probs=170.5

Q ss_pred             hHHHHHHhhhhhcchhccCCcHHHHHHHHHHHHHHHHHHHHHHHHHhccccccccchhHHHHHHHHHHHHHHHHHhhhhh
Q 015168            5 SKLILIVGGPLVGKLMDHSPRIPAYICLNTVQAAAQLLSAAMIIHAHTVIPTSSSMLLHPWFFVLVLAGAVERLTGVALG   84 (412)
Q Consensus         5 ~~lp~ll~g~~~G~~vDr~~R~~v~~~~~~~q~~~v~~s~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~l~~~a~~   84 (412)
                      ..+...+..++.|.+.||++||+++..+.+...+.    +.  ...+...      . +.+++.-.+.|..+........
T Consensus        47 ~~~~~~~~~~~~G~l~d~~G~r~~~~~~~~~~~~~----~~--~~~~~~~------~-~~~~~~~~~~g~~~~~~~~~~~  113 (377)
T TIGR00890        47 LLIGLAMSMPVGGLLADKFGPRAVAMLGGILYGLG----FT--FYAIADS------L-AALYLTYGLASAGVGIAYGIAL  113 (377)
T ss_pred             HHHHHHHHhhhhHHHHHHcCccchhHHhHHHHHHH----HH--HHHHHHH------H-HHHHHHHHHHhHHHHHHHHhHH
Confidence            45677889999999999999999988876544332    11  1111111      1 2233333344444333222222


Q ss_pred             hhhcccceeeecCCCchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhcChhHHHHHHHHHHHHHHHHHHHHHHHhhhcc
Q 015168           85 VAVERDWAVLLAGINRPIALAKANAVLNRIDLLCEIAGASLFGILLSKYEPVTCLKFAAGLIMWSLPVMIILTWFTNKIS  164 (412)
Q Consensus        85 ~ai~RDwv~~l~~~~~~~~L~~~Ns~l~~id~v~~llgP~lgG~L~~~~~~~~~~~~~~~~~~~s~~~~~~~l~~~~~~~  164 (412)
                      ..++ +|    .++    +..++++.......++.+++|.+.+.+.+..+|+..+.+.....++....    ...  .++
T Consensus       114 ~~~~-~~----~~~----~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~----~~~--~~~  178 (377)
T TIGR00890       114 NTAV-KW----FPD----KRGLASGIIIGGYGLGSFILSPLITSVINLEGVPAAFIYMGIIFLLVIVL----GAF--LIG  178 (377)
T ss_pred             HHHH-HH----cCc----ccHHHHHHHHHhcchhHhHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHH----HHH--hee
Confidence            2222 33    232    45678888888888888777777777777789998877644443333221    111  122


Q ss_pred             ccccccccccccccCCCCCCCCCCchhhhHHhHHHHHHhHHHHhcCCcchHHHHHHHH-HHHhhhccchHHHHHHHhcCC
Q 015168          165 SGVLDRAKCSQSCCRTSNEGPVPDADNIVDVGIEAIKLGWKEYMQQPVLPASLAYVLL-CLNVVLTPGSLMTAFLTQRGL  243 (412)
Q Consensus       165 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~v~~~~~~~a~l-~~t~v~~~~~~~~~y~~~~gl  243 (412)
                      +++  ++++.+ +  +    + .+          +....++..+++|.++........ ++. ..........|.+++|.
T Consensus       179 ~~~--~~~~~~-~--~----~-~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~  237 (377)
T TIGR00890       179 YPP--GQLIKT-N--I----E-VS----------VKDYTVWEMLRTPQFWVLYLSFFLNAVS-GLLLIGLYKPYGQSLGL  237 (377)
T ss_pred             cCc--hhcccc-C--c----c-cc----------hhhhhHHHHHcCccHHHHHHHHHHHhHH-HHHHHHHHHHHHHHcCC
Confidence            211  111000 0  0    0 00          001234556777776653322111 111 11122234456677899


Q ss_pred             CCchhHHHhhHHHHHHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHHhcCCCcCcchHHHHHHHHHHhhhhhh
Q 015168          244 NPSIIGGFSGLCASMGVAATFLSAYLVRRLGILKAGAAGLIFQASLLAMAVAVYWSGSLSQQNPLLFFLCLIVLSRLGHM  323 (412)
Q Consensus       244 s~~~~G~~~~~~avggllGt~l~~~l~~R~g~~r~~~~~~~~~~~~l~~~v~~~~~g~~~~~~~~~l~~~g~~~sr~GLw  323 (412)
                      ++...+.+.+...++++.++.+.+++.+|+|+++...++...........  ...+.. .  ....+....+.....|. 
T Consensus       238 ~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~--~~~~~~-~--~~~~~~~~~~~g~~~g~-  311 (377)
T TIGR00890       238 SDGFLVLAVSISSIFNGGGRPFLGALSDKIGRQKTMSIVFGISAVGMAAM--LFIPML-N--DVLFLATVALVFFTWGG-  311 (377)
T ss_pred             CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHH--HHcccc-h--hHHHHHHHHHHHHHhcc-
Confidence            99999999999999999999999999999999888776654332222111  111111 0  11111101111111122 


Q ss_pred             hhhhhhhHHhhccCCcccchhHHHHHHHHHHHHHHHHHHHHHhc
Q 015168          324 SYDIVGAQILQTGIPSSKANLIGTTEISVASLVESVMLGVAIIA  367 (412)
Q Consensus       324 ~~dl~~~~l~Q~~vp~~~~G~v~g~~~sl~~~~~ll~~~~~~~~  367 (412)
                       .......+.+|..|+++||++.|..++.+.....+...+....
T Consensus       312 -~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~~~~~~g~l  354 (377)
T TIGR00890       312 -TISLFPSLVSDIFGPANSAANYGFLYTAKAVAGIFGGLIASHA  354 (377)
T ss_pred             -chhccHHHHHHHhhhhhhhhHhHHHHHHHHHHHHHHHHHHHHH
Confidence             1223445678889999999999999999888666666554443

>TIGR00899 2A0120 sugar efflux transporter

Probab=99.64  E-value=8.3e-13  Score=131.08  Aligned_cols=296  Identities=15%  Similarity=0.062  Sum_probs=157.8

Q ss_pred             HHHHHhhhhhcchhccCCcHHHHHH-HHHHHHHHHHHHHHHHHHHhccccccccchhHHHHHHHHHHHHHHHHHhhhhhh
Q 015168            7 LILIVGGPLVGKLMDHSPRIPAYIC-LNTVQAAAQLLSAAMIIHAHTVIPTSSSMLLHPWFFVLVLAGAVERLTGVALGV   85 (412)
Q Consensus         7 lp~ll~g~~~G~~vDr~~R~~v~~~-~~~~q~~~v~~s~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~l~~~a~~~   85 (412)
                      +...+.+++.|.+.||++|||.+.. +.+.-    ++++.  .......      . +.+++..++.+......... ..
T Consensus        44 ~~~~~~~~~~g~l~Dr~g~r~~~~~~~~~~~----~~~~~--~~~~~~~------~-~~l~~~~~~~g~~~~~~~p~-~~  109 (375)
T TIGR00899        44 IVGIAVSQLLATRSDYQGDRKGLILFCCLLA----ALACL--LFAWNRN------Y-FLLLVLGVLLSSFASTANPQ-LF  109 (375)
T ss_pred             HHHHHHHHHHHHHHhccCCchHHHHHHHHHH----HHHHH--HHHhcch------H-HHHHHHHHHHHhhhhhhHHH-HH
Confidence            4567889999999999998887543 43321    11111  1112111      1 23333333444433333322 23


Q ss_pred             hhcccceeeecCCCchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhcChhHHHHHHHHHHHHHHHHHHHHHHHhhhccc
Q 015168           86 AVERDWAVLLAGINRPIALAKANAVLNRIDLLCEIAGASLFGILLSKYEPVTCLKFAAGLIMWSLPVMIILTWFTNKISS  165 (412)
Q Consensus        86 ai~RDwv~~l~~~~~~~~L~~~Ns~l~~id~v~~llgP~lgG~L~~~~~~~~~~~~~~~~~~~s~~~~~~~l~~~~~~~~  165 (412)
                      ++.+|    ..+++ +......|+.++....++..+||.++|.+.+..+|+..+++.+....+...    ..  ...+||
T Consensus       110 ~~~~~----~~~~~-~~~~~~~~~~~~~~~~~g~~ig~~~~~~l~~~~~~~~~f~~~~~~~~~~~~----~~--~~~~~~  178 (375)
T TIGR00899       110 ALARE----HADRT-GREAVMFSSVMRAQISLAWVIGPPLAFWLALGFGFTVMFLTAALAFVLCGV----LV--WLFLPS  178 (375)
T ss_pred             HHHHH----Hhhhc-chhhHHHHHHHHHHHhHHHHHhhhHHHHHHHhcccHHHHHHHHHHHHHHHH----HH--HHhCCC
Confidence            33444    33332 112223377888888899999999999999999999988765443333321    11  112343


Q ss_pred             cccccccccccccCCCCCCCCCCchhhhHHhHHHHHHhHHHHhcCCcchHHHHHHH-HHHHhhhccchHHHHHH-HhcCC
Q 015168          166 GVLDRAKCSQSCCRTSNEGPVPDADNIVDVGIEAIKLGWKEYMQQPVLPASLAYVL-LCLNVVLTPGSLMTAFL-TQRGL  243 (412)
Q Consensus       166 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~v~~~~~~~a~-l~~t~v~~~~~~~~~y~-~~~gl  243 (412)
                      + + ++++.     +    +  + +           +.++..+++|.++....... .+.. ...+....+.|+ +++|.
T Consensus       179 ~-~-~~~~~-----~----~--~-~-----------~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~g~  232 (375)
T TIGR00899       179 Y-P-RGAPG-----A----L--T-R-----------LEVRGLLASRDTRLLFVACTLMWGC-NILYIINMPLLIIHELGL  232 (375)
T ss_pred             c-c-cCccc-----c----c--C-c-----------chhhhhhcCcchHHHHHHHHHHHHH-HHHHHhhhHHHHHHHcCC
Confidence            1 1 11100     0    0  0 0           01222456666655332222 2221 112222345566 46899


Q ss_pred             CCchhHHHhhHHHHHHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHHhcCCCcCcchHHH--HHHHHHHhhhh
Q 015168          244 NPSIIGGFSGLCASMGVAATFLSAYLVRRLGILKAGAAGLIFQASLLAMAVAVYWSGSLSQQNPLLF--FLCLIVLSRLG  321 (412)
Q Consensus       244 s~~~~G~~~~~~avggllGt~l~~~l~~R~g~~r~~~~~~~~~~~~l~~~v~~~~~g~~~~~~~~~l--~~~g~~~sr~G  321 (412)
                      ++.+.|.+.+.....++.+..+.+++.+|+|.+|...++.......   ........+   ......  ++.|.   ..|
T Consensus       233 ~~~~~g~~~~~~~~~~~~~~~~~g~l~~r~g~~~~~~~~~~~~~~~---~~~~~~~~~---~~~~~~~~~~~g~---~~g  303 (375)
T TIGR00899       233 PDKLAGLMMGTAAGLEIPFMLLAGYLIKRFGKRRLMLLAALAGVAF---YTGLAADNS---LWALLMLQLLNAI---FIG  303 (375)
T ss_pred             CHHHHHHHHHHHHHHHHHHHHhHHHHHHHhcchhHHHHHHHHHHHH---HHHHHHHHH---HHHHHHHHHHHHH---HHH
Confidence            9999999999988888999999999999999988876654422111   111111111   111111  11111   223


Q ss_pred             hhhhhhhhhHHhhccCCcccchhHHHHHHHHHHHHHHHHHHHHH
Q 015168          322 HMSYDIVGAQILQTGIPSSKANLIGTTEISVASLVESVMLGVAI  365 (412)
Q Consensus       322 Lw~~dl~~~~l~Q~~vp~~~~G~v~g~~~sl~~~~~ll~~~~~~  365 (412)
                      .  .........||..|+ ++|++++..++..+....+...+..
T Consensus       304 ~--~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~g~~~g~~~~g  344 (375)
T TIGR00899       304 I--LAGIGMLYFQDLMPG-RAGAATTLYTNTGRVGWIIAGSVGG  344 (375)
T ss_pred             H--HHHHHHHHHHHhCcc-hhhHHHHHHHHHHHHHHHHHHHHHH
Confidence            3  223344566776665 5679999999888865555444433

This family of proteins is an efflux system for lactose, glucose, aromatic glucosides and galactosides, cellobiose, maltose, a-methyl glucoside and other sugar compounds. They are found in both gram-negative and gram-postitive bacteria.

>TIGR00881 2A0104 phosphoglycerate transporter family protein

Probab=99.64  E-value=5.5e-14  Score=138.66  Aligned_cols=324  Identities=11%  Similarity=-0.015  Sum_probs=175.5

Q ss_pred             hHHHHHHhhhhhcchhccCCcHHHHHHHHHHHHHHHHHHHHHHHHHhccccccccchhHHHHHHHHHHHHHHHHHhhhhh
Q 015168            5 SKLILIVGGPLVGKLMDHSPRIPAYICLNTVQAAAQLLSAAMIIHAHTVIPTSSSMLLHPWFFVLVLAGAVERLTGVALG   84 (412)
Q Consensus         5 ~~lp~ll~g~~~G~~vDr~~R~~v~~~~~~~q~~~v~~s~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~l~~~a~~   84 (412)
                      ..+...+..++.|.+.||++||+++..+.+...+...      ...+...      . +.+++..++.|...........
T Consensus        39 ~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~------~~~~~~~------~-~~~~~~~~~~g~~~~~~~~~~~  105 (379)
T TIGR00881        39 FSIAYGISKFVMGSVSDRSNPRVFLPIGLILCAIVNL------FFGFSTS------L-WVMAALWALNGIFQGMGWPPCG  105 (379)
T ss_pred             HHHHHHhhhhhhhHHHHhhCCeehhHHHHHHHHHHHH------HHHHhhh------H-HHHHHHHHHHHhhccccCCchH
Confidence            4567778899999999999999998888664433211      1111111      1 2333434444544443333332


Q ss_pred             hhhcccceeeecCCCchhhhHHHHHHHHHHHHHHHHHHH-HHHHHHHhhcChhHHHHHHHHHHHHHHHHHHHHHHHhhhc
Q 015168           85 VAVERDWAVLLAGINRPIALAKANAVLNRIDLLCEIAGA-SLFGILLSKYEPVTCLKFAAGLIMWSLPVMIILTWFTNKI  163 (412)
Q Consensus        85 ~ai~RDwv~~l~~~~~~~~L~~~Ns~l~~id~v~~llgP-~lgG~L~~~~~~~~~~~~~~~~~~~s~~~~~~~l~~~~~~  163 (412)
                       ++..|    .++++   +..+.++.......++.+++| .+++.+....+|+..+++.+....+....    ..  ...
T Consensus       106 -~~~~~----~~~~~---~r~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~--~~~  171 (379)
T TIGR00881       106 -RTVTK----WFSRS---ERGTWVSFWNCSHNVGGGLLPPLVLFGIAELYSWHWVFIVPGIIAIIVSLI----CF--LLL  171 (379)
T ss_pred             -HHHHH----hcCHh---hheeeEeehhccchhHHHHHHHHHHHHHHhcCCchhHHHHHHHHHHHHHHH----Hh--eee
Confidence             23334    45543   678889999999999999999 57777777789998776544333322211    11  112


Q ss_pred             ccccccccc-cccc-ccCCCCCCCCCCchhhhHHhHHHHHHhHHHHhcCCcchHHHHH-HHHHHHhhhccchHHHHHHHh
Q 015168          164 SSGVLDRAK-CSQS-CCRTSNEGPVPDADNIVDVGIEAIKLGWKEYMQQPVLPASLAY-VLLCLNVVLTPGSLMTAFLTQ  240 (412)
Q Consensus       164 ~~~~l~~~~-~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~v~~~~~~~-a~l~~t~v~~~~~~~~~y~~~  240 (412)
                      +|+...++. +.++ ..+++++.. .+ .   ++..+...+.++..+++|.++..... ...+.. ...+....+.|+.+
T Consensus       172 ~~~~~~~~~~~~~~~~~~~~~~~~-~~-~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~  245 (379)
T TIGR00881       172 RDSPQSCGLPPAEEMPNEEPDGDA-EK-K---EEELTKKQIFLQYVLLNKVLWYISLGYVFVYVV-RTGILDWSPLYLTQ  245 (379)
T ss_pred             CCCccccccCccccCccccccccc-cc-c---cccccchHHHHHHHHhcchHHHHHHHHHHHHHH-HHHHHHHHHHHHHH
Confidence            221100000 0000 000000000 00 0   01111223457778888887764332 223322 23344456677764


Q ss_pred             -cCCCCchhHHHhhHHHHHHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHHhcCCCcCcch--HHHHHHHHHH
Q 015168          241 -RGLNPSIIGGFSGLCASMGVAATFLSAYLVRRLGILKAGAAGLIFQASLLAMAVAVYWSGSLSQQNP--LLFFLCLIVL  317 (412)
Q Consensus       241 -~gls~~~~G~~~~~~avggllGt~l~~~l~~R~g~~r~~~~~~~~~~~~l~~~v~~~~~g~~~~~~~--~~l~~~g~~~  317 (412)
                       .|+++...|...+...+++++|..+.+++.+|.+.+|...........+ ..+....+..+......  ...+..|.  
T Consensus       246 ~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~~r~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~g~--  322 (379)
T TIGR00881       246 EKGFSKEKASWAFTLYELGGLVGTLLAGWLSDKLFNGRRGPLAVFFMALI-IVSLLVYWLNPAANPLMDLICLFALGF--  322 (379)
T ss_pred             HhCCCHHHHHHHHHHHHHHcchhHHHHHHHHHHHcCCcchHHHHHHHHHH-HHHHHHHhcCcchhHHHHHHHHHHHHH--
Confidence             7999999999999999999999999999999875444322222211111 11111111111010011  11111211  


Q ss_pred             hhhhhhhhhhhhhHHhhccCCcccchhHHHHHHHHHHHHHHHHHHHHHhc
Q 015168          318 SRLGHMSYDIVGAQILQTGIPSSKANLIGTTEISVASLVESVMLGVAIIA  367 (412)
Q Consensus       318 sr~GLw~~dl~~~~l~Q~~vp~~~~G~v~g~~~sl~~~~~ll~~~~~~~~  367 (412)
                         .............++.+|+++||++.|+.++.++....+...+....
T Consensus       323 ---~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l  369 (379)
T TIGR00881       323 ---LVYGPQMLIGVIASELAPKKAAGTAAGFVGFFAYLGGILAGLPLGYL  369 (379)
T ss_pred             ---HHhhhhHHHHHHHHHhcCcchhHHHHHHHHHhhhhhhhhhhhhHHHH
Confidence               11122233445678889999999999999999988666555544333

>COG2814 AraJ Arabinose efflux permease [Carbohydrate transport and metabolism]

Probab=99.63  E-value=1.4e-12  Score=130.47  Aligned_cols=293  Identities=18%  Similarity=0.154  Sum_probs=180.6

Q ss_pred             HHHHHhhhhhcchhccCCcHHHHHHHHHHHHHHHHHHHHHHHHHhccccccccchhHHHHHH-HHHHHHHHHHHhhhhhh
Q 015168            7 LILIVGGPLVGKLMDHSPRIPAYICLNTVQAAAQLLSAAMIIHAHTVIPTSSSMLLHPWFFV-LVLAGAVERLTGVALGV   85 (412)
Q Consensus         7 lp~ll~g~~~G~~vDr~~R~~v~~~~~~~q~~~v~~s~~~~~~~~~~~~~~~~~~~~~l~~~-~~~~g~~~~l~~~a~~~   85 (412)
                      +-+.+.+|+...+.||+||||++......=.++-.+++      +..       .++.+.+. ++.--+...++.++...
T Consensus        59 l~~ai~ap~l~~lt~r~~Rr~lLl~~l~lFi~~n~l~a------lAp-------~f~~Ll~aR~~~g~a~G~f~~i~~~~  125 (394)
T COG2814          59 LGVALGAPLLALLTGRLERRRLLLGLLALFIVSNLLSA------LAP-------SFAVLLLARALAGLAHGVFWSIAAAL  125 (394)
T ss_pred             HHHHHHHHHHHHHHcccchHHHHHHHHHHHHHHHHHHH------Hhc-------cHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            45678899999999999999997776543222211111      111       11111111 11222233444444444


Q ss_pred             hhcccceeeecCCCchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhcChhHHHHHHHHHHHHHHHHHHHHHHHhhhccc
Q 015168           86 AVERDWAVLLAGINRPIALAKANAVLNRIDLLCEIAGASLFGILLSKYEPVTCLKFAAGLIMWSLPVMIILTWFTNKISS  165 (412)
Q Consensus        86 ai~RDwv~~l~~~~~~~~L~~~Ns~l~~id~v~~llgP~lgG~L~~~~~~~~~~~~~~~~~~~s~~~~~~~l~~~~~~~~  165 (412)
                      +.  |    +++++   +-.|+.+.+..--.++.++|.++|.++=+.+|||.+|+.++..+.+.+.      +....+|+
T Consensus       126 a~--~----lvpp~---~~~~Aiaiv~~G~tlA~v~GvPLGt~ig~~~GWR~~F~~ia~l~ll~~~------~~~~~lP~  190 (394)
T COG2814         126 AA--R----LVPPG---KRGRALALVFTGLTLATVLGVPLGTFLGQLFGWRATFLAIAVLALLALL------LLWKLLPP  190 (394)
T ss_pred             HH--H----HcCcc---chhhHHHHHHHHHHHHHHHhccHHHHHHHHhhHHHHHHHHHHHHHHHHH------HHHHhCCC
Confidence            33  3    88865   7899999999999999999999999999999999999887777776663      33344551


Q ss_pred             cccccccccccccCCCCCCCCCCchhhhHHhHHHHHHhHHHHhcCCcchHHHHHHHHHHHhhhccchHHHHH----HH-h
Q 015168          166 GVLDRAKCSQSCCRTSNEGPVPDADNIVDVGIEAIKLGWKEYMQQPVLPASLAYVLLCLNVVLTPGSLMTAF----LT-Q  240 (412)
Q Consensus       166 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~v~~~~~~~a~l~~t~v~~~~~~~~~y----~~-~  240 (412)
                          ++.++          +.+.      +     .+.....+|||..+..+....++++  ..|.  .+.|    +. .
T Consensus       191 ----~~~~~----------~~~~------~-----~~~~~~~l~~p~v~~~l~~t~l~~~--g~F~--~ftYi~P~L~~v  241 (394)
T COG2814         191 ----SEISG----------SLPG------P-----LRTLLRLLRRPGVLLGLLATFLFMT--GHFA--LYTYIRPFLESV  241 (394)
T ss_pred             ----ccCCC----------CCCc------c-----hhHHHHHhcCchHHHHHHHHHHHHc--chhh--hHHhHHHHHHHc
Confidence                11110          0000      0     1123346889988887777777743  1111  2333    33 4


Q ss_pred             cCCCCchhHHHhhHHHHHHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHHhcCCCcCcchHHHHHHHHHHhhh
Q 015168          241 RGLNPSIIGGFSGLCASMGVAATFLSAYLVRRLGILKAGAAGLIFQASLLAMAVAVYWSGSLSQQNPLLFFLCLIVLSRL  320 (412)
Q Consensus       241 ~gls~~~~G~~~~~~avggllGt~l~~~l~~R~g~~r~~~~~~~~~~~~l~~~v~~~~~g~~~~~~~~~l~~~g~~~sr~  320 (412)
                      .|+|++.+++..-..+++++.|+.+.+|+.+| +.+++.......+...+..  ..+..++    ....+  ..++.  .
T Consensus       242 ~g~s~~~vs~~Ll~~Gv~~~~Gn~~gGrl~dr-~~~~~l~~~~~l~a~~~l~--l~~~~~~----~~~~~--~~~~~--w  310 (394)
T COG2814         242 AGFSVSAVSLVLLAFGIAGFIGNLLGGRLADR-GPRRALIAALLLLALALLA--LTFTGAS----PALAL--ALLFL--W  310 (394)
T ss_pred             cCCCHhHHHHHHHHHHHHHHHHHHHHhhhccc-cchhHHHHHHHHHHHHHHH--HHHhcch----HHHHH--HHHHH--H
Confidence            79999999999999999999999999999999 8888877665543333222  2333322    11111  11111  1


Q ss_pred             hhhhhhhhhhHHhhccCC---cccchhHHHHHHHHHHH-HHHHHHHHHHhccC
Q 015168          321 GHMSYDIVGAQILQTGIP---SSKANLIGTTEISVASL-VESVMLGVAIIAND  369 (412)
Q Consensus       321 GLw~~dl~~~~l~Q~~vp---~~~~G~v~g~~~sl~~~-~~ll~~~~~~~~~~  369 (412)
                      |+ . .....|.+|...-   ||.++.+++.+.+..|. ..+...+.+....+
T Consensus       311 g~-a-~~~~~~~~~~~~a~~~p~~~~~a~sl~~aa~nlgia~GA~lGG~v~~~  361 (394)
T COG2814         311 GF-A-FSPALQGLQTRLARLAPDAADLAGSLNVAAFNLGIALGAALGGLVLDA  361 (394)
T ss_pred             HH-H-hhhhhhHHHHHhcccCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence            22 1 1233344444443   48999999999888887 55555555555555

>PRK09705 cynX putative cyanate transporter; Provisional

Probab=99.63  E-value=8.2e-13  Score=133.53  Aligned_cols=330  Identities=12%  Similarity=0.029  Sum_probs=184.8

Q ss_pred             HHHHHHhhhhhcchhccCCcHHHHHHHHHHHHHHHHHHHHHHHHHhccccccccchhHHHHHHHHHHHHHHHHHhhhhhh
Q 015168            6 KLILIVGGPLVGKLMDHSPRIPAYICLNTVQAAAQLLSAAMIIHAHTVIPTSSSMLLHPWFFVLVLAGAVERLTGVALGV   85 (412)
Q Consensus         6 ~lp~ll~g~~~G~~vDr~~R~~v~~~~~~~q~~~v~~s~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~l~~~a~~~   85 (412)
                      .+...+..++.|.+.||++|||++..+...-.+...      ...+..+      . +.+++.-++.|.......... .
T Consensus        54 ~~~~~l~~~~~g~l~dr~G~r~~l~~~~~l~~~~~~------~~~~a~~------~-~~ll~~r~l~Gig~~~~~~~~-~  119 (393)
T PRK09705         54 VVTMGGLALAGSWLHQHVSERRSVAISLLLIAVGAL------MRELYPQ------S-ALLLSSALLGGVGIGIIQAVM-P  119 (393)
T ss_pred             HHHHHHHhhhhHHHHHHhCchHHHHHHHHHHHHHHH------HHHHCcc------h-HHHHHHHHHHHhHHHHHhhhh-h
Confidence            456778899999999999999998888664433211      1222221      1 234444455555555544433 3


Q ss_pred             hhcccceeeecCCCchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhc-ChhHHHHHHHHHHHHHHHHHHHHHHHhhhcc
Q 015168           86 AVERDWAVLLAGINRPIALAKANAVLNRIDLLCEIAGASLFGILLSKY-EPVTCLKFAAGLIMWSLPVMIILTWFTNKIS  164 (412)
Q Consensus        86 ai~RDwv~~l~~~~~~~~L~~~Ns~l~~id~v~~llgP~lgG~L~~~~-~~~~~~~~~~~~~~~s~~~~~~~l~~~~~~~  164 (412)
                      ++.+||    +++    +..++|+........+..+||.+++.+.+.. +|+..+.+......+...     .+..  ..
T Consensus       120 ~~~~~~----~~~----~~~~~~g~~~~~~~~g~~~g~~~~~~l~~~~~~w~~~~~~~~~~~~~~~~-----~~~~--~~  184 (393)
T PRK09705        120 SVIKRR----FQQ----RTPLVMGLWSAALMGGGGLGAAITPWLVQHSETWYQTLAWWALPAVVALF-----AWWW--QS  184 (393)
T ss_pred             HHHHHH----ccc----cchhHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHH-----HHHH--Hh
Confidence            344553    332    4578888888888888999999999988875 899876543222221111     1111  11


Q ss_pred             ccccccccccccccCCCCCCCCCCchhhhHHhHHHHHHhHHHHhcCCcchH-HHHHHHHHHHhhhccchHHHHHHHhcCC
Q 015168          165 SGVLDRAKCSQSCCRTSNEGPVPDADNIVDVGIEAIKLGWKEYMQQPVLPA-SLAYVLLCLNVVLTPGSLMTAFLTQRGL  243 (412)
Q Consensus       165 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~v~~~-~~~~a~l~~t~v~~~~~~~~~y~~~~gl  243 (412)
                      ++++ +++++          ++++               .+..+++|.++. .+.+.+.++. ........+.|+.++|+
T Consensus       185 ~~~~-~~~~~----------~~~~---------------~~~~l~~~~~~~l~~~~~~~~~~-~~~~~~~lp~~l~~~g~  237 (393)
T PRK09705        185 AREV-ASSHK----------TTTT---------------PVRVVFTPRAWTLGVYFGLINGG-YASLIAWLPAFYIEIGA  237 (393)
T ss_pred             cCCC-ccccC----------CCcC---------------CcccccCHhHHHHHHHHHHHHHH-HHHHHHHHHHHHHHcCC
Confidence            1010 00000          0000               011223343333 2222111111 11222335566777899


Q ss_pred             CCchhHHHhhHHHHHHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHHhcCCCcCcchHHHHHHHHHHhhhhhh
Q 015168          244 NPSIIGGFSGLCASMGVAATFLSAYLVRRLGILKAGAAGLIFQASLLAMAVAVYWSGSLSQQNPLLFFLCLIVLSRLGHM  323 (412)
Q Consensus       244 s~~~~G~~~~~~avggllGt~l~~~l~~R~g~~r~~~~~~~~~~~~l~~~v~~~~~g~~~~~~~~~l~~~g~~~sr~GLw  323 (412)
                      ++...|...+..+++++.|+.+.+++.+|+|.++...++..........  ....+..   ......++.|+   ..|. 
T Consensus       238 s~~~ag~~~~~~~i~~i~g~~~~g~l~~r~~~~~~~~~~~~l~~~~~~~--~~~~~~~---~~~~~~~l~g~---g~g~-  308 (393)
T PRK09705        238 SAQYSGSLLALMTLGQAAGALLMPAMARHQDRRKLLMLALVLQLVGFCG--FIWLPLQ---LPVLWAMVCGL---GLGG-  308 (393)
T ss_pred             ChhhhhHHHHHHHHHHHHHHHHHHHHHhhccchHHHHHHHHHHHHHHHH--HHHccch---HHHHHHHHHHH---hccc-
Confidence            9999999999999999999999999999999988877665433222111  1111211   11121222222   2233 


Q ss_pred             hhhhhhhHHhhccCCcccchhHHHHHHHHHHHHHHHHHHHHHhccCC-CchhHHHHHHHHHHHHHHHHHHHHhcCCCc
Q 015168          324 SYDIVGAQILQTGIPSSKANLIGTTEISVASLVESVMLGVAIIANDV-SHFGFLATLSLLSVVGAAWMFCHWLLNPTD  400 (412)
Q Consensus       324 ~~dl~~~~l~Q~~vp~~~~G~v~g~~~sl~~~~~ll~~~~~~~~~~~-~~f~~l~~~s~~~v~~~~~~~~~~~~~~~~  400 (412)
                      .++.......|+..|++++|++.|..+++.+....+.+.+.....|. ..+.....+..+....+......+..++||
T Consensus       309 ~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~~~~~gp~~~G~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  386 (393)
T PRK09705        309 AFPLCLLLALDHSVQPAIAGKLVAFMQGIGFIIAGLAPWFSGVLRSISGNYLMDWAFHALCVVGLMIITLRFAPARFP  386 (393)
T ss_pred             hHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchHHHHHHHHHHHHHHHHHHHhcccccc
Confidence            34556666677766778999999999999988766666665444443 334444444333333344444444444443

>PRK15011 sugar efflux transporter B; Provisional

Probab=99.62  E-value=1.7e-12  Score=131.14  Aligned_cols=301  Identities=15%  Similarity=0.053  Sum_probs=156.9

Q ss_pred             HHHHHHhhhhhcchhccCCcHHH-HHHHHHHHHHHHHHHHHHHHHHhccccccccchhHHHHHHHHHHHHHHHHHhhhhh
Q 015168            6 KLILIVGGPLVGKLMDHSPRIPA-YICLNTVQAAAQLLSAAMIIHAHTVIPTSSSMLLHPWFFVLVLAGAVERLTGVALG   84 (412)
Q Consensus         6 ~lp~ll~g~~~G~~vDr~~R~~v-~~~~~~~q~~~v~~s~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~l~~~a~~   84 (412)
                      .+...+++++.|.+.||++|||. +..+.+.-.+.    +.  ...+...      . +.+++...+.+..+.... ...
T Consensus        61 ~~~~~~~~~~~~~~~dr~g~r~~~~~~~~~~~~~~----~~--~~~~~~~------~-~~l~~~~~~~~~~~~~~~-~~~  126 (393)
T PRK15011         61 AVIGILVSQFLAGRSDKRGDRKSLIVFCCLLGVLA----CT--LFAWNRN------Y-FVLLFVGVFLSSFGSTAN-PQM  126 (393)
T ss_pred             HHHHHHHHHHHHHHHhcccchhHHHHHHHHHHHHH----HH--HHHHhhH------H-HHHHHHHHHHHHHHHhhH-HHH
Confidence            35567788898888999988876 55554422111    11  1112110      1 223333334444444333 333


Q ss_pred             hhhcccceeeecCCCchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhcChhHHHHHHHHHHHHHHHHHHHHHHHhhhcc
Q 015168           85 VAVERDWAVLLAGINRPIALAKANAVLNRIDLLCEIAGASLFGILLSKYEPVTCLKFAAGLIMWSLPVMIILTWFTNKIS  164 (412)
Q Consensus        85 ~ai~RDwv~~l~~~~~~~~L~~~Ns~l~~id~v~~llgP~lgG~L~~~~~~~~~~~~~~~~~~~s~~~~~~~l~~~~~~~  164 (412)
                      .++.+||    .+++ +.+....|+..+....++.++||+++|.+...+||+..|++.+...++...      .....+|
T Consensus       127 ~~~~~~~----~~~~-~~~~~~~~~~~~~~~~lg~~~g~~i~~~l~~~~gw~~~f~~~~~~~~~~~~------~~~~~~~  195 (393)
T PRK15011        127 FALAREH----ADKT-GREAVMFSSFLRAQVSLAWVIGPPLAYALAMGFSFTVMYLSAAVAFIVCGV------MVWLFLP  195 (393)
T ss_pred             HHHHHHH----hhhc-cchHHHHHHHHHHHHHHHHHHhhHHHHHHHHhcChHHHHHHHHHHHHHHHH------HHHhhcC
Confidence            3444453    2322 113456778899899999999999999999989999887654433333221      1112234


Q ss_pred             ccccccccccccccCCCCCCCCCCchhhhHHhHHHHHHhHHHHhcCC-cchHHHHHHHHHHHhhhccchHHHHHHH-hcC
Q 015168          165 SGVLDRAKCSQSCCRTSNEGPVPDADNIVDVGIEAIKLGWKEYMQQP-VLPASLAYVLLCLNVVLTPGSLMTAFLT-QRG  242 (412)
Q Consensus       165 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~-v~~~~~~~a~l~~t~v~~~~~~~~~y~~-~~g  242 (412)
                      |..  ++++.+    +    +  +        .+    ..+   +++ .....+....+.......+....+.|.+ ++|
T Consensus       196 ~~~--~~~~~~----~----~--~--------~~----~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~~  248 (393)
T PRK15011        196 SMR--KELPLA----T----G--T--------LE----APR---RNRRDTLLLFVICTLMWGTNSLYIINMPLFIINELH  248 (393)
T ss_pred             ccC--CCCccc----c----c--c--------cc----ccc---cccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC
Confidence            311  111100    0    0  0        00    000   111 1111111111111101112233556775 589


Q ss_pred             CCCchhHHHhhHHHHHHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHHhcCCCcCcchHH-HHHHHHHHhhhh
Q 015168          243 LNPSIIGGFSGLCASMGVAATFLSAYLVRRLGILKAGAAGLIFQASLLAMAVAVYWSGSLSQQNPLL-FFLCLIVLSRLG  321 (412)
Q Consensus       243 ls~~~~G~~~~~~avggllGt~l~~~l~~R~g~~r~~~~~~~~~~~~l~~~v~~~~~g~~~~~~~~~-l~~~g~~~sr~G  321 (412)
                      +++...|.+.+...+.++.+.++.+++.+|+|++|....+.......   .......+.  ...... .+..++   ..|
T Consensus       249 ~~~~~~g~~~~~~~~~~i~~~~~~G~l~dr~g~~~~~~~~~~~~~~~---~~~~~~~~~--~~~~l~~~~l~~~---~~g  320 (393)
T PRK15011        249 LPEKLAGVMMGTAAGLEIPTMLIAGYFAKRLGKRFLMRVAAVAGVCF---YAGMLMAHS--PAILLGLQLLNAI---YIG  320 (393)
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHH---HHHHHHHhh--HHHHHHHHHHHHH---HHH
Confidence            99999999999888889999999999999999988766554321111   111111221  011111 111111   122


Q ss_pred             hhhhhhhhhHHhhccCCcccchhHHHHHHHHHHHHHHHHHHHHHhccC
Q 015168          322 HMSYDIVGAQILQTGIPSSKANLIGTTEISVASLVESVMLGVAIIAND  369 (412)
Q Consensus       322 Lw~~dl~~~~l~Q~~vp~~~~G~v~g~~~sl~~~~~ll~~~~~~~~~~  369 (412)
                      . .... .....||..|+ ++|++++..++.++....+...++....+
T Consensus       321 ~-~~~~-~~~~~~~~~p~-~~g~~~~~~~~~~~lg~~~g~~l~G~i~~  365 (393)
T PRK15011        321 I-LGGI-GMLYFQDLMPG-QAGSATTLYTNTSRVGWIIAGSLAGIVAE  365 (393)
T ss_pred             H-HHHH-HHHHHHHhCCC-CcchHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            2 1122 23446776665 69999999888877655555555544444

>PRK11273 glpT sn-glycerol-3-phosphate transporter; Provisional

Probab=99.61  E-value=1.3e-12  Score=134.54  Aligned_cols=319  Identities=12%  Similarity=0.014  Sum_probs=160.0

Q ss_pred             hHHHHHHhhhhhcchhccCCcHHHHHHHHHHHHHHHHHHHHHHHHHhccccccccchhHHHHHHHHHHHHHHHHHhhhhh
Q 015168            5 SKLILIVGGPLVGKLMDHSPRIPAYICLNTVQAAAQLLSAAMIIHAHTVIPTSSSMLLHPWFFVLVLAGAVERLTGVALG   84 (412)
Q Consensus         5 ~~lp~ll~g~~~G~~vDr~~R~~v~~~~~~~q~~~v~~s~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~l~~~a~~   84 (412)
                      ..+...+.+++.|.+.||++||+++..+.+...+...+    ..+.....   +  ..+.+++..++.|..+........
T Consensus        72 ~~i~~~~~~~~~G~l~Dr~g~k~~l~~~~~~~~i~~~~----~~~~~~~~---~--~~~~~~~~~~l~gi~~g~~~~~~~  142 (452)
T PRK11273         72 ISIAYGFSKFIMGSVSDRSNPRVFLPAGLILAAAVMLF----MGFVPWAT---S--SIAVMFVLLFLCGWFQGMGWPPCG  142 (452)
T ss_pred             HHHHHHHHHhhhhhhhhccCCchhHHHHHHHHHHHHHH----HHhhhccc---c--cHHHHHHHHHHHHHHHhccchHHH
Confidence            45677889999999999999999988886544332111    11111110   0  112233333445555444433222


Q ss_pred             hhhcccceeeecCCCchhhhHHHHHHHHHHHHHHH-HHHHHHHHHHHhhcChhHHHHHHHHHHHHHHHHHHHHHHHhhhc
Q 015168           85 VAVERDWAVLLAGINRPIALAKANAVLNRIDLLCE-IAGASLFGILLSKYEPVTCLKFAAGLIMWSLPVMIILTWFTNKI  163 (412)
Q Consensus        85 ~ai~RDwv~~l~~~~~~~~L~~~Ns~l~~id~v~~-llgP~lgG~L~~~~~~~~~~~~~~~~~~~s~~~~~~~l~~~~~~  163 (412)
                      ..+. |    .++++   +..+.++.......++. +.+|++++.+....+|+.++++.+...++....   ....+++.
T Consensus       143 ~~~~-~----~~~~~---~r~~~~~~~~~~~~~g~~~~~~l~~~~~~~~~gw~~~f~i~~~~~~~~~~l---~~~~~~~~  211 (452)
T PRK11273        143 RTMV-H----WWSQK---ERGGIVSVWNCAHNVGGGLPPLLFLLGMAWFNDWHAALYMPAFAAILVALF---AFAMMRDT  211 (452)
T ss_pred             HHHH-H----hCChH---HHHHHHHHHHHHHHhhhhHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHH---HHHHccCC
Confidence            2232 3    34432   67788888777777775 667776555544568998887654433332211   11112222


Q ss_pred             cccccccccccccccC-CCCCCCCCCchhhhHHhHHHHHHhH-HHHhcCCcchHHHHH-HHHHHHhhhccchHHHHHHHh
Q 015168          164 SSGVLDRAKCSQSCCR-TSNEGPVPDADNIVDVGIEAIKLGW-KEYMQQPVLPASLAY-VLLCLNVVLTPGSLMTAFLTQ  240 (412)
Q Consensus       164 ~~~~l~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~g~-~~~~~~~v~~~~~~~-a~l~~t~v~~~~~~~~~y~~~  240 (412)
                      |+.. ..+++.+...+ +++.++..+ +   +   .+..+.+ +..+++|.++..... .+.+.. ..+.....+.|+++
T Consensus       212 ~~~~-~~~~~~~~~~~~~~~~~~~~~-~---~---~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~-~~~~~~~~P~~l~~  282 (452)
T PRK11273        212 PQSC-GLPPIEEYKNDYPDDYNEKHE-Q---E---LTAKQIFMQYVLPNKLLWYIAIANVFVYLL-RYGILDWSPTYLKE  282 (452)
T ss_pred             Hhhc-CCCChhhhhhccccccccccC-C---C---ccHHHHHHHHHHcChHHHHHHHHHHHHHHH-HHHHHHHHHHHHHH
Confidence            2110 00000000000 000000000 0   0   0122333 236788887764333 333322 13334457778875


Q ss_pred             -cCCCCchhHHHhhHHHHHHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHHhcCCCcCcch--HHHHHHHHHH
Q 015168          241 -RGLNPSIIGGFSGLCASMGVAATFLSAYLVRRLGILKAGAAGLIFQASLLAMAVAVYWSGSLSQQNP--LLFFLCLIVL  317 (412)
Q Consensus       241 -~gls~~~~G~~~~~~avggllGt~l~~~l~~R~g~~r~~~~~~~~~~~~l~~~v~~~~~g~~~~~~~--~~l~~~g~~~  317 (412)
                       +|+++...+......+++++.|+++.+++.+|++.+|......... .+.......++.........  ..++..|.  
T Consensus       283 ~~g~s~~~~~~~~~~~~~~~~~g~~~~G~l~dr~~~~r~~~~~~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~--  359 (452)
T PRK11273        283 VKHFALDKSSWAYFLYEYAGIPGTLLCGWMSDKVFRGNRGATGVFFM-TLVTIATIVYWLNPAGNPTVDMACMIVIGF--  359 (452)
T ss_pred             hcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCCcchHHHHHH-HHHHHHHHHHHHhcccChHHHHHHHHHHHH--
Confidence             7999999999999999999999999999999995433211111110 11111111111111000011  11121221  


Q ss_pred             hhhhhhhhhhhhhHHhhccCCcccchhHHHHHHHHHHHHHH
Q 015168          318 SRLGHMSYDIVGAQILQTGIPSSKANLIGTTEISVASLVES  358 (412)
Q Consensus       318 sr~GLw~~dl~~~~l~Q~~vp~~~~G~v~g~~~sl~~~~~l  358 (412)
                         +............++..|++++|+++|..++..++...
T Consensus       360 ---~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~  397 (452)
T PRK11273        360 ---LIYGPVMLIGLHALELAPKKAAGTAAGFTGLFGYLGGS  397 (452)
T ss_pred             ---HHHhHHHHHHHHHHHHcChhhhhhHHHHHHHHHHHHHH
Confidence               11111112233457888999999999999988877543

>PRK11010 ampG muropeptide transporter; Validated

Probab=99.60  E-value=5.4e-12  Score=131.62  Aligned_cols=305  Identities=14%  Similarity=0.002  Sum_probs=170.3

Q ss_pred             HHHHHHhhhhhcchhccC-----CcHHH-HHHHHHHHHHHHHHHHHHHHHHhccccccccchhHHHHHHHHHHHHHHHHH
Q 015168            6 KLILIVGGPLVGKLMDHS-----PRIPA-YICLNTVQAAAQLLSAAMIIHAHTVIPTSSSMLLHPWFFVLVLAGAVERLT   79 (412)
Q Consensus         6 ~lp~ll~g~~~G~~vDr~-----~R~~v-~~~~~~~q~~~v~~s~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~l~   79 (412)
                      .+|+ .+.+..|.++||+     +|||. +..+.+.-.+    +..  ...+.. +. + .. +.++...++.+......
T Consensus        56 ~~~~-~~~~l~gpl~Dr~~~~~~Grrr~~ll~~~i~~~~----~~~--~~a~~~-~~-~-~l-~~l~~~~~l~~~~~a~~  124 (491)
T PRK11010         56 GQAY-VFKFLWSPLMDRYTPPFLGRRRGWLLATQLLLLV----AIA--AMGFLE-PG-T-QL-RWLAALAVVIAFCSASQ  124 (491)
T ss_pred             HHHH-HHHHHHHHHHHcccccCCCCchHHHHHHHHHHHH----HHH--HHHHcC-Cc-c-hH-HHHHHHHHHHHHHHHHH
Confidence            3444 5788899999998     77775 5555442211    111  111111 11 1 02 22333344455555555


Q ss_pred             hhhhhhhhcccceeeecCCCchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHh-hcChhHHHHHHHHHHHHHHHHHHHHHH
Q 015168           80 GVALGVAVERDWAVLLAGINRPIALAKANAVLNRIDLLCEIAGASLFGILLS-KYEPVTCLKFAAGLIMWSLPVMIILTW  158 (412)
Q Consensus        80 ~~a~~~ai~RDwv~~l~~~~~~~~L~~~Ns~l~~id~v~~llgP~lgG~L~~-~~~~~~~~~~~~~~~~~s~~~~~~~l~  158 (412)
                      +.+.+ ++.-|    .++++   +..+.|+.......++.++||.+++.+.+ ..||+..|++.+....+...     . 
T Consensus       125 ~i~~~-a~~~~----~~~~~---~rg~~~~i~~~g~~lG~llg~~l~~~l~~~~~GWr~~f~i~a~l~ll~~l-----~-  190 (491)
T PRK11010        125 DIVFD-AWKTD----VLPAE---ERGAGAAISVLGYRLAMLVSGGLALWLADRYLGWQGMYWLMAALLIPCII-----A-  190 (491)
T ss_pred             HHHHH-HHHHH----hcChh---hhHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCHHHHHHHHHHHHHHHHH-----H-
Confidence            54443 23334    45543   68899999999999999999999999999 57999998775544433321     1 


Q ss_pred             HhhhccccccccccccccccCCCCCCCCCCchhhhHHhHHHHHHhHHHHhcCCcchHHHHHHHHHHHhhhccchHHHHHH
Q 015168          159 FTNKISSGVLDRAKCSQSCCRTSNEGPVPDADNIVDVGIEAIKLGWKEYMQQPVLPASLAYVLLCLNVVLTPGSLMTAFL  238 (412)
Q Consensus       159 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~v~~~~~~~a~l~~t~v~~~~~~~~~y~  238 (412)
                      .. .++|+.  ++++.     +    +  +       ..+...+.++.++++|..+..+....++.............|+
T Consensus       191 ~~-~~~e~~--~~~~~-----~----~--~-------~~~~~~~~l~~~~~~~~~~~~ll~~~l~~~~~~~~~~~~~~~l  249 (491)
T PRK11010        191 TL-LAPEPT--DTIPV-----P----K--T-------LEQAVVAPLRDFFGRNNAWLILLLIVLYKLGDAFAMSLTTTFL  249 (491)
T ss_pred             HH-hcCCCc--ccccc-----c----c--c-------hhhhHHHHHHHHHcCcCHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            11 234321  10000     0    0  0       0011234566677777655443333344110112223344565


Q ss_pred             -HhcCCCCchhHHHh-hHHHHHHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHHhcCCCcCcchH--HHHHHH
Q 015168          239 -TQRGLNPSIIGGFS-GLCASMGVAATFLSAYLVRRLGILKAGAAGLIFQASLLAMAVAVYWSGSLSQQNPL--LFFLCL  314 (412)
Q Consensus       239 -~~~gls~~~~G~~~-~~~avggllGt~l~~~l~~R~g~~r~~~~~~~~~~~~l~~~v~~~~~g~~~~~~~~--~l~~~g  314 (412)
                       +++|+|+.++|... ..+.++++.|+++.+++.+|+|.+|...++...+.+...........++ + ...+  ..++..
T Consensus       250 ~~~~G~s~~~~g~~~~~~g~i~~iiG~ll~G~L~dr~g~~~~l~i~~~l~~l~~l~~~~l~~~~~-~-~~~l~~~~~l~~  327 (491)
T PRK11010        250 IRGVGFDAGEVGLVNKTLGLLATIVGALYGGILMQRLSLFRALMIFGILQGVSNAGYWLLSITDK-N-LYSMGAAVFFEN  327 (491)
T ss_pred             HHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhccc-c-HHHHHHHHHHHH
Confidence             46899999999998 5777899999999999999999988776655444332222111111111 1 1111  111100


Q ss_pred             HHHhhhhhhhhhhhhhHHhhccCCcccchhHHHHHHHHHHHHHHHHHHH
Q 015168          315 IVLSRLGHMSYDIVGAQILQTGIPSSKANLIGTTEISVASLVESVMLGV  363 (412)
Q Consensus       315 ~~~sr~GLw~~dl~~~~l~Q~~vp~~~~G~v~g~~~sl~~~~~ll~~~~  363 (412)
                      +   ..|+  .......+..+.++++..|+..|..+++.+....+...+
T Consensus       328 ~---~~g~--~~~~~~a~~~~l~~~~~~~t~~gl~~s~~~lg~~~~~~~  371 (491)
T PRK11010        328 L---CGGM--GTAAFVALLMTLCNKSFSATQFALLSALSAVGRVYVGPV  371 (491)
T ss_pred             H---HHHH--HHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHHHHHHHH
Confidence            0   1122  223345667778899999999999999887755433333

>PRK11663 regulatory protein UhpC; Provisional

Probab=99.60  E-value=2.3e-12  Score=132.03  Aligned_cols=325  Identities=9%  Similarity=-0.107  Sum_probs=167.4

Q ss_pred             hHHHHHHhhhhhcchhccCCcHHHHHHHHHHHHHHHHHHHHHHHHHhccccccccchhHHHHHHHHHHHHHHHHHhhhhh
Q 015168            5 SKLILIVGGPLVGKLMDHSPRIPAYICLNTVQAAAQLLSAAMIIHAHTVIPTSSSMLLHPWFFVLVLAGAVERLTGVALG   84 (412)
Q Consensus         5 ~~lp~ll~g~~~G~~vDr~~R~~v~~~~~~~q~~~v~~s~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~l~~~a~~   84 (412)
                      ..++..+.+++.|.+.||++||+++..+.+.-.+.    +.  +..+...      . +.+++.-++.|...........
T Consensus        67 ~~~~~~~~~~~~G~l~dr~g~r~~~~~~~~~~~~~----~~--~~~~~~~------~-~~l~~~~~l~g~~~g~~~~~~~  133 (434)
T PRK11663         67 FYITYGVSKFVSGIVSDRSNARYFMGIGLIATGII----NI--LFGFSSS------L-WAFALLWVLNAFFQGWGWPVCA  133 (434)
T ss_pred             HHHHHHHHHhhhhHHHhhcCCchhHHHHHHHHHHH----HH--HHHHHhH------H-HHHHHHHHHHHHHHHccchHHH
Confidence            45678889999999999999999987775532211    11  1111110      1 2233333334444433333322


Q ss_pred             hhhcccceeeecCCCchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhcChhHHHHHHHHHHHHHHHHHHHHHHHhhhcc
Q 015168           85 VAVERDWAVLLAGINRPIALAKANAVLNRIDLLCEIAGASLFGILLSKYEPVTCLKFAAGLIMWSLPVMIILTWFTNKIS  164 (412)
Q Consensus        85 ~ai~RDwv~~l~~~~~~~~L~~~Ns~l~~id~v~~llgP~lgG~L~~~~~~~~~~~~~~~~~~~s~~~~~~~l~~~~~~~  164 (412)
                       ++..|    .++++   +..++++.......++.+++|.++|.+....+|+..+.+.+........   ...   ..++
T Consensus       134 -~~~~~----~~~~~---~rg~~~~~~~~~~~~g~~~~~~~~~~l~~~~gw~~~f~~~~i~~~~~~~---~~~---~~~~  199 (434)
T PRK11663        134 -KLLTA----WYSRT---ERGGWWAIWNTAHNVGGALIPLVVGAIALHYGWRYGMMIAGIIAIVVGL---FLC---WRLR  199 (434)
T ss_pred             -HHHHH----hCCHH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHH---HHH---HHcC
Confidence             22234    34543   6888999999999999999999999999999999987654433322211   111   1223


Q ss_pred             cccccccccc--ccccCCCCCCCCCCchhhhHHhHHHHHHhHH-HHhcCCcchHHHH-HHHHHHHhhhccchHHHHHHH-
Q 015168          165 SGVLDRAKCS--QSCCRTSNEGPVPDADNIVDVGIEAIKLGWK-EYMQQPVLPASLA-YVLLCLNVVLTPGSLMTAFLT-  239 (412)
Q Consensus       165 ~~~l~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~-~~~~~~v~~~~~~-~a~l~~t~v~~~~~~~~~y~~-  239 (412)
                      |+...+..+.  ++..++++..++.+..      ..+..+-++ ..+++|.++.... ....++. ...+....+.|++ 
T Consensus       200 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~p~~l~~  272 (434)
T PRK11663        200 DKPQAMGLPSVGEWRHDALELAQQQEGA------GLSRKEILTKYVLLNPYIWLLSFSYVLVYVV-RAAINDWGNLYMSE  272 (434)
T ss_pred             CCHhhcCCCCcccccccccccchhcccc------CCChhhhHHHHHhcChHHHHHHHHHHHHHHH-HHHHHHHHHHHHHh
Confidence            2110000000  0000000000000000      001112222 3567776665332 2222222 1223344567775 


Q ss_pred             hcCCCCchhHHHhhHHHHHHHHHHHHHHHHHHHhch--hhHHHHHHHHHHHHHHHHHHHHhcCCCcCcchHHHHHHHHHH
Q 015168          240 QRGLNPSIIGGFSGLCASMGVAATFLSAYLVRRLGI--LKAGAAGLIFQASLLAMAVAVYWSGSLSQQNPLLFFLCLIVL  317 (412)
Q Consensus       240 ~~gls~~~~G~~~~~~avggllGt~l~~~l~~R~g~--~r~~~~~~~~~~~~l~~~v~~~~~g~~~~~~~~~l~~~g~~~  317 (412)
                      ++|+|+.+.+...+...+++++|.++.+++.+|+..  ++........-......+. ...+.. + .........++  
T Consensus       273 ~~g~s~~~a~~~~~~~~~~~~~g~~~~g~l~dr~~~~~r~~~~~~~~~~~~~~~~~~-~~~~~~-~-~~~~~~~~~~~--  347 (434)
T PRK11663        273 TLGVDLVTANSAVSMFELGGFIGALVAGWGSDKLFNGNRGPMNLIFAAGILLSVGSL-WLMPFA-S-YVMQAACFFTI--  347 (434)
T ss_pred             ccCCCHHHHHHHHHHHHHHHHHHHHHHhhhHHHhccCCccHHHHHHHHHHHHHHHHH-HHcccc-c-HHHHHHHHHHH--
Confidence            589999999999999999999999999999999832  2222111111011111111 111111 1 11111111111  


Q ss_pred             hhhhhhhhhhhhhHHhhccCCcccchhHHHHHHHHHHHHHHHHHHHHHhccC
Q 015168          318 SRLGHMSYDIVGAQILQTGIPSSKANLIGTTEISVASLVESVMLGVAIIAND  369 (412)
Q Consensus       318 sr~GLw~~dl~~~~l~Q~~vp~~~~G~v~g~~~sl~~~~~ll~~~~~~~~~~  369 (412)
                       .++...-.........|..|++++|+++|+.++..+....+.+.+.....+
T Consensus       348 -g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~p~~~g~l~~  398 (434)
T PRK11663        348 -GFFVFGPQMLIGMAAAECSHKEAAGAATGFVGLFAYLGAALSGYPLAKVLE  398 (434)
T ss_pred             -HHHHhhHHHHHHHHHHhcccHhhHHhHHHHHHHHHHHHHHHhcccHHHHHH
Confidence             111100011122345677789999999999999999866665555444333

>PRK10504 putative transporter; Provisional

Probab=99.59  E-value=6.3e-12  Score=129.61  Aligned_cols=318  Identities=12%  Similarity=0.002  Sum_probs=176.4

Q ss_pred             HHHHHHhhhhhcchhccCCcHHHHHHHHHHHHHHHHHHHHHHHHHhccccccccchhHHHHHHHHHHHHHHHHHhhhhhh
Q 015168            6 KLILIVGGPLVGKLMDHSPRIPAYICLNTVQAAAQLLSAAMIIHAHTVIPTSSSMLLHPWFFVLVLAGAVERLTGVALGV   85 (412)
Q Consensus         6 ~lp~ll~g~~~G~~vDr~~R~~v~~~~~~~q~~~v~~s~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~l~~~a~~~   85 (412)
                      .+...+..++.|.+.||++|||++..+.+.-.+.    ..  ...+...      . +.+++.-++.|........... 
T Consensus        55 ~~~~~~~~~~~g~l~d~~g~r~~~~~~~~~~~~~----~~--~~~~~~~------~-~~l~~~~~l~g~~~~~~~~~~~-  120 (471)
T PRK10504         55 VLTVAVMLPASGWLADRVGVRNIFFTAIVLFTLG----SL--FCALSGT------L-NELLLARVLQGVGGAMMVPVGR-  120 (471)
T ss_pred             HHHHHHHHHHHHHHHHHhchHHHHHHHHHHHHHH----HH--HHHHhCC------H-HHHHHHHHHHHhhhHHHHHHHH-
Confidence            4566778899999999999999987764432221    11  1112111      1 2233333444444433332222 


Q ss_pred             hhcccceeeecCCCchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhcChhHHHHHHHHHHHHHHHHHHHHHHHhhhccc
Q 015168           86 AVERDWAVLLAGINRPIALAKANAVLNRIDLLCEIAGASLFGILLSKYEPVTCLKFAAGLIMWSLPVMIILTWFTNKISS  165 (412)
Q Consensus        86 ai~RDwv~~l~~~~~~~~L~~~Ns~l~~id~v~~llgP~lgG~L~~~~~~~~~~~~~~~~~~~s~~~~~~~l~~~~~~~~  165 (412)
                      ++..|    .++++   +..+.++..+....++..+||.++|.+.+..+|+..|.+......+.....      ....|+
T Consensus       121 ~~~~~----~~~~~---~~~~~~~~~~~~~~~g~~~g~~~~g~l~~~~gw~~~f~~~~~~~~l~~~~~------~~~~~~  187 (471)
T PRK10504        121 LTVMK----IVPRE---QYMAAMTFVTLPGQVGPLLGPALGGLLVEYASWHWIFLINIPVGIIGAIAT------LMLMPN  187 (471)
T ss_pred             HHHHH----HcCHH---HHHHHHHHHHHHHHHHHHhhhHHHHHHHhhccHHHHHHHHHHHHHHHHHHH------HHhCCC
Confidence            22234    34432   678899999999999999999999999999999998876554444333211      111222


Q ss_pred             cccccccccccc---------------cCCCCCCCCCCchhhhHH------------hHHHHH-----HhHHHHhcCCcc
Q 015168          166 GVLDRAKCSQSC---------------CRTSNEGPVPDADNIVDV------------GIEAIK-----LGWKEYMQQPVL  213 (412)
Q Consensus       166 ~~l~~~~~~~~~---------------~~~~~~~~~~~~~~~~~~------------~~~~~~-----~g~~~~~~~~v~  213 (412)
                      ... ++++.+..               .++ ++..... ......            ..++..     -.+ .++|||.+
T Consensus       188 ~~~-~~~r~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~l~~~~~~  263 (471)
T PRK10504        188 YTM-QTRRFDLSGFLLLAVGMATLTLALDG-SKGLGLS-PLAIAGLVAVGVVALLLYLLHARNNNRALFSL-KLFRTRTF  263 (471)
T ss_pred             ccc-cCCCCChHHHHHHHHHHHHHHHHHhc-CCcCCcc-hHHHHHHHHHHHHHHHHHHHHHhcCCCCccCH-HHhcccch
Confidence            111 11110000               000 0000000 000000            000000     012 26788888


Q ss_pred             hHHHHHHHHHHHhhhccchHHHHHHHh-cCCCCchhHHHhhHHHHHHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHH
Q 015168          214 PASLAYVLLCLNVVLTPGSLMTAFLTQ-RGLNPSIIGGFSGLCASMGVAATFLSAYLVRRLGILKAGAAGLIFQASLLAM  292 (412)
Q Consensus       214 ~~~~~~a~l~~t~v~~~~~~~~~y~~~-~gls~~~~G~~~~~~avggllGt~l~~~l~~R~g~~r~~~~~~~~~~~~l~~  292 (412)
                      +..+...+++...........+.|.++ +|.++...|+......++.+.+..+.+++.+|+|.++...++.....+.   
T Consensus       264 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~l~~r~g~~~~~~~~~~~~~~~---  340 (471)
T PRK10504        264 SLGLAGSFAGRIGSGMLPFMTPVFLQIGLGFSPFHAGLMMIPMVLGSMGMKRIVVQVVNRFGYRRVLVATTLGLALV---  340 (471)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCchHHHHHHHHHHHHH---
Confidence            876665555522112233345667764 8999999999999999999999999999999999988877665432222   


Q ss_pred             HHHHHhcCCCcCcchHHHHHHHHHHhhhhhhhhhhhhhHHhhccCCcccchhHHHHHHHHHHHHHHHH
Q 015168          293 AVAVYWSGSLSQQNPLLFFLCLIVLSRLGHMSYDIVGAQILQTGIPSSKANLIGTTEISVASLVESVM  360 (412)
Q Consensus       293 ~v~~~~~g~~~~~~~~~l~~~g~~~sr~GLw~~dl~~~~l~Q~~vp~~~~G~v~g~~~sl~~~~~ll~  360 (412)
                      +....+.+... ......  ...++.++|........+.+.++.+|++++|+.+|+.+..+.....+.
T Consensus       341 ~~~~~~~~~~~-~~~~~~--~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~ig  405 (471)
T PRK10504        341 SLLFMLVALLG-WYYLLP--FVLFLQGMVNSTRFSSMNTLTLKDLPDNLASSGNSLLSMIMQLSMSIG  405 (471)
T ss_pred             HHHHHhccccc-cHHHHH--HHHHHHHHHHHHHHHHHHHHHHHcCCHHhccchHHHHHHHHHHHHHHH
Confidence            11111211111 111111  111122223322445666778888999999999999999887744333

>TIGR00902 2A0127 phenyl proprionate permease family protein

Probab=99.59  E-value=2.5e-12  Score=129.40  Aligned_cols=215  Identities=14%  Similarity=0.124  Sum_probs=133.1

Q ss_pred             hhHHHHHHHHHHHHHHHHHHHHHHHHHHhhcChhHHHHHHHHHHHHHHHHHHHHHHHhhhccccccccccccccccCCCC
Q 015168          103 ALAKANAVLNRIDLLCEIAGASLFGILLSKYEPVTCLKFAAGLIMWSLPVMIILTWFTNKISSGVLDRAKCSQSCCRTSN  182 (412)
Q Consensus       103 ~L~~~Ns~l~~id~v~~llgP~lgG~L~~~~~~~~~~~~~~~~~~~s~~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~  182 (412)
                      +..+..+.++..-.++.++||.++|.+.+..||+..+++.....+ ..   .  ...  ..+| +++++++.  +    +
T Consensus       125 ~~~~~~g~~~~~~slG~~~g~~l~g~l~~~~g~~~~f~~~~~~~~-~~---~--~~~--~~~~-~~~~~~~~--~----~  189 (382)
T TIGR00902       125 QFGLDYGKVRLIGSAAFIIGSALFGGLIGMFDEQNILAILTAGLA-FM---L--IGF--LIKP-TIPPKDAI--P----E  189 (382)
T ss_pred             HcCCCccHHHHHHHHHHHHHHHHHHHHHHHcChhHHHHHHHHHHH-HH---H--HHH--HcCC-CCCCCccc--c----c
Confidence            455678889999999999999999999999999988765322211 11   1  111  1122 11111110  0    0


Q ss_pred             CCCCCCchhhhHHhHHHHHHhHHHHhcCCcchHHHHHHHHHHHhhhccchHHHHHHHhcCCCCchhHHHhhHHHHHHHHH
Q 015168          183 EGPVPDADNIVDVGIEAIKLGWKEYMQQPVLPASLAYVLLCLNVVLTPGSLMTAFLTQRGLNPSIIGGFSGLCASMGVAA  262 (412)
Q Consensus       183 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~~v~~~~~~~a~l~~t~v~~~~~~~~~y~~~~gls~~~~G~~~~~~avggllG  262 (412)
                       ++  +      .    ..+.++..+|||.++.......++......+.+..+.|++++|.|+..+|.+.+.++++.+.+
T Consensus       190 -~~--~------~----~~~~~~~~l~~~~~~~~l~~~~l~~~~~~~~~~~~~~~l~~~g~s~~~~g~l~~~~~~~~i~~  256 (382)
T TIGR00902       190 -DE--S------Q----GDSAFIALLKNPMNLRFLAAVCLIQGAHAAYYGFSAIYWQAAGISASATGLLWGIGVLAEIII  256 (382)
T ss_pred             -cc--c------c----cchhHHHHHcChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHhHHHHHHHHHHHHHHHH
Confidence             00  0      0    012466788999887755444443211234455567788889999999999999999999999


Q ss_pred             HHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHHhcCCCcCcchHHHHHHHHHHhhhhhhhhhhhhhHHhhccCCcccc
Q 015168          263 TFLSAYLVRRLGILKAGAAGLIFQASLLAMAVAVYWSGSLSQQNPLLFFLCLIVLSRLGHMSYDIVGAQILQTGIPSSKA  342 (412)
Q Consensus       263 t~l~~~l~~R~g~~r~~~~~~~~~~~~l~~~v~~~~~g~~~~~~~~~l~~~g~~~sr~GLw~~dl~~~~l~Q~~vp~~~~  342 (412)
                      ....+++.+|+|.++...++.....+.....  .+.+ .    .........+-...+|+  +-.+..++.|+. |++++
T Consensus       257 ~~~~~~l~~r~g~~~~l~~~~~~~~~~~~~~--~~~~-~----~~~~~~~q~l~g~~~~~--~~~~~~~~i~~~-~~~~~  326 (382)
T TIGR00902       257 FAFSNKLFQNCSARDLLLISAIACVGRWAII--GAIE-A----FPLIFLLQILHCGTFAV--CHLAAMRYIAAQ-PGSEI  326 (382)
T ss_pred             HHHhHHHHhhCCHHHHHHHHHHHHHHHHHHH--HhHh-h----HHHHHHHHHHHHHHHHH--HHHHHHHHHHhC-CHhhH
Confidence            9999999999999998877765433222211  2211 1    11111111111112344  445566677777 99999


Q ss_pred             hhHHHHHHHHHHH
Q 015168          343 NLIGTTEISVASL  355 (412)
Q Consensus       343 G~v~g~~~sl~~~  355 (412)
                      ++..++++++.++
T Consensus       327 ~~~q~~~~~~~~g  339 (382)
T TIGR00902       327 AKLQALYNALAMG  339 (382)
T ss_pred             HHHHHHHHHHHHH
Confidence            9999998876655

This family of proteins is involved in the uptake of 3-phenylpropionic acid. This uptake mechanism is for the metabolism of phenylpropanoid compounds and plays an important role in the natural degradative cycle of these aromatic molecules.

>TIGR00711 efflux_EmrB drug resistance transporter, EmrB/QacA subfamily

Probab=99.58  E-value=2.7e-12  Score=132.31  Aligned_cols=324  Identities=12%  Similarity=0.039  Sum_probs=179.7

Q ss_pred             hHHHHHHhhhhhcchhccCCcHHHHHHHHHHHHHHHHHHHHHHHHHhccccccccchhHHHHHHHHHHHHHHHHHhhhhh
Q 015168            5 SKLILIVGGPLVGKLMDHSPRIPAYICLNTVQAAAQLLSAAMIIHAHTVIPTSSSMLLHPWFFVLVLAGAVERLTGVALG   84 (412)
Q Consensus         5 ~~lp~ll~g~~~G~~vDr~~R~~v~~~~~~~q~~~v~~s~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~l~~~a~~   84 (412)
                      ..++.++..++.|.+.||++||+++..+.+...+.    ..  .......      . +.+++.-++.|...........
T Consensus        46 ~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~----~~--~~~~~~~------~-~~l~~~~~~~G~~~~~~~~~~~  112 (485)
T TIGR00711        46 YMLANAISIPLTGWLAKRFGTRRLFLISTFAFTLG----SL--LCGVAPN------L-ELMIIFRVIQGFGGGPLIPLSF  112 (485)
T ss_pred             HHHHHHHHHHhHHHHHHHhCcHHHHHHHHHHHHHH----HH--HHhCcCC------H-HHHHHHHHHHHhhhhhHHHHHH
Confidence            45677888999999999999999988886644332    11  1111111      1 2333334445554444443333


Q ss_pred             hhhcccceeeecCCCchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhcChhHHHHHHHHHHHHHHHHHHHHHHHhhhcc
Q 015168           85 VAVERDWAVLLAGINRPIALAKANAVLNRIDLLCEIAGASLFGILLSKYEPVTCLKFAAGLIMWSLPVMIILTWFTNKIS  164 (412)
Q Consensus        85 ~ai~RDwv~~l~~~~~~~~L~~~Ns~l~~id~v~~llgP~lgG~L~~~~~~~~~~~~~~~~~~~s~~~~~~~l~~~~~~~  164 (412)
                      . +..|    .++++   +..++++.......++..+||.++|.+.+..+|+..+++......+....      .....|
T Consensus       113 ~-~i~~----~~~~~---~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~w~~~f~~~~~~~~~~~~~------~~~~~~  178 (485)
T TIGR00711       113 S-TLLN----IYPPE---KRGRAMAIWGLTVLVAPALGPTLGGWIIENYHWRWIFLINVPIGIIVVVV------AFFILP  178 (485)
T ss_pred             H-HHHH----HCCHH---HHHHHHHHHHHHHHHHhhhhhccHhHhccCcCceehhhhhhHHHHHHHHH------HHHHcC
Confidence            2 2234    45542   67889999999999999999999999999999999887654444333321      111223


Q ss_pred             ccccccccccccc----------------cCCCCCCCCCCchhhhHH-----------hHHHHH-----HhHHHHhcCCc
Q 015168          165 SGVLDRAKCSQSC----------------CRTSNEGPVPDADNIVDV-----------GIEAIK-----LGWKEYMQQPV  212 (412)
Q Consensus       165 ~~~l~~~~~~~~~----------------~~~~~~~~~~~~~~~~~~-----------~~~~~~-----~g~~~~~~~~v  212 (412)
                      |+..+++++.+..                .+.++++...+ .+....           ..++.+     ..+ ..+++|.
T Consensus       179 ~~~~~~~~~~d~~g~~l~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~  256 (485)
T TIGR00711       179 RDKPAASENFDFLGLLLLSVGLGSLLYGLSEGPERGWFDS-NEILILSITGLVAIIAFVVWELTDDNPLVDL-RLFKYRN  256 (485)
T ss_pred             CccccccCCCcHHHHHHHHHHHHHHHHHHhhCCCCCCCCc-hHHHHHHHHHHHHHHHHHHHHHcCCCCccCH-HHHcCCC
Confidence            3111110100000                00000000000 000000           000000     011 2466776


Q ss_pred             chHHHHHHHHH-HHhhhccchHHHHHHHh-cCCCCchhHHHhhHHHHHHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHH
Q 015168          213 LPASLAYVLLC-LNVVLTPGSLMTAFLTQ-RGLNPSIIGGFSGLCASMGVAATFLSAYLVRRLGILKAGAAGLIFQASLL  290 (412)
Q Consensus       213 ~~~~~~~a~l~-~t~v~~~~~~~~~y~~~-~gls~~~~G~~~~~~avggllGt~l~~~l~~R~g~~r~~~~~~~~~~~~l  290 (412)
                      +........++ +. ........+.|+++ .|+++.+.|+......++.++++.+.+++.+|+|+++...++........
T Consensus       257 ~~~~~~~~~~~~~~-~~~~~~~~p~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~~r~~~~~~~~~g~~~~~~~~  335 (485)
T TIGR00711       257 FTIGCVYMSLLGLG-LYGSFYLLPLYLQQVLGYTALQAGLHILPVGLAPMLSSPIAGRMGDKIDPRKLVTIGLILYAVGF  335 (485)
T ss_pred             hHHHHHHHHHHHHH-HHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCcHHHHHHHHHHHHHHH
Confidence            66644333222 21 12223345667765 79999999999999999999999999999999999887766654322111


Q ss_pred             HHHHHHHhcCCCcCcchHHHHHHHHHHhhhhhhhhhhhhhHHhhccCCcccchhHHHHHHHHHHHHHHHHHHH
Q 015168          291 AMAVAVYWSGSLSQQNPLLFFLCLIVLSRLGHMSYDIVGAQILQTGIPSSKANLIGTTEISVASLVESVMLGV  363 (412)
Q Consensus       291 ~~~v~~~~~g~~~~~~~~~l~~~g~~~sr~GLw~~dl~~~~l~Q~~vp~~~~G~v~g~~~sl~~~~~ll~~~~  363 (412)
                      ..  ......+.   .+.........+.++|.-..........|+.+|++++|+++|+.+..++....+...+
T Consensus       336 ~~--~~~~~~~~---~~~~~~~~~~~l~g~g~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~ig~~i  403 (485)
T TIGR00711       336 YW--RAFTFTPD---TPFLAIALPQFIRGFGMGCFFMPLTTIALSGLPPHKIARGSSLSNFTRQLGGSIGTAL  403 (485)
T ss_pred             HH--HhccCCCC---CCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHhHHHHHHHHHHHHHHHHHHHH
Confidence            11  11111110   1111111122222334333445566677888999999999999999998755444433

This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 14 potential membrane-spanning regions. Members with known activities include EmrB (multiple drug resistance efflux pump) in E. coli, FarB (antibacterial fatty acid resistance) in Neisseria gonorrhoeae, TcmA (tetracenomycin C resistance) in Streptomyces glaucescens, etc. In most cases, the efflux pump is described as having a second component encoded in the same operon, such as EmrA of E. coli.

>PRK03893 putative sialic acid transporter; Provisional

Probab=99.58  E-value=4e-12  Score=131.70  Aligned_cols=326  Identities=13%  Similarity=0.100  Sum_probs=172.5

Q ss_pred             HHHHHHhhhhhcchhccCCcHHHHHHHHHHHHHHHHHHHHHHHHHhccccccccchhHHHHHHHHHHHHHHHHHhhhhhh
Q 015168            6 KLILIVGGPLVGKLMDHSPRIPAYICLNTVQAAAQLLSAAMIIHAHTVIPTSSSMLLHPWFFVLVLAGAVERLTGVALGV   85 (412)
Q Consensus         6 ~lp~ll~g~~~G~~vDr~~R~~v~~~~~~~q~~~v~~s~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~l~~~a~~~   85 (412)
                      .+...+.+++.|.+.||++||+++..+.+...+.    +.  ...+..       ..+.+++..++.|............
T Consensus        65 ~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~----~~--~~~~~~-------~~~~l~~~~~l~G~~~~~~~~~~~~  131 (496)
T PRK03893         65 FISRWFGGLLLGAMGDRYGRRLAMVISIVLFSVG----TL--ACGFAP-------GYWTLFIARLVIGMGMAGEYGSSAT  131 (496)
T ss_pred             HHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHH----HH--HHHHHh-------HHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            4566778899999999999999988776544332    11  111111       1123444444555554444333332


Q ss_pred             hhcccceeeecCCCchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhcChhHHHHHHHHHHHHHHHHHHHHHHHhhhccc
Q 015168           86 AVERDWAVLLAGINRPIALAKANAVLNRIDLLCEIAGASLFGILLSKYEPVTCLKFAAGLIMWSLPVMIILTWFTNKISS  165 (412)
Q Consensus        86 ai~RDwv~~l~~~~~~~~L~~~Ns~l~~id~v~~llgP~lgG~L~~~~~~~~~~~~~~~~~~~s~~~~~~~l~~~~~~~~  165 (412)
                      .+ .|    .++++   +..+.++.......++.+++|.+++.+....+|+..+++.+    +.....   +....+.||
T Consensus       132 ~~-~~----~~~~~---~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~w~~~f~~~~----~~~~~~---~~~~~~~p~  196 (496)
T PRK03893        132 YV-IE----SWPKH---LRNKASGFLISGFSIGAVVAAQVYSLVVPVWGWRALFFIGI----LPIIFA---LWLRKNLPE  196 (496)
T ss_pred             HH-HH----HcCHH---HHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCHHHHHHHHH----HHHHHH---HHHHHhCCC
Confidence            22 23    45543   68889999999999999999999999999999998875422    211111   111234444


Q ss_pred             cccccccccccccCCCCCCCCCCchhhh----HHhHH---------HHHHhHHHHh------------------------
Q 015168          166 GVLDRAKCSQSCCRTSNEGPVPDADNIV----DVGIE---------AIKLGWKEYM------------------------  208 (412)
Q Consensus       166 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~---------~~~~g~~~~~------------------------  208 (412)
                      +... ++++ +. ++    ...+..+..    +....         .....+....                        
T Consensus       197 ~~~~-~~~~-~~-~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  269 (496)
T PRK03893        197 AEDW-KEKH-AG-KA----PVRTMVDILYRGEHRIINILLTLAAAAALWFCFAGNLQNAAIVAVLGLLCAAIFISFMVQS  269 (496)
T ss_pred             chhh-hhhc-cc-cc----cchhHHHHHhcchhHHHHHHHHHHHHHHHHHHHHhhhcchhHHHHHHHHHHHHHHHHHHHh
Confidence            2110 0000 00 00    000000000    00000         0000000000                        


Q ss_pred             ---cCCcchHHHHHHHHH-HHhhhccchHHHHHHH-hcCCCCchhHHHhhHHHHHHHHHHHHHHHHHHHhchhhHHHHHH
Q 015168          209 ---QQPVLPASLAYVLLC-LNVVLTPGSLMTAFLT-QRGLNPSIIGGFSGLCASMGVAATFLSAYLVRRLGILKAGAAGL  283 (412)
Q Consensus       209 ---~~~v~~~~~~~a~l~-~t~v~~~~~~~~~y~~-~~gls~~~~G~~~~~~avggllGt~l~~~l~~R~g~~r~~~~~~  283 (412)
                         +.|.+. .+.....+ +..........+.|++ ++|+++.+.|.+.....+++++|+.+.+++.+|+|+++....+.
T Consensus       270 ~~~~~~~~~-~~~~~~~~~~~~~~~~~~~lp~~l~~~~g~~~~~~g~~~~~~~~~~~~g~~~~g~l~dr~g~~~~~~~~~  348 (496)
T PRK03893        270 SGKRWPTGV-MLMVVVLFAFLYSWPIQALLPTYLKTDLGYDPHTVANVLFFSGFGAAVGCCVGGFLGDWLGTRKAYVCSL  348 (496)
T ss_pred             cccchhHHH-HHHHHHHHHHhccchHHHHHHHHHHhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHH
Confidence               000000 00000011 0000112235677886 68999999999999999999999999999999999988866554


Q ss_pred             HHHHHHHHHHHHHHhcCCCcCcchHHHHHHHHHHhhhhhhhhhhhhhHHhhccCCcccchhHHHHHHHHHHHHHHHHHHH
Q 015168          284 IFQASLLAMAVAVYWSGSLSQQNPLLFFLCLIVLSRLGHMSYDIVGAQILQTGIPSSKANLIGTTEISVASLVESVMLGV  363 (412)
Q Consensus       284 ~~~~~~l~~~v~~~~~g~~~~~~~~~l~~~g~~~sr~GLw~~dl~~~~l~Q~~vp~~~~G~v~g~~~sl~~~~~ll~~~~  363 (412)
                      ........   ......... ................|   .......+.|+.+|+++||++.|++.+.++....+...+
T Consensus       349 ~~~~~~~~---~~~~~~~~~-~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~lgp~l  421 (496)
T PRK03893        349 LISQLLII---PVFAIGGAN-VWVLGLLLFFQQMLGQG---ISGLLPKLIGGYFDTEQRAAGLGFTYNVGALGGALAPIL  421 (496)
T ss_pred             HHHHHHHH---HHhhccccH-HHHHHHHHHHHHHHhcc---cchhhHHHHHhhCCHHHhhcccchhhhhhhHHHHHHHHH
Confidence            33221111   111111111 01111111111011112   223455678999999999999999999998866666666


Q ss_pred             HHhccCCCchh
Q 015168          364 AIIANDVSHFG  374 (412)
Q Consensus       364 ~~~~~~~~~f~  374 (412)
                      .....+.....
T Consensus       422 ~g~l~~~~g~~  432 (496)
T PRK03893        422 GALIAQRLDLG  432 (496)
T ss_pred             HHHHhccCChH
Confidence            55544433333

>PRK10054 putative transporter; Provisional

Probab=99.58  E-value=2.6e-12  Score=130.12  Aligned_cols=314  Identities=12%  Similarity=-0.015  Sum_probs=176.5

Q ss_pred             HHHHHHhhhhhcchhccCCcHHHHHHHHHHHHHHHHHHHHHHHHHhccccccccchhHHHHHHHHHHHHHHHHHhhhhhh
Q 015168            6 KLILIVGGPLVGKLMDHSPRIPAYICLNTVQAAAQLLSAAMIIHAHTVIPTSSSMLLHPWFFVLVLAGAVERLTGVALGV   85 (412)
Q Consensus         6 ~lp~ll~g~~~G~~vDr~~R~~v~~~~~~~q~~~v~~s~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~l~~~a~~~   85 (412)
                      .+..+++.++.|.+.||++||+++..+.+...+.    ++  .+.+...      . +.+++...+.+.....+....+ 
T Consensus        53 ~~~~~~~~~~~G~l~Dr~g~k~~~~~~~~~~~~~----~~--~~~~~~~------~-~~~~~~~~~~g~~~~~~~~~~~-  118 (395)
T PRK10054         53 LTIGVVFSLGFGILADKFDKKRYMLLAITAFASG----FI--AIPLVNN------V-TLVVLFFALINCAYSVFSTVLK-  118 (395)
T ss_pred             HHHHHHHHHHHHHHHhhcCcchhHHHHHHHHHHH----HH--HHHHHhH------H-HHHHHHHHHHHHHHHHHHHHHH-
Confidence            3567788999999999999999988776644322    21  1222211      1 2233323334443333333222 


Q ss_pred             hhcccceeeecCCCchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhcChhHHHHHHHHHHHHHHHHHHHHHHHhhhccc
Q 015168           86 AVERDWAVLLAGINRPIALAKANAVLNRIDLLCEIAGASLFGILLSKYEPVTCLKFAAGLIMWSLPVMIILTWFTNKISS  165 (412)
Q Consensus        86 ai~RDwv~~l~~~~~~~~L~~~Ns~l~~id~v~~llgP~lgG~L~~~~~~~~~~~~~~~~~~~s~~~~~~~l~~~~~~~~  165 (412)
                          .|....++++   +..+.++.......++..+||.++|.+.. .+|+..|.+.+...++...    +..  ..+++
T Consensus       119 ----~~~~~~~~~~---~~~~~~g~~~~~~~lg~~igp~l~~~l~~-~g~~~~f~~~~~~~~i~~i----~~~--~~~~~  184 (395)
T PRK10054        119 ----AWFADNLSST---SKTKIFSLNYTMLNIGWTVGPPLGTLLVM-QSINLPFWLAAICSAFPLV----FIQ--IWVQR  184 (395)
T ss_pred             ----HHHHHhcCHh---HHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hccCcHHHHHHHHHHHHHH----HHH--HHHhc
Confidence                2444466643   78899999999999999999999999986 6899887654433333321    111  11222


Q ss_pred             cccccccccccccCCCCCCCCCCchhhhHHhHHHHHHhHHHHhcCCcchHHHHHHHHH-HHhhhccchHHHHHH---Hhc
Q 015168          166 GVLDRAKCSQSCCRTSNEGPVPDADNIVDVGIEAIKLGWKEYMQQPVLPASLAYVLLC-LNVVLTPGSLMTAFL---TQR  241 (412)
Q Consensus       166 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~v~~~~~~~a~l~-~t~v~~~~~~~~~y~---~~~  241 (412)
                      +.+  ++++          +  +     ++.     ...+..+|||.++.......++ +. ...+......|.   .+.
T Consensus       185 ~~~--~~~~----------~--~-----~~~-----~~~~~~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~~~~~~~~~  239 (395)
T PRK10054        185 SEK--AIAT----------E--T-----GSV-----WSPSVLLQDKALLWFTCSGFLASFV-SGAFASCISQYVMVVADS  239 (395)
T ss_pred             ccc--cccc----------c--h-----hhh-----hhhhhhccCceehHHHHHHHHHHHH-HHHhhhhHHHHHHHhccc
Confidence            111  0000          0  0     000     1235678889887744433332 11 111222234444   346


Q ss_pred             CCCCchhHHHhhHHHHHHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHHhcCCCcCcchHHHHHHHHHHhhhh
Q 015168          242 GLNPSIIGGFSGLCASMGVAATFLSAYLVRRLGILKAGAAGLIFQASLLAMAVAVYWSGSLSQQNPLLFFLCLIVLSRLG  321 (412)
Q Consensus       242 gls~~~~G~~~~~~avggllGt~l~~~l~~R~g~~r~~~~~~~~~~~~l~~~v~~~~~g~~~~~~~~~l~~~g~~~sr~G  321 (412)
                      +.++..+|.+...+++..+......+++.+|.+.++...++...........  .+..++    ...++  ...+...+|
T Consensus       240 ~~~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~l~~~~~~~~~~~~~~--~~~~~~----~~~~~--~~~~~~~~g  311 (395)
T PRK10054        240 DFAEKVVAVVLPVNAAMVVSLQYSVGRRLNAANIRPLMTAGTLCFVIGLVGF--IFSGNS----LLLWG--MSAAVFTVG  311 (395)
T ss_pred             chHHHHHHHHHHhhhhheeeehhHHHHHHccCCchhHHHHHHHHHHHHHHHH--HHcchH----HHHHH--HHHHHHHHH
Confidence            7888899999999998888888888899999998877666654322221111  111111    11111  122233344


Q ss_pred             hhhhhhhhhHHhhccCCcccchhHHHHHHHHHHHHHHHHHHHHHhccCCCchhHHHHHH
Q 015168          322 HMSYDIVGAQILQTGIPSSKANLIGTTEISVASLVESVMLGVAIIANDVSHFGFLATLS  380 (412)
Q Consensus       322 Lw~~dl~~~~l~Q~~vp~~~~G~v~g~~~sl~~~~~ll~~~~~~~~~~~~~f~~l~~~s  380 (412)
                      ....-.+.....++.+|++++|+..+.++....+..+...+.+.+...-.......+++
T Consensus       312 ~~~~~p~~~~~~~~~~p~~~~~~~~~~~~~~~~G~~~Gp~~~G~l~~~~g~~~~~~~~~  370 (395)
T PRK10054        312 EIIYAPGEYMLIDHIAPPGMKASYFSAQSLGWLGAAINPLVSGVILTTLPPWSLFVILA  370 (395)
T ss_pred             HHHHHhhHHHHHHHhCCcccceehHhHHHHHHHHHHHHHHHHHHHHHHcChhhHHHHHH
Confidence            43333455667888899999999998776333344455555555555444444444444

>TIGR02718 sider_RhtX_FptX siderophore transporter, RhtX/FptX family

Probab=99.58  E-value=1.1e-11  Score=124.74  Aligned_cols=235  Identities=17%  Similarity=0.070  Sum_probs=135.6

Q ss_pred             hhHHHHHHHHHHHHHHHHHHHHHHHHHHhhcChhHHHHHHHHHHHHHHHHHHHHHHHhhhccccccccccccccccCCCC
Q 015168          103 ALAKANAVLNRIDLLCEIAGASLFGILLSKYEPVTCLKFAAGLIMWSLPVMIILTWFTNKISSGVLDRAKCSQSCCRTSN  182 (412)
Q Consensus       103 ~L~~~Ns~l~~id~v~~llgP~lgG~L~~~~~~~~~~~~~~~~~~~s~~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~  182 (412)
                      +....|+.....-.++.++|+.+.|.+.+..||+..|++.+...++....      . ...+|++.+  +++        
T Consensus       130 ~~~~~~~~~~~g~~lG~~~g~~~~~~l~~~~gw~~~f~~~a~l~~~~~~~------~-~~~~~~~~~--~~~--------  192 (390)
T TIGR02718       130 TLAKGNAVQIAGVMIGFFGGGAGTLVLFGKFGQRPAFLLVACVPLASLVC------V-LWLKDRAVA--SPE--------  192 (390)
T ss_pred             hhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHH------H-HHcCCCCcC--ccc--------
Confidence            55667776666667778888888888999999999887765554443321      1 112221110  000        


Q ss_pred             CCCCCCchhhhHHhHHHHHHhHHHHhcCCcchHHHHHHHHHHHhhhccchHHHHHHHhcCCCCchhHHHhhHHH-HHHHH
Q 015168          183 EGPVPDADNIVDVGIEAIKLGWKEYMQQPVLPASLAYVLLCLNVVLTPGSLMTAFLTQRGLNPSIIGGFSGLCA-SMGVA  261 (412)
Q Consensus       183 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~~v~~~~~~~a~l~~t~v~~~~~~~~~y~~~~gls~~~~G~~~~~~a-vggll  261 (412)
                        +  + +    .    ..+.++.++|+|.++..+....++........+....|++++|+|++++|+..+..+ +.++.
T Consensus       193 --~--~-~----~----~~~~~~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~G~s~~~ig~~~~~~~~~~~~~  259 (390)
T TIGR02718       193 --A--P-L----A----RRASLFRFFRRPLAWSLLALALLSAMTAVSGFGLSKLYLVDAGWPLEWIGRLGMAGGAVTVLL  259 (390)
T ss_pred             --c--c-h----h----hHHHHHHHHcCcCHHHHHHHHHHHHHHHHHHHHHhhHHHHhcCCCHHHHHHHHhHHHHHHHHH
Confidence              0  0 0    0    112466788999887766555555221122334456788889999999999998876 57788


Q ss_pred             HHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHHhcCCCcCcchHHHHHHHHHHhhhhhhhhhhhhhHHhhccCCccc
Q 015168          262 ATFLSAYLVRRLGILKAGAAGLIFQASLLAMAVAVYWSGSLSQQNPLLFFLCLIVLSRLGHMSYDIVGAQILQTGIPSSK  341 (412)
Q Consensus       262 Gt~l~~~l~~R~g~~r~~~~~~~~~~~~l~~~v~~~~~g~~~~~~~~~l~~~g~~~sr~GLw~~dl~~~~l~Q~~vp~~~  341 (412)
                      |.++.+++.+|+|.+|...++...+................+ ..........+.....|. .+.......++...|+++
T Consensus       260 g~~~~g~l~~r~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~g~-~~~~~~~~~~~~~~~~~~  337 (390)
T TIGR02718       260 GCGGGAWLVRRAGLWRTFILGVGLAGSLALLWFAQAAFWLAP-GIAVAWSCSAFGSLITGI-TSVAIYTAFMRFAGDGDQ  337 (390)
T ss_pred             HHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHcccCC-cHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHhCcccc
Confidence            999999999999999988776654422221111111100000 111111111110001233 233333344444334589


Q ss_pred             chhHHHHHHHHHHHHHHHHHHHHHhccC
Q 015168          342 ANLIGTTEISVASLVESVMLGVAIIAND  369 (412)
Q Consensus       342 ~G~v~g~~~sl~~~~~ll~~~~~~~~~~  369 (412)
                      +|+..+.++++++....+...+.....+
T Consensus       338 ~g~~~~~~~~~~~lg~~~g~~~~G~l~~  365 (390)
T TIGR02718       338 AGTDVTAVQSTRDLGELIASSIAGYLTD  365 (390)
T ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            9999999999998866666655544443

RhtX from Sinorhizobium meliloti 2011 and FptX from Pseudomonas aeruginosa appear to be single polypeptide transporters, from the major facilitator family (see pfam07690) for import of siderophores as a means to import iron. This function was suggested by proximity to siderophore biosynthesis genes and then confirmed by study of knockout and heterologous expression phenotypes.

>TIGR00883 2A0106 metabolite-proton symporter

Probab=99.56  E-value=2.3e-12  Score=127.85  Aligned_cols=310  Identities=13%  Similarity=0.003  Sum_probs=156.9

Q ss_pred             HHHHHhhhhhcchhccCCcHHHHHHHHHHHHHHHHHHHHHHHHHhcccccc-ccchhHHHHHHHHHHHHHHHHHhhhhhh
Q 015168            7 LILIVGGPLVGKLMDHSPRIPAYICLNTVQAAAQLLSAAMIIHAHTVIPTS-SSMLLHPWFFVLVLAGAVERLTGVALGV   85 (412)
Q Consensus         7 lp~ll~g~~~G~~vDr~~R~~v~~~~~~~q~~~v~~s~~~~~~~~~~~~~~-~~~~~~~l~~~~~~~g~~~~l~~~a~~~   85 (412)
                      ++..+.+++.|.+.||++|||++..+.+...+.    +.  ...+...-.. ..+....+++.-++.|........+.. 
T Consensus        46 ~~~~i~~~~~G~l~dr~g~r~~l~~~~~~~~~~----~~--~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~~~~~~~~~-  118 (394)
T TIGR00883        46 LARPLGAIVFGHFGDRIGRKKTLVITLLMMGIG----TL--LIGLLPSYATIGIWAPILLLLARLIQGFSLGGEWGGAA-  118 (394)
T ss_pred             HHhhhHHHHhhhhhhhhhhHHHHHHHHHHHHHH----HH--HHhhCCChhhhHHHHHHHHHHHHHHHHhhccccccccH-
Confidence            344567889999999999999988886654332    21  1111111000 000000112222233333222222222 


Q ss_pred             hhcccceeeecCCCchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHh--------hcChhHHHHHHHHHHHHHHHHHHHHH
Q 015168           86 AVERDWAVLLAGINRPIALAKANAVLNRIDLLCEIAGASLFGILLS--------KYEPVTCLKFAAGLIMWSLPVMIILT  157 (412)
Q Consensus        86 ai~RDwv~~l~~~~~~~~L~~~Ns~l~~id~v~~llgP~lgG~L~~--------~~~~~~~~~~~~~~~~~s~~~~~~~l  157 (412)
                      +...|    .++++   +..+.++.......++.+++|.+++.+..        ..+|+..+.+......+..       
T Consensus       119 ~~~~~----~~~~~---~r~~~~~~~~~~~~~G~~i~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~-------  184 (394)
T TIGR00883       119 LYLAE----YAPPG---KRGFYGSFQQVGAPVGLLLAALTVLLLSYLLGDDALLEWGWRIPFLVSAVLVLIGL-------  184 (394)
T ss_pred             HHhhh----cCCcc---cchHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHhhccchHHHHHHHHHHHHHHH-------
Confidence            22223    45543   56778888888888888888888776643        4678877654333222221       


Q ss_pred             HHhhhccccccccccccccccCCCCCCCCCCchhhhHHhHHHHHHhHHHHhcCCc--chHHHHHHHHH-HHhhhccchHH
Q 015168          158 WFTNKISSGVLDRAKCSQSCCRTSNEGPVPDADNIVDVGIEAIKLGWKEYMQQPV--LPASLAYVLLC-LNVVLTPGSLM  234 (412)
Q Consensus       158 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~v--~~~~~~~a~l~-~t~v~~~~~~~  234 (412)
                      ....+.+|+ ++.++++  +  + ++   ++            .+.++..++++.  ++.......+. .. ........
T Consensus       185 ~~~~~~~~~-~~~~~~~--~--~-~~---~~------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~  242 (394)
T TIGR00883       185 YLRRNLEET-PVFEKAQ--E--K-HK---KK------------RGPIRETLTKHRKPFLLGLGLVIATTTT-FYLITTYL  242 (394)
T ss_pred             HHHHhcCCC-hhHHHHH--h--c-cc---cc------------cCCHHHHHHhchHHHHHHHHHHHHHHHH-HHHHHHHH
Confidence            111233331 1111100  0  0 00   00            011222333333  33322222222 11 12223345


Q ss_pred             HHHHH-hcCCCCchhHHHhhHHHHHHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHHhcCCCcCcchHHHHHH
Q 015168          235 TAFLT-QRGLNPSIIGGFSGLCASMGVAATFLSAYLVRRLGILKAGAAGLIFQASLLAMAVAVYWSGSLSQQNPLLFFLC  313 (412)
Q Consensus       235 ~~y~~-~~gls~~~~G~~~~~~avggllGt~l~~~l~~R~g~~r~~~~~~~~~~~~l~~~v~~~~~g~~~~~~~~~l~~~  313 (412)
                      +.|.+ ++|.++...+.......++++++..+.+++.+|+|+++...........+..... .......+  ...  +..
T Consensus       243 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~-~~~~~~~~--~~~--~~~  317 (394)
T TIGR00883       243 PTYLTQTLGLSANSALLVLMLSLILFFITIPLSGALSDRIGRRPVLIIFTVLAALLAVPLL-MALLDSGS--FTL--FFF  317 (394)
T ss_pred             HHHHHHhcCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhchHHHHHHHHHHHHHHHHHHH-HHHhcCCc--hHH--HHH
Confidence            66774 5899999999999999999999999999999999998876544332221111111 11111111  111  111


Q ss_pred             HHHHhhhhhhhhhhhhhHHhhccCCcccchhHHHHHHHHHH-HHHHHHHHHH
Q 015168          314 LIVLSRLGHMSYDIVGAQILQTGIPSSKANLIGTTEISVAS-LVESVMLGVA  364 (412)
Q Consensus       314 g~~~sr~GLw~~dl~~~~l~Q~~vp~~~~G~v~g~~~sl~~-~~~ll~~~~~  364 (412)
                      .......+............+|.+|+++||++.+....+.+ ....+.+.+.
T Consensus       318 ~~~~~g~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~g~~~~p~~~  369 (394)
T TIGR00883       318 LVLGLALIGGMYTGPMGSFLPELFPTEVRYTGASLAYNLAGAIFGGFAPYIA  369 (394)
T ss_pred             HHHHHHHHHHHHhhhHHHHHHHhCCccceeeEeeehhHhHHHHHhhHHHHHH
Confidence            11222222223455677888999999999999998655543 3332333333

This model represents the metabolite:H+ symport subfamily of the major facilitator superfamily (pfam00083), including citrate-H+ symporters, dicarboxylate:H+ symporters, the proline/glycine-betaine transporter ProP, etc.

>cd06174 MFS The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters

Probab=99.56  E-value=4.7e-12  Score=123.24  Aligned_cols=282  Identities=18%  Similarity=0.052  Sum_probs=178.6

Q ss_pred             hhHHHHHHhhhhhcchhccCCcHHHHHHHHHHHHHHHHHHHHHHHHHhccccccccchhHHHHHHHHHHHHHHHHHhhhh
Q 015168            4 FSKLILIVGGPLVGKLMDHSPRIPAYICLNTVQAAAQLLSAAMIIHAHTVIPTSSSMLLHPWFFVLVLAGAVERLTGVAL   83 (412)
Q Consensus         4 ~~~lp~ll~g~~~G~~vDr~~R~~v~~~~~~~q~~~v~~s~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~l~~~a~   83 (412)
                      ...++..+..++.|.+.||++|||.+..+.+...+....      .... .      ..+..++..++.|..........
T Consensus        42 ~~~~~~~~~~~~~g~~~d~~g~r~~~~~~~~~~~~~~~~------~~~~-~------~~~~~~~~~~l~g~~~~~~~~~~  108 (352)
T cd06174          42 AFSLGYALGSLLAGYLSDRFGRRRVLLLGLLLFALGSLL------LAFA-S------SLWLLLVGRFLLGLGGGALYPAA  108 (352)
T ss_pred             HHHHHHHHHHHhHHHHHHHhCCchhhHHHHHHHHHHHHH------HHHh-c------cHHHHHHHHHHHHcccccccHhH
Confidence            345778889999999999999999988887766443221      1111 1      11233444445555554444433


Q ss_pred             hhhhcccceeeecCCCchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhcChhHHHHHHHHHHHHHHHHHHHHHHHhhhc
Q 015168           84 GVAVERDWAVLLAGINRPIALAKANAVLNRIDLLCEIAGASLFGILLSKYEPVTCLKFAAGLIMWSLPVMIILTWFTNKI  163 (412)
Q Consensus        84 ~~ai~RDwv~~l~~~~~~~~L~~~Ns~l~~id~v~~llgP~lgG~L~~~~~~~~~~~~~~~~~~~s~~~~~~~l~~~~~~  163 (412)
                      .. +..|    .++++   +..+.++.......++..++|.+++.+.+..+|+..+++.....++.....    ...   
T Consensus       109 ~~-~~~~----~~~~~---~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~---  173 (352)
T cd06174         109 AA-LIAE----WFPPK---ERGRALGLFSAGFGLGALLGPLLGGLLAESLGWRWLFLILAILGLLLALLL----LFL---  173 (352)
T ss_pred             HH-HHHH----hCCcc---chhhhhhHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHH----HHH---
Confidence            32 2234    56653   788999999999999999999999999998899987765444333332110    000   


Q ss_pred             cccccccccccccccCCCCCCCCCCchhhhHHhHHHHHHhHHHHhcCCcchHHHHHHHHH-HHhhhccchHHHHHHHh-c
Q 015168          164 SSGVLDRAKCSQSCCRTSNEGPVPDADNIVDVGIEAIKLGWKEYMQQPVLPASLAYVLLC-LNVVLTPGSLMTAFLTQ-R  241 (412)
Q Consensus       164 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~v~~~~~~~a~l~-~t~v~~~~~~~~~y~~~-~  241 (412)
                                                    +                |.++........+ .. ...+....+.|.++ .
T Consensus       174 ------------------------------~----------------~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~  206 (352)
T cd06174         174 ------------------------------L----------------RLLLLLALAFFLLSFG-YYGLLTYLPLYLQEVL  206 (352)
T ss_pred             ------------------------------H----------------HHHHHHHHHHHHHHhH-HHHHHHHHHHHHHHhc
Confidence                                          0                1122211111111 11 12223335556665 4


Q ss_pred             CCCCchhHHHhhHHHHHHHHHHHHHHHHHHHhchhh-HHHHHHHHHHHHHHHHHHHHhcCCCcCcchHHHHHHHHHHhhh
Q 015168          242 GLNPSIIGGFSGLCASMGVAATFLSAYLVRRLGILK-AGAAGLIFQASLLAMAVAVYWSGSLSQQNPLLFFLCLIVLSRL  320 (412)
Q Consensus       242 gls~~~~G~~~~~~avggllGt~l~~~l~~R~g~~r-~~~~~~~~~~~~l~~~v~~~~~g~~~~~~~~~l~~~g~~~sr~  320 (412)
                      |.++.+.|...+...++.+.+..+.+++.+|+|.++ ....+.....++....  .. ...   ....   .........
T Consensus       207 ~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~--~~-~~~---~~~~---~~~~~~~g~  277 (352)
T cd06174         207 GLSAAEAGLLLSLFGLGGILGALLGGLLSDRLGRRRLLLLIGLLLAALGLLLL--AL-APS---LALL---LVALLLLGF  277 (352)
T ss_pred             CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHH--HH-hcc---HHHH---HHHHHHHHH
Confidence            999999999999999999999999999999999988 7666654332222211  11 111   0111   112222233


Q ss_pred             hhhhhhhhhhHHhhccCCcccchhHHHHHHHHHHHHHHHHHHHHHhccC
Q 015168          321 GHMSYDIVGAQILQTGIPSSKANLIGTTEISVASLVESVMLGVAIIAND  369 (412)
Q Consensus       321 GLw~~dl~~~~l~Q~~vp~~~~G~v~g~~~sl~~~~~ll~~~~~~~~~~  369 (412)
                      +............|+.+|+++||++.|..+..++....+.........+
T Consensus       278 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~g~l~~  326 (352)
T cd06174         278 GLGFAFPALLTLASELAPPEARGTASGLFNTFGSLGGALGPLLAGLLLD  326 (352)
T ss_pred             HHhccchhHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence            3334667888899999999999999999999999977777666655543

MFS proteins facilitate the transport across cytoplasmic or internal membranes of a variety of substrates including ions, sugar phosphates, drugs, neurotransmitters, nucleosides, amino acids, and peptides. They do so using the electrochemical potential of the transported substrates. Uniporters transport a single substrate, while symporters and antiporters transport two substrates in the same or in opposite directions, respectively, across membranes. MFS proteins are typically 400 to 600 amino acids in length, and the majority contain 12 transmembrane alpha helices (TMs) connected by hydrophilic loops. The N- and C-terminal halves of these proteins display weak similarity and may be the result of a gene duplication/fusion event. Based on kinetic studies and the structures of a few bacterial superfamily members, GlpT (glycerol-3

>PRK10133 L-fucose transporter; Provisional

Probab=99.56  E-value=9.2e-12  Score=128.01  Aligned_cols=307  Identities=11%  Similarity=0.013  Sum_probs=171.2

Q ss_pred             hhHHHHHHhhhhhcchhccCCcHHHHHHHHHHHHHHHHHHHHHHHHH-hccccccccchhHHHHHHHHHHHHHHHHHhhh
Q 015168            4 FSKLILIVGGPLVGKLMDHSPRIPAYICLNTVQAAAQLLSAAMIIHA-HTVIPTSSSMLLHPWFFVLVLAGAVERLTGVA   82 (412)
Q Consensus         4 ~~~lp~ll~g~~~G~~vDr~~R~~v~~~~~~~q~~~v~~s~~~~~~~-~~~~~~~~~~~~~~l~~~~~~~g~~~~l~~~a   82 (412)
                      ...+.+.+.+++.|.++||++|||++..+.++-.+.    +.  ... ....+     ..+.+++.-++.|......+++
T Consensus        69 ~~~~g~~i~~~~~g~l~dr~G~r~~l~~g~~~~~~~----~~--l~~~~~~a~-----~~~~ll~~r~l~G~g~g~~~~~  137 (438)
T PRK10133         69 AFYFGYFIIPIPAGILMKKLSYKAGIITGLFLYALG----AA--LFWPAAEIM-----NYTLFLVGLFIIAAGLGCLETA  137 (438)
T ss_pred             HHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHH----HH--HHHHHHhcC-----CHHHHHHHHHHHHHHHHHHHhh
Confidence            345678889999999999999999988886644332    21  111 11111     1123444455666666666665


Q ss_pred             hhhhhcccceeeecCCCchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHh-h-------------------------cChh
Q 015168           83 LGVAVERDWAVLLAGINRPIALAKANAVLNRIDLLCEIAGASLFGILLS-K-------------------------YEPV  136 (412)
Q Consensus        83 ~~~ai~RDwv~~l~~~~~~~~L~~~Ns~l~~id~v~~llgP~lgG~L~~-~-------------------------~~~~  136 (412)
                      ....+ +|    ..+++   +-.+..+..+....++..+||.+|+.+.. .                         .+|+
T Consensus       138 ~~~~v-~~----~~~~~---~~~~~~s~~~~~~~~G~~~g~~~g~~l~~~~~~~~~~~~~~~l~~~~~~~w~~~~~~~w~  209 (438)
T PRK10133        138 ANPFV-TV----LGPES---SGHFRLNLAQTFNSFGAIIAVVFGQSLILSNVPHQSQDVLDKMTPEQLSAYKHSLVLSVQ  209 (438)
T ss_pred             HHHHH-HH----hCChh---hHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccchhhhhccChhhHHHHHHHHHHHHH
Confidence            54433 35    43332   34445778888889999999999987761 1                         1233


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhhhccccccccccccccccCCCCCCCCCCchhhhHHhHHHHHHhHHHHhcCCcchHH
Q 015168          137 TCLKFAAGLIMWSLPVMIILTWFTNKISSGVLDRAKCSQSCCRTSNEGPVPDADNIVDVGIEAIKLGWKEYMQQPVLPAS  216 (412)
Q Consensus       137 ~~~~~~~~~~~~s~~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~v~~~~  216 (412)
                      ..|+....  ......   ++...++.||.+  .+++.          + ++        .++..+.++..+++|.++..
T Consensus       210 ~~f~~~~~--v~~~~~---~~~~~~~~p~~~--~~~~~----------~-~~--------~~~~~~~~~~ll~~~~~~~~  263 (438)
T PRK10133        210 TPYMIIVA--IVLLVA---LLIMLTKFPALQ--SDNHS----------D-AK--------QGSFSASLSRLARIRHWRWA  263 (438)
T ss_pred             HHHHHHHH--HHHHHH---HHHHHhcCCCCC--ccccc----------c-cc--------ccchhhhHHHHHhCchHHHH
Confidence            33321111  111111   111222333311  00100          0 00        01123456778899988765


Q ss_pred             HHHHHHHHHhhhccchHHHHHH-H-hcCCCCchhHHHhhHHHHHHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHH
Q 015168          217 LAYVLLCLNVVLTPGSLMTAFL-T-QRGLNPSIIGGFSGLCASMGVAATFLSAYLVRRLGILKAGAAGLIFQASLLAMAV  294 (412)
Q Consensus       217 ~~~a~l~~t~v~~~~~~~~~y~-~-~~gls~~~~G~~~~~~avggllGt~l~~~l~~R~g~~r~~~~~~~~~~~~l~~~v  294 (412)
                      .....++.............|+ + .+|+|+...|+.+....+++++|.++.+++.+|+|.+|...++........  ..
T Consensus       264 ~l~~~~~~~~~~~~~~~~~~~l~~~~~g~s~~~ag~~~~~~~~~~~vG~~~~g~l~~r~g~~~~l~~~~~~~~~~~--~~  341 (438)
T PRK10133        264 VLAQFCYVGAQTACWSYLIRYAVEEIPGMTAGFAANYLTGTMVCFFIGRFTGTWLISRFAPHKVLAAYALIAMALC--LI  341 (438)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHH--HH
Confidence            4443444221111111234564 3 479999999999999999999999999999999999998776654322111  11


Q ss_pred             HHHhcCCCcCcchHHHHHHHHHHhhhhhhhhhhhhhHHhhccCCcccchhHHHHHHHHHHHH-HHHHHHHHHhc
Q 015168          295 AVYWSGSLSQQNPLLFFLCLIVLSRLGHMSYDIVGAQILQTGIPSSKANLIGTTEISVASLV-ESVMLGVAIIA  367 (412)
Q Consensus       295 ~~~~~g~~~~~~~~~l~~~g~~~sr~GLw~~dl~~~~l~Q~~vp~~~~G~v~g~~~sl~~~~-~ll~~~~~~~~  367 (412)
                      ..+.++.   .....+.+.|+   ..|. +++...+...+.  .+++.|..+++.. ++... .++..+.+.+.
T Consensus       342 ~~~~~~~---~~~~~~~l~gl---g~~~-i~P~~~s~a~~~--~~~~~~~as~l~~-~~~~g~~~~~~i~G~l~  405 (438)
T PRK10133        342 SAFAGGH---VGLIALTLCSA---FMSI-QYPTIFSLGIKN--LGQDTKYGSSFIV-MTIIGGGIVTPVMGFVS  405 (438)
T ss_pred             HHHcCCh---HHHHHHHHHHH---HHHH-HHHHHHHHHHcc--cchhhccchhHHh-HHhccchHHHHHHHHHH
Confidence            1222221   11111222222   3355 677777777777  6667888988886 45443 33333444333

>TIGR00895 2A0115 benzoate transport

Probab=99.54  E-value=3e-12  Score=127.29  Aligned_cols=319  Identities=14%  Similarity=0.041  Sum_probs=171.7

Q ss_pred             hHHHHHHhhhhhcchhccCCcHHHHHHHHHHHHHHHHHHHHHHHHHhccccccccchhHHHHHHHHHHHHHHHHHhhhhh
Q 015168            5 SKLILIVGGPLVGKLMDHSPRIPAYICLNTVQAAAQLLSAAMIIHAHTVIPTSSSMLLHPWFFVLVLAGAVERLTGVALG   84 (412)
Q Consensus         5 ~~lp~ll~g~~~G~~vDr~~R~~v~~~~~~~q~~~v~~s~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~l~~~a~~   84 (412)
                      ..+..++.+++.|.+.||++||+++..+.+...+.    ..  ...+...      . +.+++..++.|...........
T Consensus        61 ~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~----~~--~~~~~~~------~-~~~~~~~~~~g~~~~~~~~~~~  127 (398)
T TIGR00895        61 GLIGMAFGALFFGPLADRIGRKRVLLWSILLFSVF----TL--LCALATN------V-TQLLILRFLAGLGLGGLMPNLN  127 (398)
T ss_pred             HHHHHHHHHHHhHHHHHHhhhHHHHHHHHHHHHHH----HH--HHHHccc------h-HHHHHHHHHHhcccccchhhHH
Confidence            34567788899999999999999988876544332    11  1111111      1 2233334444444433333322


Q ss_pred             hhhcccceeeecCCCchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhcChhHHHHHHHHHHHHHHHHHHHHHHHhhhcc
Q 015168           85 VAVERDWAVLLAGINRPIALAKANAVLNRIDLLCEIAGASLFGILLSKYEPVTCLKFAAGLIMWSLPVMIILTWFTNKIS  164 (412)
Q Consensus        85 ~ai~RDwv~~l~~~~~~~~L~~~Ns~l~~id~v~~llgP~lgG~L~~~~~~~~~~~~~~~~~~~s~~~~~~~l~~~~~~~  164 (412)
                       ++..|    .++++   +..+.++.......++..++|.++|.+.+..+|+..+++.+....+....      ....+|
T Consensus       128 -~~~~~----~~~~~---~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~------~~~~~~  193 (398)
T TIGR00895       128 -ALVSE----YAPKR---FRGTAVGLMFCGYPIGAAVGGFLAGWLIPVFGWRSLFYVGGIAPLLLLLL------LMRFLP  193 (398)
T ss_pred             -HHHHH----HcCHH---hhchhHhhHhhHHHHHHHHHHHHHHHHhhcccceeehhhhhhHHHHHHHH------HHHhCC
Confidence             23334    44432   67889999999999999999999999999999998776543333322211      111223


Q ss_pred             ccccc-ccccccc-----------ccCCCCCCCCCCchhhhHHhHHHHHHhHHHHhcCCcchHHHHHHHHH----HHhhh
Q 015168          165 SGVLD-RAKCSQS-----------CCRTSNEGPVPDADNIVDVGIEAIKLGWKEYMQQPVLPASLAYVLLC----LNVVL  228 (412)
Q Consensus       165 ~~~l~-~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~v~~~~~~~a~l~----~t~v~  228 (412)
                      |+... .+++.++           ..++.+ ...++ .   +...+...+-++..++++..+....+...+    +. ..
T Consensus       194 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~-~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~  267 (398)
T TIGR00895       194 ESIDFLVSKRPETVRRIVNAIAPQMQAEAQ-SALPE-Q---KATQGTKRSVFKALFQGKTARITVLLWLLYFMLLVG-VY  267 (398)
T ss_pred             CCChHHHhcCHHHHHHHHHHHHHhcccccc-ccccc-c---ccccchhhHHHHHHhcchhHHHHHHHHHHHHHHHHH-HH
Confidence            21100 0000000           000000 00000 0   000111122344445554444422222111    11 11


Q ss_pred             ccchHHHHHHHhcCCCCchhHHHhhHHHHHHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHHhcCCCcCcchH
Q 015168          229 TPGSLMTAFLTQRGLNPSIIGGFSGLCASMGVAATFLSAYLVRRLGILKAGAAGLIFQASLLAMAVAVYWSGSLSQQNPL  308 (412)
Q Consensus       229 ~~~~~~~~y~~~~gls~~~~G~~~~~~avggllGt~l~~~l~~R~g~~r~~~~~~~~~~~~l~~~v~~~~~g~~~~~~~~  308 (412)
                      ......+.|.+++|.++...|...+...+++++|.++.+++.+|+|.++........ .++...  .......   ....
T Consensus       268 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~-~~~~~~--~~~~~~~---~~~~  341 (398)
T TIGR00895       268 FLTNWLPKLMVELGFSLSLAATGGALFNFGGVIGSIIFGWLADRLGPRVTALLLLLG-AVFAVL--VGSTLFS---PTLL  341 (398)
T ss_pred             HHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcchHHHHHHHHHH-HHHHHH--HHHHhhC---HHHH
Confidence            112223344567899999999999999999999999999999999987433322211 111111  1111111   1111


Q ss_pred             HHHHHHHHHhhhhhhhhhhhhhHHhhccCCcccchhHHHHHHHHHHHHHHHHHHHHH
Q 015168          309 LFFLCLIVLSRLGHMSYDIVGAQILQTGIPSSKANLIGTTEISVASLVESVMLGVAI  365 (412)
Q Consensus       309 ~l~~~g~~~sr~GLw~~dl~~~~l~Q~~vp~~~~G~v~g~~~sl~~~~~ll~~~~~~  365 (412)
                      +.   ..++.+++..........+.++.+|+++||++.|+..+..+....+...+++
T Consensus       342 ~~---~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~g~~~~G  395 (398)
T TIGR00895       342 LL---LGAIAGFFVNGGQSGLYALMALFYPTAIRATGVGWAIGIGRLGAIIGPILAG  395 (398)
T ss_pred             HH---HHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHHHHHHHHhHH
Confidence            11   1111222333345567788899999999999999999998876665555443

>TIGR00892 2A0113 monocarboxylate transporter 1

Probab=99.54  E-value=5.1e-12  Score=130.40  Aligned_cols=365  Identities=9%  Similarity=0.023  Sum_probs=185.9

Q ss_pred             HHHhhhhhcchhccCCcHHHHHHHHHHHHHHHHHHHHHHHHHhccccccccchhHHHHHHH-HHHHHHHHHHhhhhhhhh
Q 015168            9 LIVGGPLVGKLMDHSPRIPAYICLNTVQAAAQLLSAAMIIHAHTVIPTSSSMLLHPWFFVL-VLAGAVERLTGVALGVAV   87 (412)
Q Consensus         9 ~ll~g~~~G~~vDr~~R~~v~~~~~~~q~~~v~~s~~~~~~~~~~~~~~~~~~~~~l~~~~-~~~g~~~~l~~~a~~~ai   87 (412)
                      ..+.+++.|.+.||++||+++..+.+.-.+.    +.  ...+...      . +.+++.. ++.|........... ++
T Consensus        67 ~~~~~~~~G~l~dr~g~r~~l~~~~~~~~~~----~~--~~~~~~~------~-~~l~~~~~~l~G~~~~~~~~~~~-~~  132 (455)
T TIGR00892        67 LYAGGPISSILVNRFGCRPVVIAGGLLASLG----MI--LASFSSN------V-IELYLTAGFITGLGLAFNFQPSL-TM  132 (455)
T ss_pred             HHHhhHHHHHHHHHcCchHHHHhhHHHHHHH----HH--HHHHhhh------H-HHHHHHHHHHHHhcchhhhhHHH-HH
Confidence            4567889999999999999988876543322    21  1112111      1 1222222 233433333222222 33


Q ss_pred             cccceeeecCCCchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhcChhHHHHHHHHHHHHHHHHHHHHHHHhhhccccc
Q 015168           88 ERDWAVLLAGINRPIALAKANAVLNRIDLLCEIAGASLFGILLSKYEPVTCLKFAAGLIMWSLPVMIILTWFTNKISSGV  167 (412)
Q Consensus        88 ~RDwv~~l~~~~~~~~L~~~Ns~l~~id~v~~llgP~lgG~L~~~~~~~~~~~~~~~~~~~s~~~~~~~l~~~~~~~~~~  167 (412)
                      ..||    +++    +..++++.......++..++|.++|.+....||+.+|++.....++....    ....++.++ .
T Consensus       133 ~~~~----~~~----~r~~a~g~~~~~~~~g~~~~~~l~~~l~~~~gwr~~f~~~~~~~~~~~v~----~~~~~~~~~-~  199 (455)
T TIGR00892       133 LGKY----FYR----RRPLANGLAMAGSPVFLSTLAPLNQYLFESFGWRGSFLILGGLLLHCCVC----GALMRPVGP-S  199 (455)
T ss_pred             HHHH----HHh----hHHHHHHHHHhcccHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHH----HHHhCCCCc-c
Confidence            3454    332    46788899888889999999999999999999999887654443332211    111112111 1


Q ss_pred             cccccccccccCCCCCCCCCCchhhhHHhHHHHHHhH-HHHhcCCcchHHHHHHHHHHHhhhccchHHHHHHHhcCCCCc
Q 015168          168 LDRAKCSQSCCRTSNEGPVPDADNIVDVGIEAIKLGW-KEYMQQPVLPASLAYVLLCLNVVLTPGSLMTAFLTQRGLNPS  246 (412)
Q Consensus       168 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~-~~~~~~~v~~~~~~~a~l~~t~v~~~~~~~~~y~~~~gls~~  246 (412)
                      .++.+..+++..+.+ .+.++..+  .+..++..+.. ..+++||.++..+....+..............|.+++|+++.
T Consensus       200 ~~~~~~~~~~~~~~~-~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~g~s~~  276 (455)
T TIGR00892       200 QRVSKSKSKEGLPPD-GSTKKLSK--KSTAEKINRFLDFSLFTHRGFLVYLSGNVIMFLGFFAPIIFLVPYAKDKGVDEY  276 (455)
T ss_pred             cccccccccccCCCC-Cccccccc--cchhhhhhhhcchHHhcCchHHHHHHHHHHHHHHccchHHHHHHHHHHcCCCHH
Confidence            000000000000000 00000000  01111222221 136788887764443332211012222345667778999999


Q ss_pred             hhHHHhhHHHHHHHHHHHHHHHHHHH--hchhhHHHHHHHHHHHHHHHHHHHHhcCCCcCcchHHHHHHHHHHhhhhhhh
Q 015168          247 IIGGFSGLCASMGVAATFLSAYLVRR--LGILKAGAAGLIFQASLLAMAVAVYWSGSLSQQNPLLFFLCLIVLSRLGHMS  324 (412)
Q Consensus       247 ~~G~~~~~~avggllGt~l~~~l~~R--~g~~r~~~~~~~~~~~~l~~~v~~~~~g~~~~~~~~~l~~~g~~~sr~GLw~  324 (412)
                      ..|.+.++.+++.+.+..+.+++.+|  ++.++...++...-...+......... .   ....+++   ....+++...
T Consensus       277 ~~g~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~l~~ll~~~~~-~---~~~~~i~---~~~~G~~~g~  349 (455)
T TIGR00892       277 EAAFLLSIIGFVDIFARPSCGLIAGLKWIRPHVQYLFSFALLFNGLTHLLCALAG-D---YTGLVIY---CIFFGLSFGS  349 (455)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhcccccCHHHHHHHHHHHHHHHHHHHHHHHhc-h---HHHHHHH---HHHHHHHhch
Confidence            99999999999999999999999876  333333332221111111111111111 1   1111111   1111223333


Q ss_pred             hhhhhhHHhhccCCcccchhHHHHHHHHHHHHHHHHHHHHHhccC-CCchh-HHHHHHHHHHHHHH-HHHHHH--hcCCC
Q 015168          325 YDIVGAQILQTGIPSSKANLIGTTEISVASLVESVMLGVAIIAND-VSHFG-FLATLSLLSVVGAA-WMFCHW--LLNPT  399 (412)
Q Consensus       325 ~dl~~~~l~Q~~vp~~~~G~v~g~~~sl~~~~~ll~~~~~~~~~~-~~~f~-~l~~~s~~~v~~~~-~~~~~~--~~~~~  399 (412)
                      .......+.++.+|++++|+..|+.++.++....+...+....-+ ..... ...+.++..+.++. ..+..+  .|+.+
T Consensus       350 ~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~lg~~igp~i~G~l~~~~g~~~~~f~~~~~~~li~~~~~~~~~~~~~~~~~  429 (455)
T TIGR00892       350 VGALLFEVLMDLVGAQRFSSAVGLVTIVECCAVLIGPPLAGRLVDATKNYKYIFYASGSIVVSAGLFLAIGNYINYRLLA  429 (455)
T ss_pred             HHHHHHHHHHHHhhHHHHhhHHhHHHHHHHHHHHccccceeeeehhcCCcchHHHHhhHHHHHHHHHHHHHHHHHHHHHH
Confidence            455667778888999999999999999998876666666554433 22222 22222222222222 122222  14445


Q ss_pred             ccCCcccccCC
Q 015168          400 DEQRSLFSFDP  410 (412)
Q Consensus       400 ~~~~~~~~~~~  410 (412)
                      .||++-..+|+
T Consensus       430 ~~~~~~~~~~~  440 (455)
T TIGR00892       430 KEQKAALEREG  440 (455)
T ss_pred             HHHHHHHhhcc
Confidence            66777776664

>TIGR00879 SP MFS transporter, sugar porter (SP) family

Probab=99.53  E-value=4.3e-12  Score=128.89  Aligned_cols=335  Identities=11%  Similarity=0.003  Sum_probs=171.7

Q ss_pred             hHHHHHHhhhhhcchhccCCcHHHHHHHHHHHHHHHHHHHHHHHHHhccccccccchhHHHHHHHHHHHHHHHHHhhhhh
Q 015168            5 SKLILIVGGPLVGKLMDHSPRIPAYICLNTVQAAAQLLSAAMIIHAHTVIPTSSSMLLHPWFFVLVLAGAVERLTGVALG   84 (412)
Q Consensus         5 ~~lp~ll~g~~~G~~vDr~~R~~v~~~~~~~q~~~v~~s~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~l~~~a~~   84 (412)
                      ..+...+.+++.|.+.||++||+++..+.+...+.    +.  +.......    ...+.+++.-++.|.......... 
T Consensus        80 ~~~~~~i~~~~~g~l~d~~grr~~~~~~~~~~~~~----~~--~~~~~~~~----~~~~~~~~~r~l~G~~~~~~~~~~-  148 (481)
T TIGR00879        80 FLVGGFIGALFAGWLSDRFGRKKSLLIIALLFVIG----AI--LMGLAAFA----LSVEMLIVGRVLLGIGVGIASALV-  148 (481)
T ss_pred             HHHHHHHHHHHhhHhhhhhhhHHHHHHHHHHHHHH----HH--HHHHhccc----cchHHHHHHHHHHHhhhhHHHhHH-
Confidence            45677889999999999999999988876654332    11  11111110    011233344445555444444433 


Q ss_pred             hhhcccceeeecCCCchhhhHHHHHHHHHHHHHHHHHHHHHH---HHHHhhcChhHHHHHHHHHHHHHHHHHHHHHHHhh
Q 015168           85 VAVERDWAVLLAGINRPIALAKANAVLNRIDLLCEIAGASLF---GILLSKYEPVTCLKFAAGLIMWSLPVMIILTWFTN  161 (412)
Q Consensus        85 ~ai~RDwv~~l~~~~~~~~L~~~Ns~l~~id~v~~llgP~lg---G~L~~~~~~~~~~~~~~~~~~~s~~~~~~~l~~~~  161 (412)
                      .++..|    .++++   +..++++.......++.+++|.++   +.+....+|+..+++.....+....       ...
T Consensus       149 ~~~i~~----~~~~~---~r~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~w~~~f~~~~~~~~~~~~-------~~~  214 (481)
T TIGR00879       149 PMYLSE----IAPKA---LRGALTSLYQLAITFGILVAYGFGSGKVSLNNTLGWRIPLGLQLIPAGLLFL-------GLF  214 (481)
T ss_pred             HHHHHc----cCChh---hhhhhhhHHHHHHHHHHHHHHHHHHHhhcCCCCccHHHHHHHHHHHHHHHHH-------HHh
Confidence            233335    55543   678889999888999999999999   7766778999887763332222221       111


Q ss_pred             hcccccc---ccccccc--cccCCCCCCCCCCc--hhhhHH-hH------HHHHHhHHHHhcCC--cchHHHHHHHHH-H
Q 015168          162 KISSGVL---DRAKCSQ--SCCRTSNEGPVPDA--DNIVDV-GI------EAIKLGWKEYMQQP--VLPASLAYVLLC-L  224 (412)
Q Consensus       162 ~~~~~~l---~~~~~~~--~~~~~~~~~~~~~~--~~~~~~-~~------~~~~~g~~~~~~~~--v~~~~~~~a~l~-~  224 (412)
                      .++|...   .+++..+  +..++.++...++.  .+.... ..      +...+.|+..++..  ..+..+....++ +
T Consensus       215 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  294 (481)
T TIGR00879       215 FLPESPRWLVGKGRVEEARKSLARLRGTSGEDKELLDELELIDIKRSIEKRSVQPSWGSLFSSTRRIRRRLFLGVVLQWF  294 (481)
T ss_pred             cCCCChHHHHHcCChHHHHHHHHHHhCCCCCcHHHHHHHHHHHHHHHHHHhhccccHHHHHhcCchhHHHHHHHHHHHHH
Confidence            2333110   0000000  00000000000000  000000 00      00001123333321  122222211111 1


Q ss_pred             Hhhhc---cchHHHHHHHhcCCCCchhHHHhhHHHHHHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHHhcCC
Q 015168          225 NVVLT---PGSLMTAFLTQRGLNPSIIGGFSGLCASMGVAATFLSAYLVRRLGILKAGAAGLIFQASLLAMAVAVYWSGS  301 (412)
Q Consensus       225 t~v~~---~~~~~~~y~~~~gls~~~~G~~~~~~avggllGt~l~~~l~~R~g~~r~~~~~~~~~~~~l~~~v~~~~~g~  301 (412)
                      .....   .....+.|.++.|+++...+.......++++.|+++.+++.+|+|+++...++.....++............
T Consensus       295 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  374 (481)
T TIGR00879       295 QQFTGINAIMYYSPTIFENAGVSTDHAFLVSIIVGAVNFAFTFVAIFLVDRFGRRPLLLIGAAGMAICLFVLGILGASFV  374 (481)
T ss_pred             HHHhCCeehHHHHHHHHHHcCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHhhccc
Confidence            10011   122234445678999988899999999999999999999999999988877665443333222211111111


Q ss_pred             CcC---cchHHHHHHHHHHhhhhhhhhhhhhhHHhhccCCcccchhHHHHHHHHHHHHHHHHHHHHH
Q 015168          302 LSQ---QNPLLFFLCLIVLSRLGHMSYDIVGAQILQTGIPSSKANLIGTTEISVASLVESVMLGVAI  365 (412)
Q Consensus       302 ~~~---~~~~~l~~~g~~~sr~GLw~~dl~~~~l~Q~~vp~~~~G~v~g~~~sl~~~~~ll~~~~~~  365 (412)
                      .+.   .....+....+.....+. .+......+.++..|+++||++.|..+..+++...+...+..
T Consensus       375 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~lg~~i~~~~~~  440 (481)
T TIGR00879       375 TGSSKSSGNVAIVFILLFIAFFAM-GWGPVPWVIVSEIFPLSLRPKGISIAVAANWLANFIVGFLFP  440 (481)
T ss_pred             CCcccchhHHHHHHHHHHHHHHHc-cccCeehhhhhccCChHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            000   011111111122222222 222334455688899999999999999999887666665543

This model represent the sugar porter subfamily of the major facilitator superfamily (pfam00083)

>PRK09528 lacY galactoside permease; Reviewed

Probab=99.52  E-value=6.2e-12  Score=127.92  Aligned_cols=306  Identities=11%  Similarity=0.025  Sum_probs=151.7

Q ss_pred             hHHHHHHhhhhhcchhccCCcHHHHHHHHHHHHHHHHHHHHHHHHHhccccccccchhHHHHHHHHHHHHHHHHHhhhhh
Q 015168            5 SKLILIVGGPLVGKLMDHSPRIPAYICLNTVQAAAQLLSAAMIIHAHTVIPTSSSMLLHPWFFVLVLAGAVERLTGVALG   84 (412)
Q Consensus         5 ~~lp~ll~g~~~G~~vDr~~R~~v~~~~~~~q~~~v~~s~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~l~~~a~~   84 (412)
                      ..+...++.++.|.+.||++|||++..+...-.....   ..........      .....+......+........+..
T Consensus        55 ~~l~~~i~~~~~G~l~Dr~g~r~~~~~~~~~~~~~~~---~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~  125 (420)
T PRK09528         55 NSLFALLFQPLYGLISDKLGLKKHLLWIISGLLVLFG---PFFIYVFAPL------LQYNILLGAIVGGIYLGFGFLAGA  125 (420)
T ss_pred             HHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHH---HHHHHHHHHH------HHHHHHHHHHHHHHHhhhhhccch
Confidence            4567889999999999999999998765432211100   0001111100      000011111111111111111111


Q ss_pred             hhhcccceeeecCCCchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhcChhHHHHHHHHHHHHHHHHHHHHHHHhhhcc
Q 015168           85 VAVERDWAVLLAGINRPIALAKANAVLNRIDLLCEIAGASLFGILLSKYEPVTCLKFAAGLIMWSLPVMIILTWFTNKIS  164 (412)
Q Consensus        85 ~ai~RDwv~~l~~~~~~~~L~~~Ns~l~~id~v~~llgP~lgG~L~~~~~~~~~~~~~~~~~~~s~~~~~~~l~~~~~~~  164 (412)
                      ..+ .+|.+..     +++.....+..+....++..++|.++|.+.. .+|+..+++.+...++...     . .....+
T Consensus       126 ~~~-~~~~~~~-----~~~~g~~~g~~~~~~~~g~~i~~~~~g~l~~-~~~~~~f~~~~~~~~~~~~-----~-~~~~~~  192 (420)
T PRK09528        126 GAI-EAYIERV-----SRRSGFEYGRARMWGSLGWALCAFIAGILFN-INPQINFWLGSGSALILLV-----L-LFFAKP  192 (420)
T ss_pred             hhh-hhHHHHH-----HhhccccchhhHHhhhHHHHHHHHHHHHHHh-cCchHhHHHHHHHHHHHHH-----H-Hhcccc
Confidence            122 2342211     1123345567777888999999999999986 4888776554333332221     1 111112


Q ss_pred             ccccccccccccccCCCCCCCCCCchhhhHHhHHHHHHhHHHHhcCCcchHHHHHHHHHHHhhhccchHHHHHHH----h
Q 015168          165 SGVLDRAKCSQSCCRTSNEGPVPDADNIVDVGIEAIKLGWKEYMQQPVLPASLAYVLLCLNVVLTPGSLMTAFLT----Q  240 (412)
Q Consensus       165 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~v~~~~~~~a~l~~t~v~~~~~~~~~y~~----~  240 (412)
                      | +.++++..    ++ ++++ ++     +.    ..+.++..+|||.++..+............++...+.|..    +
T Consensus       193 ~-~~~~~~~~----~~-~~~~-~~-----~~----~~~~~~~~l~~~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~  256 (420)
T PRK09528        193 D-APSTAKVA----NA-LGAN-AS-----AV----SLKDALALLKLPKFWFLVLYVIGVACFYDVFDQQFPNFFASFFAT  256 (420)
T ss_pred             c-ccchhhhc----cc-hhcc-cc-----cc----cHHHHHHHccCCCeEeehHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence            2 11100000    00 0000 00     00    1234556788887766332222211001222333555553    2


Q ss_pred             cCCCCchhHHHhhHHHHHHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHHhcCCCcCcchHHHHHHHHHHhhh
Q 015168          241 RGLNPSIIGGFSGLCASMGVAATFLSAYLVRRLGILKAGAAGLIFQASLLAMAVAVYWSGSLSQQNPLLFFLCLIVLSRL  320 (412)
Q Consensus       241 ~gls~~~~G~~~~~~avggllGt~l~~~l~~R~g~~r~~~~~~~~~~~~l~~~v~~~~~g~~~~~~~~~l~~~g~~~sr~  320 (412)
                      .+.+...+|.+.++..++...+.+..+++.+|+|.++...++.....+....  ..+.. +  + .....   ...+...
T Consensus       257 ~~~~~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~l~~~~~~l--~~~~~-~--~-~~~~~---~~~l~g~  327 (420)
T PRK09528        257 PEQGTRVFGYLNSFQVFLEALIMFFAPFIINRIGAKNALLLAGTIMAVRIIG--SGFAT-G--P-LEVSI---LKLLHAF  327 (420)
T ss_pred             cCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcchhhHHHHHHHHHHHHH--HHhcc-c--H-HHHHH---HHHHHHH
Confidence            4777788999999999999999999999999999998876655432221111  12211 1  1 11111   1111122


Q ss_pred             hhhhhhhhhhHHhhccCCcccchhHHHH-HHHHHHHHH
Q 015168          321 GHMSYDIVGAQILQTGIPSSKANLIGTT-EISVASLVE  357 (412)
Q Consensus       321 GLw~~dl~~~~l~Q~~vp~~~~G~v~g~-~~sl~~~~~  357 (412)
                      +.-........+.++..|++.+++..+. .++......
T Consensus       328 ~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~lg~  365 (420)
T PRK09528        328 EVPFLLVGVFKYITLNFDVRLSATIYLVGFQFAKQLGA  365 (420)
T ss_pred             HHHHHHHHHHHHHHHHcCccceeeeeeehHHHHHHHHH
Confidence            2222344556778888899999987655 444444333

>TIGR00712 glpT glycerol-3-phosphate transporter

Probab=99.52  E-value=2.2e-11  Score=124.77  Aligned_cols=328  Identities=11%  Similarity=0.003  Sum_probs=165.8

Q ss_pred             hHHHHHHhhhhhcchhccCCcHHHHHHHHHHHHHHHHHHHHHHHHHhccccccccchhHHHHHHHHHHHHHHHHHhhhhh
Q 015168            5 SKLILIVGGPLVGKLMDHSPRIPAYICLNTVQAAAQLLSAAMIIHAHTVIPTSSSMLLHPWFFVLVLAGAVERLTGVALG   84 (412)
Q Consensus         5 ~~lp~ll~g~~~G~~vDr~~R~~v~~~~~~~q~~~v~~s~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~l~~~a~~   84 (412)
                      ..+...+..++.|.+.||++||+++..+.+...+.    ..  ........ .+  ..+.+++..++.|...........
T Consensus        70 ~~~~~~~~~~~~G~l~dr~g~~~~~~~~~~~~~~~----~~--~~~~~~~~-~~--~~~~l~~~~~l~g~~~g~~~~~~~  140 (438)
T TIGR00712        70 ISIAYGFSKFIMGSVSDRSNPRVFLPAGLILSAAV----ML--LMGFVPWA-TS--SIAIMFVLLFLNGWFQGMGWPPCG  140 (438)
T ss_pred             HHHHHHHhhhccchhhhccCCceehHHHHHHHHHH----HH--HHhccccc-cc--hHHHHHHHHHHHHHHhhcchHHHH
Confidence            45667788899999999999999877775544332    11  11111000 01  111223333344444433332232


Q ss_pred             hhhcccceeeecCCCchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHh-hcChhHHHHHHHHHHHHHHHHHHHHHHHhhhc
Q 015168           85 VAVERDWAVLLAGINRPIALAKANAVLNRIDLLCEIAGASLFGILLS-KYEPVTCLKFAAGLIMWSLPVMIILTWFTNKI  163 (412)
Q Consensus        85 ~ai~RDwv~~l~~~~~~~~L~~~Ns~l~~id~v~~llgP~lgG~L~~-~~~~~~~~~~~~~~~~~s~~~~~~~l~~~~~~  163 (412)
                      ..+. |    .++++   +..++++.......++..++|.+.+.++. ..+|+.++++.....++.....   ..   .+
T Consensus       141 ~~i~-~----~~~~~---~rg~~~~~~~~~~~~g~~~~~~l~~~~~~~~~~w~~~f~~~~~~~~i~~~~~---~~---~~  206 (438)
T TIGR00712       141 RTMV-H----WWSQS---ERGTIVSIWNCAHNIGGGIPPLLVLLGMAWFNDWHAALYFPAICAIIVALFA---FA---MM  206 (438)
T ss_pred             HHHH-H----hcCcc---cchhHHHHHHHHHHhHhHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHH---HH---hc
Confidence            2222 3    45543   67889999888889999999888876555 4689998876544444432211   11   12


Q ss_pred             cccccccccccccccCCCCCCCCCCchhhhHHhHHHHHHh-HHHHhcCCcchHHHHHHHHHHHhhhccchHHHHHHHh-c
Q 015168          164 SSGVLDRAKCSQSCCRTSNEGPVPDADNIVDVGIEAIKLG-WKEYMQQPVLPASLAYVLLCLNVVLTPGSLMTAFLTQ-R  241 (412)
Q Consensus       164 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g-~~~~~~~~v~~~~~~~a~l~~t~v~~~~~~~~~y~~~-~  241 (412)
                      +|+..+++.++.+..+++.+++..++.   +... +..+- ++..+|||.++.......++.....++....+.|+++ .
T Consensus       207 ~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~  282 (438)
T TIGR00712       207 RDTPQSCGLPPIEEYRNDYPDDYNEKA---EQEL-TAKEIFMQYVLPNKLLWYIAIANVFVYLLRYGVLDWSPTYLKEVK  282 (438)
T ss_pred             cCCHHhcCCCCchhccccccccccccc---cccc-chHHHHHHHHccCchHHHHHHHHHHHHHHHHHHHHhHHHHHHHcc
Confidence            221100000000000000000000000   0000 11122 2346788888775433322211012223345677765 7


Q ss_pred             CCCCchhHHHhhHHHHHHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHHhcCCC-cCcch-HHHHHHHHHHhh
Q 015168          242 GLNPSIIGGFSGLCASMGVAATFLSAYLVRRLGILKAGAAGLIFQASLLAMAVAVYWSGSL-SQQNP-LLFFLCLIVLSR  319 (412)
Q Consensus       242 gls~~~~G~~~~~~avggllGt~l~~~l~~R~g~~r~~~~~~~~~~~~l~~~v~~~~~g~~-~~~~~-~~l~~~g~~~sr  319 (412)
                      |+|+...|+......+++++|+++.+++.+|++..|....+...... ....+..++..+. +.... ..++..     +
T Consensus       283 g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~-----g  356 (438)
T TIGR00712       283 HFALDKSSWAYFLYEYAGIPGTLLCGWMSDKVFKGNRGATGVFFMTL-VTIAVIVYWMNPAGNPLVDMICMIVI-----G  356 (438)
T ss_pred             CCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhccCcccHHHHHHHHH-HHHHHHHHHhcCCCchHHHHHHHHHH-----H
Confidence            99999999999999999999999999999999755432323221111 1111111121110 11111 111222     2


Q ss_pred             hhhhhhhhhhhHHhhccCCcccchhHHHHHHHHHHHHH-HHHHHHHH
Q 015168          320 LGHMSYDIVGAQILQTGIPSSKANLIGTTEISVASLVE-SVMLGVAI  365 (412)
Q Consensus       320 ~GLw~~dl~~~~l~Q~~vp~~~~G~v~g~~~sl~~~~~-ll~~~~~~  365 (412)
                      .+.+.-.........+..|+++||+++|+.++..+..+ .+...+..
T Consensus       357 ~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~gg~~~gp~l~G  403 (438)
T TIGR00712       357 FLIYGPVMLIGLHALELAPKKAAGTAAGFTGLFGYLGGSVAASAIVG  403 (438)
T ss_pred             HHHccHHHHHHHHHHHhcChhheeeehhhhchHHHhhhhhhcchhHH
Confidence            22211111222345677899999999999998877643 33333333

This model describes a very hydrophobic protein, predicted to span the membrane at least 8 times. The two members confirmed experimentally as glycerol-3-phosphate transporters, from E. coli and B. subtilis, share more than 50 % amino acid identity. Proteins of the hexose phosphate and phosphoglycerate transport systems are also quite similar.

>TIGR00903 2A0129 major facilitator 4 family protein

Probab=99.51  E-value=7.1e-11  Score=118.78  Aligned_cols=320  Identities=11%  Similarity=-0.034  Sum_probs=167.4

Q ss_pred             HHHHHHhhhhhcchhccCCcHHHHHHHHHHHHHHHHHHHHHHHHHhccccccccchhHHHHHHHHHHHHHHHHHhhhhhh
Q 015168            6 KLILIVGGPLVGKLMDHSPRIPAYICLNTVQAAAQLLSAAMIIHAHTVIPTSSSMLLHPWFFVLVLAGAVERLTGVALGV   85 (412)
Q Consensus         6 ~lp~ll~g~~~G~~vDr~~R~~v~~~~~~~q~~~v~~s~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~l~~~a~~~   85 (412)
                      .+.+.+..++.|.+.||++||+++..+...     .....  ........     . +.+++.=++.|..+-....+...
T Consensus        36 ~~g~~i~~~~~G~l~Dr~grr~~~~~~~~~-----~~~~~--~~~~~~~~-----~-~~l~~~R~l~G~g~~~~~~~~~~  102 (368)
T TIGR00903        36 PAAFLALTIPSGLLLDRAFKRWFLFGSLAT-----FAAAA--GRLLDPFN-----Y-EWLLACQLLAALGQPFLLNAFAP  102 (368)
T ss_pred             HHHHHHHHHHHHHHHHHccchHHHHHHHHH-----HHHHH--HHHHHhcc-----H-HHHHHHHHHHHhHhHHHHHHHHH
Confidence            456678889999999999999886544221     11110  11111010     1 22333333444444322222222


Q ss_pred             hhcccceeeecCCCchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhcChhHHHHHHHHHHHHHHHHHHHHHHHhhhccc
Q 015168           86 AVERDWAVLLAGINRPIALAKANAVLNRIDLLCEIAGASLFGILLSKYEPVTCLKFAAGLIMWSLPVMIILTWFTNKISS  165 (412)
Q Consensus        86 ai~RDwv~~l~~~~~~~~L~~~Ns~l~~id~v~~llgP~lgG~L~~~~~~~~~~~~~~~~~~~s~~~~~~~l~~~~~~~~  165 (412)
                       + .||    ++++   +..++++.......++.+++|.+++.+....|||..|.+.....++...      .....+||
T Consensus       103 -~-~~~----~~~~---~r~~a~~~~~~~~~lG~~l~~~~~~~l~~~~gWr~~f~~~~~l~~~~~~------~~~~~lp~  167 (368)
T TIGR00903       103 -A-ASQ----IREE---RRDLVISLLSFAMYLGIIFALAAGLKIYTAGGLQLLIIPIAAVAAAGII------LVLAALPA  167 (368)
T ss_pred             -H-HHH----cCHH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHccchHHHHHHHHHHHHHHHH------HHHHHcCC
Confidence             2 344    3332   7889999999999999999999999999999999988664444433321      11224454


Q ss_pred             cccccccccccccCCCCCCCCCCchhhhHHhHHHHHHhHHHHhcCCcchHHHHHHHHHHHhhhccchHHHHHHHhcCCCC
Q 015168          166 GVLDRAKCSQSCCRTSNEGPVPDADNIVDVGIEAIKLGWKEYMQQPVLPASLAYVLLCLNVVLTPGSLMTAFLTQRGLNP  245 (412)
Q Consensus       166 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~v~~~~~~~a~l~~t~v~~~~~~~~~y~~~~gls~  245 (412)
                      + + +++++          . .+      .  ++..+.|+..++||.++........+.....++.+-.+.|+++.|++.
T Consensus       168 ~-p-~~~~~----------~-~~------~--~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~wlp~~L~~~g~s~  226 (368)
T TIGR00903       168 L-P-FQAAE----------G-FG------F--KDAVKEFGALAGRKDLWIIGAILGFGVALFDNLAIWLEAALRPAGLED  226 (368)
T ss_pred             C-C-CCCCC----------C-cc------h--HHHHHHHHHHHcChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCh
Confidence            2 1 11110          0 00      0  111235788899998877443322221111233344667777788886


Q ss_pred             chhHHHhhHHHHHHHHHHHHHHHHHHHh---chhhHHHH-HHHHHHHHHHHHHHHHhcCCCcCcchHHHHHHHHHHhhhh
Q 015168          246 SIIGGFSGLCASMGVAATFLSAYLVRRL---GILKAGAA-GLIFQASLLAMAVAVYWSGSLSQQNPLLFFLCLIVLSRLG  321 (412)
Q Consensus       246 ~~~G~~~~~~avggllGt~l~~~l~~R~---g~~r~~~~-~~~~~~~~l~~~v~~~~~g~~~~~~~~~l~~~g~~~sr~G  321 (412)
                      . -|....+..+.+..|.   +++.+|.   |.++.... ...   ...+.+......+.  .....  .  .+.++.++
T Consensus       227 ~-~~~~~~l~~~~g~~g~---~~~~d~~~r~~~r~~~~~~~~~---~~a~~~~~~~~~~~--~~~~~--~--~~~l~~~~  293 (368)
T TIGR00903       227 I-AGDAVALAILAGLIGV---AVIPDRVARAGLRSIYIRAAAL---LIAAFFLALAFELN--RLALF--A--FIGIAGLL  293 (368)
T ss_pred             H-HHHHHHHHHHHHHHHH---HHhhHHhhhhhhHHHHHHHHHH---HHHHHHHHHHHccc--cHHHH--H--HHHHHHHh
Confidence            5 5666666666555554   4444443   33332221 111   11111111111211  11111  1  11111222


Q ss_pred             h-hhhhhhhhHHhhccCCcccchhHHHHHHHHHHHHHHHHHHHH-HhccCCCchhHHHHHHHHHHHHHHHH
Q 015168          322 H-MSYDIVGAQILQTGIPSSKANLIGTTEISVASLVESVMLGVA-IIANDVSHFGFLATLSLLSVVGAAWM  390 (412)
Q Consensus       322 L-w~~dl~~~~l~Q~~vp~~~~G~v~g~~~sl~~~~~ll~~~~~-~~~~~~~~f~~l~~~s~~~v~~~~~~  390 (412)
                      . +.++ ....+.+|..|++.||++.|+.++..+..+.....+. ....  +..+...+.+...+.++...
T Consensus       294 ~~~~~~-~~~~~~~~~~p~~~rgt~~G~~~~~g~~~~~~~~~~~~~~~~--~~~~~f~~~~~~~~i~~~~~  361 (368)
T TIGR00903       294 MLPAYA-IIMDWIGKFCDKELHGKAAGAIGFTSRAISVALALAAMLFIS--SAEAYFTFLAILITIAFAIA  361 (368)
T ss_pred             hhhhHH-HHHHHHHHhcchhhcCcccchhhHHHHHHHHHHHHHHHHHhc--CHHHHHHHHHHHHHHHHHHH
Confidence            1 1222 3557789999999999999999999998764444443 3332  33444444555555555544

This family of proteins are uncharacterized proteins from archaea. This family includes proteins from Archaeoglobus fulgidus and Aeropyrum pernix.

>TIGR00792 gph sugar (Glycoside-Pentoside-Hexuronide) transporter

Probab=99.50  E-value=2.8e-11  Score=123.17  Aligned_cols=309  Identities=13%  Similarity=0.100  Sum_probs=163.1

Q ss_pred             hHHHHHHhhhhhcchhccC----Cc-HHHHHHHHHHHHHHHHHHHHHHHHHhccccccccchhHHH-HHHHHHHHHHHHH
Q 015168            5 SKLILIVGGPLVGKLMDHS----PR-IPAYICLNTVQAAAQLLSAAMIIHAHTVIPTSSSMLLHPW-FFVLVLAGAVERL   78 (412)
Q Consensus         5 ~~lp~ll~g~~~G~~vDr~----~R-~~v~~~~~~~q~~~v~~s~~~~~~~~~~~~~~~~~~~~~l-~~~~~~~g~~~~l   78 (412)
                      ..+...+..|+.|.+.||.    +| |+.+..+.+.-    +++... .+ ...+. +. .....+ ++..++.+....+
T Consensus        44 ~~i~~~i~~p~~G~lsDr~~~r~Grrr~~i~~~~~~~----~i~~~~-~~-~~~~~-~~-~~~~~~~~~~~~~~~~~~~~  115 (437)
T TIGR00792        44 ARILDAITDPIMGNIVDRTRTRWGKFRPWLLIGAIPF----SIVLVL-LF-TTPDF-SA-TGKLVYAYITYILLGLFYSF  115 (437)
T ss_pred             HHHHHHhccchheEeeecCCCCCCCcchhHHHhHHHH----HHHHHH-HH-hCCCC-Cc-chHHHHHHHHHHHHHHHHHh
Confidence            4567788899999999984    44 44555553322    212221 11 11111 00 010112 2223345555555


Q ss_pred             HhhhhhhhhcccceeeecCCCchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhh-------cChhHHHHHHHHHHHHHHH
Q 015168           79 TGVALGVAVERDWAVLLAGINRPIALAKANAVLNRIDLLCEIAGASLFGILLSK-------YEPVTCLKFAAGLIMWSLP  151 (412)
Q Consensus        79 ~~~a~~~ai~RDwv~~l~~~~~~~~L~~~Ns~l~~id~v~~llgP~lgG~L~~~-------~~~~~~~~~~~~~~~~s~~  151 (412)
                      .+++...     +.+.+.++.  ++.+++++..+....++.++++.+++.+...       .+|+..+.+.+....+.. 
T Consensus       116 ~~~~~~a-----l~~~~~~~~--~~R~~~~~~~~~~~~~g~~l~~~~~~~l~~~~~~~~~~~g~~~~~~i~~~l~~~~~-  187 (437)
T TIGR00792       116 VNIPYWS-----LVPAITLDP--RERESLSTFRRFGATLGGLLVAVIVLPLVSYFGGGDDKFGWFMFALVLALIGVVSL-  187 (437)
T ss_pred             hcccHhh-----CcccccCCH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcccccHHHHHHHHHHHHHHHH-
Confidence            5544332     334465532  3688899888888888888877777777643       357766554333332222 


Q ss_pred             HHHHHHHHhhhccccccccccccccccCCCCCCCCCCchhhhHHhHHHHHHhHHHHhcCCcchHHHHHHHHHHHhhhccc
Q 015168          152 VMIILTWFTNKISSGVLDRAKCSQSCCRTSNEGPVPDADNIVDVGIEAIKLGWKEYMQQPVLPASLAYVLLCLNVVLTPG  231 (412)
Q Consensus       152 ~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~v~~~~~~~a~l~~t~v~~~~  231 (412)
                           ......++|+.    ++. +.  + +  +  + +       ....+.++..++||.++..+....++......+.
T Consensus       188 -----~~~~~~~~e~~----~~~-~~--~-~--~--~-~-------~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~  242 (437)
T TIGR00792       188 -----IICFFGTKERY----SEI-PK--N-I--E--K-K-------LSLKQIFKALFKNDQLLILCLAYLFYNLAFNIKN  242 (437)
T ss_pred             -----HHHHcCCEecC----CCC-Cc--c-c--c--c-C-------CCHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHc
Confidence                 11222333311    000 00  0 0  0  0 0       1135678888999988875544444321112222


Q ss_pred             hHHHHHHHh-cCCCCchhHHHhhHHHHHHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHHhcCCCcCcchHHH
Q 015168          232 SLMTAFLTQ-RGLNPSIIGGFSGLCASMGVAATFLSAYLVRRLGILKAGAAGLIFQASLLAMAVAVYWSGSLSQQNPLLF  310 (412)
Q Consensus       232 ~~~~~y~~~-~gls~~~~G~~~~~~avggllGt~l~~~l~~R~g~~r~~~~~~~~~~~~l~~~v~~~~~g~~~~~~~~~l  310 (412)
                      .....|.++ +| ++...+.+.....+++++++.+.+++.+|+|.+++..++..........   ....+. +  .....
T Consensus       243 ~~~~~~~~~~~~-~~~~~~~~~~~~~i~~ii~~~~~~~l~~r~g~~~~~~~~~~~~~~~~~~---~~~~~~-~--~~~~~  315 (437)
T TIGR00792       243 GVQVYYFTYVLG-DPELFSYMGSIAIVAGLIGVLLFPRLVKKFGRKILFAGGILLMVLGYLI---FFFAGS-N--LPLIL  315 (437)
T ss_pred             chhheeEeeecC-ChHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHH---HHHcch-h--HHHHH
Confidence            233444443 45 5677888888999999999999999999999988877665433222111   111111 0  11111


Q ss_pred             HHHHHHHhhhhhhhhhhhhhHHhhccCC-------cccchhHHHHHHHHHHHHHHHHHHH
Q 015168          311 FLCLIVLSRLGHMSYDIVGAQILQTGIP-------SSKANLIGTTEISVASLVESVMLGV  363 (412)
Q Consensus       311 ~~~g~~~sr~GLw~~dl~~~~l~Q~~vp-------~~~~G~v~g~~~sl~~~~~ll~~~~  363 (412)
                        ...++..+|.-........+.++.+|       ++++|+++|+.++.+.....+...+
T Consensus       316 --~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~g~~lg~~i  373 (437)
T TIGR00792       316 --VLIILAGFGQNFVTGLVWALVADTVDYGEWKTGVRAEGLVYSVRTFVRKLGQALAGFL  373 (437)
T ss_pred             --HHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhcCccchHHHHHHHHHHHHHHHHHHHHH
Confidence              11122222332233444455555544       5678999999999888754444333

GPH:cation symporters catalyze uptake of sugars in symport with a monovalent cation (H+ or Na+). Members of this family includes transporters for melibiose, lactose, raffinose, glucuronides, pentosides and isoprimeverose. Mutants of two groups of these symporters (the melibiose permeases of enteric bacteria, and the lactose permease of Streptococcus thermophilus) have been isolated in which altered cation specificity is observed or in which sugar transport is uncoupled from cation symport (i.e., uniport is catalyzed). The various members of the family can use Na+, H+ or Li, Na+ or Li+, H+ or Li+, or only H+ as the symported cation. All of these proteins possess twelve putative transmembrane a-helical spanners.

>PRK09556 uhpT sugar phosphate antiporter; Reviewed

Probab=99.50  E-value=1.8e-11  Score=126.50  Aligned_cols=331  Identities=12%  Similarity=0.027  Sum_probs=172.4

Q ss_pred             hHHHHHHhhhhhcchhccCCcHHHHHHHHHHHHHHHHHHHHHHHHHhccccccccchhHHHHHHHHHHHHHHHHHhhhhh
Q 015168            5 SKLILIVGGPLVGKLMDHSPRIPAYICLNTVQAAAQLLSAAMIIHAHTVIPTSSSMLLHPWFFVLVLAGAVERLTGVALG   84 (412)
Q Consensus         5 ~~lp~ll~g~~~G~~vDr~~R~~v~~~~~~~q~~~v~~s~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~l~~~a~~   84 (412)
                      ..+.+.+..++.|.+.||++|||++..+.+.-.+...+.    ........  +  ..+.+++.-++.|..+.....+..
T Consensus        73 ~~~~~~~~~~~~G~l~Dr~g~r~~l~~~~~~~~~~~~~~----~~~~~~~~--~--~~~~l~~~r~l~G~~~~~~~~~~~  144 (467)
T PRK09556         73 FSITYGVGKTLVGYYADGKNTKQFLPFLLILSAICMLGF----GASLGSGS--V--SLGLMIALWALSGFFQSTGGPCSY  144 (467)
T ss_pred             HHHHHHHHHhhhhhHhhccCccchHHHHHHHHHHHHHHH----HHHHhccc--c--hHHHHHHHHHHHHHHHhccchHHH
Confidence            356777889999999999999999877754332221111    11111111  1  112334444455655554443333


Q ss_pred             hhhcccceeeecCCCchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhc---ChhHHHHHHHHHHHHHHHHHHHHHHHhh
Q 015168           85 VAVERDWAVLLAGINRPIALAKANAVLNRIDLLCEIAGASLFGILLSKY---EPVTCLKFAAGLIMWSLPVMIILTWFTN  161 (412)
Q Consensus        85 ~ai~RDwv~~l~~~~~~~~L~~~Ns~l~~id~v~~llgP~lgG~L~~~~---~~~~~~~~~~~~~~~s~~~~~~~l~~~~  161 (412)
                       ++..||    ++++   +..++++.......++.+++|.+...+....   +|+..+.+.+...++   .........+
T Consensus       145 -~~i~~~----~~~~---~rg~a~gi~~~~~~lG~~l~~~i~~~~~~~~~~~~~~~~f~~~g~~~~~---~~i~~~~~~~  213 (467)
T PRK09556        145 -STITRW----TPRR---KRGRFLGFWNISHNLGGAGAGGVALWGANYFFDGHVIGMFIFPSIIALI---IGFIGLRYGS  213 (467)
T ss_pred             -HHHHHH----cCcc---ceeeeEEeeecccchhhhHHHHHHHHHHHhhccCcchhHHHHHHHHHHH---HHHHHHHhCC
Confidence             344453    5543   5778888888888888888888887776643   477665443322222   1111111112


Q ss_pred             hccccccccccccccccCC-CCCCCCCCchhhhHHhHHHHHHh-HHHHhcCCcchHHHHHH-HHHHHhhhccchHHHHHH
Q 015168          162 KISSGVLDRAKCSQSCCRT-SNEGPVPDADNIVDVGIEAIKLG-WKEYMQQPVLPASLAYV-LLCLNVVLTPGSLMTAFL  238 (412)
Q Consensus       162 ~~~~~~l~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~g-~~~~~~~~v~~~~~~~a-~l~~t~v~~~~~~~~~y~  238 (412)
                      +.||+. +..+.++...+. .++++..+.+   +...   .+- .+..++||.++...... +.+.. ..+.....+.|+
T Consensus       214 ~~p~~~-~~~~~~~~~~~~~~~~~~~~~~~---~~~~---~~~~~~~~l~~~~~~~~~~~~~~~~~~-~~~~~~~~p~yl  285 (467)
T PRK09556        214 DSPEEL-GWGKAEEIFGEPISEEDKETEST---DMTK---WQIFVEYVLKNPVIWLLCFANIFLYIV-RIGIDNWSPVYA  285 (467)
T ss_pred             CChhhc-CCCChhhcccCccchhhhccccc---cCcH---HHHHHHHHHcChHHHHHHHHHHHHHHH-HHHHHHHHHHHH
Confidence            222210 000000000000 0000000000   0001   122 23367888777644332 22322 123444577788


Q ss_pred             H-hcCCCCchhHHHhhHHHHHHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHHhcCCCcCcchHHHHHHHHHH
Q 015168          239 T-QRGLNPSIIGGFSGLCASMGVAATFLSAYLVRRLGILKAGAAGLIFQASLLAMAVAVYWSGSLSQQNPLLFFLCLIVL  317 (412)
Q Consensus       239 ~-~~gls~~~~G~~~~~~avggllGt~l~~~l~~R~g~~r~~~~~~~~~~~~l~~~v~~~~~g~~~~~~~~~l~~~g~~~  317 (412)
                      + ++|+|+.+.+.......++++.|..+.+++.+|+|.+|...............  ...............++..|...
T Consensus       286 ~~~~g~s~~~a~~~~~~~~~~~~ig~~~~G~lsDr~g~r~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~G~~~  363 (467)
T PRK09556        286 FQELGFSKEDAINTFTLFEIGALVGSLLWGWLSDLANGRRALVACIALALIIFTL--GVYQHATSEYMYLASLFALGFLV  363 (467)
T ss_pred             HHccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCchHHHHHHHHHHHHHH--HHHHhcCcHHHHHHHHHHHHHHH
Confidence            6 48999999999999999999999999999999999987765443322211111  11111110000112222222211


Q ss_pred             hhhhhhhhhhhhhHHhhccCCcccchhHHHHHHHHHHH-HHHHHHHHHHhccC
Q 015168          318 SRLGHMSYDIVGAQILQTGIPSSKANLIGTTEISVASL-VESVMLGVAIIAND  369 (412)
Q Consensus       318 sr~GLw~~dl~~~~l~Q~~vp~~~~G~v~g~~~sl~~~-~~ll~~~~~~~~~~  369 (412)
                        .|.   -........+..|++++|+++|+.++..+. .+.+...+.+...|
T Consensus       364 --~~~---~~~~~~~~~~~~p~~~~g~a~gi~~~~g~l~g~~~~~~~~G~i~~  411 (467)
T PRK09556        364 --FGP---QLLIGVAAVGFVPKKAIGVANGIKGTFAYLFGDSFAKVGLGMIAD  411 (467)
T ss_pred             --hhH---HHHHHHHHHhhcchhhHHHHHHHHHHHHHHHhHHHHhhhHHHHhc
Confidence              111   111123455888999999999999999886 44555555555545

>TIGR00896 CynX cyanate transporter

Probab=99.49  E-value=2.6e-11  Score=120.26  Aligned_cols=294  Identities=14%  Similarity=0.016  Sum_probs=160.9

Q ss_pred             hHHHHHHhhhhhcchhccCCcHHHHHHHHHHHHHHHHHHHHHHHHHhccccccccchhHHHHHHHHHHHHHHHHHhhhhh
Q 015168            5 SKLILIVGGPLVGKLMDHSPRIPAYICLNTVQAAAQLLSAAMIIHAHTVIPTSSSMLLHPWFFVLVLAGAVERLTGVALG   84 (412)
Q Consensus         5 ~~lp~ll~g~~~G~~vDr~~R~~v~~~~~~~q~~~v~~s~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~l~~~a~~   84 (412)
                      ..+...+.+++.|.+.||++|||++..+.+...+.    ..  .. ..  +  +  . +.+++..++.|...-.......
T Consensus        44 ~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~----~~--~~-~~--~--~--~-~~l~~~~~~~g~g~~~~~~~~~  109 (355)
T TIGR00896        44 PVLCFAVLAPLAPWLARRFGEERSVAAGLLLIAAG----IL--IR-SA--P--G--T-ALLFAGTALIGVGIAIINVLLP  109 (355)
T ss_pred             HHHHHHHHHHhHHHHHHHhCchHHHHHHHHHHHHH----HH--HH-Hh--c--c--H-HHHHHHHHHHHHHHHHHhccch
Confidence            35667788999999999999999988775532211    11  11 11  1  1  1 2233333334443333332222


Q ss_pred             hhhcccceeeecCCCchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhcC--hhHHHHHHHHHHHHHHHHHHHHHHHhhh
Q 015168           85 VAVERDWAVLLAGINRPIALAKANAVLNRIDLLCEIAGASLFGILLSKYE--PVTCLKFAAGLIMWSLPVMIILTWFTNK  162 (412)
Q Consensus        85 ~ai~RDwv~~l~~~~~~~~L~~~Ns~l~~id~v~~llgP~lgG~L~~~~~--~~~~~~~~~~~~~~s~~~~~~~l~~~~~  162 (412)
                       ++.+|    ..++    +..++++.......++..++|.+++.+....+  |+..+.+.....++..      ..   .
T Consensus       110 -~~~~~----~~~~----~~~~~~~~~~~~~~~g~~i~~~~~~~l~~~~~~~w~~~f~~~~~~~~~~~------~~---~  171 (355)
T TIGR00896       110 -SLIKR----DFPQ----RVGLMTGLYSMALMGGAALAAAATVPLAQHSGGHWQQALAWWALPALLAL------LA---W  171 (355)
T ss_pred             -HHHHH----hCcc----hhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHH------HH---H
Confidence             22334    3332    56788898888888899999999999987653  8877654332221111      11   1


Q ss_pred             ccccccccccccccccCCCCCCCCCCchhhhHHhHHHHHHhHHHHhcCCcchHHHHHHHHH-HHhhhccchHHHHHHHhc
Q 015168          163 ISSGVLDRAKCSQSCCRTSNEGPVPDADNIVDVGIEAIKLGWKEYMQQPVLPASLAYVLLC-LNVVLTPGSLMTAFLTQR  241 (412)
Q Consensus       163 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~v~~~~~~~a~l~-~t~v~~~~~~~~~y~~~~  241 (412)
                      +++..  ++++.  +  +    +  + .          .+.++..+|+|.++.......++ .. ........+.|.+++
T Consensus       172 ~~~~~--~~~~~--~--~----~--~-~----------~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~lp~~~~~~  227 (355)
T TIGR00896       172 IPQVR--RRVAA--N--Q----T--T-T----------RLTPVRIWRSPLAWQVTVFFGLQSGL-YYSLIGWLPAILISH  227 (355)
T ss_pred             hhhhc--cccCC--C--C----C--C-C----------CCCCchhhcCHhHHHHHHHHHHHHHH-HHHHHHHHHHHHHHc
Confidence            22210  00000  0  0    0  0 0          01233456777665533222222 11 122223456677788


Q ss_pred             CCCCchhHHHhhHHHHHHHHHHHHHHHHHHHhch-hhHHHHHHHHHHHHHHHHHHHHhcCCCcCcchHHHHHHHHHHhhh
Q 015168          242 GLNPSIIGGFSGLCASMGVAATFLSAYLVRRLGI-LKAGAAGLIFQASLLAMAVAVYWSGSLSQQNPLLFFLCLIVLSRL  320 (412)
Q Consensus       242 gls~~~~G~~~~~~avggllGt~l~~~l~~R~g~-~r~~~~~~~~~~~~l~~~v~~~~~g~~~~~~~~~l~~~g~~~sr~  320 (412)
                      |.++...|.+.+...+++++|+++.+++.+|++. ++...++......+...   ..+...  ........+.|+   ..
T Consensus       228 g~~~~~~g~~~~~~~~~~i~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~---~~~~~~--~~~~~~~~l~g~---~~  299 (355)
T TIGR00896       228 GASAATAGSLLALMQLAQAASALLIPALARRVKDQRGIVAVLAVLQLVGLCG---LLFAPM--HGLWAWALVLGL---GQ  299 (355)
T ss_pred             CCCHHHHHHHHHHHHHHHHHHHHhHHHHHhhhccchHHHHHHHHHHHHHHHH---HHHhhh--hHHHHHHHHHHH---hh
Confidence            9999999999999999999999999999999954 44545444433222211   112111  011111222222   22


Q ss_pred             hhhhhhhhhhHHhhccCCcccchhHHHHHHHHHHHHHHHHHHH
Q 015168          321 GHMSYDIVGAQILQTGIPSSKANLIGTTEISVASLVESVMLGV  363 (412)
Q Consensus       321 GLw~~dl~~~~l~Q~~vp~~~~G~v~g~~~sl~~~~~ll~~~~  363 (412)
                      |. .++.......++..+++++|+..+..+++.+....+...+
T Consensus       300 g~-~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~gp~~  341 (355)
T TIGR00896       300 GG-AFPLALTLIGLRSRQAAQAAALSAMAQSIGYLLAALGPLF  341 (355)
T ss_pred             hh-HhHHHHHHHHHhccCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            33 3455555555665567888999999888877654444433

This family of proteins is involved in active transport of cyanate. The cyanate transporter in E.Coli is used to transport cyanate into the cell so it can be metabolized into ammonia and bicarbonate. This process is used to overcome the toxicity of environmental cyanate.

>TIGR00889 2A0110 nucleoside transporter

Probab=99.47  E-value=6.9e-11  Score=120.72  Aligned_cols=157  Identities=11%  Similarity=0.081  Sum_probs=93.5

Q ss_pred             hHHHHhcCCcchHHHHHHHHHHHhhhccchHHHHHHHhcCCCC--------chhHHHhhHHHHHHHHHHHHHHHHHHHhc
Q 015168          203 GWKEYMQQPVLPASLAYVLLCLNVVLTPGSLMTAFLTQRGLNP--------SIIGGFSGLCASMGVAATFLSAYLVRRLG  274 (412)
Q Consensus       203 g~~~~~~~~v~~~~~~~a~l~~t~v~~~~~~~~~y~~~~gls~--------~~~G~~~~~~avggllGt~l~~~l~~R~g  274 (412)
                      +++..+|+|.+..-+...++..............|..+.|.++        +..|...+...++++.+.+..+++.+|+|
T Consensus       200 ~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~g~~~~~~~i~~i~~~~~~g~l~dr~g  279 (418)
T TIGR00889       200 DAFILFKNKRMAIFFFFSMLLGAPLQITNIFGNGFLHEFGRNPEFADSFVVKNASIWMSLSQFSEIFFILTIPFFLKRFG  279 (418)
T ss_pred             hHHHHhcCCCeeeHHHHHHHHHhHHHHHHHhHHHHHHHhcccccccchhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence            4566889998876444433331101111223455666666554        67799999999999999999999999999


Q ss_pred             hhhHHHHHHHHHHHHHHHHHHHHhcCCCcCcchHHHHHHHHHHhhhhhhhhhhhhhHHhhccCCcccchhHHHHHHH-HH
Q 015168          275 ILKAGAAGLIFQASLLAMAVAVYWSGSLSQQNPLLFFLCLIVLSRLGHMSYDIVGAQILQTGIPSSKANLIGTTEIS-VA  353 (412)
Q Consensus       275 ~~r~~~~~~~~~~~~l~~~v~~~~~g~~~~~~~~~l~~~g~~~sr~GLw~~dl~~~~l~Q~~vp~~~~G~v~g~~~s-l~  353 (412)
                      .++...++.....+....  .....+.   ......+....++.+++.-....+...+..+..|+++||+..|..+. .+
T Consensus       280 ~r~~l~~~~~~~~v~~~l--~~~~~~~---~~~~~~l~l~~~l~g~~~~~~~~~~~~~i~~~~p~~~~g~~~g~~~~~~~  354 (418)
T TIGR00889       280 IKKVMLLSLVAWALRFGF--FAYGDPE---YFGYALLFLSMIVYGCAFDFFNISGSVFVEKEVPVHIRASAQGLFTLMCN  354 (418)
T ss_pred             cHHHHHHHHHHHHHHHHH--HHHcCcc---hhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH
Confidence            999988776543322211  1221111   00111111122222333223456667778889999999999999974 44


Q ss_pred             HHHHHHHHHHH
Q 015168          354 SLVESVMLGVA  364 (412)
Q Consensus       354 ~~~~ll~~~~~  364 (412)
                      .....+...+.
T Consensus       355 ~lg~~iGp~l~  365 (418)
T TIGR00889       355 GFGSLLGYILS  365 (418)
T ss_pred             hhHHHHHHHHH
Confidence            44443444443

This family of proteins transports nucleosides at a high affinity. The transport mechanism is driven by proton motive force. This family includes nucleoside permease NupG and xanthosine permease from E.Coli.

>PRK03633 putative MFS family transporter protein; Provisional

Probab=99.45  E-value=2.3e-10  Score=114.90  Aligned_cols=293  Identities=13%  Similarity=0.059  Sum_probs=157.7

Q ss_pred             HHHHHHhhhhhcchhccCCcHHHHHHHHHHHHHHHHHHHHHHHHHhccccccccchhHHHHHHHHHHHHHHHHHhhhhhh
Q 015168            6 KLILIVGGPLVGKLMDHSPRIPAYICLNTVQAAAQLLSAAMIIHAHTVIPTSSSMLLHPWFFVLVLAGAVERLTGVALGV   85 (412)
Q Consensus         6 ~lp~ll~g~~~G~~vDr~~R~~v~~~~~~~q~~~v~~s~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~l~~~a~~~   85 (412)
                      .+...+..++.|.+.||++|||++..+.+.-.+.    +.  ......       ..+.+++.-++.|............
T Consensus        51 ~l~~~~~~~~~g~l~dr~g~k~~~~~~~~~~~~~----~~--~~~~~~-------~~~~l~~~~~l~G~~~~~~~~~~~~  117 (381)
T PRK03633         51 FTGNLVGTLLAGYVIKRIGFNRSYYLASLIFAAG----CA--GLGLMV-------GFWSWLAWRFVAGIGCAMIWVVVES  117 (381)
T ss_pred             HHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHH----HH--HHHHhc-------cHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            4566788999999999999999987775533221    11  111111       1123444444555544444433333


Q ss_pred             hhcccceeeecCCCchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhcChhHHHHHHHHHHHHHHHHHHHHHHHhhhccc
Q 015168           86 AVERDWAVLLAGINRPIALAKANAVLNRIDLLCEIAGASLFGILLSKYEPVTCLKFAAGLIMWSLPVMIILTWFTNKISS  165 (412)
Q Consensus        86 ai~RDwv~~l~~~~~~~~L~~~Ns~l~~id~v~~llgP~lgG~L~~~~~~~~~~~~~~~~~~~s~~~~~~~l~~~~~~~~  165 (412)
                      ++.+     ..+++   +..+..+..+....++..+||.+++.+.....+... +....   ......   .....+.++
T Consensus       118 ~~~~-----~~~~~---~~~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~~~~~-~~~~~---~~~~~~---~~~~~~~~~  182 (381)
T PRK03633        118 ALMC-----SGTSR---NRGRLLAAYMMVYYLGTVLGQLLVSKVSTELMSVLP-WVTGL---VLAAIL---PLLFTRILN  182 (381)
T ss_pred             HHHH-----hCCHH---HHHHHHHHHHHHHHHHHHHHHHHHhcccccccchHH-HHHHH---HHHHHH---HHHHhcccC
Confidence            3332     23322   567888888888888999999999998765333221 11111   111100   111112221


Q ss_pred             cccccccccccccCCCCCCCCCCchhhhHHhHHHHHHhHHHHhcCCcchHHHHHHHHH-HHhhhccchHHHHHHHhcCCC
Q 015168          166 GVLDRAKCSQSCCRTSNEGPVPDADNIVDVGIEAIKLGWKEYMQQPVLPASLAYVLLC-LNVVLTPGSLMTAFLTQRGLN  244 (412)
Q Consensus       166 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~v~~~~~~~a~l~-~t~v~~~~~~~~~y~~~~gls  244 (412)
                      +   ++++           + +.             +.++..+|+|.++..+.....+ +. .....+..+.|.+++|.+
T Consensus       183 ~---~~~~-----------~-~~-------------~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~lp~~~~~~g~s  233 (381)
T PRK03633        183 Q---QAEN-----------H-DS-------------TSIWPMLKLRQARLGVNGCIISGIV-LGSLYGLMPLYLNHQGMS  233 (381)
T ss_pred             C---CCCC-----------C-CC-------------CCHHHHHHhcchHHHHHHHHHHHHH-HHHHHHHHHHHHHHcCCC
Confidence            0   0000           0 00             0122245666666432222221 11 111223356788888999


Q ss_pred             CchhHHHhhHHHHHHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHHhcCCCcCcchHHHHHHHHHHhhhhhhh
Q 015168          245 PSIIGGFSGLCASMGVAATFLSAYLVRRLGILKAGAAGLIFQASLLAMAVAVYWSGSLSQQNPLLFFLCLIVLSRLGHMS  324 (412)
Q Consensus       245 ~~~~G~~~~~~avggllGt~l~~~l~~R~g~~r~~~~~~~~~~~~l~~~v~~~~~g~~~~~~~~~l~~~g~~~sr~GLw~  324 (412)
                      +...|.+.+...++++.|....+++.+|+|.++....+.....+....   . .. . . ......+..|..  . +. .
T Consensus       234 ~~~~g~~~~~~~~~~~~~~~~~g~l~dr~~~~~~l~~~~~~~~~~~~~---~-~~-~-~-~~~~~~~l~g~~--~-~~-~  302 (381)
T PRK03633        234 DASIGFWMALLVSAGILGQWPIGRLADRFGRLLVLRVQVFVVILGSIA---M-LS-Q-A-AMAPALFILGAA--G-FT-L  302 (381)
T ss_pred             HHHHHHHHHHHHHHHHHHHhhhHHHHHHcCcHHHHHHHHHHHHHHHHH---H-hh-h-H-HHHHHHHHHHHH--H-Hh-H
Confidence            999999999999999999999999999999988877665443322111   1 11 1 0 011111112221  1 11 2


Q ss_pred             hhhhhhHHhhccCCcccchhHHHHHHHHHHHHHHHHHHHHHhc
Q 015168          325 YDIVGAQILQTGIPSSKANLIGTTEISVASLVESVMLGVAIIA  367 (412)
Q Consensus       325 ~dl~~~~l~Q~~vp~~~~G~v~g~~~sl~~~~~ll~~~~~~~~  367 (412)
                      ++. ......+.+|+++++..++..+...+.-..+.+.+....
T Consensus       303 ~p~-~~~~~~~~~~~~~~~~~~~~~~~~~~lG~~igp~~~G~l  344 (381)
T PRK03633        303 YPV-AMAWACEKVEHHELVAMNQALLLSYTVGSLLGPSFTAML  344 (381)
T ss_pred             HHH-HHHHHHccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            444 334455677888888888887766655444444444333

>TIGR00894 2A0114euk Na(+)-dependent inorganic phosphate cotransporter

Probab=99.45  E-value=1.2e-10  Score=120.20  Aligned_cols=347  Identities=10%  Similarity=-0.106  Sum_probs=183.6

Q ss_pred             HHHHHHhhhhhcchhccCCcHHHHHHHHHHHHHHHHHHHHHHHHHhccccccccchhHHHHHHHHHHHHHHHHHhhhhhh
Q 015168            6 KLILIVGGPLVGKLMDHSPRIPAYICLNTVQAAAQLLSAAMIIHAHTVIPTSSSMLLHPWFFVLVLAGAVERLTGVALGV   85 (412)
Q Consensus         6 ~lp~ll~g~~~G~~vDr~~R~~v~~~~~~~q~~~v~~s~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~l~~~a~~~   85 (412)
                      .+.+++.+++.|.+.||++||+++..+.+.-.+.    +....+....       ..+.+++.-++.|..+.....+...
T Consensus        86 ~~~~~~~~~~~g~l~dr~g~r~~l~~~~~~~~~~----~~~~~~~~~~-------~~~~l~~~r~~~G~~~~~~~~~~~~  154 (465)
T TIGR00894        86 FYGQIIIQIPVGYLAGKYVFKWSIGIGMFLSSVI----SIVIPWAAGG-------GIALVVFCRVIQGLAQGSVSPATHK  154 (465)
T ss_pred             HHHHHHHHcchHHHHHHhCcchhhHHHHHHHHHH----HHHHHHHHHc-------CchHHHHHHHHHHHhcccchhhHHH
Confidence            4678888999999999999999988776533222    1100111111       1123444445566665544444333


Q ss_pred             hhcccceeeecCCCchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhh-cChhHHHHHHHHHHHHHHHHHHHHHHHhhhcc
Q 015168           86 AVERDWAVLLAGINRPIALAKANAVLNRIDLLCEIAGASLFGILLSK-YEPVTCLKFAAGLIMWSLPVMIILTWFTNKIS  164 (412)
Q Consensus        86 ai~RDwv~~l~~~~~~~~L~~~Ns~l~~id~v~~llgP~lgG~L~~~-~~~~~~~~~~~~~~~~s~~~~~~~l~~~~~~~  164 (412)
                           |++..++++   +..++++.......++.+++|.++|.+... .+|+..|.+.....++....    ...  ..+
T Consensus       155 -----~~~~~~~~~---~r~~~~~~~~~~~~~g~~i~~~l~~~l~~~~~gw~~~f~i~~~~~~~~~~~----~~~--~~~  220 (465)
T TIGR00894       155 -----IIVKWAPPK---ERSRLLGMSTSGFQLGTFIFLPISGWLCESWGGWPMIFYVFGIVGCAWSLL----WFV--FPA  220 (465)
T ss_pred             -----HHHhcCCHH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCeehhhhhHHHHHHHHH----HHH--Hhc
Confidence                 333456643   789999999999999999999999999987 49999887654443332211    111  112


Q ss_pred             ccccccccccccccC----CCCCCCCCCchhhhHHhHHHHHHhHHHHhcCCcchHHHHHHHHHHHhhhccchHHHHHHH-
Q 015168          165 SGVLDRAKCSQSCCR----TSNEGPVPDADNIVDVGIEAIKLGWKEYMQQPVLPASLAYVLLCLNVVLTPGSLMTAFLT-  239 (412)
Q Consensus       165 ~~~l~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~v~~~~~~~a~l~~t~v~~~~~~~~~y~~-  239 (412)
                      | .++.+++.++.++    ++.++++.+ .        +....|+..+++|.++........+......+..-++.|+. 
T Consensus       221 ~-~p~~~~~~~~~~~~~i~~~~~~~~~~-~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~l~~  290 (465)
T TIGR00894       221 D-DPSIHPCISKFEKKYINSSLQGQKGS-T--------RQSLPIKAIPKSLPVWAIWFAIFGHFWLYTILPTYLPTFISW  290 (465)
T ss_pred             C-CcccCCCCCHHHHHHHHhhcccccCC-C--------CCCCCHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            1 1111110000000    000000000 0        00124777888887776443322221101222334566776 


Q ss_pred             hcCCCCchhHHHhhHHHHHHHHHHHHHHHHHHHhchhhHHHH---HHHHHHHH-HHHHHH---HHhcCCCcCcchHHHHH
Q 015168          240 QRGLNPSIIGGFSGLCASMGVAATFLSAYLVRRLGILKAGAA---GLIFQASL-LAMAVA---VYWSGSLSQQNPLLFFL  312 (412)
Q Consensus       240 ~~gls~~~~G~~~~~~avggllGt~l~~~l~~R~g~~r~~~~---~~~~~~~~-l~~~v~---~~~~g~~~~~~~~~l~~  312 (412)
                      .+|+++...|+..++..++++.+..+.+++.+|++.++....   -.....+. ....+.   ...... +....+..+.
T Consensus       291 ~~g~s~~~~g~~~~~~~~~~~i~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~  369 (465)
T TIGR00894       291 VLRVSGKENGLLSSLPYLFAWLCSIFAGYLADFLKSSKTLSLTAARKIFNGIGGLGPGIFAYALPYLSA-AFYLTIIILT  369 (465)
T ss_pred             HhCcChHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHHHHHHHHHHHHcCC-chHHHHHHHH
Confidence            489999999999999999999999999999988765422110   00111111 111111   111111 1111111111


Q ss_pred             HHHHHhhhhhhhhhhhhhHHhhccCCcccchhHHHHHHHHHHHHHHHHHHHHHhccCC---CchhHHHHHHHHHHHHHHH
Q 015168          313 CLIVLSRLGHMSYDIVGAQILQTGIPSSKANLIGTTEISVASLVESVMLGVAIIANDV---SHFGFLATLSLLSVVGAAW  389 (412)
Q Consensus       313 ~g~~~sr~GLw~~dl~~~~l~Q~~vp~~~~G~v~g~~~sl~~~~~ll~~~~~~~~~~~---~~f~~l~~~s~~~v~~~~~  389 (412)
                      .+.  ...+.. . ......-|+.. ++.+|.++|+.+..++..+.+...++...-+.   ..|.....+..+....+..
T Consensus       370 l~~--~~~~~~-~-~~~~~~~~~~~-~~~~g~~~g~~~~~~~l~~~i~p~l~g~~~~~~~~~~~~~~f~~~~~~~~i~~i  444 (465)
T TIGR00894       370 LAN--AVSSGP-L-AGVLINSLDLA-PRFLGFIKGITGLPGFIGGLIASTLAGNILSQDSKNVWLIVFLIMAFVNILCVI  444 (465)
T ss_pred             HHH--HHhhhh-h-hhhhhchhhcC-hhHHHHHHHHHHHHHHHHHHHHHHhhheeeCCCCchHHHHHHHHHHHHHHHHHH
Confidence            111  111211 1 11222334444 45899999999999999888888777655443   3354544444444444444


Q ss_pred             HHHH
Q 015168          390 MFCH  393 (412)
Q Consensus       390 ~~~~  393 (412)
                      .+..
T Consensus       445 ~~~~  448 (465)
T TIGR00894       445 FYLI  448 (465)
T ss_pred             Heee
Confidence            4443

>PRK10406 alpha-ketoglutarate transporter; Provisional

Probab=99.44  E-value=3e-10  Score=116.21  Aligned_cols=295  Identities=12%  Similarity=0.046  Sum_probs=146.1

Q ss_pred             HHhhhhhcchhccCCcHHHHHHHHHHHHHHHHHHHHHHHHHhccccccccchhH-HHHHHHHHHHHHHHHHhhhhhhhhc
Q 015168           10 IVGGPLVGKLMDHSPRIPAYICLNTVQAAAQLLSAAMIIHAHTVIPTSSSMLLH-PWFFVLVLAGAVERLTGVALGVAVE   88 (412)
Q Consensus        10 ll~g~~~G~~vDr~~R~~v~~~~~~~q~~~v~~s~~~~~~~~~~~~~~~~~~~~-~l~~~~~~~g~~~~l~~~a~~~ai~   88 (412)
                      .+.+.+.|.+.||++|||++..+.+.-.+...++    .+..+.+...  .... .+++.=++.|..+-... ....++.
T Consensus        77 ~ig~~~~G~l~Dr~Grr~~l~~~~~~~~~~~~~~----~~~~~~~~~~--~~~~~~l~~~R~l~G~g~g~~~-~~~~~~i  149 (432)
T PRK10406         77 PIGGWLFGRIADKHGRKKSMLISVCMMCFGSLVI----ACLPGYETIG--TWAPALLLLARLFQGLSVGGEY-GTSATYM  149 (432)
T ss_pred             HHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHH----hhcCCchhHH--HHHHHHHHHHHHHHHhhhhhhH-hhHHHHH
Confidence            3777889999999999999988876543331111    1111111000  0000 12222223343322222 2222333


Q ss_pred             ccceeeecCCCchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHh--------hcChhHHHHHHHHHHHHHHHHHHHHHHHh
Q 015168           89 RDWAVLLAGINRPIALAKANAVLNRIDLLCEIAGASLFGILLS--------KYEPVTCLKFAAGLIMWSLPVMIILTWFT  160 (412)
Q Consensus        89 RDwv~~l~~~~~~~~L~~~Ns~l~~id~v~~llgP~lgG~L~~--------~~~~~~~~~~~~~~~~~s~~~~~~~l~~~  160 (412)
                      .||    ++++   +..+.++..........+++|.+++.+..        ..|||..|++.+....+.+       +..
T Consensus       150 ~e~----~p~~---~rg~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~gWr~~F~i~~~~~ll~~-------~~~  215 (432)
T PRK10406        150 SEV----AVEG---RKGFYASFQYVTLIGGQLLALLVVVVLQQTLEDAELREWGWRIPFALGAVLAVVAL-------WLR  215 (432)
T ss_pred             HHh----CCCC---cccHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHhccchHHHHHHHHHHHHHHH-------HHH
Confidence            454    3332   33445665555556667777776655542        4799998865333222211       111


Q ss_pred             hhccccccccccccccccCCCCCCCCCCchhhhHHhHHHHHHhHHHHhcCCcchHH-HHHHHH-HHHhhhccchHHHHHH
Q 015168          161 NKISSGVLDRAKCSQSCCRTSNEGPVPDADNIVDVGIEAIKLGWKEYMQQPVLPAS-LAYVLL-CLNVVLTPGSLMTAFL  238 (412)
Q Consensus       161 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~v~~~~-~~~a~l-~~t~v~~~~~~~~~y~  238 (412)
                      +++||. ++ ++++     +    . .+            ...++..+|||.+... ...... +.. ...+..-.+.|+
T Consensus       216 ~~~~e~-~~-~~~~-----~----~-~~------------~~~~~~l~~~~~~~~~~~~~~~~~~~~-~~~~~~~lp~~l  270 (432)
T PRK10406        216 RQLDET-SQ-QETR-----A----L-KE------------AGSLKGLWRNRRAFIMVLGFTAAGSLC-FYTFTTYMQKYL  270 (432)
T ss_pred             hcCCCC-ch-HHHh-----h----h-cc------------cccHHHHHhhHHHHHHHHHHHHHHHHH-HHHHHHHHHHHH
Confidence            233431 11 0000     0    0 00            1134445556544331 111111 111 111222355666


Q ss_pred             H-hcCCCCchhHHHhhHHHHHHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHHhcCCCcCcchHHHHHHHHHH
Q 015168          239 T-QRGLNPSIIGGFSGLCASMGVAATFLSAYLVRRLGILKAGAAGLIFQASLLAMAVAVYWSGSLSQQNPLLFFLCLIVL  317 (412)
Q Consensus       239 ~-~~gls~~~~G~~~~~~avggllGt~l~~~l~~R~g~~r~~~~~~~~~~~~l~~~v~~~~~g~~~~~~~~~l~~~g~~~  317 (412)
                      . ++|+++...+...+...+++..+..+.+++.+|+|++|...+....-.+...+. .........  ....+.+..+..
T Consensus       271 ~~~~g~s~~~~~~~~~i~~~~~~i~~~~~G~l~Dr~grr~~~~~~~~~~~~~~~~~-~~~~~~~~~--~~~~~~~~~~~~  347 (432)
T PRK10406        271 VNTAGMHANVASGIMTAALFVFMLIQPLIGALSDKIGRRTSMLCFGSLAALFTVPI-LSALQNVSS--PYAAFGLVMCAL  347 (432)
T ss_pred             HHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCchHHHHHHHHHHHHHHHHH-HHHHHcCCc--HHHHHHHHHHHH
Confidence            5 579999999999999888888889999999999999887665433211111111 111111101  111111111111


Q ss_pred             hhhhhhhhhhhhhHHhhccCCcccchhHHHHHHHHHHH
Q 015168          318 SRLGHMSYDIVGAQILQTGIPSSKANLIGTTEISVASL  355 (412)
Q Consensus       318 sr~GLw~~dl~~~~l~Q~~vp~~~~G~v~g~~~sl~~~  355 (412)
                      ...+.  .........+|..|++.||+..|+.+++.+.
T Consensus       348 ~~~~~--~~~~~~~~~~e~fp~~~r~t~~g~~~~~g~~  383 (432)
T PRK10406        348 LIVSF--YTSISGILKAEMFPAQVRALGVGLSYAVANA  383 (432)
T ss_pred             HHHHH--HHHHHHHHHHHHCCCCccchhhhHHHHHHHH
Confidence            11122  1123445678999999999999999988665

>PRK15075 citrate-proton symporter; Provisional

Probab=99.43  E-value=1e-10  Score=119.81  Aligned_cols=294  Identities=11%  Similarity=-0.030  Sum_probs=146.8

Q ss_pred             hhhhhcchhccCCcHHHHHHHHHHHHHHHHHHHHHHHHHhccccccccchhH--HHHHHHHHHHHHHHHHhhhhhhhhcc
Q 015168           12 GGPLVGKLMDHSPRIPAYICLNTVQAAAQLLSAAMIIHAHTVIPTSSSMLLH--PWFFVLVLAGAVERLTGVALGVAVER   89 (412)
Q Consensus        12 ~g~~~G~~vDr~~R~~v~~~~~~~q~~~v~~s~~~~~~~~~~~~~~~~~~~~--~l~~~~~~~g~~~~l~~~a~~~ai~R   89 (412)
                      .+.+.|.+.||++|||++..+.+.-...    +.  +..+...- +.-....  .+++.-++.|........+. .++..
T Consensus        72 g~~~~G~l~Dr~Grr~~l~~~~~~~~~~----~~--l~~~~~~~-~~~~~~~~~~l~~~R~l~G~~~g~~~~~~-~~~~~  143 (434)
T PRK15075         72 GAIVLGAYIDRVGRRKGLIVTLSIMASG----TL--LIAFVPGY-ATIGLAAPLLVLLGRLLQGFSAGVELGGV-SVYLA  143 (434)
T ss_pred             HHHHHHHHhhhhchHHHHHHHHHHHHHH----HH--HHHhCCcH-HHHHHHHHHHHHHHHHHhhccccccHHHH-HHHHH
Confidence            3567899999999999988876533222    21  11111110 0000000  11222223333332222222 22333


Q ss_pred             cceeeecCCCchhhhHHHHHHHHHHHHHHHHHHHHHHHHHH--------hhcChhHHHHHHHHHHHHHHHHHHHHHHHhh
Q 015168           90 DWAVLLAGINRPIALAKANAVLNRIDLLCEIAGASLFGILL--------SKYEPVTCLKFAAGLIMWSLPVMIILTWFTN  161 (412)
Q Consensus        90 Dwv~~l~~~~~~~~L~~~Ns~l~~id~v~~llgP~lgG~L~--------~~~~~~~~~~~~~~~~~~s~~~~~~~l~~~~  161 (412)
                      |    .++++   +..+.++......+++..+||.+|+.+.        ...||+..|++...    ..+..   .....
T Consensus       144 e----~~p~~---~rg~~~~~~~~~~~~g~~~g~~~g~~l~~~~~~~~~~~~gWr~~f~~~~~----~~~~~---~~~~~  209 (434)
T PRK15075        144 E----IATPG---RKGFYTSWQSASQQVAVVFAALLGYLLNQWLSPAQMAEWGWRIPFLIGCL----IVPFI---FLIRR  209 (434)
T ss_pred             h----hCCcc---cchHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHhccchHHHHHHHHH----HHHHH---HHHHH
Confidence            4    55543   6788888888888888889999888874        45789988765321    11111   11112


Q ss_pred             hccccccccccccccccCCCCCCCCCCchhhhHHhHHHHHHhHHHHhcCCc-chHHHHHHHHHHHhhhccchHHHHHHHh
Q 015168          162 KISSGVLDRAKCSQSCCRTSNEGPVPDADNIVDVGIEAIKLGWKEYMQQPV-LPASLAYVLLCLNVVLTPGSLMTAFLTQ  240 (412)
Q Consensus       162 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~v-~~~~~~~a~l~~t~v~~~~~~~~~y~~~  240 (412)
                      +.||. .+..++.          .+++ .   ++.       ++...+++. +..++.................+.|+++
T Consensus       210 ~~~e~-~~~~~~~----------~~~~-~---~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~  267 (434)
T PRK15075        210 SLEET-EEFLARK----------HRPS-M---REI-------FRSLAANWRIVLAGMLMVAMTTVSFYLITVYTPTFGKT  267 (434)
T ss_pred             hcCCC-HHHHHhh----------hccc-c---ccH-------HHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            23321 0000000          0000 0   011       122222221 1111111111100001122235667765


Q ss_pred             -cCCCCchhHHHhhHHHHHHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHHhcCCCcCcch-HHHHHHHHHHh
Q 015168          241 -RGLNPSIIGGFSGLCASMGVAATFLSAYLVRRLGILKAGAAGLIFQASLLAMAVAVYWSGSLSQQNP-LLFFLCLIVLS  318 (412)
Q Consensus       241 -~gls~~~~G~~~~~~avggllGt~l~~~l~~R~g~~r~~~~~~~~~~~~l~~~v~~~~~g~~~~~~~-~~l~~~g~~~s  318 (412)
                       +|+++.+.++.....+++++.++.+.+++.+|+|++|...++.........+ .........+.... ...+..++   
T Consensus       268 ~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~Dr~g~r~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~---  343 (434)
T PRK15075        268 VLHLSAADSLLVTLCVGVSNFIWLPIGGALSDRIGRRPVLIAFTVLAILTAYP-ALSWLVAAPSFARMLAVELWLSF---  343 (434)
T ss_pred             hcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHH-HHHHHHcCCchHHHHHHHHHHHH---
Confidence             7999999999888999999999999999999999988776554332211111 11111111110001 11111222   


Q ss_pred             hhhhhhhhhhhhHHhhccCCcccchhHHHHHHHHHHH
Q 015168          319 RLGHMSYDIVGAQILQTGIPSSKANLIGTTEISVASL  355 (412)
Q Consensus       319 r~GLw~~dl~~~~l~Q~~vp~~~~G~v~g~~~sl~~~  355 (412)
                      ..|.  +........+|..|+++||+..|..+++...
T Consensus       344 ~~g~--~~~~~~~~~~e~~p~~~rg~~~g~~~~~~~~  378 (434)
T PRK15075        344 LYGS--YNGAMVVALTEVMPAEVRTAGFSLAYSLATA  378 (434)
T ss_pred             HHHH--HHhhHHHHHHHHCCCCccchheeHHHHHHHH
Confidence            1222  3333446678999999999999987665553

>PRK03699 putative transporter; Provisional

Probab=99.41  E-value=3.1e-10  Score=114.55  Aligned_cols=226  Identities=12%  Similarity=0.007  Sum_probs=125.3

Q ss_pred             HHHHHHhhhhhcchhccCCcHHHHHHHHHHHHHHHHHHHHHHHHHhccccccccchhHHHHHHHHHHHHHHHHHhhhhhh
Q 015168            6 KLILIVGGPLVGKLMDHSPRIPAYICLNTVQAAAQLLSAAMIIHAHTVIPTSSSMLLHPWFFVLVLAGAVERLTGVALGV   85 (412)
Q Consensus         6 ~lp~ll~g~~~G~~vDr~~R~~v~~~~~~~q~~~v~~s~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~l~~~a~~~   85 (412)
                      .+...+..++.|.+.||++|||++..+.+...+.    +.  ...+...      . +.+++..++.|............
T Consensus        52 ~~~~~i~~~~~g~l~dr~g~r~~~~~~~~~~~i~----~~--l~~~~~~------~-~~~~~~~~l~G~~~g~~~~~~~~  118 (394)
T PRK03699         52 NAGILISIFLNAWLMEIIPLKRQLIFGFALMILA----VA--GLMFSHS------L-ALFSIAMFVLGVVSGITMSIGTF  118 (394)
T ss_pred             HHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHH----HH--HHHHcch------H-HHHHHHHHHHHHhhHhhccchhH
Confidence            4556777889999999999999988776544322    21  1112111      1 22333334445444333222222


Q ss_pred             hhcccceeeecCCCchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHh-hcChhHHHHHHHHHHHHHHHHHHHHHHHhhhcc
Q 015168           86 AVERDWAVLLAGINRPIALAKANAVLNRIDLLCEIAGASLFGILLS-KYEPVTCLKFAAGLIMWSLPVMIILTWFTNKIS  164 (412)
Q Consensus        86 ai~RDwv~~l~~~~~~~~L~~~Ns~l~~id~v~~llgP~lgG~L~~-~~~~~~~~~~~~~~~~~s~~~~~~~l~~~~~~~  164 (412)
                      .+. |    .++++   +..+.++........+..++|.+.+.++. ..+|+..+.+.+...++...     +....+.|
T Consensus       119 ~i~-~----~~~~~---~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~gw~~~f~~~~~~~~~~~~-----~~~~~~~p  185 (394)
T PRK03699        119 LIT-H----VYEGK---QRGSRLLFTDSFFSMAGMIFPIIAAYLLARSIEWYWVYACIGLVYVAIFI-----LTLFSEFP  185 (394)
T ss_pred             Hhh-h----hcccc---hHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccHHHHHHHHHHHHHHHHH-----HHHhcCCc
Confidence            222 2    45443   45566666666667778899999998875 57999987654443333221     11112222


Q ss_pred             ccccccccccccccCCCCCCCCCCchhhhHHhHHHHHHhHHHHhcCCcchHHHHHHHHHHHhhhccchHHHHHHH-hcCC
Q 015168          165 SGVLDRAKCSQSCCRTSNEGPVPDADNIVDVGIEAIKLGWKEYMQQPVLPASLAYVLLCLNVVLTPGSLMTAFLT-QRGL  243 (412)
Q Consensus       165 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~v~~~~~~~a~l~~t~v~~~~~~~~~y~~-~~gl  243 (412)
                      +  +  +++.  .  + +  ..++           .++.|     +|.++.......++......+....+.|++ ++|+
T Consensus       186 ~--~--~~~~--~--~-~--~~~~-----------~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~  238 (394)
T PRK03699        186 A--L--GKHA--P--K-A--DKPV-----------AKEKW-----GIGVLFLAIAALLYILAQLTFISWVPEYAQKKFGM  238 (394)
T ss_pred             c--c--cccC--c--c-c--cCcc-----------ccccC-----ChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCC
Confidence            2  1  1110  0  0 0  0000           00011     222222221112221101223344677886 4799


Q ss_pred             CCchhHHHhhHHHHHHHHHHHHHHHHHHHhchhhHHHHHHH
Q 015168          244 NPSIIGGFSGLCASMGVAATFLSAYLVRRLGILKAGAAGLI  284 (412)
Q Consensus       244 s~~~~G~~~~~~avggllGt~l~~~l~~R~g~~r~~~~~~~  284 (412)
                      |+.+.|.+.+...+++.+|.++.+++.+|++++|.......
T Consensus       239 s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~l~~~~~  279 (394)
T PRK03699        239 SLEDAGNLVSNFWMAYMVGMWIFSFIVRFFDLQRILTVLAG  279 (394)
T ss_pred             ChHHhhHHHHHHHHHHHHHHHHHHHHHHHhchhhHHHHHHH
Confidence            99999999999999999999999999999999887765443

>TIGR00882 2A0105 oligosaccharide:H+ symporter

Probab=99.41  E-value=3.5e-10  Score=114.13  Aligned_cols=319  Identities=12%  Similarity=0.028  Sum_probs=156.6

Q ss_pred             hHHHHHHhhhhhcchhccCCcHHHHHHHHHHHHHHHHHHHHHHHHHhccccccccchhHHHHHHHHHHHHHHHHHhhhhh
Q 015168            5 SKLILIVGGPLVGKLMDHSPRIPAYICLNTVQAAAQLLSAAMIIHAHTVIPTSSSMLLHPWFFVLVLAGAVERLTGVALG   84 (412)
Q Consensus         5 ~~lp~ll~g~~~G~~vDr~~R~~v~~~~~~~q~~~v~~s~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~l~~~a~~   84 (412)
                      ..+...+..++.|.+.||++|||++..+........   +........... .. ......++..+..+.......... 
T Consensus        47 ~~l~~~i~~~~~G~l~Dr~grr~~~~~~~~~~~~~~---~~~~~~~~~~~~-~~-~~~~~~~~~~~~~g~~~~~~~~~~-  120 (396)
T TIGR00882        47 ISLFSILFQPLFGLISDKLGLKKHLLWIISGLLVLF---APFFIYVFGPLL-QS-NILVGAIVGGLYLGFVFSAGAGAI-  120 (396)
T ss_pred             HHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHH---HHHHHHHhhhHH-HH-HHHHHHHHHHHHHHHHhccchhhH-
Confidence            456788899999999999999999887655432211   110111111100 00 000011111222232222222221 


Q ss_pred             hhhcccceeeecCCCchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhcChhHHHHHHHHHHHHHHHHHHHHHHHhhhcc
Q 015168           85 VAVERDWAVLLAGINRPIALAKANAVLNRIDLLCEIAGASLFGILLSKYEPVTCLKFAAGLIMWSLPVMIILTWFTNKIS  164 (412)
Q Consensus        85 ~ai~RDwv~~l~~~~~~~~L~~~Ns~l~~id~v~~llgP~lgG~L~~~~~~~~~~~~~~~~~~~s~~~~~~~l~~~~~~~  164 (412)
                          .+|.+...++    + .+..+..+....++..+||.++|.+.. .+|+..|++.+....+...    ..  ....+
T Consensus       121 ----~~~~~~~~~~----~-~~~~g~~~~~~~~g~~~g~~~~g~l~~-~~~~~~f~~~~~~~~~~~~----~~--~~~~~  184 (396)
T TIGR00882       121 ----EAYIEKVSRN----S-NFEYGKARMFGCVGWALCASIAGILFS-IDPQIVFWLGSGFALILML----LL--MFAKP  184 (396)
T ss_pred             ----HHHHHHhhhh----c-ccccchhhhhcccHHHHHHHHHhhhhc-cCchHHHHHHHHHHHHHHH----HH--HHhCC
Confidence                2332222221    1 134466777788999999999998876 5899887654433333221    11  11122


Q ss_pred             ccccccccccccccCCCCCCCCCCchhhhHHhHHHHHHhHHHHhcCCcchHHHHHHHHHHHhhhccchHHHHHHHh-c--
Q 015168          165 SGVLDRAKCSQSCCRTSNEGPVPDADNIVDVGIEAIKLGWKEYMQQPVLPASLAYVLLCLNVVLTPGSLMTAFLTQ-R--  241 (412)
Q Consensus       165 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~v~~~~~~~a~l~~t~v~~~~~~~~~y~~~-~--  241 (412)
                      | .+++++..  +.++ ++ + ++      ..    .+.++..+|||.++..+............++.....|.++ .  
T Consensus       185 ~-~~~~~~~~--~~~~-~~-~-~~------~~----~~~~~~~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~y~~~~~~~  248 (396)
T TIGR00882       185 K-APSSATVA--NALG-AN-A-SA------FS----LKLALELFRQRKFWMFVLYVVGVACVYDVFDQQFANFFTSFFAT  248 (396)
T ss_pred             C-Cchhhhhh--cccc-cc-c-CC------CC----HHHHHHHHcCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccc
Confidence            2 11111000  0000 00 0 00      00    1235667788876553322222211012233345667653 2  


Q ss_pred             -CCCCchhHHHhhHHHHHHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHHhcCCCcCcchHHHHHHHHHHhhh
Q 015168          242 -GLNPSIIGGFSGLCASMGVAATFLSAYLVRRLGILKAGAAGLIFQASLLAMAVAVYWSGSLSQQNPLLFFLCLIVLSRL  320 (412)
Q Consensus       242 -gls~~~~G~~~~~~avggllGt~l~~~l~~R~g~~r~~~~~~~~~~~~l~~~v~~~~~g~~~~~~~~~l~~~g~~~sr~  320 (412)
                       +.+...+|...+.+.+....+....+++.+|+|.++...++.....+   .........+    ...+ . ...++..+
T Consensus       249 ~~~~~~~~g~~~~~~~i~~~~~~~~~g~l~~r~g~~~~l~~~~~l~~l---~~~~~~~~~~----~~~~-~-~~~~l~g~  319 (396)
T TIGR00882       249 PQQGTRVFGYVTTMGELLNALIMFCAPLIINRIGAKNALLIAGTIMSV---RIIGSSFATT----ALEV-V-ILKMLHAF  319 (396)
T ss_pred             cccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchhHHHHHHHHHH---HHHHHHhcCC----hHHH-H-HHHHHHHH
Confidence             66777899999999999999999999999999999887766542221   1111111211    1111 1 11122222


Q ss_pred             hhhhhhhhhhHHhhccCCcccchhHHHH-HHHHHHH-HHHHHHHHHHhccCC
Q 015168          321 GHMSYDIVGAQILQTGIPSSKANLIGTT-EISVASL-VESVMLGVAIIANDV  370 (412)
Q Consensus       321 GLw~~dl~~~~l~Q~~vp~~~~G~v~g~-~~sl~~~-~~ll~~~~~~~~~~~  370 (412)
                      +.-........+.++..|++.+++..+. .++.... ..+...+.+.+....
T Consensus       320 ~~~~~~~~~~~~~~~~~~~~~~at~~~~~~~~~~~lg~~~~~~l~G~l~~~~  371 (396)
T TIGR00882       320 EVPFLLVGCFKYITSQFDVRLSATIYLIGFQFAKQLAMIFLSTLAGNMYDSI  371 (396)
T ss_pred             HHHHHHHHHHHHHHHhCCcceEEEeehHHHHHHHHHHHHHHHHhHHHHHHhc
Confidence            2211222344556776788888886665 3444444 333334444444433

>PRK10077 xylE D-xylose transporter XylE; Provisional

Probab=99.40  E-value=8.1e-10  Score=113.90  Aligned_cols=330  Identities=10%  Similarity=0.009  Sum_probs=157.7

Q ss_pred             HHHHHHhhhhhcchhccCCcHHHHHHHHHHHHHHHHHHHHHHHHHhccccccccchhHHHHHHHHHHHHHHHHHhhhhhh
Q 015168            6 KLILIVGGPLVGKLMDHSPRIPAYICLNTVQAAAQLLSAAMIIHAHTVIPTSSSMLLHPWFFVLVLAGAVERLTGVALGV   85 (412)
Q Consensus         6 ~lp~ll~g~~~G~~vDr~~R~~v~~~~~~~q~~~v~~s~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~l~~~a~~~   85 (412)
                      .+..++.+++.|.+.||++|||++..+.+.-.+...++..+........+.+. ...+.+++.=++.|........ ...
T Consensus        65 ~ig~~~~~~~~G~l~dr~Grr~~~~~~~~l~~i~~~~~~~~~~~~~~~~~~~~-~~~~~l~~~R~l~G~~~g~~~~-~~~  142 (479)
T PRK10077         65 LIGCIIGGALGGYCSNRFGRRDSLKIAAVLFFISALGSAWPEFGFTSIGPDNT-GYVPEFVIYRIIGGIGVGLASM-LSP  142 (479)
T ss_pred             HHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHhhccccccccccch-hHHHHHHHHHHHHhhhHhHHhh-HHH
Confidence            46677889999999999999999888866543321111100000001111000 0111122222333333333222 233


Q ss_pred             hhcccceeeecCCCchhhhHHHHHHHHHHHHHHHHHHHHHHHHHH--------hhcChhHHHHHHHHHHHHHHHHHHHHH
Q 015168           86 AVERDWAVLLAGINRPIALAKANAVLNRIDLLCEIAGASLFGILL--------SKYEPVTCLKFAAGLIMWSLPVMIILT  157 (412)
Q Consensus        86 ai~RDwv~~l~~~~~~~~L~~~Ns~l~~id~v~~llgP~lgG~L~--------~~~~~~~~~~~~~~~~~~s~~~~~~~l  157 (412)
                      ++..|    .++++   +..+..+..+....++.+++|.+++.+.        ...+|+..+++.....++...      
T Consensus       143 ~~i~e----~~~~~---~rg~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~gWr~~f~~~~~~~~~~~~------  209 (479)
T PRK10077        143 MYIAE----IAPAH---IRGKLVSFNQFAIIFGQLVVYFVNYFIARSGDASWLNTDGWRYMFASEAIPALLFLM------  209 (479)
T ss_pred             HHHHh----hCChh---hhhHHHHHHHHHHHHHHHHHHHHHHHHhccCcccccccCChHHHHHHHHHHHHHHHH------
Confidence            34445    45543   4666777777777888888888877664        346899887654333322221      


Q ss_pred             HHhhhccccccccc--cccccccCCC-CCCCCCCchhhhHHhHHHHHHhHHHHh-cC-CcchH---HHHHHHHH--HHhh
Q 015168          158 WFTNKISSGVLDRA--KCSQSCCRTS-NEGPVPDADNIVDVGIEAIKLGWKEYM-QQ-PVLPA---SLAYVLLC--LNVV  227 (412)
Q Consensus       158 ~~~~~~~~~~l~~~--~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~g~~~~~-~~-~v~~~---~~~~a~l~--~t~v  227 (412)
                       ....+||. ++..  +.++++.++. ++....+..   +...++..+.++.-. +. +.+.-   .+..+...  +...
T Consensus       210 -~~~~l~~s-~~~l~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  284 (479)
T PRK10077        210 -LLYFVPET-PRYLMSRGKQEQAEGILRKIMGNTLA---TQALQEIKHSLDHGRKTGGKLLMFGVGVIVIGVMLSVFQQF  284 (479)
T ss_pred             -HHHcCCCC-cHHHHHcCCHHHHHHHHHHHcCChhH---HHHHHHHHHHHHHhhhhhhhhcchhHHHHHHHHHHHHHHHH
Confidence             11234542 2110  0000000000 000000000   011111111111000 00 11110   11111111  1000


Q ss_pred             hccchH---HHHHHHhcCCCCchhHHHhhHHHHHHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHHhcCCCcC
Q 015168          228 LTPGSL---MTAFLTQRGLNPSIIGGFSGLCASMGVAATFLSAYLVRRLGILKAGAAGLIFQASLLAMAVAVYWSGSLSQ  304 (412)
Q Consensus       228 ~~~~~~---~~~y~~~~gls~~~~G~~~~~~avggllGt~l~~~l~~R~g~~r~~~~~~~~~~~~l~~~v~~~~~g~~~~  304 (412)
                      .++...   .+.+..+.|+++...++.....++..+.++.+.+++.+|+|+++...++......+............   
T Consensus       285 ~~~~~~~~~~p~i~~~~g~~~~~~~~~~~~~~~~~~i~~~~~g~l~dr~g~r~~~i~~~~~~~v~~~~l~~~~~~~~---  361 (479)
T PRK10077        285 VGINVVLYYAPEIFKTLGASTDIALLQTIIVGVINLTFTVLAIMTVDKFGRKPLQIIGALGMAIGMFSLGTAFYTQA---  361 (479)
T ss_pred             hChhHHHHHHHHHHHHcCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHhcChHHHHHhHHHHHHHHHHHHHHHhcCc---
Confidence            111111   12233567888887777777788889999999999999999988877776644333222211111111   


Q ss_pred             cchHHHHHHHHHHhhhhhh-hhhhhhhHHhhccCCcccchhHHHHHHHHHHHHHHHH
Q 015168          305 QNPLLFFLCLIVLSRLGHM-SYDIVGAQILQTGIPSSKANLIGTTEISVASLVESVM  360 (412)
Q Consensus       305 ~~~~~l~~~g~~~sr~GLw-~~dl~~~~l~Q~~vp~~~~G~v~g~~~sl~~~~~ll~  360 (412)
                      .......  +++....+.. .+......+.+|..|+++||++.|...+.++....+.
T Consensus       362 ~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~g~~~~~~~~g~~~~  416 (479)
T PRK10077        362 PGIVALL--SMLFYVAAFAMSWGPVCWVLLSEIFPNAIRGKALAIAVAAQWIANYFV  416 (479)
T ss_pred             ccHHHHH--HHHHHHHHHhccccchhHHHhHhhCChhHHHHHHHHHHHHHHHHHHHH
Confidence            1111111  1111111211 1234456778888899999999999999998866554

>TIGR00886 2A0108 nitrite extrusion protein (nitrite facilitator)

Probab=99.39  E-value=2.3e-10  Score=113.27  Aligned_cols=242  Identities=11%  Similarity=0.009  Sum_probs=132.7

Q ss_pred             hHHHHHHhhhhhcchhccCCcHHHHHHHHHHHHHHHHHHHHHHHHHhccccccccchhHHHHHHHHHHHHHHHHHhhhhh
Q 015168            5 SKLILIVGGPLVGKLMDHSPRIPAYICLNTVQAAAQLLSAAMIIHAHTVIPTSSSMLLHPWFFVLVLAGAVERLTGVALG   84 (412)
Q Consensus         5 ~~lp~ll~g~~~G~~vDr~~R~~v~~~~~~~q~~~v~~s~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~l~~~a~~   84 (412)
                      ..+...+..++.|.+.||++||+++..+.+.-.+.    ..  ...+...+     . +.+++.-++.|........+  
T Consensus        46 ~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~i~----~~--~~~~~~~~-----~-~~~~~~~~~~g~~~~~~~~~--  111 (366)
T TIGR00886        46 PVLAGAVLRIILGFLVDKFGPRYTTTLSLLLLAIP----CL--WAGLAVQS-----Y-SVLLLLRLFIGIAGGSFASC--  111 (366)
T ss_pred             HHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHH----HH--HHHHHhhh-----H-HHHHHHHHHHHHhchhhHhH--
Confidence            45677889999999999999999988876544332    11  11111101     1 12233333444433333222  


Q ss_pred             hhhcccceeeecCCCchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhh----------cChhHHHHHH-HHHHHHHHHHH
Q 015168           85 VAVERDWAVLLAGINRPIALAKANAVLNRIDLLCEIAGASLFGILLSK----------YEPVTCLKFA-AGLIMWSLPVM  153 (412)
Q Consensus        85 ~ai~RDwv~~l~~~~~~~~L~~~Ns~l~~id~v~~llgP~lgG~L~~~----------~~~~~~~~~~-~~~~~~s~~~~  153 (412)
                      .++..|    .++++   +..+.++.......++..++|.+++.+...          .+|+..+++. .....+..   
T Consensus       112 ~~~~~~----~~~~~---~r~~~~~~~~~~~~~g~~~~~~i~~~l~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~---  181 (366)
T TIGR00886       112 MPWISF----FFPKK---IQGTALGLAAGWGNMGGGVAQFVMPPIIGSLIFGAGLPAHLAWGWAFVIVPAGILLLPA---  181 (366)
T ss_pred             HHHHHH----hcCHh---hhhHHHHHHHHHhHHHHHHHHHHHHHHHHHHHhcccccccccccchhHHHHHHHHHHHH---
Confidence            223334    34443   678888888877778888888887777653          3788776332 22222111   


Q ss_pred             HHHHHHhhhccccccccccccccccCCCCCCCCCCchhhhHHhHHHHHHhHHHHhcCCcchHHHHHHHHHHHhhhccchH
Q 015168          154 IILTWFTNKISSGVLDRAKCSQSCCRTSNEGPVPDADNIVDVGIEAIKLGWKEYMQQPVLPASLAYVLLCLNVVLTPGSL  233 (412)
Q Consensus       154 ~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~v~~~~~~~a~l~~t~v~~~~~~  233 (412)
                      .+ ...  ..+| +++++++. ++.+.+++   ..      ...++..+.++..+++|.++.......++......+...
T Consensus       182 ~~-~~~--~~~~-~~~~~~~~-~~~~~~~~---~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  247 (366)
T TIGR00886       182 LL-IFF--VGAD-TPPGKPAT-GKLSFKGA---RW------SVGTGALGDQLKVFRDRHTWILALLYSVTFGSFLGVSSI  247 (366)
T ss_pred             HH-HHH--hccc-CCcccccc-hhcccccc---cc------cccchhHHHHHHHHhccchhhHHHHHHHHHHHHHHHHHH
Confidence            11 111  1122 11111110 00000000   00      000011124555677777665333222221111233444


Q ss_pred             HHHHHH-hcCCCCchhHHHhhHHHHHHHHHHHHHHHHHHHhchhhHHHHHHH
Q 015168          234 MTAFLT-QRGLNPSIIGGFSGLCASMGVAATFLSAYLVRRLGILKAGAAGLI  284 (412)
Q Consensus       234 ~~~y~~-~~gls~~~~G~~~~~~avggllGt~l~~~l~~R~g~~r~~~~~~~  284 (412)
                      .+.|++ .+|+++.+.|.+.....+.++.|..+.+++.+|+|.+|....+..
T Consensus       248 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~~r~g~~~~~~~~~~  299 (366)
T TIGR00886       248 FAMFFKDQFGLSKVTAGAYASLGGLLGSLARPLGGAISDRLGGARKLLMSFL  299 (366)
T ss_pred             HHHHHHHHcCCcHHHHHHHHHHHHHHHHHHhhccchHHHhhccchhHHHHHH
Confidence            566776 479999999999999999999999999999999999887665544

>PRK09952 shikimate transporter; Provisional

Probab=99.38  E-value=1.6e-09  Score=111.32  Aligned_cols=128  Identities=16%  Similarity=0.060  Sum_probs=74.4

Q ss_pred             HHHHHH-hcCCCCchhHHHhhHHHHHHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHHhcCCCcCcchHHHHH
Q 015168          234 MTAFLT-QRGLNPSIIGGFSGLCASMGVAATFLSAYLVRRLGILKAGAAGLIFQASLLAMAVAVYWSGSLSQQNPLLFFL  312 (412)
Q Consensus       234 ~~~y~~-~~gls~~~~G~~~~~~avggllGt~l~~~l~~R~g~~r~~~~~~~~~~~~l~~~v~~~~~g~~~~~~~~~l~~  312 (412)
                      .+.|.+ ++|+++..........++.+++++.+.+++.+|+|++|...++......+............   .....+  
T Consensus       273 ~~~y~~~~~g~s~~~~~~~~~~~g~~~~i~~~~~g~l~Dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~--  347 (438)
T PRK09952        273 ALNYSTQNLGLPRELFLNIGLLVGGLSCLTIPCFAWLADRFGRRRVYITGALIGTLSAFPFFMALEAQS---IFWIVF--  347 (438)
T ss_pred             HHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHHHHHcCC---hHHHHH--
Confidence            455765 58999886666666667778889999999999999998877665433222211111111111   011111  


Q ss_pred             HHHHHhhhhhhhhhhhhhHHhhccCCcccchhHHHHHHHHHH-HHHHHHHHHHHh
Q 015168          313 CLIVLSRLGHMSYDIVGAQILQTGIPSSKANLIGTTEISVAS-LVESVMLGVAII  366 (412)
Q Consensus       313 ~g~~~sr~GLw~~dl~~~~l~Q~~vp~~~~G~v~g~~~sl~~-~~~ll~~~~~~~  366 (412)
                      .+.....++..........+..|..|.+.|++..|....+.+ ..+.+.+.++..
T Consensus       348 ~~~~l~~~~~~~~~~~~~~~~~e~~p~~~r~tg~g~~~~~~~~lgg~~~p~i~g~  402 (438)
T PRK09952        348 FSIMLANIAHDMVVCVQQPMFTEMFGASYRYSGAGVGYQVASVVGGGFTPFIAAA  402 (438)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHCCcchhHHHHhHHHHHHHHHHHHHHHHHHHH
Confidence            111121222222233455677888899999999999777755 344445544433

>PRK10642 proline/glycine betaine transporter; Provisional

Probab=99.37  E-value=2.5e-09  Score=111.43  Aligned_cols=153  Identities=13%  Similarity=-0.002  Sum_probs=83.2

Q ss_pred             HHHHHH-hcCCCCchhHHHhhHHHHHHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHHhcCCCcCcchHHHHH
Q 015168          234 MTAFLT-QRGLNPSIIGGFSGLCASMGVAATFLSAYLVRRLGILKAGAAGLIFQASLLAMAVAVYWSGSLSQQNPLLFFL  312 (412)
Q Consensus       234 ~~~y~~-~~gls~~~~G~~~~~~avggllGt~l~~~l~~R~g~~r~~~~~~~~~~~~l~~~v~~~~~g~~~~~~~~~l~~  312 (412)
                      .+.|++ ++|+++...++......++.+.|..+.+++.+|+|+++...++.....+....+......+.    ....  .
T Consensus       273 ~p~~l~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~--~  346 (490)
T PRK10642        273 MPSYLSHNLHYSEDHGVLIIIAIMIGMLFVQPVMGLLSDRFGRRPFVILGSVALFVLAIPAFILINSNV----IGLI--F  346 (490)
T ss_pred             HHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHhCCC----HHHH--H
Confidence            556665 57999988888888888999999999999999999988776654321111111111111111    1111  1


Q ss_pred             HHHHHhhhhhhhhhhhhhHHhhccCCcccchhHHHHHHHHHHHHHHHHHH-HHHhccC-CCchhHHHHHHHHHHHHHHHH
Q 015168          313 CLIVLSRLGHMSYDIVGAQILQTGIPSSKANLIGTTEISVASLVESVMLG-VAIIAND-VSHFGFLATLSLLSVVGAAWM  390 (412)
Q Consensus       313 ~g~~~sr~GLw~~dl~~~~l~Q~~vp~~~~G~v~g~~~sl~~~~~ll~~~-~~~~~~~-~~~f~~l~~~s~~~v~~~~~~  390 (412)
                      .+.+...++.-...-.......+..|++.||+..|....+....+.+... .+.+... .+.+.......+.++.+....
T Consensus       347 ~~~~~~g~~~~~~~g~~~~~~~~~~p~~~Rg~~~g~~~~~~~~~g~~~p~i~g~l~~~~~~~~~~~~~~~~~~~i~~~~~  426 (490)
T PRK10642        347 AGLLMLAVILNCFTGVMASTLPAMFPTHIRYSALAAAFNISVLVAGLTPTLAAWLVESTQNLMMPAYYLMVVAVIGLITG  426 (490)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHCCCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchHHHHHHHHHHHHHHHHH
Confidence            12111122211122334455567789999999988766665554444333 3333322 222333333344444444444


Q ss_pred             HH
Q 015168          391 FC  392 (412)
Q Consensus       391 ~~  392 (412)
                      +.
T Consensus       427 ~~  428 (490)
T PRK10642        427 VT  428 (490)
T ss_pred             HH
Confidence            43

>TIGR00788 fbt folate/biopterin transporter

Probab=99.36  E-value=2.1e-10  Score=119.07  Aligned_cols=325  Identities=14%  Similarity=0.013  Sum_probs=175.8

Q ss_pred             hHHHHHHhhhhhcchhccCC-----cHHHHHHHHHHHHHHHHHHHHHHHHHhccccccccchhHHHHH-HHHHHHHHHHH
Q 015168            5 SKLILIVGGPLVGKLMDHSP-----RIPAYICLNTVQAAAQLLSAAMIIHAHTVIPTSSSMLLHPWFF-VLVLAGAVERL   78 (412)
Q Consensus         5 ~~lp~ll~g~~~G~~vDr~~-----R~~v~~~~~~~q~~~v~~s~~~~~~~~~~~~~~~~~~~~~l~~-~~~~~g~~~~l   78 (412)
                      ..+||.+ -++.|.++||++     ||+.+..+.+...   +  ..  .......+  + ..  .+.. ..++.+.....
T Consensus        70 ~~lpw~~-K~l~g~l~D~~~i~G~rRr~~l~~~~~l~~---~--~~--~~~l~~~~--~-~~--~~~~~~~~l~~~~~a~  136 (468)
T TIGR00788        70 SSLGWAL-KPFAGVMSDTFPLFGYTKRWYLVLSGLLGS---A--IL--YGLLPGKV--S-SA--KVAAAFIFLAALAKAL  136 (468)
T ss_pred             HHHHHHH-HHHHHHHHHhcCCCCccchHHHHHHHHHHH---H--HH--HHhccccc--c-hH--HHHHHHHHHHHHHHHH
Confidence            4678887 677999999997     7777666644321   1  11  11111111  1 11  2222 33344555555


Q ss_pred             HhhhhhhhhcccceeeecCCCchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhcChhHHHHHHHHHHHHHHHHHHHHHH
Q 015168           79 TGVALGVAVERDWAVLLAGINRPIALAKANAVLNRIDLLCEIAGASLFGILLSKYEPVTCLKFAAGLIMWSLPVMIILTW  158 (412)
Q Consensus        79 ~~~a~~~ai~RDwv~~l~~~~~~~~L~~~Ns~l~~id~v~~llgP~lgG~L~~~~~~~~~~~~~~~~~~~s~~~~~~~l~  158 (412)
                      .|++.+.-+. |    ..+ ++++....+-+..-+...++.++||.++|.+....+|+..+.+.+....+...       
T Consensus       137 ~dv~~da~~~-e----~~~-~~~~~~~~~~s~~~~~~~~G~~vg~~l~G~l~~~~~~~~~f~~~a~l~ll~~~-------  203 (468)
T TIGR00788       137 YDVLVDSLYS-E----RIR-ESPSAGPSLVSWMWGASATGGLISSLLGGPLLDKTLTRILFLITAALLLLQLF-------  203 (468)
T ss_pred             HHHhHHHHHh-h----hhh-cCCCcCCCeeeHHHHHHHHHHHHHHHHHHHHHHhcCcchHHHHHHHHHHHHHH-------
Confidence            5655544332 2    233 22212222333444555678999999999999999999987665443333321       


Q ss_pred             Hhhhcccccc-ccccccccccCCCCCCCCCCchhhhHHhHHHHHHhHHHHhcCCcchHHHHHHHH-HHHhhhccch-HHH
Q 015168          159 FTNKISSGVL-DRAKCSQSCCRTSNEGPVPDADNIVDVGIEAIKLGWKEYMQQPVLPASLAYVLL-CLNVVLTPGS-LMT  235 (412)
Q Consensus       159 ~~~~~~~~~l-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~v~~~~~~~a~l-~~t~v~~~~~-~~~  235 (412)
                      .....+|++. .+++..++++.-+.    .. ........++...+.+..+++|..+..+.+.++ |.. ..+... ...
T Consensus       204 ~~~~~~E~~~~~~~~~~~~~~~~~~----~~-~~~~~~~~~~~~~~l~~~l~~~~i~~~l~fifl~~~~-~~~~~~~~f~  277 (468)
T TIGR00788       204 VSNLSKERRAFVRPRIGTYLEMNMA----LL-TLGVLANVKVQILGLRGAIQLLEIAKPLIFIFLSYAN-LPGASGSVFC  277 (468)
T ss_pred             HHHhcccccccccccccccchhhhh----hh-hhhHHHHHHHHHHHHHHHHhcHHHHHHHHHHHHHHhh-cCCCCceeEE
Confidence            1123344210 00110000000000    00 000000112223344445788877776666666 533 122221 111


Q ss_pred             HHHHhcCCCCchhHHHhhHHHHHHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHH--HHh---cCCCcCcchHHH
Q 015168          236 AFLTQRGLNPSIIGGFSGLCASMGVAATFLSAYLVRRLGILKAGAAGLIFQASLLAMAVA--VYW---SGSLSQQNPLLF  310 (412)
Q Consensus       236 ~y~~~~gls~~~~G~~~~~~avggllGt~l~~~l~~R~g~~r~~~~~~~~~~~~l~~~v~--~~~---~g~~~~~~~~~l  310 (412)
                      .+-+.+|.+|..+|++.+.+++++++|..++.++.+|++.+++..++...+..+......  .-+   .+.+.  ..  .
T Consensus       278 ~~~~~lG~s~~~~G~~~~~~~v~~i~g~~~~~~~~~~~~~r~~l~~~~~l~~~~~~~~~~l~~~~~~~~gi~~--~~--~  353 (468)
T TIGR00788       278 ATTQCLPGGPSFSGMSKVVGNLGSLCGVGGYDRFLKTFPYRLLFGVTTLLYTLSSLFDLILVKRWNLAFGISD--EV--F  353 (468)
T ss_pred             EEcccCCCCcchhhhHHHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHhCceeeeeccccccCCCC--ee--e
Confidence            222458999999999999999999999999999999999999888776654433222110  011   11000  00  0


Q ss_pred             HHHHHHHhhhhhhhhhhhhhHHhhccCCcccchhHHHHHHHHHHHHHHHHHHHHH
Q 015168          311 FLCLIVLSRLGHMSYDIVGAQILQTGIPSSKANLIGTTEISVASLVESVMLGVAI  365 (412)
Q Consensus       311 ~~~g~~~sr~GLw~~dl~~~~l~Q~~vp~~~~G~v~g~~~sl~~~~~ll~~~~~~  365 (412)
                      .....++..++.-..-.....++++.+|++.+|+..|+..+++++...+...++.
T Consensus       354 ~~~~~~l~~~~~g~~~~~~~~~~~~~~p~~~egt~~al~~s~~~lg~~v~~~~gg  408 (468)
T TIGR00788       354 VLGDSIIAEVLAQLKFMPFLVLLARLCPSGCESSVFALLASILHLGSSVSGFLGV  408 (468)
T ss_pred             eeehhHHHHHHHHHHHccHHHHHHHhCCCCceehHHHHHHHHHHHHHHHHHHHHH
Confidence            0011111111222244667888999999999999999999999986666665443

The only functionally characterized members of the family are from protozoa and include FT1, the major folate transporter in Leishmania, and BT1, the Leishmania biopterin/folate transporter. A related protein in Trypanosoma brucei, ESAGIO, shows weak folate/biopterin transport activity.

>TIGR02332 HpaX 4-hydroxyphenylacetate permease

Probab=99.36  E-value=3.8e-10  Score=114.96  Aligned_cols=329  Identities=13%  Similarity=0.029  Sum_probs=167.6

Q ss_pred             HHHHHHhhhhhcchhccCCcHHHHHHHHHHHHHHHHHHHHHHHHHhccccccccchhHHHHHHHHHHHHHHHHHhhhhhh
Q 015168            6 KLILIVGGPLVGKLMDHSPRIPAYICLNTVQAAAQLLSAAMIIHAHTVIPTSSSMLLHPWFFVLVLAGAVERLTGVALGV   85 (412)
Q Consensus         6 ~lp~ll~g~~~G~~vDr~~R~~v~~~~~~~q~~~v~~s~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~l~~~a~~~   85 (412)
                      .+...+.+++.|.+.||++|||++..+.+.-.+.    +.  ...+...      . +.+++.-++.|..+........ 
T Consensus        53 ~~~~~~~~~~~g~l~dr~G~r~~~~~~~~~~~~~----~~--~~~~~~~------~-~~l~~~r~l~G~~~~~~~~~~~-  118 (412)
T TIGR02332        53 YAAYVICGIPSNIMLAIIGARRWIAGIMVLWGIA----ST--ATMFATG------P-ESLYLLRILVGIAEAGFLPGIL-  118 (412)
T ss_pred             HHHHHHHHhhHHHHHHHhChHHHHHHHHHHHHHH----HH--HHHHhcC------H-HHHHHHHHHHHHHHhhHHHHHH-
Confidence            3456777899999999999999987776533222    21  1112111      1 2233333445554444333322 


Q ss_pred             hhcccceeeecCCCchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHh------hcChhHHHHHHHHHHHHHHHHHHHHHHH
Q 015168           86 AVERDWAVLLAGINRPIALAKANAVLNRIDLLCEIAGASLFGILLS------KYEPVTCLKFAAGLIMWSLPVMIILTWF  159 (412)
Q Consensus        86 ai~RDwv~~l~~~~~~~~L~~~Ns~l~~id~v~~llgP~lgG~L~~------~~~~~~~~~~~~~~~~~s~~~~~~~l~~  159 (412)
                      ++..|    .++++   +..+.++.......++.+++|.++|.+..      ..||+.++.+.+...++....    .+ 
T Consensus       119 ~~~~~----~~~~~---~rg~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~gwr~~f~~~~~~~l~~~~~----~~-  186 (412)
T TIGR02332       119 LYLTF----WFPAY---FRARANALFMIAMPVTMALGLILSGYILALDGLMALKGWQWLFLLEGFPSVILGVM----TW-  186 (412)
T ss_pred             HHHHH----HcCHH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCccchhHHHHHHHHHHHHHHHH----Hh-
Confidence            23334    45543   67788999998888999999999999874      368999887644333332211    11 


Q ss_pred             hhhcccccccccc-----ccccc----cCCCCCCCCCCchhhhHHhHHHHHHhHHHHhcCCcchH-HHHHHHHHHHhhhc
Q 015168          160 TNKISSGVLDRAK-----CSQSC----CRTSNEGPVPDADNIVDVGIEAIKLGWKEYMQQPVLPA-SLAYVLLCLNVVLT  229 (412)
Q Consensus       160 ~~~~~~~~l~~~~-----~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~v~~~-~~~~a~l~~t~v~~  229 (412)
                       ..++| +++..+     +.++.    .+++.+.+.++..  ..+......+-|+..+ +|.++. .+.+.+.+.. ...
T Consensus       187 -~~~~~-~p~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~-~~~  260 (412)
T TIGR02332       187 -FWLDD-SPDKAKWLDEEDKKALKEMIDNDQLTLEQPEGA--FAHAAMPQRSMLREIF-TPAIMLYTLAYFCLTNT-LSA  260 (412)
T ss_pred             -hccCC-CcccCCCCCHHHHHHHHHHHHhccccccccccc--cccccccHHHHHHHhc-ChHHHHHHHHHHHHHHH-HHH
Confidence             12233 111000     00000    0000000000000  0000001112344444 344433 2222222211 122


Q ss_pred             cchHHHHHHHh--cCCCCchhHHHhhHHHHHHHHHHHHHHHHHHHhchhhHHH-HHHHHHHHHHHHHHHHHhcCCCcCcc
Q 015168          230 PGSLMTAFLTQ--RGLNPSIIGGFSGLCASMGVAATFLSAYLVRRLGILKAGA-AGLIFQASLLAMAVAVYWSGSLSQQN  306 (412)
Q Consensus       230 ~~~~~~~y~~~--~gls~~~~G~~~~~~avggllGt~l~~~l~~R~g~~r~~~-~~~~~~~~~l~~~v~~~~~g~~~~~~  306 (412)
                      +..-.+.|+++  .|.|+...|.+.+...++++.|.++.+++.+|+++++... .......+..  ++ ....+.    .
T Consensus       261 ~~~~~p~~l~~~~~~~s~~~~~~~~~~~~l~~~~g~l~~g~l~dr~~~r~~~~~~~~~~~~~~~--~~-~~~~~~----~  333 (412)
T TIGR02332       261 INIWTPQILQSFNQGSSNIMIGLLAAIPQFCTIFGMIWWSRHSDRLKERKHHTALPYLFAAAGW--LL-ASATDH----N  333 (412)
T ss_pred             HHHHHHHHHHhcCCCCcHHHhHHHhhHHHHHHHHHHHHHHHHhcccCccHHHHHHHHHHHHHHH--HH-HHhcCC----H
Confidence            33345567765  3788889999999999999999999999999999766432 2222221111  11 111111    1


Q ss_pred             hHHHHHHHHHHhhhhhhhhhhhhhHHhhccCCcccchhHHHHHHHHHHHHHHHHHHHHHhccC-CCchhH
Q 015168          307 PLLFFLCLIVLSRLGHMSYDIVGAQILQTGIPSSKANLIGTTEISVASLVESVMLGVAIIAND-VSHFGF  375 (412)
Q Consensus       307 ~~~l~~~g~~~sr~GLw~~dl~~~~l~Q~~vp~~~~G~v~g~~~sl~~~~~ll~~~~~~~~~~-~~~f~~  375 (412)
                      ...++  ++.+...|...--.......++..|+++||++.|+.++..+....+...+.....+ ...+..
T Consensus       334 ~~~~~--~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~a~g~~~~~~~~g~~~~p~~~g~i~~~~g~~~~  401 (412)
T TIGR02332       334 LIQLL--GIIMASMGSFSAMAIFWTTPDQSISLQARAIAIAVINATGNIGSALSPFLIGILKDATGSFNS  401 (412)
T ss_pred             HHHHH--HHHHHHHHhhhhhhHHHhhcccccchHHHHHHHHHHHHhhhhhhhhhhhhcccccccCCCCch
Confidence            11111  11111112211111122333566799999999999999999866666555444333 334443

This protein is a part of the Major Facilitator Superfamily (Pfam family pfam07690). Member of this family are found in a number of proteobacterial genomes, but only in the context of having genes for 4-hydroxyphenylacetate (4-HPA) degradation. The protein is characterized by Prieto, et al. (PubMed:9315705) as 4-hydroxyphenylacetate permease in E. coli, where 3-HPA and 3,4-dihydroxyphenylacetate are shown to competitively inhibit 4-HPA transport and therefore also interact specificially.

>TIGR00898 2A0119 cation transport protein

Probab=99.35  E-value=2.2e-09  Score=111.71  Aligned_cols=344  Identities=13%  Similarity=0.029  Sum_probs=171.8

Q ss_pred             hHHHHHHhhhhhcchhccCCcHHHHHHHHHHHHHHHHHHHHHHHHHhccccccccchhHHHHHHHHHHHHHHHHHhhhhh
Q 015168            5 SKLILIVGGPLVGKLMDHSPRIPAYICLNTVQAAAQLLSAAMIIHAHTVIPTSSSMLLHPWFFVLVLAGAVERLTGVALG   84 (412)
Q Consensus         5 ~~lp~ll~g~~~G~~vDr~~R~~v~~~~~~~q~~~v~~s~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~l~~~a~~   84 (412)
                      ..+..++.+++.|.+.||++||+++..+.+...+.    ..  ...+...      . +.+++.-++.|......... .
T Consensus       136 ~~~g~~~g~~~~g~l~Dr~Grr~~~~~~~~~~~i~----~~--~~~~~~~------~-~~~~~~r~l~G~~~~~~~~~-~  201 (505)
T TIGR00898       136 FFVGVLLGSFVFGYLSDRFGRKKVLLLSTLVTAVS----GV--LTAFSPN------Y-TVFLVFRLLVGMGIGGIWVQ-A  201 (505)
T ss_pred             HHHHHHHHHHhHHHhhhhccchHHHHHHHHHHHHH----HH--HHHHccc------H-HHHHHHHHHHHhhccchHHH-H
Confidence            34667888899999999999999988876654332    11  1111111      1 22333333444443332222 2


Q ss_pred             hhhcccceeeecCCCchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhcChhHHHHHHHHHHHHHHHHHHHHHHHhhhcc
Q 015168           85 VAVERDWAVLLAGINRPIALAKANAVLNRIDLLCEIAGASLFGILLSKYEPVTCLKFAAGLIMWSLPVMIILTWFTNKIS  164 (412)
Q Consensus        85 ~ai~RDwv~~l~~~~~~~~L~~~Ns~l~~id~v~~llgP~lgG~L~~~~~~~~~~~~~~~~~~~s~~~~~~~l~~~~~~~  164 (412)
                      .++..|    .++++   +..++++.......++.+++|.+++.+..   |+..+++.+...++...    ..   ..+|
T Consensus       202 ~~~~~e----~~~~~---~r~~~~~~~~~~~~~g~~~~~~~~~~~~~---wr~~~~~~~i~~~~~~~----~~---~~~~  264 (505)
T TIGR00898       202 VVLNTE----FLPKK---QRAIVGTLIQVFFSLGLVLLPLVAYFIPD---WRWLQLAVSLPTFLFFL----LS---WFVP  264 (505)
T ss_pred             HHHhhe----ecChh---hhHHHHHHHHHHHHHHHHHHHHHHHHhhH---HHHHHHHHHHHHHHHHH----HH---HhcC
Confidence            222334    56653   56778888888888889999999887764   88776554333222221    11   2334


Q ss_pred             cccc---ccccccc--cc---cCCCCCCCCCC-chh-hhHHhHHHH--HHhHHHHhcCCcchHHHH-HHHHHHHhhhccc
Q 015168          165 SGVL---DRAKCSQ--SC---CRTSNEGPVPD-ADN-IVDVGIEAI--KLGWKEYMQQPVLPASLA-YVLLCLNVVLTPG  231 (412)
Q Consensus       165 ~~~l---~~~~~~~--~~---~~~~~~~~~~~-~~~-~~~~~~~~~--~~g~~~~~~~~v~~~~~~-~a~l~~t~v~~~~  231 (412)
                      |...   .+.+..+  +.   ..+.++...++ ..+ ......++-  ...++..+++|.++.... ....++. ....-
T Consensus       265 esp~~l~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~-~~~~~  343 (505)
T TIGR00898       265 ESPRWLISQGRIEEALKILQRIAKINGKKLPAEVLSLSLEKDLSSSKKQYSFLDLFRTPNLRKTTLCLMMLWFT-TAFSY  343 (505)
T ss_pred             CChHHHHHCCCHHHHHHHHHHHHHHcCCCCCHHHHhhhhhhhhhhccCCCcHHHHhCChHHHHHHHHHHHHHHH-HHHHH
Confidence            4210   0000000  00   00000000000 000 000000000  136778888988877443 2333332 11000


Q ss_pred             hHHHHHHHhcCCCCchhHHHhhHHHHHHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHHhcCCCcCcchHHHH
Q 015168          232 SLMTAFLTQRGLNPSIIGGFSGLCASMGVAATFLSAYLVRRLGILKAGAAGLIFQASLLAMAVAVYWSGSLSQQNPLLFF  311 (412)
Q Consensus       232 ~~~~~y~~~~gls~~~~G~~~~~~avggllGt~l~~~l~~R~g~~r~~~~~~~~~~~~l~~~v~~~~~g~~~~~~~~~l~  311 (412)
                      .....+....+.+..   ......++..+.|.++.+++.+|+|+++...++.....++....  .+.+.. .......+.
T Consensus       344 ~~~~~~~~~~~~~~~---~~~~~~~~~~i~~~~~~~~l~dr~grr~~~~~~~~~~~~~~l~~--~~~~~~-~~~~~~~~~  417 (505)
T TIGR00898       344 YGLVLDLGNLGGNIY---LDLFISGLVELPAKLITLLLIDRLGRRYTMAASLLLAGVALLLL--LFVPVD-LYFLRTALA  417 (505)
T ss_pred             HHHhccccccCCChH---HHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHH--HHcCCC-chHHHHHHH
Confidence            011122233455433   33345567778899999999999999888776655433322211  222211 001111111


Q ss_pred             HHHHHHhhhhhhhhhhhhhHHhhccCCcccchhHHHHHHHHHHHHHHHHHHHHHhccCCCchhHHHHHHHHHHHHHHHHH
Q 015168          312 LCLIVLSRLGHMSYDIVGAQILQTGIPSSKANLIGTTEISVASLVESVMLGVAIIANDVSHFGFLATLSLLSVVGAAWMF  391 (412)
Q Consensus       312 ~~g~~~sr~GLw~~dl~~~~l~Q~~vp~~~~G~v~g~~~sl~~~~~ll~~~~~~~~~~~~~f~~l~~~s~~~v~~~~~~~  391 (412)
                          .+...+.-........+.+|..|++.||+..|+.++......++.+.+.. ..+........+.+...+.++...+
T Consensus       418 ----~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~g~~~~~~~ig~~i~p~i~~-~~~~~~~~~~~~~~~~~~~~~~~~~  492 (505)
T TIGR00898       418 ----VLGKFGITSAFQMVYLYTAELYPTVVRNLGVGVCSTMARVGSIISPFLVY-LGEKWLFLPLVLFGGLALLAGILTL  492 (505)
T ss_pred             ----HHHHHHHHHHHHHHHHHhcccccHHHHhhhHhHHHHHHHHHHHHHhHHHH-HHHHHHhhHHHHHHHHHHHHHHHHH
Confidence                11122221122344567788899999999999999999887777766655 3333333333444444444444443

>PF11700 ATG22: Vacuole effluxer Atg22 like; InterPro: IPR024671 Autophagy is a major survival mechanism in which eukaryotes recycle cellular nutrients during stress conditions

Probab=99.33  E-value=1.7e-08  Score=104.85  Aligned_cols=198  Identities=14%  Similarity=0.091  Sum_probs=117.3

Q ss_pred             HHhHHHHHHhHHHHhcCCcchHHHHHHHHHHHhhhccchHHHHHHH-hcCCCCchhHHHhhHHHHHHHHHHHHHHHHHHH
Q 015168          194 DVGIEAIKLGWKEYMQQPVLPASLAYVLLCLNVVLTPGSLMTAFLT-QRGLNPSIIGGFSGLCASMGVAATFLSAYLVRR  272 (412)
Q Consensus       194 ~~~~~~~~~g~~~~~~~~v~~~~~~~a~l~~t~v~~~~~~~~~y~~-~~gls~~~~G~~~~~~avggllGt~l~~~l~~R  272 (412)
                      ...++++.+-+|...|+|...-=+..-++|.--+.........|.+ ++|+++.++..+.-...+.++.|+++++++.+|
T Consensus       264 ~~g~~~l~~t~k~~~~~~~~~~fLia~~l~~dg~~ti~~~~~i~a~~~lg~s~~~l~~~~l~~~i~a~~Ga~~~g~l~~r  343 (477)
T PF11700_consen  264 RFGFKRLWRTFKEIRKLRQLFLFLIAYFLYSDGVNTIISFAGIYATEVLGMSTTQLIVFGLVVQIVAIIGALLFGWLQDR  343 (477)
T ss_pred             HHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            3456667777777777764443222222331101222335777887 699999999999999999999999999999999


Q ss_pred             hchh--hHHHHHHHHHHHHHHHHHHHHhcCCC--cCcchHHHHHHHHHHhhhhhhhhhhhhhHHhhccCCcccchhHHHH
Q 015168          273 LGIL--KAGAAGLIFQASLLAMAVAVYWSGSL--SQQNPLLFFLCLIVLSRLGHMSYDIVGAQILQTGIPSSKANLIGTT  348 (412)
Q Consensus       273 ~g~~--r~~~~~~~~~~~~l~~~v~~~~~g~~--~~~~~~~l~~~g~~~sr~GLw~~dl~~~~l~Q~~vp~~~~G~v~g~  348 (412)
                      +|.+  |+....+.+..++.+.....+.+...  ......+++ ..+.+.-.|-  .--...+++.+.+|+++.+...|.
T Consensus       344 ~g~k~~~~l~~~l~~~~~i~~~g~~G~~~~~~g~~~~~~f~~~-a~~~G~~~G~--~qs~sRs~~~~LiP~g~e~efFgl  420 (477)
T PF11700_consen  344 FGPKTKRTLLISLILWIIIPLYGLFGFWPSFFGLKSPWEFWVL-AVLIGLFMGG--IQSASRSLFSRLIPPGREAEFFGL  420 (477)
T ss_pred             hCCchhHHHHHHHHHHHHHHHHHHHHhhhcccCcccHHHHHHH-HHHHHHHhhh--HHHHHHHHHHHhCCCchhhHHHHH
Confidence            9998  78776665432222221111111110  101112221 1121112232  445677889999999999999999


Q ss_pred             HHHHHHHHHHHHHHHHHhccC--CCchhHHHHHHHHHHHHHHHHHHHH
Q 015168          349 EISVASLVESVMLGVAIIAND--VSHFGFLATLSLLSVVGAAWMFCHW  394 (412)
Q Consensus       349 ~~sl~~~~~ll~~~~~~~~~~--~~~f~~l~~~s~~~v~~~~~~~~~~  394 (412)
                      +.........+.+.+.....+  .+.+.-...+.+.++.....++...
T Consensus       421 y~i~gk~ss~lGPll~g~i~~~tg~~r~g~~~l~~lf~~gl~ll~~v~  468 (477)
T PF11700_consen  421 YAITGKASSWLGPLLFGLITDATGSQRYGFLFLLVLFLIGLILLFFVD  468 (477)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHhCCchhHHHHHHHHHHHHHHHHhhcc
Confidence            999999877777666444322  2233333333333344444444343

Atg22, Avt3 and Avt4 are partially redundant vacuolar effluxers, which mediate the efflux of leucine and other amino acids resulting from autophagy []. This family also includes other transporter proteins.

>PRK10429 melibiose:sodium symporter; Provisional

Probab=99.24  E-value=5.1e-09  Score=108.65  Aligned_cols=312  Identities=9%  Similarity=0.001  Sum_probs=156.2

Q ss_pred             HHHhhhhhcchhcc----CCc-HHHHHHHHHHHHHHHHHHHHHHHHHhccccccccchhHHHHHH-HHHHHHHHHHHhhh
Q 015168            9 LIVGGPLVGKLMDH----SPR-IPAYICLNTVQAAAQLLSAAMIIHAHTVIPTSSSMLLHPWFFV-LVLAGAVERLTGVA   82 (412)
Q Consensus         9 ~ll~g~~~G~~vDr----~~R-~~v~~~~~~~q~~~v~~s~~~~~~~~~~~~~~~~~~~~~l~~~-~~~~g~~~~l~~~a   82 (412)
                      -.+..|.+|.+.||    ++| |+-+..+.+..    +++.. +++  .....+. .....++.+ .++.+..-.+.++.
T Consensus        55 dai~dp~~G~lsD~t~sr~Grrrp~il~g~i~~----~i~~~-llf--~~p~~~~-~~~~~~~~~~~~l~~~~~t~~~ip  126 (473)
T PRK10429         55 DAINDPIMGWIVNNTRSRWGKFKPWILIGTLAN----SVVLF-LLF--SAHLFEG-TAQYVFVCVTYILWGMTYTIMDIP  126 (473)
T ss_pred             HHHhhchheeehhcCCCCCCCcchhHhhhhHHH----HHHHH-HHH--cCCCCCc-cHHHHHHHHHHHHHHHHHHHHcch
Confidence            34567889999995    466 55566554433    22221 122  2111011 111122222 23444555555555


Q ss_pred             hhhhhcccceeeecCCCchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCh---hHHHHHHHHHHHHHHHHHHHHHHH
Q 015168           83 LGVAVERDWAVLLAGINRPIALAKANAVLNRIDLLCEIAGASLFGILLSKYEP---VTCLKFAAGLIMWSLPVMIILTWF  159 (412)
Q Consensus        83 ~~~ai~RDwv~~l~~~~~~~~L~~~Ns~l~~id~v~~llgP~lgG~L~~~~~~---~~~~~~~~~~~~~s~~~~~~~l~~  159 (412)
                      ...     +.+++.++.  +|.+++++.-+....++.++.+.++..++...|.   +..+...+...++...+..  +..
T Consensus       127 ~~a-----l~~~lt~~~--~eR~~l~~~~~~~~~ig~~~~~~~~~~~~~~~g~~~~~~g~~~~~~i~~~~~~~~~--~~~  197 (473)
T PRK10429        127 FWS-----LVPTLTLDK--REREQLVPYPRFFASLAGFVTAGFTLPFVNYVGGGDRGFGFQMFTLVLIAFFIVST--IIT  197 (473)
T ss_pred             HHh-----hhHHhCCCH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCchhhhHHHHHHHHHHHHHHHH--HHH
Confidence            443     455577643  3788999986655666666666666655443331   1111111111111111111  122


Q ss_pred             hhhccccccccccccccccCCCCCCCCCCchhhhHHhHHHHHHhHHHHhcCCcchHHHHHHHHHHHhhhccchHHHHHHH
Q 015168          160 TNKISSGVLDRAKCSQSCCRTSNEGPVPDADNIVDVGIEAIKLGWKEYMQQPVLPASLAYVLLCLNVVLTPGSLMTAFLT  239 (412)
Q Consensus       160 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~v~~~~~~~a~l~~t~v~~~~~~~~~y~~  239 (412)
                      ....+|+. + +++.    ++    ++++        ....++.++..++||.++-.+...+++........+....|.+
T Consensus       198 ~~~~~e~~-~-~~~~----~~----~~~~--------~~~~~~~~~~~~~n~~~~~ll~~~~~~~~~~~~~~~~~~y~~~  259 (473)
T PRK10429        198 LRNVHEVY-S-SDNQ----VS----AEGS--------HLTLKDIVALIYKNDQLSCLLGMALAYNIASNIINGFAIYYFT  259 (473)
T ss_pred             HcCceecC-C-cccc----cc----cccc--------CCCHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHhhheeeEEE
Confidence            22333311 0 0000    00    0000        0124567888889998887655554442111222233333445


Q ss_pred             hcCCCCchhHHHhhHHHHHHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHHhcCCCcCcchHHHHHHHHHHhh
Q 015168          240 QRGLNPSIIGGFSGLCASMGVAATFLSAYLVRRLGILKAGAAGLIFQASLLAMAVAVYWSGSLSQQNPLLFFLCLIVLSR  319 (412)
Q Consensus       240 ~~gls~~~~G~~~~~~avggllGt~l~~~l~~R~g~~r~~~~~~~~~~~~l~~~v~~~~~g~~~~~~~~~l~~~g~~~sr  319 (412)
                      +..-++...+.+.+..+++++++..+.+++.+|+|.+++..++.....+..+........++ .  .. ..+....++..
T Consensus       260 y~~~~~~~~~~~~~~~~i~~ii~~~~~~~l~~r~gkk~~~~~~~~~~~~~~~~~~~~~~~~~-~--~~-~~~~i~~~l~g  335 (473)
T PRK10429        260 YVIGDADLFPYYLSYAGAANLVTLILFPRLVKSLSRRILWAGASIFPVLSCGVLLLMGLAAP-H--NA-LLIVIAGILLN  335 (473)
T ss_pred             EECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHHHHHhccCc-h--hH-HHHHHHHHHHH
Confidence            44446777888889888999999999999999999999887665432222211111111111 1  11 11111222233


Q ss_pred             hhhhhhhhhhhHHhhccCCc-------ccchhHHHHHHHHHHHHHHH
Q 015168          320 LGHMSYDIVGAQILQTGIPS-------SKANLIGTTEISVASLVESV  359 (412)
Q Consensus       320 ~GLw~~dl~~~~l~Q~~vp~-------~~~G~v~g~~~sl~~~~~ll  359 (412)
                      +|.-........++++.+|+       +..|...|.+...+.....+
T Consensus       336 ~~~~~~~~~~~am~ad~id~~e~~tG~R~~G~~~s~~~~~~K~~~al  382 (473)
T PRK10429        336 IGTALFWVLQVIMVADTVDYGEYKLGIRCESIAYSVQTMVVKGGSAF  382 (473)
T ss_pred             HHHHHHHHHHHHHHhhhhhhhhHhcCccchhHHHHHHHHHHHHHHHH
Confidence            34434556667778887763       34455888888887764433

>TIGR00885 fucP L-fucose:H+ symporter permease

Probab=99.21  E-value=4.1e-08  Score=100.15  Aligned_cols=234  Identities=9%  Similarity=0.023  Sum_probs=132.6

Q ss_pred             hhHHHHHHhhhhhcchhccCCcHHHHHHHHHHHHHHHHHHHHHHHHHhccccccccchhHHHHHHHHHHHHHHHHHhhhh
Q 015168            4 FSKLILIVGGPLVGKLMDHSPRIPAYICLNTVQAAAQLLSAAMIIHAHTVIPTSSSMLLHPWFFVLVLAGAVERLTGVAL   83 (412)
Q Consensus         4 ~~~lp~ll~g~~~G~~vDr~~R~~v~~~~~~~q~~~v~~s~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~l~~~a~   83 (412)
                      +..+.+++.++++|.+.||++|||++....+...+...+    ........      ..+.+++..++.|....+.+++.
T Consensus        46 ~~~~g~~i~~~~~g~l~~r~G~r~~~~~g~~l~~~g~~l----~~~~~~~~------~~~~~l~~~~l~G~g~g~~~~~~  115 (410)
T TIGR00885        46 AFYGGYFIMAIPAAIFMKKLSYKAGILLGLFLYALGAFL----FWPAAEIM------NYTLFLVGLFILTAGLGFLETAA  115 (410)
T ss_pred             HHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHH----HHHHHhhc------cHHHHHHHHHHHHhhHHHHHhhh
Confidence            456778899999999999999999988887654333111    11111111      11233444455566555555544


Q ss_pred             hhhhcccceeeecCCCchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhh--------------------------cChhH
Q 015168           84 GVAVERDWAVLLAGINRPIALAKANAVLNRIDLLCEIAGASLFGILLSK--------------------------YEPVT  137 (412)
Q Consensus        84 ~~ai~RDwv~~l~~~~~~~~L~~~Ns~l~~id~v~~llgP~lgG~L~~~--------------------------~~~~~  137 (412)
                      ...+.     .+.+++   +..+..+..+....++..+||.+++.++..                          .+|+.
T Consensus       116 ~~~~~-----~~~~~~---~~~~~~~~~~~~~~lG~~~g~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~  187 (410)
T TIGR00885       116 NPYIL-----VMGPES---TATRRLNLAQSFNPFGSIIGMVVAQQLILSNLPHQSQDVLDKLSPEELSAIKHSDLASVQT  187 (410)
T ss_pred             hHHHH-----HHCCHh---HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCccchhhhhhhcCHHHHHHHHHHHHHHHHH
Confidence            33222     244433   567778888899999999999999998743                          24777


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHhhhccccccccccccccccCCCCCCCCCCchhhhHHhHHHHHHhHHHHhcCCcchHHH
Q 015168          138 CLKFAAGLIMWSLPVMIILTWFTNKISSGVLDRAKCSQSCCRTSNEGPVPDADNIVDVGIEAIKLGWKEYMQQPVLPASL  217 (412)
Q Consensus       138 ~~~~~~~~~~~s~~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~v~~~~~  217 (412)
                      .+...+....+...     .....+.|+.    ++++  +  +    +  +          +..+.++..+|||.++...
T Consensus       188 ~fl~~a~~~~~~~~-----~~~~~~~p~~----~~~~--~--~----~--~----------~~~~~~~~~~~~~~~~~~~  238 (410)
T TIGR00885       188 PYMIIGAVVLAVAL-----LIMLTKMPAL----NHSD--A--K----Q--I----------SFSASLSRLARIRHYREGV  238 (410)
T ss_pred             HHHHHHHHHHHHHH-----HHHHhcCCCC----Cccc--c--c----c--c----------cchhhHHHHHhChhHHHHH
Confidence            77554433222211     1112233321    0000  0  0    0  0          0112445567888888766


Q ss_pred             HHHHHHHHhhhccchHHHHHHHhc--CCCCchhHHHhhHHHHHHHHHHHHHHHHHHHhchhhHHHHHHH
Q 015168          218 AYVLLCLNVVLTPGSLMTAFLTQR--GLNPSIIGGFSGLCASMGVAATFLSAYLVRRLGILKAGAAGLI  284 (412)
Q Consensus       218 ~~a~l~~t~v~~~~~~~~~y~~~~--gls~~~~G~~~~~~avggllGt~l~~~l~~R~g~~r~~~~~~~  284 (412)
                      ...++|...-....+..+.|.++.  +.++..-+...+..-.+...|-++.+++.+|++.+|...+...
T Consensus       239 l~~f~yvg~e~~~~s~l~~y~~~~~~~~~~~~a~~~~~~~~~~~~vGR~~~~~l~~r~~~~~~l~i~~~  307 (410)
T TIGR00885       239 IAQFFYVGVQIMCWTFIIQYAVRLIPGMTAGFAANYNIGAMVIFFISRFIGTWLISYLAAHKVLMAYAI  307 (410)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHH
Confidence            666666431112233455666544  3333333334444445667888888999999999888765544

This family describes the L-fucose permease in bacteria. L-fucose(6-deoxy-L-galactose) is a monosaccharide found in glycoproteins and cell wall polysaccharides. L-fucose is used in bacteria through an inducible pathway mediated by atleast four enzymes: a permease, isomerase, kinase and an aldolase which are encoded by fucP, fucI, fucK, fucA respectively. The fuc genes belong to a regulon comprising of four linked operons: fucO, fucA, fucPIK and fucR. The positive regulator is encoded by fucR, whose protein responds to fuculose-1-phosphate, which acts as an effector.

>PRK09848 glucuronide transporter; Provisional

Probab=99.21  E-value=3.7e-08  Score=101.19  Aligned_cols=153  Identities=11%  Similarity=-0.005  Sum_probs=91.2

Q ss_pred             HHhHHHHhcCCcchHHHHHHHHHHHhhhccchHHHHHHHh-cCCCCchhHHHhhHHHHHHHHHHHHHHHHHHHhchhhHH
Q 015168          201 KLGWKEYMQQPVLPASLAYVLLCLNVVLTPGSLMTAFLTQ-RGLNPSIIGGFSGLCASMGVAATFLSAYLVRRLGILKAG  279 (412)
Q Consensus       201 ~~g~~~~~~~~v~~~~~~~a~l~~t~v~~~~~~~~~y~~~-~gls~~~~G~~~~~~avggllGt~l~~~l~~R~g~~r~~  279 (412)
                      .+.++..++||.++.......++......+....+.|.++ +|.++..-++....+.++.++++.+.+++.+|+|.++..
T Consensus       218 ~~~~~~l~~n~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~~l~~r~g~~~~~  297 (448)
T PRK09848        218 KISLQTLKRNRPLFMLCIGALCVLISTFAVSASSLFYVRYVLNDTGLFTVLVLVQNLVGTVASAPLVPGMVARIGKKNTF  297 (448)
T ss_pred             HHHHHHHhCCchHHHHHHHHHHHHHHHHHHhhhheeeEeeecCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHH
Confidence            4568889999999885554444422112233334445554 787776545555555788899999999999999999988


Q ss_pred             HHHHHHHHHHHHHHHHHHhcCCCcCcchHHHHHHHHHHhhhhhhhhhhhhhHHhhccCCcc-------cchhHHHHHHHH
Q 015168          280 AAGLIFQASLLAMAVAVYWSGSLSQQNPLLFFLCLIVLSRLGHMSYDIVGAQILQTGIPSS-------KANLIGTTEISV  352 (412)
Q Consensus       280 ~~~~~~~~~~l~~~v~~~~~g~~~~~~~~~l~~~g~~~sr~GLw~~dl~~~~l~Q~~vp~~-------~~G~v~g~~~sl  352 (412)
                      .++.....+....   ..+.+..    ....+.....+..+|..........+..+.+|++       +.|..+|+++..
T Consensus       298 ~~g~~~~~i~~~~---~~~~~~~----~~~~~~~~~~l~g~G~~~~~~~~~al~~~~~~~~~~~~g~r~~G~~~~~~~~~  370 (448)
T PRK09848        298 LIGALLGTCGYLL---FFWVSVW----SLPVALVALAIASIGQGVTMTVMWALEADTVEYGEYLTGVRIEGLTYSLFSFT  370 (448)
T ss_pred             HHHHHHHHHHHHH---HHHcCch----hHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHhhCccchhHHHHHHHHH
Confidence            8776543322211   2122111    1111112233334455445555555666666544       469999999988


Q ss_pred             HHHHHHHH
Q 015168          353 ASLVESVM  360 (412)
Q Consensus       353 ~~~~~ll~  360 (412)
                      +.....+.
T Consensus       371 ~klg~aig  378 (448)
T PRK09848        371 RKCGQAIG  378 (448)
T ss_pred             HHHHHHHH
Confidence            87754443

>PLN00028 nitrate transmembrane transporter; Provisional

Probab=99.20  E-value=2.6e-08  Score=103.49  Aligned_cols=226  Identities=11%  Similarity=-0.042  Sum_probs=113.6

Q ss_pred             HHHHHhhhhhcchhccCCcHHHHHHHHHHHHHHHHHHHHHHHHHhccccccccchhHHHHHHHHHHHHHHHHHhhhhhhh
Q 015168            7 LILIVGGPLVGKLMDHSPRIPAYICLNTVQAAAQLLSAAMIIHAHTVIPTSSSMLLHPWFFVLVLAGAVERLTGVALGVA   86 (412)
Q Consensus         7 lp~ll~g~~~G~~vDr~~R~~v~~~~~~~q~~~v~~s~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~l~~~a~~~a   86 (412)
                      +...+..++.|.+.||++||+++..+.+.-.+.    .  +...+...      . +.+++.-++.|..+.... ... .
T Consensus        82 ~~~~~~~~~~G~l~dr~G~r~~~~~~~~~~~~~----~--~~~~~~~s------~-~~l~~~r~l~G~~~~~~~-~~~-~  146 (476)
T PLN00028         82 SGSIFSRLAMGPVCDLYGPRYGSAFLLMLTAPA----V--FCMSLVSS------A-TGFIAVRFFIGFSLATFV-SCQ-Y  146 (476)
T ss_pred             HHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHH----H--HHHHHhcC------H-HHHHHHHHHHHHHHHhhH-HHH-H
Confidence            344555688999999999999877664432221    1  11112211      1 123333334444332221 111 1


Q ss_pred             hcccceeeecCCCchhhhHHHHHHHHHHHHHHHHHHHHHHHHH----Hhh-----cChhHHHHHHHHHHHHHHHHHHHHH
Q 015168           87 VERDWAVLLAGINRPIALAKANAVLNRIDLLCEIAGASLFGIL----LSK-----YEPVTCLKFAAGLIMWSLPVMIILT  157 (412)
Q Consensus        87 i~RDwv~~l~~~~~~~~L~~~Ns~l~~id~v~~llgP~lgG~L----~~~-----~~~~~~~~~~~~~~~~s~~~~~~~l  157 (412)
                      ...|    .++++   +..++++.......++..++|.+.+.+    ...     .||+..+++.+...++....    .
T Consensus       147 ~i~~----~~~~~---~rg~a~g~~~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~~gWr~~f~i~g~l~l~~~l~----~  215 (476)
T PLN00028        147 WMST----MFNGK---IVGTANGIAAGWGNLGGGVTQLLMPLVFPLIKDAGAPSFTAWRIAFFVPGLLHIIMGIL----V  215 (476)
T ss_pred             HHHH----hcChh---heeHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcchhhhHHHHHHHHHHHHHHHHH----H
Confidence            2224    44443   566677766655455555554444433    322     48999887655444332211    1


Q ss_pred             HHhhhccccccccccccccccCCCCCCCCCCchhhhHHhHHHHHHhHHHHhcCCcchHH-HHHHHHHHHhhhccchHHHH
Q 015168          158 WFTNKISSGVLDRAKCSQSCCRTSNEGPVPDADNIVDVGIEAIKLGWKEYMQQPVLPAS-LAYVLLCLNVVLTPGSLMTA  236 (412)
Q Consensus       158 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~v~~~~-~~~a~l~~t~v~~~~~~~~~  236 (412)
                      ..   .+++.++. +.. +..++    .+.+ +    .   ...+.++..++++.++.. +.+...+.. ...+.+..+.
T Consensus       216 ~~---~~~~~p~~-~~~-~~~~~----~~~~-~----~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~p~  277 (476)
T PLN00028        216 LT---LGQDLPDG-NYR-ELKKS----GTMP-K----D---SFSKVLRYGVTNYRTWILALTYGYSFGV-ELTMDNIIAE  277 (476)
T ss_pred             HH---HcCcCCCC-chh-hHHhc----Cccc-c----c---cHHHHHHHHHcCchhHHHHHHHHHHHHH-HHHHHhHHHH
Confidence            11   12111110 000 00000    0000 0    0   011235556677765542 222222211 1223334556


Q ss_pred             HHH-hcCCCCchhHHHhhHHHHHHHHHHHHHHHHHHHhchh
Q 015168          237 FLT-QRGLNPSIIGGFSGLCASMGVAATFLSAYLVRRLGIL  276 (412)
Q Consensus       237 y~~-~~gls~~~~G~~~~~~avggllGt~l~~~l~~R~g~~  276 (412)
                      |+. +.|+++...+.+.+...++++.|.++.+++..|++++
T Consensus       278 ~l~~~~g~s~~~a~~~~~~~~~~~~ig~~~~G~lsDr~~~r  318 (476)
T PLN00028        278 YFYDRFGLSLETAGAIAASFGLMNLFARPAGGYLSDVAARR  318 (476)
T ss_pred             HHHHhcCCCHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHh
Confidence            765 4799999999999999999999999999999988764

>PRK09669 putative symporter YagG; Provisional

Probab=99.18  E-value=3.3e-08  Score=101.57  Aligned_cols=302  Identities=11%  Similarity=0.040  Sum_probs=148.2

Q ss_pred             HHHHHhhhhhcchhccC----Cc-HHHHHHHHHHHHHHHHHHHHHHHHHhccccccccchhHHHHH-HHHHHHHHHHHHh
Q 015168            7 LILIVGGPLVGKLMDHS----PR-IPAYICLNTVQAAAQLLSAAMIIHAHTVIPTSSSMLLHPWFF-VLVLAGAVERLTG   80 (412)
Q Consensus         7 lp~ll~g~~~G~~vDr~----~R-~~v~~~~~~~q~~~v~~s~~~~~~~~~~~~~~~~~~~~~l~~-~~~~~g~~~~l~~   80 (412)
                      +--.+..|..|.+.||.    +| |+.+....+.-    +++..+ .+.....  +. .....++. ..++.+......+
T Consensus        56 i~dai~dp~~G~lsD~~~~r~Grrrp~il~~~~~~----~i~~~l-~f~~p~~--~~-~~~~~~~~~~~~l~~~~~t~~~  127 (444)
T PRK09669         56 VLDAVTDPLMGALVDRTRTRHGQFRPYLLWFAIPF----GVVCLL-TFYTPDF--GA-TGKIIYACVTYILLSLVYTAIN  127 (444)
T ss_pred             HHHHcccceeeEeeecCCCCCCCcchhHHHHHHHH----HHHHHH-HHhCCCC--Cc-chHHHHHHHHHHHHHHHHHhhc
Confidence            34456789999999994    34 45565553322    222211 1211111  00 01112222 2234444444555


Q ss_pred             hhhhhhhcccceeeecCCCchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhcC-------hhHHHHHHHHHHHHHHHHH
Q 015168           81 VALGVAVERDWAVLLAGINRPIALAKANAVLNRIDLLCEIAGASLFGILLSKYE-------PVTCLKFAAGLIMWSLPVM  153 (412)
Q Consensus        81 ~a~~~ai~RDwv~~l~~~~~~~~L~~~Ns~l~~id~v~~llgP~lgG~L~~~~~-------~~~~~~~~~~~~~~s~~~~  153 (412)
                      +....     +.+++.++.  ++.+++++.-+....++..++|.++..+...++       |+..+.+.+....+..   
T Consensus       128 ip~~a-----l~~~~t~~~--~eR~~l~~~r~~~~~~G~~i~~~~~~pl~~~~~~~~~~~g~~~~~~i~~ii~~v~~---  197 (444)
T PRK09669        128 VPYCA-----MPGAITNDP--RERHSLQSWRFALSFIGGLIVSVIALPLVDILGKGDEQKGYFYAMMVMGLLGVVLF---  197 (444)
T ss_pred             chHHH-----hHHHhcCCH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCchhhhHHHHHHHHHHHHHHHH---
Confidence            44432     444466542  367788888887778888888877766665443       3323222111111111   


Q ss_pred             HHHHHHhhhccccccccccccccccCCCCCCCCCCchhhhHHhHHHHHHhHHHHhcCCcchHHHHHHHHHHHhhhccchH
Q 015168          154 IILTWFTNKISSGVLDRAKCSQSCCRTSNEGPVPDADNIVDVGIEAIKLGWKEYMQQPVLPASLAYVLLCLNVVLTPGSL  233 (412)
Q Consensus       154 ~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~v~~~~~~~a~l~~t~v~~~~~~  233 (412)
                         .......+|+    .++.  +  +    +  +         ....+.++..+|||.++..+...+++........+.
T Consensus       198 ---~~~~~~~~e~----~~~~--~--~----~--~---------~~~~~~~~~~~~n~~~~~l~~~~~~~~~~~~~~~~~  251 (444)
T PRK09669        198 ---FCCFFMTKER----YTPE--V--D----N--S---------SSVWKDLKLLLGNSQWRIMFIFNVVLLTAVVTRGGA  251 (444)
T ss_pred             ---HHHhCCeEEe----cCCC--C--c----C--C---------CCHHHHHHHHhCCchHHHHHHHHHHHHHHHHHHhhh
Confidence               1122222221    0010  0  0    0  0         113467888899999888655544442111112233


Q ss_pred             HHHHHHhcCCCCchhHHHhhHHHHHHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHHhcCCCcCcchHHHHHH
Q 015168          234 MTAFLTQRGLNPSIIGGFSGLCASMGVAATFLSAYLVRRLGILKAGAAGLIFQASLLAMAVAVYWSGSLSQQNPLLFFLC  313 (412)
Q Consensus       234 ~~~y~~~~gls~~~~G~~~~~~avggllGt~l~~~l~~R~g~~r~~~~~~~~~~~~l~~~v~~~~~g~~~~~~~~~l~~~  313 (412)
                      ...|.++.--++...+.+...+.+.+++++.+.+++.+|+|.++...++......+.   ...+..++ .. .  ..+..
T Consensus       252 ~~y~~~~~~~~~~~~~~~~~~~~i~~ii~~~~~~~l~~r~gk~~~~~~~~~~~~~~~---~~~~~~~~-~~-~--~~~~~  324 (444)
T PRK09669        252 TLYYVNYVLLRPDLATLFLVTGMIAGLFGALLSERLLGKFDRVRAFKWTIVAFVILS---ALIFFIPP-SN-V--WLIFA  324 (444)
T ss_pred             hheeeeeecCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHH---HHHHHhCc-ch-H--HHHHH
Confidence            333444422234455667777888999999999999999999888776654322211   11111111 11 1  11111


Q ss_pred             HHHHhhhhhhhhhhhhhHHhhccCC-------cccchhHHHHHHHHHHHHHHH
Q 015168          314 LIVLSRLGHMSYDIVGAQILQTGIP-------SSKANLIGTTEISVASLVESV  359 (412)
Q Consensus       314 g~~~sr~GLw~~dl~~~~l~Q~~vp-------~~~~G~v~g~~~sl~~~~~ll  359 (412)
                      ..++.++|..........+.-+.+|       +++.|...|.+...+.....+
T Consensus       325 ~~~i~g~~~~~~~~~~~am~ad~~d~~e~~~G~r~~g~~~s~~~~~~klg~al  377 (444)
T PRK09669        325 LNILFNFIQNLTTPLQWSMFSDVVDYEEKRSGRRLDGLVFSTNLFAIKLGLAI  377 (444)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhhhhhhhhhcCcCcchHHHHHHHHHHHHHHHH
Confidence            2223333443333334444434443       345677788887777764333

>TIGR01299 synapt_SV2 synaptic vesicle protein SV2

Probab=99.16  E-value=1e-07  Score=103.74  Aligned_cols=136  Identities=11%  Similarity=-0.048  Sum_probs=79.2

Q ss_pred             HHHhhHHHHHHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHHhcCCCcCcchHHHHHHHHHHhhhhhhhhhhh
Q 015168          249 GGFSGLCASMGVAATFLSAYLVRRLGILKAGAAGLIFQASLLAMAVAVYWSGSLSQQNPLLFFLCLIVLSRLGHMSYDIV  328 (412)
Q Consensus       249 G~~~~~~avggllGt~l~~~l~~R~g~~r~~~~~~~~~~~~l~~~v~~~~~g~~~~~~~~~l~~~g~~~sr~GLw~~dl~  328 (412)
                      .+...+++++++.|.++.+++..|+|+++++..+.....++..+.  .+.+.. . ......++.+.+.   +. .+ ..
T Consensus       598 ~~~~~l~~l~~i~G~il~g~L~Dr~GRr~~l~~~~~lsai~~ll~--~~~~s~-~-~ll~~~~l~g~~~---~~-~~-~~  668 (742)
T TIGR01299       598 YFVNFLGTLAVLPGNIVSALLMDKIGRLRMLAGSMVLSCISCFFL--SFGNSE-S-AMIALLCLFGGLS---IA-AW-NA  668 (742)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHH--HHHccH-H-HHHHHHHHHHHHH---HH-HH-HH
Confidence            445677889999999999999999999998876655433332221  222211 0 0111111112111   11 22 34


Q ss_pred             hhHHhhccCCcccchhHHHHHHHHHHHHHHHHHHHHHhccCCCchhHHHHHHHHHHHHHHHHHHH
Q 015168          329 GAQILQTGIPSSKANLIGTTEISVASLVESVMLGVAIIANDVSHFGFLATLSLLSVVGAAWMFCH  393 (412)
Q Consensus       329 ~~~l~Q~~vp~~~~G~v~g~~~sl~~~~~ll~~~~~~~~~~~~~f~~l~~~s~~~v~~~~~~~~~  393 (412)
                      ...+.-|..|.++||+..|+.+++..+..++.+.++..+-+.......++.++..+.++.+.+..
T Consensus       669 ~~a~~aEl~Pt~~Rgta~Gi~~~~~rlGaiigp~i~g~L~~~~~~~pf~i~a~~lll~~ll~~~L  733 (742)
T TIGR01299       669 LDVLTVELYPSDKRATAFGFLNALCKAAAVLGILIFGSFVGITKAAPILFASAALACGGLLALKL  733 (742)
T ss_pred             HHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHhC
Confidence            55677888999999999999999999988777776543322222222223333334444444433

This model describes a tightly conserved subfamily of the larger family of sugar (and other) transporters described by pfam model pfam00083. Members of this subfamily include closely related forms SV2A and SV2B of synaptic vesicle protein from vertebrates and a more distantly related homolog (below trusted cutoff) from Drosophila melanogaster. Members are predicted to have two sets of six transmembrane helices.

>PF13347 MFS_2: MFS/sugar transport protein

Probab=99.15  E-value=1.8e-08  Score=102.96  Aligned_cols=305  Identities=13%  Similarity=0.073  Sum_probs=165.2

Q ss_pred             HHHHhhhhhcchhc----cCCcHHH-HHHHHHHHHHHHHHHHHHHHHHhcccc-ccccchhHHH-HHHHHHHHHHHHHHh
Q 015168            8 ILIVGGPLVGKLMD----HSPRIPA-YICLNTVQAAAQLLSAAMIIHAHTVIP-TSSSMLLHPW-FFVLVLAGAVERLTG   80 (412)
Q Consensus         8 p~ll~g~~~G~~vD----r~~R~~v-~~~~~~~q~~~v~~s~~~~~~~~~~~~-~~~~~~~~~l-~~~~~~~g~~~~l~~   80 (412)
                      --.+.-|.+|.++|    |++|||- +...-+.-    +++..   ..+...| ..+......| ++..+++...-++.+
T Consensus        49 ~dai~dp~~G~~sDr~~tr~Grrrp~~l~g~i~~----~~~~~---llf~~~p~~~~~~~~~~~~~~~~~l~~~~~t~~~  121 (428)
T PF13347_consen   49 WDAITDPLIGYLSDRTRTRWGRRRPWILIGAILL----ALSFF---LLFSPPPAGLSFTAKLVWLFVFYILFDIAYTFVQ  121 (428)
T ss_pred             hhhhcCCcEEEEEeeecccccccceEeehhhHHH----HHHHH---HhhccccchhhhhhHHHHHHHHHHHHHHhhhhcc
Confidence            34566789999999    7766664 54443321    22221   1121111 1110011112 222334444444444


Q ss_pred             hhhhhhhcccceeeecCCCchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhcC-------hhHHHHHHHHHHHHHHHHH
Q 015168           81 VALGVAVERDWAVLLAGINRPIALAKANAVLNRIDLLCEIAGASLFGILLSKYE-------PVTCLKFAAGLIMWSLPVM  153 (412)
Q Consensus        81 ~a~~~ai~RDwv~~l~~~~~~~~L~~~Ns~l~~id~v~~llgP~lgG~L~~~~~-------~~~~~~~~~~~~~~s~~~~  153 (412)
                      ++..     .+.|.+++++  +|.++.++.-+....++.++...+.+.+...++       |+....+.+....+..   
T Consensus       122 i~~~-----al~~~lt~~~--~~R~~l~~~~~~~~~~g~~l~~~~~~~l~~~~g~~~~~~~~~~~~~v~~iv~~v~~---  191 (428)
T PF13347_consen  122 IPYN-----ALIPELTPDP--DERTRLSSWRMIFSMIGSLLASFLAPILVSWFGGGDTSNGYRWMALVLAIVGLVFF---  191 (428)
T ss_pred             Cchh-----hcCccccccH--hhhhhHHHHHHHHHHHHHHHHHHHhhhhhhhhccCccchHHHHHHHHHHHHHHHHh---
Confidence            4432     3666688753  378889988888888888888888888886655       3333222222222222   


Q ss_pred             HHHHHHhhhccccccccccccccccCCCCCCCCCCchhhhHHhHHHHHHhHHHHhcCCcchHHHHHHHHHHHhhhccchH
Q 015168          154 IILTWFTNKISSGVLDRAKCSQSCCRTSNEGPVPDADNIVDVGIEAIKLGWKEYMQQPVLPASLAYVLLCLNVVLTPGSL  233 (412)
Q Consensus       154 ~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~v~~~~~~~a~l~~t~v~~~~~~  233 (412)
                         ......++|+    +++.  +++               ......++.++..+|||-++..+....+.........+.
T Consensus       192 ---~i~~~~~ke~----~~~~--~~~---------------~~~~~~~~~~~~~~~nr~~~~l~~~~~~~~~~~~~~~~~  247 (428)
T PF13347_consen  192 ---LITFFFVKER----SVEV--TEQ---------------EKKISLRDSLRSLFRNRPFRILLLAFFLQWLAFALMNTF  247 (428)
T ss_pred             ---hhhhheeeec----cccc--ccc---------------ccccccccchhhhcccchHHHHHHHHHHHHhhhhhhhhH
Confidence               1222233330    0000  000               001124567888999999988666555542211223334


Q ss_pred             HHHHHHh-cCCCCchhHHHhhHHHHHHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHHhc-CCCcCcchHHHH
Q 015168          234 MTAFLTQ-RGLNPSIIGGFSGLCASMGVAATFLSAYLVRRLGILKAGAAGLIFQASLLAMAVAVYWS-GSLSQQNPLLFF  311 (412)
Q Consensus       234 ~~~y~~~-~gls~~~~G~~~~~~avggllGt~l~~~l~~R~g~~r~~~~~~~~~~~~l~~~v~~~~~-g~~~~~~~~~l~  311 (412)
                      ...|.++ .|.+ ...+.+.....++++++..+.+++.||+|.+|+...+......+.+..  .+.. ++   ....+  
T Consensus       248 ~~y~~~~vl~~~-~~~~~~~~~~~~~~~v~~~~~~~l~~r~gk~~~~~~~~~~~~~~~~~~--~~~~~~~---~~~~~--  319 (428)
T PF13347_consen  248 LPYYFTYVLGNE-GLISIFMLIFFVASIVGSPLWGRLSKRFGKKKVYIIGLLLAALGFLLL--FFLGPGS---PWLVL--  319 (428)
T ss_pred             HHHHHHHHhcCc-hhhHHHHHHHHHHHHHHHHHHHHHHHHccceeehhhhHHHHHHHHHHH--HHHHhhh---HHHHH--
Confidence            5556665 6666 678999999999999999999999999999999887776544333322  1111 12   11111  


Q ss_pred             HHHHHHhhhhhhhhhhhhhHHhhccCC-------cccchhHHHHHHHHHHHHHHHHHH
Q 015168          312 LCLIVLSRLGHMSYDIVGAQILQTGIP-------SSKANLIGTTEISVASLVESVMLG  362 (412)
Q Consensus       312 ~~g~~~sr~GLw~~dl~~~~l~Q~~vp-------~~~~G~v~g~~~sl~~~~~ll~~~  362 (412)
                       ...++.++|.-.+......+.-+.++       +++.|..+|+++..+.....+...
T Consensus       320 -i~~~l~gi~~~~~~~~~~a~~ad~id~~e~~tg~r~~g~~~s~~~~~~k~~~~la~~  376 (428)
T PF13347_consen  320 -ILFILAGIGYGAFFVIPWAMLADVIDYDEWKTGRRREGMYFSVNSFFIKIGQGLAGA  376 (428)
T ss_pred             -HHHHHhHhhhcccccccccccccchhhHHHhcCCCchHHHHHhhhhhhHHHHHHHHH
Confidence             12222233332233444444444444       456789999988888874444333

>COG2271 UhpC Sugar phosphate permease [Carbohydrate transport and metabolism]

Probab=99.11  E-value=2.4e-08  Score=99.87  Aligned_cols=344  Identities=16%  Similarity=0.153  Sum_probs=199.8

Q ss_pred             HhhhhhcchhccCCcHHHHHHHHHHHHHHHHHHHHHHHHHhccccccccchhHHHHHHHHHHHHHHHHHhhhhhhhhccc
Q 015168           11 VGGPLVGKLMDHSPRIPAYICLNTVQAAAQLLSAAMIIHAHTVIPTSSSMLLHPWFFVLVLAGAVERLTGVALGVAVERD   90 (412)
Q Consensus        11 l~g~~~G~~vDr~~R~~v~~~~~~~q~~~v~~s~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~l~~~a~~~ai~RD   90 (412)
                      +-=...|.+.||.+-|+.|-..++..++.    .+  +  ++-.+   | + +..++...+-|-.+...-.+..+.+.. 
T Consensus        79 ~sKf~~G~~sDr~npr~fm~~gLilsai~----ni--l--~Gfs~---s-~-~~~~~l~~lng~fQg~Gwpp~~~~i~~-  144 (448)
T COG2271          79 VSKFVMGVLSDRSNPRYFMAFGLILSAIV----NI--L--FGFSP---S-L-FLFAVLWVLNGWFQGMGWPPCARTITH-  144 (448)
T ss_pred             HHHHHhhhhcccCCCceeehHHHHHHHHH----HH--H--Hhhhh---H-H-HHHHHHHHHHHHHhcCCCcHHHHHHHH-
Confidence            33356899999999999888776533221    21  2  22211   0 1 122333345555555555555565554 


Q ss_pred             ceeeecCCCchhhhHHHHHHHHHHHHHHHHHHHHHH--HHHHhhcChhHHHHHHHHHHHHHHHHHHHHHHHhhhccccc-
Q 015168           91 WAVLLAGINRPIALAKANAVLNRIDLLCEIAGASLF--GILLSKYEPVTCLKFAAGLIMWSLPVMIILTWFTNKISSGV-  167 (412)
Q Consensus        91 wv~~l~~~~~~~~L~~~Ns~l~~id~v~~llgP~lg--G~L~~~~~~~~~~~~~~~~~~~s~~~~~~~l~~~~~~~~~~-  167 (412)
                      |-+.   ++|+    +.-|.=.....+.-.+.|++.  |.+....+|+.+|.+...   ++..+.++.+...+..|+.. 
T Consensus       145 Wfsr---~eRG----~~~siWn~shNiGGal~~~~~~la~~~~~~~w~~~f~~pgi---iaiival~~~~~~rd~Pqs~G  214 (448)
T COG2271         145 WFSR---KERG----TWWSIWNTSHNIGGALAPLVALLAFFAFHGGWRAAFYFPGI---IAIIVALILLFLLRDRPQSEG  214 (448)
T ss_pred             HcCc---cccC----ceEEEehhhhhcccchHHHHHHHHHHHhccchhHHHHHHHH---HHHHHHHHHHHHhCCCccccC
Confidence            4322   2222    222333334556666667777  888888899999987544   33333443444445555422 


Q ss_pred             ccc-cccc-ccccC-CCCCCCCCCchhhhHHhHHHHHHhHHHHhcCCcchH-HHHHHHHHHHhhhccchHHHHHHHh-cC
Q 015168          168 LDR-AKCS-QSCCR-TSNEGPVPDADNIVDVGIEAIKLGWKEYMQQPVLPA-SLAYVLLCLNVVLTPGSLMTAFLTQ-RG  242 (412)
Q Consensus       168 l~~-~~~~-~~~~~-~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~v~~~-~~~~a~l~~t~v~~~~~~~~~y~~~-~g  242 (412)
                      +++ ++-. ++.++ ++|++.  +       .......=++++++||..+- +++..++|+. =.+.+.=.++|++| +|
T Consensus       215 LP~ie~~~~d~~e~~~~~~~~--~-------~ls~~~i~~~YVL~Nk~iW~la~a~vfvYiv-R~gi~dW~p~YL~e~k~  284 (448)
T COG2271         215 LPPIEEYRGDPLEIYEEEKEN--E-------GLTAWQIFVKYVLKNKLIWLLALANVFVYVV-RYGINDWGPLYLSEVKG  284 (448)
T ss_pred             CCCHHHhhcCchhhhhhhccC--C-------CccHHHHHHHHHHcChHHHHHHHHHHHHHHH-HHHHhhhHHHHHHHhcC
Confidence            111 1111 11111 111000  0       01111224778899998777 7778888842 23444457889875 89


Q ss_pred             CCCchhHHHhhHHHHHHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHHhcCCCc--CcchHHHHHHHHHHhhh
Q 015168          243 LNPSIIGGFSGLCASMGVAATFLSAYLVRRLGILKAGAAGLIFQASLLAMAVAVYWSGSLS--QQNPLLFFLCLIVLSRL  320 (412)
Q Consensus       243 ls~~~~G~~~~~~avggllGt~l~~~l~~R~g~~r~~~~~~~~~~~~l~~~v~~~~~g~~~--~~~~~~l~~~g~~~sr~  320 (412)
                      +|...-+...+.-=++|+.|+++.+++..|+-..|-+..++.+ .+....++..+|..+..  .....+++..       
T Consensus       285 ~s~~~a~~a~~lfE~agl~G~Ll~GwlSDklfkgrR~p~~~i~-~~~i~~~~~~~w~~~~~~~~l~~~~l~~i-------  356 (448)
T COG2271         285 FSLVKANWAISLFEVAGLPGTLLAGWLSDKLFKGRRGPMALIF-MLLITASLVLYWLAPNGSYLLDAILLFII-------  356 (448)
T ss_pred             CCHHHHHHHHHHHHHHhhHHHHHHHHHHHHhcccccchHHHHH-HHHHHHHHHHHHcCCCccHHHHHHHHHHH-------
Confidence            9999999999999999999999999999998766555545443 23344455566654421  0111233333       


Q ss_pred             hhhhhh--hhhhHHhhccCCcccchhHHHHHHHHHHH-HHHHHHHHHHhccCC-CchhHHHHHHHHHHHHHHHHHHHHhc
Q 015168          321 GHMSYD--IVGAQILQTGIPSSKANLIGTTEISVASL-VESVMLGVAIIANDV-SHFGFLATLSLLSVVGAAWMFCHWLL  396 (412)
Q Consensus       321 GLw~~d--l~~~~l~Q~~vp~~~~G~v~g~~~sl~~~-~~ll~~~~~~~~~~~-~~f~~l~~~s~~~v~~~~~~~~~~~~  396 (412)
                      |.-+|.  .-....--|.+|.+-.|+++|..+...++ -+.+.........|. .=.+.-++++.+++++...+...|-+
T Consensus       357 Gf~IyGPqmLiGl~a~e~~pK~AaGtA~Gf~Glf~Yl~Ga~~a~~~~g~i~d~~gW~g~Fi~~~~~a~l~~lll~~~~~~  436 (448)
T COG2271         357 GFLIYGPQMLIGLAAAEFVPKKAAGTATGFVGLFAYLIGAALAGLPLGYIADTWGWDGGFIVLSIAALLAILLLLPVWNA  436 (448)
T ss_pred             HHHHhhHHHHHHHHHhccccHhhccchhchhhhHHHHhhHHhcCCcceeeEecCCCcchHHHHHHHHHHHHHHHHHHHhh
Confidence            322332  23334445778999999999999999998 444444444455454 33445566677778888888888843

>TIGR00887 2A0109 phosphate:H+ symporter

Probab=99.10  E-value=2.5e-07  Score=96.61  Aligned_cols=335  Identities=13%  Similarity=0.073  Sum_probs=160.4

Q ss_pred             hHHHHHHhhhhhcchhccCCcHHHHHHHHHHHHHHHHHHHHHHHHHhccccccccchhHHHHHHHHHHHHHHHHHhhhhh
Q 015168            5 SKLILIVGGPLVGKLMDHSPRIPAYICLNTVQAAAQLLSAAMIIHAHTVIPTSSSMLLHPWFFVLVLAGAVERLTGVALG   84 (412)
Q Consensus         5 ~~lp~ll~g~~~G~~vDr~~R~~v~~~~~~~q~~~v~~s~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~l~~~a~~   84 (412)
                      ..+..++..++.|.+.||++||+++..+.+.-.+...++    .......+ .  ...+.+++.-++.|...........
T Consensus        65 ~~ig~~ig~~~~g~l~d~~Grr~~~~~~~~~~~v~~~~~----~~~~~~~~-~--~~~~~~~~~r~l~G~~~g~~~~~~~  137 (502)
T TIGR00887        65 ASIGTLAGQLFFGWLADKLGRKRVYGMELIIMIIATVAS----GLSPGSSP-K--SVMATLCFWRFWLGVGIGGDYPLSA  137 (502)
T ss_pred             HHHHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHH----HHccCccc-c--hHHHHHHHHHHHHHHHHhhhhHHHH
Confidence            345567788899999999999999877755443321111    11111110 0  0011233333344444433333222


Q ss_pred             hhhcccceeeecCCCchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhh-----------------------cChhHHHHH
Q 015168           85 VAVERDWAVLLAGINRPIALAKANAVLNRIDLLCEIAGASLFGILLSK-----------------------YEPVTCLKF  141 (412)
Q Consensus        85 ~ai~RDwv~~l~~~~~~~~L~~~Ns~l~~id~v~~llgP~lgG~L~~~-----------------------~~~~~~~~~  141 (412)
                       ++..+    .++.+   +..++.+.......++.++||.+++.+...                       .+||..+.+
T Consensus       138 -~~~~e----~~p~~---~Rg~~~~~~~~~~~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~WR~~~~~  209 (502)
T TIGR00887       138 -IITSE----FATKK---WRGAMMAAVFAMQGFGILAGAIVALIVLAGFKHSLEAAADEASCTGSCVPAVDYMWRILIGF  209 (502)
T ss_pred             -HHHHH----hcChh---hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccccccccccccccchhcccHHHHHHH
Confidence             22223    56653   677888888888899999999998876531                       268877643


Q ss_pred             HHHHHHHHHHHHHHHHHHhhhcccccc---cccccccc---------ccCCCCCCCCCCchhhhHHhHHHHHHhHHHHhc
Q 015168          142 AAGLIMWSLPVMIILTWFTNKISSGVL---DRAKCSQS---------CCRTSNEGPVPDADNIVDVGIEAIKLGWKEYMQ  209 (412)
Q Consensus       142 ~~~~~~~s~~~~~~~l~~~~~~~~~~l---~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~  209 (412)
                      .+.-.++    .+  . ....+||.+.   .+++++++         ..+..++  ..+.++ .++..++-...|+.+++
T Consensus       210 ~~ip~~i----~~--~-~~~~lpESpr~l~~~~~~~~~a~~~~~~~~~~~~~~~--~~~~~~-~~~~~~~~~~~~~~l~~  279 (502)
T TIGR00887       210 GAVPALL----AL--Y-FRLTIPETPRYTADVAKDVEQAASDMSAVLQVKIEAE--PDEVEK-ASTAVEVPKASWSDFFT  279 (502)
T ss_pred             HHHHHHH----HH--H-HHHhCCCCHHHHHHhCcchHHHHHHHHHHhccccccC--cccccc-hhccccchhhhHHHHHH
Confidence            2211111    11  1 1235566321   11111000         0000000  000000 00000001123555544


Q ss_pred             C----CcchHHHHHHHHHHHh-hh--ccchHHHHHHHhcCCCCchhH-----------H-HhhHHHHHHHHHHHHHHHHH
Q 015168          210 Q----PVLPASLAYVLLCLNV-VL--TPGSLMTAFLTQRGLNPSIIG-----------G-FSGLCASMGVAATFLSAYLV  270 (412)
Q Consensus       210 ~----~v~~~~~~~a~l~~t~-v~--~~~~~~~~y~~~~gls~~~~G-----------~-~~~~~avggllGt~l~~~l~  270 (412)
                      +    +..+..+.....++.. ..  +.....+.++++.|+++..-+           . ......++.+.|.++.+++.
T Consensus       280 ~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~~~p~i~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~l~  359 (502)
T TIGR00887       280 HFFKWRHGKHLLGTAGSWFLLDIAFYGVNLNQKVILSAIGYSPPAATNNAYEELYKTAVGNLIIALAGTVPGYWVTVFLV  359 (502)
T ss_pred             HHhhhHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHcCCCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence            2    2222222222222110 01  111123445567788764211           1 23345567778999999999


Q ss_pred             HHhchhhHHHHHHHHHHHHHHHHHHHHhcCCCcCcchHHHHHHHHHHhhhhhhhhhhhhhHHhhccCCcccchhHHHHHH
Q 015168          271 RRLGILKAGAAGLIFQASLLAMAVAVYWSGSLSQQNPLLFFLCLIVLSRLGHMSYDIVGAQILQTGIPSSKANLIGTTEI  350 (412)
Q Consensus       271 ~R~g~~r~~~~~~~~~~~~l~~~v~~~~~g~~~~~~~~~l~~~g~~~sr~GLw~~dl~~~~l~Q~~vp~~~~G~v~g~~~  350 (412)
                      +|+|+++...++.....++.......... . +......++.........|.  .+ ....+..|..|++.||+..|+.+
T Consensus       360 dr~gRR~~l~~~~~~~~~~~~~l~~~~~~-~-~~~~~~~~~~~~~~~~~~~~--~~-~~~~~~~E~~p~~~R~~~~g~~~  434 (502)
T TIGR00887       360 DIIGRKPIQLMGFFILTVLFFVLGFAYNH-L-STHGFLAIYVLAQFFANFGP--NA-TTFIVPGEVFPTRYRSTAHGISA  434 (502)
T ss_pred             hhhcchhHHHHHHHHHHHHHHHHHHHHHh-c-chhHHHHHHHHHHHHHhcCC--Cc-hhhhhhhccCchhHHHHHHHHHH
Confidence            99999988776655443332221111111 0 00111111111111112222  11 22334578889999999999999


Q ss_pred             HHHHHHHHHHHHHHHhccC
Q 015168          351 SVASLVESVMLGVAIIAND  369 (412)
Q Consensus       351 sl~~~~~ll~~~~~~~~~~  369 (412)
                      +.++....+........-+
T Consensus       435 ~~~~~~~~~~~~~~~~l~~  453 (502)
T TIGR00887       435 ASGKAGAIIGQFGFLYLAQ  453 (502)
T ss_pred             HHhhhHHHHHHHHhhhhhc
Confidence            9999877766665544434

This model represents the phosphate uptake symporter subfamily of the major facilitator superfamily (pfam00083).

>COG2807 CynX Cyanate permease [Inorganic ion transport and metabolism]

Probab=99.06  E-value=3.1e-07  Score=90.35  Aligned_cols=306  Identities=18%  Similarity=0.157  Sum_probs=186.6

Q ss_pred             CchhhHHHHHHhh---hhhcchhccCCcHHHHHHHHHHHHHHHHHHHHHHHHHhccccccccchhHHHHHHHHHHHHHHH
Q 015168            1 MGFFSKLILIVGG---PLVGKLMDHSPRIPAYICLNTVQAAAQLLSAAMIIHAHTVIPTSSSMLLHPWFFVLVLAGAVER   77 (412)
Q Consensus         1 ~g~~~~lp~ll~g---~~~G~~vDr~~R~~v~~~~~~~q~~~v~~s~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~   77 (412)
                      .|+.+++|.+.||   +++..+.-|..-.|.+..+.+.-    +  ...+.-....        .+.+|.-..+.|+.-.
T Consensus        49 aGlLTtLPll~fg~~ap~a~~Lar~~g~er~l~~~Llli----~--~G~~iR~~~~--------~~~L~~gt~l~G~gIa  114 (395)
T COG2807          49 AGLLTTLPLLAFGLFAPAAPRLARRFGEERSLFLALLLI----A--AGILIRSLGG--------LPLLFLGTLLAGAGIA  114 (395)
T ss_pred             HHHHHHHHHHHHHHHHhhhHHHHHHHhhHHHHHHHHHHH----H--HHHHHHhccc--------HHHHHHHHHHHHhhHH
Confidence            3778899988766   45566666666555544443311    1  1111221121        1357777888888888


Q ss_pred             HHhhhhhhhhcccceeeecCCCchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhc-ChhHHHHHHHHHHHHHHHHHHHH
Q 015168           78 LTGVALGVAVERDWAVLLAGINRPIALAKANAVLNRIDLLCEIAGASLFGILLSKY-EPVTCLKFAAGLIMWSLPVMIIL  156 (412)
Q Consensus        78 l~~~a~~~ai~RDwv~~l~~~~~~~~L~~~Ns~l~~id~v~~llgP~lgG~L~~~~-~~~~~~~~~~~~~~~s~~~~~~~  156 (412)
                      +.++-....|.||     +++    +...+..........+..+||.+.=.+.+.. ||+.++.+   |...++...  +
T Consensus       115 v~nVLLPslIK~~-----Fpk----~~~~mtglYs~sl~~~aaLaa~lavpla~~~~gW~~aL~~---WAl~allAl--~  180 (395)
T COG2807         115 VINVLLPSLIKRD-----FPK----RVGLMTGLYSTSLGAGAALAAALAVPLAQHSGGWRGALGF---WALLALLAL--L  180 (395)
T ss_pred             HHHHhhhHHHHhh-----ccc----chhhHHhHHHHHHHHHHHHHhhhhhHHHHhhccHHHHHHH---HHHHHHHHH--H
Confidence            9999999999998     664    4566666666666666666766666666665 79987655   333333211  1


Q ss_pred             HHHhhhccccccccccccccccCCCCCCCCCCchhhhHHhHHHHHHhHHHHhcCCcchHHHH-HH---HHHHHhhhccch
Q 015168          157 TWFTNKISSGVLDRAKCSQSCCRTSNEGPVPDADNIVDVGIEAIKLGWKEYMQQPVLPASLA-YV---LLCLNVVLTPGS  232 (412)
Q Consensus       157 l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~v~~~~~~-~a---~l~~t~v~~~~~  232 (412)
                      .|    +|..  .|++... .       ..+.+             -=+.+||+|.-+.... ++   .+|.+ +.   +
T Consensus       181 ~W----lPq~--~r~~~~~-~-------~~~~~-------------~~~~vw~~~~aW~vtLfmGlqS~~~Y~-~~---~  229 (395)
T COG2807         181 IW----LPQA--LREQAAS-I-------ATKLV-------------SVRKVWRSPLAWQVTLFMGLQSLLYYI-VI---G  229 (395)
T ss_pred             HH----hhhc--ccccccc-c-------ccccc-------------cccccccCchhHHHHHHHHhhHHHHHH-HH---H
Confidence            22    2321  1111100 0       00000             0012577886555222 22   22211 12   1


Q ss_pred             HHHHHHHhcCCCCchhHHHhhHHHHHHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHH-HHhcCCCcCcchHH-H
Q 015168          233 LMTAFLTQRGLNPSIIGGFSGLCASMGVAATFLSAYLVRRLGILKAGAAGLIFQASLLAMAVA-VYWSGSLSQQNPLL-F  310 (412)
Q Consensus       233 ~~~~y~~~~gls~~~~G~~~~~~avggllGt~l~~~l~~R~g~~r~~~~~~~~~~~~l~~~v~-~~~~g~~~~~~~~~-l  310 (412)
                      -++.|..++|+|+.+-|.+.+...+..+..++..|.+.+|..-.|-.......  ++++.... .++++.    .+.+ .
T Consensus       230 WLP~ili~~G~sa~~aG~llsl~~l~~~~~~ll~P~la~R~~n~r~~~~~~~~--~~l~G~~G~~~~P~~----~~~lw~  303 (395)
T COG2807         230 WLPAILIDRGLSAAEAGSLLSLMQLAQLPTALLIPLLARRSKNQRPLVVLALL--LMLVGLVGLLLAPGQ----LPILWA  303 (395)
T ss_pred             HHHHHHHHcCCCHHHhhhHHHHHHHHHHHHHHHHHHHHHHhcccchHHHHHHH--HHHHHHHHHHHhhhh----HHHHHH
Confidence            25566778999999999999999999999999999999987766665544332  22222222 244432    1221 2


Q ss_pred             HHHHHHHhhhhhhhhhhhhhHHhhccCCcccchhHHHHHHHHHHHHHHHHHHHHHhccCCCchhH
Q 015168          311 FLCLIVLSRLGHMSYDIVGAQILQTGIPSSKANLIGTTEISVASLVESVMLGVAIIANDVSHFGF  375 (412)
Q Consensus       311 ~~~g~~~sr~GLw~~dl~~~~l~Q~~vp~~~~G~v~g~~~sl~~~~~ll~~~~~~~~~~~~~f~~  375 (412)
                      ++.|+   +.|. .|+++..-+-++...+++.++-+|..++.-|......+.+....+|-+.=.-
T Consensus       304 ~llG~---G~G~-~F~laL~li~~rs~~a~~Aa~LSgmaQg~GYllAa~GP~l~G~lhDa~gsw~  364 (395)
T COG2807         304 LLLGL---GQGG-AFPLALTLILLRSSDAAIAAALSGMAQGVGYLLAAFGPWLFGFLHDATGSWS  364 (395)
T ss_pred             HHHhC---ccch-HHHHHHHHHHhhcCChHHHHHHHHHhhhhhHHHHhhhhhhHhHHHHhcCChH
Confidence            33333   4456 7999999999999999999999999999999987777777777766554333

>TIGR00924 yjdL_sub1_fam amino acid/peptide transporter (Peptide:H+ symporter), bacterial

Probab=99.03  E-value=4.4e-07  Score=94.41  Aligned_cols=353  Identities=9%  Similarity=0.009  Sum_probs=166.6

Q ss_pred             HHHHHhhhhhcchhcc-CCcHHHHHHHHHHHHHHHHHHHHHHHHHhccccccccchhHHHHHHHHHHHHHHHHHhhhhhh
Q 015168            7 LILIVGGPLVGKLMDH-SPRIPAYICLNTVQAAAQLLSAAMIIHAHTVIPTSSSMLLHPWFFVLVLAGAVERLTGVALGV   85 (412)
Q Consensus         7 lp~ll~g~~~G~~vDr-~~R~~v~~~~~~~q~~~v~~s~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~l~~~a~~~   85 (412)
                      +...+..+..|.+.|| ++|||++..+.+...+.    ..  +......      . +.+++...+.|..+..+.... .
T Consensus        59 ~~~~~~~~~~G~laDr~~G~~~~l~~~~~~~~~g----~~--~~~~~~~------~-~~~~~~~~l~g~g~g~~~~~~-~  124 (475)
T TIGR00924        59 ALVYLLTSVGWWFGDRVWGTKKTMVLGGIVLMLG----HF--MLAMSIY------P-DLIFYGLGTIAVGSGLFKANP-S  124 (475)
T ss_pred             HHHHHHHhhHHHHHHhhcchHHHHHHHHHHHHHH----HH--HHHhccc------H-hHHHHHHHHHHhccccccCCH-H
Confidence            4456677788999999 79999988886644332    11  1111110      1 123333334454444433332 2


Q ss_pred             hhcccceeeecCCCchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhcChhHHHHHHHHHHHHHHHHHHHHHHHhhhccc
Q 015168           86 AVERDWAVLLAGINRPIALAKANAVLNRIDLLCEIAGASLFGILLSKYEPVTCLKFAAGLIMWSLPVMIILTWFTNKISS  165 (412)
Q Consensus        86 ai~RDwv~~l~~~~~~~~L~~~Ns~l~~id~v~~llgP~lgG~L~~~~~~~~~~~~~~~~~~~s~~~~~~~l~~~~~~~~  165 (412)
                      +...|    .++++++++..+..+.......++.++||.++|.+....||+.+|.+.+...+++...    ....++..+
T Consensus       125 ~~~a~----~~~~~~~~~r~~~~~~~~~~~niG~~ig~~l~g~l~~~~g~~~~f~~~~~~~~~~~l~----~~~~~~~~~  196 (475)
T TIGR00924       125 SMVGK----LYERGDMPRRDGGFTLFYMSINIGSFISPLLAGVIAENYGYHVGFNLAAVGMVIGLLT----FFAGRHMLR  196 (475)
T ss_pred             HHHHH----hcCCCCcccccceehhHHHHHHHHHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHH----HHHcccccc
Confidence            23335    3443221145567788888889999999999999999889999886644322222211    111111111


Q ss_pred             cccccccccccccCCCCCCCCCCchhhhHHhH----HHHHHhHH--------------------------------HHhc
Q 015168          166 GVLDRAKCSQSCCRTSNEGPVPDADNIVDVGI----EAIKLGWK--------------------------------EYMQ  209 (412)
Q Consensus       166 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~g~~--------------------------------~~~~  209 (412)
                      +.++++++.    ++++ +   +..+.....+    .....+|.                                ..-|
T Consensus       197 ~~~~~~~~~----~~~~-~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  268 (475)
T TIGR00924       197 DIGSVPDPL----SGQG-K---TYGKLLLALLAALALVFFCAWLMHHVVIANILLMTVTLAVIIFFFRLAFKPRLDAVAR  268 (475)
T ss_pred             cCCCCCCCc----chhh-h---hhHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHhccCCHHHH
Confidence            011000000    0000 0   0000000000    00000000                                0001


Q ss_pred             CC--cchHHHHHHHHHHHhhhccchHHHHHHHh-cCCCCch----hHHHhhHHHHHHHHHHHHHH----HHHHH-hchhh
Q 015168          210 QP--VLPASLAYVLLCLNVVLTPGSLMTAFLTQ-RGLNPSI----IGGFSGLCASMGVAATFLSA----YLVRR-LGILK  277 (412)
Q Consensus       210 ~~--v~~~~~~~a~l~~t~v~~~~~~~~~y~~~-~gls~~~----~G~~~~~~avggllGt~l~~----~l~~R-~g~~r  277 (412)
                      ++  .+...+....+|..+....++..+.|.++ .+.+...    .+++.+.+++.-++..-+..    ++.|| .+...
T Consensus       269 ~~~~~~l~l~~~~~~~~~~~~Q~~s~l~l~~~~~~~~~~~~~~ip~~~~~~~n~~~iil~~p~~~~~~~~l~~~~~~~~~  348 (475)
T TIGR00924       269 NKMYAYIVLFLEAVVFWVLYAQMPTSLNFFADNNMHHEMLGMSVPVIWFQSLNPFWVVVGSPVLAMIWTRLGRKGKDPTT  348 (475)
T ss_pred             hHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHhccccccceEECHHHHHhhhHHHHHHHHHHHHHHHHHHHhCCCCCCc
Confidence            11  22223333334422123344445566653 3433222    67899999999988876644    44444 22222


Q ss_pred             HH--HHHHHHHHHHHHH-HHHHHhcCCCcCcchHHHHHHHHHHhhhhhhhhhhhhhHHhhccCCcccchhHHHHHHHHHH
Q 015168          278 AG--AAGLIFQASLLAM-AVAVYWSGSLSQQNPLLFFLCLIVLSRLGHMSYDIVGAQILQTGIPSSKANLIGTTEISVAS  354 (412)
Q Consensus       278 ~~--~~~~~~~~~~l~~-~v~~~~~g~~~~~~~~~l~~~g~~~sr~GLw~~dl~~~~l~Q~~vp~~~~G~v~g~~~sl~~  354 (412)
                      ..  .+|..+..++... .+......... ..+...+....++..+|--....+..++.-+..|+++||+..|++.....
T Consensus       349 ~~k~~~G~~l~~~~~~~~~~~~~~~~~~~-~~s~~~~i~~~~~~~~ge~~~~p~~~~~~~~~aP~~~~g~~~g~~~l~~~  427 (475)
T TIGR00924       349 PLKFTLGMLFCGASFLTFAASIWFADAGG-LTSPWFMVLIYLFQTLGELMISPLGLSWWTKIAPQRLMGQMLGMWFLAQA  427 (475)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHhhcCCCC-ccCHHHHHHHHHHHHHHHHHHhHHHHHHHHHhCCHHHHHHHHHHHHHHHH
Confidence            11  2333332222111 11111111100 12222222333344445444566667777778899999999999997777


Q ss_pred             HHHHHHHHHHHhccCCC-chhHHHHHHHHHHHHHHHH
Q 015168          355 LVESVMLGVAIIANDVS-HFGFLATLSLLSVVGAAWM  390 (412)
Q Consensus       355 ~~~ll~~~~~~~~~~~~-~f~~l~~~s~~~v~~~~~~  390 (412)
                      .-..+...+.....++. ..+....++......+..+
T Consensus       428 ~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  464 (475)
T TIGR00924       428 MGSLLGGYLATFGAVPQGVTGVFGKIGLVTLLVGVVM  464 (475)
T ss_pred             HHHHHHHHHHHHHhcccchhhHHHHHHHHHHHHHHHH
Confidence            65666555555544443 3333333343333344443

The model describes proton-dependent oligopeptide transporters in bacteria. This model is restricted in its range in recognizing bacterial proton-dependent oligopeptide transporters, although they are found in yeast, plants and animals. They function by proton symport in a 1:1 stoichiometry, which is variable in different species. All of them are predicted to contain 12 transmembrane domains, for which limited experimental evidence exists.

>TIGR01272 gluP glucose/galactose transporter

Probab=99.03  E-value=2.7e-07  Score=90.60  Aligned_cols=253  Identities=13%  Similarity=0.049  Sum_probs=143.1

Q ss_pred             HHHHHHHHHHhhhhhhhhcccceeeecCCCchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhh----------------c
Q 015168           70 VLAGAVERLTGVALGVAVERDWAVLLAGINRPIALAKANAVLNRIDLLCEIAGASLFGILLSK----------------Y  133 (412)
Q Consensus        70 ~~~g~~~~l~~~a~~~ai~RDwv~~l~~~~~~~~L~~~Ns~l~~id~v~~llgP~lgG~L~~~----------------~  133 (412)
                      ++.|+...+-+++...     |+..+.++|   +.++..+.++....++-++||.+++.++..                .
T Consensus        18 f~~g~G~~~lq~~~n~-----~v~~~~~~~---~~~~~l~~~~~~~~~G~~~gP~i~~~~i~~~~~~~~~~~~~~~~~~~   89 (310)
T TIGR01272        18 FVLASGLTILQVAANP-----YVSILGPIE---TAASRLALTQAFNKLGTTVAPLFGGSLILSGAGDLSMQVATANAEAA   89 (310)
T ss_pred             HHHHhhHHHHHhhHHH-----HHHHHCCcc---hHHHHHHHHHHHhhhHHHHHHHHHHHHHhcCCcchhhhhhhhhHHHH
Confidence            3455544444444333     222254433   688888999999999999999999999943                2


Q ss_pred             ChhHHHHHHHHHHHHHHHHHHHHHHHhhhccccccccccccccccCCCCCCCCCCchhhhHHhHHHHHHhHHHHhcCCcc
Q 015168          134 EPVTCLKFAAGLIMWSLPVMIILTWFTNKISSGVLDRAKCSQSCCRTSNEGPVPDADNIVDVGIEAIKLGWKEYMQQPVL  213 (412)
Q Consensus       134 ~~~~~~~~~~~~~~~s~~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~v~  213 (412)
                      .|+..+..++....+..   .  .+...+.||.+   +++.+   ++    +..+      .     . ..+..+++|.+
T Consensus        90 ~~~~~yl~ia~~~~~~~---i--~~~~~~~p~~~---~~~~~---~~----~~~~------~-----~-~~~~~~~~~~~  142 (310)
T TIGR01272        90 KVHTPYLLLAGALAVLA---I--IFAFLPLPELQ---EADVA---RV----SSGD------T-----T-QKTSAFQFTHL  142 (310)
T ss_pred             HHHHHHHHHHHHHHHHH---H--HHHHccCCCCC---ccccc---cc----cccc------c-----c-chhhHHhhHHH
Confidence            45555443222211111   1  11222344311   11100   00    0000      0     0 01123556665


Q ss_pred             hHHHHHHHHHHHhhhccchHHHHHHHh---cCCCCchhHHHhhHHHHHHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHH
Q 015168          214 PASLAYVLLCLNVVLTPGSLMTAFLTQ---RGLNPSIIGGFSGLCASMGVAATFLSAYLVRRLGILKAGAAGLIFQASLL  290 (412)
Q Consensus       214 ~~~~~~a~l~~t~v~~~~~~~~~y~~~---~gls~~~~G~~~~~~avggllGt~l~~~l~~R~g~~r~~~~~~~~~~~~l  290 (412)
                      .-++..-++|...-.+..+-...|+++   .|+++.+.+...+....+.++|.++.+++.+|+|.+|...++.....++.
T Consensus       143 ~l~~~~~f~yvg~e~~~~~w~~~yl~~~~~~g~s~~~a~~~~s~~~~~~~iGr~~~~~l~~r~g~~~~l~~~~~l~~~~~  222 (310)
T TIGR01272       143 VLGALGIFVYVGAEVSAGSFLVNFLSDPHALGLPEDQAAHFTAYTWGGAMVGRFIGSAVMPMISQGRYLAFNAFLAVLLS  222 (310)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHH
Confidence            555444444532123445567888863   59999999999999999999999999999999999998876655433222


Q ss_pred             HHHHHHHhcCCCcCcchHHHHHHHHHHhhhhhhhhhhhhhHHhhccCCcccchhHHHHHHHHHHHHHHHHHHHHHhccC
Q 015168          291 AMAVAVYWSGSLSQQNPLLFFLCLIVLSRLGHMSYDIVGAQILQTGIPSSKANLIGTTEISVASLVESVMLGVAIIAND  369 (412)
Q Consensus       291 ~~~v~~~~~g~~~~~~~~~l~~~g~~~sr~GLw~~dl~~~~l~Q~~vp~~~~G~v~g~~~sl~~~~~ll~~~~~~~~~~  369 (412)
                      ..  .....+.   .....+++.|.   ..+. +++.......|+  .+++.|+.+++. .+...-+.+.+.+.+...|
T Consensus       223 ~l--~~~~~~~---~~~~~~~l~g~---~~s~-i~P~~~s~a~~~--~~~~~~~asai~-~~~~~Gg~i~P~l~G~lad  289 (310)
T TIGR01272       223 IG--AALTHGY---VAMWFVLALGL---FNSI-MFPTIFSLALNA--LGRHTSQGSGIL-CLAIVGGAIVPLLQGSLAD  289 (310)
T ss_pred             HH--HHHcCCH---HHHHHHHHHHH---HHHH-HHHHHHHHHHhh--hhhhhhhhHHHH-HHHHhcchHHHHHHHHHHH
Confidence            11  1222211   11122222333   3344 688888888887  666778888875 4555545555554444444

Disruption of the loci leads to the total loss of glucose or galactose uptake in E.coli. Putative transporters in other bacterial species were isolated by functional complementation, which restored it functional activity.

>KOG2615 consensus Permease of the major facilitator superfamily [General function prediction only]

Probab=99.03  E-value=1.2e-08  Score=100.62  Aligned_cols=314  Identities=15%  Similarity=0.050  Sum_probs=152.4

Q ss_pred             HHHHHHhhhhhcchhccCCcHHHHHHHHHHHHHHHHHHHHHHHHHhccccccccchhHHHHHHH-HHHHHHHHHHhhhhh
Q 015168            6 KLILIVGGPLVGKLMDHSPRIPAYICLNTVQAAAQLLSAAMIIHAHTVIPTSSSMLLHPWFFVL-VLAGAVERLTGVALG   84 (412)
Q Consensus         6 ~lp~ll~g~~~G~~vDr~~R~~v~~~~~~~q~~~v~~s~~~~~~~~~~~~~~~~~~~~~l~~~~-~~~g~~~~l~~~a~~   84 (412)
                      .+-+.+-++..|.|.||++||+++..|.+.    ++++..  +|....       . ...|+.+ ++.|+..-.-  ...
T Consensus        78 ~ilQ~~sS~~~G~~SD~yGRkpvll~c~~~----va~s~l--l~~~S~-------~-F~afv~aR~l~Gi~kgnl--~v~  141 (451)
T KOG2615|consen   78 SILQFISSPLWGCLSDRYGRKPVLLACLIG----VALSYL--LWALSR-------N-FAAFVLARFLGGIFKGNL--SVI  141 (451)
T ss_pred             HHHHHHhhhhhhhhhhhhCchHHHHHHHHH----HHHHHH--HHHHHH-------H-HHHHHHHHHhhhhccCch--HHH
Confidence            345678899999999999999999888663    233332  222221       1 1233332 2333333222  333


Q ss_pred             hhhcccceeeecCCCchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhc---C-hhHHH--HHHHHHHHHHHHHHHHHHH
Q 015168           85 VAVERDWAVLLAGINRPIALAKANAVLNRIDLLCEIAGASLFGILLSKY---E-PVTCL--KFAAGLIMWSLPVMIILTW  158 (412)
Q Consensus        85 ~ai~RDwv~~l~~~~~~~~L~~~Ns~l~~id~v~~llgP~lgG~L~~~~---~-~~~~~--~~~~~~~~~s~~~~~~~l~  158 (412)
                      +|+.-|    ++.++   +-.+..+.+....++.-++||++||.+.++.   + .+.++  ++...+++.-.   ..+. 
T Consensus       142 rAiisd----V~sek---~r~l~ms~v~~a~~lGfilGPmIGgyla~f~~~~g~~p~alP~~~v~i~a~~~v---~~~~-  210 (451)
T KOG2615|consen  142 RAIISD----VVSEK---YRPLGMSLVGTAFGLGFILGPMIGGYLAQFSSISGSYPFALPCLLVFILAAGDV---TFFP-  210 (451)
T ss_pred             HHHHHh----hcChh---hccceeeeeehhhhcchhhcchhhhHHHhhHhhhccCchHHHHHHHHHHHHHHH---HHHH-
Confidence            555556    77653   6788999999999999999999999998822   1 11111  11111111101   1111 


Q ss_pred             HhhhccccccccccccccccCCCCCCCCCCchhhhHHhHHHHHHhHHHHhcCCcchH----HHHHHHHHHH---hhhccc
Q 015168          159 FTNKISSGVLDRAKCSQSCCRTSNEGPVPDADNIVDVGIEAIKLGWKEYMQQPVLPA----SLAYVLLCLN---VVLTPG  231 (412)
Q Consensus       159 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~v~~~----~~~~a~l~~t---~v~~~~  231 (412)
                        -++|| ++|.+|+.++. .  +-++..+-++  +...-+..+- -...|||-.+.    -..+++.|+.   ..+.+.
T Consensus       211 --~~lpE-TL~~rk~~~~~-~--~~~~~~~~~~--~~~~~~~~~~-v~~lrn~p~~~~i~~~~i~~l~~~ly~~l~s~~~  281 (451)
T KOG2615|consen  211 --WFLPE-TLPLRKRNDEH-S--TLQEAADDRL--ALLKFARIFK-VAALRNPPLLDFISVLRIFGLHYFLYLELFSGLE  281 (451)
T ss_pred             --HhCCc-cccchhhcccc-c--chhhhhhhhh--hhcchhhhhh-hhhhcCccccchHHHHHHHHHHHHHHHHHHHHHH
Confidence              35677 66554443110 0  0000000000  0000000000 01234444333    1123333321   012222


Q ss_pred             hHHHHHHH-hcCCCCchhHHHhhHHHHHHHH-HHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHHhcCCCcCcchHH
Q 015168          232 SLMTAFLT-QRGLNPSIIGGFSGLCASMGVA-ATFLSAYLVRRLGILKAGAAGLIFQASLLAMAVAVYWSGSLSQQNPLL  309 (412)
Q Consensus       232 ~~~~~y~~-~~gls~~~~G~~~~~~avggll-Gt~l~~~l~~R~g~~r~~~~~~~~~~~~l~~~v~~~~~g~~~~~~~~~  309 (412)
                      +....|-. ..|+++.+.|-++...++++.. .-.++|++.+-.|..+....-   -..+.++..+.+....    .+..
T Consensus       282 ~t~~~l~~~rfg~ss~~~G~vl~~tGl~m~~~ql~~~~~l~~~~~~~~a~l~~---~l~~~vP~~llls~~~----~~~~  354 (451)
T KOG2615|consen  282 NTVLFLTHGRFGYSSMQQGKVLSTTGLLMLVIQLALVPILPRYKGNIKAVLLF---SLLLIVPAFLLLSLAR----TPVV  354 (451)
T ss_pred             hhHHHhhcCccCCChhhheeeeehhhHHHHHHHHhccccccccccchhhHHHH---HHHHHHHHHHHHhccc----cchh
Confidence            22222222 3799999999999888877764 334444444434332222211   1122222222111111    1111


Q ss_pred             HHHHHHHHhhhhhhhhhhh-hhHHhhccCCcccchhHHHHHHHHHHHHHHHHHHHH
Q 015168          310 FFLCLIVLSRLGHMSYDIV-GAQILQTGIPSSKANLIGTTEISVASLVESVMLGVA  364 (412)
Q Consensus       310 l~~~g~~~sr~GLw~~dl~-~~~l~Q~~vp~~~~G~v~g~~~sl~~~~~ll~~~~~  364 (412)
                      +..+...-+-.+  ..-++ .+.+.....|+++||++||+.+|+....-.+.++..
T Consensus       355 l~~~s~l~sf~~--A~~vt~Lt~Lv~~~~~~~qrG~~~Gi~~Sl~alaRaiGPlv~  408 (451)
T KOG2615|consen  355 LYLGSTLKSFST--ASVVTCLTSLVHKYGPQSQRGTLNGIFRSLGALARAIGPLVS  408 (451)
T ss_pred             hhHHHHHHHHHH--HHhhHHHHHHHHhcCCcccchHHHHHHHHHHHHHHHhhhhhh
Confidence            221111111111  12233 334444456999999999999999998776666665

>PRK11462 putative transporter; Provisional

Probab=99.00  E-value=6.8e-07  Score=92.59  Aligned_cols=227  Identities=9%  Similarity=0.017  Sum_probs=122.4

Q ss_pred             HhhhhhcchhccC----CcHHH-HHHHHHHHHHHHHHHHHHHHHHhccccccccchhHHHHH-HHHHHHHHHHHHhhhhh
Q 015168           11 VGGPLVGKLMDHS----PRIPA-YICLNTVQAAAQLLSAAMIIHAHTVIPTSSSMLLHPWFF-VLVLAGAVERLTGVALG   84 (412)
Q Consensus        11 l~g~~~G~~vDr~----~R~~v-~~~~~~~q~~~v~~s~~~~~~~~~~~~~~~~~~~~~l~~-~~~~~g~~~~l~~~a~~   84 (412)
                      +.-|.+|.++||.    +|||- +..+-+    ..++++. +++  ...+.+. .....++. .-++....-.+.++...
T Consensus        60 i~Dp~~G~~~D~t~~r~Gr~rp~il~g~i----~~~i~~~-llf--~~p~~s~-~~~~~y~~~~~~~~~~~~t~~~ipy~  131 (460)
T PRK11462         60 ISDPCMGLLADRTRSRWGKFRPWVLFGAL----PFGIVCV-LAY--STPDLSM-NGKMIYAAITYTLLTLLYTVVNIPYC  131 (460)
T ss_pred             HHhhhheehhccCCCCCCCcchhHhHHHH----HHHHHHH-HHH--hCCCCCc-chHHHHHHHHHHHHHHHHHHHhccHH
Confidence            4568899999984    45443 444433    1222232 122  1111111 11112222 22344555555555543


Q ss_pred             hhhcccceeeecCCCchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhcC-------hhHHHHHHHHHHHHHHHHHHHHH
Q 015168           85 VAVERDWAVLLAGINRPIALAKANAVLNRIDLLCEIAGASLFGILLSKYE-------PVTCLKFAAGLIMWSLPVMIILT  157 (412)
Q Consensus        85 ~ai~RDwv~~l~~~~~~~~L~~~Ns~l~~id~v~~llgP~lgG~L~~~~~-------~~~~~~~~~~~~~~s~~~~~~~l  157 (412)
                      .     |.+++.+|.  +|-+++++.-+....++.+++|.+...++...|       |.....+.+....+..      .
T Consensus       132 a-----l~~~lt~d~--~eRt~l~s~r~~~~~iG~~~~~~~~~plv~~~g~~~~~~g~~~~~~i~~ii~~i~~------~  198 (460)
T PRK11462        132 A-----LGGVITNDP--TQRISLQSWRFVLATAGGMLSTVLMMPLVNLIGGDNKPLGFQGGIAVLSVVAFMML------A  198 (460)
T ss_pred             H-----HHHHhcCCH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCchhhhHHHHHHHHHHHHHHHH------H
Confidence            3     666677753  478999998888888888888888877776554       3332222111111111      1


Q ss_pred             HHhhhccccccccccccccccCCCCCCCCCCchhhhHHhHHHHHHhHHHHhcCCcchHHHHHHHHHHHhhhccchHHHHH
Q 015168          158 WFTNKISSGVLDRAKCSQSCCRTSNEGPVPDADNIVDVGIEAIKLGWKEYMQQPVLPASLAYVLLCLNVVLTPGSLMTAF  237 (412)
Q Consensus       158 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~v~~~~~~~a~l~~t~v~~~~~~~~~y  237 (412)
                      ......+|    +++++          .  + +    .   ..++.++..++||.++..+...+++........+....|
T Consensus       199 i~~~~~kE----~~~~~----------~--~-~----~---~~~~~l~~~~~Nk~~~~l~~~~~~~~~~~~~~~~~~~y~  254 (460)
T PRK11462        199 FCFFTTKE----RVEAP----------P--T-T----T---SMREDLRDIWQNDQWRIVGLLTIFNILAVCVRGGAMMYY  254 (460)
T ss_pred             HHHhccee----ccCCC----------c--c-C----C---CHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHhHhhhh
Confidence            12222222    11000          0  0 0    0   134577888899988875544433321012223334445


Q ss_pred             HHh-cCCCCchhHHHhhHHHHHHHHHHHHHHHHHHHhchhhHHHHHH
Q 015168          238 LTQ-RGLNPSIIGGFSGLCASMGVAATFLSAYLVRRLGILKAGAAGL  283 (412)
Q Consensus       238 ~~~-~gls~~~~G~~~~~~avggllGt~l~~~l~~R~g~~r~~~~~~  283 (412)
                      .++ .| ++...+.+.....+++++|+.+.+++.+|+|.++...++.
T Consensus       255 ~~y~~g-~~~~~~~~l~~~~i~~iig~~l~~~l~~r~gkk~~~~~~~  300 (460)
T PRK11462        255 VTWILG-TPEVFVAFLTTYCVGNLIGSALAKPLTDWKCKVTIFWWTN  300 (460)
T ss_pred             hhhhcC-ChHHHHHHHHHHHHHHHHHHHHHHHHHHHhChHHHHHHHH
Confidence            554 45 4455777888888999999999999999999877765443

>PF03825 Nuc_H_symport: Nucleoside H+ symporter

Probab=98.99  E-value=1.7e-06  Score=88.13  Aligned_cols=148  Identities=15%  Similarity=0.171  Sum_probs=99.4

Q ss_pred             HHhcCCcchHHHHHHHHH-HHhhhccchHHHHHHHhcC-CCCchhHHHhhHHHHHHHHHHHHHHHHHHHhchhhHHHHHH
Q 015168          206 EYMQQPVLPASLAYVLLC-LNVVLTPGSLMTAFLTQRG-LNPSIIGGFSGLCASMGVAATFLSAYLVRRLGILKAGAAGL  283 (412)
Q Consensus       206 ~~~~~~v~~~~~~~a~l~-~t~v~~~~~~~~~y~~~~g-ls~~~~G~~~~~~avggllGt~l~~~l~~R~g~~r~~~~~~  283 (412)
                      .++|||.++.-+..+.+. .+ -..+.+....|++++| .+....|...+.+.+..+.-=+..+|+.||+|..+.+.++.
T Consensus       202 ~llk~~~~~~Fll~~~l~~~~-~~~~~~f~~~yl~~~gg~~~~~~g~~~~l~~~aEi~~f~~~~~~~~r~g~~~ll~~a~  280 (400)
T PF03825_consen  202 KLLKNPRFLVFLLAAFLIGIS-HAAYYTFFSIYLQELGGYSGSTIGILWALGVVAEIPFFFFSGRFLKRFGIKWLLLLAL  280 (400)
T ss_pred             HHhcCccHHHHHHHHHHHHHH-HHHHHHHHHHHHHHcccchhhHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHH
Confidence            478899887644444433 22 2334455778899987 89999999999999999999999999999999999988776


Q ss_pred             HHHHHHHHHHHHHHhcCCCcCcchHHHHHHHHHHh--hhhhhhhhhhhhHHhhccCCcccchhHHHHHHHHHHHHHHHH
Q 015168          284 IFQASLLAMAVAVYWSGSLSQQNPLLFFLCLIVLS--RLGHMSYDIVGAQILQTGIPSSKANLIGTTEISVASLVESVM  360 (412)
Q Consensus       284 ~~~~~~l~~~v~~~~~g~~~~~~~~~l~~~g~~~s--r~GLw~~dl~~~~l~Q~~vp~~~~G~v~g~~~sl~~~~~ll~  360 (412)
                      ....  +=-.+......+.  .....+...+..+-  .+|+  +-.+..++.++.+|++.|++.-++..++.++.+...
T Consensus       281 ~~~~--vR~~l~a~~~~~~--~~~~~~~~l~q~lhG~tf~~--~~~a~~~yi~~~~p~~~~at~Q~l~~~~~~Glg~~i  353 (400)
T PF03825_consen  281 VAYA--VRWLLYAYFSDPW--PFIVALQLLGQLLHGLTFGL--FHAASVRYIDRIAPPELRATAQGLYSALSFGLGGAI  353 (400)
T ss_pred             HHHH--HHHHHHHHhcCCc--HHHHHHHHHHHhhhhHHHHH--HHHHHHHHHHHhCCccchHHHHHHHHHHHhhHHHHH
Confidence            5322  1111122221221  11111111122222  2233  557888999999999999999999999998754433

>PRK10207 dipeptide/tripeptide permease B; Provisional

Probab=98.92  E-value=3.6e-06  Score=87.99  Aligned_cols=115  Identities=12%  Similarity=0.002  Sum_probs=70.4

Q ss_pred             HHhhhhhcchhcc-CCcHHHHHHHHHHHHHHHHHHHHHHHHHhccccccccchhHHHHHHHHHHHHHHHHHhhhhhhhhc
Q 015168           10 IVGGPLVGKLMDH-SPRIPAYICLNTVQAAAQLLSAAMIIHAHTVIPTSSSMLLHPWFFVLVLAGAVERLTGVALGVAVE   88 (412)
Q Consensus        10 ll~g~~~G~~vDr-~~R~~v~~~~~~~q~~~v~~s~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~l~~~a~~~ai~   88 (412)
                      .++.+..|.+.|| ++|||++....++..+...   + ..  +....     . ..+++...+.+...-..... ..++.
T Consensus        64 ~~~~~~~G~laDr~~G~r~~~~~g~~~~~~g~~---~-~~--~~~~~-----~-~ll~~~~~l~~ig~g~~~~~-~~~li  130 (489)
T PRK10207         64 YGLISIGGYVGDHLLGTKRTIVLGAIVLAIGYF---M-TG--MSLLK-----P-DLIFIALGTIAVGNGLFKAN-PASLL  130 (489)
T ss_pred             HHHHhhHHHhhhhccchHHHHHHHHHHHHHHHH---H-HH--Hhccc-----h-hHHHHHHHHHHhccccccCC-HHHHH
Confidence            3445688999999 8999998888765533211   1 11  11110     0 11222233333333333222 23344


Q ss_pred             ccceeeecCCCchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhcChhHHHHHH
Q 015168           89 RDWAVLLAGINRPIALAKANAVLNRIDLLCEIAGASLFGILLSKYEPVTCLKFA  142 (412)
Q Consensus        89 RDwv~~l~~~~~~~~L~~~Ns~l~~id~v~~llgP~lgG~L~~~~~~~~~~~~~  142 (412)
                      .|    .++++++ +..+..+.....-.++..+||.++|.+.+..||+.+|++.
T Consensus       131 ~~----~~p~~~~-~~~~~~~~~~~~~nig~~~g~~l~g~l~~~~gw~~~F~i~  179 (489)
T PRK10207        131 SK----CYPPKDP-RLDGAFTLFYMSINIGSLISLSLAPVIADKFGYSVTYNLC  179 (489)
T ss_pred             HH----hcCCCch-hhhcchhHHHHHHHHHHHHHHHHHHHHHHhhChHHHHHHH
Confidence            45    5654422 4566777888888899999999999999999999988653

>PF03209 PUCC: PUCC protein; InterPro: IPR004896 This protein is required for high-level transcription of the PUC operon

Probab=98.88  E-value=6e-06  Score=82.85  Aligned_cols=309  Identities=16%  Similarity=0.217  Sum_probs=182.7

Q ss_pred             hhhhhcchhccCC-----cHHH-HHHHHHHHHHHHHHHHHHHHHHhcc--cc-ccccchhHHH-HHHHHHHHHHHHHHhh
Q 015168           12 GGPLVGKLMDHSP-----RIPA-YICLNTVQAAAQLLSAAMIIHAHTV--IP-TSSSMLLHPW-FFVLVLAGAVERLTGV   81 (412)
Q Consensus        12 ~g~~~G~~vDr~~-----R~~v-~~~~~~~q~~~v~~s~~~~~~~~~~--~~-~~~~~~~~~l-~~~~~~~g~~~~l~~~   81 (412)
                      +-++.|..-|+++     ||.- ++...+.+.....+..- ..+....  ++ ....+....+ .+..++.|..-+..++
T Consensus        30 ~R~~~G~~SD~~~s~~G~rRtPyI~~G~~~~~~g~~~ap~-a~~~l~~~~~~~~~~~~~g~~~a~l~F~l~G~G~~~s~T  108 (403)
T PF03209_consen   30 LRVWFGHRSDTHPSILGWRRTPYIWGGTLLQAGGLAIAPF-ALLLLAESGQQSSGPFWLGLALAALAFLLYGLGVHASGT  108 (403)
T ss_pred             HHHHhccccccCcccCcCCchhhhHHHHHHHHHHHHHHHH-HHHHHcccccccccccHHHHHHHHHHHHHHHhhHhHhHH
Confidence            4578999999999     7776 44444445443222111 1222222  11 1111221111 2223356666666666


Q ss_pred             hhhhhhcccceeeecCCCchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhcChhHHHHHHHHHHHHHHHHHHHHHHHhh
Q 015168           82 ALGVAVERDWAVLLAGINRPIALAKANAVLNRIDLLCEIAGASLFGILLSKYEPVTCLKFAAGLIMWSLPVMIILTWFTN  161 (412)
Q Consensus        82 a~~~ai~RDwv~~l~~~~~~~~L~~~Ns~l~~id~v~~llgP~lgG~L~~~~~~~~~~~~~~~~~~~s~~~~~~~l~~~~  161 (412)
                      +. .|...|    +++++   +..|+-+.+=.+..+.-+++..+.|.++.-+++.--.-+.-....+.+....+-+|   
T Consensus       109 ~~-lALl~D----~~~e~---~R~~~v~ivw~Mli~G~iv~ai~~g~lL~~~s~~rL~~v~~~~a~i~~~l~~ia~w---  177 (403)
T PF03209_consen  109 SF-LALLAD----LAPEE---RRPRVVAIVWVMLIVGIIVSAIVFGRLLDPFSPERLIQVIQGVALIALLLNLIALW---  177 (403)
T ss_pred             HH-HHHHHh----cCCHh---hhhhhHHHHHHHHHHHHHHHHHHHHHHccccCHHHHHHHHHHHHHHHHHHHHHHHH---
Confidence            55 344456    66653   67888888888888999999999999998877665333333333333332222222   


Q ss_pred             hccccccccccccccccCCCCCCCCCCchhhhHHhHHHHHHhHHHHhcCCcchHHHHHHHHHHHhhhccchHHHHHHHh-
Q 015168          162 KISSGVLDRAKCSQSCCRTSNEGPVPDADNIVDVGIEAIKLGWKEYMQQPVLPASLAYVLLCLNVVLTPGSLMTAFLTQ-  240 (412)
Q Consensus       162 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~v~~~~~~~a~l~~t~v~~~~~~~~~y~~~-  240 (412)
                      +.++ .  .+++.    +++   ++++         ...++.|+.++++|..+.-+.+-++.....+.-|.+.-.|.-+ 
T Consensus       178 g~E~-r--~~~~~----~~~---~~~~---------~~f~~a~~~~~~~~~a~~f~~fl~l~t~a~~~QD~iLEPygg~V  238 (403)
T PF03209_consen  178 GQEP-R--RSRRA----AAA---ERPR---------PPFREAWRQVWASPQARRFFVFLFLGTLAFFMQDVILEPYGGEV  238 (403)
T ss_pred             hccc-C--Ccccc----cCC---CCCC---------ccHHHHHHHHHhCCChhHHHHHHHHHHHHHHhhHHHcCCchhHH
Confidence            2211 1  01110    000   0011         1234688999999988875554444421123346677778865 


Q ss_pred             cCCCCchhHHHhhHHHHHHHHHHHHHHHHHH-HhchhhHHHHHHHHHHHHHHHHHHHHhcCCCcCcchHHHHHHHHHHhh
Q 015168          241 RGLNPSIIGGFSGLCASMGVAATFLSAYLVR-RLGILKAGAAGLIFQASLLAMAVAVYWSGSLSQQNPLLFFLCLIVLSR  319 (412)
Q Consensus       241 ~gls~~~~G~~~~~~avggllGt~l~~~l~~-R~g~~r~~~~~~~~~~~~l~~~v~~~~~g~~~~~~~~~l~~~g~~~sr  319 (412)
                      +|+|+.+---+-+.-+.|.++|=.+.+++.. |.+..|+-.++...-..+....+.....++      ..++-.++++-+
T Consensus       239 fgmsv~eTT~Lta~~~~G~L~G~~~~g~~l~~~~~~~~~a~~G~~~~~~~f~lii~a~~~~~------~~~~~~~~~l~G  312 (403)
T PF03209_consen  239 FGMSVGETTRLTAFWGGGTLLGMLLAGFLLSRRLGKKRTAALGCLLGALAFALIILAGPLGS------PWLFRPGVFLLG  312 (403)
T ss_pred             cCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCchHHHHHHHHHHHHHHHHHHHHHhccc------chHHHHHHHHHH
Confidence            8999999888888888888888888887755 788877766666543333333222222222      122223333334


Q ss_pred             hhhhhhhhhhhHHhhccCCcccchhHHHHHHHHHHHHH
Q 015168          320 LGHMSYDIVGAQILQTGIPSSKANLIGTTEISVASLVE  357 (412)
Q Consensus       320 ~GLw~~dl~~~~l~Q~~vp~~~~G~v~g~~~sl~~~~~  357 (412)
                      +|--.|.+.....+-+.+.+++.|..-|..+..|-..-
T Consensus       313 ~g~G~f~vgals~mM~lt~~~~aG~~mG~WGaaQA~A~  350 (403)
T PF03209_consen  313 LGNGLFTVGALSLMMDLTSAGRAGLFMGAWGAAQAIAR  350 (403)
T ss_pred             HhhhHHHHHHHHHHHhCCCCcchhHHHHHHHHHHHHHH
Confidence            45555999999999999999999999999999998743

It is an integral membrane protein. The family includes other proteins form Rhodobacter eg. bacteriochlorophyll synthase.

>COG2270 Permeases of the major facilitator superfamily [General function prediction only]

Probab=98.87  E-value=2.5e-06  Score=85.64  Aligned_cols=160  Identities=15%  Similarity=0.146  Sum_probs=104.9

Q ss_pred             HHhHHHHHHhHHHHhcCCcchHHHHHH-HHH---HHhhhccchHHHHHHH-hcCCCCchhHHHhhHHHHHHHHHHHHHHH
Q 015168          194 DVGIEAIKLGWKEYMQQPVLPASLAYV-LLC---LNVVLTPGSLMTAFLT-QRGLNPSIIGGFSGLCASMGVAATFLSAY  268 (412)
Q Consensus       194 ~~~~~~~~~g~~~~~~~~v~~~~~~~a-~l~---~t~v~~~~~~~~~y~~-~~gls~~~~G~~~~~~avggllGt~l~~~  268 (412)
                      ...++++.+-+++.++|+-+.- +..+ ++|   .+...   +....|.+ .+|++..++.++-....+.++.|++++|+
T Consensus       235 ~~g~k~L~~t~k~i~~~~~i~~-FLiA~~~~~DGv~til---~~~~~fg~~~~gls~~~lll~g~~~~vvA~lg~ii~g~  310 (438)
T COG2270         235 RNGFKELKSTFKEIRGRKNLVL-FLIARFFYIDGVNTIL---AMGGVFGAADLGLSSTELLLIGIALSVVAALGAIIAGF  310 (438)
T ss_pred             HHHHHHHHHHHHHHhcccchHH-HHHHHHHHHhhHHHHH---HHHHHHHHHHcCccHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            3456677777888888884443 3332 233   21111   23677888 69999999999999999999999999999


Q ss_pred             HHHHhchhhHHHHHHHHHHHHHHHHHHHHhcCCCcCcchHHHHHHH-HHHhhhhhhhhhhhhhHHhhccCCcccchhHHH
Q 015168          269 LVRRLGILKAGAAGLIFQASLLAMAVAVYWSGSLSQQNPLLFFLCL-IVLSRLGHMSYDIVGAQILQTGIPSSKANLIGT  347 (412)
Q Consensus       269 l~~R~g~~r~~~~~~~~~~~~l~~~v~~~~~g~~~~~~~~~l~~~g-~~~sr~GLw~~dl~~~~l~Q~~vp~~~~G~v~g  347 (412)
                      |.+|+|.+++...++...   ...|+.......     +.-.+..| +++--+|-  .--...+++-+.+|+++-|+..|
T Consensus       311 Ld~rfg~k~vl~~~lvi~---~~~~~~~~~~~~-----~~~f~i~gll~g~s~G~--~qA~SRSy~~~lvp~~k~~~fFg  380 (438)
T COG2270         311 LDERFGSKPVLMIGLVIL---SIAALYLIFLEG-----ELDFWILGLLVGTSLGG--AQASSRSYLARLVPKGKEGRFFG  380 (438)
T ss_pred             HHHHhCCceeehHHHHHH---HHHHHHHHHccc-----cHHHHHHHHHHHHhcch--HHHHHHHHHHHhCCCccccceee
Confidence            999999999888776532   233333333222     11111112 11112222  22355677888899999999999


Q ss_pred             HHHHHHHHHHHHHHHHHHhc
Q 015168          348 TEISVASLVESVMLGVAIIA  367 (412)
Q Consensus       348 ~~~sl~~~~~ll~~~~~~~~  367 (412)
                      .++-.-.....+.+.++.+.
T Consensus       381 lyaltgra~S~~gp~lv~v~  400 (438)
T COG2270         381 LYALTGRAASFLGPFLVAVI  400 (438)
T ss_pred             hhhhhhhHHHHHHHHHHHHH
Confidence            99888777666555555444

>COG2211 MelB Na+/melibiose symporter and related transporters [Carbohydrate transport and metabolism]

Probab=98.86  E-value=2.8e-06  Score=87.27  Aligned_cols=236  Identities=14%  Similarity=0.099  Sum_probs=133.7

Q ss_pred             ceeeecCCCchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhcChhH-HHHHHHHHHHHHHHHHHHHHHHhhhccccccc
Q 015168           91 WAVLLAGINRPIALAKANAVLNRIDLLCEIAGASLFGILLSKYEPVT-CLKFAAGLIMWSLPVMIILTWFTNKISSGVLD  169 (412)
Q Consensus        91 wv~~l~~~~~~~~L~~~Ns~l~~id~v~~llgP~lgG~L~~~~~~~~-~~~~~~~~~~~s~~~~~~~l~~~~~~~~~~l~  169 (412)
                      +.|++..+  ++|-+++|++=+-.-.++.++.-.+-+.+++..+... ...+......++......++.+++.+.|+..+
T Consensus       136 l~~~iT~d--~~ER~~l~s~R~~~~~~g~~l~~~~~~plv~~~g~~~~~~g~~~~~~~~~vi~~i~~l~~~~~v~ER~~~  213 (467)
T COG2211         136 LGPEITQD--PQERASLTSWRMVFASLGGLLVAVLFPPLVKLFGGGDKALGYQGTALVLGVIGVILLLFCFFNVKERVVE  213 (467)
T ss_pred             cchhhcCC--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcchhhHHHHHHHHHHHHHHHHHHHHHHhhcccCc
Confidence            56667664  2379999999888888887777777777777665442 11111111122221112224455555552211


Q ss_pred             cccccccccCCCCCCCCCCchhhhHHhHHHHHHhHHHHhcCCcchHHHHHHHHHHHhhhcc-chHHHHHHHh-cCCCCch
Q 015168          170 RAKCSQSCCRTSNEGPVPDADNIVDVGIEAIKLGWKEYMQQPVLPASLAYVLLCLNVVLTP-GSLMTAFLTQ-RGLNPSI  247 (412)
Q Consensus       170 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~v~~~~~~~a~l~~t~v~~~-~~~~~~y~~~-~gls~~~  247 (412)
                      + ++.     +      +       ....+..+.+...++||-++--+.+.++++. .... ++.++-|.++ +|.++..
T Consensus       214 ~-~~~-----~------~-------~~~~~~~~~~~~~~~Nrp~~~~l~~~l~~~~-~~~i~~s~~~yy~~y~lg~~~l~  273 (467)
T COG2211         214 T-QPT-----K------T-------GVKLKLKDSFLLIFKNRPLLLLLLMNLLLFI-AFNIRGSIMVYYVTYVLGDPELF  273 (467)
T ss_pred             c-ccC-----c------c-------cccccHHHHHHHHHccchHHHHHHHHHHHHH-HHHHHhhhhheeEEEEcCChHHH
Confidence            1 100     0      0       0112344567788999999886665555533 1222 3445555654 8999998


Q ss_pred             hHHHhhHHHHHHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHHhcCCCcCcchHHHHHHHHHHhhhhhhhhhh
Q 015168          248 IGGFSGLCASMGVAATFLSAYLVRRLGILKAGAAGLIFQASLLAMAVAVYWSGSLSQQNPLLFFLCLIVLSRLGHMSYDI  327 (412)
Q Consensus       248 ~G~~~~~~avggllGt~l~~~l~~R~g~~r~~~~~~~~~~~~l~~~v~~~~~g~~~~~~~~~l~~~g~~~sr~GLw~~dl  327 (412)
                      .+........+.+.+..+.|++.||+|.+++..++.....   +.....++.+..+  ....++  ..+...+|.-..+.
T Consensus       274 ~~~~~~~~~~~~l~~~~~~p~L~~~~gkk~~~~~~~~~~~---i~~~~~~f~~~~~--~~l~~~--~~~i~~~g~~~~~~  346 (467)
T COG2211         274 AYLLLLASGAGLLIGLILWPRLVKKFGKKKLFLIGLLLLA---VGYLLLYFTPAGS--VVLIVV--ALIIAGVGTGIANP  346 (467)
T ss_pred             HHHHHHHHHHHHHHHHHhHHHHHHHhchHHHHHHHHHHHH---HHHHHHHhhcCcc--hHHHHH--HHHHHHHHhhcccc
Confidence            8899999999999999999999999999999888755322   2222333333211  111111  11122233322333


Q ss_pred             hhhHHhhccC-------CcccchhHHHHHHHHHHH
Q 015168          328 VGAQILQTGI-------PSSKANLIGTTEISVASL  355 (412)
Q Consensus       328 ~~~~l~Q~~v-------p~~~~G~v~g~~~sl~~~  355 (412)
                      ..-.++-+.+       -.+.-|...|.+...+..
T Consensus       347 l~wam~~d~vDyge~~TG~R~eGi~~s~~tF~~K~  381 (467)
T COG2211         347 LPWAMVADTVDYGEWKTGVRREGIVYSGMTFFRKL  381 (467)
T ss_pred             ccHHHhcchhhHHHHHhCCCchhhHHHHHHHHHHH
Confidence            3333333322       456778888888887776

>COG0738 FucP Fucose permease [Carbohydrate transport and metabolism]

Probab=98.86  E-value=4.4e-06  Score=83.44  Aligned_cols=317  Identities=15%  Similarity=0.083  Sum_probs=173.8

Q ss_pred             hhhHHHHHHhhhhhcchhccCCcHHHHHHHHHHHHHHHHHHHHHHHHHhccccccccchhHHHHHH-HHHHHHHHHHHhh
Q 015168            3 FFSKLILIVGGPLVGKLMDHSPRIPAYICLNTVQAAAQLLSAAMIIHAHTVIPTSSSMLLHPWFFV-LVLAGAVERLTGV   81 (412)
Q Consensus         3 ~~~~lp~ll~g~~~G~~vDr~~R~~v~~~~~~~q~~~v~~s~~~~~~~~~~~~~~~~~~~~~l~~~-~~~~g~~~~l~~~   81 (412)
                      |+..-.+.+.+.++|.++||..+|+.+......-++-    |. +.+-....      ..+..|++ ++++++.-.+.++
T Consensus        55 faff~gYf~~~lpa~~~~kk~gyk~gi~lgL~l~avg----~~-lF~pAa~~------~~y~~FL~~lFila~Gi~~Let  123 (422)
T COG0738          55 FAFFGGYFIMSLPAGLLIKKLGYKAGIVLGLLLYAVG----AA-LFWPAASS------KSYGFFLVALFILASGIGLLET  123 (422)
T ss_pred             HHHHHHHHHHhccHHHHHHHhhhHHHHHHHHHHHHHH----HH-HHhhhhhh------hhHHHHHHHHHHHHhhhHHHHh
Confidence            6777888999999999999999999988886643222    32 12211211      11233333 2334444433334


Q ss_pred             hhhhhhcccceeeecCCCchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhh-----cChhHHHHH-HHHHHHHHHH----
Q 015168           82 ALGVAVERDWAVLLAGINRPIALAKANAVLNRIDLLCEIAGASLFGILLSK-----YEPVTCLKF-AAGLIMWSLP----  151 (412)
Q Consensus        82 a~~~ai~RDwv~~l~~~~~~~~L~~~Ns~l~~id~v~~llgP~lgG~L~~~-----~~~~~~~~~-~~~~~~~s~~----  151 (412)
                      +...     ++..+-+++   .-++-...++.-...+.++||.+|+.++-.     .+....... ..-...+..+    
T Consensus       124 aaNp-----~v~~lg~~~---~a~~rlnl~q~fn~lGa~~gp~~g~~lils~~~~~~~~~~~~~~~~~~~~~v~~pYl~~  195 (422)
T COG0738         124 AANP-----YVTLLGKPE---SAAFRLNLAQAFNGLGAILGPLLGSSLILSGVALTMSAAQILAIKGADASSVQFPYLIL  195 (422)
T ss_pred             ccch-----HHHHhCCch---hHHHHHHHHHHhhhhHHHHHHHHHHHHHHhhhhhccCHHHHHHHHHHHHHhhhhHHHHH
Confidence            4322     222354432   345555577888889999999999999973     111110000 0000000000    


Q ss_pred             -HHHHHHHHh---hhccccccccccccccccCCCCCCCCCCchhhhHHhHHHHHHhHHHHhcCCcchHHHHHHHHHHHhh
Q 015168          152 -VMIILTWFT---NKISSGVLDRAKCSQSCCRTSNEGPVPDADNIVDVGIEAIKLGWKEYMQQPVLPASLAYVLLCLNVV  227 (412)
Q Consensus       152 -~~~~~l~~~---~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~v~~~~~~~a~l~~t~v  227 (412)
                       ...+++...   .|.|+     .++.+++       . .+        .+  ..+....+|||.++-+...-++|..+=
T Consensus       196 ~~~lvll~v~~~~~k~p~-----~~~~~~~-------~-~~--------~~--~~~~~~l~~~~~~~~gvl~~FlYVG~E  252 (422)
T COG0738         196 AGLLVLLAVLILLSKLPD-----LQVAAPS-------L-GA--------SG--SAGLSSLFQNKHLRLGVLAIFLYVGAE  252 (422)
T ss_pred             HHHHHHHHHHHHhccCCc-----CCccccc-------c-cc--------cc--cchHHHHHhChHHHHHHHHHHHHHhHH
Confidence             000011111   22322     1111000       0 00        00  015667889999999998889994422


Q ss_pred             hccchHHHHHHHh-cCCCCchhHHHhhHHHHHHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHHhcCCCcCcc
Q 015168          228 LTPGSLMTAFLTQ-RGLNPSIIGGFSGLCASMGVAATFLSAYLVRRLGILKAGAAGLIFQASLLAMAVAVYWSGSLSQQN  306 (412)
Q Consensus       228 ~~~~~~~~~y~~~-~gls~~~~G~~~~~~avggllGt~l~~~l~~R~g~~r~~~~~~~~~~~~l~~~v~~~~~g~~~~~~  306 (412)
                      ...++.++.|+.+ +|+++.+-....+.-=++.++|=++..++.+|+...|.......   +..++|......+.  .+.
T Consensus       253 va~gsfl~~y~~~~~g~~~~~aa~~~s~~~~~~~vGRFig~~lm~~~~~~k~Laf~a~---~~ill~~~~~l~~g--~v~  327 (422)
T COG0738         253 VAIGSFLVSYLEELLGLNEQQAAYYLSFFWVGFMVGRFIGSALMSRIKPEKYLAFYAL---IAILLLLAVALIGG--VVA  327 (422)
T ss_pred             HHHHHHHHHHHHhcCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHHH---HHHHHHHHHHHhcC--hHH
Confidence            2345568889876 89999999999999999999999999999999999998764432   22233333333332  122


Q ss_pred             hHHHHHHHHHHhhhhhhhhhhhhhHHhhccCCcccchhHHHHHHHHHHHHHHHHHHHHHhccCCCc
Q 015168          307 PLLFFLCLIVLSRLGHMSYDIVGAQILQTGIPSSKANLIGTTEISVASLVESVMLGVAIIANDVSH  372 (412)
Q Consensus       307 ~~~l~~~g~~~sr~GLw~~dl~~~~l~Q~~vp~~~~G~v~g~~~sl~~~~~ll~~~~~~~~~~~~~  372 (412)
                      ...++..|.+.|   . +|+...+...|..=  ++-...++...+-.-+-..+.++.+.+...-+.
T Consensus       328 ~~~l~~ig~F~s---i-mfPTIfslal~~l~--~~ts~~s~~l~maivGGAiiP~l~G~i~d~~g~  387 (422)
T COG0738         328 LYALFLIGLFNS---I-MFPTIFSLALKNLG--EHTSVGSGLLVMAIVGGAIIPPLQGVIADMFGI  387 (422)
T ss_pred             HHHHHHHHHHhH---H-HHHHHHHHHHhccC--ccccccceeeeeheecchHHHHHHHHHHHhhhh
Confidence            233334444443   3 57777777777633  333333443333333344445555555544333

>TIGR00805 oat sodium-independent organic anion transporter

Probab=98.82  E-value=2.1e-07  Score=100.16  Aligned_cols=263  Identities=11%  Similarity=0.036  Sum_probs=142.3

Q ss_pred             hHHHHHHhhhhhcchhccCCcHHHHHHHHHHHHHHHHHHHHHHHHHhc----cc-------------------c------
Q 015168            5 SKLILIVGGPLVGKLMDHSPRIPAYICLNTVQAAAQLLSAAMIIHAHT----VI-------------------P------   55 (412)
Q Consensus         5 ~~lp~ll~g~~~G~~vDr~~R~~v~~~~~~~q~~~v~~s~~~~~~~~~----~~-------------------~------   55 (412)
                      -.+..++..+++|.+.||.+|+|.+....++-.+.-.+...  .....    .+                   .      
T Consensus        77 ~~i~~~~~~i~v~~~~~r~~r~~~i~~g~ll~~lg~ll~al--phf~~~~y~~~~~~~~~~~~~~~~~~~c~~~~~~~~~  154 (633)
T TIGR00805        77 YEIGNLLLIIFVSYFGTKLHRPIVIGIGCAIMGLGSFLLSL--PHFLSGRYSYSTTVSSTGNLSSANSFLCMENLTQALR  154 (633)
T ss_pred             hhHHHHHHHHHHHHhhcccCcceEEEecHHHHHHHHHHHhC--hHHhcCCccccccccccccccccccccccCCCCCCcc
Confidence            45678889999999999999999877665533222111111  11000    00                   0      


Q ss_pred             --------c-ccc-chhHHHH-HHHHHHHHHHHHHhhhhhhhhcccceeeecCCCchhhhHHHHHHHHHHHHHHHHHHHH
Q 015168           56 --------T-SSS-MLLHPWF-FVLVLAGAVERLTGVALGVAVERDWAVLLAGINRPIALAKANAVLNRIDLLCEIAGAS  124 (412)
Q Consensus        56 --------~-~~~-~~~~~l~-~~~~~~g~~~~l~~~a~~~ai~RDwv~~l~~~~~~~~L~~~Ns~l~~id~v~~llgP~  124 (412)
                              . ..+ ...+.++ +.=++.|..+....+ ...++..|    .++++   +..+..+.+...-.+++.+||+
T Consensus       155 ~~~~~~~~~~~~~~~~~~~~~~~~r~l~GiG~~~~~~-~~~~~i~d----~~~~~---~~~~~~~i~~~~~~iG~~lG~l  226 (633)
T TIGR00805       155 PTQCPSECQKQHKESLMWLLFLVSQLLRGIGATPIFP-LGISYIDD----FAKSK---NSPLYIGILESIAVFGPAFGYL  226 (633)
T ss_pred             ccccccccccccCCCceehhhHHHHHHHhccCCcchh-cCchhhhc----cCCcc---ccHHHHHHHHHHHHhhhHHHHH
Confidence                    0 000 0011222 222344444433322 23344556    45543   6788899999999999999999


Q ss_pred             HHHHHHhhc-C---------------------hhHHHHHHHHHHHHHHHHHHHHHHHhhhcccccccccccc--ccccCC
Q 015168          125 LFGILLSKY-E---------------------PVTCLKFAAGLIMWSLPVMIILTWFTNKISSGVLDRAKCS--QSCCRT  180 (412)
Q Consensus       125 lgG~L~~~~-~---------------------~~~~~~~~~~~~~~s~~~~~~~l~~~~~~~~~~l~~~~~~--~~~~~~  180 (412)
                      ++|.+...+ +                     |+..|++.+...++..   +. +   ...|++.+++.++.  +...++
T Consensus       227 lgg~l~~~~~d~~~~~~~~~~l~~~dprWiGaWwl~Fli~g~l~~l~~---v~-l---~~~p~~lp~~~~~~~~~~~~~~  299 (633)
T TIGR00805       227 LGSFCLQIYVDTGSVNTEDVILTPTDPRWIGAWWIGFLICGGVALLTS---IP-F---FFFPKALPKEGKRVNVDVHETE  299 (633)
T ss_pred             HHHHHHhcccccccCCCCCCCCCCCCccHHHHHHHHHHHHHHHHHHHH---HH-H---HhCccccCCcccccchhhhhhh
Confidence            999998753 1                     4444443222222211   11 1   12232111110100  000000


Q ss_pred             C-CCCCCCCchhhhHHhHHHHHHhHHHHhcCCcchHHHHHHHHHHHhhhccchHHHHHHH-hcCCCCchhHHHhhHHHH-
Q 015168          181 S-NEGPVPDADNIVDVGIEAIKLGWKEYMQQPVLPASLAYVLLCLNVVLTPGSLMTAFLT-QRGLNPSIIGGFSGLCAS-  257 (412)
Q Consensus       181 ~-~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~v~~~~~~~a~l~~t~v~~~~~~~~~y~~-~~gls~~~~G~~~~~~av-  257 (412)
                      . ++....+ ........++..+.++.+++||.++.......+......++....+.|+. ++|+++...|++.+...+ 
T Consensus       300 ~~~~~~~~~-~~~~~~~~~~~~~~~~~Ll~n~~f~~~~l~~~~~~~~~~~~~~~lP~yl~~~~g~s~~~ag~l~~~~~i~  378 (633)
T TIGR00805       300 KLEKSEDKS-RKKNSDITKDFPKIIKRLLCNPIYMLVILAQVIDSLAFNGYITFLPKYLENQYGISSAEANFLIGVVNLP  378 (633)
T ss_pred             ccccccccc-chhhhhhHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcHHHHHHHhhhhhhh
Confidence            0 0000000 00001123455567889999999988555444432212344555777876 589999999999998776 


Q ss_pred             HHHHHHHHHHHHHHHhchh--hHHHHHHHH
Q 015168          258 MGVAATFLSAYLVRRLGIL--KAGAAGLIF  285 (412)
Q Consensus       258 ggllGt~l~~~l~~R~g~~--r~~~~~~~~  285 (412)
                      ++++|.++.+++.+|++..  +...++...
T Consensus       379 ~~~vG~~l~G~l~~r~~~~~~~~~~~~~~~  408 (633)
T TIGR00805       379 AAGLGYLIGGFIMKKFKLNVKKAAYFAICL  408 (633)
T ss_pred             HHHHHHhhhhheeeeecccHHHHHHHHHHH
Confidence            6789999999999999853  444444443

Proteins of the OAT family catalyze the Na+-independent facilitated transport of organic anions such as bromosulfobromophthalein and prostaglandins as well as conjugated and unconjugated bile acids (taurocholate and cholate, respectively). These transporters have been characterized in mammals, but homologues are present in C. elegans and A. thaliana. Some of the mammalian proteins exhibit a high degree of tissue specificity. For example, the rat OAT is found at high levels in liver and kidney and at lower levels in other tissues. These proteins possess 10-12 putative a-helical transmembrane spanners. They may catalyze electrogenic anion uniport or anion exchange.

>PRK15034 nitrate/nitrite transport protein NarU; Provisional

Probab=98.80  E-value=2.5e-05  Score=80.79  Aligned_cols=186  Identities=11%  Similarity=0.073  Sum_probs=92.3

Q ss_pred             hHHHHhcCCcchH-HHHHHHHHHHhhhccchHHHHHHHhcCCCCchhHHHhhHHHHHHHHHHHHHHHHHHHhchhhHHHH
Q 015168          203 GWKEYMQQPVLPA-SLAYVLLCLNVVLTPGSLMTAFLTQRGLNPSIIGGFSGLCASMGVAATFLSAYLVRRLGILKAGAA  281 (412)
Q Consensus       203 g~~~~~~~~v~~~-~~~~a~l~~t~v~~~~~~~~~y~~~~gls~~~~G~~~~~~avggllGt~l~~~l~~R~g~~r~~~~  281 (412)
                      .++..+|+|..+- ++.+.+.|-. -.+++..++.|.++ .+++........++.+.+.++..+.+++..|+|.+|+..+
T Consensus       244 ~~~~vlk~~~~Wllslly~~tFG~-fvg~s~~lp~~~~~-~~~~~~~l~~~~l~~l~~~l~rplgG~LADRiG~~~vl~~  321 (462)
T PRK15034        244 DQLPVLQRLHLWLLSLLYLATFGS-FIGFSAGFAMLAKT-QFPDVNILRLAFFGPFIGAIARSVGGAISDKFGGVRVTLI  321 (462)
T ss_pred             HHHHHhCCCchhHHHHHHHHHHHH-HHHHHHHHHHHHHH-HcChHHHHHHHHHHHHHHHHHHHhhHHHHHhcCchHHHHH
Confidence            4555788886554 4444444411 12334344455543 3343333222345567777788899999999999999888


Q ss_pred             HHHHHHHHHHHHHHHHhcCCCcCcchHHHHHHHH----HHhhhhhhhhhhhhhHHhhccCCc------------------
Q 015168          282 GLIFQASLLAMAVAVYWSGSLSQQNPLLFFLCLI----VLSRLGHMSYDIVGAQILQTGIPS------------------  339 (412)
Q Consensus       282 ~~~~~~~~l~~~v~~~~~g~~~~~~~~~l~~~g~----~~sr~GLw~~dl~~~~l~Q~~vp~------------------  339 (412)
                      +.+...++..+. ....+...  ..+...+..++    ++.++|    |=++-++.=+..|+                  
T Consensus       322 ~~i~~~i~~~~~-~l~lp~~~--~~~~~~~~~~~~~l~~~~G~g----ngsvfk~ip~~f~~~~~~~~~~~~~~~~~~~~  394 (462)
T PRK15034        322 NFIFMAIFSALL-FLTLPGTG--SGNFIAFYAVFMGLFLTAGLG----SGSTFQMIAVIFRQITIYRVKMKGGSDEQAQR  394 (462)
T ss_pred             HHHHHHHHHHHH-HHHhcccc--ccHHHHHHHHHHHHHHHhccc----chHHHHhhHHHHhhhhhhcccccccchhHHhh
Confidence            776433332221 12222211  11222222221    122222    11222121111121                  


Q ss_pred             ---ccchhHHHHHHHHHHHHHHHHH-HHHHhc-cCCCchhHHHHHHHHHHHHHHHHHHHHhcC
Q 015168          340 ---SKANLIGTTEISVASLVESVML-GVAIIA-NDVSHFGFLATLSLLSVVGAAWMFCHWLLN  397 (412)
Q Consensus       340 ---~~~G~v~g~~~sl~~~~~ll~~-~~~~~~-~~~~~f~~l~~~s~~~v~~~~~~~~~~~~~  397 (412)
                         ++.|.++|.-+++--.-+.+.+ +++... ...+.-+.+....+..+.+..+.+..|.||
T Consensus       395 ~~~~~~g~v~G~v~a~G~~Ggf~~p~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~w~~y~r~  457 (462)
T PRK15034        395 EAVTETAAALGFISAIGAVGGFFIPQAFGMSLNMTGSPVGAMKVFLIFYIVCVLLTWLVYGRR  457 (462)
T ss_pred             HHHHHHHHHHHHHHHHHHcccchhhHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHHHHHhccC
Confidence               2577777777776655333333 223222 223334445555555677777888888777

>PRK09584 tppB putative tripeptide transporter permease; Reviewed

Probab=98.80  E-value=1.3e-05  Score=83.90  Aligned_cols=119  Identities=12%  Similarity=-0.046  Sum_probs=69.7

Q ss_pred             hhhhcchhcc-CCcHHHHHHHHHHHHHHHHHHHHHHHHHhccccccccchhHHHHHHHHHHHHHHHHHhhhhhhhhcccc
Q 015168           13 GPLVGKLMDH-SPRIPAYICLNTVQAAAQLLSAAMIIHAHTVIPTSSSMLLHPWFFVLVLAGAVERLTGVALGVAVERDW   91 (412)
Q Consensus        13 g~~~G~~vDr-~~R~~v~~~~~~~q~~~v~~s~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~l~~~a~~~ai~RDw   91 (412)
                      .+..|.+.|| ++||+++....+...+.    ..  ...+....     . +.+++...+.+...-+.... ..++..| 
T Consensus        74 ~~~~G~LaDr~~G~r~~~~~g~~~~~ig----~~--l~~~~~~~-----~-~~l~~~~~l~gig~g~~~~~-~~~l~~~-  139 (500)
T PRK09584         74 VAIGGWLGDKVLGTKRVIMLGAIVLAIG----YA--LVAWSGHD-----A-GIVYMGMATIAVGNGLFKAN-PSSLLST-  139 (500)
T ss_pred             HHHHHHHHHhccchHHHHHHHHHHHHHH----HH--HHHHhccc-----H-HHHHHHHHHHHHhhhcccCC-HHHHHHH-
Confidence            4578999999 59999988776544332    11  11111110     1 11222223344433333222 2233344 


Q ss_pred             eeeecCCCchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhcChhHHHHHHHHHHHHH
Q 015168           92 AVLLAGINRPIALAKANAVLNRIDLLCEIAGASLFGILLSKYEPVTCLKFAAGLIMWS  149 (412)
Q Consensus        92 v~~l~~~~~~~~L~~~Ns~l~~id~v~~llgP~lgG~L~~~~~~~~~~~~~~~~~~~s  149 (412)
                         .++++++ +.+++.+.......++..+||.++|.+.+..||+..|.+......++
T Consensus       140 ---~f~~~~~-~~~~~~~~~~~~~~iG~~~gp~i~g~l~~~~g~~~~F~i~~i~~~i~  193 (500)
T PRK09584        140 ---CYEKDDP-RLDGAFTMYYMSINIGSFFSMLATPWLAAKYGWSVAFALSVVGMLIT  193 (500)
T ss_pred             ---hcCCCch-hhhhcchHHHHHHHHHHHHHHHHHHHHHHhhCHHHHHHHHHHHHHHH
Confidence               4554322 45667777778888999999999999999999999887644333333

>KOG1330 consensus Sugar transporter/spinster transmembrane protein [Carbohydrate transport and metabolism]

Probab=98.77  E-value=6.2e-08  Score=97.85  Aligned_cols=311  Identities=12%  Similarity=-0.015  Sum_probs=162.5

Q ss_pred             hhhHHHHHHhhhhhcchhccCCcHHHHHHHHHHHHHHHHHHHHHHHHHhccccccccchhHHHHHHHHHHHHHHHHHhhh
Q 015168            3 FFSKLILIVGGPLVGKLMDHSPRIPAYICLNTVQAAAQLLSAAMIIHAHTVIPTSSSMLLHPWFFVLVLAGAVERLTGVA   82 (412)
Q Consensus         3 ~~~~lp~ll~g~~~G~~vDr~~R~~v~~~~~~~q~~~v~~s~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~l~~~a   82 (412)
                      +...+.+.+++|..|.+.||++|+++|.+...+=..++.++..       ..      ..|.+.+.=-+.|..+...+..
T Consensus        75 ~vf~v~~~i~sPl~gyLadryNR~~v~~vG~~iW~~Av~~~~f-------s~------~Fwq~~l~R~~vGiGeAs~~~i  141 (493)
T KOG1330|consen   75 TVFIVVFMIASPLFGYLADRYNRKRVIAVGIFIWTLAVFASGF-------SN------HFWQVLLCRGFVGIGEASYSPI  141 (493)
T ss_pred             HHHHHHHHHHHHHHHHHHhhcCcceEEeeHHHHHHHHHHHHHH-------HH------HHHHHHHHHHHhccchhhhccc
Confidence            4556788999999999999999999998887655555444331       01      2122222222566666666655


Q ss_pred             hhhhhcccceeeecCCCchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhcC-hhHHHHHHHHHHHHHHHHHHHHHHHhh
Q 015168           83 LGVAVERDWAVLLAGINRPIALAKANAVLNRIDLLCEIAGASLFGILLSKYE-PVTCLKFAAGLIMWSLPVMIILTWFTN  161 (412)
Q Consensus        83 ~~~ai~RDwv~~l~~~~~~~~L~~~Ns~l~~id~v~~llgP~lgG~L~~~~~-~~~~~~~~~~~~~~s~~~~~~~l~~~~  161 (412)
                      .+.-| -|    .++++   +-.+.-......--+.-.+|=..|+.+-+..+ ||.+++..+...++....    ...  
T Consensus       142 a~s~I-aD----~f~~~---~Rs~~~~ify~~ipvGsglG~vvgs~va~~~~~Wr~af~~~avl~vi~~~L----~~~--  207 (493)
T KOG1330|consen  142 APSLI-AD----SFPDD---KRSRVLGIFYFAIPVGSGLGYVVGSVVASLTFWWRWAFRGSAVLGVIVGLL----VFL--  207 (493)
T ss_pred             chhHh-hh----cCcch---hhhHHHHHhhhhcccccceeEEeeeeeccCccceEEEEEeehHHHHHHHHH----HHh--
Confidence            54433 36    67654   56666666666666666777777777777655 999987655444433321    111  


Q ss_pred             hccccccccccccccccCCCCCCCCCCchhhhHHhHHHHHHhHHHHhcCCcchH-HHHHHHHHHHhh-hccchHHH-HHH
Q 015168          162 KISSGVLDRAKCSQSCCRTSNEGPVPDADNIVDVGIEAIKLGWKEYMQQPVLPA-SLAYVLLCLNVV-LTPGSLMT-AFL  238 (412)
Q Consensus       162 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~v~~~-~~~~a~l~~t~v-~~~~~~~~-~y~  238 (412)
                      -++||  +|..++  +.+.+++...+         .....+..+...++|++-. ++.+....+-+. ..+.+..+ .|.
T Consensus       208 f~~eP--~rga~~--~~~~~~~~~~~---------~ts~~kDl~~l~~~~v~v~~sl~~~a~~fv~Gs~sww~p~~~~~~  274 (493)
T KOG1330|consen  208 FVREP--ERGARD--EVDGENKMVKP---------FTSVWKDLKVLAKIKVFVLSSLGIIAAQFVIGSLSWWAPAFIYYS  274 (493)
T ss_pred             hccCc--cccccc--ccccCCcCCCC---------ccchHHHHHHHHccCceeeehHHHHHHHHhccccchhhhhHHHHH
Confidence            22331  121111  11111100001         1223345666677666655 444444333211 22222222 333


Q ss_pred             Hh-cC----CCCchhHHHhhHHHHHHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHH--HHHhc--CCCcCcchHH
Q 015168          239 TQ-RG----LNPSIIGGFSGLCASMGVAATFLSAYLVRRLGILKAGAAGLIFQASLLAMAV--AVYWS--GSLSQQNPLL  309 (412)
Q Consensus       239 ~~-~g----ls~~~~G~~~~~~avggllGt~l~~~l~~R~g~~r~~~~~~~~~~~~l~~~v--~~~~~--g~~~~~~~~~  309 (412)
                      ++ .|    .+.-..|+.-+.+++|.+.|..+..++.+++....+...+.....+.....+  ...++  ..-+......
T Consensus       275 ~~~~~~~~~~~~ifg~vt~~~G~lGvl~Ggiisd~~~~~~~~~~~~~~~q~~~~~g~~~s~~~L~~~~~~~~~s~~~~~i  354 (493)
T KOG1330|consen  275 YELIGFDHNATLIFGGVTCAGGSLGVLFGGIISDKLSRIFPNSGTLRASQLSAALGAPLSIPFLFLFPAFTSSSMIFGLI  354 (493)
T ss_pred             HHHhCCccccchhhhhHHHhhchhhheehHHHHHHHHHhcccccchhHHHHHHhhhhhHHHHHHHHHHhhhhHHHHHHHH
Confidence            43 34    4444444555666777777777777776655443333322221111111111  01111  1101112233


Q ss_pred             HHHHHHHHhhhhhhhhhhhhhHHhhccCCcccchhHHHHHHHHHHHHH
Q 015168          310 FFLCLIVLSRLGHMSYDIVGAQILQTGIPSSKANLIGTTEISVASLVE  357 (412)
Q Consensus       310 l~~~g~~~sr~GLw~~dl~~~~l~Q~~vp~~~~G~v~g~~~sl~~~~~  357 (412)
                      ++..|+..    .|.---++.-++-+.|||++|-.+.+.+..+-..++
T Consensus       355 l~~~g~~~----~~~~~a~n~~i~l~vV~p~~Rt~a~a~~~~~~h~fg  398 (493)
T KOG1330|consen  355 LFLVGETI----SWFNWATNNPIFLEVVPPSRRTTAYALDTVFEHIFG  398 (493)
T ss_pred             HHHHHHHH----HhcccccccceeeEecCcccccHHHHHHHHHHHHhc
Confidence            34444433    233334566778888999999999999998888753

>KOG0569 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]

Probab=98.74  E-value=2.3e-05  Score=81.14  Aligned_cols=319  Identities=14%  Similarity=0.100  Sum_probs=166.5

Q ss_pred             HHHhhhhhcchhccCCcHHHHHHHHHHHHHHHHHHHHHHHHHhccccccccchhHHHHHHHHHHHHHHHHHhhhhhhhhc
Q 015168            9 LIVGGPLVGKLMDHSPRIPAYICLNTVQAAAQLLSAAMIIHAHTVIPTSSSMLLHPWFFVLVLAGAVERLTGVALGVAVE   88 (412)
Q Consensus         9 ~ll~g~~~G~~vDr~~R~~v~~~~~~~q~~~v~~s~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~l~~~a~~~ai~   88 (412)
                      .++-+..+|.+.||++||..+..+.+....+    +.+........      ....+.+.=++.|...-+.+.....   
T Consensus        73 ~~~Gs~~~~~la~~~GRK~~l~~~~~l~~~~----~~~~~~s~~~~------~~e~li~GR~i~Gl~~gl~~~~~pm---  139 (485)
T KOG0569|consen   73 GMIGSFSSGLLADRFGRKNALLLSNLLAVLA----ALLMGLSKSAP------SFEMLILGRLIVGLACGLSTGLVPM---  139 (485)
T ss_pred             HHHHHHHHHHHHHhhcchHHHHHHHHHHHHH----HHHHHHHHHhh------hHHHHHHHHHHHHHHhHHHHHHHHH---
Confidence            4455667888999999998888887655443    21111111110      1112333334555555555555444   


Q ss_pred             ccceeeecCCCchhhhHHHHHHHHHH-HHHHHHHHHHHHHHHH--hhcChhHHHHHHHHHHHHHHHHHHHHHHHhhhccc
Q 015168           89 RDWAVLLAGINRPIALAKANAVLNRI-DLLCEIAGASLFGILL--SKYEPVTCLKFAAGLIMWSLPVMIILTWFTNKISS  165 (412)
Q Consensus        89 RDwv~~l~~~~~~~~L~~~Ns~l~~i-d~v~~llgP~lgG~L~--~~~~~~~~~~~~~~~~~~s~~~~~~~l~~~~~~~~  165 (412)
                        |+.++.++    ++...-+.+..+ ..++.++|-.+|--=+  +--.|+..+.+......+.+       ..+...||
T Consensus       140 --yl~E~sP~----~~RG~~g~~~~~~~~~g~ll~~~~~l~~ilGt~~~W~~l~~~~~i~~~~~l-------~~l~~~PE  206 (485)
T KOG0569|consen  140 --YLTEISPK----NLRGALGTLLQIGVVIGILLGQVLGLPSLLGTEDLWPYLLAFPLIPALLQL-------ALLPFLPE  206 (485)
T ss_pred             --HHhhcChh----hhccHHHHHHHHHHHHHHHHHHHHccHHhcCCCcchHHHHHHHHHHHHHHH-------HHHhcCCC
Confidence              66678775    355554444444 3344555533332211  12237765544333333322       22345676


Q ss_pred             ccc---c-cccccccccCCCCC--CCCCCchhhhHHhHHH---------HHHhHHHHhcCCcchHHHHHHHHHHHhhhcc
Q 015168          166 GVL---D-RAKCSQSCCRTSNE--GPVPDADNIVDVGIEA---------IKLGWKEYMQQPVLPASLAYVLLCLNVVLTP  230 (412)
Q Consensus       166 ~~l---~-~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~---------~~~g~~~~~~~~v~~~~~~~a~l~~t~v~~~  230 (412)
                      .+.   . +.++.  +.+++-+  ....|.++......++         -...++.++++|..|-.+........ ...+
T Consensus       207 SPk~Ll~~k~~~~--~A~~sl~~y~G~~~~~~~~e~~~~e~~~~~~~~~~~~sl~~~~~~~~lR~~~~i~~~v~~-~qq~  283 (485)
T KOG0569|consen  207 SPKYLLIKKGDEE--EARKALKFYRGKEDVEAEIEEMLREIEEEELEKKKQISLRQLLKNPTLRRPLLIGIVVSF-AQQF  283 (485)
T ss_pred             CcchHHHHcCCHH--HHHHHHHHHhCCCcchhHHHHHHHHHHHhccccccCCcHHHHhcCcchhHHHHHHHHHHH-HHHh
Confidence            320   1 11111  0000000  0000000000000111         12258889999999986544433321 1233


Q ss_pred             chH--HHHH----HHhcCCCCchhHHHhhHHHHHHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHH-HhcCCCc
Q 015168          231 GSL--MTAF----LTQRGLNPSIIGGFSGLCASMGVAATFLSAYLVRRLGILKAGAAGLIFQASLLAMAVAV-YWSGSLS  303 (412)
Q Consensus       231 ~~~--~~~y----~~~~gls~~~~G~~~~~~avggllGt~l~~~l~~R~g~~r~~~~~~~~~~~~l~~~v~~-~~~g~~~  303 (412)
                      +++  ...|    .++-|+++..--+.-...++.-+..|++.+++.+|+|+++..+.+......+.+..... .......
T Consensus       284 sGi~ai~~Yst~i~~~aG~~~~~a~~an~~~g~v~~~~t~~~~~lid~~gRRpLll~~~~~~~~~~~~~~~~~~l~~~~~  363 (485)
T KOG0569|consen  284 SGINAIFFYSTSIFKTAGFTPEEAQYANLGIGIVNLLSTLVSPFLIDRLGRRPLLLISLSLMAVALLLMSIALFLSNSFG  363 (485)
T ss_pred             cCcceeHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence            331  2223    34679999988888888888999999999999999999988888877655554444332 2211110


Q ss_pred             CcchHHHHHHH----HHHhhhhhhhhhhhhhHHhhccCCcccchhHHHHHHHHHHHHHHHH
Q 015168          304 QQNPLLFFLCL----IVLSRLGHMSYDIVGAQILQTGIPSSKANLIGTTEISVASLVESVM  360 (412)
Q Consensus       304 ~~~~~~l~~~g----~~~sr~GLw~~dl~~~~l~Q~~vp~~~~G~v~g~~~sl~~~~~ll~  360 (412)
                      ++.. +....+    ++.-.+|+   ...---+..|.+|++.|..+.++..+.|+....+.
T Consensus       364 ~~~~-y~~i~~~~~~~~~f~~G~---gpi~~fi~aELf~~~~R~aa~s~~~~~~w~~~fiv  420 (485)
T KOG0569|consen  364 SWLS-YLCIAAIFLFIISFAIGP---GPIPWFIGAELFPQSARSAAQSVATAVNWLSNFIV  420 (485)
T ss_pred             hHHH-HHHHHHHHHHHHhhhcCC---CchhHHHHHHhCCccchHHHHHHHHHHHHHHHHHH
Confidence            1111 111111    11112232   22334567899999999999999999999865443

>KOG2532 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]

Probab=98.73  E-value=1.1e-05  Score=83.65  Aligned_cols=351  Identities=13%  Similarity=0.057  Sum_probs=196.7

Q ss_pred             HHHHhhhhhcchhccCCcHHHHHHHHHHHHHHHHHHHHHHHHHhccccccccchhHHHHHHHHHHHHHHHHHhhhhhhhh
Q 015168            8 ILIVGGPLVGKLMDHSPRIPAYICLNTVQAAAQLLSAAMIIHAHTVIPTSSSMLLHPWFFVLVLAGAVERLTGVALGVAV   87 (412)
Q Consensus         8 p~ll~g~~~G~~vDr~~R~~v~~~~~~~q~~~v~~s~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~l~~~a~~~ai   87 (412)
                      -+++--.+.|.++||++-|++...+.+.-.++-++ . +++.-..        . +.++++=++-|..+...-.+... +
T Consensus        85 G~i~~~iP~g~l~~k~G~r~v~~~~~~~sa~~t~l-~-P~aa~~~--------~-~~~~~~R~lqGl~~g~~~pa~~~-i  152 (466)
T KOG2532|consen   85 GYILGQIPGGYLADKFGARRVFFISGLISALLTLL-T-PLAASIG--------F-YLLLVLRFLQGLGQGVLFPAIGS-I  152 (466)
T ss_pred             HHHHHHcCcHHHHHHcCchHHHHHHHHHHHHHHHH-H-HHHHHhc--------c-hhhHHHHHHhHHHHhHHHhhhhc-e
Confidence            34555667899999999999988886655443221 1 1111111        1 23333334555444433334333 3


Q ss_pred             cccceeeecCCCchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhh-cChhHHHHHHHHHHHHHHHHHHHHHHHhhhcccc
Q 015168           88 ERDWAVLLAGINRPIALAKANAVLNRIDLLCEIAGASLFGILLSK-YEPVTCLKFAAGLIMWSLPVMIILTWFTNKISSG  166 (412)
Q Consensus        88 ~RDwv~~l~~~~~~~~L~~~Ns~l~~id~v~~llgP~lgG~L~~~-~~~~~~~~~~~~~~~~s~~~~~~~l~~~~~~~~~  166 (412)
                      ...|.|.-       |-.+.-+.+..-.|.+++++=+++|.|.+. +||+..|.+.+....+-..+.+   ..++.-|+ 
T Consensus       153 ~~~W~P~~-------Ers~~~ail~~g~q~g~v~~mp~sg~lc~s~~GW~sifY~~g~~g~i~~~~w~---~~~~d~P~-  221 (466)
T KOG2532|consen  153 LAKWAPPN-------ERSTFIAILTAGSQLGTIITMPVSGLLCESSLGWPSIFYVFGIVGLIWFILWF---LFYSDSPS-  221 (466)
T ss_pred             eeeECCHH-------HHHHHHHHHHHHHHHHHHHHHHhHHHHhccCCCCchHHHHHHHHHHHHHHHHH---HHhcCCcc-
Confidence            33475433       678888888899999999999999999998 9999999875554444332211   11122222 


Q ss_pred             ccccccccccccCCC-CCCCCCCchhhhHHhHHHHHHhHHHHhcCCcchHHHHHHHHHHHhhhccchHHHHHHHh-cCCC
Q 015168          167 VLDRAKCSQSCCRTS-NEGPVPDADNIVDVGIEAIKLGWKEYMQQPVLPASLAYVLLCLNVVLTPGSLMTAFLTQ-RGLN  244 (412)
Q Consensus       167 ~l~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~v~~~~~~~a~l~~t~v~~~~~~~~~y~~~-~gls  244 (412)
                         +.+...+++++. +++...++.+   .   ...--|+..+++|.+++..............+..-.+.|+++ +|++
T Consensus       222 ---~h~~is~~El~~I~~~k~~~~~~---~---~~~vP~~~i~ts~~vwai~~~~f~~~~~~~~l~~y~PtY~~~VL~f~  292 (466)
T KOG2532|consen  222 ---KHPNISEKELKYIEKGKSEAHVK---K---KPPVPYKAILTSPPVWAIWISAFGGNWGFYLLLTYLPTYLKEVLGFD  292 (466)
T ss_pred             ---cCCCCCHHHHHHHHhcccccccC---C---CCCCCHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhCCC
Confidence               111100000000 0000000000   0   011258889999999995554333311012223347778876 8999


Q ss_pred             CchhHHHhhHHHHHHHHHHHHHHHHHHHhch-------hhHHHHHHHHHHHHHHHHHHHHhcCCCcCcchHHHHHHHHHH
Q 015168          245 PSIIGGFSGLCASMGVAATFLSAYLVRRLGI-------LKAGAAGLIFQASLLAMAVAVYWSGSLSQQNPLLFFLCLIVL  317 (412)
Q Consensus       245 ~~~~G~~~~~~avggllGt~l~~~l~~R~g~-------~r~~~~~~~~~~~~l~~~v~~~~~g~~~~~~~~~l~~~g~~~  317 (412)
                      -..-|++-++--+....-.++++.+..|+-.       +|...-.+.. ....+..+...+.+.......+.++..++..
T Consensus       293 v~~~G~~salP~l~~~~~k~~~g~lsD~l~~~~ls~t~~rkifn~i~~-~~~ai~l~~l~~~~~~~~~~a~~~l~~~~~~  371 (466)
T KOG2532|consen  293 VRETGFLSALPFLAMAIVKFVAGQLSDRLTFRILSETTVRKIFNTIAF-GGPAVFLLVLAFTSDEHRLLAVILLTIAIGL  371 (466)
T ss_pred             hhhhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCchHhHHHHHHhHHH-HHHHHHHHeeeecCCCcchHHHHHHHHHHHH
Confidence            9999999988888888777777777666544       2222212111 1111111111122221112234444333333


Q ss_pred             hhhhhhhhhhhhhHHhhccCCcccchhHHHHHHHHHHHHHHHHHHHHHhccC---CCchhHHHHHHHHHHHHHHHHHHHH
Q 015168          318 SRLGHMSYDIVGAQILQTGIPSSKANLIGTTEISVASLVESVMLGVAIIAND---VSHFGFLATLSLLSVVGAAWMFCHW  394 (412)
Q Consensus       318 sr~GLw~~dl~~~~l~Q~~vp~~~~G~v~g~~~sl~~~~~ll~~~~~~~~~~---~~~f~~l~~~s~~~v~~~~~~~~~~  394 (412)
                      ++...-.+..+.   ..  .-|+..|.+.|+.+.......++.+.++...-.   .++....-++..+....+...|..+
T Consensus       372 ~g~~~~Gf~~~~---~~--~apq~a~~l~g~~~~~~~~~~~~~P~~vg~~~~~~t~~eW~~VF~i~a~i~~~~~i~f~~f  446 (466)
T KOG2532|consen  372 SGFNISGFYKNH---QD--IAPQHAGFVMGIINFVGALAGFIAPLLVGIIVTDNTREEWRIVFLIAAGILIVGNIIFLFF  446 (466)
T ss_pred             cccchhhhHhhh---hh--ccchHHHHHHHHHHHHHHHHHHHHHHheeeEeCCCCHHHHHHHHHHHHHHHHHhchheeEe
Confidence            332221111111   11  167889999999999999999888888766653   4578888888888888888888888


Q ss_pred             hc
Q 015168          395 LL  396 (412)
Q Consensus       395 ~~  396 (412)
                      ..
T Consensus       447 ~s  448 (466)
T KOG2532|consen  447 GS  448 (466)
T ss_pred             ec
Confidence            54

>KOG3764 consensus Vesicular amine transporter [Intracellular trafficking, secretion, and vesicular transport]

Probab=98.63  E-value=8.8e-07  Score=88.08  Aligned_cols=311  Identities=13%  Similarity=0.009  Sum_probs=181.3

Q ss_pred             HHHHHhhhhhcchhccCCcHHHHHHHHHHHHHHHHHHHHHHHHHhccccccccchhHHHHHHHHHHHHHHHHHhhhhhhh
Q 015168            7 LILIVGGPLVGKLMDHSPRIPAYICLNTVQAAAQLLSAAMIIHAHTVIPTSSSMLLHPWFFVLVLAGAVERLTGVALGVA   86 (412)
Q Consensus         7 lp~ll~g~~~G~~vDr~~R~~v~~~~~~~q~~~v~~s~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~l~~~a~~~a   86 (412)
                      +-.++.+|+.|.++||..++--|++..++-    ..|++  ++.+..       ..+.++++=.+=|.-+..++++- .+
T Consensus       117 ~~qllvnp~~G~l~~~iGy~ipm~~Gl~vm----f~sTi--lFafg~-------sy~~l~vAR~LQgvgsA~~~tsg-la  182 (464)
T KOG3764|consen  117 LVQLLVNPFFGNLIDRIGYKIPMVAGLFVM----FLSTI--LFAFGN-------SYPMLFVARSLQGVGSAFADTSG-LA  182 (464)
T ss_pred             HHHHHhcccchhhHHHhccccHHHHHHHHH----HHHHH--HHHHcc-------hhHHHHHHHHHhhhhHHHHHhhh-HH
Confidence            567899999999999999988887776533    33343  333332       11334554445555555555543 33


Q ss_pred             hcccceeeecCCCchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhcChhHHHHHHHHHHHHHHHHHHHHHHHhhhcccc
Q 015168           87 VERDWAVLLAGINRPIALAKANAVLNRIDLLCEIAGASLFGILLSKYEPVTCLKFAAGLIMWSLPVMIILTWFTNKISSG  166 (412)
Q Consensus        87 i~RDwv~~l~~~~~~~~L~~~Ns~l~~id~v~~llgP~lgG~L~~~~~~~~~~~~~~~~~~~s~~~~~~~l~~~~~~~~~  166 (412)
                      +.-|    .+++| . +..++......--....++||..||.+.++.|-..-|.+.+....+..+..++   .   +++ 
T Consensus       183 mlAd----~f~~d-~-er~~vmGialgfislG~lvgPpfGGilYe~~Gk~aPFlVL~~v~Lld~~L~l~---v---i~p-  249 (464)
T KOG3764|consen  183 MLAD----VFPED-N-ERGSVMGIALGFISLGVLVGPPFGGILYEFAGKSAPFLVLAIVLLLDGALQLL---V---IEP-  249 (464)
T ss_pred             HHHH----Hcccc-h-hhhHHHHHHHHHHhccceecCCcccchHhhcCCcCcHHHHHHHHHHHHHHHHh---e---eCc-
Confidence            4345    66654 2 56788888888888899999999999999999998887655444443322111   1   111 


Q ss_pred             ccccccccccccCCCCCCCCCCchhhhHHhHHHHHHhHHHHhcCC-cchHHHHHHHHHHHhhhccchHHHHHHH-hcCCC
Q 015168          167 VLDRAKCSQSCCRTSNEGPVPDADNIVDVGIEAIKLGWKEYMQQP-VLPASLAYVLLCLNVVLTPGSLMTAFLT-QRGLN  244 (412)
Q Consensus       167 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~-v~~~~~~~a~l~~t~v~~~~~~~~~y~~-~~gls  244 (412)
                        .+.++.      +++++                ..+..++++| +.....+.....+. ....+.....+.. +..-+
T Consensus       250 --~~~~~~------~~~~~----------------~~~~~Ll~dP~I~~~agai~~~n~~-lafLePtlslwm~e~m~~p  304 (464)
T KOG3764|consen  250 --TEMDPD------STEQG----------------TPMWSLLMDPYILLIAGAITFSNSS-LAFLEPTLSLWMLETMFTP  304 (464)
T ss_pred             --cccCcc------ccccC----------------ccHHHHHhCchHhhhhcchhhccch-HHHhCcccHHHHHHhccCC
Confidence              111110      00000                1233345555 33333333333332 2334555666665 46745


Q ss_pred             CchhHHHhhHHHHHHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHH-H--HHHHhcCCCcCcchHHHHHHHHHHhhhh
Q 015168          245 PSIIGGFSGLCASMGVAATFLSAYLVRRLGILKAGAAGLIFQASLLAM-A--VAVYWSGSLSQQNPLLFFLCLIVLSRLG  321 (412)
Q Consensus       245 ~~~~G~~~~~~avggllGt~l~~~l~~R~g~~r~~~~~~~~~~~~l~~-~--v~~~~~g~~~~~~~~~l~~~g~~~sr~G  321 (412)
                      .-.+|+.+--.++...+|+-+++.+.+|++..|-..   .++.+.... +  ..++..+    +..+++-..|+   ++|
T Consensus       305 ~w~~G~~fLp~~~~y~ig~~lfg~la~k~~~~~wl~---~~~gl~~~G~~~~~iP~~~~----~~~L~vp~~~l---~~~  374 (464)
T KOG3764|consen  305 GWEVGLAFLPASLSYAIGTNLFGKLADKYPHLRWLL---SLGGLATVGVSSGPIPFATS----IAQLWVPNFGL---GFG  374 (464)
T ss_pred             CcceeeeecccccchhccCchHHHHHHhcCchhHHH---HHHHHHHHHHHhchhHhhhh----HHHHhhhhHHH---HHH
Confidence            549999999999999999999999999999766332   111111111 0  0011111    12222222222   223


Q ss_pred             hhhhhhhhhHHhhccCCccc------chhHHHHHHHHHHHHHHHHHHHHHhccCCCchhHHHHH
Q 015168          322 HMSYDIVGAQILQTGIPSSK------ANLIGTTEISVASLVESVMLGVAIIANDVSHFGFLATL  379 (412)
Q Consensus       322 Lw~~dl~~~~l~Q~~vp~~~------~G~v~g~~~sl~~~~~ll~~~~~~~~~~~~~f~~l~~~  379 (412)
                      .-+.|-+..-.+|..+++++      -|.|.+++...-.....+.+..+......-.|.++..+
T Consensus       375 i~~~dasl~P~l~~lvd~rh~s~~~vYGsVyaIad~a~sla~a~GP~~gg~iv~~iGF~wl~~i  438 (464)
T KOG3764|consen  375 IGLADASLIPTLGYLVDPRHVSGFNVYGSVYAIADAAFSLAYAIGPTFGGSLVEAIGFEWLMTI  438 (464)
T ss_pred             HHHHHHHHhhhhHHhcchhhccccceeeeHHHHHHHHHHHhhhccccccchheeehhHHHHHHH
Confidence            33578888888888876643      46777776665555555555666666666677776655

>TIGR01301 GPH_sucrose GPH family sucrose/H+ symporter

Probab=98.57  E-value=0.0003  Score=73.23  Aligned_cols=116  Identities=17%  Similarity=0.098  Sum_probs=61.3

Q ss_pred             hHHHHHHhhhhhcchhc----cCCcHHHHHHHHHHHHHHHHHHHHHHHHHhcc-----ccccccchhHH-H-HHHHH-HH
Q 015168            5 SKLILIVGGPLVGKLMD----HSPRIPAYICLNTVQAAAQLLSAAMIIHAHTV-----IPTSSSMLLHP-W-FFVLV-LA   72 (412)
Q Consensus         5 ~~lp~ll~g~~~G~~vD----r~~R~~v~~~~~~~q~~~v~~s~~~~~~~~~~-----~~~~~~~~~~~-l-~~~~~-~~   72 (412)
                      ..+-.++..|.+|.+.|    |++|||..+..-..-   .+++...+.+....     ...++....+. + +++.+ +.
T Consensus        48 ~~l~~~i~~Pi~G~lSDr~~sr~GRRrp~il~g~~~---~~~~l~ll~~~~~~~~~~~~~~~~~~~~~~i~~~~i~~~ll  124 (477)
T TIGR01301        48 GPLSGLLVQPLVGYLSDRCTSRFGRRRPFIAAGAAL---VAFAVILIGFAADIGHLFGDNLDKKTKPRAIIVFVVGFWIL  124 (477)
T ss_pred             HHHHHHHHHhHeeehhcCCCCCCCChHHHHHHHHHH---HHHHHHHHHhCchhhhhccccccccchhHHHHHHHHHHHHH
Confidence            45667788999999999    499999866542211   11111111111110     00000001111 1 11111 22


Q ss_pred             HHHHHHHhhhhhhhhcccceeeecCCCchhhhHHHHHHHHHHHHHHHHHHHHHHHHH
Q 015168           73 GAVERLTGVALGVAVERDWAVLLAGINRPIALAKANAVLNRIDLLCEIAGASLFGIL  129 (412)
Q Consensus        73 g~~~~l~~~a~~~ai~RDwv~~l~~~~~~~~L~~~Ns~l~~id~v~~llgP~lgG~L  129 (412)
                      ....+....+. +|+    ++.+++++ +++...+|+.......++.++|+.+||.+
T Consensus       125 d~~~n~~~~p~-rAL----iaDl~p~~-~~~~~~a~~~~~~~~~lG~ilg~~~g~~~  175 (477)
T TIGR01301       125 DVANNMLQGPC-RAF----LADLTGGD-ARRTRIANAYFSFFMAIGNVLGYAAGAYS  175 (477)
T ss_pred             HHHHHHHHHHH-HHh----cccccCch-hHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            22233333222 333    44488764 21356899999999999999999999976

This model represents sucrose/proton symporters, found in plants, from the Glycoside-Pentoside-Hexuronide (GPH)/cation symporter family. These proteins are predicted to have 12 transmembrane domains. Members may export sucrose (e.g. SUT1, SUT4) from green parts to the phloem for long-distance transport or import sucrose (e.g SUT2) to sucrose sinks such as the tap root of the carrot.

>PF01306 LacY_symp: LacY proton/sugar symporter; InterPro: IPR022814 In bacteria there are a number of families of transport proteins, including symporters and antiporters, that mediate the intake of a variety of sugars with the concomitant uptake of hydrogen ions (proton symporters) []

Probab=98.56  E-value=2.7e-05  Score=79.15  Aligned_cols=264  Identities=10%  Similarity=0.066  Sum_probs=136.7

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHhhcChhHHHHHHHHHHHHHHHHHHHHHHHhhhccccccccccccccccCCCCCCCCCC
Q 015168          109 AVLNRIDLLCEIAGASLFGILLSKYEPVTCLKFAAGLIMWSLPVMIILTWFTNKISSGVLDRAKCSQSCCRTSNEGPVPD  188 (412)
Q Consensus       109 s~l~~id~v~~llgP~lgG~L~~~~~~~~~~~~~~~~~~~s~~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~  188 (412)
                      .+.|.=-+++-.++..++|.++. .++...+|.......+..    + +....|.++  .++.+.  ++.++    .+++
T Consensus       141 G~~R~wGSig~ai~s~~~G~L~~-i~p~~~fwi~s~~~~il~----l-ll~~~~~~~--~~~~~~--~~~~~----~~~~  206 (412)
T PF01306_consen  141 GRARMWGSIGFAIASLLAGILFN-INPNIIFWIASAAAIILL----L-LLLLLKPDV--PPQAEV--ADALG----AKKD  206 (412)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHH----H-HHHSS---S--SSSS-S--STTSS----S---
T ss_pred             chHHHHhhHHHHHHHHHhheeee-eCccHHHHHHHHHHHHHH----H-HHHHcCCcC--chhhhh--hcccc----cCCC
Confidence            56777788889999999999998 466666664332222221    1 111111110  000000  00000    0000


Q ss_pred             chhhhHHhHHHHHHhHHHHhcCCcchHHHHHHHHHHHhhhccchHHHHHHH----hcCCCCchhHHHhhHHHHHHHHHHH
Q 015168          189 ADNIVDVGIEAIKLGWKEYMQQPVLPASLAYVLLCLNVVLTPGSLMTAFLT----QRGLNPSIIGGFSGLCASMGVAATF  264 (412)
Q Consensus       189 ~~~~~~~~~~~~~~g~~~~~~~~v~~~~~~~a~l~~t~v~~~~~~~~~y~~----~~gls~~~~G~~~~~~avggllGt~  264 (412)
                           +  . . .+.....+|+|.++.-..+-..-.+....+|.+...|.+    +.+.+.+.+|.+-+.+.+.....=.
T Consensus       207 -----~--~-~-~~~~~~l~k~~~fw~~~l~v~g~~~~Y~vfdqqf~~y~~~~f~~~~~g~~~~G~l~s~~v~~E~~~m~  277 (412)
T PF01306_consen  207 -----K--V-S-LKDVLSLFKMRNFWFFVLFVIGVAAIYDVFDQQFPIYFASFFQSAGQGNQMYGYLWSVQVFLEALMMF  277 (412)
T ss_dssp             ------------HHHHHHHTTSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSSSHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             -----C--C-c-HHHHHHHhcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccChhHHhHHHHHHHHHHHHHHH
Confidence                 0  0 0 234667889998887333211111112446777777765    3567778999999999999999999


Q ss_pred             HHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHHhcCCCcCcchHHHHHHHHHHhhhhhhhhhhhhhHHhhccCCcccchh
Q 015168          265 LSAYLVRRLGILKAGAAGLIFQASLLAMAVAVYWSGSLSQQNPLLFFLCLIVLSRLGHMSYDIVGAQILQTGIPSSKANL  344 (412)
Q Consensus       265 l~~~l~~R~g~~r~~~~~~~~~~~~l~~~v~~~~~g~~~~~~~~~l~~~g~~~sr~GLw~~dl~~~~l~Q~~vp~~~~G~  344 (412)
                      +.|++.+|+|.++.++++.....  .=.....+.+++     ..+...=-+-.-.+++  .-++..++.++..|++...+
T Consensus       278 ~~p~li~rig~k~~Lllag~i~~--iRi~~~~~~~~~-----~~i~~~klLH~~e~~l--~lva~fkYI~~~fd~rlsAt  348 (412)
T PF01306_consen  278 FSPWLINRIGAKNLLLLAGVIMA--IRIIGSGFATNP-----WVISLIKLLHALEFPL--LLVAAFKYITAHFDKRLSAT  348 (412)
T ss_dssp             HHHHHHHHH-HHHHHHHHHHHHH--HHHHHHHT--SH-----HHHHHHHHHHHHHHHH--HHHHHHHHHHHHS-GGGHHH
T ss_pred             HHHHHHHhcChHhHHHHHHHHHH--HHHHHHhhhcch-----HHHHHHHHHHHHHHHH--HHHHHHHHHHHhCCHhHHHH
Confidence            99999999999999887754311  111111222211     1111111111223344  55788888899888887666


Q ss_pred             HHHHHHHHHHH-HHHHHHHHHHhccCCCchh-HHHHHHHHHHHHHHHHHHHHhcCCCccCCccccc
Q 015168          345 IGTTEISVASL-VESVMLGVAIIANDVSHFG-FLATLSLLSVVGAAWMFCHWLLNPTDEQRSLFSF  408 (412)
Q Consensus       345 v~g~~~sl~~~-~~ll~~~~~~~~~~~~~f~-~l~~~s~~~v~~~~~~~~~~~~~~~~~~~~~~~~  408 (412)
                      +..+...+... ...+.....+...|.--|. .-.+++.  +.....++..+.-|  +++++.+|.
T Consensus       349 ~y~v~~~~~~~~~~~i~s~~~G~lyd~~G~~~tylimg~--iv~~~~li~~f~l~--~~~~~~~~~  410 (412)
T PF01306_consen  349 LYLVGFQFAKQIGIIILSPLAGYLYDRIGFQHTYLIMGL--IVLPFTLISAFTLK--KDKKQIVHP  410 (412)
T ss_dssp             HHHHHHTTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HHHHHHHHHHHHS----SSSTTCCC
T ss_pred             HHHHHHHHHHHHHHHHHhhhHHhhHhhcCcHHHHHHHHH--HHHHHHHHheeeec--CCCcccccC
Confidence            66554322222 2222233334444443332 3333332  34444555555444  335777775

The lacY family of Escherichia coli and Klebsiella pneumoniae are proton/beta-galactoside symporters, which, like most sugar transporters, are integral membrane proteins with 12 predicted transmembrane (TM) regions. Also similar to the lacY family are the rafinose (rafB) and sucrose (cscB) permeases from E. coli []. This entry also includes bacterial phenylproprionate permease.; PDB: 1PV7_B 1PV6_A 2Y5Y_B 2CFQ_A 2V8N_B 2CFP_A.

>COG2223 NarK Nitrate/nitrite transporter [Inorganic ion transport and metabolism]

Probab=98.54  E-value=7.2e-05  Score=75.19  Aligned_cols=331  Identities=15%  Similarity=0.045  Sum_probs=176.6

Q ss_pred             HhhhhhcchhccCCcHHHHHHHHHHHHHHHHHHHHHHHHHhccccccccchhHHHHHHHHHHHHHHHHHhhhhhhhhccc
Q 015168           11 VGGPLVGKLMDHSPRIPAYICLNTVQAAAQLLSAAMIIHAHTVIPTSSSMLLHPWFFVLVLAGAVERLTGVALGVAVERD   90 (412)
Q Consensus        11 l~g~~~G~~vDr~~R~~v~~~~~~~q~~~v~~s~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~l~~~a~~~ai~RD   90 (412)
                      ++=.+-|-+.||++-|++...+.++-    +  .+.+...+.....    .++.+++..+++|...--|.+....     
T Consensus        64 llRl~~g~l~drfGgR~~~~~s~~l~----~--IP~~~~~~a~~~~----~~~~ll~~gll~G~~GasFav~m~~-----  128 (417)
T COG2223          64 LLRLPYGFLTDRFGGRKWTILSMLLL----L--IPCLGLAFAVTYP----STWQLLVIGLLLGLAGASFAVGMPN-----  128 (417)
T ss_pred             HHHHHHHhhhcccCchHHHHHHHHHH----H--HHHHHHHHHccCC----chHHHHHHHHHHhcccceehccccc-----
Confidence            44567899999998888765553311    1  1211222222211    1256777788899888777776543     


Q ss_pred             ceeeecCCCchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhcChhHHHHHHHHHHHHHHHHHHHHHHHh-hhccccccc
Q 015168           91 WAVLLAGINRPIALAKANAVLNRIDLLCEIAGASLFGILLSKYEPVTCLKFAAGLIMWSLPVMIILTWFT-NKISSGVLD  169 (412)
Q Consensus        91 wv~~l~~~~~~~~L~~~Ns~l~~id~v~~llgP~lgG~L~~~~~~~~~~~~~~~~~~~s~~~~~~~l~~~-~~~~~~~l~  169 (412)
                       +..-++++++......|+.=+.--.++++++|.+....-.. .|+.+..+-...-++    ..+..+.. +..||.   
T Consensus       129 -~s~~fP~~~qG~AlGI~g~GN~G~av~q~~~P~v~~~~g~~-~w~~~~~i~~~~l~v----~~v~~~~~~~d~p~~---  199 (417)
T COG2223         129 -ASFFFPKEKQGLALGIAGAGNLGVAVAQLVAPLVAVAFGFL-AWRNVAGIYVVALAI----AAVLAWLGMNDVPEH---  199 (417)
T ss_pred             -ccccCChhhhhHHHHHhccccccHHHHHHHHHHHHHHHhhH-HHHHHHHHHHHHHHH----HHHHHHHHhCCChhh---
Confidence             22246655443556667633444567789999987654321 266654432222222    12222222 233321   


Q ss_pred             cccccccccCCCCCCCCCCchhhhHHhHHHHH-HhHHHHhcCCcchH-HHHHHHHHHHhhhccchHHHHHHH-hcCCCCc
Q 015168          170 RAKCSQSCCRTSNEGPVPDADNIVDVGIEAIK-LGWKEYMQQPVLPA-SLAYVLLCLNVVLTPGSLMTAFLT-QRGLNPS  246 (412)
Q Consensus       170 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~~~~~~~~v~~~-~~~~a~l~~t~v~~~~~~~~~y~~-~~gls~~  246 (412)
                      |++..                        +.. +-++..++||..+- ++.+...|=. --++.....-|++ +.|+++.
T Consensus       200 r~~~~------------------------~~~~~~~~~v~~~~~~W~lsllY~~tFG~-Fvgfs~~l~~~~~~~fg~~~~  254 (417)
T COG2223         200 RASVK------------------------PQLPAQLKAVFSNKDTWLLSLLYFATFGG-FVGFSAYLPMYLVTQFGLSPV  254 (417)
T ss_pred             hcccc------------------------ccchhHHHHHhcCcchHHHHHHHHHHHHH-HHHHHHHHHHHHHHhcCCChh
Confidence            11110                        001 34555676665554 3333333311 1234455666665 6899999


Q ss_pred             hhHHHhhHHHHHHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHHhc-CC---CcCcchHHHHHHHHHHhhhhh
Q 015168          247 IIGGFSGLCASMGVAATFLSAYLVRRLGILKAGAAGLIFQASLLAMAVAVYWS-GS---LSQQNPLLFFLCLIVLSRLGH  322 (412)
Q Consensus       247 ~~G~~~~~~avggllGt~l~~~l~~R~g~~r~~~~~~~~~~~~l~~~v~~~~~-g~---~~~~~~~~l~~~g~~~sr~GL  322 (412)
                      .-|..-..+..-+.+.=-+.+++..|+|-.|..++......++  ..+....+ +.   ++.......++.-.+  ..|+
T Consensus       255 ~Ag~~a~~f~~~g~l~Rp~GG~LsDR~Gg~rv~~~~f~~~~~~--~~~l~~~~~~~~~~~~~~~~~~~~l~l~~--~~G~  330 (417)
T COG2223         255 TAGLIAFLFPLIGALARPLGGWLSDRIGGRRVTLAVFVGMALA--AALLSLFLTGFGHGGSFVVFVAVFLALFV--FAGL  330 (417)
T ss_pred             hHHHHHHHHHHHHHHHHhccchhhhhccchhHHHHHHHHHHHH--HHHHHccccccccCcchHHHHHHHHHHHH--Hhcc
Confidence            9998777777777777788899999999999988765532222  21122221 00   111111111111111  1122


Q ss_pred             hhhhhhhhHHhhccCCcccchhHHHHHHHHHHHHHHHH-HHHH-HhccCCCchhHHHHHHHHHHHHHHHHHHHHhcC
Q 015168          323 MSYDIVGAQILQTGIPSSKANLIGTTEISVASLVESVM-LGVA-IIANDVSHFGFLATLSLLSVVGAAWMFCHWLLN  397 (412)
Q Consensus       323 w~~dl~~~~l~Q~~vp~~~~G~v~g~~~sl~~~~~ll~-~~~~-~~~~~~~~f~~l~~~s~~~v~~~~~~~~~~~~~  397 (412)
                         .+..+.-+-+.+.+++.|.|+|..++.-..-+... ...+ ...+.++.....++.....+.+..+++..|.|+
T Consensus       331 ---GnGsvfk~Ip~if~~~~G~v~G~vga~G~lGGf~lp~~~g~~~~~tg~~~~~f~~~~~~~~~a~v~~~~~y~r~  404 (417)
T COG2223         331 ---GNGSVFKMIPVIFPKETGAVTGIVGAIGGLGGFFLPLAFGVSLDLTGSYTGAFMLLLAFYLVALVLTWALYARR  404 (417)
T ss_pred             ---CcchheeechHHHHhhhhHHHHHHHHhccccccchhHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence               12222222233466799999999988877532222 2222 333444566666666766677777777777555

>KOG2816 consensus Predicted transporter ADD1 (major facilitator superfamily) [General function prediction only]

Probab=98.53  E-value=2.3e-05  Score=81.09  Aligned_cols=307  Identities=16%  Similarity=0.158  Sum_probs=165.7

Q ss_pred             HHHHHHhhhhhcchhccCCcHHHHHHHHHHHHHHHHHHHHHHHHHhccccccccchhHHHHHH-HHHHHHHHHHHhhhhh
Q 015168            6 KLILIVGGPLVGKLMDHSPRIPAYICLNTVQAAAQLLSAAMIIHAHTVIPTSSSMLLHPWFFV-LVLAGAVERLTGVALG   84 (412)
Q Consensus         6 ~lp~ll~g~~~G~~vDr~~R~~v~~~~~~~q~~~v~~s~~~~~~~~~~~~~~~~~~~~~l~~~-~~~~g~~~~l~~~a~~   84 (412)
                      .++.++-.+..|.|.||+.||..+....+....-      .+...+..          .|++. .-+.|.....++..  
T Consensus        72 ~~~~~i~s~~iG~lSD~~grk~~L~~~~~~~~l~------~~~~~~~~----------~~~~~~~~l~g~~~~~~s~~--  133 (463)
T KOG2816|consen   72 GLLTLISSPLIGALSDRYGRKVVLLLPLFGTILP------ALCLLFQG----------YWFFLLLGLSGGFSAIFSVG--  133 (463)
T ss_pred             HHHHHHHHhhhHHhhhhhhhhhhHHHHHHHHHHh------HHHHHHHH----------HHHhhhcccccchhhhhhhh--
Confidence            5677888999999999999999877664422111      11111111          12221 11233333333332  


Q ss_pred             hhhcccceeeecCCCchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhcChhHHHHHHHHHHHHHHHHHHHHHHHhhhcc
Q 015168           85 VAVERDWAVLLAGINRPIALAKANAVLNRIDLLCEIAGASLFGILLSKYEPVTCLKFAAGLIMWSLPVMIILTWFTNKIS  164 (412)
Q Consensus        85 ~ai~RDwv~~l~~~~~~~~L~~~Ns~l~~id~v~~llgP~lgG~L~~~~~~~~~~~~~~~~~~~s~~~~~~~l~~~~~~~  164 (412)
                      -+..-|    ++.++   +....-..+...-..+-.++|.++|.+....|....+.+.......+.      ......+|
T Consensus       134 ~a~vad----is~~~---~R~~~~gll~~~~~~~~~~~p~~~~~~~~~~~~a~~f~ia~~~~~~~~------~y~~~~l~  200 (463)
T KOG2816|consen  134 FAYVAD----ISSEE---ERSSSIGLLSGTFGAGLVIGPALGGYLVKFLGIALVFLIAAASGILSL------LYMLLFLP  200 (463)
T ss_pred             hhheee----ccchh---HHHHHHHHHHHHHHHHHhHHHHHHHHHHHhcCchHHHHHHHHHHHHHH------HHHhhccc
Confidence            222334    55542   456666666666777889999999999999887666554333333333      22223455


Q ss_pred             ccccccccccccccCCCCCCCCCCchhhhHHhHHHHHHhHHHHh---cCCcchHHH-HHHHHHHHhhhccchHHHHHHHh
Q 015168          165 SGVLDRAKCSQSCCRTSNEGPVPDADNIVDVGIEAIKLGWKEYM---QQPVLPASL-AYVLLCLNVVLTPGSLMTAFLTQ  240 (412)
Q Consensus       165 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~---~~~v~~~~~-~~a~l~~t~v~~~~~~~~~y~~~  240 (412)
                      |. ++.+++.+.++++.+. ..        ....+..+-++.+.   .+|..+... ..-+++.....+.....+.|++.
T Consensus       201 Es-l~~~~~~~~~~~~~~~-~~--------~~~~~~~~~~~~~~~~~~~r~~l~l~l~~~~~~~~~~~~~~~~~~~yl~~  270 (463)
T KOG2816|consen  201 ES-LQEKERSDATLRELTP-GS--------LDSSHVADAFQSLTKVGPDRLLLLLLLVAFLSSLPEAGGASDVLLLYLKA  270 (463)
T ss_pred             cc-cCccccccccccccCC-Cc--------ccchhhhhhhhhhcccCCCccchHHHHHHHHHHHHHhcCceeEEEEEEee
Confidence            52 2211111011111110 00        01112223333332   334443322 22222222111111123667774


Q ss_pred             -cCCCCchhHHHhhHHHHHHHHHHHH-HHHHHHHhchhhHHHHHHHHHHHHHHHHHHHHhcCCCcCcchHHHHHHHHHHh
Q 015168          241 -RGLNPSIIGGFSGLCASMGVAATFL-SAYLVRRLGILKAGAAGLIFQASLLAMAVAVYWSGSLSQQNPLLFFLCLIVLS  318 (412)
Q Consensus       241 -~gls~~~~G~~~~~~avggllGt~l-~~~l~~R~g~~r~~~~~~~~~~~~l~~~v~~~~~g~~~~~~~~~l~~~g~~~s  318 (412)
                       .|.++..++.+.+.....+..+.++ .|.+.+.+|.++....|+..+.+....-  .+.....      ..+..+++.+
T Consensus       271 ~f~w~~~~~s~~~~~~~~~~~i~~l~~~~~l~~~l~~~~~i~lGl~~~~~~~~~~--af~~~~w------~~~~~~v~~~  342 (463)
T KOG2816|consen  271 KFGWNKKEFSDLLSLVSILGIISQLLLLPLLSSILGEKRLISLGLLSEFLQLLLF--AFATETW------MMFAAGVVVA  342 (463)
T ss_pred             ecCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhHhhHHHHHHHHHHHHH--HHhccch------hhhHHHHHHH
Confidence             7999999998888877777777654 5588899999998777877665443221  2222211      1121222222


Q ss_pred             hhhhhhhhhhhhHHhhccCCcccchhHHHHHHHHHHHHHHHHHHH
Q 015168          319 RLGHMSYDIVGAQILQTGIPSSKANLIGTTEISVASLVESVMLGV  363 (412)
Q Consensus       319 r~GLw~~dl~~~~l~Q~~vp~~~~G~v~g~~~sl~~~~~ll~~~~  363 (412)
                      -.+.  ...+.....-..++++++|.+.+...-++.+.+.+...+
T Consensus       343 ~~~~--~~pa~~s~~s~~v~~~e~g~v~~~is~i~~l~~~~~~~~  385 (463)
T KOG2816|consen  343 LAGI--VFPAIRAFASILVSPEEQGKVFGIISGIEGLSGVVSPAL  385 (463)
T ss_pred             hhcc--hhHHHHhHHHhhcccccccchhhHHHHHHHHhhhhhHHH
Confidence            2222  446677777888899999999999988888876666555

>PF03092 BT1: BT1 family; InterPro: IPR004324 Members of this family are transmembrane proteins

Probab=98.48  E-value=4.9e-05  Score=78.26  Aligned_cols=347  Identities=17%  Similarity=0.142  Sum_probs=178.3

Q ss_pred             hhHHHHHHhhhhhcchhccCC-----cHHHHHHHHHHHHHHHHHHHHHHHHHhccccccccchhHHHHHHHHHHHHHHHH
Q 015168            4 FSKLILIVGGPLVGKLMDHSP-----RIPAYICLNTVQAAAQLLSAAMIIHAHTVIPTSSSMLLHPWFFVLVLAGAVERL   78 (412)
Q Consensus         4 ~~~lp~ll~g~~~G~~vDr~~-----R~~v~~~~~~~q~~~v~~s~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~l   78 (412)
                      ..++||.+ -|+.|.+.|..|     ||+=|..+-+...++    +.. .........+   . ....+..++......+
T Consensus        33 ~~~lPw~~-Kp~~g~lsD~~pi~G~rr~~Y~~i~~~~~~~~----~~~-~~~~~~~~~s---~-~~~~~~l~la~~g~a~  102 (433)
T PF03092_consen   33 LASLPWSI-KPLYGLLSDSFPIFGYRRKPYMIIGWLLGAVS----ALV-LALLPASESS---A-AIAVVLLFLASFGYAF  102 (433)
T ss_pred             HHhCchHH-hhhHHhhcccccccCCcchHHHHHHHHHHHHH----HHH-HHhcccccch---h-hhHHHHHHHHHHHHHH
Confidence            45678876 899999999996     444466665544222    111 1111111111   1 1122223334444555


Q ss_pred             HhhhhhhhhcccceeeecCCCchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhcChhHHHHHHHHHHHHHHHHHHHHHH
Q 015168           79 TGVALGVAVERDWAVLLAGINRPIALAKANAVLNRIDLLCEIAGASLFGILLSKYEPVTCLKFAAGLIMWSLPVMIILTW  158 (412)
Q Consensus        79 ~~~a~~~ai~RDwv~~l~~~~~~~~L~~~Ns~l~~id~v~~llgP~lgG~L~~~~~~~~~~~~~~~~~~~s~~~~~~~l~  158 (412)
                      .|++...-+.+     ...++ ++.-.+..|.......+..++|-.++|.+....+++..|.+.+....+.....+    
T Consensus       103 ~DV~aDa~vvE-----~~~~~-p~~~g~lqS~~~~~~~~G~lv~~~l~G~l~~~~~~~~~f~i~~~~~~l~~~~~~----  172 (433)
T PF03092_consen  103 ADVAADALVVE-----LARRE-PESRGDLQSFVWGVRSVGSLVGSLLSGPLLDSFGPQGVFLISAALPLLMLIVAL----  172 (433)
T ss_pred             HHHhhhHHHHH-----HhhcC-CchhHHHHHHHHHHHHHHHHHHHHhhhhhhhcCCCeEEehHHHHHHHHHHHHHH----
Confidence            66655432222     23333 223567788888889999999999999999999988877554333333322111    


Q ss_pred             HhhhccccccccccccccccCCCCCCCCCCchhhhHHhHHHHHHhHHHHhcCCcchHHHHHHHHHHHhhhccchH-HHHH
Q 015168          159 FTNKISSGVLDRAKCSQSCCRTSNEGPVPDADNIVDVGIEAIKLGWKEYMQQPVLPASLAYVLLCLNVVLTPGSL-MTAF  237 (412)
Q Consensus       159 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~v~~~~~~~a~l~~t~v~~~~~~-~~~y  237 (412)
                        .-.+| ...+++......++ +  ..+.   ......+.+.+-|+.+-+..++++.+.+-.++.. ....+.- .+-|
T Consensus       173 --~~~~e-~~~~~~~~~~~~~~-~--~~~~---~~~~~~~~~~~l~~~~~~~~i~~~~~~~~~~~~~-~~~~~~a~~fy~  242 (433)
T PF03092_consen  173 --FLLEE-RKVRPADEVFSFGK-E--EVPC---LFGSFREQLSELWRALQQRAIWQPILFFIFFFNL-PPSISSASSFYF  242 (433)
T ss_pred             --Hhhhh-ccccccchhhcccc-c--ccch---hhHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHh-ccCCCCccEEEE
Confidence              11121 11111000000000 0  0000   0011233444455544443455554422222211 1222211 2222


Q ss_pred             H-HhcC---CCCchhHHHhhHHHHHHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHH--Hh---cCCCcCcchH
Q 015168          238 L-TQRG---LNPSIIGGFSGLCASMGVAATFLSAYLVRRLGILKAGAAGLIFQASLLAMAVAV--YW---SGSLSQQNPL  308 (412)
Q Consensus       238 ~-~~~g---ls~~~~G~~~~~~avggllGt~l~~~l~~R~g~~r~~~~~~~~~~~~l~~~v~~--~~---~g~~~~~~~~  308 (412)
                      . ...+   +++..+|.+...++++.++|..++.+..++..-++...+.........+.-+..  -+   .|-+..+...
T Consensus       243 ~~~~~~gp~fs~~f~~~~~~vg~~~~l~g~~~y~~~~~~~~~R~~~~~t~~~~~~~~l~~~~lv~~~n~~~Gi~d~~f~l  322 (433)
T PF03092_consen  243 QTDALGGPHFSPSFYGTLSIVGSIASLLGILLYRKYFSNWSWRRIFVVTTLVSVLASLFDLLLVTRWNLDLGIPDQWFAL  322 (433)
T ss_pred             EeccccccccCHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHhcccEEEEEEEeeeeCcCCeEEEE
Confidence            2 3466   999999999999999999999999999999988777665543221111100000  00   1110000000


Q ss_pred             HHHHHHHHHhhhhhhhhhhhhhHHhhccCCcccchhHHHHHHHHHHHHHHHHHHHHHhc--------cCCCchhHHHHHH
Q 015168          309 LFFLCLIVLSRLGHMSYDIVGAQILQTGIPSSKANLIGTTEISVASLVESVMLGVAIIA--------NDVSHFGFLATLS  380 (412)
Q Consensus       309 ~l~~~g~~~sr~GLw~~dl~~~~l~Q~~vp~~~~G~v~g~~~sl~~~~~ll~~~~~~~~--------~~~~~f~~l~~~s  380 (412)
                      .--...-+..++..    +....+.-|.+|+..-|++.|+..+..|+....+..++..+        .+-+..++++++.
T Consensus       323 gd~~l~~~~~~i~~----mP~lvl~a~lcP~G~Egt~yall~s~~Nlg~~~s~~lg~~l~~~~~vt~~~f~~l~~lili~  398 (433)
T PF03092_consen  323 GDTILEEVIGMIAF----MPSLVLAARLCPKGSEGTVYALLASFSNLGSSVSSTLGAFLMELFGVTRDDFSNLWLLILIC  398 (433)
T ss_pred             EhHHHHHHHHHHHH----HHHHHHHHHHCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcccccchHHHHHHH
Confidence            00001112223333    45556677788999999999999999998766666554333        2334466666665


Q ss_pred             HHHH
Q 015168          381 LLSV  384 (412)
Q Consensus       381 ~~~v  384 (412)
                      ...-
T Consensus       399 ~~~~  402 (433)
T PF03092_consen  399 SVIQ  402 (433)
T ss_pred             HHHH
Confidence            5444

Several are Leishmania putative proteins that are thought to be pteridine transporters [, ]. This family also contains five putative Arabidopsis thaliana proteins of unknown function as well as two predicted prokaryotic proteins (from the cyanobacteria Synechocystis and Synechococcus).

>PF07690 MFS_1: Major Facilitator Superfamily; InterPro: IPR011701 Among the different families of transporter, only two occur ubiquitously in all classifications of organisms

Probab=98.41  E-value=2.2e-05  Score=76.57  Aligned_cols=134  Identities=16%  Similarity=0.081  Sum_probs=97.1

Q ss_pred             HH-HhcCCCCchhHHHhhHHHHHHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHHhcCCCcCcchHHHHHHHH
Q 015168          237 FL-TQRGLNPSIIGGFSGLCASMGVAATFLSAYLVRRLGILKAGAAGLIFQASLLAMAVAVYWSGSLSQQNPLLFFLCLI  315 (412)
Q Consensus       237 y~-~~~gls~~~~G~~~~~~avggllGt~l~~~l~~R~g~~r~~~~~~~~~~~~l~~~v~~~~~g~~~~~~~~~l~~~g~  315 (412)
                      ++ +++|.|+.++|++.+...++..+++...+++.+|+|++|....+.....+....+  .+.. +    ..  .+..+.
T Consensus        22 ~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~l~~~~~~~~~~~~~~--~~~~-~----~~--~~~~~~   92 (352)
T PF07690_consen   22 YLAEELGLSPSQIGLLFSAFFLGSALFSPFAGYLSDRFGRRRVLIIGLLLFALGSLLL--AFAS-N----FW--LLLIAR   92 (352)
T ss_dssp             HHHCCSTTTSHCHHHHHHHHHHHHHHHHHHHHHHHHHS-HHHHHHHHHHHHHHHHHHH--HHHC-C----HH--HHHHHH
T ss_pred             HHHHccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCeeeEeehhhhhhhHHHHh--hhhh-h----HH--HHhhhc
Confidence            44 4689999999999999999999999999999999999998887776554442222  1212 1    12  122233


Q ss_pred             HHhhhhhhhhhhhhhHHhhccCCcccchhHHHHHHHHHHHHHHHHHHHHHhccCCCchhHHHHH
Q 015168          316 VLSRLGHMSYDIVGAQILQTGIPSSKANLIGTTEISVASLVESVMLGVAIIANDVSHFGFLATL  379 (412)
Q Consensus       316 ~~sr~GLw~~dl~~~~l~Q~~vp~~~~G~v~g~~~sl~~~~~ll~~~~~~~~~~~~~f~~l~~~  379 (412)
                      ++.++|.-..+.+...+..+..|+++|+++++...+.......+...++....+.-.+.....+
T Consensus        93 ~l~g~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~~~l~~~~~~~~~~~~  156 (352)
T PF07690_consen   93 FLLGIGSGFFSPASNALIADWFPPEERGRAFGILSAGFSLGSILGPLLGGFLISYFGWRWAFLI  156 (352)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHCCCTCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHCHHCCHHHH
T ss_pred             cccccccccccccccccccccchhhhhhhccccccchhhhhhhcccchhhhhhhcccccccccc
Confidence            3445554457788889999999999999999999999998777777777766644444433333

These are the ATP-Binding Cassette (ABC) superfamily and the Major Facilitator Superfamily (MFS). The MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients [, ].; GO: 0055085 transmembrane transport, 0016021 integral to membrane; PDB: 2GFP_B 3O7P_A 3O7Q_A 1PW4_A.

>PRK10489 enterobactin exporter EntS; Provisional

Probab=98.40  E-value=1.1e-05  Score=82.05  Aligned_cols=159  Identities=8%  Similarity=-0.113  Sum_probs=99.0

Q ss_pred             HhHHHHhcCCcchHHHHHHHHHHHhhhccchHHHHHHHhcCCCCchhHHHhhHHHHHHHHHHHHHHHHHHHhchhhHHHH
Q 015168          202 LGWKEYMQQPVLPASLAYVLLCLNVVLTPGSLMTAFLTQRGLNPSIIGGFSGLCASMGVAATFLSAYLVRRLGILKAGAA  281 (412)
Q Consensus       202 ~g~~~~~~~~v~~~~~~~a~l~~t~v~~~~~~~~~y~~~~gls~~~~G~~~~~~avggllGt~l~~~l~~R~g~~r~~~~  281 (412)
                      ..++...+||.++..+....++...........+.|.++.+.|+.+.|+..+...++.++++...+++.+|+|++|....
T Consensus         8 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~~~~~l~~~~~~~~~G~l~dr~g~~~~l~~   87 (417)
T PRK10489          8 LDLSLLKTHPAFRAVFIARFISIFGLGLLGVAVPVQIQMMTGSTLQVGLSVTLTGGAMFIGLMVGGVLADRYDRKKLILL   87 (417)
T ss_pred             HHHHHHHhCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHhhHHHhhhcCCceEEEe
Confidence            45666678888887555444442101112234555667788899999999999999999999999999999999988776


Q ss_pred             HHHHHHHHHHHHHHHHhcCCCcCcchHHHHHHHHHHhhhhhhhhhhhhhHHhhccCCcccchhHHHHHHHHHHHHHHHHH
Q 015168          282 GLIFQASLLAMAVAVYWSGSLSQQNPLLFFLCLIVLSRLGHMSYDIVGAQILQTGIPSSKANLIGTTEISVASLVESVML  361 (412)
Q Consensus       282 ~~~~~~~~l~~~v~~~~~g~~~~~~~~~l~~~g~~~sr~GLw~~dl~~~~l~Q~~vp~~~~G~v~g~~~sl~~~~~ll~~  361 (412)
                      +.....+..............+  ...  +....++.+++-.....+.....++.+|+++|+++++......+....+..
T Consensus        88 ~~~~~~~~~~~~~~~~~~~~~~--~~~--l~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~  163 (417)
T PRK10489         88 ARGTCGLGFIGLALNAFLPEPS--LLA--IYLLGLWDGFFGSLGVTALLAATPALVGRENLMQAGAITMLTVRLGSVISP  163 (417)
T ss_pred             hHHHHHHHHHHHHHHHHcCCCc--HHH--HHHHHHHHHHHHHHHHHHHhhhhhhccCHHHHHHHHHHHHHHHhHHHHhHH
Confidence            6544333222211111111111  111  111222222222224456677888999999999999998877776555544


Q ss_pred             HHH
Q 015168          362 GVA  364 (412)
Q Consensus       362 ~~~  364 (412)
                      .++
T Consensus       164 ~l~  166 (417)
T PRK10489        164 ALG  166 (417)
T ss_pred             HHH
Confidence            444

>TIGR00710 efflux_Bcr_CflA drug resistance transporter, Bcr/CflA subfamily

Probab=98.37  E-value=3.1e-05  Score=76.92  Aligned_cols=126  Identities=15%  Similarity=0.053  Sum_probs=88.5

Q ss_pred             HHHHHHHhcCCCCchhHHHhhHHHHHHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHHhcCCCcCcchHHHHH
Q 015168          233 LMTAFLTQRGLNPSIIGGFSGLCASMGVAATFLSAYLVRRLGILKAGAAGLIFQASLLAMAVAVYWSGSLSQQNPLLFFL  312 (412)
Q Consensus       233 ~~~~y~~~~gls~~~~G~~~~~~avggllGt~l~~~l~~R~g~~r~~~~~~~~~~~~l~~~v~~~~~g~~~~~~~~~l~~  312 (412)
                      ..+.+.+++|+|+.+.|+..+...++...+..+.+++.+|+|++|....+.....+.....  .... +      ...+.
T Consensus        27 ~~p~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~d~~g~r~~~~~~~~~~~~~~~~~--~~~~-~------~~~~~   97 (385)
T TIGR00710        27 AFPEIAADLSTPASIVQMTLTLYLLGFAAGQLLWGPLSDRYGRRPVLLLGLFIFALSSLGL--ALSN-N------IETLL   97 (385)
T ss_pred             cHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhhhhHHHhcCChHHHHHHHHHHHHHHHHH--HHHc-c------HHHHH
Confidence            3445667899999999999999999999999999999999999998877654332222211  2211 1      11111


Q ss_pred             HHHHHhhhhhhhhhhhhhHHhhccCCcccchhHHHHHHHHHHHHHHHHHHHHHhc
Q 015168          313 CLIVLSRLGHMSYDIVGAQILQTGIPSSKANLIGTTEISVASLVESVMLGVAIIA  367 (412)
Q Consensus       313 ~g~~~sr~GLw~~dl~~~~l~Q~~vp~~~~G~v~g~~~sl~~~~~ll~~~~~~~~  367 (412)
                      .+.++.+++.-..+.....+.+|..|+++||++.+..++.......+...++...
T Consensus        98 ~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~l  152 (385)
T TIGR00710        98 VLRFVQAFGASAGSVISQALVRDIYPGEELSRIYSILMPVLALAPAVAPLLGGYI  152 (385)
T ss_pred             HHHHHHHcchhHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            2223334444446677788889999999999999999998887665555554443

This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 12 membrane-spanning regions. Members with known activity include Bcr (bicyclomycin resistance protein) in E. coli, Flor (chloramphenicol and florfenicol resistance) in Salmonella typhimurium DT104, and CmlA (chloramphenicol resistance) in Pseudomonas sp. plasmid R1033.

>TIGR00893 2A0114 d-galactonate transporter

Probab=98.34  E-value=1.1e-05  Score=79.51  Aligned_cols=133  Identities=14%  Similarity=0.026  Sum_probs=90.3

Q ss_pred             HHHHHHhcCCCCchhHHHhhHHHHHHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHHhcCCCcCcchHHHHHH
Q 015168          234 MTAFLTQRGLNPSIIGGFSGLCASMGVAATFLSAYLVRRLGILKAGAAGLIFQASLLAMAVAVYWSGSLSQQNPLLFFLC  313 (412)
Q Consensus       234 ~~~y~~~~gls~~~~G~~~~~~avggllGt~l~~~l~~R~g~~r~~~~~~~~~~~~l~~~v~~~~~g~~~~~~~~~l~~~  313 (412)
                      .+.+.+++|+|+.++|++.+...++..++....+++.+|+|++|...++.....+....+  .+.. +    ...  +..
T Consensus        17 ~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~r~~~~~~~~~~~~~~~~~--~~~~-~----~~~--~~~   87 (399)
T TIGR00893        17 APMLQEDLGLSAAQYGYVFSAFSWGYVVGQFPGGWLLDRFGARKTLAVFIVIWGVFTGLQ--AFAG-A----YVS--LYI   87 (399)
T ss_pred             HHHHHHhhCCChhhHHHHHHHHHHHHHHHHHhHHHHHHhcCcceeeHHHHHHHHHHHHHH--HHHc-C----HHH--HHH
Confidence            333456789999999999999999999999999999999999998877665432222221  2221 1    111  111


Q ss_pred             HHHHhhhhhhhhhhhhhHHhhccCCcccchhHHHHHHHHHHHHHHHHHHHHHhccCCCchhH
Q 015168          314 LIVLSRLGHMSYDIVGAQILQTGIPSSKANLIGTTEISVASLVESVMLGVAIIANDVSHFGF  375 (412)
Q Consensus       314 g~~~sr~GLw~~dl~~~~l~Q~~vp~~~~G~v~g~~~sl~~~~~ll~~~~~~~~~~~~~f~~  375 (412)
                      +.++.++|.-....+...+..|..|+++||++++...+.++...++...+.....+...+.+
T Consensus        88 ~~~l~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~  149 (399)
T TIGR00893        88 LRVLLGAAEAPFFPGIILIVASWFPASERATAVSIFNSAQGLGGIIGGPLVGWILIHFSWQW  149 (399)
T ss_pred             HHHHHHHHHHhhhhHHHHHHHHhCCHHHHHHHHHHHHHhchHHHHHHHHHHHHHHHhCCchH
Confidence            22223334334566777888899999999999999999988876666666554333333333

>PRK15462 dipeptide/tripeptide permease D; Provisional

Probab=98.34  E-value=0.0026  Score=66.59  Aligned_cols=118  Identities=14%  Similarity=0.026  Sum_probs=66.7

Q ss_pred             HHHHHhhhhhcchhccC-CcHHHHHHHHHHHHHHHHHHHHHHHHHhccccccccchhHHHHHHHHHHHHHHHHHhhhhhh
Q 015168            7 LILIVGGPLVGKLMDHS-PRIPAYICLNTVQAAAQLLSAAMIIHAHTVIPTSSSMLLHPWFFVLVLAGAVERLTGVALGV   85 (412)
Q Consensus         7 lp~ll~g~~~G~~vDr~-~R~~v~~~~~~~q~~~v~~s~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~l~~~a~~~   85 (412)
                      +...+..+..|.+.||+ +|||++....+...+.    ..  ........     . ..+++...+.....-++. ++..
T Consensus        56 ~~~~l~~ligG~LaDRilGrrr~iliG~il~~lg----~l--ll~~~~~~-----~-~~~~l~l~li~iG~G~~~-~~~~  122 (493)
T PRK15462         56 SLVYVTPILGGFLADKVLGNRMAVMLGALLMAIG----HV--VLGASEIH-----P-SFLYLSLAIIVCGYGLFK-SNVS  122 (493)
T ss_pred             HHHHHHHHHHHHHHHHccCcHHHHHHHHHHHHHH----HH--HHHHhhcc-----h-hHHHHHHHHHHHhccccc-ccHH
Confidence            34455677899999999 9999987776644332    11  11111100     0 112211111111111111 2222


Q ss_pred             hhcccceeeecCCCchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhcChhHHHHHH
Q 015168           86 AVERDWAVLLAGINRPIALAKANAVLNRIDLLCEIAGASLFGILLSKYEPVTCLKFA  142 (412)
Q Consensus        86 ai~RDwv~~l~~~~~~~~L~~~Ns~l~~id~v~~llgP~lgG~L~~~~~~~~~~~~~  142 (412)
                      ++..|    +++++++ +..+..+..-....+...++|.++|.+.+..||+.+|...
T Consensus       123 alv~e----lfp~~~~-~R~sgf~i~Y~~~nlG~~iap~l~g~L~~~~Gw~~~F~ia  174 (493)
T PRK15462        123 CLLGE----LYEPTDP-RRDGGFSLMYAAGNVGSIIAPIACGYAQEEYSWAMGFGLA  174 (493)
T ss_pred             HHHHH----HCCCCCc-cccceehHHHHHHHHHHHHHHHHHHHHHhhhChHHHHHHH
Confidence            33334    6665322 4555666666666688999999999999989999988653

>TIGR00900 2A0121 H+ Antiporter protein

Probab=98.31  E-value=3.5e-05  Score=75.46  Aligned_cols=132  Identities=14%  Similarity=0.072  Sum_probs=91.3

Q ss_pred             HHHHHHHhcCCCCchhHHHhhHHHHHHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHHhcCCCcCcchHHHHH
Q 015168          233 LMTAFLTQRGLNPSIIGGFSGLCASMGVAATFLSAYLVRRLGILKAGAAGLIFQASLLAMAVAVYWSGSLSQQNPLLFFL  312 (412)
Q Consensus       233 ~~~~y~~~~gls~~~~G~~~~~~avggllGt~l~~~l~~R~g~~r~~~~~~~~~~~~l~~~v~~~~~g~~~~~~~~~l~~  312 (412)
                      ..+.|..+.+.++.++|++.+...++.+++....+++.+|+|++|...++......+..........+..    ....+.
T Consensus        21 ~~~~~~~~~~~s~~~~g~~~~~~~~~~~i~~~~~G~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~   96 (365)
T TIGR00900        21 ALPLYVLAGTGSASVLSLAALAGMLPYVVLSPIAGALADRYDRKKVMIGADLIRAVLVAVLPFVALLGGL----NIWQVY   96 (365)
T ss_pred             HHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHhhhHHHHhhchhHHHHHHHHHHHHHHHHHHHHHHcCCC----cHHHHH
Confidence            3566888899999999999999999999999999999999999998887765433222221111111110    111111


Q ss_pred             HHHHHhhhhhhhhhhhhhHHhhccCCcccchhHHHHHHHHHHHHHHHHHHHHHhcc
Q 015168          313 CLIVLSRLGHMSYDIVGAQILQTGIPSSKANLIGTTEISVASLVESVMLGVAIIAN  368 (412)
Q Consensus       313 ~g~~~sr~GLw~~dl~~~~l~Q~~vp~~~~G~v~g~~~sl~~~~~ll~~~~~~~~~  368 (412)
                      .+..+.+++.-.++.+...+..+.+|+++|+++++..++.......+...++....
T Consensus        97 ~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~~~l~  152 (365)
T TIGR00900        97 VLAGILAIAQAFFTPAYQAMLPDLVPEEQLTQANSLSQAVRSLFYIVGPGIGGLMY  152 (365)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHhHHHHHHHHHHHHHHHHHHHHH
Confidence            22222333443466777888889999999999999999998886666666655443

>PRK11102 bicyclomycin/multidrug efflux system; Provisional

Probab=98.28  E-value=2.7e-05  Score=77.45  Aligned_cols=128  Identities=8%  Similarity=-0.004  Sum_probs=89.9

Q ss_pred             HHHHHHHhcCCCCchhHHHhhHHHHHHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHHhcCCCcCcchHHHHH
Q 015168          233 LMTAFLTQRGLNPSIIGGFSGLCASMGVAATFLSAYLVRRLGILKAGAAGLIFQASLLAMAVAVYWSGSLSQQNPLLFFL  312 (412)
Q Consensus       233 ~~~~y~~~~gls~~~~G~~~~~~avggllGt~l~~~l~~R~g~~r~~~~~~~~~~~~l~~~v~~~~~g~~~~~~~~~l~~  312 (412)
                      ..+.|.+++|+|+.+.|+..+...++..++....+++.+|+|+++...++......+...+  .+.. .   .....   
T Consensus        13 ~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~i~~~~~--~~~~-~---~~~~~---   83 (377)
T PRK11102         13 ALPVIAADFGVSAGSVQMTLSAYILGFAIGQLFYGPMADSFGRKPVILGGTLVFALAAVAC--ALAQ-T---IDQLI---   83 (377)
T ss_pred             cHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhhchHHhhcCChHHHHHHHHHHHHHHHHH--HHHc-c---HHHHH---
Confidence            3667778899999999999999999999999999999999999998887766544333322  2111 1   01111   


Q ss_pred             HHHHHhhhhhhhhhhhhhHHhhccCCcccchhHHHHHHHHHHHHHHHHHHHHHhccC
Q 015168          313 CLIVLSRLGHMSYDIVGAQILQTGIPSSKANLIGTTEISVASLVESVMLGVAIIAND  369 (412)
Q Consensus       313 ~g~~~sr~GLw~~dl~~~~l~Q~~vp~~~~G~v~g~~~sl~~~~~ll~~~~~~~~~~  369 (412)
                      .+.++.+++.-..+.....+.++..|+++||++.+...........+...+.....+
T Consensus        84 ~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~  140 (377)
T PRK11102         84 YMRFLHGLAAAAASVVINALMRDMFPKEEFSRMMSFVTLVMTIAPLLAPIIGGWLLV  140 (377)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            112222333334566777888888999999999999988887766666655544433

>KOG2533 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]

Probab=98.28  E-value=0.00017  Score=75.24  Aligned_cols=235  Identities=17%  Similarity=0.063  Sum_probs=144.3

Q ss_pred             hhHHHHHHhhhhhcchhccCCcHHHHHHHHHHHHHHHHHHHHHHHHHhccccccccchhHHHHHHHHHHHHHHHHHhhhh
Q 015168            4 FSKLILIVGGPLVGKLMDHSPRIPAYICLNTVQAAAQLLSAAMIIHAHTVIPTSSSMLLHPWFFVLVLAGAVERLTGVAL   83 (412)
Q Consensus         4 ~~~lp~ll~g~~~G~~vDr~~R~~v~~~~~~~q~~~v~~s~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~l~~~a~   83 (412)
                      +-++.++++-.+.|.+.||.|=.+.|..+.+.-.....+.+      . ..      ..+.+.++=+++|.+|...-.+.
T Consensus        89 ~F~v~Yii~~~p~~~L~~r~~ls~~l~~~~~~w~~~~~~~~------~-~~------s~~~~ialr~llGl~es~~wP~~  155 (495)
T KOG2533|consen   89 VFYVGYIIGQFPSGLLGDRFPLSKGLSVSGILWGLFGFLTA------A-VH------SFPGLIALRFLLGLFESGGWPGV  155 (495)
T ss_pred             HHHHHHHHHHhhHHHHHHhCChHHHHHHHHHHHHHHHHHHH------H-Hh------hhHHHHHHHHHHHHHhcccchHH
Confidence            34678899999999999999966666666543222111111      1 11      11234444567888887766665


Q ss_pred             hhhhcccceeeecCCCchhhhHHHHHHHHHHHHHHHHHHHHHHHHHH------hhcChhHHHHHHHHHHHHHHHHHHHHH
Q 015168           84 GVAVERDWAVLLAGINRPIALAKANAVLNRIDLLCEIAGASLFGILL------SKYEPVTCLKFAAGLIMWSLPVMIILT  157 (412)
Q Consensus        84 ~~ai~RDwv~~l~~~~~~~~L~~~Ns~l~~id~v~~llgP~lgG~L~------~~~~~~~~~~~~~~~~~~s~~~~~~~l  157 (412)
                      ..-+.+     -++++   ++....+..-.-.++++++|.++...+.      ...||+..|++..   ++++...++  
T Consensus       156 ~~~lg~-----wy~~~---e~g~r~~~~~a~~~~g~i~ggliA~g~~~~~~~~~~~gW~~~FiI~G---~i~~~~gi~--  222 (495)
T KOG2533|consen  156 VAILGN-----WYGKS---ERGLRMGIWYASASLGNIFGGLIAYGVFKLNGSGGLAGWRWLFIIEG---VITLVLGIV--  222 (495)
T ss_pred             HHHHHh-----hcChh---hhhhhHHHHHHhcchhhHHHHHHHHHhhhhcCCCCcCCceeehhHHH---HHHHHHHhe--
Confidence            443332     36654   7888889999999999999999998873      4678999887643   444433222  


Q ss_pred             HHhhhcccccccccccccccc------CCCCCCCCCCchhhhHHhHHHHHHhHHHHhcCCcchH-HHHHHHHHHHhhhcc
Q 015168          158 WFTNKISSGVLDRAKCSQSCC------RTSNEGPVPDADNIVDVGIEAIKLGWKEYMQQPVLPA-SLAYVLLCLNVVLTP  230 (412)
Q Consensus       158 ~~~~~~~~~~l~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~v~~~-~~~~a~l~~t~v~~~  230 (412)
                       ....+|+ .|.+.+-.++.+      +.+++++... .+   . +  -..+++..+++|..++ ++...+.... --++
T Consensus       223 -~f~~lp~-~P~~~~fl~~~ek~~~~~~~~~~~~~~~-~~---~-~--~~~~~~~a~~dp~vw~~~l~~~~~~lv-~~~~  292 (495)
T KOG2533|consen  223 -VFFFLPD-NPSKAWFLTDEEKELVVERLRESPSGGI-EN---K-F--KWKGFKEALKDPGVWPFSLCYFFLKLV-NYGF  292 (495)
T ss_pred             -EEEEecC-ChhhccccchHHHHHHHHHHHhccCCCc-cc---c-c--CHHHHHHHHhchhHHHHHHHHHHHhhc-cccH
Confidence             1123332 111000000000      0000000000 00   0 1  1246777888998877 4444444432 2335


Q ss_pred             chHHHHHHHh-cCCCCchhHHHhhHHHHHHHHHHHHHHHHHHHhc
Q 015168          231 GSLMTAFLTQ-RGLNPSIIGGFSGLCASMGVAATFLSAYLVRRLG  274 (412)
Q Consensus       231 ~~~~~~y~~~-~gls~~~~G~~~~~~avggllGt~l~~~l~~R~g  274 (412)
                      .+..+.|+++ .|+|+.+-..+-....++|++|+++++.+..|++
T Consensus       293 ~~~lpl~l~~~~~~s~~~a~~ls~~~~~~g~v~~i~ag~lsdr~~  337 (495)
T KOG2533|consen  293 SYWLPLYLKSNGGYSELQANLLSTPYDVGGIVGLILAGYLSDRLK  337 (495)
T ss_pred             HHHHHHHHHcCCCcChHHhccccchHHhhhHHHHHHHHHHHHHHh
Confidence            6678888987 6899999999999999999999999999999975

>PF06609 TRI12: Fungal trichothecene efflux pump (TRI12); InterPro: IPR010573 This family consists of several fungal specific trichothecene efflux pump proteins

Probab=98.25  E-value=0.001  Score=70.83  Aligned_cols=109  Identities=16%  Similarity=0.101  Sum_probs=65.5

Q ss_pred             hhHHHhhHHHHHHHHHHHHHHHHHHHhchhhHHHH-HHHHHHHHHHHHHHHHhcCCCcCcchHHHHHHHHHHhhhhhhhh
Q 015168          247 IIGGFSGLCASMGVAATFLSAYLVRRLGILKAGAA-GLIFQASLLAMAVAVYWSGSLSQQNPLLFFLCLIVLSRLGHMSY  325 (412)
Q Consensus       247 ~~G~~~~~~avggllGt~l~~~l~~R~g~~r~~~~-~~~~~~~~l~~~v~~~~~g~~~~~~~~~l~~~g~~~sr~GLw~~  325 (412)
                      ..|+.-...+++...|..+.+.+.+++++.|-.++ +..++..+.. +....-+.... ..-.+.++.|     +|.-..
T Consensus       350 ~~~~~s~~~~fg~~~g~~i~g~l~~~ir~~Kw~li~~~~~~ta~~G-ama~~~~~n~~-~~i~~~~l~g-----~giG~~  422 (599)
T PF06609_consen  350 EIGWISSPVGFGSCAGAVILGLLFSKIRHIKWQLIFGSVLMTAFCG-AMAAVRPDNKN-AAIAFLVLAG-----FGIGGI  422 (599)
T ss_pred             eeehhhhhHHHHHHHHHHHHHHHHHHccchhHHHHHHHHHHHHHHH-HHHHccCCCcc-hHHHHHHHHH-----HhHHHH
Confidence            46666677788888888999999999988876643 3333322111 11111121111 1112222333     333234


Q ss_pred             hhhhhHHhhccCCcccchhHHHHHHHHHHHHHHHHHH
Q 015168          326 DIVGAQILQTGIPSSKANLIGTTEISVASLVESVMLG  362 (412)
Q Consensus       326 dl~~~~l~Q~~vp~~~~G~v~g~~~sl~~~~~ll~~~  362 (412)
                      .+......|-.+|+++.|.++|+..+.....+.+.+.
T Consensus       423 ~~~~~~~~ql~~p~~~ig~a~gL~~s~R~~GGsIg~a  459 (599)
T PF06609_consen  423 LVPAIVIAQLIVPDEDIGTATGLTGSIRSIGGSIGYA  459 (599)
T ss_pred             HHHHHHeeEeeeCchHHHHHHHHHHHHHHHhhHHHHH
Confidence            4555667788999999999999999998875554443

Many of the genes involved in trichothecene toxin biosynthesis in Fusarium sporotrichioides are present within a gene cluster. It has been suggested that TRI12 may play a role in F. sporotrichioides self-protection against trichothecenes [].

>PF05631 DUF791: Protein of unknown function (DUF791); InterPro: IPR008509 This family consists of several eukaryotic proteins of unknown function

Probab=98.24  E-value=0.00027  Score=70.04  Aligned_cols=229  Identities=15%  Similarity=0.060  Sum_probs=118.3

Q ss_pred             hhHHHHHHhhhhhcchhccCCcHHHHHHHHHHHHHHHHHHHHHHHHHhccccccccchhHHHHHHHHHHHHHHHHHhhhh
Q 015168            4 FSKLILIVGGPLVGKLMDHSPRIPAYICLNTVQAAAQLLSAAMIIHAHTVIPTSSSMLLHPWFFVLVLAGAVERLTGVAL   83 (412)
Q Consensus         4 ~~~lp~ll~g~~~G~~vDr~~R~~v~~~~~~~q~~~v~~s~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~l~~~a~   83 (412)
                      +..++.+++|+++|.+.||++|||..+..-+..    +++|.     .+..+     ..+.+++-=++.|....+...+.
T Consensus        77 ~Gf~Ss~i~g~~~G~laD~~Grk~~cl~~cily----~~scl-----~k~~~-----~~~~L~~GRvlgGiaTSLLfS~F  142 (354)
T PF05631_consen   77 AGFASSAIFGTFVGSLADRYGRKKACLLFCILY----SLSCL-----TKHSS-----NYPVLLLGRVLGGIATSLLFSAF  142 (354)
T ss_pred             HHHHHHHHHHHHHHHHHHhcCchHHHHHHHHHH----HHHHH-----HHhcc-----ccHHHHHHHHHHHHHHHHHHHHH
Confidence            356778999999999999999999866554433    44453     12221     11223333334444443333322


Q ss_pred             hhhhcccceeeecCCC--chhhhHHHHHHHH-HHHHHHHHHHHHHHHHHHhhcC--hhHHHHHHHHHHHHHHHHHHHHHH
Q 015168           84 GVAVERDWAVLLAGIN--RPIALAKANAVLN-RIDLLCEIAGASLFGILLSKYE--PVTCLKFAAGLIMWSLPVMIILTW  158 (412)
Q Consensus        84 ~~ai~RDwv~~l~~~~--~~~~L~~~Ns~l~-~id~v~~llgP~lgG~L~~~~~--~~~~~~~~~~~~~~s~~~~~~~l~  158 (412)
                          | +|.+.=.++.  +++.|.+.-+.+. ..+.+.-+++-.++-.+....+  +...|.......+++.       .
T Consensus       143 ----E-sW~V~Eh~~~g~~~~~L~~tF~~~tf~~n~~vAI~aGv~a~~l~~~~~~g~vaPF~~a~~~l~~~~-------~  210 (354)
T PF05631_consen  143 ----E-SWMVHEHNKRGFPQEWLSDTFSLATFFGNGVVAIGAGVVANVLADWFGFGPVAPFDAAIVLLAVAA-------V  210 (354)
T ss_pred             ----H-HHHHHHHHHcCCChHHHHHHHHHHHHHHhHHHHHHHhHHHHHHHHHhCCCCcchHHHHHHHHHHHH-------H
Confidence                2 2543333211  1235666666565 4455566666666666666543  3444432111112111       1


Q ss_pred             HhhhccccccccccccccccCCCCCCCCCCchhhhHHhHHHHHHhHHHHhcCCcchHHHHHHHHHHHhhhccchHHHHHH
Q 015168          159 FTNKISSGVLDRAKCSQSCCRTSNEGPVPDADNIVDVGIEAIKLGWKEYMQQPVLPASLAYVLLCLNVVLTPGSLMTAFL  238 (412)
Q Consensus       159 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~v~~~~~~~a~l~~t~v~~~~~~~~~y~  238 (412)
                      .+.+.+++....+.               + +   ....++.+++++...+||.....-..-.+|       ++.+.+|.
T Consensus       211 ~I~~~W~ENyg~~~---------------~-~---~~~~~~~~~a~~~i~~d~ril~LG~~qslF-------E~smy~FV  264 (354)
T PF05631_consen  211 LILKTWPENYGDTS---------------S-S---SSLSGSFREAWRAILSDPRILLLGLIQSLF-------EGSMYLFV  264 (354)
T ss_pred             HHHhcccccCCCcc---------------c-c---cchHHHHHHHHHHHHcCchhHHHHHHHHHH-------HHHHHHhe
Confidence            12222221111000               0 0   123456778999999988766522222233       11133321


Q ss_pred             ---H-hcC--CCCchhHHHhhHHHHHHHHHHHHHHHHHH-HhchhhHHHHHHH
Q 015168          239 ---T-QRG--LNPSIIGGFSGLCASMGVAATFLSAYLVR-RLGILKAGAAGLI  284 (412)
Q Consensus       239 ---~-~~g--ls~~~~G~~~~~~avggllGt~l~~~l~~-R~g~~r~~~~~~~  284 (412)
                         + .+.  =.+.-+|++++.--+..++|+.+++++.. +....+.+.....
T Consensus       265 flWtPaL~~~~~~~P~GlIFssFM~a~MlGS~lf~~l~s~~~~~e~~l~~v~~  317 (354)
T PF05631_consen  265 FLWTPALDPDDEELPLGLIFSSFMVAMMLGSSLFSRLLSKSLRPESLLRYVFA  317 (354)
T ss_pred             eeeeceecCCCCCCCchHHHHHHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHH
Confidence               1 111  12334999999999999999999987654 4444444443333

>PRK11663 regulatory protein UhpC; Provisional

Probab=98.21  E-value=7.8e-05  Score=76.36  Aligned_cols=128  Identities=17%  Similarity=0.046  Sum_probs=85.9

Q ss_pred             ccchHHHHHHHhcCCCCchhHHHhhHHHHHHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHHhcCCCcCcchH
Q 015168          229 TPGSLMTAFLTQRGLNPSIIGGFSGLCASMGVAATFLSAYLVRRLGILKAGAAGLIFQASLLAMAVAVYWSGSLSQQNPL  308 (412)
Q Consensus       229 ~~~~~~~~y~~~~gls~~~~G~~~~~~avggllGt~l~~~l~~R~g~~r~~~~~~~~~~~~l~~~v~~~~~g~~~~~~~~  308 (412)
                      .++.....+.+++|+|+.+.|++.+...++..++....+++.+|+|+++...++.....++....  .... +   ....
T Consensus        41 ~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~G~l~dr~g~r~~~~~~~~~~~~~~~~~--~~~~-~---~~~l  114 (434)
T PRK11663         41 SFNAAMPEMLADLGLSRSDIGLLATLFYITYGVSKFVSGIVSDRSNARYFMGIGLIATGIINILF--GFSS-S---LWAF  114 (434)
T ss_pred             hHHHhhHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhhhhHHHhhcCCchhHHHHHHHHHHHHHHH--HHHh-H---HHHH
Confidence            34455666777899999999999999999999999999999999999998877665433222211  2111 1   1111


Q ss_pred             H--HHHHHHHHhhhhhhhhhhhhhHHhhccCCcccchhHHHHHHHHHHHHHHHHHHHHHhc
Q 015168          309 L--FFLCLIVLSRLGHMSYDIVGAQILQTGIPSSKANLIGTTEISVASLVESVMLGVAIIA  367 (412)
Q Consensus       309 ~--l~~~g~~~sr~GLw~~dl~~~~l~Q~~vp~~~~G~v~g~~~sl~~~~~ll~~~~~~~~  367 (412)
                      +  .++.|+.   .|.  .-.+...+.++..|+++||++.|..++.++....+...+....
T Consensus       115 ~~~~~l~g~~---~g~--~~~~~~~~~~~~~~~~~rg~~~~~~~~~~~~g~~~~~~~~~~l  170 (434)
T PRK11663        115 ALLWVLNAFF---QGW--GWPVCAKLLTAWYSRTERGGWWAIWNTAHNVGGALIPLVVGAI  170 (434)
T ss_pred             HHHHHHHHHH---HHc--cchHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            1  1112221   122  2245567788888999999999999999887666555544333

>PRK11551 putative 3-hydroxyphenylpropionic transporter MhpT; Provisional

Probab=98.20  E-value=9.1e-05  Score=74.62  Aligned_cols=134  Identities=9%  Similarity=0.004  Sum_probs=89.9

Q ss_pred             HHHHHHhcCCCCchhHHHhhHHHHHHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHHhcCCCcCcchHHHHHH
Q 015168          234 MTAFLTQRGLNPSIIGGFSGLCASMGVAATFLSAYLVRRLGILKAGAAGLIFQASLLAMAVAVYWSGSLSQQNPLLFFLC  313 (412)
Q Consensus       234 ~~~y~~~~gls~~~~G~~~~~~avggllGt~l~~~l~~R~g~~r~~~~~~~~~~~~l~~~v~~~~~g~~~~~~~~~l~~~  313 (412)
                      .+.+.+++|+|+.+.|+..+...++.++++...+++.+|+|++|....+.....++...+  .+.. +    ...++  .
T Consensus        38 ~~~~~~~~~~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~--~~~~-~----~~~~~--~  108 (406)
T PRK11551         38 APRMAQEFGLDVAQMGWAFSAGILGLLPGALLGGRLADRIGRKRILIVSVALFGLFSLAT--AQAW-D----FPSLL--V  108 (406)
T ss_pred             HHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchhHHHHHHHHHHHHHHH--HHhc-c----HHHHH--H
Confidence            444556799999999999999999999999999999999999999887765433222211  2221 1    11111  1


Q ss_pred             HHHHhhhhhhhhhhhhhHHhhccCCcccchhHHHHHHHHHHHHHHHHHHHHHhccCCCchhHH
Q 015168          314 LIVLSRLGHMSYDIVGAQILQTGIPSSKANLIGTTEISVASLVESVMLGVAIIANDVSHFGFL  376 (412)
Q Consensus       314 g~~~sr~GLw~~dl~~~~l~Q~~vp~~~~G~v~g~~~sl~~~~~ll~~~~~~~~~~~~~f~~l  376 (412)
                      +.++.+++.-........+.+|..|+++||++++...........+...+.....+...+...
T Consensus       109 ~~~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~  171 (406)
T PRK11551        109 ARLLTGVGLGGALPNLIALTSEAVGPRLRGTAVSLMYCGVPFGGALASVIGVLAAGDAAWRHI  171 (406)
T ss_pred             HHHHHHhhHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccCHHHH
Confidence            122223332223445667788888999999999999988877666666666555554444433

>TIGR00897 2A0118 polyol permease family

Probab=98.20  E-value=0.00016  Score=73.11  Aligned_cols=126  Identities=16%  Similarity=0.120  Sum_probs=81.3

Q ss_pred             HHHHHHhcCCCCchhHHHhhHHHHHHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHHhcCCCcCcchHHHHHH
Q 015168          234 MTAFLTQRGLNPSIIGGFSGLCASMGVAATFLSAYLVRRLGILKAGAAGLIFQASLLAMAVAVYWSGSLSQQNPLLFFLC  313 (412)
Q Consensus       234 ~~~y~~~~gls~~~~G~~~~~~avggllGt~l~~~l~~R~g~~r~~~~~~~~~~~~l~~~v~~~~~g~~~~~~~~~l~~~  313 (412)
                      ...|.+++|+|+.+.|+..+...++..+++...+++.+|+|++|...++......+...... ......+  ...++.  
T Consensus        36 ~~~~~~~~g~s~~~~g~~~~~~~~~~~i~~~~~g~l~dr~g~k~~l~~~~~~~~~~~~~~~~-~~~~~~~--~~~l~~--  110 (402)
T TIGR00897        36 LSPFLKALGLSPQQSASAFTLYGIAAAISAWISGVVAEIIGPLKTMMIGLLLWCVGHAAFIV-FGLGHAN--YPLILL--  110 (402)
T ss_pred             HHHHHHHhCCCHHHhHHHHHHHHHHHHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHHHH-HhccCcc--HHHHHH--
Confidence            45577789999999999999999999999999999999999999988776644333222111 1111101  111111  


Q ss_pred             HHHHhhhhhhhhhhhhhHHhhccCCcccchhHHHHHHHHHHHHH-HHHHHHH
Q 015168          314 LIVLSRLGHMSYDIVGAQILQTGIPSSKANLIGTTEISVASLVE-SVMLGVA  364 (412)
Q Consensus       314 g~~~sr~GLw~~dl~~~~l~Q~~vp~~~~G~v~g~~~sl~~~~~-ll~~~~~  364 (412)
                      .-...++|.-...........+..|+++||+++|...+.++... .....+.
T Consensus       111 ~~~i~G~g~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~g~~~~  162 (402)
T TIGR00897       111 FYGIRGLGYPLFAYSFLVWVVYNTKQDNLSSAVGWFWAVYSIGIGVFGSYYS  162 (402)
T ss_pred             HHHHHHcchHHHHhHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            11112333322333444556677899999999999998877643 3344443

This family of proteins includes the ribitol and D-arabinitol transporters from Klebsiella pneumoniae and the alpha-ketoglutarate permease from Bacillus subtilis.

>TIGR00895 2A0115 benzoate transport

Probab=98.19  E-value=5.8e-05  Score=74.87  Aligned_cols=125  Identities=13%  Similarity=0.005  Sum_probs=86.7

Q ss_pred             HHHHHHhcCCCCchhHHHhhHHHHHHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHHhcCCCcCcchHHHHHH
Q 015168          234 MTAFLTQRGLNPSIIGGFSGLCASMGVAATFLSAYLVRRLGILKAGAAGLIFQASLLAMAVAVYWSGSLSQQNPLLFFLC  313 (412)
Q Consensus       234 ~~~y~~~~gls~~~~G~~~~~~avggllGt~l~~~l~~R~g~~r~~~~~~~~~~~~l~~~v~~~~~g~~~~~~~~~l~~~  313 (412)
                      .+.+.+++|.|+.+.|++.+...++.+++..+.+++.+|+|+++...++.....++....  .+ ..+    ...  +..
T Consensus        40 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~--~~-~~~----~~~--~~~  110 (398)
T TIGR00895        40 APAISAEWGLDPVQLGFLFSAGLIGMAFGALFFGPLADRIGRKRVLLWSILLFSVFTLLC--AL-ATN----VTQ--LLI  110 (398)
T ss_pred             HHHHhhccCCCHHHHHHHHHHHHHHHHHHHHHhHHHHHHhhhHHHHHHHHHHHHHHHHHH--HH-ccc----hHH--HHH
Confidence            344456789999999999999999999999999999999999988887765433322221  21 111    111  111


Q ss_pred             HHHHhhhhhhhhhhhhhHHhhccCCcccchhHHHHHHHHHHHHHHHHHHHHHhc
Q 015168          314 LIVLSRLGHMSYDIVGAQILQTGIPSSKANLIGTTEISVASLVESVMLGVAIIA  367 (412)
Q Consensus       314 g~~~sr~GLw~~dl~~~~l~Q~~vp~~~~G~v~g~~~sl~~~~~ll~~~~~~~~  367 (412)
                      +.++.+++.-........+..+..|+++||++++...+.+.....+...+....
T Consensus       111 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l  164 (398)
T TIGR00895       111 LRFLAGLGLGGLMPNLNALVSEYAPKRFRGTAVGLMFCGYPIGAAVGGFLAGWL  164 (398)
T ss_pred             HHHHHhcccccchhhHHHHHHHHcCHHhhchhHhhHhhHHHHHHHHHHHHHHHH
Confidence            222333444345667778888889999999999999988887666555554333

>PRK10091 MFS transport protein AraJ; Provisional

Probab=98.18  E-value=0.00012  Score=73.43  Aligned_cols=130  Identities=16%  Similarity=0.045  Sum_probs=84.9

Q ss_pred             chHHHHHHHhcCCCCchhHHHhhHHHHHHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHHhcCCCcCcchHHH
Q 015168          231 GSLMTAFLTQRGLNPSIIGGFSGLCASMGVAATFLSAYLVRRLGILKAGAAGLIFQASLLAMAVAVYWSGSLSQQNPLLF  310 (412)
Q Consensus       231 ~~~~~~y~~~~gls~~~~G~~~~~~avggllGt~l~~~l~~R~g~~r~~~~~~~~~~~~l~~~v~~~~~g~~~~~~~~~l  310 (412)
                      .+..+.+.+++|+|+++.|+..+...++.+.+....+++.+|+|++|....+.....+....+  .+.+ +   ....++
T Consensus        23 ~~~l~~~~~~~g~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~l~--~~~~-~---~~~l~~   96 (382)
T PRK10091         23 MGVLTELAHDVGISIPAAGHMISYYALGVVVGAPIIALFSSRYSLKHILLFLVALCVIGNAMF--TLSS-S---YLMLAI   96 (382)
T ss_pred             HhChHHHHHHcCCCHHHHhHHHHHHHHHHHHHHHHHHHHHccCccHHHHHHHHHHHHHHHHHH--HHhC-c---HHHHHH
Confidence            344666777899999999999999999999999999999999999999887765433222221  2222 1   111111


Q ss_pred             HHHHHHHhhhhhhhhhhhhhHHhhccCCcccchhHHHHHHHHHHHHHHHHHHHHHhccC
Q 015168          311 FLCLIVLSRLGHMSYDIVGAQILQTGIPSSKANLIGTTEISVASLVESVMLGVAIIAND  369 (412)
Q Consensus       311 ~~~g~~~sr~GLw~~dl~~~~l~Q~~vp~~~~G~v~g~~~sl~~~~~ll~~~~~~~~~~  369 (412)
                         +-++.+++.-..-.....+.++..|+++|+++.+...+.+.....+...++....+
T Consensus        97 ---~r~l~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~~~l~~  152 (382)
T PRK10091         97 ---GRLVSGFPHGAFFGVGAIVLSKIIKPGKVTAAVAGMVSGMTVANLLGIPLGTYLSQ  152 (382)
T ss_pred             ---HHHHHHhhhHHHHHHHHHHHHHhCChHHhhHHHHHHHHHHHHHHHHhccHHHHHhh
Confidence               11222222211223445567788899999999998887777655554444444443

>PRK11646 multidrug resistance protein MdtH; Provisional

Probab=98.17  E-value=0.00011  Score=74.40  Aligned_cols=126  Identities=14%  Similarity=0.091  Sum_probs=87.3

Q ss_pred             HHHHH-HhcCCCCchhHHHhhHHHHHHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHHhcCCCcCcchHHHHH
Q 015168          234 MTAFL-TQRGLNPSIIGGFSGLCASMGVAATFLSAYLVRRLGILKAGAAGLIFQASLLAMAVAVYWSGSLSQQNPLLFFL  312 (412)
Q Consensus       234 ~~~y~-~~~gls~~~~G~~~~~~avggllGt~l~~~l~~R~g~~r~~~~~~~~~~~~l~~~v~~~~~g~~~~~~~~~l~~  312 (412)
                      ...|. +++|.|+..+|+..+...+.......+.+++.+|+|+++...++.....+....+  . ...+   ...+++  
T Consensus        33 ~~~~~~~~~g~s~~~~gl~~~~~~l~~~~~~~~~G~l~dr~g~k~~l~~~~~~~~~~~~~~--~-~~~~---~~~l~~--  104 (400)
T PRK11646         33 ISIRFVDQLGWAAVMVGIALGLRQFIQQGLGIFGGAIADRFGAKPMIVTGMLMRAAGFATM--A-IAHE---PWLLWL--  104 (400)
T ss_pred             HHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHhhhhHHHHHhCchHHHHHHHHHHHHHHHHH--H-Hhcc---HHHHHH--
Confidence            44455 5689999999999999999999999999999999999999887766543332222  1 1111   111111  


Q ss_pred             HHHHHhhhhhhhhhhhhhHHhhccCCcccchhHHHHHHHHHHHHHHHHHHHHHhcc
Q 015168          313 CLIVLSRLGHMSYDIVGAQILQTGIPSSKANLIGTTEISVASLVESVMLGVAIIAN  368 (412)
Q Consensus       313 ~g~~~sr~GLw~~dl~~~~l~Q~~vp~~~~G~v~g~~~sl~~~~~ll~~~~~~~~~  368 (412)
                       +.++.+++--.++.+...+.++.+|+++||+++|..++.++....+...++....
T Consensus       105 -~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~g~~ig~~l~g~l~  159 (400)
T PRK11646        105 -SCILSGLGGTLFDPPRTALVIKLIRPHQRGRFFSLLMMQDSAGAVIGALLGSWLL  159 (400)
T ss_pred             -HHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence             1122222332356677788889999999999999999999886666655554443

>TIGR00881 2A0104 phosphoglycerate transporter family protein

Probab=98.17  E-value=2e-05  Score=77.51  Aligned_cols=123  Identities=11%  Similarity=-0.058  Sum_probs=85.2

Q ss_pred             cchHHHHHHHhcCCCCchhHHHhhHHHHHHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHHhcCCCcCcchHH
Q 015168          230 PGSLMTAFLTQRGLNPSIIGGFSGLCASMGVAATFLSAYLVRRLGILKAGAAGLIFQASLLAMAVAVYWSGSLSQQNPLL  309 (412)
Q Consensus       230 ~~~~~~~y~~~~gls~~~~G~~~~~~avggllGt~l~~~l~~R~g~~r~~~~~~~~~~~~l~~~v~~~~~g~~~~~~~~~  309 (412)
                      +....+.+.+++|+|+.+.|++.+...++..++....+++.+|+|+++...++.....++....  .+.. +    ..  
T Consensus        14 ~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~--~~~~-~----~~--   84 (379)
T TIGR00881        14 FALAMPYLVEEIGLSKTDLGLLLSSFSIAYGISKFVMGSVSDRSNPRVFLPIGLILCAIVNLFF--GFST-S----LW--   84 (379)
T ss_pred             hhhhhHHHHHHhCCCHhHHHHHHHHHHHHHHhhhhhhhHHHHhhCCeehhHHHHHHHHHHHHHH--HHhh-h----HH--
Confidence            3333444456789999999999999999999999999999999999998887765433322221  2211 1    11  


Q ss_pred             HHHHHHHHhhhhhhhhhhhhhHHhhccCCcccchhHHHHHHHHHHHHHHHHH
Q 015168          310 FFLCLIVLSRLGHMSYDIVGAQILQTGIPSSKANLIGTTEISVASLVESVML  361 (412)
Q Consensus       310 l~~~g~~~sr~GLw~~dl~~~~l~Q~~vp~~~~G~v~g~~~sl~~~~~ll~~  361 (412)
                      .+..+.++.+++.-........+..+..|+++||++.+..++.+.....+..
T Consensus        85 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~  136 (379)
T TIGR00881        85 VMAALWALNGIFQGMGWPPCGRTVTKWFSRSERGTWVSFWNCSHNVGGGLLP  136 (379)
T ss_pred             HHHHHHHHHHhhccccCCchHHHHHHhcCHhhheeeEeehhccchhHHHHHH
Confidence            1111222223333335566777888999999999999999888887665555

>PRK12382 putative transporter; Provisional

Probab=98.16  E-value=0.0001  Score=74.05  Aligned_cols=134  Identities=7%  Similarity=0.001  Sum_probs=85.2

Q ss_pred             hHHHHHHH-hcCCCCchhHHHhhHHHHHHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHH-HHhcCCCcCcchHH
Q 015168          232 SLMTAFLT-QRGLNPSIIGGFSGLCASMGVAATFLSAYLVRRLGILKAGAAGLIFQASLLAMAVA-VYWSGSLSQQNPLL  309 (412)
Q Consensus       232 ~~~~~y~~-~~gls~~~~G~~~~~~avggllGt~l~~~l~~R~g~~r~~~~~~~~~~~~l~~~v~-~~~~g~~~~~~~~~  309 (412)
                      ...+.|+. ++|+|+.++|++.+...++..++....+++.+|+|++|....+............. ...+..  ......
T Consensus        36 p~l~~~l~~~lg~s~~~~g~~~s~~~~~~~i~~~~~G~l~Dr~g~r~~l~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~  113 (392)
T PRK12382         36 PVIPLFVHHDLGFGNTMVGIAVGIQFLATVLTRGYAGRLADQYGAKRSALQGMLACGLAGLAYLLAAILPVS--APFKFA  113 (392)
T ss_pred             hhhhHHHHHhcCCcHHHHHHHHHHHHHHHHHHhhhhhHHHHhhcchHHHHHHHHHHHHHHHHHHhhhccccc--hhHHHH
Confidence            34556764 68999999999999999999999999999999999999888776533222111111 111110  001111


Q ss_pred             HHHHHHHHhhhhhhhhhhhhhHHhhccCCcccchhHHHHHHHHHHHHHHHHHHHHHhc
Q 015168          310 FFLCLIVLSRLGHMSYDIVGAQILQTGIPSSKANLIGTTEISVASLVESVMLGVAIIA  367 (412)
Q Consensus       310 l~~~g~~~sr~GLw~~dl~~~~l~Q~~vp~~~~G~v~g~~~sl~~~~~ll~~~~~~~~  367 (412)
                      .+..+-.+.++|--.+..+.....++.+|+++||++.+..+...++...+...++...
T Consensus       114 ~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~r~~a~~~~~~~~~~g~~~g~~~~~~l  171 (392)
T PRK12382        114 LLVVGRLILGFGESQLLTGALTWGLGLVGPKHSGKVMSWNGMAMYGALAAGAPLGLLL  171 (392)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHhhCCccccchhhhHHHHHHHHHHHHHHHHHHHH
Confidence            1212222233333223445556777889999999999998777766555555554443

>PRK10473 multidrug efflux system protein MdtL; Provisional

Probab=98.15  E-value=0.00017  Score=72.35  Aligned_cols=128  Identities=9%  Similarity=0.029  Sum_probs=85.5

Q ss_pred             HHHHHHhcCCCCchhHHHhhHHHHHHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHHhcCCCcCcchHHHHHH
Q 015168          234 MTAFLTQRGLNPSIIGGFSGLCASMGVAATFLSAYLVRRLGILKAGAAGLIFQASLLAMAVAVYWSGSLSQQNPLLFFLC  313 (412)
Q Consensus       234 ~~~y~~~~gls~~~~G~~~~~~avggllGt~l~~~l~~R~g~~r~~~~~~~~~~~~l~~~v~~~~~g~~~~~~~~~l~~~  313 (412)
                      .+.+.+++|.|+.+.|+..+...++...+....+++.+|+|++|....+.....+....   .....+   ....   ..
T Consensus        26 lp~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~l~Dr~g~r~~l~~~~~~~~i~~~~---~~~~~~---~~~~---~~   96 (392)
T PRK10473         26 LPRIAADLNASEAQLHIAFSVYLAGMAAAMLFAGKIADRSGRKPVAIPGAALFIIASLL---CSLAET---SSLF---LA   96 (392)
T ss_pred             HHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhHhHHHHHhCChHHHHHHHHHHHHHHHH---HHHhCc---HHHH---HH
Confidence            33445679999999999999999999999999999999999998887665432222111   111111   1111   11


Q ss_pred             HHHHhhhhhhhhhhhhhHHhhccCCcccchhHHHHHHHHHHHHHHHHHHHHHhccCC
Q 015168          314 LIVLSRLGHMSYDIVGAQILQTGIPSSKANLIGTTEISVASLVESVMLGVAIIANDV  370 (412)
Q Consensus       314 g~~~sr~GLw~~dl~~~~l~Q~~vp~~~~G~v~g~~~sl~~~~~ll~~~~~~~~~~~  370 (412)
                      +-++.+++.-........+..+..|+++|+++.+..+...+....+...++....+.
T Consensus        97 ~~~l~g~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~i~~~~~~~i~~~l~~~  153 (392)
T PRK10473         97 GRFLQGIGAGCCYVVAFAILRDTLDDRRRAKVLSLLNGITCIIPVLAPVLGHLIMLK  153 (392)
T ss_pred             HHHHHHhhhhHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence            212223333234555667777888999999999999988877666666665554433

>PRK05122 major facilitator superfamily transporter; Provisional

Probab=98.15  E-value=5.1e-05  Score=76.32  Aligned_cols=131  Identities=12%  Similarity=-0.031  Sum_probs=86.3

Q ss_pred             HHHHHHH-hcCCCCchhHHHhhHHHHHHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHHhcCCCcCcchHHHH
Q 015168          233 LMTAFLT-QRGLNPSIIGGFSGLCASMGVAATFLSAYLVRRLGILKAGAAGLIFQASLLAMAVAVYWSGSLSQQNPLLFF  311 (412)
Q Consensus       233 ~~~~y~~-~~gls~~~~G~~~~~~avggllGt~l~~~l~~R~g~~r~~~~~~~~~~~~l~~~v~~~~~g~~~~~~~~~l~  311 (412)
                      ..+.|++ ++|.|+.++|+..++..++..++....+++.+|+|++|+...+..........+......+... ......+
T Consensus        37 ~l~~~i~~~~g~s~~~~g~~~~~~~~~~~i~~~~~G~l~Dr~g~r~~l~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~l  115 (399)
T PRK05122         37 VLPGYVHDQLGFSAFLAGLVISLQYLATLLSRPHAGRYADTLGPKKAVVFGLCGCALSGLLYLLAGLLAAWP-VLSLLLL  115 (399)
T ss_pred             HHHHHHHHhcCccHHHHHHHHHHHHHHHHHhchhhHhHHhccCCcchHHHHHHHHHHHHHHHHHhhhhhccc-hhHHHHH
Confidence            4556665 5899999999999999999999999999999999999998887654333222222221111100 1111122


Q ss_pred             HHHHHHhhhhhhhhhhhhhHHhhccCCcccchhHHHHHHHHHHHHHHHHHHHH
Q 015168          312 LCLIVLSRLGHMSYDIVGAQILQTGIPSSKANLIGTTEISVASLVESVMLGVA  364 (412)
Q Consensus       312 ~~g~~~sr~GLw~~dl~~~~l~Q~~vp~~~~G~v~g~~~sl~~~~~ll~~~~~  364 (412)
                      ..+-++.++|.-..+.+......+.+|+++||++++..+...++...+...++
T Consensus       116 ~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~l~  168 (399)
T PRK05122        116 LLGRLLLGIGESLAGTGSILWGIGRVGALHTGRVISWNGIATYGALAIGAPLG  168 (399)
T ss_pred             HHHHHHHHhhHHhhcchHHHHHHhhcChhhhccchhhhhhhhhHHHHHHHHHH
Confidence            22222333444345666677778888999999999998777776554444443

>PRK03633 putative MFS family transporter protein; Provisional

Probab=98.12  E-value=0.0002  Score=71.88  Aligned_cols=131  Identities=15%  Similarity=0.050  Sum_probs=85.6

Q ss_pred             cchHHHHHHHhcCCCCchhHHHhhHHHHHHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHHhcCCCcCcchHH
Q 015168          230 PGSLMTAFLTQRGLNPSIIGGFSGLCASMGVAATFLSAYLVRRLGILKAGAAGLIFQASLLAMAVAVYWSGSLSQQNPLL  309 (412)
Q Consensus       230 ~~~~~~~y~~~~gls~~~~G~~~~~~avggllGt~l~~~l~~R~g~~r~~~~~~~~~~~~l~~~v~~~~~g~~~~~~~~~  309 (412)
                      .....+.|.+++|.|+.++|+..+...++..+++...+++.+|+|++|....+..........+  .. .++    ...+
T Consensus        25 ~~~~lp~~~~~~~~s~~~~G~~~s~~~l~~~~~~~~~g~l~dr~g~k~~~~~~~~~~~~~~~~~--~~-~~~----~~~l   97 (381)
T PRK03633         25 LNTLVPLWLAQEHLPTWQVGVVSSSYFTGNLVGTLLAGYVIKRIGFNRSYYLASLIFAAGCAGL--GL-MVG----FWSW   97 (381)
T ss_pred             HHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HH-hcc----HHHH
Confidence            3456777888999999999999999999999999999999999999998877665432221111  21 111    1111


Q ss_pred             HHHHHHHHhhhhhhhhhhhhhHHhhccCCcccchhHHHHHHHHHHHHHHHHHHHHHhccC
Q 015168          310 FFLCLIVLSRLGHMSYDIVGAQILQTGIPSSKANLIGTTEISVASLVESVMLGVAIIAND  369 (412)
Q Consensus       310 l~~~g~~~sr~GLw~~dl~~~~l~Q~~vp~~~~G~v~g~~~sl~~~~~ll~~~~~~~~~~  369 (412)
                      +  .+-++.+++.-..-........+..|+++||++.+...+..+....+...++....+
T Consensus        98 ~--~~~~l~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~l~~  155 (381)
T PRK03633         98 L--AWRFVAGIGCAMIWVVVESALMCSGTSRNRGRLLAAYMMVYYLGTVLGQLLVSKVST  155 (381)
T ss_pred             H--HHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcccc
Confidence            1  111222222211222333444566788899999999888887766666666555443

>PRK10054 putative transporter; Provisional

Probab=98.11  E-value=0.00021  Score=72.40  Aligned_cols=126  Identities=13%  Similarity=0.122  Sum_probs=85.4

Q ss_pred             HHHHHHH-hcCCCCchhHHHhhHHHHHHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHHhcCCCcCcchHHHH
Q 015168          233 LMTAFLT-QRGLNPSIIGGFSGLCASMGVAATFLSAYLVRRLGILKAGAAGLIFQASLLAMAVAVYWSGSLSQQNPLLFF  311 (412)
Q Consensus       233 ~~~~y~~-~~gls~~~~G~~~~~~avggllGt~l~~~l~~R~g~~r~~~~~~~~~~~~l~~~v~~~~~g~~~~~~~~~l~  311 (412)
                      .+..|++ ++|+|+.+.|+..+...++++++....+++.+|+|+++...++.....+..+.  ..+.+ +    ....+.
T Consensus        29 ~l~~~l~~~~g~s~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~g~k~~~~~~~~~~~~~~~~--~~~~~-~----~~~~~~  101 (395)
T PRK10054         29 FMTIYLSRQYSLSVDLIGYAMTIALTIGVVFSLGFGILADKFDKKRYMLLAITAFASGFIA--IPLVN-N----VTLVVL  101 (395)
T ss_pred             HHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCcchhHHHHHHHHHHHHHH--HHHHh-H----HHHHHH
Confidence            4566775 58999999999999999999999999999999999998887766543222111  12221 1    111111


Q ss_pred             HHHHHHhhhhhhhhhhhhhHHhhccCCcccchhHHHHHHHHHHHHHHHHHHHHHhc
Q 015168          312 LCLIVLSRLGHMSYDIVGAQILQTGIPSSKANLIGTTEISVASLVESVMLGVAIIA  367 (412)
Q Consensus       312 ~~g~~~sr~GLw~~dl~~~~l~Q~~vp~~~~G~v~g~~~sl~~~~~ll~~~~~~~~  367 (412)
                      ...+.  ..+...+..+......+.+|+++||++.|..++..+....+...++...
T Consensus       102 ~~~~~--g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~lg~~igp~l~~~l  155 (395)
T PRK10054        102 FFALI--NCAYSVFSTVLKAWFADNLSSTSKTKIFSLNYTMLNIGWTVGPPLGTLL  155 (395)
T ss_pred             HHHHH--HHHHHHHHHHHHHHHHHhcCHhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            11111  1122235556677778888999999999999999888666555555444

>TIGR00711 efflux_EmrB drug resistance transporter, EmrB/QacA subfamily

Probab=98.11  E-value=0.00012  Score=75.51  Aligned_cols=128  Identities=9%  Similarity=-0.055  Sum_probs=89.7

Q ss_pred             HHHHHHhcCCCCchhHHHhhHHHHHHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHHhcCCCcCcchHHHHHH
Q 015168          234 MTAFLTQRGLNPSIIGGFSGLCASMGVAATFLSAYLVRRLGILKAGAAGLIFQASLLAMAVAVYWSGSLSQQNPLLFFLC  313 (412)
Q Consensus       234 ~~~y~~~~gls~~~~G~~~~~~avggllGt~l~~~l~~R~g~~r~~~~~~~~~~~~l~~~v~~~~~g~~~~~~~~~l~~~  313 (412)
                      .+.+.+++|.++...|+..+...++.+++..+.+++.+|+|++|...++.....+....+  .... +    ..  .+..
T Consensus        25 ~p~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~--~~~~-~----~~--~l~~   95 (485)
T TIGR00711        25 IPTIAGDLGSSLSQVQWVITSYMLANAISIPLTGWLAKRFGTRRLFLISTFAFTLGSLLC--GVAP-N----LE--LMII   95 (485)
T ss_pred             HHHHHHhcCCChhhhhHHHHHHHHHHHHHHHhHHHHHHHhCcHHHHHHHHHHHHHHHHHH--hCcC-C----HH--HHHH
Confidence            445566799999999999999999999999999999999999998887765433222221  1111 1    11  1112


Q ss_pred             HHHHhhhhhhhhhhhhhHHhhccCCcccchhHHHHHHHHHHHHHHHHHHHHHhccCC
Q 015168          314 LIVLSRLGHMSYDIVGAQILQTGIPSSKANLIGTTEISVASLVESVMLGVAIIANDV  370 (412)
Q Consensus       314 g~~~sr~GLw~~dl~~~~l~Q~~vp~~~~G~v~g~~~sl~~~~~ll~~~~~~~~~~~  370 (412)
                      +-+..++|.-........+..+..|+++||++.+...+.......+...++....+.
T Consensus        96 ~~~~~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~  152 (485)
T TIGR00711        96 FRVIQGFGGGPLIPLSFSTLLNIYPPEKRGRAMAIWGLTVLVAPALGPTLGGWIIEN  152 (485)
T ss_pred             HHHHHHhhhhhHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHhhhhhccHhHhccC
Confidence            333334444345667778888999999999999999888887666666665555443

This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 14 potential membrane-spanning regions. Members with known activities include EmrB (multiple drug resistance efflux pump) in E. coli, FarB (antibacterial fatty acid resistance) in Neisseria gonorrhoeae, TcmA (tetracenomycin C resistance) in Streptomyces glaucescens, etc. In most cases, the efflux pump is described as having a second component encoded in the same operon, such as EmrA of E. coli.

>TIGR02332 HpaX 4-hydroxyphenylacetate permease

Probab=98.02  E-value=0.00017  Score=73.38  Aligned_cols=117  Identities=13%  Similarity=0.086  Sum_probs=79.0

Q ss_pred             HhcCCCCchhHHHhhHHHHHHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHHhcCCCcCcchHHHHHHHHHHh
Q 015168          239 TQRGLNPSIIGGFSGLCASMGVAATFLSAYLVRRLGILKAGAAGLIFQASLLAMAVAVYWSGSLSQQNPLLFFLCLIVLS  318 (412)
Q Consensus       239 ~~~gls~~~~G~~~~~~avggllGt~l~~~l~~R~g~~r~~~~~~~~~~~~l~~~v~~~~~g~~~~~~~~~l~~~g~~~s  318 (412)
                      +++|+++.++|+..+...++..++.+..+++.+|+|++|....+.....+....+  .+..+.    ..+++   +-++.
T Consensus        36 ~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~G~r~~~~~~~~~~~~~~~~~--~~~~~~----~~l~~---~r~l~  106 (412)
T TIGR02332        36 KDLGLSATMFGLAATLFYAAYVICGIPSNIMLAIIGARRWIAGIMVLWGIASTAT--MFATGP----ESLYL---LRILV  106 (412)
T ss_pred             hhcCCCHHHHHHHHHHHHHHHHHHHhhHHHHHHHhChHHHHHHHHHHHHHHHHHH--HHhcCH----HHHHH---HHHHH
Confidence            5789999999999999999999999999999999999998877665433222221  222211    11111   11112


Q ss_pred             hhhhhhhhhhhhHHhhccCCcccchhHHHHHHHHHHHHHHHHHHHH
Q 015168          319 RLGHMSYDIVGAQILQTGIPSSKANLIGTTEISVASLVESVMLGVA  364 (412)
Q Consensus       319 r~GLw~~dl~~~~l~Q~~vp~~~~G~v~g~~~sl~~~~~ll~~~~~  364 (412)
                      ++|.-.+-.+...+.+|..|+++||++.+...+.......+...++
T Consensus       107 G~~~~~~~~~~~~~~~~~~~~~~rg~~~~~~~~~~~~g~~~~~~~~  152 (412)
T TIGR02332       107 GIAEAGFLPGILLYLTFWFPAYFRARANALFMIAMPVTMALGLILS  152 (412)
T ss_pred             HHHHhhHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            2233223345556789999999999999999887776554444443

This protein is a part of the Major Facilitator Superfamily (Pfam family pfam07690). Member of this family are found in a number of proteobacterial genomes, but only in the context of having genes for 4-hydroxyphenylacetate (4-HPA) degradation. The protein is characterized by Prieto, et al. (PubMed:9315705) as 4-hydroxyphenylacetate permease in E. coli, where 3-HPA and 3,4-dihydroxyphenylacetate are shown to competitively inhibit 4-HPA transport and therefore also interact specificially.

>PRK03545 putative arabinose transporter; Provisional

Probab=98.02  E-value=0.00024  Score=71.46  Aligned_cols=125  Identities=10%  Similarity=0.005  Sum_probs=83.0

Q ss_pred             HHHHHHhcCCCCchhHHHhhHHHHHHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHHhcCCCcCcchHHHHHH
Q 015168          234 MTAFLTQRGLNPSIIGGFSGLCASMGVAATFLSAYLVRRLGILKAGAAGLIFQASLLAMAVAVYWSGSLSQQNPLLFFLC  313 (412)
Q Consensus       234 ~~~y~~~~gls~~~~G~~~~~~avggllGt~l~~~l~~R~g~~r~~~~~~~~~~~~l~~~v~~~~~g~~~~~~~~~l~~~  313 (412)
                      ...+.+++|+|+.+.|+..+...++..++....+++.+|+|++|....+.....+....+  .+.+ +   ....++   
T Consensus        32 ~~~l~~~~~~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~--~~~~-~---~~~l~~---  102 (390)
T PRK03545         32 LSDIAQSFHMQTAQVGLMLTIYAWVVALMSLPLMLLTSNVERRKLLIGLFVLFIASHVLS--ALAW-N---FTVLLI---  102 (390)
T ss_pred             hHHHHhHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHcCCChHHHHHHHHHHHHHHHHHH--HHhc-c---HHHHHH---
Confidence            345567899999999999999999999999999999999999998887765322222221  2211 1   111111   


Q ss_pred             HHHHhhhhhhhhhhhhhHHhhccCCcccchhHHHHHHHHHHHHHHHHHHHHHhc
Q 015168          314 LIVLSRLGHMSYDIVGAQILQTGIPSSKANLIGTTEISVASLVESVMLGVAIIA  367 (412)
Q Consensus       314 g~~~sr~GLw~~dl~~~~l~Q~~vp~~~~G~v~g~~~sl~~~~~ll~~~~~~~~  367 (412)
                      +-++.+++--.+......+..+..|+++||++.|..+..+.....+...++...
T Consensus       103 ~r~~~G~~~~~~~~~~~~~i~~~~~~~~r~~~~g~~~~~~~~g~~ig~~l~~~l  156 (390)
T PRK03545        103 SRIGIAFAHAIFWSITASLAIRVAPAGKKAQALSLLATGTALAMVLGLPLGRVI  156 (390)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHhCChhhhhhHHHHHHHHHHHHHHHHhhHHHHH
Confidence            111122222123344556667788999999999999888887666655555443

>TIGR00885 fucP L-fucose:H+ symporter permease

Probab=98.01  E-value=0.0003  Score=71.75  Aligned_cols=125  Identities=12%  Similarity=-0.030  Sum_probs=89.5

Q ss_pred             HHHHHHHhcCCCCchhHHHhhHHHHHHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHHhcCCCcCcchHHHHH
Q 015168          233 LMTAFLTQRGLNPSIIGGFSGLCASMGVAATFLSAYLVRRLGILKAGAAGLIFQASLLAMAVAVYWSGSLSQQNPLLFFL  312 (412)
Q Consensus       233 ~~~~y~~~~gls~~~~G~~~~~~avggllGt~l~~~l~~R~g~~r~~~~~~~~~~~~l~~~v~~~~~g~~~~~~~~~l~~  312 (412)
                      +.+.+.++.|+|+.+.|++.+...++.++++...+++.+|+|++|+...+.....+...... .....     .....+.
T Consensus        25 l~~~~~~~~~~s~~~~g~l~s~~~~g~~i~~~~~g~l~~r~G~r~~~~~g~~l~~~g~~l~~-~~~~~-----~~~~~~l   98 (410)
T TIGR00885        25 MVPQFQQAFTLTAFQAALVQSAFYGGYFIMAIPAAIFMKKLSYKAGILLGLFLYALGAFLFW-PAAEI-----MNYTLFL   98 (410)
T ss_pred             HHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHH-HHHhh-----ccHHHHH
Confidence            44445567899999999999999999999999999999999999998888764333222211 11100     1122233


Q ss_pred             HHHHHhhhhhhhhhhhhhHHhhccCCcccchhHHHHHHHHHHHHHHHHHHH
Q 015168          313 CLIVLSRLGHMSYDIVGAQILQTGIPSSKANLIGTTEISVASLVESVMLGV  363 (412)
Q Consensus       313 ~g~~~sr~GLw~~dl~~~~l~Q~~vp~~~~G~v~g~~~sl~~~~~ll~~~~  363 (412)
                      .+.+..+.|.-..+.+.+...++..|++++++..+..++.++.-..+...+
T Consensus        99 ~~~~l~G~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lG~~~g~~i  149 (410)
T TIGR00885        99 VGLFILTAGLGFLETAANPYILVMGPESTATRRLNLAQSFNPFGSIIGMVV  149 (410)
T ss_pred             HHHHHHHhhHHHHHhhhhHHHHHHCCHhHHHHHHHHHHHHHHHHHHHHHHH
Confidence            344445666666888888888888899999999999888888755555444

This family describes the L-fucose permease in bacteria. L-fucose(6-deoxy-L-galactose) is a monosaccharide found in glycoproteins and cell wall polysaccharides. L-fucose is used in bacteria through an inducible pathway mediated by atleast four enzymes: a permease, isomerase, kinase and an aldolase which are encoded by fucP, fucI, fucK, fucA respectively. The fuc genes belong to a regulon comprising of four linked operons: fucO, fucA, fucPIK and fucR. The positive regulator is encoded by fucR, whose protein responds to fuculose-1-phosphate, which acts as an effector.

>TIGR00891 2A0112 putative sialic acid transporter

Probab=98.01  E-value=0.00032  Score=69.88  Aligned_cols=124  Identities=10%  Similarity=-0.011  Sum_probs=83.5

Q ss_pred             HHHHHHhcCCCCchhHHHhhHHHHHHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHHhcCCCcCcchHHHHHH
Q 015168          234 MTAFLTQRGLNPSIIGGFSGLCASMGVAATFLSAYLVRRLGILKAGAAGLIFQASLLAMAVAVYWSGSLSQQNPLLFFLC  313 (412)
Q Consensus       234 ~~~y~~~~gls~~~~G~~~~~~avggllGt~l~~~l~~R~g~~r~~~~~~~~~~~~l~~~v~~~~~g~~~~~~~~~l~~~  313 (412)
                      .+.+.+++|+|+.+.|++.+...++..++....+++.+|+|+++...++.....+....+  .+.. +    ...++  .
T Consensus        35 ~~~l~~~~~~s~~~~g~~~~~~~~~~~~~~~~~G~l~Dr~g~r~~~~~~~~~~~~~~~~~--~~~~-~----~~~l~--~  105 (405)
T TIGR00891        35 LAEVAGEFGLTTVDAASLISAALISRWFGALMFGLWGDRYGRRLPMVTSIVLFSAGTLAC--GFAP-G----YITMF--I  105 (405)
T ss_pred             HHHHHHHhCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHH--HHhc-c----HHHHH--H
Confidence            444556799999999999999999999999999999999999998887654332222211  2211 1    11111  1


Q ss_pred             HHHHhhhhhhhhhhhhhHHhhccCCcccchhHHHHHHHHHHHHHHHHHHHHHh
Q 015168          314 LIVLSRLGHMSYDIVGAQILQTGIPSSKANLIGTTEISVASLVESVMLGVAII  366 (412)
Q Consensus       314 g~~~sr~GLw~~dl~~~~l~Q~~vp~~~~G~v~g~~~sl~~~~~ll~~~~~~~  366 (412)
                      +-++.++|.-..+.....+.-|..|+++||++++..++.......+...+...
T Consensus       106 ~~~l~G~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~~~  158 (405)
T TIGR00891       106 ARLVIGIGMGGEYGSSAAYVIESWPKHLRNKASGLLISGYAVGAVVAAQVYSL  158 (405)
T ss_pred             HHHHHHhhhhhhhHHHHHHHHHhCChhhhhHHHHHHHHHHHHHHHHHHHHHHH
Confidence            22222334333556666777788899999999999988877655555544433

>PRK11652 emrD multidrug resistance protein D; Provisional

Probab=98.01  E-value=0.00049  Score=69.11  Aligned_cols=127  Identities=7%  Similarity=-0.025  Sum_probs=81.0

Q ss_pred             HHHHHHhcCCCCchhHHHhhHHHHHHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHHhcCCCcCcchHHHHHH
Q 015168          234 MTAFLTQRGLNPSIIGGFSGLCASMGVAATFLSAYLVRRLGILKAGAAGLIFQASLLAMAVAVYWSGSLSQQNPLLFFLC  313 (412)
Q Consensus       234 ~~~y~~~~gls~~~~G~~~~~~avggllGt~l~~~l~~R~g~~r~~~~~~~~~~~~l~~~v~~~~~g~~~~~~~~~l~~~  313 (412)
                      .+.+.+++|+|+.+.|+..+...++..++....+++.+|+|++|....+.....+....+  .+.+ +    ...++  .
T Consensus        31 ~~~i~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~l~Dr~grr~~~~~~~~~~~~~~~~~--~~~~-~----~~~l~--~  101 (394)
T PRK11652         31 IADMARDLNVREGAVQAVMAAYLLTYGLSQLFYGPLSDRVGRRPVILVGMSIFILGTLVA--LFAH-S----LTVLI--A  101 (394)
T ss_pred             HHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhhhhHHHhcCChHHHHHHHHHHHHHHHHH--HHHc-c----HHHHH--H
Confidence            455667899999999999999999999999999999999999998877655433222221  2211 1    11111  1


Q ss_pred             HHHHhhhhhhhhhhhhhHHhhccCCcccchhHHHHHHHHHHHHHHHHHHHHHhccC
Q 015168          314 LIVLSRLGHMSYDIVGAQILQTGIPSSKANLIGTTEISVASLVESVMLGVAIIAND  369 (412)
Q Consensus       314 g~~~sr~GLw~~dl~~~~l~Q~~vp~~~~G~v~g~~~sl~~~~~ll~~~~~~~~~~  369 (412)
                      +-+..+++.-........+..+..+++++++.++..+.-......+...+.....+
T Consensus       102 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~l~~  157 (394)
T PRK11652        102 ASAIQGLGTGVGGVMARTLPRDLYEGTQLRHANSLLNMGILVSPLLAPLIGGLLTT  157 (394)
T ss_pred             HHHHHHhhhhHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence            11111222212233344455566788899999998877777666665555544433

>cd06174 MFS The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters

Probab=98.00  E-value=0.00041  Score=67.18  Aligned_cols=132  Identities=15%  Similarity=0.070  Sum_probs=94.1

Q ss_pred             cchHHHHHHHhcCCCCchhHHHhhHHHHHHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHHhcCCCcCcchHH
Q 015168          230 PGSLMTAFLTQRGLNPSIIGGFSGLCASMGVAATFLSAYLVRRLGILKAGAAGLIFQASLLAMAVAVYWSGSLSQQNPLL  309 (412)
Q Consensus       230 ~~~~~~~y~~~~gls~~~~G~~~~~~avggllGt~l~~~l~~R~g~~r~~~~~~~~~~~~l~~~v~~~~~g~~~~~~~~~  309 (412)
                      .....+.|.+++|.++.+.|+..+...++.+.+....+++.+|+|++|...++...........  .. ..+    .  .
T Consensus        18 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~d~~g~r~~~~~~~~~~~~~~~~~--~~-~~~----~--~   88 (352)
T cd06174          18 LSPALPLLAEDLGLSASQAGLIVSAFSLGYALGSLLAGYLSDRFGRRRVLLLGLLLFALGSLLL--AF-ASS----L--W   88 (352)
T ss_pred             hHhhHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHhCCchhhHHHHHHHHHHHHHH--HH-hcc----H--H
Confidence            3445667788899999999999999999999999999999999999998777766443332222  11 111    1  1


Q ss_pred             HHHHHHHHhhhhhhhhhhhhhHHhhccCCcccchhHHHHHHHHHHHHHHHHHHHHHhccCC
Q 015168          310 FFLCLIVLSRLGHMSYDIVGAQILQTGIPSSKANLIGTTEISVASLVESVMLGVAIIANDV  370 (412)
Q Consensus       310 l~~~g~~~sr~GLw~~dl~~~~l~Q~~vp~~~~G~v~g~~~sl~~~~~ll~~~~~~~~~~~  370 (412)
                      .+..+..+.+++.-........+..+..|+++|+++++...........+.........+.
T Consensus        89 ~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~  149 (352)
T cd06174          89 LLLVGRFLLGLGGGALYPAAAALIAEWFPPKERGRALGLFSAGFGLGALLGPLLGGLLAES  149 (352)
T ss_pred             HHHHHHHHHHcccccccHhHHHHHHHhCCccchhhhhhHHHHHHHHHHHHHHHHHHHHHHH
Confidence            1112223334444446677888899999999999999999988888766666665555443

MFS proteins facilitate the transport across cytoplasmic or internal membranes of a variety of substrates including ions, sugar phosphates, drugs, neurotransmitters, nucleosides, amino acids, and peptides. They do so using the electrochemical potential of the transported substrates. Uniporters transport a single substrate, while symporters and antiporters transport two substrates in the same or in opposite directions, respectively, across membranes. MFS proteins are typically 400 to 600 amino acids in length, and the majority contain 12 transmembrane alpha helices (TMs) connected by hydrophilic loops. The N- and C-terminal halves of these proteins display weak similarity and may be the result of a gene duplication/fusion event. Based on kinetic studies and the structures of a few bacterial superfamily members, GlpT (glycerol-3

>TIGR00880 2_A_01_02 Multidrug resistance protein

Probab=97.99  E-value=0.00022  Score=59.36  Aligned_cols=121  Identities=19%  Similarity=0.110  Sum_probs=77.6

Q ss_pred             HHHHHHhhhhhcchhccCCcHHHHHHHHHHHHHHHHHHHHHHHHHhccccccccchhHHHHHHHHHHHHHHHHHhhhhhh
Q 015168            6 KLILIVGGPLVGKLMDHSPRIPAYICLNTVQAAAQLLSAAMIIHAHTVIPTSSSMLLHPWFFVLVLAGAVERLTGVALGV   85 (412)
Q Consensus         6 ~lp~ll~g~~~G~~vDr~~R~~v~~~~~~~q~~~v~~s~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~l~~~a~~~   85 (412)
                      .+..++.++..|.+.||++||+.+..+.........      ...... +     . +..++..++.|............
T Consensus         8 ~~~~~~~~~~~g~~~d~~g~~~~~~~~~~~~~~~~~------~~~~~~-~-----~-~~~~~~~~~~g~~~~~~~~~~~~   74 (141)
T TIGR00880         8 ALGQLIYSPLSGLLTDRFGRKPVLLVGLFIFVLSTA------MFALSS-N-----I-TVLIIARFLQGFGAAFALVAGAA   74 (141)
T ss_pred             hhHHHHHHhhHHHHHhhcchhHHHHHHHHHHHHHHH------HHHHhc-c-----H-HHHHHHHHHHHHHHHHHHHhHHH
Confidence            456778899999999999999998777554332211      111111 1     1 22333344455444433333222


Q ss_pred             hhcccceeeecCCCchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhcChhHHHHHHHHHHH
Q 015168           86 AVERDWAVLLAGINRPIALAKANAVLNRIDLLCEIAGASLFGILLSKYEPVTCLKFAAGLIM  147 (412)
Q Consensus        86 ai~RDwv~~l~~~~~~~~L~~~Ns~l~~id~v~~llgP~lgG~L~~~~~~~~~~~~~~~~~~  147 (412)
                       ...|    .++++   +..+.++..+....++..++|.++|.+.+..+|+..+.+......
T Consensus        75 -~~~~----~~~~~---~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  128 (141)
T TIGR00880        75 -LIAD----IYPPE---ERGVALGLMSAGIALGPLLGPPLGGVLAQFLGWRAPFLFLAILAL  128 (141)
T ss_pred             -HHHH----HCChh---hhhHHHHHHHHhHHHHHHHhHHhHHHHhcccchHHHHHHHHHHHH
Confidence             2223    55543   688999999999999999999999999998898877665443333

>PRK10504 putative transporter; Provisional

Probab=97.99  E-value=0.00045  Score=71.17  Aligned_cols=130  Identities=11%  Similarity=-0.007  Sum_probs=85.2

Q ss_pred             chHHHHHHHhcCCCCchhHHHhhHHHHHHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHHhcCCCcCcchHHH
Q 015168          231 GSLMTAFLTQRGLNPSIIGGFSGLCASMGVAATFLSAYLVRRLGILKAGAAGLIFQASLLAMAVAVYWSGSLSQQNPLLF  310 (412)
Q Consensus       231 ~~~~~~y~~~~gls~~~~G~~~~~~avggllGt~l~~~l~~R~g~~r~~~~~~~~~~~~l~~~v~~~~~g~~~~~~~~~l  310 (412)
                      ....+.|.+++|.|+...|+..+...++...+..+.+++.+|+|++|....+......+...+  .+.. +    ...++
T Consensus        30 ~~~~p~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~r~~~~~~~~~~~~~~~~~--~~~~-~----~~~l~  102 (471)
T PRK10504         30 NTALPSMAQSLGESPLHMHMVIVSYVLTVAVMLPASGWLADRVGVRNIFFTAIVLFTLGSLFC--ALSG-T----LNELL  102 (471)
T ss_pred             HHHHHHHHHHhCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhchHHHHHHHHHHHHHHHHHH--HHhC-C----HHHHH
Confidence            344667778899999999999999999999999999999999999998876654332222221  2111 1    11111


Q ss_pred             HHHHHHHhhhhhhhhhhhhhHHhhccCCcccchhHHHHHHHHHHHHHHHHHHHHHhccC
Q 015168          311 FLCLIVLSRLGHMSYDIVGAQILQTGIPSSKANLIGTTEISVASLVESVMLGVAIIAND  369 (412)
Q Consensus       311 ~~~g~~~sr~GLw~~dl~~~~l~Q~~vp~~~~G~v~g~~~sl~~~~~ll~~~~~~~~~~  369 (412)
                        .+.++.++|.-..-.......++..|+++||++.|..+...+....+...++....+
T Consensus       103 --~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~g~l~~  159 (471)
T PRK10504        103 --LARVLQGVGGAMMVPVGRLTVMKIVPREQYMAAMTFVTLPGQVGPLLGPALGGLLVE  159 (471)
T ss_pred             --HHHHHHHhhhHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHh
Confidence              112222333222223445556778899999999999998888766555555544433

>PRK03699 putative transporter; Provisional

Probab=97.98  E-value=0.00048  Score=69.47  Aligned_cols=126  Identities=14%  Similarity=0.094  Sum_probs=79.7

Q ss_pred             ccchHHHHHHHhcCCCCchhHHHhhHHHHHHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHHhcCCCcCcchH
Q 015168          229 TPGSLMTAFLTQRGLNPSIIGGFSGLCASMGVAATFLSAYLVRRLGILKAGAAGLIFQASLLAMAVAVYWSGSLSQQNPL  308 (412)
Q Consensus       229 ~~~~~~~~y~~~~gls~~~~G~~~~~~avggllGt~l~~~l~~R~g~~r~~~~~~~~~~~~l~~~v~~~~~g~~~~~~~~  308 (412)
                      .++...+.+.+++|+|+++.|+..+...++..+|..+.+++.+|+|++|...++.....+.....  .+.. +.. ....
T Consensus        25 ~~g~~~~~i~~~~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~dr~g~r~~~~~~~~~~~i~~~l~--~~~~-~~~-~~~~  100 (394)
T PRK03699         25 VTGMVMGPIAEYFNLPVSSMSNTFTFLNAGILISIFLNAWLMEIIPLKRQLIFGFALMILAVAGL--MFSH-SLA-LFSI  100 (394)
T ss_pred             HHhhhhHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHH--HHcc-hHH-HHHH
Confidence            34445666677899999999999999999999999999999999999998877765432222211  2211 100 0011


Q ss_pred             HHHHHHHHHhhhhhhhhhhhhhHHhhccCCcccchhHHHHHHHHHHHHHHHHHHH
Q 015168          309 LFFLCLIVLSRLGHMSYDIVGAQILQTGIPSSKANLIGTTEISVASLVESVMLGV  363 (412)
Q Consensus       309 ~l~~~g~~~sr~GLw~~dl~~~~l~Q~~vp~~~~G~v~g~~~sl~~~~~ll~~~~  363 (412)
                      ..++.|+.   .|.  ..........+..|+++||+..+..++.......+...+
T Consensus       101 ~~~l~G~~---~g~--~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~  150 (394)
T PRK03699        101 AMFVLGVV---SGI--TMSIGTFLITHVYEGKQRGSRLLFTDSFFSMAGMIFPII  150 (394)
T ss_pred             HHHHHHHh---hHh--hccchhHHhhhhcccchHHHHHHHHHHHHHHHHHHHHHH
Confidence            11222221   122  223344555666788999999988777665544444444

>PRK10213 nepI ribonucleoside transporter; Reviewed

Probab=97.98  E-value=0.00052  Score=69.46  Aligned_cols=126  Identities=11%  Similarity=0.083  Sum_probs=85.8

Q ss_pred             HHHHHHHhcCCCCchhHHHhhHHHHHHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHHhcCCCcCcchHHH--
Q 015168          233 LMTAFLTQRGLNPSIIGGFSGLCASMGVAATFLSAYLVRRLGILKAGAAGLIFQASLLAMAVAVYWSGSLSQQNPLLF--  310 (412)
Q Consensus       233 ~~~~y~~~~gls~~~~G~~~~~~avggllGt~l~~~l~~R~g~~r~~~~~~~~~~~~l~~~v~~~~~g~~~~~~~~~l--  310 (412)
                      ..+.+.+++|.|+++.|+..+...++..+++...+++.+|+|++|...++.....+....+  .... +   ....++  
T Consensus        42 ~l~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~Dr~grr~~~~~~~~~~~~~~~~~--~~~~-~---~~~l~~~r  115 (394)
T PRK10213         42 LLTPMAQDLGISEGVAGQSVTVTAFVAMFASLFITQTIQATDRRYVVILFAVLLTLSCLLV--SFAN-S---FSLLLIGR  115 (394)
T ss_pred             hHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcccCcHHHHHHHHHHHHHHHHHH--HHHC-h---HHHHHHHH
Confidence            3455667899999999999999999999999999999999999999887776543322221  2211 1   111111  


Q ss_pred             HHHHHHHhhhhhhhhhhhhhHHhhccCCcccchhHHHHHHHHHHHHHHHHHHHHHhccC
Q 015168          311 FLCLIVLSRLGHMSYDIVGAQILQTGIPSSKANLIGTTEISVASLVESVMLGVAIIAND  369 (412)
Q Consensus       311 ~~~g~~~sr~GLw~~dl~~~~l~Q~~vp~~~~G~v~g~~~sl~~~~~ll~~~~~~~~~~  369 (412)
                      ++.|+..   |.  .-.....+..+..|+++||++++...+..+....+...++....+
T Consensus       116 ~l~G~~~---g~--~~~~~~~~i~~~~~~~~~~~a~~~~~~~~~~g~~ig~~l~~~l~~  169 (394)
T PRK10213        116 ACLGLAL---GG--FWAMSASLTMRLVPPRTVPKALSVIFGAVSIALVIAAPLGSFLGE  169 (394)
T ss_pred             HHHHHhh---HH--HHHHHHHHHHHHcCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence            1222211   22  334455566788899999999999998887766555555554443

>TIGR00924 yjdL_sub1_fam amino acid/peptide transporter (Peptide:H+ symporter), bacterial

Probab=97.96  E-value=0.00035  Score=72.76  Aligned_cols=153  Identities=13%  Similarity=0.010  Sum_probs=91.0

Q ss_pred             chHHHHHHHh---cCCCCchhHHHhhHHHHHHHHHHHHHHHHHHH-hchhhHHHHHHHHHHHHHHHHHHHHhcCCCcCcc
Q 015168          231 GSLMTAFLTQ---RGLNPSIIGGFSGLCASMGVAATFLSAYLVRR-LGILKAGAAGLIFQASLLAMAVAVYWSGSLSQQN  306 (412)
Q Consensus       231 ~~~~~~y~~~---~gls~~~~G~~~~~~avggllGt~l~~~l~~R-~g~~r~~~~~~~~~~~~l~~~v~~~~~g~~~~~~  306 (412)
                      .+..+.|+++   +|+|+.+.|...+...+++.+++.+.+++.+| +|++|+..++.....+.....  .+ ...    .
T Consensus        30 ~~~L~~yl~~~~~lg~s~~~ag~~~~~~~~~~~~~~~~~G~laDr~~G~~~~l~~~~~~~~~g~~~~--~~-~~~----~  102 (475)
T TIGR00924        30 QGILAVYLVQQAGLGFSQEQAFIIFGAYSALVYLLTSVGWWFGDRVWGTKKTMVLGGIVLMLGHFML--AM-SIY----P  102 (475)
T ss_pred             HHHHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHhhHHHHHHhhcchHHHHHHHHHHHHHHHHHH--Hh-ccc----H
Confidence            3457778864   79999999999999999999999999999999 899999988876433222211  11 111    1


Q ss_pred             hHHHHHHHHHHhhhhhhhhhhhhhHHhhccCCcc---cchhHHHHHHHHHHHHHHHHHHHHHhccCCCchhHHHHHHHHH
Q 015168          307 PLLFFLCLIVLSRLGHMSYDIVGAQILQTGIPSS---KANLIGTTEISVASLVESVMLGVAIIANDVSHFGFLATLSLLS  383 (412)
Q Consensus       307 ~~~l~~~g~~~sr~GLw~~dl~~~~l~Q~~vp~~---~~G~v~g~~~sl~~~~~ll~~~~~~~~~~~~~f~~l~~~s~~~  383 (412)
                      ..+.  .+..+.++|--.+..+...+.-+..|++   +|+++.+..++..+.-..+...++....+...+.+...++...
T Consensus       103 ~~~~--~~~~l~g~g~g~~~~~~~~~~a~~~~~~~~~~r~~~~~~~~~~~niG~~ig~~l~g~l~~~~g~~~~f~~~~~~  180 (475)
T TIGR00924       103 DLIF--YGLGTIAVGSGLFKANPSSMVGKLYERGDMPRRDGGFTLFYMSINIGSFISPLLAGVIAENYGYHVGFNLAAVG  180 (475)
T ss_pred             hHHH--HHHHHHHhccccccCCHHHHHHHhcCCCCcccccceehhHHHHHHHHHHHHHHHHHHHHHhcChHHHHHHHHHH
Confidence            1111  1222222232223333333433334443   4888999888888876666666655444332344444443333


Q ss_pred             HHHHHHHHH
Q 015168          384 VVGAAWMFC  392 (412)
Q Consensus       384 v~~~~~~~~  392 (412)
                      ...+...|.
T Consensus       181 ~~~~~l~~~  189 (475)
T TIGR00924       181 MVIGLLTFF  189 (475)
T ss_pred             HHHHHHHHH
Confidence            333444443

The model describes proton-dependent oligopeptide transporters in bacteria. This model is restricted in its range in recognizing bacterial proton-dependent oligopeptide transporters, although they are found in yeast, plants and animals. They function by proton symport in a 1:1 stoichiometry, which is variable in different species. All of them are predicted to contain 12 transmembrane domains, for which limited experimental evidence exists.

>TIGR00712 glpT glycerol-3-phosphate transporter

Probab=97.93  E-value=0.00038  Score=71.33  Aligned_cols=121  Identities=12%  Similarity=0.042  Sum_probs=76.3

Q ss_pred             HHHHhcCCCCchhHHHhhHHHHHHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHHhcCCCcCcchHHHHHHHH
Q 015168          236 AFLTQRGLNPSIIGGFSGLCASMGVAATFLSAYLVRRLGILKAGAAGLIFQASLLAMAVAVYWSGSLSQQNPLLFFLCLI  315 (412)
Q Consensus       236 ~y~~~~gls~~~~G~~~~~~avggllGt~l~~~l~~R~g~~r~~~~~~~~~~~~l~~~v~~~~~g~~~~~~~~~l~~~g~  315 (412)
                      .|++++|+|+.++|+..+...++...+....+++.+|+|+++....+......+....  ...+..   ......+....
T Consensus        51 p~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~G~l~dr~g~~~~~~~~~~~~~~~~~~~--~~~~~~---~~~~~~l~~~~  125 (438)
T TIGR00712        51 PYLVEQGFSKGELGFALSAISIAYGFSKFIMGSVSDRSNPRVFLPAGLILSAAVMLLM--GFVPWA---TSSIAIMFVLL  125 (438)
T ss_pred             HHHHHcCCCHhHhHHHHHHHHHHHHHhhhccchhhhccCCceehHHHHHHHHHHHHHH--hccccc---cchHHHHHHHH
Confidence            3566679999999999999999999999999999999999887776654433222221  111100   01111111111


Q ss_pred             HHhhhhhhhhhhhhhHHhhccCCcccchhHHHHHHHHHHHHHHHHH
Q 015168          316 VLSRLGHMSYDIVGAQILQTGIPSSKANLIGTTEISVASLVESVML  361 (412)
Q Consensus       316 ~~sr~GLw~~dl~~~~l~Q~~vp~~~~G~v~g~~~sl~~~~~ll~~  361 (412)
                      .+.+++.-...........+..|+++||+++|..++..+....+..
T Consensus       126 ~l~g~~~g~~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~~g~~~~~  171 (438)
T TIGR00712       126 FLNGWFQGMGWPPCGRTMVHWWSQSERGTIVSIWNCAHNIGGGIPP  171 (438)
T ss_pred             HHHHHHhhcchHHHHHHHHHhcCcccchhHHHHHHHHHHhHhHHHH
Confidence            1122221112233444556778999999999999988887555443

This model describes a very hydrophobic protein, predicted to span the membrane at least 8 times. The two members confirmed experimentally as glycerol-3-phosphate transporters, from E. coli and B. subtilis, share more than 50 % amino acid identity. Proteins of the hexose phosphate and phosphoglycerate transport systems are also quite similar.

>TIGR00890 2A0111 Oxalate/Formate Antiporter

Probab=97.90  E-value=0.00068  Score=66.51  Aligned_cols=118  Identities=14%  Similarity=0.013  Sum_probs=73.0

Q ss_pred             hHHHHHHHhcCCCCchhHHHhhHHHHHHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHHhcCCCcCcchHHHH
Q 015168          232 SLMTAFLTQRGLNPSIIGGFSGLCASMGVAATFLSAYLVRRLGILKAGAAGLIFQASLLAMAVAVYWSGSLSQQNPLLFF  311 (412)
Q Consensus       232 ~~~~~y~~~~gls~~~~G~~~~~~avggllGt~l~~~l~~R~g~~r~~~~~~~~~~~~l~~~v~~~~~g~~~~~~~~~l~  311 (412)
                      ...+.+.+++|+|+.+.|+..++..++..++....+++.+|+|+++....+.....+....+  .+.+ +    ...++.
T Consensus        24 ~~~~~~~~~~~~s~~~~g~~~s~~~~~~~~~~~~~G~l~d~~G~r~~~~~~~~~~~~~~~~~--~~~~-~----~~~~~~   96 (377)
T TIGR00890        24 LLAPPLGRYFGVGVTAVAIWFTLLLIGLAMSMPVGGLLADKFGPRAVAMLGGILYGLGFTFY--AIAD-S----LAALYL   96 (377)
T ss_pred             hHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHhhhhHHHHHHcCccchhHHhHHHHHHHHHHH--HHHH-H----HHHHHH
Confidence            34444556799999999999999999999999999999999999999887665433222221  2211 1    111111


Q ss_pred             HHHHHHhhhhhhhhhhhhhHHhhccCCcccchhHHHHHHHHHHHHHHH
Q 015168          312 LCLIVLSRLGHMSYDIVGAQILQTGIPSSKANLIGTTEISVASLVESV  359 (412)
Q Consensus       312 ~~g~~~sr~GLw~~dl~~~~l~Q~~vp~~~~G~v~g~~~sl~~~~~ll  359 (412)
                        +-.+.++|.-....+.....++..| ++||++++...+.......+
T Consensus        97 --~~~~~g~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~g~~~  141 (377)
T TIGR00890        97 --TYGLASAGVGIAYGIALNTAVKWFP-DKRGLASGIIIGGYGLGSFI  141 (377)
T ss_pred             --HHHHHhHHHHHHHHhHHHHHHHHcC-cccHHHHHHHHHhcchhHhH
Confidence              1111222221111223334445444 67999999988877654433

>TIGR00806 rfc RFC reduced folate carrier

Probab=97.88  E-value=0.023  Score=58.95  Aligned_cols=110  Identities=12%  Similarity=-0.087  Sum_probs=76.4

Q ss_pred             hHHHHHHhhhhhcchhccCCcHHHHHHHHHHHHHHHHHHHHHHHHHhccccccccchhHHHHHHHHHHHHHHHHHhhhhh
Q 015168            5 SKLILIVGGPLVGKLMDHSPRIPAYICLNTVQAAAQLLSAAMIIHAHTVIPTSSSMLLHPWFFVLVLAGAVERLTGVALG   84 (412)
Q Consensus         5 ~~lp~ll~g~~~G~~vDr~~R~~v~~~~~~~q~~~v~~s~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~l~~~a~~   84 (412)
                      -+..++++-.++|.+.||.+-||++..+-+.-.+.    ..  +..+..     + . ..+.+.=++.|..+-..- +..
T Consensus        71 F~ysYal~qIp~GlLaDrlG~K~vL~l~~l~Wsl~----t~--L~~fa~-----S-l-~~L~i~R~llGvaEA~~~-A~~  136 (511)
T TIGR00806        71 LPYSHLAVLVPVFLLTDYLRYKPVLVLQALSFVCV----WL--LLLLGT-----S-V-WHMQLMEVFYSVTMAARI-AYS  136 (511)
T ss_pred             HHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHH----HH--HHHHHH-----H-H-HHHHHHHHHHHHHHHHHH-HHH
Confidence            35678899999999999999999987775433221    11  111211     0 1 244555567777776655 555


Q ss_pred             hhhcccceeeecCCCchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhcChhH
Q 015168           85 VAVERDWAVLLAGINRPIALAKANAVLNRIDLLCEIAGASLFGILLSKYEPVT  137 (412)
Q Consensus        85 ~ai~RDwv~~l~~~~~~~~L~~~Ns~l~~id~v~~llgP~lgG~L~~~~~~~~  137 (412)
                      ..+.+ |    ++++   +..++++..+....++++++|+++++ +..+||+.
T Consensus       137 syI~~-W----fP~k---ER~ratsi~~sg~~vG~~Ia~~L~ql-l~s~gWr~  180 (511)
T TIGR00806       137 SYIFS-L----VPPS---RYQRAAAYSRAAVLLGVFLSSVLGQL-LVTLGWIS  180 (511)
T ss_pred             HHHHH-H----CCHH---HHHHHHHHHHHHHHHHHHHHHHHHHH-HHhcCchh
Confidence            54543 4    4433   79999999999999999999999999 55579996

Proteins of the RFC family are so-far restricted to animals. RFC proteins possess 12 putative transmembrane a-helical spanners (TMSs) and evidence for a 12 TMS topology has been published for the human RFC. The RFC transporters appear to transport reduced folate by an energy-dependent, pH-dependent, Na+-independent mechanism. Folate:H+ symport, folate:OH- antiport and folate:anion antiport mechanisms have been proposed, but the energetic mechanism is not well defined.

>TIGR00903 2A0129 major facilitator 4 family protein

Probab=97.88  E-value=0.00072  Score=68.03  Aligned_cols=126  Identities=13%  Similarity=-0.010  Sum_probs=79.3

Q ss_pred             HHHHHHHhcCCCCchhHHHhhHHHHHHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHHhcCCCcCcchHHHHH
Q 015168          233 LMTAFLTQRGLNPSIIGGFSGLCASMGVAATFLSAYLVRRLGILKAGAAGLIFQASLLAMAVAVYWSGSLSQQNPLLFFL  312 (412)
Q Consensus       233 ~~~~y~~~~gls~~~~G~~~~~~avggllGt~l~~~l~~R~g~~r~~~~~~~~~~~~l~~~v~~~~~g~~~~~~~~~l~~  312 (412)
                      ..+.+.+++|+|+.++|++.+...++..++.+..+++.+|+|+++........ ......  ......+    ..  .+.
T Consensus        13 ~lp~i~~~~~~s~~~~g~~~s~~~~g~~i~~~~~G~l~Dr~grr~~~~~~~~~-~~~~~~--~~~~~~~----~~--~l~   83 (368)
T TIGR00903        13 VLSLVAEDIDVSKEELGLLAITYPAAFLALTIPSGLLLDRAFKRWFLFGSLAT-FAAAAG--RLLDPFN----YE--WLL   83 (368)
T ss_pred             hHHHHHHHhCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHccchHHHHHHHHH-HHHHHH--HHHHhcc----HH--HHH
Confidence            35666778999999999999999999999999999999999976654433221 111111  1111111    11  111


Q ss_pred             HHHHHhhhhhhhhhhhhhHHhhccCCcccchhHHHHHHHHHHHHHHHHHHHHHhcc
Q 015168          313 CLIVLSRLGHMSYDIVGAQILQTGIPSSKANLIGTTEISVASLVESVMLGVAIIAN  368 (412)
Q Consensus       313 ~g~~~sr~GLw~~dl~~~~l~Q~~vp~~~~G~v~g~~~sl~~~~~ll~~~~~~~~~  368 (412)
                      .+-++.++|.-.+ ........|..|+++||++.+...+-+..-.++...++....
T Consensus        84 ~~R~l~G~g~~~~-~~~~~~~~~~~~~~~r~~a~~~~~~~~~lG~~l~~~~~~~l~  138 (368)
T TIGR00903        84 ACQLLAALGQPFL-LNAFAPAASQIREERRDLVISLLSFAMYLGIIFALAAGLKIY  138 (368)
T ss_pred             HHHHHHHhHhHHH-HHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            1211122232122 233334478889999999999999888876666666654443

This family of proteins are uncharacterized proteins from archaea. This family includes proteins from Archaeoglobus fulgidus and Aeropyrum pernix.

>PRK14995 methyl viologen resistance protein SmvA; Provisional

Probab=97.87  E-value=0.0012  Score=68.94  Aligned_cols=137  Identities=13%  Similarity=-0.045  Sum_probs=90.8

Q ss_pred             HHHHHHhcCCCCchhHHHhhHHHHHHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHHhcCCCcCcchHHH--H
Q 015168          234 MTAFLTQRGLNPSIIGGFSGLCASMGVAATFLSAYLVRRLGILKAGAAGLIFQASLLAMAVAVYWSGSLSQQNPLLF--F  311 (412)
Q Consensus       234 ~~~y~~~~gls~~~~G~~~~~~avggllGt~l~~~l~~R~g~~r~~~~~~~~~~~~l~~~v~~~~~g~~~~~~~~~l--~  311 (412)
                      .+.+.+++|.++.++++..+...++...+....+++.+|+|+++...++..........+  .+.. +   ...++.  +
T Consensus        29 ~p~i~~~l~~s~~~~~~~~~~~~l~~~~~~~~~G~l~D~~Grk~~l~~~~~~~~~~~~~~--~~a~-~---~~~li~~r~  102 (495)
T PRK14995         29 APTLSMTLGASGNELLWIIDIYSLVMAGMVLPMGALGDRIGFKRLLMLGGTLFGLASLAA--AFSP-T---ASWLIATRA  102 (495)
T ss_pred             HHHHHHHhCCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHH--HHcC-C---HHHHHHHHH
Confidence            344456799999999999999999999999999999999999999988776433333332  2221 1   111111  1


Q ss_pred             HHHHHHhhhhhhhhhhhhhHHhhccCCcccchhHHHHHHHHHHHHHHHHHHHHHhccCCCchhHHHHHH
Q 015168          312 LCLIVLSRLGHMSYDIVGAQILQTGIPSSKANLIGTTEISVASLVESVMLGVAIIANDVSHFGFLATLS  380 (412)
Q Consensus       312 ~~g~~~sr~GLw~~dl~~~~l~Q~~vp~~~~G~v~g~~~sl~~~~~ll~~~~~~~~~~~~~f~~l~~~s  380 (412)
                      +.|+   ..|. ....+...+.+...|+++||+..|...+.......+.+.++....+...+.+...+.
T Consensus       103 l~G~---g~~~-~~~~~~~~l~~~~~~~~~r~~~~g~~~~~~~~g~~~gp~lgg~l~~~~gwr~~f~i~  167 (495)
T PRK14995        103 LLAI---GAAM-IVPATLAGIRATFTEEKQRNMALGVWAAVGSGGAAFGPLVGGILLEHFYWGSVFLIN  167 (495)
T ss_pred             HHHH---HHHH-HHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCChHHHHHHH
Confidence            1222   1122 233444445566668899999999999999887777777766665544444444443

>TIGR00880 2_A_01_02 Multidrug resistance protein

Probab=97.87  E-value=0.00041  Score=57.71  Aligned_cols=114  Identities=15%  Similarity=0.050  Sum_probs=72.0

Q ss_pred             HhhHHHHHHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHHhcCCCcCcchHHHHHHHHHHhhhhhhhhhhhhh
Q 015168          251 FSGLCASMGVAATFLSAYLVRRLGILKAGAAGLIFQASLLAMAVAVYWSGSLSQQNPLLFFLCLIVLSRLGHMSYDIVGA  330 (412)
Q Consensus       251 ~~~~~avggllGt~l~~~l~~R~g~~r~~~~~~~~~~~~l~~~v~~~~~g~~~~~~~~~l~~~g~~~sr~GLw~~dl~~~  330 (412)
                      +.....++.+.+....+++.+|+|+++....+......+....  . ...+    ...  +.......+++.-..+....
T Consensus         3 ~~~~~~~~~~~~~~~~g~~~d~~g~~~~~~~~~~~~~~~~~~~--~-~~~~----~~~--~~~~~~~~g~~~~~~~~~~~   73 (141)
T TIGR00880         3 LLAGYALGQLIYSPLSGLLTDRFGRKPVLLVGLFIFVLSTAMF--A-LSSN----ITV--LIIARFLQGFGAAFALVAGA   73 (141)
T ss_pred             EEEeehhHHHHHHhhHHHHHhhcchhHHHHHHHHHHHHHHHHH--H-Hhcc----HHH--HHHHHHHHHHHHHHHHHhHH
Confidence            4456678889999999999999999988776654333222211  1 1111    111  11112222233323456677


Q ss_pred             HHhhccCCcccchhHHHHHHHHHHHHHHHHHHHHHhccCCCch
Q 015168          331 QILQTGIPSSKANLIGTTEISVASLVESVMLGVAIIANDVSHF  373 (412)
Q Consensus       331 ~l~Q~~vp~~~~G~v~g~~~sl~~~~~ll~~~~~~~~~~~~~f  373 (412)
                      ...+|..|+++||++++..++.++....+.........+...+
T Consensus        74 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~  116 (141)
T TIGR00880        74 ALIADIYPPEERGVALGLMSAGIALGPLLGPPLGGVLAQFLGW  116 (141)
T ss_pred             HHHHHHCChhhhhHHHHHHHHhHHHHHHHhHHhHHHHhcccch
Confidence            7788999999999999999999988766666665555444333

>PRK11195 lysophospholipid transporter LplT; Provisional

Probab=97.86  E-value=0.0005  Score=69.57  Aligned_cols=122  Identities=9%  Similarity=-0.093  Sum_probs=89.4

Q ss_pred             HHHHhcCCCCchhHHHhhHHHHHHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHHhcCCCcCcchHHHHHHHH
Q 015168          236 AFLTQRGLNPSIIGGFSGLCASMGVAATFLSAYLVRRLGILKAGAAGLIFQASLLAMAVAVYWSGSLSQQNPLLFFLCLI  315 (412)
Q Consensus       236 ~y~~~~gls~~~~G~~~~~~avggllGt~l~~~l~~R~g~~r~~~~~~~~~~~~l~~~v~~~~~g~~~~~~~~~l~~~g~  315 (412)
                      .+.+++|.++..+|+..+...+...+...+.+++.+|+|++|+..++.....+..+.+  .+.. .    ....-++.  
T Consensus        28 ~~~~~~~~s~~~~~~~~~~~~l~~~l~~~~~G~laDr~grr~vl~~~~~~~~~~~~~~--~~~~-~----~~~~r~l~--   98 (393)
T PRK11195         28 ALLKELHYPDWSQPLLQMFFVLAYIVLAPFVGAFADSFPKGRVMFIANGIKLLGCLLM--LFGI-H----PLLAYGLV--   98 (393)
T ss_pred             HHHHHcCCcHHHHHHHHHHHHHHHHHHHhhhhHhhhccCCchhhHHHHHHHHHHHHHH--HHHH-H----HHHHHHHH--
Confidence            3457899999999999999999999999999999999999999998877554333222  1111 1    11111122  


Q ss_pred             HHhhhhhhhhhhhhhHHhhccCCcccchhHHHHHHHHHHHHHHHHHHHHHhccC
Q 015168          316 VLSRLGHMSYDIVGAQILQTGIPSSKANLIGTTEISVASLVESVMLGVAIIAND  369 (412)
Q Consensus       316 ~~sr~GLw~~dl~~~~l~Q~~vp~~~~G~v~g~~~sl~~~~~ll~~~~~~~~~~  369 (412)
                         ++|--.+..+...+.-+.+|+++|++++|..+...+....+.+.++....+
T Consensus        99 ---G~~~a~~~pa~~a~i~~~~~~~~~~~a~~~~~~~~~~~~~~Gp~lgG~l~~  149 (393)
T PRK11195         99 ---GIGAAAYSPAKYGILTELLPGEKLVKANGWMEGSTIAAILLGTVLGGALAD  149 (393)
T ss_pred             ---HHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence               334444777888899999999999999999999888766666666554433

>PRK09874 drug efflux system protein MdtG; Provisional

Probab=97.85  E-value=0.0011  Score=66.53  Aligned_cols=127  Identities=12%  Similarity=-0.006  Sum_probs=80.1

Q ss_pred             chHHHHHHHhcCCCCch-----hHHHhhHHHHHHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHHhcCCCcCc
Q 015168          231 GSLMTAFLTQRGLNPSI-----IGGFSGLCASMGVAATFLSAYLVRRLGILKAGAAGLIFQASLLAMAVAVYWSGSLSQQ  305 (412)
Q Consensus       231 ~~~~~~y~~~~gls~~~-----~G~~~~~~avggllGt~l~~~l~~R~g~~r~~~~~~~~~~~~l~~~v~~~~~g~~~~~  305 (412)
                      ....+.|.+++|+++..     .|+..+...++..++....+++.+|+|+++...++...........  .. ..+.. .
T Consensus        34 ~~~l~~~~~~~g~~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~--~~-~~~~~-~  109 (408)
T PRK09874         34 MPFLPLYVEQLGVTGHSALNMWSGLVFSITFLFSAIASPFWGGLADRKGRKIMLLRSALGMGIVMVLM--GL-AQNIW-Q  109 (408)
T ss_pred             hhhHHHHHHHhCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhCcHHHHHHHHHHHHHHHHHH--HH-HhhHH-H
Confidence            33467788889998764     4899999999999999999999999999988876655333222111  11 11100 0


Q ss_pred             chHHHHHHHHHHhhhhhhhhhhhhhHHhhccCCcccchhHHHHHHHHHHHHHHHHHHHHHhc
Q 015168          306 NPLLFFLCLIVLSRLGHMSYDIVGAQILQTGIPSSKANLIGTTEISVASLVESVMLGVAIIA  367 (412)
Q Consensus       306 ~~~~l~~~g~~~sr~GLw~~dl~~~~l~Q~~vp~~~~G~v~g~~~sl~~~~~ll~~~~~~~~  367 (412)
                      ..+..++.|+.   .+.  ++ .......+..|+++||++++..+...+....+...+....
T Consensus       110 ~~~~~~~~g~~---~~~--~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l  165 (408)
T PRK09874        110 FLILRALLGLL---GGF--VP-NANALIATQVPRNKSGWALGTLSTGGVSGALLGPLAGGLL  165 (408)
T ss_pred             HHHHHHHHHHh---hhh--HH-hHHHHHHHhcCHhhhhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            00111122221   122  33 3445667778999999999998887766555555554433

>PRK12307 putative sialic acid transporter; Provisional

Probab=97.84  E-value=0.0012  Score=66.94  Aligned_cols=132  Identities=7%  Similarity=-0.110  Sum_probs=85.8

Q ss_pred             HhcCCCCchhHHHhhHHHHHHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHHhcCCCcCcchHHHHHHHHHHh
Q 015168          239 TQRGLNPSIIGGFSGLCASMGVAATFLSAYLVRRLGILKAGAAGLIFQASLLAMAVAVYWSGSLSQQNPLLFFLCLIVLS  318 (412)
Q Consensus       239 ~~~gls~~~~G~~~~~~avggllGt~l~~~l~~R~g~~r~~~~~~~~~~~~l~~~v~~~~~g~~~~~~~~~l~~~g~~~s  318 (412)
                      ++.|+|+.+.|+..+...++..++....+++.+|+|+++...++.....+.....  .+.. +    ..  .+..+-++.
T Consensus        46 ~~~~~s~~~~~~~~~~~~~~~~l~~~~~g~l~dr~g~r~~l~~~~~~~~~~~~~~--~~~~-~----~~--~l~~~r~l~  116 (426)
T PRK12307         46 ADLGLTDMEGAFLATAAFIGRPFGGALFGLLADKFGRKPLMMWSIVAYSVGTGLS--GLAS-G----VI--MLTLSRFIV  116 (426)
T ss_pred             HHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHH--HHHh-H----HH--HHHHHHHHH
Confidence            4689999999999999999999999999999999999999887766433322221  2211 1    11  111122222


Q ss_pred             hhhhhhhhhhhhHHhhccCCcccchhHHHHHHHHHHHHHHHHHHHHHhccCCCchhHHHHH
Q 015168          319 RLGHMSYDIVGAQILQTGIPSSKANLIGTTEISVASLVESVMLGVAIIANDVSHFGFLATL  379 (412)
Q Consensus       319 r~GLw~~dl~~~~l~Q~~vp~~~~G~v~g~~~sl~~~~~ll~~~~~~~~~~~~~f~~l~~~  379 (412)
                      ++|.-........+..+..|+++||++++...+.......+...+.....+...+.....+
T Consensus       117 G~g~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~lg~~~~~~l~~~l~~~~~w~~~f~i  177 (426)
T PRK12307        117 GMGMAGEYACASTYAVESWPKHLKSKASAFLVSGFGIGNIIAAYFMPSFAEAYGWRAAFFV  177 (426)
T ss_pred             HHHHhhHHHHHHHHHHHhCCHhHhhHhhhHHHHHHhHHHHHHHHHHHHHcccCCHHHHHHH
Confidence            3333234556677788889999999999998877666555554444333333333333333

>KOG2504 consensus Monocarboxylate transporter [Carbohydrate transport and metabolism]

Probab=97.84  E-value=0.0053  Score=64.53  Aligned_cols=351  Identities=15%  Similarity=0.071  Sum_probs=177.6

Q ss_pred             HHhhhhhcchhccCCcHHHHHHHHHHHHHHHHHHHHHHHHHhccccccccchhHHHHHH-HHHHHHHHHHHhhhhhhhhc
Q 015168           10 IVGGPLVGKLMDHSPRIPAYICLNTVQAAAQLLSAAMIIHAHTVIPTSSSMLLHPWFFV-LVLAGAVERLTGVALGVAVE   88 (412)
Q Consensus        10 ll~g~~~G~~vDr~~R~~v~~~~~~~q~~~v~~s~~~~~~~~~~~~~~~~~~~~~l~~~-~~~~g~~~~l~~~a~~~ai~   88 (412)
                      ++.||+++.+.||++.|+++++..++......++      .+..+      . |.+++. -++.|....+........+.
T Consensus        95 ~~~gpl~s~l~~rfg~R~v~i~G~~v~~~g~~ls------sF~~~------i-~~l~lt~gvi~G~G~~~~~~paiviv~  161 (509)
T KOG2504|consen   95 LLAGPLVSALCNRFGCRTVMIAGGLVAALGLLLS------SFATS------L-WQLYLTFGVIGGLGLGLIYLPAVVILG  161 (509)
T ss_pred             HHhccHHHHHHhhcCchHHHHHHHHHHHHHHHHH------HHHhh------H-HHHHHHHHHHhhccchhhhcchhhhhh
Confidence            4459999999999999999888876554433322      22221      2 233322 22333333333333322222


Q ss_pred             ccceeeecCCCchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhcChhHHHHHHHHHHHHHHHHHHHHHHHhhhcccccc
Q 015168           89 RDWAVLLAGINRPIALAKANAVLNRIDLLCEIAGASLFGILLSKYEPVTCLKFAAGLIMWSLPVMIILTWFTNKISSGVL  168 (412)
Q Consensus        89 RDwv~~l~~~~~~~~L~~~Ns~l~~id~v~~llgP~lgG~L~~~~~~~~~~~~~~~~~~~s~~~~~~~l~~~~~~~~~~l  168 (412)
                      +     -+++    +...+|+.-..-..+..++=|.+--.++.-.||+..++...... ++..+...   ..+.+..+..
T Consensus       162 ~-----YF~k----kR~lA~Gia~~GsG~G~~~~~~l~~~l~~~~G~r~~~l~~~~~~-l~~~~~~~---~~rp~~~~~~  228 (509)
T KOG2504|consen  162 T-----YFEK----KRALATGIAVSGTGVGTVVFPPLLKYLLSKYGWRGALLIFGGIS-LNVLVAGA---LLRPLSPPKK  228 (509)
T ss_pred             h-----HhHH----HHHHHHhhhhccCCcceeeHHHHHHHHHHHhCcHHHHHHHHHHH-HHHHHHHH---HcCCCCcCCC
Confidence            1     1333    57788888888899999899999999999999998876543332 22222211   1111111010


Q ss_pred             cc-----------------cccccc-ccCCCCCC---CCCCchhhhHHhHH--HHHHhH----HHHhcCCcchH-HHHHH
Q 015168          169 DR-----------------AKCSQS-CCRTSNEG---PVPDADNIVDVGIE--AIKLGW----KEYMQQPVLPA-SLAYV  220 (412)
Q Consensus       169 ~~-----------------~~~~~~-~~~~~~~~---~~~~~~~~~~~~~~--~~~~g~----~~~~~~~v~~~-~~~~a  220 (412)
                      +.                 +.+.+. +.++...+   ...+..+..+...+  ......    ..+++||.|+- .++..
T Consensus       229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ll~~~~fl~~~~~~~  308 (509)
T KOG2504|consen  229 PNEEKDLRNSAASVESTPKPVELRISERDSGLKKLSLSNLATLKRGPDKWRNSPLQAFLSMLDLSLLKDPKFLLLALSNL  308 (509)
T ss_pred             chhhhhhccccccccccccccccccccCCCCCCcccccchhhhhhCCccccccchhhhhhhhhHHHHcCchHHHHHHHHH
Confidence            00                 000000 00000000   00000000000000  111222    35778887776 22222


Q ss_pred             HHHHHhhhccchHHHHHHHhcCCCCchhHHHhhHHHHHHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHHhcC
Q 015168          221 LLCLNVVLTPGSLMTAFLTQRGLNPSIIGGFSGLCASMGVAATFLSAYLVRRLGILKAGAAGLIFQASLLAMAVAVYWSG  300 (412)
Q Consensus       221 ~l~~t~v~~~~~~~~~y~~~~gls~~~~G~~~~~~avggllGt~l~~~l~~R~g~~r~~~~~~~~~~~~l~~~v~~~~~g  300 (412)
                      +.++. ...+......|.+++|+++.....+..+.++..+.|=++.+.+..+....+.-...+..-...+..+..++...
T Consensus       309 ~~~~g-~~~p~~~l~~~~~~~g~~~~~aa~l~Siigi~~i~gRi~~G~laD~~~~~~~~~~~~~ll~~gl~~~~~p~~~~  387 (509)
T KOG2504|consen  309 FAYLG-FNVPFVYLPSYAKSLGLSSNDAAFLLSIIGVSDIIGRIILGLLADKPGIRALVLFLLTLLIAGLARLFLPFATT  387 (509)
T ss_pred             HHHHH-HHHHHHHHHHHHhhcCCChhhhHHHHHHHHHhhhhhhhhhhhhcCccccchHHHHHHHHHHHHHHHHHHHHhcc
Confidence            22221 11111234556778999999999999999999999999999999988843332211111001111111122211


Q ss_pred             CCcCcchHHHHHHHHHHhhhhhhhhhhhhhHHhhccCCcccchhHHHHHHHHHHHHHHHHHHHHHhccCCCc-hhHHHHH
Q 015168          301 SLSQQNPLLFFLCLIVLSRLGHMSYDIVGAQILQTGIPSSKANLIGTTEISVASLVESVMLGVAIIANDVSH-FGFLATL  379 (412)
Q Consensus       301 ~~~~~~~~~l~~~g~~~sr~GLw~~dl~~~~l~Q~~vp~~~~G~v~g~~~sl~~~~~ll~~~~~~~~~~~~~-f~~l~~~  379 (412)
                          ...+..+ ..+.....|-  +-.-...+.-+.+..++...+.|.+.-.+-+..+...-+....-|-+. +......
T Consensus       388 ----~~~l~~~-~~~fG~~~g~--~~~l~~~i~~~~~g~~~l~~a~Gl~l~~~gi~~l~gpPiag~~~d~tg~Y~~~f~~  460 (509)
T KOG2504|consen  388 ----YVGLIVF-SILFGFCVGS--FSSLTPVILVDLVGLEKLSNAYGLLLLFQGIGALVGPPIAGLLYDITGNYDHAFYF  460 (509)
T ss_pred             ----HHHHHHH-HHHHHHHHHH--HHHHHHHHHHHHcChhhcchHHHHHHHHhHHHHHcCcccceeeeeccCCeeeehhh
Confidence                1111111 1111112222  223334567778888999999999999888866666655555544443 4444443


Q ss_pred             H-HHHHHHHHHHHHHH
Q 015168          380 S-LLSVVGAAWMFCHW  394 (412)
Q Consensus       380 s-~~~v~~~~~~~~~~  394 (412)
                      . ++...++...+..+
T Consensus       461 ~g~~~~~s~~~~~~~~  476 (509)
T KOG2504|consen  461 CGLCFLLSAVLLLILR  476 (509)
T ss_pred             cChHHHHHHHHHHHhH
Confidence            3 33333443444433

>PRK03893 putative sialic acid transporter; Provisional

Probab=97.83  E-value=0.0011  Score=68.69  Aligned_cols=135  Identities=13%  Similarity=-0.031  Sum_probs=90.2

Q ss_pred             HHHHhcCCCCchhHHHhhHHHHHHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHHhcCCCcCcchHHHHHHHH
Q 015168          236 AFLTQRGLNPSIIGGFSGLCASMGVAATFLSAYLVRRLGILKAGAAGLIFQASLLAMAVAVYWSGSLSQQNPLLFFLCLI  315 (412)
Q Consensus       236 ~y~~~~gls~~~~G~~~~~~avggllGt~l~~~l~~R~g~~r~~~~~~~~~~~~l~~~v~~~~~g~~~~~~~~~l~~~g~  315 (412)
                      .+.+++|+|+...|++.+...++.+.+....+++.+|+|++|....+.....+.....  .+.. +    ...  +..+.
T Consensus        45 ~i~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~--~~~~-~----~~~--l~~~~  115 (496)
T PRK03893         45 EVQGEFGLTTVQAASLISAAFISRWFGGLLLGAMGDRYGRRLAMVISIVLFSVGTLAC--GFAP-G----YWT--LFIAR  115 (496)
T ss_pred             HHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHH--HHHh-H----HHH--HHHHH
Confidence            3345789999999999999999999999999999999999998876654332221111  1111 1    111  11122


Q ss_pred             HHhhhhhhhhhhhhhHHhhccCCcccchhHHHHHHHHHHHHHHHHHHHHHhccCCCchhHHHHH
Q 015168          316 VLSRLGHMSYDIVGAQILQTGIPSSKANLIGTTEISVASLVESVMLGVAIIANDVSHFGFLATL  379 (412)
Q Consensus       316 ~~sr~GLw~~dl~~~~l~Q~~vp~~~~G~v~g~~~sl~~~~~ll~~~~~~~~~~~~~f~~l~~~  379 (412)
                      ++.+++.-....+...+.++..|+++||++++...+.++....+...+.....+...+.....+
T Consensus       116 ~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~w~~~f~~  179 (496)
T PRK03893        116 LVIGMGMAGEYGSSATYVIESWPKHLRNKASGFLISGFSIGAVVAAQVYSLVVPVWGWRALFFI  179 (496)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCHHHHHHH
Confidence            2223333335566778889999999999999999998887666666665555444444444333

>PRK15402 multidrug efflux system translocase MdfA; Provisional

Probab=97.82  E-value=0.0015  Score=66.05  Aligned_cols=124  Identities=19%  Similarity=0.074  Sum_probs=80.7

Q ss_pred             HHHHHHhcCCCCchhHHHhhHHHHHHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHHhcCCCcCcchHHHHHH
Q 015168          234 MTAFLTQRGLNPSIIGGFSGLCASMGVAATFLSAYLVRRLGILKAGAAGLIFQASLLAMAVAVYWSGSLSQQNPLLFFLC  313 (412)
Q Consensus       234 ~~~y~~~~gls~~~~G~~~~~~avggllGt~l~~~l~~R~g~~r~~~~~~~~~~~~l~~~v~~~~~g~~~~~~~~~l~~~  313 (412)
                      ...+.+++|.|+.+.++..+...++...+....+++.+|+|++|...++.....++...+  .... +    ...++  .
T Consensus        36 ~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~l~dr~g~r~~l~~~~~~~~~~~~~~--~~~~-~----~~~l~--~  106 (406)
T PRK15402         36 MLAVVEDFNAGAEWVPTSMTAYLAGGMFLQWLLGPLSDRIGRRPVMLAGVAFFILTCLAI--LLAQ-S----IEQFT--L  106 (406)
T ss_pred             hHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHH--HHHc-c----HHHHH--H
Confidence            444567899999999999999999999999999999999999998887765333222221  2211 1    11111  1


Q ss_pred             HHHHhhhhhhhhhhhhhHHhhccCCcccchhHHHHHHHHHHHHHHHHHHHHHh
Q 015168          314 LIVLSRLGHMSYDIVGAQILQTGIPSSKANLIGTTEISVASLVESVMLGVAII  366 (412)
Q Consensus       314 g~~~sr~GLw~~dl~~~~l~Q~~vp~~~~G~v~g~~~sl~~~~~ll~~~~~~~  366 (412)
                      +-.+.+++.-..........++..|+++|++..+...........+...++..
T Consensus       107 ~~~l~G~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~  159 (406)
T PRK15402        107 LRFLQGIGLCFIGAVGYAAIQESFEEADAIKITALMANVALLAPLLGPLVGAA  159 (406)
T ss_pred             HHHHHHhHhhhHHHHHHHHHHHHhChhHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            11111222212334556677888899999999998877776555554444433

>PRK09705 cynX putative cyanate transporter; Provisional

Probab=97.82  E-value=0.001  Score=67.20  Aligned_cols=124  Identities=14%  Similarity=0.118  Sum_probs=82.6

Q ss_pred             chHHHHHHHhcCCCCchhHHHhhHHHHHHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHHhcCCCcCcchHHH
Q 015168          231 GSLMTAFLTQRGLNPSIIGGFSGLCASMGVAATFLSAYLVRRLGILKAGAAGLIFQASLLAMAVAVYWSGSLSQQNPLLF  310 (412)
Q Consensus       231 ~~~~~~y~~~~gls~~~~G~~~~~~avggllGt~l~~~l~~R~g~~r~~~~~~~~~~~~l~~~v~~~~~g~~~~~~~~~l  310 (412)
                      +...+...+++|.|..+.|+..+...++..++....+++.+|+|++|+...+..........+  .+.++.     ..++
T Consensus        29 ~~~lp~i~~~~~~s~~~~g~~~s~~~~~~~l~~~~~g~l~dr~G~r~~l~~~~~l~~~~~~~~--~~a~~~-----~~ll  101 (393)
T PRK09705         29 GPLLPQLRQASGMSFSVAALLTALPVVTMGGLALAGSWLHQHVSERRSVAISLLLIAVGALMR--ELYPQS-----ALLL  101 (393)
T ss_pred             chhHHHHHHHhCCCHHHHHHHHHHHHHHHHHHhhhhHHHHHHhCchHHHHHHHHHHHHHHHHH--HHCcch-----HHHH
Confidence            334555567899999999999999999999999999999999999999998876544333332  333211     1111


Q ss_pred             HHHHHHHhhhhhhhhhhhhhHHhhccCCcccchhHHHHHHHHHHHHHHHHHHHH
Q 015168          311 FLCLIVLSRLGHMSYDIVGAQILQTGIPSSKANLIGTTEISVASLVESVMLGVA  364 (412)
Q Consensus       311 ~~~g~~~sr~GLw~~dl~~~~l~Q~~vp~~~~G~v~g~~~sl~~~~~ll~~~~~  364 (412)
                      +  +-++.++|.-........+.++..| ++||+++|...+.+..-..+...++
T Consensus       102 ~--~r~l~Gig~~~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~~~g~~~g~~~~  152 (393)
T PRK09705        102 S--SALLGGVGIGIIQAVMPSVIKRRFQ-QRTPLVMGLWSAALMGGGGLGAAIT  152 (393)
T ss_pred             H--HHHHHHhHHHHHhhhhhHHHHHHcc-ccchhHHHHHHHHHHHHHHHHHHHH
Confidence            1  2222333333344455555565554 8899999998887766444444443

>TIGR00886 2A0108 nitrite extrusion protein (nitrite facilitator)

Probab=97.80  E-value=0.0017  Score=64.05  Aligned_cols=120  Identities=13%  Similarity=0.116  Sum_probs=77.6

Q ss_pred             cchHHHHHH-HhcCCCCchhHHHhhHHHHHHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHHhcCCCcCcchH
Q 015168          230 PGSLMTAFL-TQRGLNPSIIGGFSGLCASMGVAATFLSAYLVRRLGILKAGAAGLIFQASLLAMAVAVYWSGSLSQQNPL  308 (412)
Q Consensus       230 ~~~~~~~y~-~~~gls~~~~G~~~~~~avggllGt~l~~~l~~R~g~~r~~~~~~~~~~~~l~~~v~~~~~g~~~~~~~~  308 (412)
                      +....+.|+ +++|+|+.+.|++.+...++...+....+++.+|+|++|...++.....+....+  .+...+    ...
T Consensus        20 ~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~i~~~~~--~~~~~~----~~~   93 (366)
T TIGR00886        20 FSPLAVQMIKDDLGLSTAQLGNLVAVPVLAGAVLRIILGFLVDKFGPRYTTTLSLLLLAIPCLWA--GLAVQS----YSV   93 (366)
T ss_pred             hHHhhhHHHHHHhCCCHHHhhHhhHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHH--HHHhhh----HHH
Confidence            444455445 5799999999999999999999999999999999999999887765433322221  221101    111


Q ss_pred             HHHHHHHHHhhhhhhhhhhhhhHHhhccCCcccchhHHHHHHHHHHHHHH
Q 015168          309 LFFLCLIVLSRLGHMSYDIVGAQILQTGIPSSKANLIGTTEISVASLVES  358 (412)
Q Consensus       309 ~l~~~g~~~sr~GLw~~dl~~~~l~Q~~vp~~~~G~v~g~~~sl~~~~~l  358 (412)
                      ++  .+-++.+++--.+. ....+.-+..|+++||++.+...+.++....
T Consensus        94 ~~--~~~~~~g~~~~~~~-~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~  140 (366)
T TIGR00886        94 LL--LLRLFIGIAGGSFA-SCMPWISFFFPKKIQGTALGLAAGWGNMGGG  140 (366)
T ss_pred             HH--HHHHHHHHhchhhH-hHHHHHHHhcCHhhhhHHHHHHHHHhHHHHH
Confidence            11  11111122211233 3455677778999999999998877665433

>PRK10133 L-fucose transporter; Provisional

Probab=97.79  E-value=0.0014  Score=67.40  Aligned_cols=126  Identities=13%  Similarity=0.030  Sum_probs=84.7

Q ss_pred             HHHHHHHhcCCCCchhHHHhhHHHHHHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHHhcCCCcCcchHHHHH
Q 015168          233 LMTAFLTQRGLNPSIIGGFSGLCASMGVAATFLSAYLVRRLGILKAGAAGLIFQASLLAMAVAVYWSGSLSQQNPLLFFL  312 (412)
Q Consensus       233 ~~~~y~~~~gls~~~~G~~~~~~avggllGt~l~~~l~~R~g~~r~~~~~~~~~~~~l~~~v~~~~~g~~~~~~~~~l~~  312 (412)
                      ..+.+.+++|+|+.+.|+..+...++..++....+++.+|+|++|+..++.....+....+.......+      ...+.
T Consensus        48 ~~p~i~~~~~~s~~~~gl~~~~~~~g~~i~~~~~g~l~dr~G~r~~l~~g~~~~~~~~~l~~~~~~a~~------~~~ll  121 (438)
T PRK10133         48 LLPQFQQAFTLTNFQAGLIQSAFYFGYFIIPIPAGILMKKLSYKAGIITGLFLYALGAALFWPAAEIMN------YTLFL  121 (438)
T ss_pred             HHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHhcCC------HHHHH
Confidence            444555579999999999999999999999999999999999999999887654444333211111111      11222


Q ss_pred             HHHHHhhhhhhhhhhhhhHHhhccCCcccchhHHHHHHHHHHHHHHHHHHHH
Q 015168          313 CLIVLSRLGHMSYDIVGAQILQTGIPSSKANLIGTTEISVASLVESVMLGVA  364 (412)
Q Consensus       313 ~g~~~sr~GLw~~dl~~~~l~Q~~vp~~~~G~v~g~~~sl~~~~~ll~~~~~  364 (412)
                      .+.+..++|.-..+.+.+.+..+..|++++++..+...+.+..-..+....+
T Consensus       122 ~~r~l~G~g~g~~~~~~~~~v~~~~~~~~~~~~~s~~~~~~~~G~~~g~~~g  173 (438)
T PRK10133        122 VGLFIIAAGLGCLETAANPFVTVLGPESSGHFRLNLAQTFNSFGAIIAVVFG  173 (438)
T ss_pred             HHHHHHHHHHHHHHhhHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHH
Confidence            2333344455457777777777766677776667777777666555555443

>TIGR00896 CynX cyanate transporter

Probab=97.77  E-value=0.0013  Score=64.99  Aligned_cols=124  Identities=18%  Similarity=0.208  Sum_probs=79.4

Q ss_pred             cchHHHHHHHhcCCCCchhHHHhhHHHHHHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHHhcCCCcCcchHH
Q 015168          230 PGSLMTAFLTQRGLNPSIIGGFSGLCASMGVAATFLSAYLVRRLGILKAGAAGLIFQASLLAMAVAVYWSGSLSQQNPLL  309 (412)
Q Consensus       230 ~~~~~~~y~~~~gls~~~~G~~~~~~avggllGt~l~~~l~~R~g~~r~~~~~~~~~~~~l~~~v~~~~~g~~~~~~~~~  309 (412)
                      ++...+.+.+++|+|+.+.|+..+...++..++....+++.+|+|.+|...++..........   ...+ +    ...+
T Consensus        19 ~~~~lp~l~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~---~~~~-~----~~~l   90 (355)
T TIGR00896        19 VGPLLPQIRSALGMSFSVAGLLTALPVLCFAVLAPLAPWLARRFGEERSVAAGLLLIAAGILI---RSAP-G----TALL   90 (355)
T ss_pred             CcccHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHhCchHHHHHHHHHHHHHHHH---HHhc-c----HHHH
Confidence            344566677889999999999999999999999999999999999999988776532222111   1111 1    1111


Q ss_pred             HHHHHHHHhhhhhhhhhhhhhHHhhccCCcccchhHHHHHHHHHHHHHHHHHHHH
Q 015168          310 FFLCLIVLSRLGHMSYDIVGAQILQTGIPSSKANLIGTTEISVASLVESVMLGVA  364 (412)
Q Consensus       310 l~~~g~~~sr~GLw~~dl~~~~l~Q~~vp~~~~G~v~g~~~sl~~~~~ll~~~~~  364 (412)
                      +  .+-+..++|.-..+.....+..+.. +++||++++..++.++....+...++
T Consensus        91 ~--~~~~~~g~g~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~~i~~~~~  142 (355)
T TIGR00896        91 F--AGTALIGVGIAIINVLLPSLIKRDF-PQRVGLMTGLYSMALMGGAALAAAAT  142 (355)
T ss_pred             H--HHHHHHHHHHHHHhccchHHHHHhC-cchhhHHHHHHHHHHHHHHHHHHHHH
Confidence            1  1111222232122333333444444 46899999999988877555554443

This family of proteins is involved in active transport of cyanate. The cyanate transporter in E.Coli is used to transport cyanate into the cell so it can be metabolized into ammonia and bicarbonate. This process is used to overcome the toxicity of environmental cyanate.

>PRK09556 uhpT sugar phosphate antiporter; Reviewed

Probab=97.76  E-value=0.00035  Score=72.32  Aligned_cols=143  Identities=14%  Similarity=-0.011  Sum_probs=85.8

Q ss_pred             HHHHHHHHHHhhhccchHHHHHHHhcCCCCchhHHHhhHHHHHHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHH
Q 015168          216 SLAYVLLCLNVVLTPGSLMTAFLTQRGLNPSIIGGFSGLCASMGVAATFLSAYLVRRLGILKAGAAGLIFQASLLAMAVA  295 (412)
Q Consensus       216 ~~~~a~l~~t~v~~~~~~~~~y~~~~gls~~~~G~~~~~~avggllGt~l~~~l~~R~g~~r~~~~~~~~~~~~l~~~v~  295 (412)
                      .+.+...|+. -..++...+.+.+++|+|+.++|++.+...++..++....+++.+|+|.+|....+.....+..... .
T Consensus        35 ~~~~~~~y~~-r~~~~~~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~g~r~~l~~~~~~~~~~~~~~-~  112 (467)
T PRK09556         35 FIGYLTMYLI-RKNFKAAQNDMISTYGLSTTELGMIGLGFSITYGVGKTLVGYYADGKNTKQFLPFLLILSAICMLGF-G  112 (467)
T ss_pred             HHHHHHHHHH-hcChhhhhHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhhhhhHhhccCccchHHHHHHHHHHHHHHH-H
Confidence            3334444432 1334444555567899999999999999999999999999999999999998776654322211111 1


Q ss_pred             HHhcCCCcCcchHHHHHHHHHHhhhhhhhhhhhhhHHhhccCCcccchhHHHHHHHHHHHHHHHHHHH
Q 015168          296 VYWSGSLSQQNPLLFFLCLIVLSRLGHMSYDIVGAQILQTGIPSSKANLIGTTEISVASLVESVMLGV  363 (412)
Q Consensus       296 ~~~~g~~~~~~~~~l~~~g~~~sr~GLw~~dl~~~~l~Q~~vp~~~~G~v~g~~~sl~~~~~ll~~~~  363 (412)
                      ....+. +.....++.  .-.+.+++--..-.....+.-+..|+++||++.|...+..+....+...+
T Consensus       113 ~~~~~~-~~~~~~l~~--~r~l~G~~~~~~~~~~~~~i~~~~~~~~rg~a~gi~~~~~~lG~~l~~~i  177 (467)
T PRK09556        113 ASLGSG-SVSLGLMIA--LWALSGFFQSTGGPCSYSTITRWTPRRKRGRFLGFWNISHNLGGAGAGGV  177 (467)
T ss_pred             HHHhcc-cchHHHHHH--HHHHHHHHHhccchHHHHHHHHHcCccceeeeEEeeecccchhhhHHHHH
Confidence            111110 001111111  11111222111224455678888999999999999888776655444433

>PRK11043 putative transporter; Provisional

Probab=97.75  E-value=0.0022  Score=64.58  Aligned_cols=124  Identities=18%  Similarity=0.118  Sum_probs=78.3

Q ss_pred             HHHhcCCCCchhHHHhhHHHHHHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHHhcCCCcCcchHHHHHHHHH
Q 015168          237 FLTQRGLNPSIIGGFSGLCASMGVAATFLSAYLVRRLGILKAGAAGLIFQASLLAMAVAVYWSGSLSQQNPLLFFLCLIV  316 (412)
Q Consensus       237 y~~~~gls~~~~G~~~~~~avggllGt~l~~~l~~R~g~~r~~~~~~~~~~~~l~~~v~~~~~g~~~~~~~~~l~~~g~~  316 (412)
                      +.+++|.|+++.|+..++..++...+....+++.+|+|+++....+.....+....   ..+..+    ...++  .+..
T Consensus        32 i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~---~~~~~~----~~~l~--~~~~  102 (401)
T PRK11043         32 IQADLQTSASAVSASLSLFLAGFALGQLLWGPLSDRYGRKPVLLAGLSLFALGSLG---MLWVES----AAQLL--VLRF  102 (401)
T ss_pred             HHHHHCCCHHHHHHHHHHHHHHHHHHHHhhhhHHhhcCCcHHHHHHHHHHHHHHHH---HHHhcC----HHHHH--HHHH
Confidence            45678999999999999999999999999999999999999887665432222111   111111    11111  1112


Q ss_pred             HhhhhhhhhhhhhhHHhhccCCcccchhHHHHHHHHHHHHHHHHHHHHHhccC
Q 015168          317 LSRLGHMSYDIVGAQILQTGIPSSKANLIGTTEISVASLVESVMLGVAIIAND  369 (412)
Q Consensus       317 ~sr~GLw~~dl~~~~l~Q~~vp~~~~G~v~g~~~sl~~~~~ll~~~~~~~~~~  369 (412)
                      +.++|.-........+..+..|+++++++.+...+.......+...++....+
T Consensus       103 l~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~l~~  155 (401)
T PRK11043        103 VQAVGVCSAAVIWQALVIDRYPAQKANRVFATIMPLVALSPALAPLLGAWLLN  155 (401)
T ss_pred             HHHhhhHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence            22222212233445566777888889988888777666555555555444433

>KOG0254 consensus Predicted transporter (major facilitator superfamily) [General function prediction only]

Probab=97.74  E-value=0.032  Score=58.60  Aligned_cols=121  Identities=17%  Similarity=0.115  Sum_probs=69.9

Q ss_pred             HHhcCCCCchhHHHhhHHHHHHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHH-HhcCC-C--cCcchHH-HHH
Q 015168          238 LTQRGLNPSIIGGFSGLCASMGVAATFLSAYLVRRLGILKAGAAGLIFQASLLAMAVAV-YWSGS-L--SQQNPLL-FFL  312 (412)
Q Consensus       238 ~~~~gls~~~~G~~~~~~avggllGt~l~~~l~~R~g~~r~~~~~~~~~~~~l~~~v~~-~~~g~-~--~~~~~~~-l~~  312 (412)
                      .++.|.+... -..--.-++..+.+++++..+.+|+|+++.++.+...+..+....... ..... .  ....... +..
T Consensus       322 f~~~g~~~~~-~~~~~~~~~v~~~~t~~~~~lvd~~gRr~lll~s~~~m~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  400 (513)
T KOG0254|consen  322 FKSAGLKSDT-FLASIILGVVNFLGTLVATYLVDRFGRRKLLLFGAAGMSICLVILAVVGVFALYYPNSSKGAGWLAIVF  400 (513)
T ss_pred             HHhcCCCCch-HHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHhHHHHHHHHHHHHHHHHHhccCCCcccchhHHHHHH
Confidence            4556776543 333344455556788888999999999999998887766655443322 11111 0  0001111 111


Q ss_pred             HHHHHhhhhhhhhhhhhhHHhhccCCcccchhHHHHHHHHHHHHHHHH
Q 015168          313 CLIVLSRLGHMSYDIVGAQILQTGIPSSKANLIGTTEISVASLVESVM  360 (412)
Q Consensus       313 ~g~~~sr~GLw~~dl~~~~l~Q~~vp~~~~G~v~g~~~sl~~~~~ll~  360 (412)
                      ..+....+.. .+...--.+.-|..|.+.|++..+...+.|+....+.
T Consensus       401 ~~~~v~~f~~-g~g~v~w~~~sEifp~~~r~~~~s~~~~~n~~~~~~v  447 (513)
T KOG0254|consen  401 LCLFIFSFAI-GWGPVPWVIVSEIFPLRLRSKGASLAVAVNWLWNFLI  447 (513)
T ss_pred             HHHHHHHHhc-ccccchhhhhhccCcHhHHhhhHHHHHHHHHHHHHHH
Confidence            1111111111 2223333567788899999999999999999866544

>PRK09528 lacY galactoside permease; Reviewed

Probab=97.70  E-value=0.0009  Score=68.02  Aligned_cols=77  Identities=14%  Similarity=0.098  Sum_probs=60.6

Q ss_pred             HhcCCcchHHHHHHHHH-HHhhhccchHHHHHHHh-cCCCCchhHHHhhHHHHHHHHHHHHHHHHHHHhchhhHHHHHHH
Q 015168          207 YMQQPVLPASLAYVLLC-LNVVLTPGSLMTAFLTQ-RGLNPSIIGGFSGLCASMGVAATFLSAYLVRRLGILKAGAAGLI  284 (412)
Q Consensus       207 ~~~~~v~~~~~~~a~l~-~t~v~~~~~~~~~y~~~-~gls~~~~G~~~~~~avggllGt~l~~~l~~R~g~~r~~~~~~~  284 (412)
                      +++||.++......+++ +. ...+.+....|+++ +|+|+.+.|+..+...++..++....+++.+|+|++|...++..
T Consensus         6 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~l~~~~g~s~~~~g~~~s~~~l~~~i~~~~~G~l~Dr~g~r~~~~~~~~   84 (420)
T PRK09528          6 YLKNPNYWIFSLFFFFFFFI-WSSWFSFFPIWLHDINGLSGTDTGIIFSANSLFALLFQPLYGLISDKLGLKKHLLWIIS   84 (420)
T ss_pred             hhcCcchHHHHHHHHHHHHH-HHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHH
Confidence            46788888754444444 32 13345677888876 89999999999999999999999999999999999998876543

>PF05977 MFS_3: Transmembrane secretion effector; InterPro: IPR010290 This family consists of the enterobactin exporter EntS proteins and putative permeases all belonging to the major facilitator superfamily

Probab=97.70  E-value=0.0014  Score=69.07  Aligned_cols=174  Identities=10%  Similarity=0.069  Sum_probs=109.5

Q ss_pred             hcCCcchHHHHHHHHHHHhhhccchH-HHHHHHhcCCCCchhHHHhhHHHHHHHHHHHHHHHHHHHhchhhHHHHHHHHH
Q 015168          208 MQQPVLPASLAYVLLCLNVVLTPGSL-MTAFLTQRGLNPSIIGGFSGLCASMGVAATFLSAYLVRRLGILKAGAAGLIFQ  286 (412)
Q Consensus       208 ~~~~v~~~~~~~a~l~~t~v~~~~~~-~~~y~~~~gls~~~~G~~~~~~avggllGt~l~~~l~~R~g~~r~~~~~~~~~  286 (412)
                      +|||.|+.-..-..+... ...+..+ ...|.+++.-|+..+|++..+..+-.++-+..++.+..|++++|.+.++-.++
T Consensus         7 lr~~~Fr~lw~a~~iS~l-G~~~~~va~~wlv~~lt~S~~~valv~~a~~LP~~Llsl~aG~laDr~drrrili~~~~~~   85 (524)
T PF05977_consen    7 LRNRNFRRLWIAQLISNL-GDWMQTVALAWLVTQLTGSPLMVALVQAASTLPILLLSLFAGALADRFDRRRILILSQLLR   85 (524)
T ss_pred             ccCchHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHhhcccchHHHHHHHHHH
Confidence            577777773332222210 1111111 33456677889999999999999999999999999999999999998877765


Q ss_pred             HHHHHHHHHHHhcCCCcCcchHHHHHHHHHHhhhhhhhhhhhhhHHhhccCCcccchhHHHHHHHHHHHHHHHHHHHHH-
Q 015168          287 ASLLAMAVAVYWSGSLSQQNPLLFFLCLIVLSRLGHMSYDIVGAQILQTGIPSSKANLIGTTEISVASLVESVMLGVAI-  365 (412)
Q Consensus       287 ~~~l~~~v~~~~~g~~~~~~~~~l~~~g~~~sr~GLw~~dl~~~~l~Q~~vp~~~~G~v~g~~~sl~~~~~ll~~~~~~-  365 (412)
                      .+.........+.+..+   +..++. -.++.+++--.++.+.+.+..+.||+++..++|+..+...+...++.+.+++ 
T Consensus        86 ~~~~~~L~~l~~~~~~~---~~~Ll~-~~fl~g~~~a~~~PA~~A~ip~lV~~~~L~~A~al~s~~~niar~iGPalgG~  161 (524)
T PF05977_consen   86 ALVALLLAVLAFFGLLS---PWLLLI-LTFLLGIGSAFFNPAWQAIIPELVPKEDLPAANALNSISFNIARIIGPALGGI  161 (524)
T ss_pred             HHHHHHHHHHHHhCcCC---HHHHHH-HHHHHHHHHHHHHHHHHHHHHHhccHhhHHHHHHHHHHHHHHHHhccchHHHH
Confidence            54433332233344322   111111 1122233444588999999999999999999999998888887666655543 


Q ss_pred             hccCCCchhHHHHHHHHHHHH
Q 015168          366 IANDVSHFGFLATLSLLSVVG  386 (412)
Q Consensus       366 ~~~~~~~f~~l~~~s~~~v~~  386 (412)
                      +...-+.-....+-+++.+.+
T Consensus       162 Lva~~G~~~~f~inalsfl~~  182 (524)
T PF05977_consen  162 LVAFFGAAAAFLINALSFLIS  182 (524)
T ss_pred             HHHHHHHHHHHHHHHHHHHHH
Confidence            333333333333334444443

EntS exports the siderophore enterobactin out of the cell. The genetic locus entS was changed from ybdA so as to reflect its relevant biological function [].

>TIGR01299 synapt_SV2 synaptic vesicle protein SV2

Probab=97.66  E-value=0.0027  Score=69.68  Aligned_cols=116  Identities=11%  Similarity=-0.067  Sum_probs=79.6

Q ss_pred             HHHhcCCCCchhHHHhhHHHHHHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHHhcCCCcCcchHHHHHHHHH
Q 015168          237 FLTQRGLNPSIIGGFSGLCASMGVAATFLSAYLVRRLGILKAGAAGLIFQASLLAMAVAVYWSGSLSQQNPLLFFLCLIV  316 (412)
Q Consensus       237 y~~~~gls~~~~G~~~~~~avggllGt~l~~~l~~R~g~~r~~~~~~~~~~~~l~~~v~~~~~g~~~~~~~~~l~~~g~~  316 (412)
                      +..+.|+++...|++.++..++.++|+++.+++..|+|+++...++.....++.+.+  .+.+ +    ...  +..+-+
T Consensus       193 i~~~~gls~~~~g~l~s~~~lG~iiG~li~G~LsDR~GRR~~lii~lil~~i~~ll~--afa~-s----~~~--llv~R~  263 (742)
T TIGR01299       193 AEKDLCIPDSGKGMLGLIVYLGMMVGAFFWGGLADKLGRKQCLLICLSVNGFFAFFS--SFVQ-G----YGF--FLFCRL  263 (742)
T ss_pred             HHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHH--HHHh-h----HHH--HHHHHH
Confidence            345789999999999999999999999999999999999999887765433332222  2222 1    111  111222


Q ss_pred             HhhhhhhhhhhhhhHHhhccCCcccchhHHHHHHHHHHHHHHHHH
Q 015168          317 LSRLGHMSYDIVGAQILQTGIPSSKANLIGTTEISVASLVESVML  361 (412)
Q Consensus       317 ~sr~GLw~~dl~~~~l~Q~~vp~~~~G~v~g~~~sl~~~~~ll~~  361 (412)
                      +.++|.-..-.....+..|..|++.||++.+..++......++..
T Consensus       264 l~G~g~g~~~p~~~~~isE~~p~~~Rg~~~g~~~~~~~iG~ila~  308 (742)
T TIGR01299       264 LSGFGIGGAIPIVFSYFAEFLAQEKRGEHLSWLCMFWMIGGIYAA  308 (742)
T ss_pred             HHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence            223343334456677788889999999999988877665444443

This model describes a tightly conserved subfamily of the larger family of sugar (and other) transporters described by pfam model pfam00083. Members of this subfamily include closely related forms SV2A and SV2B of synaptic vesicle protein from vertebrates and a more distantly related homolog (below trusted cutoff) from Drosophila melanogaster. Members are predicted to have two sets of six transmembrane helices.

>PRK08633 2-acyl-glycerophospho-ethanolamine acyltransferase; Validated

Probab=97.63  E-value=0.0015  Score=74.87  Aligned_cols=121  Identities=8%  Similarity=-0.002  Sum_probs=82.2

Q ss_pred             cCCC--CchhHHHhhHHHHHHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHHhcCCCcCcchHHHHHHHHHHh
Q 015168          241 RGLN--PSIIGGFSGLCASMGVAATFLSAYLVRRLGILKAGAAGLIFQASLLAMAVAVYWSGSLSQQNPLLFFLCLIVLS  318 (412)
Q Consensus       241 ~gls--~~~~G~~~~~~avggllGt~l~~~l~~R~g~~r~~~~~~~~~~~~l~~~v~~~~~g~~~~~~~~~l~~~g~~~s  318 (412)
                      .+.+  ....|+..++..++.++++...+++..|+|+++.+.++.....+...........++      ...+..+.++.
T Consensus        40 ~~~~~~~~~~~~~~~~~~l~~~l~~~~~G~l~Dr~grk~~l~~~~~~~~~~~~~~~~~~~~~~------~~~l~~~r~l~  113 (1146)
T PRK08633         40 YDGSEQVILTAIVNALFLLPFLLLSSPAGFLADKFSKNRVIRIVKLFEVGLTLLIVLAYYLGW------FWLAFAVTFLL  113 (1146)
T ss_pred             cCcccHHHHHHHHHHHHHHHHHHHhhhHhhhcccccHHHHHHHHHHHHHHHHHHHHHHHHHcc------HHHHHHHHHHH
Confidence            4444  445788889999999999999999999999999988776654433333222222211      11111222223


Q ss_pred             hhhhhhhhhhhhHHhhccCCcccchhHHHHHHHHHHHHHHHHHHHHHhc
Q 015168          319 RLGHMSYDIVGAQILQTGIPSSKANLIGTTEISVASLVESVMLGVAIIA  367 (412)
Q Consensus       319 r~GLw~~dl~~~~l~Q~~vp~~~~G~v~g~~~sl~~~~~ll~~~~~~~~  367 (412)
                      +++.-.+..+...+..+.+|+++||+++|...+..+...++...++..+
T Consensus       114 G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~ig~~lg~~l~~~l  162 (1146)
T PRK08633        114 GAQSAIYSPAKYGIIPELVGKENLSRANGLLEAFTIVAILAGTALFSFL  162 (1146)
T ss_pred             HHHHHhhchHHHhhhHHhcCcccchhhhhHHHHHHHHHHHHHHHHHHHH
Confidence            3344346677778899999999999999999999888666666665444

>PRK15462 dipeptide/tripeptide permease D; Provisional

Probab=97.63  E-value=0.0032  Score=65.85  Aligned_cols=153  Identities=12%  Similarity=0.082  Sum_probs=95.5

Q ss_pred             hHHHHHHH-hcCCCCchhHHHhhHHHHHHHHHHHHHHHHHHHh-chhhHHHHHHHHHHHHHHHHHHHHhcCCCcCcchHH
Q 015168          232 SLMTAFLT-QRGLNPSIIGGFSGLCASMGVAATFLSAYLVRRL-GILKAGAAGLIFQASLLAMAVAVYWSGSLSQQNPLL  309 (412)
Q Consensus       232 ~~~~~y~~-~~gls~~~~G~~~~~~avggllGt~l~~~l~~R~-g~~r~~~~~~~~~~~~l~~~v~~~~~g~~~~~~~~~  309 (412)
                      ...+.|+. ++|+|+.+.+.+.+.......++.++.+++.+|+ |++|+..++.....+....+  . ..+..   ....
T Consensus        30 ~~L~~yL~~~lgls~~~a~~i~~~~~~~~~l~~ligG~LaDRilGrrr~iliG~il~~lg~lll--~-~~~~~---~~~~  103 (493)
T PRK15462         30 ALLILYLTNQLKYDDNHAYELFSAYCSLVYVTPILGGFLADKVLGNRMAVMLGALLMAIGHVVL--G-ASEIH---PSFL  103 (493)
T ss_pred             HHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCcHHHHHHHHHHHHHHHHHH--H-Hhhcc---hhHH
Confidence            34778876 4799999999999999999999999999999999 99999888876544332211  1 11110   1111


Q ss_pred             HHHHHHHHhhhhhhhhhhhhhHHhhccCCcc--cchhHHHHHHHHHHHHHHHHHHHHHhccCCCchhHHHHHHHHHHHHH
Q 015168          310 FFLCLIVLSRLGHMSYDIVGAQILQTGIPSS--KANLIGTTEISVASLVESVMLGVAIIANDVSHFGFLATLSLLSVVGA  387 (412)
Q Consensus       310 l~~~g~~~sr~GLw~~dl~~~~l~Q~~vp~~--~~G~v~g~~~sl~~~~~ll~~~~~~~~~~~~~f~~l~~~s~~~v~~~  387 (412)
                      ....+....+.|+  +..+...+..|..|++  +|++..+...+..+....+.+.+.....+...+...-.++......+
T Consensus       104 ~l~l~li~iG~G~--~~~~~~alv~elfp~~~~~R~sgf~i~Y~~~nlG~~iap~l~g~L~~~~Gw~~~F~iaaigm~l~  181 (493)
T PRK15462        104 YLSLAIIVCGYGL--FKSNVSCLLGELYEPTDPRRDGGFSLMYAAGNVGSIIAPIACGYAQEEYSWAMGFGLAAVGMIAG  181 (493)
T ss_pred             HHHHHHHHHhccc--ccccHHHHHHHHCCCCCccccceehHHHHHHHHHHHHHHHHHHHHHhhhChHHHHHHHHHHHHHH
Confidence            1111222223454  3333445566666654  79999999999988877777777655544333333333333334444


Q ss_pred             HHHHH
Q 015168          388 AWMFC  392 (412)
Q Consensus       388 ~~~~~  392 (412)
                      ...|.
T Consensus       182 li~~~  186 (493)
T PRK15462        182 LVIFL  186 (493)
T ss_pred             HHHHH
Confidence            44443

>KOG0255 consensus Synaptic vesicle transporter SVOP and related transporters (major facilitator superfamily) [General function prediction only]

Probab=97.61  E-value=0.13  Score=53.92  Aligned_cols=313  Identities=12%  Similarity=0.075  Sum_probs=152.7

Q ss_pred             HHHHHhhhhhcchhccCCcHHHHHHHHHHHHHHHHHHHHHHHHHhccccccccchhHHHHHHH-HHHHHHHHHHhhhhhh
Q 015168            7 LILIVGGPLVGKLMDHSPRIPAYICLNTVQAAAQLLSAAMIIHAHTVIPTSSSMLLHPWFFVL-VLAGAVERLTGVALGV   85 (412)
Q Consensus         7 lp~ll~g~~~G~~vDr~~R~~v~~~~~~~q~~~v~~s~~~~~~~~~~~~~~~~~~~~~l~~~~-~~~g~~~~l~~~a~~~   85 (412)
                      +-.++-+...|.+.||++||+++.++.+.+.+.-.+++      +...      .  ..+.+. ++.|....-.......
T Consensus       129 ~G~~vG~~i~g~lsD~~GRk~~~~~~~~~~~i~~~~~a------~a~~------~--~~~~~~Rfl~G~~~~~~~~~~~~  194 (521)
T KOG0255|consen  129 LGVLVGSLIFGPLSDRFGRKPVLLVSLLLFIIFGILTA------FAPN------Y--WMFLIFRFLSGFFGSGPLTVGFG  194 (521)
T ss_pred             HHHHHHHhhheehHhhcccHHHHHHHHHHHHHHHHHHH------HhCc------H--HHHHHHHHHHHhhccchhHHhHh
Confidence            34455566678999999999999999887755422111      1110      1  222222 1222221111111111


Q ss_pred             hhcccceeeecCCCchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhcChhHHHHHHHHHHHHHHHHHHHHHHHhhhcc-
Q 015168           86 AVERDWAVLLAGINRPIALAKANAVLNRIDLLCEIAGASLFGILLSKYEPVTCLKFAAGLIMWSLPVMIILTWFTNKIS-  164 (412)
Q Consensus        86 ai~RDwv~~l~~~~~~~~L~~~Ns~l~~id~v~~llgP~lgG~L~~~~~~~~~~~~~~~~~~~s~~~~~~~l~~~~~~~-  164 (412)
                           ++..+++++   +...+.+. ...--.....+|..++.+..  +|+..+++......+.+..     +   .++ 
T Consensus       195 -----~~~E~~~~~---~R~~~~~~-~~~~~~~~~~~~~~~a~~~~--~Wr~~~~~~~~~~~~~~~~-----~---~l~~  255 (521)
T KOG0255|consen  195 -----LVAEIVSPK---QRGLALTL-GGFFFVGGLMLPAGAAYITR--DWRWLFWIISIPSGLFLLL-----W---FLPP  255 (521)
T ss_pred             -----hheeecCcc---hhhHHHHH-HHHHHHHHHHHHHHHHHHHh--hHHHHHHHHHHHHHHHHHH-----H---HccC
Confidence                 222367654   56666666 77777788999999999998  9998887654444433321     1   112 


Q ss_pred             ccccc----cccc--cccccCC-CCC-CCCCCchhhhHHh-----HHHH----HHhHHHHhcCCcchH-HHHHHHHHHHh
Q 015168          165 SGVLD----RAKC--SQSCCRT-SNE-GPVPDADNIVDVG-----IEAI----KLGWKEYMQQPVLPA-SLAYVLLCLNV  226 (412)
Q Consensus       165 ~~~l~----~~~~--~~~~~~~-~~~-~~~~~~~~~~~~~-----~~~~----~~g~~~~~~~~v~~~-~~~~a~l~~t~  226 (412)
                      | .++    +.+.  .++..++ .+. +...+..+..+..     .+..    ...+...++.|.++- .+...+.++..
T Consensus       256 E-s~rwl~~~g~~~~a~~~l~~~a~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~  334 (521)
T KOG0255|consen  256 E-SPRWLLSKGRIDEAIKILKKIAKLNGRKLSVKELLRLELLLRPLKLLFTEPKISFLDLFRTPRLRYRTLYLLFIWFVF  334 (521)
T ss_pred             c-ChHHHHHcCchHHHHHHHHHHHhhcCCCCCcHHHHHHHHHhhHhhhhccCCCCchhhhhcCHHHHHHHHHHHHHHHHH
Confidence            2 110    0000  0000000 000 0000000000000     0000    012455566664443 22222222221


Q ss_pred             hhccchHHHHHHHh---cCCCCchhHHHhhHHHHHHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHHhcCCCc
Q 015168          227 VLTPGSLMTAFLTQ---RGLNPSIIGGFSGLCASMGVAATFLSAYLVRRLGILKAGAAGLIFQASLLAMAVAVYWSGSLS  303 (412)
Q Consensus       227 v~~~~~~~~~y~~~---~gls~~~~G~~~~~~avggllGt~l~~~l~~R~g~~r~~~~~~~~~~~~l~~~v~~~~~g~~~  303 (412)
                       .     +..|...   .+++.. +.+.....+...+-+.+....+..|.|++.....+.....   +.+....+.....
T Consensus       335 -~-----~~y~gl~~~~~~lg~~-~~~~~~~~~~~~~p~~~~~~~~~~~~gR~~~~~~~~~~~~---~~~~~~~~~~~~~  404 (521)
T KOG0255|consen  335 -S-----LVYYGLSLNVSGLGGN-IYLNFTLSGLVELPAYFRNGLLLPEFGRRPPLFLSLFLAG---IGLLLFGWLPDDL  404 (521)
T ss_pred             -h-----HHHHhhhhhhhhcCch-HHHHHHHHHHHHhhHHHHHHHHHHHhCcHHHHHHHHHHHH---HHHHHHHHhhccc
Confidence             1     2233221   222222 4444445555667777777888999988777665554322   2222222221111


Q ss_pred             Cc-chHHHHHHHHHHhhhhhhhhhhhhhHHhhccCCcccchhHHHHHHHHHHHHHHHHHHHHHhc
Q 015168          304 QQ-NPLLFFLCLIVLSRLGHMSYDIVGAQILQTGIPSSKANLIGTTEISVASLVESVMLGVAIIA  367 (412)
Q Consensus       304 ~~-~~~~l~~~g~~~sr~GLw~~dl~~~~l~Q~~vp~~~~G~v~g~~~sl~~~~~ll~~~~~~~~  367 (412)
                      .. ....+...|-...  +. .++.. .+..-|..|..-|+.+.+..........++.+......
T Consensus       405 ~~~~~~~~~~~~~~~~--~~-~~~~~-~~~~~el~pt~~r~~~~~~~~~~~~~~~i~ap~~~~~~  465 (521)
T KOG0255|consen  405 GGWLHWILPLLGKFFI--GS-AFNLI-FLYSAELIPTVVRNTAVGAISAAARLGSILAPLFPLLL  465 (521)
T ss_pred             hhHHHHHHHHHHHHHH--HH-HHHHH-HHHHHhhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            00 1122222222222  22 44555 77778888999999999999999998777777666444

>PRK11273 glpT sn-glycerol-3-phosphate transporter; Provisional

Probab=97.60  E-value=0.0028  Score=65.20  Aligned_cols=114  Identities=15%  Similarity=0.063  Sum_probs=72.7

Q ss_pred             HHHHhcCCCCchhHHHhhHHHHHHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHHhcCCCcCcch--HHHHHH
Q 015168          236 AFLTQRGLNPSIIGGFSGLCASMGVAATFLSAYLVRRLGILKAGAAGLIFQASLLAMAVAVYWSGSLSQQNP--LLFFLC  313 (412)
Q Consensus       236 ~y~~~~gls~~~~G~~~~~~avggllGt~l~~~l~~R~g~~r~~~~~~~~~~~~l~~~v~~~~~g~~~~~~~--~~l~~~  313 (412)
                      .|+.+.|+|+.++|+..+...++..++....+++.+|+|+++...++.....+....+  .+.+...+....  ...++.
T Consensus        53 p~l~~~g~s~~~~g~~~~~~~i~~~~~~~~~G~l~Dr~g~k~~l~~~~~~~~i~~~~~--~~~~~~~~~~~~~~~~~~l~  130 (452)
T PRK11273         53 PYLVEQGFSRGDLGFALSGISIAYGFSKFIMGSVSDRSNPRVFLPAGLILAAAVMLFM--GFVPWATSSIAVMFVLLFLC  130 (452)
T ss_pred             HHHHHcCCCHHHHHHHHHHHHHHHHHHHhhhhhhhhccCCchhHHHHHHHHHHHHHHH--HhhhcccccHHHHHHHHHHH
Confidence            3554449999999999999999999999999999999999998877765333222211  211100000011  111222


Q ss_pred             HHHHhhhhhhhhhhhhhHHhhccCCcccchhHHHHHHHHHHHH
Q 015168          314 LIVLSRLGHMSYDIVGAQILQTGIPSSKANLIGTTEISVASLV  356 (412)
Q Consensus       314 g~~~sr~GLw~~dl~~~~l~Q~~vp~~~~G~v~g~~~sl~~~~  356 (412)
                      |+.   .|.  ..........+..|+++||+..|..+......
T Consensus       131 gi~---~g~--~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g  168 (452)
T PRK11273        131 GWF---QGM--GWPPCGRTMVHWWSQKERGGIVSVWNCAHNVG  168 (452)
T ss_pred             HHH---Hhc--cchHHHHHHHHhCChHHHHHHHHHHHHHHHhh
Confidence            332   122  22333455667789999999999987776654

>TIGR00879 SP MFS transporter, sugar porter (SP) family

Probab=97.57  E-value=0.0028  Score=64.14  Aligned_cols=131  Identities=12%  Similarity=0.042  Sum_probs=85.6

Q ss_pred             CCCchhHHHhhHHHHHHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHHhcCCCcCcchHHHHHHHHHHhhhhh
Q 015168          243 LNPSIIGGFSGLCASMGVAATFLSAYLVRRLGILKAGAAGLIFQASLLAMAVAVYWSGSLSQQNPLLFFLCLIVLSRLGH  322 (412)
Q Consensus       243 ls~~~~G~~~~~~avggllGt~l~~~l~~R~g~~r~~~~~~~~~~~~l~~~v~~~~~g~~~~~~~~~l~~~g~~~sr~GL  322 (412)
                      .++.+.|+..+...++..++....+++.+|+|+++....+..........+  .+....    .....+..+-++.++|.
T Consensus        68 ~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~grr~~~~~~~~~~~~~~~~~--~~~~~~----~~~~~~~~~r~l~G~~~  141 (481)
T TIGR00879        68 YSSSLWGLVVSIFLVGGFIGALFAGWLSDRFGRKKSLLIIALLFVIGAILM--GLAAFA----LSVEMLIVGRVLLGIGV  141 (481)
T ss_pred             CChhHHHHHHHHHHHHHHHHHHHhhHhhhhhhhHHHHHHHHHHHHHHHHHH--HHhccc----cchHHHHHHHHHHHhhh
Confidence            448999999999999999999999999999999998877765433322222  111111    11111112223333344


Q ss_pred             hhhhhhhhHHhhccCCcccchhHHHHHHHHHHHHHHHHHHHH---HhccCCCchhHHHHH
Q 015168          323 MSYDIVGAQILQTGIPSSKANLIGTTEISVASLVESVMLGVA---IIANDVSHFGFLATL  379 (412)
Q Consensus       323 w~~dl~~~~l~Q~~vp~~~~G~v~g~~~sl~~~~~ll~~~~~---~~~~~~~~f~~l~~~  379 (412)
                      -........+..+..|+++||++.+..++....-..+...+.   ....+...+.+...+
T Consensus       142 ~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~w~~~f~~  201 (481)
T TIGR00879       142 GIASALVPMYLSEIAPKALRGALTSLYQLAITFGILVAYGFGSGKVSLNNTLGWRIPLGL  201 (481)
T ss_pred             hHHHhHHHHHHHccCChhhhhhhhhHHHHHHHHHHHHHHHHHHHhhcCCCCccHHHHHHH
Confidence            345566777889999999999999999888877666666655   343333344433333

This model represent the sugar porter subfamily of the major facilitator superfamily (pfam00083)

>PRK15403 multidrug efflux system protein MdtM; Provisional

Probab=97.56  E-value=0.0058  Score=62.26  Aligned_cols=122  Identities=14%  Similarity=0.072  Sum_probs=80.0

Q ss_pred             HHHhcCCCCchhHHHhhHHHHHHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHHhcCCCcCcchHHHHHHHHH
Q 015168          237 FLTQRGLNPSIIGGFSGLCASMGVAATFLSAYLVRRLGILKAGAAGLIFQASLLAMAVAVYWSGSLSQQNPLLFFLCLIV  316 (412)
Q Consensus       237 y~~~~gls~~~~G~~~~~~avggllGt~l~~~l~~R~g~~r~~~~~~~~~~~~l~~~v~~~~~g~~~~~~~~~l~~~g~~  316 (412)
                      ..+++|.|+...++..++..+++.++.+..+++.+|+|++|...++.....++...+  .. ..+   ....+   .+-+
T Consensus        42 i~~~~~~~~~~~~~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~--~~-a~~---~~~l~---~~r~  112 (413)
T PRK15403         42 VVRDFNADVSLAPASVSLYLAGGMALQWLLGPLSDRIGRRPVLITGALIFTLACAAT--LF-TTS---MTQFL---IARF  112 (413)
T ss_pred             HHHHhCCCHHHHHHHHHHHHHHHHHHHHhhhHHHHHcCchHHHHHHHHHHHHHHHHH--HH-cCC---HHHHH---HHHH
Confidence            345789999999999999999999999999999999999998887765433222222  21 211   11111   1111


Q ss_pred             HhhhhhhhhhhhhhHHhhccCCcccchhHHHHHHHHHHHHHHHHHHHHHhc
Q 015168          317 LSRLGHMSYDIVGAQILQTGIPSSKANLIGTTEISVASLVESVMLGVAIIA  367 (412)
Q Consensus       317 ~sr~GLw~~dl~~~~l~Q~~vp~~~~G~v~g~~~sl~~~~~ll~~~~~~~~  367 (412)
                      +.++|.-..........++..|++++++..+...+.......+...++...
T Consensus       113 l~Gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~lg~~l  163 (413)
T PRK15403        113 IQGTSICFIATVGYVTVQEAFGQTKGIKLMAIITSIVLVAPIIGPLSGAAL  163 (413)
T ss_pred             HHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            122222112223345567778999999999998888877666666665443

>PRK11902 ampG muropeptide transporter; Reviewed

Probab=97.56  E-value=0.004  Score=62.94  Aligned_cols=127  Identities=20%  Similarity=0.097  Sum_probs=80.8

Q ss_pred             HHHHHHHhcCCCCchhHHHhhHHHHHHHHHHHHHHHHHHHh-----chhhH-HHHHHHHHHHHHHHHHHHHhcCCCcCcc
Q 015168          233 LMTAFLTQRGLNPSIIGGFSGLCASMGVAATFLSAYLVRRL-----GILKA-GAAGLIFQASLLAMAVAVYWSGSLSQQN  306 (412)
Q Consensus       233 ~~~~y~~~~gls~~~~G~~~~~~avggllGt~l~~~l~~R~-----g~~r~-~~~~~~~~~~~l~~~v~~~~~g~~~~~~  306 (412)
                      ..+.|++++|+|.+++|++...+..  .....+.+++.+|+     |++|. +.++...   +.+.........+... .
T Consensus        21 ~~~~~l~~~g~~~~~ig~~~~~~~~--~~~~~l~g~~~Dr~~~~~~g~rr~~l~~~~~~---~~l~~~~l~~~~~~~~-~   94 (402)
T PRK11902         21 TLQAWMTVEGLDIQTIGFFSLVGQA--YIFKFLWAPLMDRYTPPLLGRRRGWLLLTQVG---LAASIAAMAFCPPHAA-L   94 (402)
T ss_pred             HHHHHHHHcCCCHHHHHHHHHHHHH--HHHHHHHHHHHHcccccCCCcchhHHHHHHHH---HHHHHHHHHhcCccch-H
Confidence            5788999999999999999877776  58889999999999     77653 4443332   2111111122111111 1


Q ss_pred             hHHHHHHHHHHhhhhhhhhhhhhhHHhhccCCcccchhHHHHHHHHHHHHHHHHHHHHHhc
Q 015168          307 PLLFFLCLIVLSRLGHMSYDIVGAQILQTGIPSSKANLIGTTEISVASLVESVMLGVAIIA  367 (412)
Q Consensus       307 ~~~l~~~g~~~sr~GLw~~dl~~~~l~Q~~vp~~~~G~v~g~~~sl~~~~~ll~~~~~~~~  367 (412)
                      . .++..+++.+ ..--..|.+...+.-|.+|+++||+.++.+..-+....++...+....
T Consensus        95 ~-~l~~~~~~~~-~~~~~~~~~~~al~~~~~~~~~r~~~~~~~~~g~~~g~i~g~~l~~~l  153 (402)
T PRK11902         95 W-PLAGLAVLVA-FLSASQDIVFDAYSTDVLHPEERGAGAAVKVLGYRLAMLVSGGLALWL  153 (402)
T ss_pred             H-HHHHHHHHHH-HHHHHHHHHHHHHHHHhcChhhhhHHHHHHHHHHHHHHHHHhHHHHHH
Confidence            1 1122222222 223357888889999999999999999999987776555555444333

>TIGR00894 2A0114euk Na(+)-dependent inorganic phosphate cotransporter

Probab=97.52  E-value=0.0017  Score=66.86  Aligned_cols=121  Identities=11%  Similarity=0.034  Sum_probs=80.8

Q ss_pred             hcCCCCchhHHHhhHHHHHHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHHhcCCCcCcchHHHHHHHHHHhh
Q 015168          240 QRGLNPSIIGGFSGLCASMGVAATFLSAYLVRRLGILKAGAAGLIFQASLLAMAVAVYWSGSLSQQNPLLFFLCLIVLSR  319 (412)
Q Consensus       240 ~~gls~~~~G~~~~~~avggllGt~l~~~l~~R~g~~r~~~~~~~~~~~~l~~~v~~~~~g~~~~~~~~~l~~~g~~~sr  319 (412)
                      ++|+++...|++.+...++.+++....+++.+|+|.++...++.....+....+  ...... + ...  ++. .-++.+
T Consensus        70 ~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~g~r~~l~~~~~~~~~~~~~~--~~~~~~-~-~~~--l~~-~r~~~G  142 (465)
T TIGR00894        70 NFKWSGALQGLILSSHFYGQIIIQIPVGYLAGKYVFKWSIGIGMFLSSVISIVI--PWAAGG-G-IAL--VVF-CRVIQG  142 (465)
T ss_pred             CCCCCHHHhhHHHHHHHHHHHHHHcchHHHHHHhCcchhhHHHHHHHHHHHHHH--HHHHHc-C-chH--HHH-HHHHHH
Confidence            578999999999999999999999999999999999998877665322221111  111101 0 111  111 111122


Q ss_pred             hhhhhhhhhhhHHhhccCCcccchhHHHHHHHHHHHHHHHHHHHHHhc
Q 015168          320 LGHMSYDIVGAQILQTGIPSSKANLIGTTEISVASLVESVMLGVAIIA  367 (412)
Q Consensus       320 ~GLw~~dl~~~~l~Q~~vp~~~~G~v~g~~~sl~~~~~ll~~~~~~~~  367 (412)
                      ++--........+..+..|+++||+++|...+.......+...+....
T Consensus       143 ~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~i~~~l~~~l  190 (465)
T TIGR00894       143 LAQGSVSPATHKIIVKWAPPKERSRLLGMSTSGFQLGTFIFLPISGWL  190 (465)
T ss_pred             HhcccchhhHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            233234456777888999999999999999997777665555554444

>TIGR00901 2A0125 AmpG-related permease

Probab=97.51  E-value=0.006  Score=60.25  Aligned_cols=126  Identities=15%  Similarity=0.059  Sum_probs=76.5

Q ss_pred             HHHHHHHhcCCCCchhHHHhhHHHHHHHHHHHHHHHHHHHh-----chhhHHH-HHHHHHHHHHHHHHHHHhcCCCcCcc
Q 015168          233 LMTAFLTQRGLNPSIIGGFSGLCASMGVAATFLSAYLVRRL-----GILKAGA-AGLIFQASLLAMAVAVYWSGSLSQQN  306 (412)
Q Consensus       233 ~~~~y~~~~gls~~~~G~~~~~~avggllGt~l~~~l~~R~-----g~~r~~~-~~~~~~~~~l~~~v~~~~~g~~~~~~  306 (412)
                      ..+.+.+++|+|.+++|+.... .....+ .++.+++.+|+     |++|... .+.....++  .....+..+..   .
T Consensus        10 ~~~~~~~~~g~s~~~~g~~~~~-~~~~~~-~~~~g~~~Dr~~~~~~Grr~~~l~~~~~~~~~~--~~~l~~~~~~~---~   82 (356)
T TIGR00901        10 TLPYWLRSKNVSLKTIGFFSLV-GLPYSL-KFLWSPLVDTVYLPFFGRRRSWLVLTQVLLLSL--LLILSFLVPST---D   82 (356)
T ss_pred             HHHHHHHHcCCCHHHHHHHHHH-HHHHHH-HHHHHHHHhcccCCCCCccHHHHHHHHHHHHHH--HHHHHcCCcch---h
Confidence            3667788999999999999655 333333 77888888887     7777643 333221111  11112222211   1


Q ss_pred             hHHHHHHHHHHhhhhhhhhhhhhhHHhhccCCcccchhHHHHHHHHHHHHHHHHHHHHHh
Q 015168          307 PLLFFLCLIVLSRLGHMSYDIVGAQILQTGIPSSKANLIGTTEISVASLVESVMLGVAII  366 (412)
Q Consensus       307 ~~~l~~~g~~~sr~GLw~~dl~~~~l~Q~~vp~~~~G~v~g~~~sl~~~~~ll~~~~~~~  366 (412)
                      ...+...++... .+--..|.+...+.-|.+|+++||++++.+.+-.....++...++..
T Consensus        83 l~~l~~~~~~~~-~~~~~~~~~~~a~~~~~~~~~~r~~~~~~~~~~~~~G~~~~~~l~~~  141 (356)
T TIGR00901        83 LPLLAGLAFLIA-FFSATQDIALDAWRLEILSDEELGYGSTIYIVGYRAGMLLSGSLALV  141 (356)
T ss_pred             HHHHHHHHHHHH-HHHHHHHHHHHHHHHHhCCHhhhchHHHHHHHHHHHHHHHHHHHHHH
Confidence            111111122221 22235788889999999999999999999988777766555555433

>PLN00028 nitrate transmembrane transporter; Provisional

Probab=97.51  E-value=0.007  Score=62.93  Aligned_cols=110  Identities=13%  Similarity=0.024  Sum_probs=71.8

Q ss_pred             HHHHHhcCCCCchhHHHhhHHHHHHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHHhcCCCcCcchHH--HHH
Q 015168          235 TAFLTQRGLNPSIIGGFSGLCASMGVAATFLSAYLVRRLGILKAGAAGLIFQASLLAMAVAVYWSGSLSQQNPLL--FFL  312 (412)
Q Consensus       235 ~~y~~~~gls~~~~G~~~~~~avggllGt~l~~~l~~R~g~~r~~~~~~~~~~~~l~~~v~~~~~g~~~~~~~~~--l~~  312 (412)
                      ..+.+++|+|+.++|...+...++.+.+.++.+++.+|+|+++...++.....+....  ..+.. +   ....+  -++
T Consensus        60 ~~l~~~~gls~~~~g~~~~~~~~~~~~~~~~~G~l~dr~G~r~~~~~~~~~~~~~~~~--~~~~~-s---~~~l~~~r~l  133 (476)
T PLN00028         60 PIIRDNLNLTKSDIGNAGIASVSGSIFSRLAMGPVCDLYGPRYGSAFLLMLTAPAVFC--MSLVS-S---ATGFIAVRFF  133 (476)
T ss_pred             HHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHH--HHHhc-C---HHHHHHHHHH
Confidence            3445679999999999999999999999999999999999998877665432222111  12221 1   11111  122


Q ss_pred             HHHHHhhhhhhhhhhhhhHHhhccCCcccchhHHHHHHHHHHHH
Q 015168          313 CLIVLSRLGHMSYDIVGAQILQTGIPSSKANLIGTTEISVASLV  356 (412)
Q Consensus       313 ~g~~~sr~GLw~~dl~~~~l~Q~~vp~~~~G~v~g~~~sl~~~~  356 (412)
                      .|+     |...+ ........+..|+++||+++|+.++..+..
T Consensus       134 ~G~-----~~~~~-~~~~~~i~~~~~~~~rg~a~g~~~~~~~~g  171 (476)
T PLN00028        134 IGF-----SLATF-VSCQYWMSTMFNGKIVGTANGIAAGWGNLG  171 (476)
T ss_pred             HHH-----HHHhh-HHHHHHHHHhcChhheeHHHHHHHHHHHHH
Confidence            232     22122 223345667789999999999988766553

>TIGR00899 2A0120 sugar efflux transporter

Probab=97.48  E-value=0.0079  Score=59.38  Aligned_cols=52  Identities=25%  Similarity=0.200  Sum_probs=44.3

Q ss_pred             cchHHHHHHH-hcCCCCchhHHHhhHHHHHHHHHHHHHHHHHHHhchhhHHHH
Q 015168          230 PGSLMTAFLT-QRGLNPSIIGGFSGLCASMGVAATFLSAYLVRRLGILKAGAA  281 (412)
Q Consensus       230 ~~~~~~~y~~-~~gls~~~~G~~~~~~avggllGt~l~~~l~~R~g~~r~~~~  281 (412)
                      .......|+. ++|.|+.+.|++.+...+.+++.+...+++.+|+|++|....
T Consensus        16 ~~~~l~~~l~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~Dr~g~r~~~~~   68 (375)
T TIGR00899        16 QFPTLSLFLSEEVRARPAMIGLFYTGSAIVGIAVSQLLATRSDYQGDRKGLIL   68 (375)
T ss_pred             HhhHHHHHHHcccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCchHHHH
Confidence            3445667775 689999999999999999999999999999999999887554

This family of proteins is an efflux system for lactose, glucose, aromatic glucosides and galactosides, cellobiose, maltose, a-methyl glucoside and other sugar compounds. They are found in both gram-negative and gram-postitive bacteria.

>PRK15011 sugar efflux transporter B; Provisional

Probab=97.40  E-value=0.014  Score=58.89  Aligned_cols=51  Identities=22%  Similarity=0.217  Sum_probs=37.4

Q ss_pred             cchHHHHHHH-hcCCCCchhHHHhhHHHH-HHHHHHHHHHHHHHHhchhhHHHH
Q 015168          230 PGSLMTAFLT-QRGLNPSIIGGFSGLCAS-MGVAATFLSAYLVRRLGILKAGAA  281 (412)
Q Consensus       230 ~~~~~~~y~~-~~gls~~~~G~~~~~~av-ggllGt~l~~~l~~R~g~~r~~~~  281 (412)
                      +......|++ ++|.|++++|+..+...+ +.+.+.+..++ .+|+|++|....
T Consensus        34 ~~p~~~~~l~~~~~~s~~~~g~~~~~~~~~~~~~~~~~~~~-~dr~g~r~~~~~   86 (393)
T PRK15011         34 QTPTLSIFLTDEVHARPAMVGFFFTGSAVIGILVSQFLAGR-SDKRGDRKSLIV   86 (393)
T ss_pred             HHHHHHHHHHhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHH-HhcccchhHHHH
Confidence            3445677775 589999999999877655 55555655566 899999887543

>PRK10077 xylE D-xylose transporter XylE; Provisional

Probab=97.40  E-value=0.0058  Score=62.87  Aligned_cols=122  Identities=10%  Similarity=0.016  Sum_probs=78.2

Q ss_pred             cCCCCchhHHHhhHHHHHHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHH-Hh-c--CCCcCcchHHHHHHHHH
Q 015168          241 RGLNPSIIGGFSGLCASMGVAATFLSAYLVRRLGILKAGAAGLIFQASLLAMAVAV-YW-S--GSLSQQNPLLFFLCLIV  316 (412)
Q Consensus       241 ~gls~~~~G~~~~~~avggllGt~l~~~l~~R~g~~r~~~~~~~~~~~~l~~~v~~-~~-~--g~~~~~~~~~l~~~g~~  316 (412)
                      +|.++.+.|+..+...++..+|+.+.+++.+|+|++|+...+.....++...+... +. .  ...+ ......+..+=+
T Consensus        50 ~~~~~~~~~~~~s~~~ig~~~~~~~~G~l~dr~Grr~~~~~~~~l~~i~~~~~~~~~~~~~~~~~~~-~~~~~~l~~~R~  128 (479)
T PRK10077         50 ESAANSLLGFCVASALIGCIIGGALGGYCSNRFGRRDSLKIAAVLFFISALGSAWPEFGFTSIGPDN-TGYVPEFVIYRI  128 (479)
T ss_pred             ccCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHhhccccccccccc-hhHHHHHHHHHH
Confidence            48999999999999999999999999999999999999888766533332222111 00 0  0000 111111112222


Q ss_pred             HhhhhhhhhhhhhhHHhhccCCcccchhHHHHHHHHHHHHHHHHHHH
Q 015168          317 LSRLGHMSYDIVGAQILQTGIPSSKANLIGTTEISVASLVESVMLGV  363 (412)
Q Consensus       317 ~sr~GLw~~dl~~~~l~Q~~vp~~~~G~v~g~~~sl~~~~~ll~~~~  363 (412)
                      +.++|.-........+..|..|+++||++.+........-.++.+..
T Consensus       129 l~G~~~g~~~~~~~~~i~e~~~~~~rg~~~~~~~~~~~~G~~~~~~~  175 (479)
T PRK10077        129 IGGIGVGLASMLSPMYIAEIAPAHIRGKLVSFNQFAIIFGQLVVYFV  175 (479)
T ss_pred             HHhhhHhHHhhHHHHHHHhhCChhhhhHHHHHHHHHHHHHHHHHHHH
Confidence            22333333445666678899999999999999876655544444443

>TIGR00806 rfc RFC reduced folate carrier

Probab=97.36  E-value=0.01  Score=61.48  Aligned_cols=149  Identities=9%  Similarity=0.019  Sum_probs=101.0

Q ss_pred             HHHHHH-hcCCCCch-hHHHhhHHHHHHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHHhcCCCcCcchHHHH
Q 015168          234 MTAFLT-QRGLNPSI-IGGFSGLCASMGVAATFLSAYLVRRLGILKAGAAGLIFQASLLAMAVAVYWSGSLSQQNPLLFF  311 (412)
Q Consensus       234 ~~~y~~-~~gls~~~-~G~~~~~~avggllGt~l~~~l~~R~g~~r~~~~~~~~~~~~l~~~v~~~~~g~~~~~~~~~l~  311 (412)
                      ...|+. ++|+++++ +|.+.+....+..+.-+..+++..|+|.++.+.++.....++-.+.  .+.. +.. ...+.=+
T Consensus        48 a~p~L~~elglT~~qv~G~I~s~F~ysYal~qIp~GlLaDrlG~K~vL~l~~l~Wsl~t~L~--~fa~-Sl~-~L~i~R~  123 (511)
T TIGR00806        48 ITPYLLTVLNFTEETVTNEIIPVLPYSHLAVLVPVFLLTDYLRYKPVLVLQALSFVCVWLLL--LLGT-SVW-HMQLMEV  123 (511)
T ss_pred             HHHHHHHHcCCCHHHhcchHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHH--HHHH-HHH-HHHHHHH
Confidence            445664 79999999 9999999999999999999999999999998877665433222221  1111 100 0001111


Q ss_pred             HHHHHHhhhhhhhhhhhhhHHhhccCCcccchhHHHHHHHHHHHHHHHHHHHHH--hccCCCchhHHHHHHHHHHHHHHH
Q 015168          312 LCLIVLSRLGHMSYDIVGAQILQTGIPSSKANLIGTTEISVASLVESVMLGVAI--IANDVSHFGFLATLSLLSVVGAAW  389 (412)
Q Consensus       312 ~~g~~~sr~GLw~~dl~~~~l~Q~~vp~~~~G~v~g~~~sl~~~~~ll~~~~~~--~~~~~~~f~~l~~~s~~~v~~~~~  389 (412)
                      +.|+.-   |.  . .+...+.-..+|+++|+|++|..++-...-..+...++.  ..-+...+..+-.+|.+++..+..
T Consensus       124 llGvaE---A~--~-~A~~syI~~WfP~kER~ratsi~~sg~~vG~~Ia~~L~qll~s~gWr~y~~Ln~Isl~s~~~a~~  197 (511)
T TIGR00806       124 FYSVTM---AA--R-IAYSSYIFSLVPPSRYQRAAAYSRAAVLLGVFLSSVLGQLLVTLGWISYSTLNIISLVFMTFSVF  197 (511)
T ss_pred             HHHHHH---HH--H-HHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHH
Confidence            222211   22  2 278888999999999999999999988875555554432  223566777888889888776655


Q ss_pred             HHH
Q 015168          390 MFC  392 (412)
Q Consensus       390 ~~~  392 (412)
                      .-+
T Consensus       198 ~a~  200 (511)
T TIGR00806       198 LAL  200 (511)
T ss_pred             HHH
Confidence            443

Proteins of the RFC family are so-far restricted to animals. RFC proteins possess 12 putative transmembrane a-helical spanners (TMSs) and evidence for a 12 TMS topology has been published for the human RFC. The RFC transporters appear to transport reduced folate by an energy-dependent, pH-dependent, Na+-independent mechanism. Folate:H+ symport, folate:OH- antiport and folate:anion antiport mechanisms have been proposed, but the energetic mechanism is not well defined.

>TIGR00887 2A0109 phosphate:H+ symporter

Probab=97.29  E-value=0.01  Score=61.99  Aligned_cols=120  Identities=14%  Similarity=0.034  Sum_probs=80.3

Q ss_pred             CCCCchhHHHhhHHHHHHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHHhcCCCcCcchHHHHHHHHHHhhhh
Q 015168          242 GLNPSIIGGFSGLCASMGVAATFLSAYLVRRLGILKAGAAGLIFQASLLAMAVAVYWSGSLSQQNPLLFFLCLIVLSRLG  321 (412)
Q Consensus       242 gls~~~~G~~~~~~avggllGt~l~~~l~~R~g~~r~~~~~~~~~~~~l~~~v~~~~~g~~~~~~~~~l~~~g~~~sr~G  321 (412)
                      +.++...+++.+...++.++|+++.+++.+|+|+++...++.....++...+  .+.... ........+..+-++.++|
T Consensus        52 ~~~~~~~~~~~~~~~ig~~ig~~~~g~l~d~~Grr~~~~~~~~~~~v~~~~~--~~~~~~-~~~~~~~~~~~~r~l~G~~  128 (502)
T TIGR00887        52 PLPSSVSAAVNGSASIGTLAGQLFFGWLADKLGRKRVYGMELIIMIIATVAS--GLSPGS-SPKSVMATLCFWRFWLGVG  128 (502)
T ss_pred             cchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHH--HHccCc-ccchHHHHHHHHHHHHHHH
Confidence            4566678999999999999999999999999999999887765444333222  221211 0111122233333344445


Q ss_pred             hhhhhhhhhHHhhccCCcccchhHHHHHHHHHHHHHHHHHHHH
Q 015168          322 HMSYDIVGAQILQTGIPSSKANLIGTTEISVASLVESVMLGVA  364 (412)
Q Consensus       322 Lw~~dl~~~~l~Q~~vp~~~~G~v~g~~~sl~~~~~ll~~~~~  364 (412)
                      .-........+..|..|+++||++.+.....+....++...+.
T Consensus       129 ~g~~~~~~~~~~~e~~p~~~Rg~~~~~~~~~~~~g~~~g~~~~  171 (502)
T TIGR00887       129 IGGDYPLSAIITSEFATKKWRGAMMAAVFAMQGFGILAGAIVA  171 (502)
T ss_pred             HhhhhHHHHHHHHHhcChhhHHHHHHHHHHHHHHHHHHHHHHH
Confidence            5335566778899999999999999998888776554444443

This model represents the phosphate uptake symporter subfamily of the major facilitator superfamily (pfam00083).

>PRK06814 acylglycerophosphoethanolamine acyltransferase; Provisional

Probab=97.28  E-value=0.014  Score=67.15  Aligned_cols=116  Identities=9%  Similarity=-0.018  Sum_probs=76.9

Q ss_pred             chhHHHhhHHHHHHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHHhcCCCcCcchHHHHHHHHHHhhhhhhhh
Q 015168          246 SIIGGFSGLCASMGVAATFLSAYLVRRLGILKAGAAGLIFQASLLAMAVAVYWSGSLSQQNPLLFFLCLIVLSRLGHMSY  325 (412)
Q Consensus       246 ~~~G~~~~~~avggllGt~l~~~l~~R~g~~r~~~~~~~~~~~~l~~~v~~~~~g~~~~~~~~~l~~~g~~~sr~GLw~~  325 (412)
                      ..+++..++..+..++.+.+.+++..|+|++|.+.+.......+.......+...+    .  ..+....++.+++--.+
T Consensus        52 ~~~~l~~~~~~l~~~l~~~~~G~laDr~~rk~~~~~~~~~~~~~~~~~~~~~~~~s----~--~~l~~~~~l~gi~~a~~  125 (1140)
T PRK06814         52 ALVTLAGAVFILPFFIFSALAGQLADKYDKAKLAKILKFAEIGIAALAIYGFHLNS----V--PLLFAALFLMGIHSALF  125 (1140)
T ss_pred             HHHHHHHHHHHHHHHHHhhhHHhhhhhccHHHHHHHHHHHHHHHHHHHHHHHHHhh----H--HHHHHHHHHHHHHHHhh
Confidence            45788888999999999999999999999988764433322222222222222111    1  11112223333343346


Q ss_pred             hhhhhHHhhccCCcccchhHHHHHHHHHHHHHHHHHHHHHhc
Q 015168          326 DIVGAQILQTGIPSSKANLIGTTEISVASLVESVMLGVAIIA  367 (412)
Q Consensus       326 dl~~~~l~Q~~vp~~~~G~v~g~~~sl~~~~~ll~~~~~~~~  367 (412)
                      ..+...++-+.+|++++++++|...+..++..++...++...
T Consensus       126 ~p~~~a~l~~~~~~~~~~~a~~~~~~~~~ig~~igp~l~g~l  167 (1140)
T PRK06814        126 GPIKYSILPDHLNKDELLGANALVEAGTFIAILLGTIIGGLA  167 (1140)
T ss_pred             chHHHHhhHhhcCccccchhhHHHHHHHHHHHHHHHHHHHHH
Confidence            677788888889999999999999999998777766665544

>KOG4332 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]

Probab=97.26  E-value=0.03  Score=53.72  Aligned_cols=141  Identities=11%  Similarity=0.010  Sum_probs=76.3

Q ss_pred             HhHHHHHHhHHHHhcCCcchH-HHHHHHHHHHhhhccchHHHHH--HHhcCCC----CchhHHHhhHHHHHHHHHHHHHH
Q 015168          195 VGIEAIKLGWKEYMQQPVLPA-SLAYVLLCLNVVLTPGSLMTAF--LTQRGLN----PSIIGGFSGLCASMGVAATFLSA  267 (412)
Q Consensus       195 ~~~~~~~~g~~~~~~~~v~~~-~~~~a~l~~t~v~~~~~~~~~y--~~~~gls----~~~~G~~~~~~avggllGt~l~~  267 (412)
                      ...++.+.+.+-...++...- +.. -.+       |.+.++.|  +-+--+|    +.-.|.+++.--...++|+-++.
T Consensus       232 dlltqf~gaa~aiaSD~ki~LLG~i-qsL-------FE~smytFVFLWTPaLspn~e~iPhGfiFatFMlASmLGSSla~  303 (454)
T KOG4332|consen  232 DLLTQFKGAARAIASDEKIALLGAI-QSL-------FEGSMYTFVFLWTPALSPNDEEIPHGFIFATFMLASMLGSSLAS  303 (454)
T ss_pred             HHHHHhhHhHHHHhcchHHHHHHHH-HHH-------HhhhhheeeeeecccCCCCcccCCchhHHHHHHHHHHHhhHHHH
Confidence            355667777777777654322 211 112       22223322  2121222    23368899988899999999999


Q ss_pred             HHHHHhc--hhhHHHHHHHHHHHHHHHHHH--HHhcCCCcCcchHHHHHHHHHHhhhhhhhhhhhhhHHhhccCCcccch
Q 015168          268 YLVRRLG--ILKAGAAGLIFQASLLAMAVA--VYWSGSLSQQNPLLFFLCLIVLSRLGHMSYDIVGAQILQTGIPSSKAN  343 (412)
Q Consensus       268 ~l~~R~g--~~r~~~~~~~~~~~~l~~~v~--~~~~g~~~~~~~~~l~~~g~~~sr~GLw~~dl~~~~l~Q~~vp~~~~G  343 (412)
                      |+..|-.  ......+........+.+.+.  ...|+..++.-.  +.....+=+..|+  |=.+...++.+.+||+.|.
T Consensus       304 Rl~s~s~~~ve~ymqivf~vs~a~l~Lpilt~~vsP~kes~~~s--~i~F~~~E~cvGl--fwPSimkmRsqyIPEears  379 (454)
T KOG4332|consen  304 RLLSRSSPKVESYMQIVFLVSIAALLLPILTSSVSPSKESPSES--LIGFCLFEACVGL--FWPSIMKMRSQYIPEEARS  379 (454)
T ss_pred             HHHhcCCcccchHHHHHHHHHHHHHHHHHHHhccCCCcCCchHH--HHHHHHHHHHHhh--cchHHHHHHHhhCCHHHHh
Confidence            9976544  445555544432222222222  222332111112  2222333345576  6678899999999999997


Q ss_pred             hHHH
Q 015168          344 LIGT  347 (412)
Q Consensus       344 ~v~g  347 (412)
                      .+.-
T Consensus       380 timN  383 (454)
T KOG4332|consen  380 TIMN  383 (454)
T ss_pred             hhhh
Confidence            7643

>PRK15034 nitrate/nitrite transport protein NarU; Provisional

Probab=97.24  E-value=0.027  Score=58.44  Aligned_cols=117  Identities=9%  Similarity=0.012  Sum_probs=73.4

Q ss_pred             cchHHHHHHH-hcCCCCchhHHHhhHHHHHHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHH-HHhcCCCcCcch
Q 015168          230 PGSLMTAFLT-QRGLNPSIIGGFSGLCASMGVAATFLSAYLVRRLGILKAGAAGLIFQASLLAMAVA-VYWSGSLSQQNP  307 (412)
Q Consensus       230 ~~~~~~~y~~-~~gls~~~~G~~~~~~avggllGt~l~~~l~~R~g~~r~~~~~~~~~~~~l~~~v~-~~~~g~~~~~~~  307 (412)
                      ++.+.+.+.+ ++|+|++++|++.++..+++-++-+..+++.+|+|.+|...++.....   +.... .+......+...
T Consensus        53 ~~~l~~~~~~~~~~ls~~q~g~l~ai~~l~~al~rip~G~l~Dr~G~R~v~~~~~ll~~---i~~~~~~~a~~~~~~s~~  129 (462)
T PRK15034         53 FSAVTVNLNKIGFNFTTDQLFLLTALPSVSGALLRVPYSFMVPIFGGRRWTVFSTAILI---IPCVWLGIAVQNPNTPFG  129 (462)
T ss_pred             HHHHHHHhhhhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHH---HHHHHHHHHHcccCCCHH
Confidence            3334444445 699999999999999999999999999999999999998887765322   22212 221100000011


Q ss_pred             HH---HHHHHHHHhhhhhhhhhhhhhHHhhccCCcccchhHHHHHHHHHHH
Q 015168          308 LL---FFLCLIVLSRLGHMSYDIVGAQILQTGIPSSKANLIGTTEISVASL  355 (412)
Q Consensus       308 ~~---l~~~g~~~sr~GLw~~dl~~~~l~Q~~vp~~~~G~v~g~~~sl~~~  355 (412)
                      .+   -++.|+   . |. .+ ........+.-|+++||++.|+.....+.
T Consensus       130 ~lli~r~l~Gi---g-g~-~f-~~~~~~vs~wfp~~~rG~A~Gi~~g~G~~  174 (462)
T PRK15034        130 IFIVIALLCGF---A-GA-NF-ASSMGNISFFFPKAKQGSALGINGGLGNL  174 (462)
T ss_pred             HHHHHHHHHHH---H-HH-hH-HHHHHHHHHHCCHhHhHHHHHHHHHHHhh
Confidence            11   112233   1 22 33 34555567778999999999999644443

>PRK09584 tppB putative tripeptide transporter permease; Reviewed

Probab=97.23  E-value=0.021  Score=59.87  Aligned_cols=142  Identities=12%  Similarity=0.071  Sum_probs=78.7

Q ss_pred             chHHHHHHH-hcCCCCchhHHHhhHHHHHHHHHHHHHHHHHHH-hchhhHHHHHHHHHHHHHHHHHHHHhcCCCcCcchH
Q 015168          231 GSLMTAFLT-QRGLNPSIIGGFSGLCASMGVAATFLSAYLVRR-LGILKAGAAGLIFQASLLAMAVAVYWSGSLSQQNPL  308 (412)
Q Consensus       231 ~~~~~~y~~-~~gls~~~~G~~~~~~avggllGt~l~~~l~~R-~g~~r~~~~~~~~~~~~l~~~v~~~~~g~~~~~~~~  308 (412)
                      ....+.|+. ++|+|+...+...+...........+.+++.+| +|++++..++.....+....+  .+....    ...
T Consensus        41 ~~~l~~yl~~~lg~s~~~a~~~~~~~~~~~~~~~~~~G~LaDr~~G~r~~~~~g~~~~~ig~~l~--~~~~~~----~~~  114 (500)
T PRK09584         41 QGIMAVYLVKQLGMSEADSITLFSSFSALVYGLVAIGGWLGDKVLGTKRVIMLGAIVLAIGYALV--AWSGHD----AGI  114 (500)
T ss_pred             HHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHH--HHhccc----HHH
Confidence            345777885 589999988887776555545555789999999 599999888876544332222  221111    111


Q ss_pred             HHHHHHHHHhhhhhhhhhhhhhHHhhccCCcc--cchhHHHHHHHHHHHHHHHHHHHHHhccCCCchhHHHHHH
Q 015168          309 LFFLCLIVLSRLGHMSYDIVGAQILQTGIPSS--KANLIGTTEISVASLVESVMLGVAIIANDVSHFGFLATLS  380 (412)
Q Consensus       309 ~l~~~g~~~sr~GLw~~dl~~~~l~Q~~vp~~--~~G~v~g~~~sl~~~~~ll~~~~~~~~~~~~~f~~l~~~s  380 (412)
                      +.....+.....|+  +-.....+..+..|++  +++++.+..+...+....+.+.++....+.-.+.....+.
T Consensus       115 l~~~~~l~gig~g~--~~~~~~~l~~~~f~~~~~~~~~~~~~~~~~~~iG~~~gp~i~g~l~~~~g~~~~F~i~  186 (500)
T PRK09584        115 VYMGMATIAVGNGL--FKANPSSLLSTCYEKDDPRLDGAFTMYYMSINIGSFFSMLATPWLAAKYGWSVAFALS  186 (500)
T ss_pred             HHHHHHHHHHhhhc--ccCCHHHHHHHhcCCCchhhhhcchHHHHHHHHHHHHHHHHHHHHHHhhCHHHHHHHH
Confidence            11111111123343  3334445555555543  3455677767777766666655554444433344443333

>TIGR00898 2A0119 cation transport protein

Probab=97.22  E-value=0.0065  Score=63.15  Aligned_cols=121  Identities=17%  Similarity=0.106  Sum_probs=80.1

Q ss_pred             HhcCCC---CchhHHHhhHHHHHHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHHhcCCCcCcchHHHHHHHH
Q 015168          239 TQRGLN---PSIIGGFSGLCASMGVAATFLSAYLVRRLGILKAGAAGLIFQASLLAMAVAVYWSGSLSQQNPLLFFLCLI  315 (412)
Q Consensus       239 ~~~gls---~~~~G~~~~~~avggllGt~l~~~l~~R~g~~r~~~~~~~~~~~~l~~~v~~~~~g~~~~~~~~~l~~~g~  315 (412)
                      ++.+++   +...|+..+...++.++|+.+.+++.+|+|+++...++.....++....  .+.+ +    ..  .+...-
T Consensus       117 ~e~~l~c~~~~~~~~~~s~~~~g~~~g~~~~g~l~Dr~Grr~~~~~~~~~~~i~~~~~--~~~~-~----~~--~~~~~r  187 (505)
T TIGR00898       117 TEWDLVCEDAWKVDLTQSCFFVGVLLGSFVFGYLSDRFGRKKVLLLSTLVTAVSGVLT--AFSP-N----YT--VFLVFR  187 (505)
T ss_pred             EEecceechHHHHHHHHHHHHHHHHHHHHhHHHhhhhccchHHHHHHHHHHHHHHHHH--HHcc-c----HH--HHHHHH
Confidence            467888   8999999999999999999999999999999998887765443332221  2211 1    11  111122


Q ss_pred             HHhhhhhhhhhhhhhHHhhccCCcccchhHHHHHHHHHHHHHHHHHHHHHhcc
Q 015168          316 VLSRLGHMSYDIVGAQILQTGIPSSKANLIGTTEISVASLVESVMLGVAIIAN  368 (412)
Q Consensus       316 ~~sr~GLw~~dl~~~~l~Q~~vp~~~~G~v~g~~~sl~~~~~ll~~~~~~~~~  368 (412)
                      ++.+++.-..-.....+..|.+|+++||++.+..........++...+.....
T Consensus       188 ~l~G~~~~~~~~~~~~~~~e~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~  240 (505)
T TIGR00898       188 LLVGMGIGGIWVQAVVLNTEFLPKKQRAIVGTLIQVFFSLGLVLLPLVAYFIP  240 (505)
T ss_pred             HHHHhhccchHHHHHHHhheecChhhhHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence            22233443344566677889999999999999886555544444444444333

>TIGR00889 2A0110 nucleoside transporter

Probab=97.19  E-value=0.0085  Score=61.24  Aligned_cols=123  Identities=15%  Similarity=0.093  Sum_probs=74.7

Q ss_pred             HHHHHHhhhhhcchhccCCcHHHHHHHHHHHHHHHHHHHHHHHHHhccccccccchhHHHHHHHHHHHHHHHHHhhhhhh
Q 015168            6 KLILIVGGPLVGKLMDHSPRIPAYICLNTVQAAAQLLSAAMIIHAHTVIPTSSSMLLHPWFFVLVLAGAVERLTGVALGV   85 (412)
Q Consensus         6 ~lp~ll~g~~~G~~vDr~~R~~v~~~~~~~q~~~v~~s~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~l~~~a~~~   85 (412)
                      .+..++....+|.+.||.+||+++..+.+...+.    ..  ..... .+.+  +..+.+++..++.|....+.......
T Consensus       261 ~i~~i~~~~~~g~l~dr~g~r~~l~~~~~~~~v~----~~--l~~~~-~~~~--~~~~~l~l~~~l~g~~~~~~~~~~~~  331 (418)
T TIGR00889       261 QFSEIFFILTIPFFLKRFGIKKVMLLSLVAWALR----FG--FFAYG-DPEY--FGYALLFLSMIVYGCAFDFFNISGSV  331 (418)
T ss_pred             HHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHH----HH--HHHHc-Ccch--hhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            3455666788999999999999988886543221    11  11121 1100  01122333444555555444444333


Q ss_pred             hhcccceeeecCCCchhhhHHHHHHHH-HHHHHHHHHHHHHHHHHHhh------cChhHHHHHHHHH
Q 015168           86 AVERDWAVLLAGINRPIALAKANAVLN-RIDLLCEIAGASLFGILLSK------YEPVTCLKFAAGL  145 (412)
Q Consensus        86 ai~RDwv~~l~~~~~~~~L~~~Ns~l~-~id~v~~llgP~lgG~L~~~------~~~~~~~~~~~~~  145 (412)
                      .+ .|    .++++   +..+.++... ....++.++||.++|.+.+.      +||+.++.+.+..
T Consensus       332 ~i-~~----~~p~~---~~g~~~g~~~~~~~~lg~~iGp~l~G~l~~~~g~~~~~~~~~~f~~~~~~  390 (418)
T TIGR00889       332 FV-EK----EVPVH---IRASAQGLFTLMCNGFGSLLGYILSGVMVEKMFAYGTFDWQTMWLFFAGY  390 (418)
T ss_pred             HH-HH----HCCHH---HHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHhccccCCchHHHHHHHHHH
Confidence            22 23    45543   7888999997 56788999999999999987      4588776554333

This family of proteins transports nucleosides at a high affinity. The transport mechanism is driven by proton motive force. This family includes nucleoside permease NupG and xanthosine permease from E.Coli.

>KOG0569 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]

Probab=97.14  E-value=0.023  Score=59.13  Aligned_cols=127  Identities=13%  Similarity=0.002  Sum_probs=80.6

Q ss_pred             HHHhhHHHHHHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHHhcCCCcCcchHHHHHHHHHHhhhhhhhhhhh
Q 015168          249 GGFSGLCASMGVAATFLSAYLVRRLGILKAGAAGLIFQASLLAMAVAVYWSGSLSQQNPLLFFLCLIVLSRLGHMSYDIV  328 (412)
Q Consensus       249 G~~~~~~avggllGt~l~~~l~~R~g~~r~~~~~~~~~~~~l~~~v~~~~~g~~~~~~~~~l~~~g~~~sr~GLw~~dl~  328 (412)
                      +...+.-.+|++.|+++.+.+.+|+|++.+............+..........    ..++.  .|=...++..-..+..
T Consensus        63 S~~vs~f~iG~~~Gs~~~~~la~~~GRK~~l~~~~~l~~~~~~~~~~s~~~~~----~e~li--~GR~i~Gl~~gl~~~~  136 (485)
T KOG0569|consen   63 SLIVSIFFIGGMIGSFSSGLLADRFGRKNALLLSNLLAVLAALLMGLSKSAPS----FEMLI--LGRLIVGLACGLSTGL  136 (485)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHHHhhh----HHHHH--HHHHHHHHHhHHHHHH
Confidence            44457778899999999999999999998877776654443333333322211    11222  2322222222236678


Q ss_pred             hhHHhhccCCcccchhHHHHHHHHHHHHHHHHHHHH--HhccCCCchhHHHHHHH
Q 015168          329 GAQILQTGIPSSKANLIGTTEISVASLVESVMLGVA--IIANDVSHFGFLATLSL  381 (412)
Q Consensus       329 ~~~l~Q~~vp~~~~G~v~g~~~sl~~~~~ll~~~~~--~~~~~~~~f~~l~~~s~  381 (412)
                      +.-+.||.-|++.||.++.....--....++...++  -++-+++..+++.....
T Consensus       137 ~pmyl~E~sP~~~RG~~g~~~~~~~~~g~ll~~~~~l~~ilGt~~~W~~l~~~~~  191 (485)
T KOG0569|consen  137 VPMYLTEISPKNLRGALGTLLQIGVVIGILLGQVLGLPSLLGTEDLWPYLLAFPL  191 (485)
T ss_pred             HHHHHhhcChhhhccHHHHHHHHHHHHHHHHHHHHccHHhcCCCcchHHHHHHHH
Confidence            888999999999999998887776666666655544  33445555555555543

>PRK10207 dipeptide/tripeptide permease B; Provisional

Probab=97.11  E-value=0.026  Score=59.10  Aligned_cols=150  Identities=16%  Similarity=0.078  Sum_probs=87.1

Q ss_pred             HHHHHHH-hcCCCCchhHHHhhHHHHHHHHHHHHHHHHHHH-hchhhHHHHHHHHHHHHHHHHHHHHhcCCCcCcchHHH
Q 015168          233 LMTAFLT-QRGLNPSIIGGFSGLCASMGVAATFLSAYLVRR-LGILKAGAAGLIFQASLLAMAVAVYWSGSLSQQNPLLF  310 (412)
Q Consensus       233 ~~~~y~~-~~gls~~~~G~~~~~~avggllGt~l~~~l~~R-~g~~r~~~~~~~~~~~~l~~~v~~~~~g~~~~~~~~~l  310 (412)
                      ....|++ ++|++++..++..+...........+.+++.+| +|++|+..++.....+....+.  +....    ...+.
T Consensus        36 ~l~~yl~~~lg~~~~~a~~i~~~~~~~~~~~~~~~G~laDr~~G~r~~~~~g~~~~~~g~~~~~--~~~~~----~~ll~  109 (489)
T PRK10207         36 ILAVFFVKQLGFSQEQAFITFGAFAALVYGLISIGGYVGDHLLGTKRTIVLGAIVLAIGYFMTG--MSLLK----PDLIF  109 (489)
T ss_pred             HHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHhhHHHhhhhccchHHHHHHHHHHHHHHHHHHH--Hhccc----hhHHH
Confidence            4677876 589999999888888777777777899999999 9999999988775544333332  11111    11111


Q ss_pred             HHHHHHHh--hhhhhhhhhhhhHHhhccCCcc--cchhHHHHHHHHHHHHHHHHHHHHHhccCCCchhHHHHHHHHHHHH
Q 015168          311 FLCLIVLS--RLGHMSYDIVGAQILQTGIPSS--KANLIGTTEISVASLVESVMLGVAIIANDVSHFGFLATLSLLSVVG  386 (412)
Q Consensus       311 ~~~g~~~s--r~GLw~~dl~~~~l~Q~~vp~~--~~G~v~g~~~sl~~~~~ll~~~~~~~~~~~~~f~~l~~~s~~~v~~  386 (412)
                        .+.++.  +.|+ ..++. ..+.-+..|++  +|++..+......+....+.+.++....+.-.+.+...+...++..
T Consensus       110 --~~~~l~~ig~g~-~~~~~-~~li~~~~p~~~~~~~~~~~~~~~~~nig~~~g~~l~g~l~~~~gw~~~F~i~~i~~~~  185 (489)
T PRK10207        110 --IALGTIAVGNGL-FKANP-ASLLSKCYPPKDPRLDGAFTLFYMSINIGSLISLSLAPVIADKFGYSVTYNLCGAGLII  185 (489)
T ss_pred             --HHHHHHHhcccc-ccCCH-HHHHHHhcCCCchhhhcchhHHHHHHHHHHHHHHHHHHHHHHhhChHHHHHHHHHHHHH
Confidence              122222  3344 23333 44555555555  5577777777666665555555544443322344444444334444


Q ss_pred             HHHHHH
Q 015168          387 AAWMFC  392 (412)
Q Consensus       387 ~~~~~~  392 (412)
                      +.+.|.
T Consensus       186 ~~~~~~  191 (489)
T PRK10207        186 ALLVYF  191 (489)
T ss_pred             HHHHHH
Confidence            444444

>COG3104 PTR2 Dipeptide/tripeptide permease [Amino acid transport and metabolism]

Probab=97.11  E-value=0.22  Score=51.57  Aligned_cols=355  Identities=15%  Similarity=0.112  Sum_probs=165.5

Q ss_pred             hhhhcchhccC-CcHHHHHHHHHHHHHHHHHHHHHHHHHhccccccccchhHHHHHHHHHHHHHHHHHhhhhhhhhcccc
Q 015168           13 GPLVGKLMDHS-PRIPAYICLNTVQAAAQLLSAAMIIHAHTVIPTSSSMLLHPWFFVLVLAGAVERLTGVALGVAVERDW   91 (412)
Q Consensus        13 g~~~G~~vDr~-~R~~v~~~~~~~q~~~v~~s~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~l~~~a~~~ai~RDw   91 (412)
                      ....|.+.||. ++||++...-+    .+++--.  +.....  ..+   ...+++...++.+..-++.. +..++.=| 
T Consensus        78 ~i~GG~laDr~LG~~~tI~lGai----l~~iGh~--~L~~~~--~~~---~~gl~i~L~~I~iG~Gl~K~-NiS~llg~-  144 (498)
T COG3104          78 PIIGGWLADRVLGTRRTIVLGAI----LMAIGHL--VLAISS--VSG---PGGLYIGLALIIVGTGLFKP-NISSLLGE-  144 (498)
T ss_pred             HHHHHHHHHHhcchhHHHHHHHH----HHHHHHH--HHhccc--ccc---ccHHHHHHHHHHhccccccc-cHHHHHHH-
Confidence            55677888999 67666544422    1121111  111111  000   11345545555555555543 33333334 


Q ss_pred             eeeecCCCchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhcChhHHHHHHHHHHHHHHHHHHHHHHHhhhccccccccc
Q 015168           92 AVLLAGINRPIALAKANAVLNRIDLLCEIAGASLFGILLSKYEPVTCLKFAAGLIMWSLPVMIILTWFTNKISSGVLDRA  171 (412)
Q Consensus        92 v~~l~~~~~~~~L~~~Ns~l~~id~v~~llgP~lgG~L~~~~~~~~~~~~~~~~~~~s~~~~~~~l~~~~~~~~~~l~~~  171 (412)
                         +++++++ ++++.++..=..+-+..+++|.+.|++....||+.+|...+.--..++...+    ..+|-......++
T Consensus       145 ---ly~~~Dp-rrD~gFt~fY~~iNiGsl~~p~i~~~~~~~~g~~~gF~~aavGm~~gl~~f~----~~~r~~~~~~~~~  216 (498)
T COG3104         145 ---LYPKDDP-RRDGGFTLFYMGINIGSLIAPIITGLLAINYGWHVGFGLAAVGMIIGLVIFL----LGRRHVKGIGGVP  216 (498)
T ss_pred             ---hcCCCCc-ccCCCccEEEEEeehHHHHHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHH----HccchhcCCCCCC
Confidence               6776666 6888888888888899999999999999999999987643332233332221    1111110010000


Q ss_pred             cccccccCCCCCCCCCCchhhh-----H--------HhHH--------HHHHh-HHHHhcCC--------cchH--HHHH
Q 015168          172 KCSQSCCRTSNEGPVPDADNIV-----D--------VGIE--------AIKLG-WKEYMQQP--------VLPA--SLAY  219 (412)
Q Consensus       172 ~~~~~~~~~~~~~~~~~~~~~~-----~--------~~~~--------~~~~g-~~~~~~~~--------v~~~--~~~~  219 (412)
                      +..  .. ..++ ..+.-.+..     .        ..++        .+..+ .+.-++++        .+..  .+..
T Consensus       217 ~~~--~~-~~~~-~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~er~r~~~~~~Lfl~  292 (498)
T COG3104         217 DPN--PL-SFNF-LLPVLGGLVVMILAALLTLLLNQNTFSGVLLVISILIAIIYFAEAFRSPKVFDERRRLLAAIPLFLF  292 (498)
T ss_pred             Ccc--ch-hhhh-hhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCccHHHHHHHHHHHHHHHH
Confidence            000  00 0000 000000000     0        0000        00000 01112221        1222  4455


Q ss_pred             HHHHHHhhhccchHHHHHHHh---cC-C-CCchhHHHhhHHHHHHHHHHHHHHHHHHHhchhh-------HHHHHHHHHH
Q 015168          220 VLLCLNVVLTPGSLMTAFLTQ---RG-L-NPSIIGGFSGLCASMGVAATFLSAYLVRRLGILK-------AGAAGLIFQA  287 (412)
Q Consensus       220 a~l~~t~v~~~~~~~~~y~~~---~g-l-s~~~~G~~~~~~avggllGt~l~~~l~~R~g~~r-------~~~~~~~~~~  287 (412)
                      +.+|.+.-....+....|..+   ++ + -+---+++.+.+.+.-++.+-+..++..+++.++       ..-.+.....
T Consensus       293 ~~iFW~~~~Q~~ssl~~~a~~~v~~~~~g~~vp~~~fQslNp~~Iii~~pI~a~l~~~l~~~~~~ps~~~KFalGl~l~g  372 (498)
T COG3104         293 AVIFWALYEQMGSSLNLYADRNVNRQIFGFEVPPAWFQSLNPFFIILFSPILAALWTKLGRGNKQPSTPIKFALGLILAG  372 (498)
T ss_pred             HHHHHHHHHhccchHHHHHHHhhcccccceecCHHHHHhhCHHHHHHHHHHHHHHHhHhhcCCCCCCcchHHHHHHHHHH
Confidence            666633223345567778753   33 1 1122357789999999999888888877755541       1112222111


Q ss_pred             -HHHHHHHHHHhcCCCcCcchHHHHHHHHHHhhhhhhhhhhhhhHHhhccCCcccchhHHHHHHHHHHHHHHHHHHHHH-
Q 015168          288 -SLLAMAVAVYWSGSLSQQNPLLFFLCLIVLSRLGHMSYDIVGAQILQTGIPSSKANLIGTTEISVASLVESVMLGVAI-  365 (412)
Q Consensus       288 -~~l~~~v~~~~~g~~~~~~~~~l~~~g~~~sr~GLw~~dl~~~~l~Q~~vp~~~~G~v~g~~~sl~~~~~ll~~~~~~-  365 (412)
                       ..+++.....+.+.++...++.+.+.+.++..+|=-..|.+-.+..-+..|++..+.+.|..-.-+..-..+...+.. 
T Consensus       373 ~~fl~l~~~~~~~~~~~~~~s~~~lil~y~l~s~gEL~iSpvGLs~~t~laP~~~~s~~ma~wfLt~a~~~~l~g~va~~  452 (498)
T COG3104         373 LGFLILLLAGIWFGGPSGLVSVWWLVLSYVLQSFGELFISPVGLSMVTKLAPPALKSFIMAMWFLTVAAGQTLGGQVAGL  452 (498)
T ss_pred             HHHHHHHHHHHhhcCCCCCcCHHHHHHHHHHHHHHHHHhCHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHhhceeccc
Confidence             111221122333322223343333334333344422344444455666679988888877765555443333332222 


Q ss_pred             ------hccCCCchhHHHHHHHHHHHHHHHHHH
Q 015168          366 ------IANDVSHFGFLATLSLLSVVGAAWMFC  392 (412)
Q Consensus       366 ------~~~~~~~f~~l~~~s~~~v~~~~~~~~  392 (412)
                            ......+-..-+.+....+..+.+++.
T Consensus       453 ~~~~~~~~~~~~~~~~F~~~g~v~i~~~~~~~~  485 (498)
T COG3104         453 TAVTDPAYTAFIEGRVFGTIGVVAIVIGILLLL  485 (498)
T ss_pred             ccccchhhhhhhhhhhHHHHHHHHHHHHHHHHH
Confidence                  122222333334444445666666665

>TIGR00882 2A0105 oligosaccharide:H+ symporter

Probab=97.06  E-value=0.023  Score=57.19  Aligned_cols=57  Identities=14%  Similarity=0.048  Sum_probs=48.7

Q ss_pred             ccchHHHHHHHh-cCCCCchhHHHhhHHHHHHHHHHHHHHHHHHHhchhhHHHHHHHH
Q 015168          229 TPGSLMTAFLTQ-RGLNPSIIGGFSGLCASMGVAATFLSAYLVRRLGILKAGAAGLIF  285 (412)
Q Consensus       229 ~~~~~~~~y~~~-~gls~~~~G~~~~~~avggllGt~l~~~l~~R~g~~r~~~~~~~~  285 (412)
                      .+...++.|+++ +|+|+.+.|+..+...++...+....+++.+|+|++|....+...
T Consensus        20 ~~~~~~~~~~~~~~g~s~~~~g~~~~~~~l~~~i~~~~~G~l~Dr~grr~~~~~~~~~   77 (396)
T TIGR00882        20 AYFPFFPIWLHDVNGLSKTDTGIVFSCISLFSILFQPLFGLISDKLGLKKHLLWIISG   77 (396)
T ss_pred             HHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHH
Confidence            344456778764 799999999999999999999999999999999999988766543

>PRK11128 putative 3-phenylpropionic acid transporter; Provisional

Probab=97.06  E-value=0.02  Score=57.39  Aligned_cols=66  Identities=21%  Similarity=0.194  Sum_probs=49.3

Q ss_pred             CCcchHHHHHHHHHHHhhhccchHHHHHHHhcCCCCchhHHHhhHHHHHHHHHHHHHHHHHHHhchh
Q 015168          210 QPVLPASLAYVLLCLNVVLTPGSLMTAFLTQRGLNPSIIGGFSGLCASMGVAATFLSAYLVRRLGIL  276 (412)
Q Consensus       210 ~~v~~~~~~~a~l~~t~v~~~~~~~~~y~~~~gls~~~~G~~~~~~avggllGt~l~~~l~~R~g~~  276 (412)
                      ||.......+-..+++ ...+....+.|++++|.|+.++|+..++..++.+++..+.+++.+|+|++
T Consensus         4 ~~~~~~~~~~~~~~~~-~g~~~p~l~~~l~~~g~s~~~iG~~~~~~~l~~~l~~~~~g~l~dr~g~~   69 (382)
T PRK11128          4 QPTRWLALSYFGYFFA-YGVFLPFWSVWLKGQGYTPETIGLLLGAGLVARFLGSLLIAPRVKDPSQL   69 (382)
T ss_pred             cccHHHHHHHHHHHHH-HHHHhhhHHHHHHhcCCCHHHHHHHHHHHHHHHHhhhHHHHHHHhhhcch
Confidence            4444444333333332 12334456789999999999999999999999999999999999999984

>TIGR00892 2A0113 monocarboxylate transporter 1

Probab=96.97  E-value=0.02  Score=59.11  Aligned_cols=119  Identities=15%  Similarity=0.121  Sum_probs=73.6

Q ss_pred             HHHHHHhcCCCCchhHHHhhHHHHHHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHHhcCCCcCcchHHH---
Q 015168          234 MTAFLTQRGLNPSIIGGFSGLCASMGVAATFLSAYLVRRLGILKAGAAGLIFQASLLAMAVAVYWSGSLSQQNPLLF---  310 (412)
Q Consensus       234 ~~~y~~~~gls~~~~G~~~~~~avggllGt~l~~~l~~R~g~~r~~~~~~~~~~~~l~~~v~~~~~g~~~~~~~~~l---  310 (412)
                      ...+..+.|.+++.+|+..+...++..++..+.+++.+|+|+++....+..........+  .+.. .   ....++   
T Consensus        42 ~~~i~~~~g~s~~~~~~~~s~~~~~~~~~~~~~G~l~dr~g~r~~l~~~~~~~~~~~~~~--~~~~-~---~~~l~~~~~  115 (455)
T TIGR00892        42 FKELQQIFQATYSETAWISSIMLAVLYAGGPISSILVNRFGCRPVVIAGGLLASLGMILA--SFSS-N---VIELYLTAG  115 (455)
T ss_pred             HHHHHHHhCcchhHHHHHHHHHHHHHHHhhHHHHHHHHHcCchHHHHhhHHHHHHHHHHH--HHhh-h---HHHHHHHHH
Confidence            444556799999999999999999889999999999999999998876654322211111  2211 1   111111   


Q ss_pred             HHHHHHHhhhhhhhhhhhhhHHhhccCCcccchhHHHHHHHHHHHHHHHHHHHH
Q 015168          311 FLCLIVLSRLGHMSYDIVGAQILQTGIPSSKANLIGTTEISVASLVESVMLGVA  364 (412)
Q Consensus       311 ~~~g~~~sr~GLw~~dl~~~~l~Q~~vp~~~~G~v~g~~~sl~~~~~ll~~~~~  364 (412)
                      ++.|+   ..|. .+..+ ..+.-+.. +++||++.|..++.++....+...++
T Consensus       116 ~l~G~---~~~~-~~~~~-~~~~~~~~-~~~r~~a~g~~~~~~~~g~~~~~~l~  163 (455)
T TIGR00892       116 FITGL---GLAF-NFQPS-LTMLGKYF-YRRRPLANGLAMAGSPVFLSTLAPLN  163 (455)
T ss_pred             HHHHh---cchh-hhhHH-HHHHHHHH-HhhHHHHHHHHHhcccHHHHHHHHHH
Confidence            11122   2222 12233 23334444 57899999999988887555444443

>PRK11010 ampG muropeptide transporter; Validated

Probab=96.92  E-value=0.073  Score=55.64  Aligned_cols=130  Identities=18%  Similarity=0.148  Sum_probs=77.6

Q ss_pred             hHHHHHHHhcCCCCchhHHHhhHHHHHHHHHHHHHHHHHHHh-----chhhH-HHHHHHHHHHHHHHHHHHHhcCCCcCc
Q 015168          232 SLMTAFLTQRGLNPSIIGGFSGLCASMGVAATFLSAYLVRRL-----GILKA-GAAGLIFQASLLAMAVAVYWSGSLSQQ  305 (412)
Q Consensus       232 ~~~~~y~~~~gls~~~~G~~~~~~avggllGt~l~~~l~~R~-----g~~r~-~~~~~~~~~~~l~~~v~~~~~g~~~~~  305 (412)
                      ...+.|.++.|.|.+++|.+ +..+... .+.++.+++..|+     |++|. +.++...-..+  .....+..+. . .
T Consensus        33 ~~l~~~l~~~g~~~~~ig~~-~~~~~~~-~~~~l~gpl~Dr~~~~~~Grrr~~ll~~~i~~~~~--~~~~a~~~~~-~-~  106 (491)
T PRK11010         33 GTLQAWMTVENIDLKTIGFF-SLVGQAY-VFKFLWSPLMDRYTPPFLGRRRGWLLATQLLLLVA--IAAMGFLEPG-T-Q  106 (491)
T ss_pred             HHHHHHHHhCCCCHHHHHHH-HHHHHHH-HHHHHHHHHHHcccccCCCCchHHHHHHHHHHHHH--HHHHHHcCCc-c-h
Confidence            35677888899999999997 2233332 5789999999999     88775 33333221111  1111222211 1 1


Q ss_pred             chHHHHHHHHHHhhhhhhhhhhhhhHHhhccCCcccchhHHHHHHHHHHHHHHHHHHHHHhccC
Q 015168          306 NPLLFFLCLIVLSRLGHMSYDIVGAQILQTGIPSSKANLIGTTEISVASLVESVMLGVAIIAND  369 (412)
Q Consensus       306 ~~~~l~~~g~~~sr~GLw~~dl~~~~l~Q~~vp~~~~G~v~g~~~sl~~~~~ll~~~~~~~~~~  369 (412)
                      ... +....+ +..++--..|.....+..|..|+++||+.++....-.....++...+.....+
T Consensus       107 l~~-l~~~~~-l~~~~~a~~~i~~~a~~~~~~~~~~rg~~~~i~~~g~~lG~llg~~l~~~l~~  168 (491)
T PRK11010        107 LRW-LAALAV-VIAFCSASQDIVFDAWKTDVLPAEERGAGAAISVLGYRLAMLVSGGLALWLAD  168 (491)
T ss_pred             HHH-HHHHHH-HHHHHHHHHHHHHHHHHHHhcChhhhHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence            111 111111 11222335888888999999999999999999988877755555554444433

>PTZ00207 hypothetical protein; Provisional

Probab=96.90  E-value=0.047  Score=58.37  Aligned_cols=116  Identities=9%  Similarity=0.068  Sum_probs=71.1

Q ss_pred             HHhcCCCCchhHHHhhHHHHHHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHHhcCCCcCcchHHHHHHHHHH
Q 015168          238 LTQRGLNPSIIGGFSGLCASMGVAATFLSAYLVRRLGILKAGAAGLIFQASLLAMAVAVYWSGSLSQQNPLLFFLCLIVL  317 (412)
Q Consensus       238 ~~~~gls~~~~G~~~~~~avggllGt~l~~~l~~R~g~~r~~~~~~~~~~~~l~~~v~~~~~g~~~~~~~~~l~~~g~~~  317 (412)
                      .+++|+|..+++.+.+.+...+ .+.+..+++..|+|++++..++.....+....+... ..+..  ..+...+....++
T Consensus        54 ~~~lgls~~~l~~i~svg~~~g-~~~lp~G~L~Dr~G~R~vllig~ll~~iG~ll~ala-~~~~i--~~s~~~l~l~r~l  129 (591)
T PTZ00207         54 QARYNLTQRDLSTITTVGIAVG-YFLLPYSFIYDYLGPRPIFVLSMTVFCLGTLLFALT-FQEVI--EGSVVRLSVYNGL  129 (591)
T ss_pred             HHHhCcCHHHHHHHHHHHHHHH-HHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHH-hcccc--cCcHHHHHHHHHH
Confidence            3468999999999988765555 355678999999999999888866433322222111 11110  0112222112223


Q ss_pred             hhhhhhhhhhhhhHHhhccCCcccchhHHHHHHHHHHHHHH
Q 015168          318 SRLGHMSYDIVGAQILQTGIPSSKANLIGTTEISVASLVES  358 (412)
Q Consensus       318 sr~GLw~~dl~~~~l~Q~~vp~~~~G~v~g~~~sl~~~~~l  358 (412)
                      .++|--.++........++. |++||++.|+..+...+-..
T Consensus       130 ~G~G~~~~~~~~~~~i~~~F-p~~RG~a~Gi~~~~~gLGsa  169 (591)
T PTZ00207        130 MTLGCMLFDLGAVVTVLSVF-PSNRGAVVAIMKTFTGLGSA  169 (591)
T ss_pred             HHHHHHHHHHHHHHHHHHhC-hhhhHHHHHHHHHHHHHHHH
Confidence            33444335555556666665 57899999999998887554

>PRK10406 alpha-ketoglutarate transporter; Provisional

Probab=96.79  E-value=0.091  Score=53.65  Aligned_cols=119  Identities=9%  Similarity=-0.044  Sum_probs=69.2

Q ss_pred             CCCCch---hHHHhhHHHHHHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHHhcCCCcC-cchHHHHHHHHHH
Q 015168          242 GLNPSI---IGGFSGLCASMGVAATFLSAYLVRRLGILKAGAAGLIFQASLLAMAVAVYWSGSLSQ-QNPLLFFLCLIVL  317 (412)
Q Consensus       242 gls~~~---~G~~~~~~avggllGt~l~~~l~~R~g~~r~~~~~~~~~~~~l~~~v~~~~~g~~~~-~~~~~l~~~g~~~  317 (412)
                      +.++..   .+..++.+.++..+|+++.+++.+|+|++|+..++..........+  .+.++-... ......+...=++
T Consensus        56 ~~~~~~~~~~~~~~~~~~~~~~ig~~~~G~l~Dr~Grr~~l~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~l~~~R~l  133 (432)
T PRK10406         56 GNTTTQLLQTAGVFAAGFLMRPIGGWLFGRIADKHGRKKSMLISVCMMCFGSLVI--ACLPGYETIGTWAPALLLLARLF  133 (432)
T ss_pred             CCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHH--hhcCCchhHHHHHHHHHHHHHHH
Confidence            455553   4455666677777999999999999999999888776433222221  222211000 0011112122222


Q ss_pred             hhhhhhhhhhhhhHHhhccCCcccchhHHHHHHHHHHHHHHHHHH
Q 015168          318 SRLGHMSYDIVGAQILQTGIPSSKANLIGTTEISVASLVESVMLG  362 (412)
Q Consensus       318 sr~GLw~~dl~~~~l~Q~~vp~~~~G~v~g~~~sl~~~~~ll~~~  362 (412)
                      .++|.-..-.....+..|..|+++||+..+.....+..-.++...
T Consensus       134 ~G~g~g~~~~~~~~~i~e~~p~~~rg~~~~~~~~~~~~G~~~~~~  178 (432)
T PRK10406        134 QGLSVGGEYGTSATYMSEVAVEGRKGFYASFQYVTLIGGQLLALL  178 (432)
T ss_pred             HHhhhhhhHhhHHHHHHHhCCCCcccHHHHHHHHHHHHHHHHHHH
Confidence            233332234456678888999999999998877666554444433

>TIGR00792 gph sugar (Glycoside-Pentoside-Hexuronide) transporter

Probab=96.79  E-value=0.019  Score=58.17  Aligned_cols=121  Identities=14%  Similarity=0.117  Sum_probs=71.2

Q ss_pred             HHHhcCCCCchhHHHhhHHHHHHHHHHHHHHHHHHH----hchhhH-HHHHHHHHHHHHHHHHHHHhcCCCcCcchHHHH
Q 015168          237 FLTQRGLNPSIIGGFSGLCASMGVAATFLSAYLVRR----LGILKA-GAAGLIFQASLLAMAVAVYWSGSLSQQNPLLFF  311 (412)
Q Consensus       237 y~~~~gls~~~~G~~~~~~avggllGt~l~~~l~~R----~g~~r~-~~~~~~~~~~~l~~~v~~~~~g~~~~~~~~~l~  311 (412)
                      |.++.|+|+...|++.....+...+...+.+++..|    +|++|- +.++...   ..+.....++.++.+.......+
T Consensus        26 ~~~~~g~s~~~~g~i~~~~~i~~~i~~p~~G~lsDr~~~r~Grrr~~i~~~~~~---~~i~~~~~~~~~~~~~~~~~~~~  102 (437)
T TIGR00792        26 YTDVLGLSAAFVGTLFLVARILDAITDPIMGNIVDRTRTRWGKFRPWLLIGAIP---FSIVLVLLFTTPDFSATGKLVYA  102 (437)
T ss_pred             HHHccCCCHHHHHHHHHHHHHHHHhccchheEeeecCCCCCCCcchhHHHhHHH---HHHHHHHHHhCCCCCcchHHHHH
Confidence            344689999999999999999999999999999887    555443 4444332   11122222222221111111122


Q ss_pred             HHHHHHhhhhhhhhhhhhhHHhhccC-CcccchhHHHHHHHHHHHHHHHH
Q 015168          312 LCLIVLSRLGHMSYDIVGAQILQTGI-PSSKANLIGTTEISVASLVESVM  360 (412)
Q Consensus       312 ~~g~~~sr~GLw~~dl~~~~l~Q~~v-p~~~~G~v~g~~~sl~~~~~ll~  360 (412)
                      .........+.-.++.....+.-+.+ ++++|++.++..+...+...++.
T Consensus       103 ~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~R~~~~~~~~~~~~~g~~l~  152 (437)
T TIGR00792       103 YITYILLGLFYSFVNIPYWSLVPAITLDPRERESLSTFRRFGATLGGLLV  152 (437)
T ss_pred             HHHHHHHHHHHHhhcccHhhCcccccCCHHHHHHHHHHHHHHHHHHHHHH
Confidence            11112223333335566666666655 57899999999887776644443

GPH:cation symporters catalyze uptake of sugars in symport with a monovalent cation (H+ or Na+). Members of this family includes transporters for melibiose, lactose, raffinose, glucuronides, pentosides and isoprimeverose. Mutants of two groups of these symporters (the melibiose permeases of enteric bacteria, and the lactose permease of Streptococcus thermophilus) have been isolated in which altered cation specificity is observed or in which sugar transport is uncoupled from cation symport (i.e., uniport is catalyzed). The various members of the family can use Na+, H+ or Li, Na+ or Li+, H+ or Li+, or only H+ as the symported cation. All of these proteins possess twelve putative transmembrane a-helical spanners.

>COG2814 AraJ Arabinose efflux permease [Carbohydrate transport and metabolism]

Probab=96.64  E-value=0.15  Score=51.66  Aligned_cols=116  Identities=16%  Similarity=0.067  Sum_probs=75.4

Q ss_pred             chHHHHHHHhcCCCCchhHHHhhHHHHHHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHHhcCCCcCcchHHH
Q 015168          231 GSLMTAFLTQRGLNPSIIGGFSGLCASMGVAATFLSAYLVRRLGILKAGAAGLIFQASLLAMAVAVYWSGSLSQQNPLLF  310 (412)
Q Consensus       231 ~~~~~~y~~~~gls~~~~G~~~~~~avggllGt~l~~~l~~R~g~~r~~~~~~~~~~~~l~~~v~~~~~g~~~~~~~~~l  310 (412)
                      .++.+--.+++|+|+...|...+.-+.+..+|+.+-..+.+|+.++|.+++....-...-+++  .+.+ +    ...  
T Consensus        33 ~gLLp~iA~dl~vs~~~aG~lis~yAl~~ai~ap~l~~lt~r~~Rr~lLl~~l~lFi~~n~l~--alAp-~----f~~--  103 (394)
T COG2814          33 VGLLPPIAADLGVSEGAAGQLITAYALGVALGAPLLALLTGRLERRRLLLGLLALFIVSNLLS--ALAP-S----FAV--  103 (394)
T ss_pred             HhchHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHcccchHHHHHHHHHHHHHHHHHH--HHhc-c----HHH--
Confidence            345666678899999999999999999999999999999999999888775544211111111  2221 1    111  


Q ss_pred             HHHHHHHhhhhhhhhhhhhhHHhhccCCcccchhHHHHHHHHHHH
Q 015168          311 FLCLIVLSRLGHMSYDIVGAQILQTGIPSSKANLIGTTEISVASL  355 (412)
Q Consensus       311 ~~~g~~~sr~GLw~~dl~~~~l~Q~~vp~~~~G~v~g~~~sl~~~  355 (412)
                      ++.+=+++.+..-.|=-....+--+.+||++|||+-|+..+=...
T Consensus       104 Ll~aR~~~g~a~G~f~~i~~~~a~~lvpp~~~~~Aiaiv~~G~tl  148 (394)
T COG2814         104 LLLARALAGLAHGVFWSIAAALAARLVPPGKRGRALALVFTGLTL  148 (394)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHcCccchhhHHHHHHHHHHH
Confidence            111211111111113344555666788999999999888766655

>TIGR01301 GPH_sucrose GPH family sucrose/H+ symporter

Probab=96.64  E-value=0.041  Score=57.43  Aligned_cols=126  Identities=12%  Similarity=0.101  Sum_probs=81.4

Q ss_pred             HHHHHHHhcCCCCchhHHHhhHHHHHHHHHHHHHHHHHH----HhchhhHHHHHHHHHHHHHHHHHHHHhcCCC------
Q 015168          233 LMTAFLTQRGLNPSIIGGFSGLCASMGVAATFLSAYLVR----RLGILKAGAAGLIFQASLLAMAVAVYWSGSL------  302 (412)
Q Consensus       233 ~~~~y~~~~gls~~~~G~~~~~~avggllGt~l~~~l~~----R~g~~r~~~~~~~~~~~~l~~~v~~~~~g~~------  302 (412)
                      ..+.|++++|+++...+.+..++.+.+++...+.+.+..    |+|++|..+++...-... ......+.....      
T Consensus        26 ~l~~yl~~lg~~~~~~~~i~~~~~l~~~i~~Pi~G~lSDr~~sr~GRRrp~il~g~~~~~~-~l~ll~~~~~~~~~~~~~  104 (477)
T TIGR01301        26 LLTPYVQELGIPHAWASIIWLCGPLSGLLVQPLVGYLSDRCTSRFGRRRPFIAAGAALVAF-AVILIGFAADIGHLFGDN  104 (477)
T ss_pred             HHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHhHeeehhcCCCCCCCChHHHHHHHHHHHHH-HHHHHHhCchhhhhcccc
Confidence            355688889999999999999999999999999999998    599999876543321111 111111111000      


Q ss_pred             ----cCcchHHHHHHHHHHhhhhhhhhhhh-------hhHHhhccCCcccc--hhHHHHHHHHHHHHHHHHHHHHHh
Q 015168          303 ----SQQNPLLFFLCLIVLSRLGHMSYDIV-------GAQILQTGIPSSKA--NLIGTTEISVASLVESVMLGVAII  366 (412)
Q Consensus       303 ----~~~~~~~l~~~g~~~sr~GLw~~dl~-------~~~l~Q~~vp~~~~--G~v~g~~~sl~~~~~ll~~~~~~~  366 (412)
                          ........++.       |+|..|.+       ...+.-+.+|+++|  +++++.++.+...-..+.+.++..
T Consensus       105 ~~~~~~~~~i~~~~i-------~~~lld~~~n~~~~p~rALiaDl~p~~~~~~~~a~~~~~~~~~lG~ilg~~~g~~  174 (477)
T TIGR01301       105 LDKKTKPRAIIVFVV-------GFWILDVANNMLQGPCRAFLADLTGGDARRTRIANAYFSFFMAIGNVLGYAAGAY  174 (477)
T ss_pred             ccccchhHHHHHHHH-------HHHHHHHHHHHHHHHHHHhcccccCchhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence                00011122333       44444443       34556777887754  789999998888877777777654

This model represents sucrose/proton symporters, found in plants, from the Glycoside-Pentoside-Hexuronide (GPH)/cation symporter family. These proteins are predicted to have 12 transmembrane domains. Members may export sucrose (e.g. SUT1, SUT4) from green parts to the phloem for long-distance transport or import sucrose (e.g SUT2) to sucrose sinks such as the tap root of the carrot.

>KOG0254 consensus Predicted transporter (major facilitator superfamily) [General function prediction only]

Probab=96.57  E-value=0.062  Score=56.41  Aligned_cols=140  Identities=11%  Similarity=-0.009  Sum_probs=95.7

Q ss_pred             chhHHHhhHHHHHHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHHhcCCCcCcchHHHHHHHHHHhhhhhhhh
Q 015168          246 SIIGGFSGLCASMGVAATFLSAYLVRRLGILKAGAAGLIFQASLLAMAVAVYWSGSLSQQNPLLFFLCLIVLSRLGHMSY  325 (412)
Q Consensus       246 ~~~G~~~~~~avggllGt~l~~~l~~R~g~~r~~~~~~~~~~~~l~~~v~~~~~g~~~~~~~~~l~~~g~~~sr~GLw~~  325 (412)
                      +..+++-+...++..+|++..+++.+++|+++++..+.....+..+++  .+..       ....+..|=++.++|.-..
T Consensus        89 ~~~s~~~s~~~lga~~g~l~~g~l~d~~GRk~~l~~~~~~~~iG~ii~--~~a~-------~~~~l~~GR~l~G~g~G~~  159 (513)
T KOG0254|consen   89 VRQGLLTSILNLGALVGSLLAGRLGDRIGRKKTLLLAVVLFLIGAIII--ALAP-------SWYQLIVGRILTGLGVGGA  159 (513)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHH--HHhh-------hHHHHHHHHHHhccchhhh
Confidence            355899999999999999999999999999999988776544333332  2111       1233334555556666557


Q ss_pred             hhhhhHHhhccCCcccchhHHHHHHHHHHHHHHHHHHHHHhccCC--CchhHHHHHHHHHHHHHHHHHHHH
Q 015168          326 DIVGAQILQTGIPSSKANLIGTTEISVASLVESVMLGVAIIANDV--SHFGFLATLSLLSVVGAAWMFCHW  394 (412)
Q Consensus       326 dl~~~~l~Q~~vp~~~~G~v~g~~~sl~~~~~ll~~~~~~~~~~~--~~f~~l~~~s~~~v~~~~~~~~~~  394 (412)
                      .....-+.-|..|++.||...+...-....--++.+......++.  +-+-++.+..+.++.....++..|
T Consensus       160 ~~~~piy~sEiap~~~RG~l~~~~~l~~~~Gi~~~~~~~~~~~~~~~~Wr~~~~~~~i~~~~~~~~~~~~p  230 (513)
T KOG0254|consen  160 SVLAPVYISEIAPAHIRGTLVSLYQLFITIGILLGYCINYGTSKVYAGWRIPLGLALIPAVILALGMLFLP  230 (513)
T ss_pred             hhcchhhHhhcCChhhhHHHHHHHHHHHHHHHHHHHHHhhhhccCCccHHHHHHHHHHHHHHHHHHHHhCC
Confidence            777888888888999999999988777776556666666666654  333344444555555555555544

>PF00083 Sugar_tr: Sugar (and other) transporter; InterPro: IPR005828 Recent genome-sequencing data and a wealth of biochemical and molecular genetic investigations have revealed the occurrence of dozens of families of primary and secondary transporters

Probab=96.56  E-value=1.1e-06  Score=89.86  Aligned_cols=121  Identities=13%  Similarity=0.066  Sum_probs=66.0

Q ss_pred             HhcCCCCc-hhHHHhhHHHHHHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHH--HHHhcCCCcCcchHHHHHHHH
Q 015168          239 TQRGLNPS-IIGGFSGLCASMGVAATFLSAYLVRRLGILKAGAAGLIFQASLLAMAV--AVYWSGSLSQQNPLLFFLCLI  315 (412)
Q Consensus       239 ~~~gls~~-~~G~~~~~~avggllGt~l~~~l~~R~g~~r~~~~~~~~~~~~l~~~v--~~~~~g~~~~~~~~~l~~~g~  315 (412)
                      ++.|.++. ...   ...++..+++++....+.+|+|+++....+.....++.....  ........+......+....+
T Consensus       281 ~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~GRr~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l  357 (451)
T PF00083_consen  281 ENAGISNSFLAT---LILGLVNFLGTLLAIFLIDRFGRRKLLIIGLLLMAICSLILGIIFFLGVSSSSWWSILSIVFLAL  357 (451)
T ss_pred             cccccccccccc---cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccceeeee
Confidence            45677777 222   233355567777788999999998888777654443332221  111111100000111111111


Q ss_pred             HHhhhhhhhhhhhhhHHhhccCCcccchhHHHHHHHHHHHHHHHHHHH
Q 015168          316 VLSRLGHMSYDIVGAQILQTGIPSSKANLIGTTEISVASLVESVMLGV  363 (412)
Q Consensus       316 ~~sr~GLw~~dl~~~~l~Q~~vp~~~~G~v~g~~~sl~~~~~ll~~~~  363 (412)
                      .....+. .+......+..|..|.+.|++..|...+.+++...+....
T Consensus       358 ~~~~~~~-g~~~~~~~~~~ElfPt~~R~~~~~~~~~~~~i~~~i~~~~  404 (451)
T PF00083_consen  358 FFAFFSL-GWGPLPWIYTAELFPTKVRSTGIGLSYAVGRIGGFIIPFL  404 (451)
T ss_pred             ccccccc-cccccccccccccccccccccccccccccccccccccccc
Confidence            1112222 2333344566888999999999999999998766554433

Two such families have been found to occur ubiquitously in all classifications of living organisms. These are the ATP-binding cassette (ABC) superfamily and the major facilitator superfamily (MFS), also called the uniporter-symporter-antiporter family. While ABC family permeases are in general multicomponent primary active transporters, capable of transporting both small molecules and macromolecules in response to ATP hydrolysis the MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients. Although well over 100 families of transporters have now been recognised and classified, the ABC superfamily and MFS account for nearly half of the solute transporters encoded within the genomes of microorganisms. They are also prevalent in higher organisms. The importance of these two families of transport systems to living organisms can therefore not be overestimated []. The MFS was originally believed to function primarily in the uptake of sugars but subsequent studies revealed that drug efflux systems, Krebs cycle metabolites, organophosphate:phosphate exchangers, oligosaccharide:H1 symport permeases, and bacterial aromatic acid permeases were all members of the MFS. These observations led to the probability that the MFS is far more widespread in nature and far more diverse in function than had been thought previously. 17 subgroups of the MFS have been identified []. Evidence suggests that the MFS permeases arose by a tandem intragenic duplication event in the early prokaryotes. This event generated a 2-transmembrane-spanner (TMS) protein topology from a primordial 6-TMS unit. Surprisingly, all currently recognised MFS permeases retain the two six-TMS units within a single polypeptide chain, although in 3 of the 17 MFS families, an additional two TMSs are found []. Moreover, the well-conserved MFS specific motif between TMS2 and TMS3 and the related but less well conserved motif between TMS8 and TMS9 [] prove to be a characteristic of virtually all of the more than 300 MFS proteins identified.; GO: 0022857 transmembrane transporter activity, 0055085 transmembrane transport, 0016021 integral to membrane

>TIGR02718 sider_RhtX_FptX siderophore transporter, RhtX/FptX family

Probab=96.52  E-value=0.064  Score=53.78  Aligned_cols=116  Identities=13%  Similarity=0.003  Sum_probs=64.0

Q ss_pred             hhhhcchhccCCcHHHHHHHHHHHHHHHHHHHHHHHHHhccccccccchhHHHHHHHHHH-HHHHHHHhhhhhhhhcccc
Q 015168           13 GPLVGKLMDHSPRIPAYICLNTVQAAAQLLSAAMIIHAHTVIPTSSSMLLHPWFFVLVLA-GAVERLTGVALGVAVERDW   91 (412)
Q Consensus        13 g~~~G~~vDr~~R~~v~~~~~~~q~~~v~~s~~~~~~~~~~~~~~~~~~~~~l~~~~~~~-g~~~~l~~~a~~~ai~RDw   91 (412)
                      ....|.++||++++|++..+-+..... .  ...+........  .  . ..+......+ +.............+.|+ 
T Consensus       261 ~~~~g~l~~r~g~~~~l~~~~~~~~~~-~--~~~~~~~~~~~~--~--~-~~~~~~~~~~~~~~~g~~~~~~~~~~~~~-  331 (390)
T TIGR02718       261 CGGGAWLVRRAGLWRTFILGVGLAGSL-A--LLWFAQAAFWLA--P--G-IAVAWSCSAFGSLITGITSVAIYTAFMRF-  331 (390)
T ss_pred             HHHHHHHHHHhhHHHHHHHHHHHHHHH-H--HHHHHHHHcccC--C--c-HHHHHHHHHHHHHHHHHHHHHHHHHHHHH-
Confidence            567899999999999987765544221 1  110111110000  0  1 1111122122 222222222322233332 


Q ss_pred             eeeecCCCchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhcChhHHHHHHH
Q 015168           92 AVLLAGINRPIALAKANAVLNRIDLLCEIAGASLFGILLSKYEPVTCLKFAA  143 (412)
Q Consensus        92 v~~l~~~~~~~~L~~~Ns~l~~id~v~~llgP~lgG~L~~~~~~~~~~~~~~  143 (412)
                          ++++  ++-.+..+..+.+..++..+||.++|.+.+..|++..+.+.+
T Consensus       332 ----~~~~--~~~g~~~~~~~~~~~lg~~~g~~~~G~l~~~~G~~~~f~~~~  377 (390)
T TIGR02718       332 ----AGDG--DQAGTDVTAVQSTRDLGELIASSIAGYLTDRFGYAGGFLSGT  377 (390)
T ss_pred             ----hCcc--cchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHH
Confidence                2321  156777888888889999999999999999999887766543

RhtX from Sinorhizobium meliloti 2011 and FptX from Pseudomonas aeruginosa appear to be single polypeptide transporters, from the major facilitator family (see pfam07690) for import of siderophores as a means to import iron. This function was suggested by proximity to siderophore biosynthesis genes and then confirmed by study of knockout and heterologous expression phenotypes.

>COG2271 UhpC Sugar phosphate permease [Carbohydrate transport and metabolism]

Probab=96.48  E-value=0.028  Score=56.97  Aligned_cols=181  Identities=15%  Similarity=0.134  Sum_probs=114.3

Q ss_pred             HHhHHHHhcCCcchH-HHHHHHHHHHhhhccchHHHHHHHhcCCCCchhHHHhhHHHHHHHHHHHHHHHHHHHhchhhHH
Q 015168          201 KLGWKEYMQQPVLPA-SLAYVLLCLNVVLTPGSLMTAFLTQRGLNPSIIGGFSGLCASMGVAATFLSAYLVRRLGILKAG  279 (412)
Q Consensus       201 ~~g~~~~~~~~v~~~-~~~~a~l~~t~v~~~~~~~~~y~~~~gls~~~~G~~~~~~avggllGt~l~~~l~~R~g~~r~~  279 (412)
                      .+-|+.+ |-.+|.. -++++..|++ =-.|+-.++...++.|+|.+++|++-++-.+..=++-++.+.+..|.+.++-+
T Consensus        20 ~~~y~~~-r~qif~~~fiGYa~fYl~-RknF~~a~p~l~e~~~lsk~~lG~i~s~f~i~YG~sKf~~G~~sDr~npr~fm   97 (448)
T COG2271          20 DKTYKRW-RIQIFLSIFIGYAAFYLT-RKNFNLAMPALIEDGGLSKTQLGILGSAFSITYGVSKFVMGVLSDRSNPRYFM   97 (448)
T ss_pred             HHHHHHH-HHHHHHHHHHHHHHHHHH-HHhHhhccHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHhhhhcccCCCceee
Confidence            3445544 3345555 5578899965 24444445555567789999999999999999999999999999999999888


Q ss_pred             HHHHHHHHHHHHHHHHHHhcCCCcCcchHHHHHHHHHHhhhhh-hhhhhhhhHHhhccCCcccchhHHHHHHHHHHHHHH
Q 015168          280 AAGLIFQASLLAMAVAVYWSGSLSQQNPLLFFLCLIVLSRLGH-MSYDIVGAQILQTGIPSSKANLIGTTEISVASLVES  358 (412)
Q Consensus       280 ~~~~~~~~~~l~~~v~~~~~g~~~~~~~~~l~~~g~~~sr~GL-w~~dl~~~~l~Q~~vp~~~~G~v~g~~~sl~~~~~l  358 (412)
                      ..++..-.+   ..+.....      .++.++..-.++.+.-- |.++ .....+-..-|.+|||+.-++-+.-.|.-+.
T Consensus        98 ~~gLilsai---~nil~Gfs------~s~~~~~~l~~lng~fQg~Gwp-p~~~~i~~Wfsr~eRG~~~siWn~shNiGGa  167 (448)
T COG2271          98 AFGLILSAI---VNILFGFS------PSLFLFAVLWVLNGWFQGMGWP-PCARTITHWFSRKERGTWWSIWNTSHNIGGA  167 (448)
T ss_pred             hHHHHHHHH---HHHHHhhh------hHHHHHHHHHHHHHHHhcCCCc-HHHHHHHHHcCccccCceEEEehhhhhcccc
Confidence            777764322   22222111      12222211111111110 1233 3344556677999999999999999998666


Q ss_pred             HHHHHH---HhccCCCchhHHHHHHHHHHHHHHHHHHH
Q 015168          359 VMLGVA---IIANDVSHFGFLATLSLLSVVGAAWMFCH  393 (412)
Q Consensus       359 l~~~~~---~~~~~~~~f~~l~~~s~~~v~~~~~~~~~  393 (412)
                      +...++   ......+-......-++.++..+.+++..
T Consensus       168 l~~~~~~la~~~~~~~w~~~f~~pgiiaiival~~~~~  205 (448)
T COG2271         168 LAPLVALLAFFAFHGGWRAAFYFPGIIAIIVALILLFL  205 (448)
T ss_pred             hHHHHHHHHHHHhccchhHHHHHHHHHHHHHHHHHHHH
Confidence            666555   33344455555555666666666666553

>PRK15075 citrate-proton symporter; Provisional

Probab=96.45  E-value=0.17  Score=51.65  Aligned_cols=124  Identities=12%  Similarity=-0.023  Sum_probs=70.5

Q ss_pred             HHHHHHhcCCCCchhHHHh------hHHHHHHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHHhcCCCcCc--
Q 015168          234 MTAFLTQRGLNPSIIGGFS------GLCASMGVAATFLSAYLVRRLGILKAGAAGLIFQASLLAMAVAVYWSGSLSQQ--  305 (412)
Q Consensus       234 ~~~y~~~~gls~~~~G~~~------~~~avggllGt~l~~~l~~R~g~~r~~~~~~~~~~~~l~~~v~~~~~g~~~~~--  305 (412)
                      .+...++++.++.+.+.+.      +.+.++...|++..+++.+|+|++|...++.....+....+  .+.++. ...  
T Consensus        38 ~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ig~~~~G~l~Dr~Grr~~l~~~~~~~~~~~~l~--~~~~~~-~~~~~  114 (434)
T PRK15075         38 ATAIAKTFFPAGNEFASLMLTFAVFGAGFLMRPLGAIVLGAYIDRVGRRKGLIVTLSIMASGTLLI--AFVPGY-ATIGL  114 (434)
T ss_pred             HHHHHHHhCCCCCchHHHHHHHHHHHHHHHHhhhHHHHHHHHhhhhchHHHHHHHHHHHHHHHHHH--HhCCcH-HHHHH
Confidence            3333457898888776543      22233334688999999999999999887765432222221  222211 000  


Q ss_pred             chHHHHHHHHHHhhhhhhhhhhhhhHHhhccCCcccchhHHHHHHHHHHHHHHHH
Q 015168          306 NPLLFFLCLIVLSRLGHMSYDIVGAQILQTGIPSSKANLIGTTEISVASLVESVM  360 (412)
Q Consensus       306 ~~~~l~~~g~~~sr~GLw~~dl~~~~l~Q~~vp~~~~G~v~g~~~sl~~~~~ll~  360 (412)
                      .....+..+-++.++|.-........+..|..|+++||++.+.....++....+.
T Consensus       115 ~~~~~l~~~R~l~G~~~g~~~~~~~~~~~e~~p~~~rg~~~~~~~~~~~~g~~~g  169 (434)
T PRK15075        115 AAPLLVLLGRLLQGFSAGVELGGVSVYLAEIATPGRKGFYTSWQSASQQVAVVFA  169 (434)
T ss_pred             HHHHHHHHHHHHhhccccccHHHHHHHHHhhCCcccchHHHHHHHHHHHHHHHHH
Confidence            0000112222233333322223345678899999999999999888776544433

>TIGR00805 oat sodium-independent organic anion transporter

Probab=96.41  E-value=0.026  Score=61.01  Aligned_cols=134  Identities=16%  Similarity=0.057  Sum_probs=94.2

Q ss_pred             HHHHHHhcCCCCchhHHHhhHHHHHHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHH-hcCCC----------
Q 015168          234 MTAFLTQRGLNPSIIGGFSGLCASMGVAATFLSAYLVRRLGILKAGAAGLIFQASLLAMAVAVY-WSGSL----------  302 (412)
Q Consensus       234 ~~~y~~~~gls~~~~G~~~~~~avggllGt~l~~~l~~R~g~~r~~~~~~~~~~~~l~~~v~~~-~~g~~----------  302 (412)
                      .+..-++.++++.+.|++.+..-++..++.+..+++.+|.|+.|.+.++.....+..++...+. ..++-          
T Consensus        56 l~~iek~F~lss~~~G~i~s~~~i~~~~~~i~v~~~~~r~~r~~~i~~g~ll~~lg~ll~alphf~~~~y~~~~~~~~~~  135 (633)
T TIGR00805        56 LTTIERRFKLSTSSSGLINGSYEIGNLLLIIFVSYFGTKLHRPIVIGIGCAIMGLGSFLLSLPHFLSGRYSYSTTVSSTG  135 (633)
T ss_pred             chhhhhhhCCCCCcceeeeehhhHHHHHHHHHHHHhhcccCcceEEEecHHHHHHHHHHHhChHHhcCCccccccccccc
Confidence            3334457899999999999999999999999999999999999988777654333322222221 11100          


Q ss_pred             --c---------------------------C--cchHHHHHHHHHHhhhhhhhhhhhhhHHhhccCCcccchhHHHHHHH
Q 015168          303 --S---------------------------Q--QNPLLFFLCLIVLSRLGHMSYDIVGAQILQTGIPSSKANLIGTTEIS  351 (412)
Q Consensus       303 --~---------------------------~--~~~~~l~~~g~~~sr~GLw~~dl~~~~l~Q~~vp~~~~G~v~g~~~s  351 (412)
                        +                           .  .....+++.+-++.++|.-..-.....++.+++|+++|++..|...+
T Consensus       136 ~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~GiG~~~~~~~~~~~i~d~~~~~~~~~~~~i~~~  215 (633)
T TIGR00805       136 NLSSANSFLCMENLTQALRPTQCPSECQKQHKESLMWLLFLVSQLLRGIGATPIFPLGISYIDDFAKSKNSPLYIGILES  215 (633)
T ss_pred             cccccccccccCCCCCCccccccccccccccCCCceehhhHHHHHHHhccCCcchhcCchhhhccCCccccHHHHHHHHH
Confidence              0                           0  01233444566666666655556667888999999999999999999


Q ss_pred             HHHHHHHHHHHHHHhc
Q 015168          352 VASLVESVMLGVAIIA  367 (412)
Q Consensus       352 l~~~~~ll~~~~~~~~  367 (412)
                      .......+.+.++...
T Consensus       216 ~~~iG~~lG~llgg~l  231 (633)
T TIGR00805       216 IAVFGPAFGYLLGSFC  231 (633)
T ss_pred             HHHhhhHHHHHHHHHH
Confidence            9988777777776543

Proteins of the OAT family catalyze the Na+-independent facilitated transport of organic anions such as bromosulfobromophthalein and prostaglandins as well as conjugated and unconjugated bile acids (taurocholate and cholate, respectively). These transporters have been characterized in mammals, but homologues are present in C. elegans and A. thaliana. Some of the mammalian proteins exhibit a high degree of tissue specificity. For example, the rat OAT is found at high levels in liver and kidney and at lower levels in other tissues. These proteins possess 10-12 putative a-helical transmembrane spanners. They may catalyze electrogenic anion uniport or anion exchange.

>TIGR00902 2A0127 phenyl proprionate permease family protein

Probab=96.40  E-value=0.14  Score=51.23  Aligned_cols=47  Identities=21%  Similarity=0.251  Sum_probs=41.7

Q ss_pred             cchHHHHHHHhcCCCCchhHHHhhHHHHHHHHHHHHHHHHHHHhchh
Q 015168          230 PGSLMTAFLTQRGLNPSIIGGFSGLCASMGVAATFLSAYLVRRLGIL  276 (412)
Q Consensus       230 ~~~~~~~y~~~~gls~~~~G~~~~~~avggllGt~l~~~l~~R~g~~  276 (412)
                      +.+..+.|++++|+|+.++|+..+...+....+..+.+.+.+|+|+.
T Consensus        23 ~~p~l~~~l~~~g~s~~~ig~~~s~~~~~~~~~~~~~g~l~d~~~~~   69 (382)
T TIGR00902        23 FLPFFPAWLKGIGLGEEMIGLLIGAALIARFAGGLFFAPLIKDANHI   69 (382)
T ss_pred             HHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcH
Confidence            34457788999999999999999999999999999999999999863

This family of proteins is involved in the uptake of 3-phenylpropionic acid. This uptake mechanism is for the metabolism of phenylpropanoid compounds and plays an important role in the natural degradative cycle of these aromatic molecules.

>PF06609 TRI12: Fungal trichothecene efflux pump (TRI12); InterPro: IPR010573 This family consists of several fungal specific trichothecene efflux pump proteins

Probab=96.32  E-value=0.16  Score=54.36  Aligned_cols=133  Identities=16%  Similarity=0.112  Sum_probs=79.7

Q ss_pred             HhcCCcchHHHHHHHH-HHHh--hhccchHHHHHHH-hcCCCCchhHHHhhHHHHHHHHHHHHHHHHHHHhchhhHHHHH
Q 015168          207 YMQQPVLPASLAYVLL-CLNV--VLTPGSLMTAFLT-QRGLNPSIIGGFSGLCASMGVAATFLSAYLVRRLGILKAGAAG  282 (412)
Q Consensus       207 ~~~~~v~~~~~~~a~l-~~t~--v~~~~~~~~~y~~-~~gls~~~~G~~~~~~avggllGt~l~~~l~~R~g~~r~~~~~  282 (412)
                      |++.|.+.+.++...+ +...  +....+-...|+. +.|=++ ...++-....++.-.+..+.+++...+|++.....+
T Consensus        36 ~~~s~~~i~~~~~~~~~~~~~~~~~~~~a~~l~~I~~diG~~~-~~~w~~~~~~l~~av~~~~~G~LSDlfGRr~~~i~g  114 (599)
T PF06609_consen   36 YYRSPRFIASFAAFSLAVIAAYFVLVLPASILPYINADIGGSD-NWSWFSTAWTLASAVSFPFVGRLSDLFGRRYFFIIG  114 (599)
T ss_pred             ceeCHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHhcCCCc-cchHHHHHHHHHHHHHHHhhHHHHHHhcchHHHHHH
Confidence            4577888776542222 2110  1222222234665 577654 478888888888888889999999999997776655


Q ss_pred             HHHHHHHHHHHHHHHhcCCCcCcchHHHHHHHHHHhhhhhhhhhhhhhHHhhccCCcccchhHHHHHH
Q 015168          283 LIFQASLLAMAVAVYWSGSLSQQNPLLFFLCLIVLSRLGHMSYDIVGAQILQTGIPSSKANLIGTTEI  350 (412)
Q Consensus       283 ~~~~~~~l~~~v~~~~~g~~~~~~~~~l~~~g~~~sr~GLw~~dl~~~~l~Q~~vp~~~~G~v~g~~~  350 (412)
                      ..+   ..+..+.....      ..+-.+..|.++.++|- ..........+|.+|.+.|+...+...
T Consensus       115 ~~l---~vvG~Iv~atA------~~~~~~iag~~l~Gvga-G~~~~~~~~isEl~p~k~R~~~~~~~~  172 (599)
T PF06609_consen  115 SLL---GVVGSIVCATA------QNMNTFIAGMVLYGVGA-GVQELAALAISELVPNKWRGLGLAIAS  172 (599)
T ss_pred             HHH---HHhHHHHhhcC------CcHHHHHHHHHHHHHhh-HHHHHHHHHHHHhcccchhhhHhHHHH
Confidence            443   22222111111      12333445666667665 444455556899999998887665444

Many of the genes involved in trichothecene toxin biosynthesis in Fusarium sporotrichioides are present within a gene cluster. It has been suggested that TRI12 may play a role in F. sporotrichioides self-protection against trichothecenes [].

>PRK10429 melibiose:sodium symporter; Provisional

Probab=96.28  E-value=0.11  Score=53.92  Aligned_cols=123  Identities=15%  Similarity=0.125  Sum_probs=75.1

Q ss_pred             HHHHHH-hcCCCCchhHHHhhHHHHHHHHHHHHHHHHHH----HhchhhH-HHHHHHHHHHHHHHHHHHHhcCCCcCcch
Q 015168          234 MTAFLT-QRGLNPSIIGGFSGLCASMGVAATFLSAYLVR----RLGILKA-GAAGLIFQASLLAMAVAVYWSGSLSQQNP  307 (412)
Q Consensus       234 ~~~y~~-~~gls~~~~G~~~~~~avggllGt~l~~~l~~----R~g~~r~-~~~~~~~~~~~l~~~v~~~~~g~~~~~~~  307 (412)
                      ...|.+ ..|+|+..+|.++.+.-+-......+.+.+..    |+|++|- ++++....   .+.....+.+...+....
T Consensus        29 l~~yyt~v~Gls~~~vg~i~~i~ri~dai~dp~~G~lsD~t~sr~Grrrp~il~g~i~~---~i~~~llf~~p~~~~~~~  105 (473)
T PRK10429         29 LMYYYTDVVGLSVGLVGTLFLVARIWDAINDPIMGWIVNNTRSRWGKFKPWILIGTLAN---SVVLFLLFSAHLFEGTAQ  105 (473)
T ss_pred             HHHHHHHhcCCCHHHHHHHHHHHHHHHHHhhchheeehhcCCCCCCCcchhHhhhhHHH---HHHHHHHHcCCCCCccHH
Confidence            344554 57999999999999988888888888888877    5688554 44443322   222122232221111111


Q ss_pred             HHHHHHHHHHhhhhhhhhhhhhhHHhhccC-CcccchhHHHHHHHHHHHHHHH
Q 015168          308 LLFFLCLIVLSRLGHMSYDIVGAQILQTGI-PSSKANLIGTTEISVASLVESV  359 (412)
Q Consensus       308 ~~l~~~g~~~sr~GLw~~dl~~~~l~Q~~v-p~~~~G~v~g~~~sl~~~~~ll  359 (412)
                      ...+.....+..++.-.+++....+.-+.+ ++++|.++++..+...+....+
T Consensus       106 ~~~~~~~~~l~~~~~t~~~ip~~al~~~lt~~~~eR~~l~~~~~~~~~ig~~~  158 (473)
T PRK10429        106 YVFVCVTYILWGMTYTIMDIPFWSLVPTLTLDKREREQLVPYPRFFASLAGFV  158 (473)
T ss_pred             HHHHHHHHHHHHHHHHHHcchHHhhhHHhCCCHHHHHHHHHHHHHHHHHHHHH
Confidence            222222222334455567888888888877 6899999999876666554333

>TIGR00883 2A0106 metabolite-proton symporter

Probab=96.19  E-value=0.15  Score=50.15  Aligned_cols=119  Identities=10%  Similarity=-0.031  Sum_probs=68.8

Q ss_pred             CCCchhHHHhhH-----HHHHHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHHhcCCCcCc--chHHHHHHHH
Q 015168          243 LNPSIIGGFSGL-----CASMGVAATFLSAYLVRRLGILKAGAAGLIFQASLLAMAVAVYWSGSLSQQ--NPLLFFLCLI  315 (412)
Q Consensus       243 ls~~~~G~~~~~-----~avggllGt~l~~~l~~R~g~~r~~~~~~~~~~~~l~~~v~~~~~g~~~~~--~~~~l~~~g~  315 (412)
                      .++++.|...+.     +-++..+|+.+.+++.+|+|++|....+.....+....+  .+.+ +....  ....++..+-
T Consensus        27 ~~~~~~~~~~~~~~~~~~~~~~~i~~~~~G~l~dr~g~r~~l~~~~~~~~~~~~~~--~~~~-~~~~~~~~~~~~~~~~r  103 (394)
T TIGR00883        27 SGDPLVALLATFATFAAGFLARPLGAIVFGHFGDRIGRKKTLVITLLMMGIGTLLI--GLLP-SYATIGIWAPILLLLAR  103 (394)
T ss_pred             CCChHHHHHHHHHHHHHHHHHhhhHHHHhhhhhhhhhhHHHHHHHHHHHHHHHHHH--hhCC-ChhhhHHHHHHHHHHHH
Confidence            556777775544     333445788999999999999999887765433322221  2222 10000  0011122222


Q ss_pred             HHhhhhhhhhhhhhhHHhhccCCcccchhHHHHHHHHHHHHHHHHHHHH
Q 015168          316 VLSRLGHMSYDIVGAQILQTGIPSSKANLIGTTEISVASLVESVMLGVA  364 (412)
Q Consensus       316 ~~sr~GLw~~dl~~~~l~Q~~vp~~~~G~v~g~~~sl~~~~~ll~~~~~  364 (412)
                      ++.++|.-........+.-+..|+++||+.++...........+...+.
T Consensus       104 ~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~G~~i~~~~~  152 (394)
T TIGR00883       104 LIQGFSLGGEWGGAALYLAEYAPPGKRGFYGSFQQVGAPVGLLLAALTV  152 (394)
T ss_pred             HHHHhhccccccccHHHhhhcCCcccchHHHHHHHHHHHHHHHHHHHHH
Confidence            2333333224455566777888999999999998887776555544443

This model represents the metabolite:H+ symport subfamily of the major facilitator superfamily (pfam00083), including citrate-H+ symporters, dicarboxylate:H+ symporters, the proline/glycine-betaine transporter ProP, etc.

>KOG2563 consensus Permease of the major facilitator superfamily [General function prediction only]

Probab=96.12  E-value=1.6  Score=44.96  Aligned_cols=192  Identities=12%  Similarity=0.046  Sum_probs=104.1

Q ss_pred             HHHhHHHHhcCCcchHHHHHHHHHHHhhhccchHHHHHH---HhcCCCCchhHHHhhHHHHHHHHHHHHHHHHHHHhchh
Q 015168          200 IKLGWKEYMQQPVLPASLAYVLLCLNVVLTPGSLMTAFL---TQRGLNPSIIGGFSGLCASMGVAATFLSAYLVRRLGIL  276 (412)
Q Consensus       200 ~~~g~~~~~~~~v~~~~~~~a~l~~t~v~~~~~~~~~y~---~~~gls~~~~G~~~~~~avggllGt~l~~~l~~R~g~~  276 (412)
                      ..++.+..++++.|.-.+..-.  +. ...|.++.+..-   .-.|++...-|.......++|++|+.+.+.+..|.+.-
T Consensus       255 f~~si~~~~~n~~F~il~~~yg--i~-~g~F~~l~~~l~~~l~~sgY~~~~aG~ig~l~iv~Gmlga~~~gii~Dktk~f  331 (480)
T KOG2563|consen  255 FPKSIKSCFKNRQFIILAICYG--IG-LGLFNSLSTLLNLALCPSGYEGVFAGYIGALMIVAGMLGALASGIIADKTKKF  331 (480)
T ss_pred             HHHHHHHHHcCccHHHHHHHHh--hh-HHHHHHHHHHhhhccccccCCccccchhHHHHHHHHHHHHHHHHhhhhhhhhH
Confidence            4567888899988765221111  11 122333344332   24688888889999999999999999999998887765


Q ss_pred             hHHH-HHHHHHHHHHHHHHHHHhcCCCcCcchHHHHHHHHHHhhhhhhhhhhhhhHHhhccCCcccchhHHHHHHHHHHH
Q 015168          277 KAGA-AGLIFQASLLAMAVAVYWSGSLSQQNPLLFFLCLIVLSRLGHMSYDIVGAQILQTGIPSSKANLIGTTEISVASL  355 (412)
Q Consensus       277 r~~~-~~~~~~~~~l~~~v~~~~~g~~~~~~~~~l~~~g~~~sr~GLw~~dl~~~~l~Q~~vp~~~~G~v~g~~~sl~~~  355 (412)
                      |... +....-..+ .++.......+   ...++++..+....-.+.-.++ .-..+--|.+.|..=|.-+|+.+..-+.
T Consensus       332 k~~~~v~~~~~~v~-~~~l~~~t~~~---~~~viv~~t~~~~g~~~~~~~P-ig~ElgvE~TyPv~E~tSsGll~~~gq~  406 (480)
T KOG2563|consen  332 KLTTLVLYLFALVG-TLMLLTCTLFL---GDSVIVFTTCGLLGFFGTGYLP-IGFELGVETTYPVAEGTSSGLLNLSGQI  406 (480)
T ss_pred             HHHHHHHHHHHHHH-HHHHHHhhccC---CceEehhhhHHHHHHhhcCCCC-cceeeeeeeccccCCcccceeEEeehhH
Confidence            5433 222221111 11111211221   1122222221111111221233 3334445666555555556666666665


Q ss_pred             -HHHHHHHHHHhccCCC----chhHHHHHHHHHHHHHH-HHHHHHhcCCC
Q 015168          356 -VESVMLGVAIIANDVS----HFGFLATLSLLSVVGAA-WMFCHWLLNPT  399 (412)
Q Consensus       356 -~~ll~~~~~~~~~~~~----~f~~l~~~s~~~v~~~~-~~~~~~~~~~~  399 (412)
                       .-..-+.+.....+++    +++..+.+....++... ..++.+.+|++
T Consensus       407 f~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~l~~~lva~~r~~y~R~  456 (480)
T KOG2563|consen  407 FGVILVFIMGILAEDLGPPGNTFPANIFLTVSALLGAILVAFFRPDYRRL  456 (480)
T ss_pred             HHHHHHHHHHHHhhccCCCCCCccchhHhHHHHHHHHHHHhhhhhhHHhH
Confidence             4444555677778888    88888888777665444 34444444433

>PRK09952 shikimate transporter; Provisional

Probab=96.01  E-value=0.28  Score=50.25  Aligned_cols=116  Identities=9%  Similarity=-0.004  Sum_probs=65.7

Q ss_pred             CCCCchhHHHh-----hHHHHHHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHHhcCCCc-CcchHHHHHHHH
Q 015168          242 GLNPSIIGGFS-----GLCASMGVAATFLSAYLVRRLGILKAGAAGLIFQASLLAMAVAVYWSGSLS-QQNPLLFFLCLI  315 (412)
Q Consensus       242 gls~~~~G~~~-----~~~avggllGt~l~~~l~~R~g~~r~~~~~~~~~~~~l~~~v~~~~~g~~~-~~~~~~l~~~g~  315 (412)
                      +.++. .|...     +++-++..+|+++.+++.+|+|++|....+......+...+  .+.+.-.. .......+...=
T Consensus        56 ~~~~~-~~~~~~~~~~~~~~~~~~~g~~~~G~l~Dr~Grr~~l~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~l~~~R  132 (438)
T PRK09952         56 QVSPA-MGTLAAFATFGVGFLFRPLGGVVFGHFGDRLGRKRMLMLTVWMMGIATALI--GLLPSFSTIGWWAPVLLVTLR  132 (438)
T ss_pred             CCCcH-HHHHHHHHHHHHHHHHHhhHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHH--hcCCcHHHHHHHHHHHHHHHH
Confidence            67777 56653     34445567899999999999999999887765433322221  22221100 000011111222


Q ss_pred             HHhhhhhhhhhhhhhHHhhccCCcccchhHHHHHHHHHHHHHHHH
Q 015168          316 VLSRLGHMSYDIVGAQILQTGIPSSKANLIGTTEISVASLVESVM  360 (412)
Q Consensus       316 ~~sr~GLw~~dl~~~~l~Q~~vp~~~~G~v~g~~~sl~~~~~ll~  360 (412)
                      ++.++|.-..-.+...+..|..|+++||++++....-.....++.
T Consensus       133 ~l~G~~~g~~~~~~~~~~~e~~p~~~rg~~~~~~~~g~~~G~~l~  177 (438)
T PRK09952        133 AIQGFAVGGEWGGAALLAVESAPKNKKAFYSSGVQVGYGVGLLLS  177 (438)
T ss_pred             HHHHhhhcccHHHHHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHH
Confidence            222333322334456778889999999999887766555444333

>KOG3626 consensus Organic anion transporter [Secondary metabolites biosynthesis, transport and catabolism]

Probab=95.91  E-value=0.36  Score=52.56  Aligned_cols=81  Identities=12%  Similarity=0.239  Sum_probs=64.1

Q ss_pred             hHHHHHHhHHHHhcCCcchHHHHHHHHHHHhhhccchHHHHHHH-hcCCCCchhHHHhhHHHHHHH-HHHHHHHHHHHHh
Q 015168          196 GIEAIKLGWKEYMQQPVLPASLAYVLLCLNVVLTPGSLMTAFLT-QRGLNPSIIGGFSGLCASMGV-AATFLSAYLVRRL  273 (412)
Q Consensus       196 ~~~~~~~g~~~~~~~~v~~~~~~~a~l~~t~v~~~~~~~~~y~~-~~gls~~~~G~~~~~~avggl-lGt~l~~~l~~R~  273 (412)
                      ..++...-.+.+++||++.-......+....+.++-..++=|++ +.|.|++.--.+.|..++.+. +|.++.+++.||+
T Consensus       377 ~ikdfp~s~~~ll~N~if~~~~l~~~~~~~~~~G~~tFlPKyLE~Qfg~sas~An~l~G~i~vp~~~~Gi~lGG~iikkf  456 (735)
T KOG3626|consen  377 KIKDFPKSIKRLLSNPIFMLVVLASVIESLAITGYITFLPKYLETQFGISASLANILTGSIGVPAAAVGIFLGGLIIKKF  456 (735)
T ss_pred             hHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHhhHHHhhHHHHHHHcCCCHHHHHHHhhhhhhhhhhhhhhccceeeeee
Confidence            45677778889999999998666666664334666666778997 579999999999977766655 8999999999998


Q ss_pred             chh
Q 015168          274 GIL  276 (412)
Q Consensus       274 g~~  276 (412)
                      .+.
T Consensus       457 kl~  459 (735)
T KOG3626|consen  457 KLS  459 (735)
T ss_pred             ccc
Confidence            775

>PRK10642 proline/glycine betaine transporter; Provisional

Probab=95.83  E-value=0.57  Score=48.74  Aligned_cols=101  Identities=9%  Similarity=-0.047  Sum_probs=61.6

Q ss_pred             hhHHHHHHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHHhcCCCc--CcchHHHHHHHHHHhhhhhhhhhhhh
Q 015168          252 SGLCASMGVAATFLSAYLVRRLGILKAGAAGLIFQASLLAMAVAVYWSGSLS--QQNPLLFFLCLIVLSRLGHMSYDIVG  329 (412)
Q Consensus       252 ~~~~avggllGt~l~~~l~~R~g~~r~~~~~~~~~~~~l~~~v~~~~~g~~~--~~~~~~l~~~g~~~sr~GLw~~dl~~  329 (412)
                      +++.-++..+|+++.+++.+|+|++|+..++.....+....+  .+.++-..  .+.+. ++..+=++.++|.-..-.+.
T Consensus        63 ~~~~~l~~~ig~~~~G~l~Dr~Grr~~l~~~~~l~~i~~~~~--a~~~~~~~~g~~a~~-~l~~~R~l~G~g~g~~~~~~  139 (490)
T PRK10642         63 FSVPFLIRPLGGLFFGMLGDKYGRQKILAITIVIMSISTFCI--GLIPSYATIGIWAPI-LLLLCKMAQGFSVGGEYTGA  139 (490)
T ss_pred             HHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHH--HhcccHHHHHHHHHH-HHHHHHHHHHhHhHhhHHHH
Confidence            567778888999999999999999999988876543332222  22221100  00011 11122222233332233456


Q ss_pred             hHHhhccCCcccchhHHHHHHHHHHH
Q 015168          330 AQILQTGIPSSKANLIGTTEISVASL  355 (412)
Q Consensus       330 ~~l~Q~~vp~~~~G~v~g~~~sl~~~  355 (412)
                      ..+..|..|+++||++.+........
T Consensus       140 ~~~~~e~~p~~~Rg~~~~~~~~~~~~  165 (490)
T PRK10642        140 SIFVAEYSPDRKRGFMGSWLDFGSIA  165 (490)
T ss_pred             HHHHHHhCCCCCCcHHHHHHHHHHHH
Confidence            67888899999999998887655443

>PF06813 Nodulin-like: Nodulin-like; InterPro: IPR010658 This entry represents a conserved region within plant nodulin-like proteins and a number of uncharacterised proteins

Probab=95.76  E-value=1.1  Score=42.63  Aligned_cols=146  Identities=13%  Similarity=0.090  Sum_probs=85.1

Q ss_pred             HHHHH---HH-hcCCCCchhHHHhhHHHHHHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHHhcCCCcCcchH
Q 015168          233 LMTAF---LT-QRGLNPSIIGGFSGLCASMGVAATFLSAYLVRRLGILKAGAAGLIFQASLLAMAVAVYWSGSLSQQNPL  308 (412)
Q Consensus       233 ~~~~y---~~-~~gls~~~~G~~~~~~avggllGt~l~~~l~~R~g~~r~~~~~~~~~~~~l~~~v~~~~~g~~~~~~~~  308 (412)
                      ..-.|   +| .+|+|.+++-.+-..+-+|+-+| +..+.+..|+|...+..+|...... .-...-....+..+ ..+.
T Consensus        20 ~Fs~yS~~Lk~~l~~sq~~l~~l~~~~~~G~~~G-~~~G~l~d~~gp~~~l~iG~~~~~~-GY~~~~l~~~~~i~-~~~~   96 (250)
T PF06813_consen   20 TFSAYSPQLKSRLGYSQSQLNTLSTAGDIGSYFG-ILAGLLYDRFGPWVVLLIGAVLGFV-GYGLLWLAVSGRIP-SLPV   96 (250)
T ss_pred             chhhhhHHHHHHhCCCHHHHHHHHHHHHHHhhcc-HHHHHHHHhcchHHHHHHHHHHHHH-HHHHHHHHHhCccC-ccch
Confidence            34445   44 48999999999999999998876 8889999999998887777653322 22222222233221 0111


Q ss_pred             HHHHHHHHHhhhhhhhhhh-hhhHHhhccCCcccchhHHHHHHHHHHHHHHHHHHHHHhccCCCchhHHHHHHHHH
Q 015168          309 LFFLCLIVLSRLGHMSYDI-VGAQILQTGIPSSKANLIGTTEISVASLVESVMLGVAIIANDVSHFGFLATLSLLS  383 (412)
Q Consensus       309 ~l~~~g~~~sr~GLw~~dl-~~~~l~Q~~vp~~~~G~v~g~~~sl~~~~~ll~~~~~~~~~~~~~f~~l~~~s~~~  383 (412)
                      ..+..-..+...|--.+|. +...-.+.  .|++||++.|+.-+..-+.+.+-..+--.+..+++-..+...++..
T Consensus        97 ~~~~~~~~l~~~s~~~~~ta~lvt~~~N--FP~~RG~vvgilk~~~GLSaai~t~i~~~~f~~~~~~fll~la~~~  170 (250)
T PF06813_consen   97 WLMCLFLFLGGNSSCWFNTASLVTCVRN--FPRSRGTVVGILKGFFGLSAAIFTQIYSAFFGDDPSSFLLFLAVLP  170 (250)
T ss_pred             HHHHHHHHHHcccHHHhhhHHHHHHHHh--CccccCceehhhhHHHHhHHHHHHHHHHHHcCCChHHHHHHHHHHH
Confidence            1111111222333312343 34445555  5678999999999988876555555533333335445555555443

>PRK09669 putative symporter YagG; Provisional

Probab=95.72  E-value=0.15  Score=52.34  Aligned_cols=121  Identities=10%  Similarity=0.074  Sum_probs=71.0

Q ss_pred             HHHHHHhcCCCCchhHHHhhHHHHHHHHHHHHHHHHHHH----hchhhH-HHHHHHHHHHHHHHHHHHHhcCCCcCcch-
Q 015168          234 MTAFLTQRGLNPSIIGGFSGLCASMGVAATFLSAYLVRR----LGILKA-GAAGLIFQASLLAMAVAVYWSGSLSQQNP-  307 (412)
Q Consensus       234 ~~~y~~~~gls~~~~G~~~~~~avggllGt~l~~~l~~R----~g~~r~-~~~~~~~~~~~l~~~v~~~~~g~~~~~~~-  307 (412)
                      ++.|.+..|+|+...|.++.+..+...+...+.+.+..|    +|++|- +.++...   ..+.....++.+..+.... 
T Consensus        33 ~~~~t~~~gls~~~~g~i~~i~~i~dai~dp~~G~lsD~~~~r~Grrrp~il~~~~~---~~i~~~l~f~~p~~~~~~~~  109 (444)
T PRK09669         33 AYFYTDVFGLSAAIMGTMFLVVRVLDAVTDPLMGALVDRTRTRHGQFRPYLLWFAIP---FGVVCLLTFYTPDFGATGKI  109 (444)
T ss_pred             HHHHHHhcCCCHHHHHHHHHHHHHHHHcccceeeEeeecCCCCCCCcchhHHHHHHH---HHHHHHHHHhCCCCCcchHH
Confidence            333445699999999999999998888888888888776    666554 3334322   1122222233322111111 


Q ss_pred             HHHHHHHHHHhhhhhhhhhhhhhHHhhccC-CcccchhHHHHHHHHHHHHHH
Q 015168          308 LLFFLCLIVLSRLGHMSYDIVGAQILQTGI-PSSKANLIGTTEISVASLVES  358 (412)
Q Consensus       308 ~~l~~~g~~~sr~GLw~~dl~~~~l~Q~~v-p~~~~G~v~g~~~sl~~~~~l  358 (412)
                      .+.+...+. ...+...+++....+.-|.+ ++++|++.++......+....
T Consensus       110 ~~~~~~~~l-~~~~~t~~~ip~~al~~~~t~~~~eR~~l~~~r~~~~~~G~~  160 (444)
T PRK09669        110 IYACVTYIL-LSLVYTAINVPYCAMPGAITNDPRERHSLQSWRFALSFIGGL  160 (444)
T ss_pred             HHHHHHHHH-HHHHHHhhcchHHHhHHHhcCCHHHHHHHHHHHHHHHHHHHH
Confidence            222222222 23344457777777766665 668899988887766665333

>COG0738 FucP Fucose permease [Carbohydrate transport and metabolism]

Probab=95.71  E-value=0.65  Score=47.05  Aligned_cols=130  Identities=12%  Similarity=0.062  Sum_probs=90.1

Q ss_pred             ccchHHHHHHHhcCCCCchhHHHhhHHHHHHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHHhcCCCcCcchH
Q 015168          229 TPGSLMTAFLTQRGLNPSIIGGFSGLCASMGVAATFLSAYLVRRLGILKAGAAGLIFQASLLAMAVAVYWSGSLSQQNPL  308 (412)
Q Consensus       229 ~~~~~~~~y~~~~gls~~~~G~~~~~~avggllGt~l~~~l~~R~g~~r~~~~~~~~~~~~l~~~v~~~~~g~~~~~~~~  308 (412)
                      ..|.+.+-+.+..+++..+.+++.-+-=.|..++++-++++.||+|.++.+..|+..   +.+.| ..+||-+  .....
T Consensus        31 l~diLip~l~~~f~ls~~~a~liqfaff~gYf~~~lpa~~~~kk~gyk~gi~lgL~l---~avg~-~lF~pAa--~~~~y  104 (422)
T COG0738          31 LNDILIPHLKEVFDLTYFEASLIQFAFFGGYFIMSLPAGLLIKKLGYKAGIVLGLLL---YAVGA-ALFWPAA--SSKSY  104 (422)
T ss_pred             cchhhHHHHHHHhCccHHHHHHHHHHHHHHHHHHhccHHHHHHHhhhHHHHHHHHHH---HHHHH-HHHhhhh--hhhhH
Confidence            345555556667999999999999999999999999999999999999998888763   32332 2233211  11234


Q ss_pred             HHHHHHHHHhhhhhhhhhhhhhHHhhccCCcccchhHHHHHHHHHHHHHHHHHHHH
Q 015168          309 LFFLCLIVLSRLGHMSYDIVGAQILQTGIPSSKANLIGTTEISVASLVESVMLGVA  364 (412)
Q Consensus       309 ~l~~~g~~~sr~GLw~~dl~~~~l~Q~~vp~~~~G~v~g~~~sl~~~~~ll~~~~~  364 (412)
                      ..|+.++.....|+-..+.+.+.++-..-||+...+=-....+.|.+-..+.+..+
T Consensus       105 ~~FL~~lFila~Gi~~LetaaNp~v~~lg~~~~a~~rlnl~q~fn~lGa~~gp~~g  160 (422)
T COG0738         105 GFFLVALFILASGIGLLETAANPYVTLLGKPESAAFRLNLAQAFNGLGAILGPLLG  160 (422)
T ss_pred             HHHHHHHHHHHhhhHHHHhccchHHHHhCCchhHHHHHHHHHHhhhhHHHHHHHHH
Confidence            45555666666677779999988888877776555555555566665555555444

>PTZ00207 hypothetical protein; Provisional

Probab=95.60  E-value=2.1  Score=45.90  Aligned_cols=116  Identities=11%  Similarity=-0.046  Sum_probs=67.4

Q ss_pred             HhhhhhcchhccCCcHHHHHHHHHHHHHHHHHHHHHHHHHhccccccccchhHHHHHHHHHHHHHHHHHhhhhhhhhccc
Q 015168           11 VGGPLVGKLMDHSPRIPAYICLNTVQAAAQLLSAAMIIHAHTVIPTSSSMLLHPWFFVLVLAGAVERLTGVALGVAVERD   90 (412)
Q Consensus        11 l~g~~~G~~vDr~~R~~v~~~~~~~q~~~v~~s~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~l~~~a~~~ai~RD   90 (412)
                      .+.++.|.+.||++||+++..+.+.-.+.    +....+..... ...  ..+.+++.-++.|..+..++++....+.+ 
T Consensus        76 ~~~lp~G~L~Dr~G~R~vllig~ll~~iG----~ll~ala~~~~-i~~--s~~~l~l~r~l~G~G~~~~~~~~~~~i~~-  147 (591)
T PTZ00207         76 YFLLPYSFIYDYLGPRPIFVLSMTVFCLG----TLLFALTFQEV-IEG--SVVRLSVYNGLMTLGCMLFDLGAVVTVLS-  147 (591)
T ss_pred             HHHHHHHHHHHHhCcHHHHHHHHHHHHHH----HHHHHHHhccc-ccC--cHHHHHHHHHHHHHHHHHHHHHHHHHHHH-
Confidence            34558899999999999988876544322    22111111110 000  11334444456666666666666666654 


Q ss_pred             ceeeecCCCchhhhHHHHHHHHHHHHHHH-HHHHHHHHHHHhhcChhHHHHHHHH
Q 015168           91 WAVLLAGINRPIALAKANAVLNRIDLLCE-IAGASLFGILLSKYEPVTCLKFAAG  144 (412)
Q Consensus        91 wv~~l~~~~~~~~L~~~Ns~l~~id~v~~-llgP~lgG~L~~~~~~~~~~~~~~~  144 (412)
                      |.|    +    +-.++.+.+.....++. +++|...+.+.  .+|...+++.+.
T Consensus       148 ~Fp----~----~RG~a~Gi~~~~~gLGsaI~~~l~~~l~~--~~~~~~fl~l~v  192 (591)
T PTZ00207        148 VFP----S----NRGAVVAIMKTFTGLGSAILGSIQLAFFS--DNTSAYFFFLMS  192 (591)
T ss_pred             hCh----h----hhHHHHHHHHHHHHHHHHHHHHHHHHHHH--HhHHHHHHHHHH
Confidence            654    3    23668888888888887 46666666654  356665555433

>KOG2532 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]

Probab=95.52  E-value=0.25  Score=51.51  Aligned_cols=115  Identities=14%  Similarity=0.017  Sum_probs=77.7

Q ss_pred             hcCCCCchhHHHhhHHHHHHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHHhcCCCcCcchHHHHHHHHHHhh
Q 015168          240 QRGLNPSIIGGFSGLCASMGVAATFLSAYLVRRLGILKAGAAGLIFQASLLAMAVAVYWSGSLSQQNPLLFFLCLIVLSR  319 (412)
Q Consensus       240 ~~gls~~~~G~~~~~~avggllGt~l~~~l~~R~g~~r~~~~~~~~~~~~l~~~v~~~~~g~~~~~~~~~l~~~g~~~sr  319 (412)
                      +.+.++.+-|++++..+.|.+++.+-.+.+.+|+|.+++..++.....+.  ..+.+......  ...+++   .=++.+
T Consensus        67 ~~~ws~~~k~~i~ss~~~G~i~~~iP~g~l~~k~G~r~v~~~~~~~sa~~--t~l~P~aa~~~--~~~~~~---~R~lqG  139 (466)
T KOG2532|consen   67 EYDWSSTEKGLIFSSFFWGYILGQIPGGYLADKFGARRVFFISGLISALL--TLLTPLAASIG--FYLLLV---LRFLQG  139 (466)
T ss_pred             eecCCHHHHHHHHHHHHHHHHHHHcCcHHHHHHcCchHHHHHHHHHHHHH--HHHHHHHHHhc--chhhHH---HHHHhH
Confidence            47889999999999999999999999999999999999988776543322  11112221110  011111   111122


Q ss_pred             hhhhhhhhhhhHHhhccCCcccchhHHHHHHHHHHHHHHHHH
Q 015168          320 LGHMSYDIVGAQILQTGIPSSKANLIGTTEISVASLVESVML  361 (412)
Q Consensus       320 ~GLw~~dl~~~~l~Q~~vp~~~~G~v~g~~~sl~~~~~ll~~  361 (412)
                      ++.-.-=.+...+..++.|++||++..++..+-.+...++..
T Consensus       140 l~~g~~~pa~~~i~~~W~P~~Ers~~~ail~~g~q~g~v~~m  181 (466)
T KOG2532|consen  140 LGQGVLFPAIGSILAKWAPPNERSTFIAILTAGSQLGTIITM  181 (466)
T ss_pred             HHHhHHHhhhhceeeeECCHHHHHHHHHHHHHHHHHHHHHHH
Confidence            233223356778889999999999999999888876544444

>PF12832 MFS_1_like: MFS_1 like family

Probab=95.47  E-value=0.055  Score=41.80  Aligned_cols=51  Identities=29%  Similarity=0.390  Sum_probs=46.1

Q ss_pred             HHHHHHHhcCCCCchhHHHhhHHHHHHHHHHHHHHHHHHHhchhhHHHHHH
Q 015168          233 LMTAFLTQRGLNPSIIGGFSGLCASMGVAATFLSAYLVRRLGILKAGAAGL  283 (412)
Q Consensus       233 ~~~~y~~~~gls~~~~G~~~~~~avggllGt~l~~~l~~R~g~~r~~~~~~  283 (412)
                      -...|.+++|+|+.++|++.++.-...++++.+.+.+.+|.+..|......
T Consensus        22 fl~~~~~~~Gl~~~~iGil~~i~~~~~~~~~pl~g~laDk~~~~~~~l~~~   72 (77)
T PF12832_consen   22 FLPLYLKQLGLSPSQIGILSAIRPLIRFLAPPLWGFLADKFGKRKVILLGS   72 (77)
T ss_pred             hhhHhhhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCccHHHHHHH
Confidence            466788899999999999999999999999999999999999998876543

>PF03137 OATP: Organic Anion Transporter Polypeptide (OATP) family; InterPro: IPR004156 This family consists of several eukaryotic Organic-Anion-Transporting Polypeptides (OATPs)

Probab=95.43  E-value=0.004  Score=65.95  Aligned_cols=80  Identities=19%  Similarity=0.308  Sum_probs=0.0

Q ss_pred             hHHHHHHhHHHHhcCCcchHHHH-HHHHHHHhhhccchHHHHHHH-hcCCCCchhHHHhhHHHH-HHHHHHHHHHHHHHH
Q 015168          196 GIEAIKLGWKEYMQQPVLPASLA-YVLLCLNVVLTPGSLMTAFLT-QRGLNPSIIGGFSGLCAS-MGVAATFLSAYLVRR  272 (412)
Q Consensus       196 ~~~~~~~g~~~~~~~~v~~~~~~-~a~l~~t~v~~~~~~~~~y~~-~~gls~~~~G~~~~~~av-ggllGt~l~~~l~~R  272 (412)
                      ..++.....+.+++||+|.-... ...-++. +.++.+..+=|++ +.+++++.-.++.|...+ ++.+|.++.+.+.||
T Consensus       290 ~~~df~~~l~~Ll~Np~f~~~~la~~~~~~~-~~G~~tF~pKylE~QF~~sas~A~~l~G~v~ip~~~~G~llGG~ivkk  368 (539)
T PF03137_consen  290 SIKDFPKALKRLLTNPVFMCLILAGVFESFI-VSGFATFLPKYLESQFGLSASQASLLTGIVSIPGAALGILLGGYIVKK  368 (539)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             hhhhHHHHHHHHhcChHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHhCCCHHHHHHHHhhhhcchhheehheEEEEEEE
Confidence            45667778888999999998443 3333343 4677777888997 579999999999977766 677999999999999


Q ss_pred             hchh
Q 015168          273 LGIL  276 (412)
Q Consensus       273 ~g~~  276 (412)
                      ++..
T Consensus       369 ~kl~  372 (539)
T PF03137_consen  369 FKLS  372 (539)
T ss_dssp             ----
T ss_pred             ecCc
Confidence            9875

Several have been identified mostly in human and rat. Different OATPs vary in tissue distribution and substrate specificity. Since the numbering of different OATPs in particular species was based originally on the order of discovery, similarly numbered OATPs in humans and rats did not necessarily correspond in function, tissue distribution and substrate specificity (in spite of the name, some OATPs also transport organic cations and neutral molecules) so a scheme of using digits for rat OATPs and letters for human ones was introduced []. Prostaglandin transporter (PGT) proteins are also considered to be OATP family members. In addition, the methotrexate transporter OATK is closely related to OATPs. This family also includes several predicted proteins from Caenorhabditis elegans and Drosophila melanogaster. This similarity was not previously noted. Note: Members of this family are described (in the UniProtKB/Swiss-Prot database) as belonging to the SLC21 family of transporters.; GO: 0005215 transporter activity, 0006810 transport, 0016020 membrane; PDB: 3MRR_P.

>KOG0253 consensus Synaptic vesicle transporter SV2 (major facilitator superfamily) [General function prediction only]

Probab=95.37  E-value=3.6  Score=41.65  Aligned_cols=129  Identities=16%  Similarity=0.113  Sum_probs=81.5

Q ss_pred             HHHHHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHHhcCCCcCcchHHHHHHHHHHhhhhhhhhhhhhhHHhh
Q 015168          255 CASMGVAATFLSAYLVRRLGILKAGAAGLIFQASLLAMAVAVYWSGSLSQQNPLLFFLCLIVLSRLGHMSYDIVGAQILQ  334 (412)
Q Consensus       255 ~avggllGt~l~~~l~~R~g~~r~~~~~~~~~~~~l~~~v~~~~~g~~~~~~~~~l~~~g~~~sr~GLw~~dl~~~~l~Q  334 (412)
                      ....+.=|.+++..++.|+|+++++...+..-.+++.+.  ....++  .....++|.+-.+.|.    .|.  .....-
T Consensus       390 tslaefPGlLIt~~iverlGRKkTMal~l~~f~iflfll--~~c~~r--n~~tvllf~arafisg----~fq--vaYvYt  459 (528)
T KOG0253|consen  390 TSLAEFPGLLITGVIVERLGRKKTMALSLILFGIFLFLL--TTCKTR--NAYTVLLFTARAFISG----AFQ--VAYVYT  459 (528)
T ss_pred             HHHhhCCchhHHHHHHHHhcchhHHHHHHHHHHHHHHHH--HHhcCc--chhHHHHHHHHHHHhc----hhe--EEEEec
Confidence            455677888999999999999999886665332222221  111122  2233445543222222    111  222233


Q ss_pred             ccC-CcccchhHHHHHHHHHHHHHHHHHHHHHhccCCCchhHHHHHHHHHHHHHHHHHHHH
Q 015168          335 TGI-PSSKANLIGTTEISVASLVESVMLGVAIIANDVSHFGFLATLSLLSVVGAAWMFCHW  394 (412)
Q Consensus       335 ~~v-p~~~~G~v~g~~~sl~~~~~ll~~~~~~~~~~~~~f~~l~~~s~~~v~~~~~~~~~~  394 (412)
                      +.| |...|+..-|+-.+++...+++.+.+.+........++.+.- .++++++.+.-++|
T Consensus       460 PEVyPTavRatgvGtcSsmaRIggI~~p~iA~~~e~s~sl~i~vy~-~~~ilagIavcffP  519 (528)
T KOG0253|consen  460 PEVYPTAVRATGVGTCSSMARIGGIFSPVIAMRAELSTSLPIFVYG-ALFILAGIAVCFFP  519 (528)
T ss_pred             CcccchhhhhcchhhhhhHHhhhhhhhhHHHHHhccceeehHHHHH-HHHHHHHHHheeee
Confidence            344 778999999999999999999999888777777777776654 45566666666666

>PF01306 LacY_symp: LacY proton/sugar symporter; InterPro: IPR022814 In bacteria there are a number of families of transport proteins, including symporters and antiporters, that mediate the intake of a variety of sugars with the concomitant uptake of hydrogen ions (proton symporters) []

Probab=95.26  E-value=0.096  Score=53.50  Aligned_cols=68  Identities=21%  Similarity=0.166  Sum_probs=51.0

Q ss_pred             HHHHHHHHHHhhhccchHHHHHHHh-cCCCCchhHHHhhHHHHHHHHHHHHHHHHHHHhchhhHHHHHHH
Q 015168          216 SLAYVLLCLNVVLTPGSLMTAFLTQ-RGLNPSIIGGFSGLCASMGVAATFLSAYLVRRLGILKAGAAGLI  284 (412)
Q Consensus       216 ~~~~a~l~~t~v~~~~~~~~~y~~~-~gls~~~~G~~~~~~avggllGt~l~~~l~~R~g~~r~~~~~~~  284 (412)
                      +..+-..|++ -..+-+....|+++ .|+|++++|.+++.+++..++...+++.+..|+|.+|..++.+.
T Consensus        13 s~~~f~~Ff~-~gi~~pF~~iWL~~~~GLs~~~iG~i~s~~~~~~l~~qp~~G~i~Dklg~kK~Ll~~i~   81 (412)
T PF01306_consen   13 SLFYFFYFFI-WGIFLPFFPIWLTQVAGLSGTEIGIIFSAGSLFALLAQPVYGFISDKLGLKKHLLWFIA   81 (412)
T ss_dssp             HHHHHHHHHH-HHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHTHHHHHHHHHHCTTCSHHHHHHH
T ss_pred             HHHHHHHHHH-HHHHHHHHHHHHccccCCCHHHHHHHHHHHHHHHHHHHHhHHHhcchhhhhHHHHHHHH
Confidence            3334444444 24445567778875 89999999999999999999999999999999999998876654

The lacY family of Escherichia coli and Klebsiella pneumoniae are proton/beta-galactoside symporters, which, like most sugar transporters, are integral membrane proteins with 12 predicted transmembrane (TM) regions. Also similar to the lacY family are the rafinose (rafB) and sucrose (cscB) permeases from E. coli []. This entry also includes bacterial phenylproprionate permease.; PDB: 1PV7_B 1PV6_A 2Y5Y_B 2CFQ_A 2V8N_B 2CFP_A.

>PF01770 Folate_carrier: Reduced folate carrier; InterPro: IPR002666 The reduced folate carrier (a transmembrane glycoprotein) transports reduced folate into mammalian cells via the carrier mediated mechanism (as opposed to the receptor mediated mechanism) it also transports cytotoxic folate analogues used in chemotherapy [], such as methotrexate (MTX)

Probab=95.22  E-value=4.2  Score=41.59  Aligned_cols=234  Identities=12%  Similarity=0.018  Sum_probs=118.1

Q ss_pred             HHHHHhhhhhcchhccCCcHHHHHHHHHHHHHHHHHHHHHHHHHhccccccccchhHHHHHHHH--HHHHHHHHHhhhhh
Q 015168            7 LILIVGGPLVGKLMDHSPRIPAYICLNTVQAAAQLLSAAMIIHAHTVIPTSSSMLLHPWFFVLV--LAGAVERLTGVALG   84 (412)
Q Consensus         7 lp~ll~g~~~G~~vDr~~R~~v~~~~~~~q~~~v~~s~~~~~~~~~~~~~~~~~~~~~l~~~~~--~~g~~~~l~~~a~~   84 (412)
                      =+++.+-.++.-+-|..+-|++++..-+.+.+    .-.  +..++..      + ....+.=+  ..+.+..++..+  
T Consensus        52 YSyl~~l~~vflltd~l~Ykpviil~~~~~i~----t~~--lll~~~s------v-~~mq~~q~~yg~~~a~evay~s--  116 (412)
T PF01770_consen   52 YSYLAFLLPVFLLTDYLRYKPVIILQALSYII----TWL--LLLFGTS------V-LAMQLMQFFYGLATAAEVAYYS--  116 (412)
T ss_pred             HHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHH----HHH--HHHHHCc------H-HHHHHHHHHHHHHHHHHHHHHH--
Confidence            35666777888999999999997776443322    122  2222211      1 11222211  222222222222  


Q ss_pred             hhhcccceeeecCCCchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhcChhH--HHHHHHHHHHHHHHHHHHHHHHhhh
Q 015168           85 VAVERDWAVLLAGINRPIALAKANAVLNRIDLLCEIAGASLFGILLSKYEPVT--CLKFAAGLIMWSLPVMIILTWFTNK  162 (412)
Q Consensus        85 ~ai~RDwv~~l~~~~~~~~L~~~Ns~l~~id~v~~llgP~lgG~L~~~~~~~~--~~~~~~~~~~~s~~~~~~~l~~~~~  162 (412)
                            |+=..++++   +-.|+-+..|...++++++|-.+|-++++..+..-  ...+..+...+++...+       -
T Consensus       117 ------Yiys~v~~~---~yq~vts~~raa~l~g~~~s~~lgQllvs~~~~sy~~L~~isl~~~~~a~~~~~-------f  180 (412)
T PF01770_consen  117 ------YIYSVVDKE---HYQKVTSYTRAATLVGRFISSLLGQLLVSFGGVSYFQLNYISLASVSLALLIAL-------F  180 (412)
T ss_pred             ------HheeecCHH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHH-------H
Confidence                  333455543   89999999999999999999999999988554332  21221111112221111       1


Q ss_pred             ccccc--c--cccccc-----ccccCCCCC---------CCCCCchhhhHHhHHHHHHhHHHHhcCCcchH-----HHHH
Q 015168          163 ISSGV--L--DRAKCS-----QSCCRTSNE---------GPVPDADNIVDVGIEAIKLGWKEYMQQPVLPA-----SLAY  219 (412)
Q Consensus       163 ~~~~~--l--~~~~~~-----~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~g~~~~~~~~v~~~-----~~~~  219 (412)
                      +|.+.  .  +|.++.     +.+.++.++         .+.+..++...+..+.+.+.++..++||.++-     +++.
T Consensus       181 LP~~~~S~~f~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~y~~~~ll~WSlWWa~at  260 (412)
T PF01770_consen  181 LPMPKRSLFFHRKPPAEQDANESESDKMNESPESSSSTEKSPSTESSSRKSVLRLLWKDFKSCYSNPRLLLWSLWWAFAT  260 (412)
T ss_pred             cCCCCcccceeccCccccccccccccccccccccccccccCcccccchHHHHHHHHHHHHHHHhcCchHHHHHHHHHHHH
Confidence            22111  0  111100     000000000         00011111223456667778888889997766     3333


Q ss_pred             HHHHHHhhhccchHHHHHHH--hcCCCCchhHHHhhHHHHHHHHHHHHHHHHHHHhch
Q 015168          220 VLLCLNVVLTPGSLMTAFLT--QRGLNPSIIGGFSGLCASMGVAATFLSAYLVRRLGI  275 (412)
Q Consensus       220 a~l~~t~v~~~~~~~~~y~~--~~gls~~~~G~~~~~~avggllGt~l~~~l~~R~g~  275 (412)
                      +.-+.  +..+  ....+-+  ..+-....-|.+-++..+.|-++++..+.+..+...
T Consensus       261 cgy~q--v~nY--vQ~LW~~v~~~~~~~vYNG~VeA~~tllgA~~al~~g~v~~~w~~  314 (412)
T PF01770_consen  261 CGYYQ--VINY--VQSLWDTVPPSDNESVYNGAVEAASTLLGAIAALLAGYVKVNWDR  314 (412)
T ss_pred             hHHHH--HHHH--HHHHHHhcCCCCCCcccchHHHHHHHHHHHHHHHHHhHhhcchHH
Confidence            33332  1111  1222211  134455666777888888888888888888555444

Mammalian cells have an absolute requirement for exogenous folates which are needed for growth, and biosynthesis of macromolecules [].; GO: 0005542 folic acid binding, 0008518 reduced folate carrier activity, 0006810 transport, 0016020 membrane

>TIGR00769 AAA ADP/ATP carrier protein family

Probab=95.16  E-value=4.9  Score=41.98  Aligned_cols=171  Identities=14%  Similarity=0.117  Sum_probs=86.5

Q ss_pred             ecCCCchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhh-------cC-hhHHH-HHHHHHHHHHHHHHHHHHHHhhhccc
Q 015168           95 LAGINRPIALAKANAVLNRIDLLCEIAGASLFGILLSK-------YE-PVTCL-KFAAGLIMWSLPVMIILTWFTNKISS  165 (412)
Q Consensus        95 l~~~~~~~~L~~~Ns~l~~id~v~~llgP~lgG~L~~~-------~~-~~~~~-~~~~~~~~~s~~~~~~~l~~~~~~~~  165 (412)
                      ++..+   |..|.-..+.....++.++||.+...+...       .+ |...+ .......+... +...+.+...|.. 
T Consensus       157 i~t~~---qakRfy~l~~~ganlg~i~sg~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~~~~-~~~~~~~~l~~~~-  231 (472)
T TIGR00769       157 ITTID---EAKRFYALFGLGANVALIFSGRTIKYFSKLRASLGPGVDGWHVSLKNLMVIVICSGL-AIILLYWWVNRNV-  231 (472)
T ss_pred             cCCHH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccccChHHHHHHHHHHHHHHHHH-HHHHHHHHHHhcc-
Confidence            66643   899999999999999999999998888732       11 21111 11111111111 1111112222211 


Q ss_pred             cccccccccccccCCCCCCCCCCchhhhHHhHHHHHHhHHHHhcCCcchHHHHHHHHHHHhhhccchHHHHHHHhcCCCC
Q 015168          166 GVLDRAKCSQSCCRTSNEGPVPDADNIVDVGIEAIKLGWKEYMQQPVLPASLAYVLLCLNVVLTPGSLMTAFLTQRGLNP  245 (412)
Q Consensus       166 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~v~~~~~~~a~l~~t~v~~~~~~~~~y~~~~gls~  245 (412)
                        .++++..+++.++ + ++         +......||++..+|+|-++....+..+|-.+....+..--..++++.-++
T Consensus       232 --~~~~~~~~~~~~~-~-k~---------k~k~~~~es~k~i~~S~yL~~ia~~vi~y~~~~nlve~~~k~~v~~~~p~~  298 (472)
T TIGR00769       232 --LTDPRSYNPALKE-K-KV---------KPKMSTMESLKFLVSSPYILDLALLVIAYGISINLVEVTWKSKLKAQYPSP  298 (472)
T ss_pred             --cCCccccchhhcc-c-cC---------CCCCCHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCH
Confidence              1111100000000 0 00         012246789999999999999888877782211212222222334444455


Q ss_pred             chhHHHh----hHHHHHHHHHHHHHHHHHHHhchhhHHHHHH
Q 015168          246 SIIGGFS----GLCASMGVAATFLSAYLVRRLGILKAGAAGL  283 (412)
Q Consensus       246 ~~~G~~~----~~~avggllGt~l~~~l~~R~g~~r~~~~~~  283 (412)
                      ..+.-++    ...++..+.--++.+++.||+|-..+..+.-
T Consensus       299 ~~~~~f~g~~~~~~gi~tl~~~l~~~~l~~~~Gw~~~a~i~P  340 (472)
T TIGR00769       299 NEYSAFMGDFSTWTGVVSVTMMLLSGNVIRKYGWLTAALITP  340 (472)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHH
Confidence            4444444    3333333344445599999999876655443

These proteins are members of the ATP:ADP Antiporter (AAA) Family (TC 2.A.12), which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.

>COG2223 NarK Nitrate/nitrite transporter [Inorganic ion transport and metabolism]

Probab=94.90  E-value=0.4  Score=48.71  Aligned_cols=115  Identities=17%  Similarity=0.082  Sum_probs=74.2

Q ss_pred             HHhcCCCCchhHHHhhHHHHHHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHHhc-CCCcCcchHHHHHHHHH
Q 015168          238 LTQRGLNPSIIGGFSGLCASMGVAATFLSAYLVRRLGILKAGAAGLIFQASLLAMAVAVYWS-GSLSQQNPLLFFLCLIV  316 (412)
Q Consensus       238 ~~~~gls~~~~G~~~~~~avggllGt~l~~~l~~R~g~~r~~~~~~~~~~~~l~~~v~~~~~-g~~~~~~~~~l~~~g~~  316 (412)
                      -++.|+|+.+.+++-+...+.|-+-=+.++.+..|+|-+++...+..   +.++++....+. ..++ . ..++. .|..
T Consensus        41 ~~~~~LS~~q~~ll~aiPil~GallRl~~g~l~drfGgR~~~~~s~~---l~~IP~~~~~~a~~~~~-~-~~ll~-~gll  114 (417)
T COG2223          41 KSDFGLSEGQKGLLVAIPILVGALLRLPYGFLTDRFGGRKWTILSML---LLLIPCLGLAFAVTYPS-T-WQLLV-IGLL  114 (417)
T ss_pred             ccccCCCHHHHHHHHHHHHHHhHHHHHHHHhhhcccCchHHHHHHHH---HHHHHHHHHHHHccCCc-h-HHHHH-HHHH
Confidence            35699999999999999999999999999999999999988775543   444555443332 2211 1 12222 2333


Q ss_pred             HhhhhhhhhhhhhhHHhhccCCcccchhHHHHHHHHHHHHHHHH
Q 015168          317 LSRLGHMSYDIVGAQILQTGIPSSKANLIGTTEISVASLVESVM  360 (412)
Q Consensus       317 ~sr~GLw~~dl~~~~l~Q~~vp~~~~G~v~g~~~sl~~~~~ll~  360 (412)
                      + +++=-+|.+.+. ..-+.-|++++|.++|+++.=|.+..+..
T Consensus       115 ~-G~~GasFav~m~-~~s~~fP~~~qG~AlGI~g~GN~G~av~q  156 (417)
T COG2223         115 L-GLAGASFAVGMP-NASFFFPKEKQGLALGIAGAGNLGVAVAQ  156 (417)
T ss_pred             H-hcccceehcccc-cccccCChhhhhHHHHHhccccccHHHHH
Confidence            2 112213433332 23455699999999999995454444333

>PF06779 DUF1228: Protein of unknown function (DUF1228); InterPro: IPR010645 This entry represents the N terminus of several putative bacterial membrane proteins, which may be sugar transporters

Probab=94.70  E-value=0.14  Score=40.45  Aligned_cols=54  Identities=20%  Similarity=0.186  Sum_probs=46.1

Q ss_pred             hHHHHHHHhcCCCCchhHHHhhHHHHHHHHHHHHHHHHHHHhchhhHHHHHHHH
Q 015168          232 SLMTAFLTQRGLNPSIIGGFSGLCASMGVAATFLSAYLVRRLGILKAGAAGLIF  285 (412)
Q Consensus       232 ~~~~~y~~~~gls~~~~G~~~~~~avggllGt~l~~~l~~R~g~~r~~~~~~~~  285 (412)
                      .+.+.-.++.++|+++-|++-+.|-+|.++|++...++.+|.+.++....+++.
T Consensus        13 plLP~M~~~~~ls~~~ag~lasaNy~GYL~GAl~~~~~~~~~~~~~~~~~~l~~   66 (85)
T PF06779_consen   13 PLLPLMQADGGLSLSQAGWLASANYLGYLVGALLASRLPRHSRPRRLLRAGLLL   66 (85)
T ss_pred             hHhHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHH
Confidence            345566678999999999999999999999999999999988777777767654

Note that many members are hypothetical proteins.

>COG2807 CynX Cyanate permease [Inorganic ion transport and metabolism]

Probab=94.57  E-value=1.6  Score=43.80  Aligned_cols=141  Identities=13%  Similarity=0.123  Sum_probs=92.0

Q ss_pred             hcCCCCchhHHHhhHHHHHHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHHhcCCCcCcchHHHHHHHHHHhh
Q 015168          240 QRGLNPSIIGGFSGLCASMGVAATFLSAYLVRRLGILKAGAAGLIFQASLLAMAVAVYWSGSLSQQNPLLFFLCLIVLSR  319 (412)
Q Consensus       240 ~~gls~~~~G~~~~~~avggllGt~l~~~l~~R~g~~r~~~~~~~~~~~~l~~~v~~~~~g~~~~~~~~~l~~~g~~~sr  319 (412)
                      +.|+|.+..|++-++--+..=+.+...|++.||+|..|....++..      +++....-..    .....+..|-.+.+
T Consensus        41 ~~gls~s~aGlLTtLPll~fg~~ap~a~~Lar~~g~er~l~~~Lll------i~~G~~iR~~----~~~~~L~~gt~l~G  110 (395)
T COG2807          41 DLGLSFSVAGLLTTLPLLAFGLFAPAAPRLARRFGEERSLFLALLL------IAAGILIRSL----GGLPLLFLGTLLAG  110 (395)
T ss_pred             HhcccHHHHHHHHHHHHHHHHHHHhhhHHHHHHHhhHHHHHHHHHH------HHHHHHHHhc----ccHHHHHHHHHHHH
Confidence            5899999999999999999999999999999999999998876542      1111211111    11222223544555


Q ss_pred             hhhhhhhhhhhHHhhccCCcccchhHHHHHHHHHHHHHHHHHHHHHhccCCCchhHHHHHHHHHHHHHHHHHH
Q 015168          320 LGHMSYDIVGAQILQTGIPSSKANLIGTTEISVASLVESVMLGVAIIANDVSHFGFLATLSLLSVVGAAWMFC  392 (412)
Q Consensus       320 ~GLw~~dl~~~~l~Q~~vp~~~~G~v~g~~~sl~~~~~ll~~~~~~~~~~~~~f~~l~~~s~~~v~~~~~~~~  392 (412)
                      .|.-+-|+-.-.+.++. .|++.|.++|++..--.....+...+..-..+.. +++=..+...++.+...+..
T Consensus       111 ~gIav~nVLLPslIK~~-Fpk~~~~mtglYs~sl~~~aaLaa~lavpla~~~-~gW~~aL~~WAl~allAl~~  181 (395)
T COG2807         111 AGIAVINVLLPSLIKRD-FPKRVGLMTGLYSTSLGAGAALAAALAVPLAQHS-GGWRGALGFWALLALLALLI  181 (395)
T ss_pred             hhHHHHHHhhhHHHHhh-cccchhhHHhHHHHHHHHHHHHHhhhhhHHHHhh-ccHHHHHHHHHHHHHHHHHH
Confidence            56555777777777765 5677889999987766665544444433333333 55666666666665555544

>PF11700 ATG22: Vacuole effluxer Atg22 like; InterPro: IPR024671 Autophagy is a major survival mechanism in which eukaryotes recycle cellular nutrients during stress conditions

Probab=94.48  E-value=0.62  Score=48.69  Aligned_cols=136  Identities=15%  Similarity=0.107  Sum_probs=83.0

Q ss_pred             chhhHHHHHHhhhhhcchhccCCcH--HHHHHHHHHHHHHHHHHHHHHHHHhcccccccc-chhHHHHHHHHHHHHHHHH
Q 015168            2 GFFSKLILIVGGPLVGKLMDHSPRI--PAYICLNTVQAAAQLLSAAMIIHAHTVIPTSSS-MLLHPWFFVLVLAGAVERL   78 (412)
Q Consensus         2 g~~~~lp~ll~g~~~G~~vDr~~R~--~v~~~~~~~q~~~v~~s~~~~~~~~~~~~~~~~-~~~~~l~~~~~~~g~~~~l   78 (412)
                      ++..++.-++.+...|.+-||++-|  +++..+.+.-.+.    +  +...++..+...+ ...+..++..++.|...  
T Consensus       323 ~l~~~i~a~~Ga~~~g~l~~r~g~k~~~~l~~~l~~~~~i----~--~~g~~G~~~~~~g~~~~~~f~~~a~~~G~~~--  394 (477)
T PF11700_consen  323 GLVVQIVAIIGALLFGWLQDRFGPKTKRTLLISLILWIII----P--LYGLFGFWPSFFGLKSPWEFWVLAVLIGLFM--  394 (477)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhCCchhHHHHHHHHHHHHH----H--HHHHHHhhhcccCcccHHHHHHHHHHHHHHh--
Confidence            4556677777788888888888766  6655554322111    1  1111210000000 01123334444444443  


Q ss_pred             HhhhhhhhhcccceeeecCCCchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhcC-hhHHHHHHHHHHHHHHH
Q 015168           79 TGVALGVAVERDWAVLLAGINRPIALAKANAVLNRIDLLCEIAGASLFGILLSKYE-PVTCLKFAAGLIMWSLP  151 (412)
Q Consensus        79 ~~~a~~~ai~RDwv~~l~~~~~~~~L~~~Ns~l~~id~v~~llgP~lgG~L~~~~~-~~~~~~~~~~~~~~s~~  151 (412)
                         +...+..|.....+.+++   +.++.-+.....+..+-++||++.|.+.+..| -|.++.++....++.++
T Consensus       395 ---G~~qs~sRs~~~~LiP~g---~e~efFgly~i~gk~ss~lGPll~g~i~~~tg~~r~g~~~l~~lf~~gl~  462 (477)
T PF11700_consen  395 ---GGIQSASRSLFSRLIPPG---REAEFFGLYAITGKASSWLGPLLFGLITDATGSQRYGFLFLLVLFLIGLI  462 (477)
T ss_pred             ---hhHHHHHHHHHHHhCCCc---hhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchhHHHHHHHHHHHHHH
Confidence               333444555555587864   67999999999999999999999999999887 77777776666666653

Atg22, Avt3 and Avt4 are partially redundant vacuolar effluxers, which mediate the efflux of leucine and other amino acids resulting from autophagy []. This family also includes other transporter proteins.

>KOG1330 consensus Sugar transporter/spinster transmembrane protein [Carbohydrate transport and metabolism]

Probab=94.29  E-value=0.054  Score=55.54  Aligned_cols=121  Identities=14%  Similarity=0.107  Sum_probs=89.7

Q ss_pred             hcCCCCchhHHHhhHHHHHHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHHhcCCCcCcchHHHHHHHHHHhh
Q 015168          240 QRGLNPSIIGGFSGLCASMGVAATFLSAYLVRRLGILKAGAAGLIFQASLLAMAVAVYWSGSLSQQNPLLFFLCLIVLSR  319 (412)
Q Consensus       240 ~~gls~~~~G~~~~~~avggllGt~l~~~l~~R~g~~r~~~~~~~~~~~~l~~~v~~~~~g~~~~~~~~~l~~~g~~~sr  319 (412)
                      ..+++++..|++-..-.+..++++-+++.|.+|+++.+.+.++..+..++...+-..         .-.+.++..=..-+
T Consensus        62 ~fni~~s~~Gll~~vf~v~~~i~sPl~gyLadryNR~~v~~vG~~iW~~Av~~~~fs---------~~Fwq~~l~R~~vG  132 (493)
T KOG1330|consen   62 YFNISDSELGLLQTVFIVVFMIASPLFGYLADRYNRKRVIAVGIFIWTLAVFASGFS---------NHFWQVLLCRGFVG  132 (493)
T ss_pred             hcCCCchhccchhHHHHHHHHHHHHHHHHHHhhcCcceEEeeHHHHHHHHHHHHHHH---------HHHHHHHHHHHHhc
Confidence            479999999999999999999999999999999999998877766544433332111         01122222223346


Q ss_pred             hhhhhhhhhhhHHhhccCCcccchhHHHHHHHHHHHHHHHHHHHHHhccC
Q 015168          320 LGHMSYDIVGAQILQTGIPSSKANLIGTTEISVASLVESVMLGVAIIAND  369 (412)
Q Consensus       320 ~GLw~~dl~~~~l~Q~~vp~~~~G~v~g~~~sl~~~~~ll~~~~~~~~~~  369 (412)
                      +|.-++....+.++-...|++.|+++.++.+..-..-..+.++.+.....
T Consensus       133 iGeAs~~~ia~s~IaD~f~~~~Rs~~~~ify~~ipvGsglG~vvgs~va~  182 (493)
T KOG1330|consen  133 IGEASYSPIAPSLIADSFPDDKRSRVLGIFYFAIPVGSGLGYVVGSVVAS  182 (493)
T ss_pred             cchhhhcccchhHhhhcCcchhhhHHHHHhhhhcccccceeEEeeeeecc
Confidence            68888999999999999999999999999888777655556655544433

>KOG0255 consensus Synaptic vesicle transporter SVOP and related transporters (major facilitator superfamily) [General function prediction only]

Probab=93.94  E-value=1.1  Score=46.90  Aligned_cols=120  Identities=11%  Similarity=-0.039  Sum_probs=83.0

Q ss_pred             hcCCCCchhHHHhhHHHHHHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHHhcCCCcCcchHHHHHHHHHHhh
Q 015168          240 QRGLNPSIIGGFSGLCASMGVAATFLSAYLVRRLGILKAGAAGLIFQASLLAMAVAVYWSGSLSQQNPLLFFLCLIVLSR  319 (412)
Q Consensus       240 ~~gls~~~~G~~~~~~avggllGt~l~~~l~~R~g~~r~~~~~~~~~~~~l~~~v~~~~~g~~~~~~~~~l~~~g~~~sr  319 (412)
                      ..+.+.....+..++--+|.++|+++.+.+..|+|++++..++...+.++....  .+.+ +.. ...+.=|+.|+..+.
T Consensus       112 ~~c~~~~~~~~~~s~~~~G~~vG~~i~g~lsD~~GRk~~~~~~~~~~~i~~~~~--a~a~-~~~-~~~~~Rfl~G~~~~~  187 (521)
T KOG0255|consen  112 LVCDSSTLVALGQSLFFLGVLVGSLIFGPLSDRFGRKPVLLVSLLLFIIFGILT--AFAP-NYW-MFLIFRFLSGFFGSG  187 (521)
T ss_pred             eeeCcHhHHHHHHHHHHHHHHHHHhhheehHhhcccHHHHHHHHHHHHHHHHHH--HHhC-cHH-HHHHHHHHHHhhccc
Confidence            357788888888899999999999999999999999999999988776665332  2222 100 011122233333322


Q ss_pred             hhhhhhhhhhhHHhhccCCcccchhHHHHHHHHHHHHHHHHHHHHHhccC
Q 015168          320 LGHMSYDIVGAQILQTGIPSSKANLIGTTEISVASLVESVMLGVAIIAND  369 (412)
Q Consensus       320 ~GLw~~dl~~~~l~Q~~vp~~~~G~v~g~~~sl~~~~~ll~~~~~~~~~~  369 (412)
                           .......+.-|.++++.|+.+... ....+..+.....++..+-+
T Consensus       188 -----~~~~~~~~~~E~~~~~~R~~~~~~-~~~~~~~~~~~~~~~a~~~~  231 (521)
T KOG0255|consen  188 -----PLTVGFGLVAEIVSPKQRGLALTL-GGFFFVGGLMLPAGAAYITR  231 (521)
T ss_pred             -----hhHHhHhhheeecCcchhhHHHHH-HHHHHHHHHHHHHHHHHHHh
Confidence                 224455566799999999999999 77787777777666655544

>PRK11462 putative transporter; Provisional

Probab=93.87  E-value=2.5  Score=43.78  Aligned_cols=120  Identities=13%  Similarity=0.074  Sum_probs=71.9

Q ss_pred             HHHHHHhcCCCCchhHHHhhHHHHHHHHHHHHHHHHHH----HhchhhHH-HHHHHHHHHHHHHHHHHHhcCCCcCcc-h
Q 015168          234 MTAFLTQRGLNPSIIGGFSGLCASMGVAATFLSAYLVR----RLGILKAG-AAGLIFQASLLAMAVAVYWSGSLSQQN-P  307 (412)
Q Consensus       234 ~~~y~~~~gls~~~~G~~~~~~avggllGt~l~~~l~~----R~g~~r~~-~~~~~~~~~~l~~~v~~~~~g~~~~~~-~  307 (412)
                      ++-|.+..|+|+...|.++.+.-+--..---+.+.+..    |+|++|-- .++.+   .+.+.++..+.++..+... .
T Consensus        33 ~~fyt~~~Gl~~~~~g~i~~~~ri~Dai~Dp~~G~~~D~t~~r~Gr~rp~il~g~i---~~~i~~~llf~~p~~s~~~~~  109 (460)
T PRK11462         33 MFFYTDIFGIPAGFVGTMFLVARALDAISDPCMGLLADRTRSRWGKFRPWVLFGAL---PFGIVCVLAYSTPDLSMNGKM  109 (460)
T ss_pred             HHHHHHhhCCCHHHHHHHHHHHHHHHHHHhhhheehhccCCCCCCCcchhHhHHHH---HHHHHHHHHHhCCCCCcchHH
Confidence            44445568999999999998877766666666666655    56776543 33322   2222222233222112112 1


Q ss_pred             HHHHHHHHHHhhhhhhhhhhhhhHHhhccCC-cccchhHHHHHHHHHHHHH
Q 015168          308 LLFFLCLIVLSRLGHMSYDIVGAQILQTGIP-SSKANLIGTTEISVASLVE  357 (412)
Q Consensus       308 ~~l~~~g~~~sr~GLw~~dl~~~~l~Q~~vp-~~~~G~v~g~~~sl~~~~~  357 (412)
                      ++++. ...+-.++.-.+|+....+.-|.++ ++||.+.++......+...
T Consensus       110 ~y~~~-~~~~~~~~~t~~~ipy~al~~~lt~d~~eRt~l~s~r~~~~~iG~  159 (460)
T PRK11462        110 IYAAI-TYTLLTLLYTVVNIPYCALGGVITNDPTQRISLQSWRFVLATAGG  159 (460)
T ss_pred             HHHHH-HHHHHHHHHHHHhccHHHHHHHhcCCHHHHHHHHHHHHHHHHHHH
Confidence            22222 2223355666788888888777775 7999999998887777543

>PRK09848 glucuronide transporter; Provisional

Probab=93.85  E-value=1.8  Score=44.32  Aligned_cols=112  Identities=14%  Similarity=0.170  Sum_probs=62.8

Q ss_pred             HHHH-hcCCCCchhHHHhhHHHHHHHHHHHHHHHHHHHh----chhhHH-HHHHHHHHHHHHHHHHHHhcC-CCcCcch-
Q 015168          236 AFLT-QRGLNPSIIGGFSGLCASMGVAATFLSAYLVRRL----GILKAG-AAGLIFQASLLAMAVAVYWSG-SLSQQNP-  307 (412)
Q Consensus       236 ~y~~-~~gls~~~~G~~~~~~avggllGt~l~~~l~~R~----g~~r~~-~~~~~~~~~~l~~~v~~~~~g-~~~~~~~-  307 (412)
                      .|.+ ..|+|+.+.|.+.....+.......+.+++..|.    |++|-. .++...   +.......+... ..+.... 
T Consensus        33 ~y~~~~~gl~~~~~g~~~~~~~~~~~~~~~~~G~l~Dr~~~~~Gr~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~  109 (448)
T PRK09848         33 SYYTDVAGVGAAAAGTMLLLVRVFDAFADVFAGRVVDSVNTRWGKFRPFLLFGTAP---LMIFSVLVFWVPTDWSHSSKV  109 (448)
T ss_pred             HHHHHHcCCCHHHHHHHHHHHHHHHHHhhhhheeeeecCCCCCcCchHHHHHHHHH---HHHHHHHHHhCcCCCCcchHH
Confidence            4665 4799999999999999999999999999998886    555432 333321   111222222221 1111111 


Q ss_pred             HHHHHHHHHHhhhhhhhhhhhhhHHhhccC-CcccchhHHHHHHH
Q 015168          308 LLFFLCLIVLSRLGHMSYDIVGAQILQTGI-PSSKANLIGTTEIS  351 (412)
Q Consensus       308 ~~l~~~g~~~sr~GLw~~dl~~~~l~Q~~v-p~~~~G~v~g~~~s  351 (412)
                      .+.+ .......++.-.++.....+.-+.+ ++++|.+.++....
T Consensus       110 ~~~~-~~~~~~~~~~~~~~~~~~al~~~~~~~~~~r~~~~~~r~~  153 (448)
T PRK09848        110 VYAY-LTYMGLGLCYSLVNIPYGSLATAMTQQPQSRARLGAARGI  153 (448)
T ss_pred             HHHH-HHHHHHHHHHHHhcccHhhhhhhhcCCHHHHHHHHHHHHH
Confidence            1111 1111223233335555555544444 55788888776653

>KOG4686 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]

Probab=93.18  E-value=4.6  Score=39.52  Aligned_cols=148  Identities=14%  Similarity=0.108  Sum_probs=80.7

Q ss_pred             CcchHHHHHHHHH-HHhhhccchHHHHHHH-hcCCCCchhHHHhhHHHHHHHHHHHHHHHHHHHhchhhHHHHHHHHHHH
Q 015168          211 PVLPASLAYVLLC-LNVVLTPGSLMTAFLT-QRGLNPSIIGGFSGLCASMGVAATFLSAYLVRRLGILKAGAAGLIFQAS  288 (412)
Q Consensus       211 ~v~~~~~~~a~l~-~t~v~~~~~~~~~y~~-~~gls~~~~G~~~~~~avggllGt~l~~~l~~R~g~~r~~~~~~~~~~~  288 (412)
                      |-|+-.+.++.+| .. ...|=++-..+.. ..|+|+..-|-+.+..-.-...-+-+++.+..++|.. ..++. ..-..
T Consensus       264 ppfw~~~iicv~yyva-~fPFi~lg~~fF~~rfGlS~~~a~~i~s~vy~Isav~spvfg~i~Dk~G~n-~~wv~-~a~~~  340 (459)
T KOG4686|consen  264 PPFWVLVIICVLYYVA-WFPFITLGPMFFQKRFGLSAVSAGNILSTVYGISAVLSPVFGAISDKYGFN-LWWVA-SACIL  340 (459)
T ss_pred             ccHHHHHHHHHHHHHH-HHHHhhhhHHHHHHhhCCChhhccchhhhhhhhhhhhhhhHHHhHhhhcce-ehhHH-HHHHH
Confidence            6666677777777 33 4555555566654 5899998777665544444444456677888999873 22222 11111


Q ss_pred             HHHHHHHHHhcCCCcCcchHHHHHHHHHHhhhhhhhhhhhhh---HHhhccCCcccchhHHHHHHHHHHHHHHHHHHHHH
Q 015168          289 LLAMAVAVYWSGSLSQQNPLLFFLCLIVLSRLGHMSYDIVGA---QILQTGIPSSKANLIGTTEISVASLVESVMLGVAI  365 (412)
Q Consensus       289 ~l~~~v~~~~~g~~~~~~~~~l~~~g~~~sr~GLw~~dl~~~---~l~Q~~vp~~~~G~v~g~~~sl~~~~~ll~~~~~~  365 (412)
                      .+..-...++. -.++..++.+.         || ++++-.-   -..--.|||+..|++.|...++|++--....++..
T Consensus       341 tl~~H~~l~Ft-~lsPy~~m~~l---------GL-sysllAcslWP~va~~vpE~qLGTaygf~qsIqNLgla~i~Iiag  409 (459)
T KOG4686|consen  341 TLLGHSGLFFT-FLSPYTSMTFL---------GL-SYSLLACSLWPCVASLVPEEQLGTAYGFIQSIQNLGLAFIPIIAG  409 (459)
T ss_pred             HHHHhhhHHhh-hccHHHHHHHH---------hh-hHHHHHHHHhhhhhhhCCHHHhcchHHHHHHHHhhhhhHHhhhhh
Confidence            11111111111 01122333332         33 3333222   23445679999999999999999985444555544


Q ss_pred             hccCCCc
Q 015168          366 IANDVSH  372 (412)
Q Consensus       366 ~~~~~~~  372 (412)
                      ...|.+.
T Consensus       410 ~i~d~~g  416 (459)
T KOG4686|consen  410 FIADGDG  416 (459)
T ss_pred             eeecCCC
Confidence            4444433

>PF03825 Nuc_H_symport: Nucleoside H+ symporter

Probab=93.01  E-value=6.1  Score=40.28  Aligned_cols=49  Identities=16%  Similarity=0.214  Sum_probs=42.6

Q ss_pred             cchHHHHHHHhcCCCCchhHHHhhHHHHHHHHHHHHHHHHHHHhchhhH
Q 015168          230 PGSLMTAFLTQRGLNPSIIGGFSGLCASMGVAATFLSAYLVRRLGILKA  278 (412)
Q Consensus       230 ~~~~~~~y~~~~gls~~~~G~~~~~~avggllGt~l~~~l~~R~g~~r~  278 (412)
                      +-+...+|+++.|+|+.++|.+.+.+.+..+++..+.+.+.+|.+..+.
T Consensus        21 ~~p~~~~~L~~~G~s~~qIG~l~a~~~~~~i~~~~~~g~~aDr~~~~~~   69 (400)
T PF03825_consen   21 FLPYLPLYLESRGFSGTQIGILLAVGPLARIVSPPFWGAIADRFGSAKR   69 (400)
T ss_pred             HHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhHhhhHHH
Confidence            3445778999999999999999999999999999999999999875443

>KOG2325 consensus Predicted transporter/transmembrane protein [General function prediction only]

Probab=92.96  E-value=2.2  Score=44.56  Aligned_cols=74  Identities=7%  Similarity=-0.114  Sum_probs=46.8

Q ss_pred             hhhhhhhhhhhhHHhhccCCcccchhHHHHHHHHHHHHHHHHHHHHHhccCCCchhHHHHHHHHHHHHHHHHHH
Q 015168          319 RLGHMSYDIVGAQILQTGIPSSKANLIGTTEISVASLVESVMLGVAIIANDVSHFGFLATLSLLSVVGAAWMFC  392 (412)
Q Consensus       319 r~GLw~~dl~~~~l~Q~~vp~~~~G~v~g~~~sl~~~~~ll~~~~~~~~~~~~~f~~l~~~s~~~v~~~~~~~~  392 (412)
                      +.++=..+.....+..+...|+.+|.+.++...-+.......+........-.-....+.+..+.++....+..
T Consensus       399 g~~~P~~~~~~~tlySkiLgp~~q~~~qg~~~~~~s~~~~~~~~~~t~~~~~~g~~~v~~~~~~~~l~~~~l~~  472 (488)
T KOG2325|consen  399 GIAFPFISTALDTLYSKILGPRDQGTMQGVFSISGSIARVVGPIFSTAIFTLSGPRPVWIILLCLLLVVAALWI  472 (488)
T ss_pred             ccccccccchHHHHHHHHhCCccccceeEEEEeccchhhhhhHHHHhhhHHhcCccHHHHHHHHHHHHHHHHHH
Confidence            33443456677888888889999999999888888877766655544443333444555555554444444333

>PF13347 MFS_2: MFS/sugar transport protein

Probab=92.55  E-value=0.3  Score=49.78  Aligned_cols=122  Identities=15%  Similarity=0.170  Sum_probs=72.4

Q ss_pred             HHHHHHhcCCCCchhHHHhhHHHHHHHHHHHHHHHHHH----HhchhhHH-HHHHHHHHHHHHHHHHHHhcCC--CcCcc
Q 015168          234 MTAFLTQRGLNPSIIGGFSGLCASMGVAATFLSAYLVR----RLGILKAG-AAGLIFQASLLAMAVAVYWSGS--LSQQN  306 (412)
Q Consensus       234 ~~~y~~~~gls~~~~G~~~~~~avggllGt~l~~~l~~----R~g~~r~~-~~~~~~~~~~l~~~v~~~~~g~--~~~~~  306 (412)
                      ++-|.+..|+++...|++...+-+-...-..+.+.+..    |.|++|-- +++...   +.+..+..+.+.+  .+...
T Consensus        25 ~~f~~~~~gl~~~~~g~i~~~~~i~dai~dp~~G~~sDr~~tr~Grrrp~~l~g~i~---~~~~~~llf~~~p~~~~~~~  101 (428)
T PF13347_consen   25 LYFYTDVLGLSPALAGLILLVGRIWDAITDPLIGYLSDRTRTRWGRRRPWILIGAIL---LALSFFLLFSPPPAGLSFTA  101 (428)
T ss_pred             HHHHHHHcCCCHHHHHHHHHHHHHhhhhcCCcEEEEEeeecccccccceEeehhhHH---HHHHHHHhhccccchhhhhh
Confidence            33444568999999999998777666655556665555    88877643 333322   2222222222211  11112


Q ss_pred             hHHHHHHHHHHhhhhhhhhhhhhhHHhhccCC-cccchhHHHHHHHHHHHHHH
Q 015168          307 PLLFFLCLIVLSRLGHMSYDIVGAQILQTGIP-SSKANLIGTTEISVASLVES  358 (412)
Q Consensus       307 ~~~l~~~g~~~sr~GLw~~dl~~~~l~Q~~vp-~~~~G~v~g~~~sl~~~~~l  358 (412)
                      ....+....++..++.-.+++....+.-+.++ +++|.+.++..........+
T Consensus       102 ~~~~~~~~~~l~~~~~t~~~i~~~al~~~lt~~~~~R~~l~~~~~~~~~~g~~  154 (428)
T PF13347_consen  102 KLVWLFVFYILFDIAYTFVQIPYNALIPELTPDPDERTRLSSWRMIFSMIGSL  154 (428)
T ss_pred             HHHHHHHHHHHHHHhhhhccCchhhcCccccccHhhhhhHHHHHHHHHHHHHH
Confidence            22222223333355666677888888888886 47999999999888776553

>KOG3762 consensus Predicted transporter [General function prediction only]

Probab=92.54  E-value=4.1  Score=43.05  Aligned_cols=139  Identities=13%  Similarity=0.043  Sum_probs=92.6

Q ss_pred             HHHHHHhcCCCCchhHHHhhHHHHHHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHHhcCCCcCcchHHHHHH
Q 015168          234 MTAFLTQRGLNPSIIGGFSGLCASMGVAATFLSAYLVRRLGILKAGAAGLIFQASLLAMAVAVYWSGSLSQQNPLLFFLC  313 (412)
Q Consensus       234 ~~~y~~~~gls~~~~G~~~~~~avggllGt~l~~~l~~R~g~~r~~~~~~~~~~~~l~~~v~~~~~g~~~~~~~~~l~~~  313 (412)
                      ++-+++++|-.+..+|..-..+=+|.+.-=+...++.+++|..|.+..++....  .=.....+.-.++. ..|+=+ +-
T Consensus       394 LfWHled~~~~~~LfGv~~a~~~~gEI~~~ffs~klI~kiGHv~v~~lgLa~~~--~Rf~~~S~L~n~W~-vLPiei-lq  469 (618)
T KOG3762|consen  394 LFWHLEDLGGIKTLFGVVSALCHAGEILFYFFSFKLIEKIGHVNVMYLGLACNV--GRFLYYSYLQNPWM-VLPIEI-LQ  469 (618)
T ss_pred             HHHHHhhcCCcceeeeehhhhhccchHHHHHHHHHHHHHhcccceeeehhhHHH--HHHHHHHHhcCchh-eeeHHH-HH
Confidence            556678899999999988899999999999999999999999998776654211  11111133222221 223222 23


Q ss_pred             HHHHhhhhh-hhhhhhhhHHhhccCCcccchhHHHHHHHHHHH--HHHHHHHHHHhccCCCchhHHHHHHHH
Q 015168          314 LIVLSRLGH-MSYDIVGAQILQTGIPSSKANLIGTTEISVASL--VESVMLGVAIIANDVSHFGFLATLSLL  382 (412)
Q Consensus       314 g~~~sr~GL-w~~dl~~~~l~Q~~vp~~~~G~v~g~~~sl~~~--~~ll~~~~~~~~~~~~~f~~l~~~s~~  382 (412)
                      |+..   ++ |   .+..+++....||+++-++.|+.+.+-.+  .++.+.+.+....+-+....-.+..+.
T Consensus       470 git~---aliW---aa~~sY~s~vaPp~l~at~Q~l~~g~f~GlG~g~GslIGG~~v~~fg~~ttf~~~giA  535 (618)
T KOG3762|consen  470 GITH---ALIW---AAIISYASHVAPPGLRATAQGLLQGIFHGLGKGLGSLIGGFVVERFGARTTFRIFGIA  535 (618)
T ss_pred             HHHH---HHHH---HHHHHHHHhhCCCcchHHHHHHHHHHhcccCcchhhhhhhhhheeehhHHHHHHHHHH
Confidence            4422   32 4   46777888889999999999998888876  566666666666665554444444433

>COG2211 MelB Na+/melibiose symporter and related transporters [Carbohydrate transport and metabolism]

Probab=92.54  E-value=2.2  Score=44.30  Aligned_cols=157  Identities=14%  Similarity=0.193  Sum_probs=90.6

Q ss_pred             HHHHHHhcCCCCchhHHHhhHHHHHHHHHHHHHHHH----HHHhchhhH-HHHHHHHHHHHHHHHHHHHhcCCCcCcc-h
Q 015168          234 MTAFLTQRGLNPSIIGGFSGLCASMGVAATFLSAYL----VRRLGILKA-GAAGLIFQASLLAMAVAVYWSGSLSQQN-P  307 (412)
Q Consensus       234 ~~~y~~~~gls~~~~G~~~~~~avggllGt~l~~~l----~~R~g~~r~-~~~~~~~~~~~l~~~v~~~~~g~~~~~~-~  307 (412)
                      +.-|-+..|+|+...|.++...=+-=...--+.+.+    .+|+|+.|= ++++..   ...+.++..+.++..+... .
T Consensus        36 l~fYTdv~Gis~~~aG~iflv~RiiDAi~DP~~G~i~D~t~~r~GrfRP~lL~g~i---p~~i~~~l~F~~p~~~~~~k~  112 (467)
T COG2211          36 LFFYTDVFGLSAALAGTIFLVARIIDAITDPIMGFIVDRTRSRWGRFRPWLLWGAI---PFAIVAVLLFITPDFSMTGKL  112 (467)
T ss_pred             HHHHhcccCCcHHHHHHHHHHHHHHHHHhcchheeeecccccccccccHHHHHHhH---HHHHHHHHHHcCCCcccCcch
Confidence            444455689999999999877655444333333333    456777653 333322   3334444444443322111 1


Q ss_pred             HHHHHHHHHHhhhhhhhhhhhhhHHhhccC-CcccchhHHHHHHHHHHHHHHHHHHH-----HHhccCCCchhHHHHHHH
Q 015168          308 LLFFLCLIVLSRLGHMSYDIVGAQILQTGI-PSSKANLIGTTEISVASLVESVMLGV-----AIIANDVSHFGFLATLSL  381 (412)
Q Consensus       308 ~~l~~~g~~~sr~GLw~~dl~~~~l~Q~~v-p~~~~G~v~g~~~sl~~~~~ll~~~~-----~~~~~~~~~f~~l~~~s~  381 (412)
                      .+.++.-+ +-.++--+.|+....+--+.+ +++||-+.++.......+..++....     ....+++..+++...+.+
T Consensus       113 ~ya~vtY~-l~~l~YT~vniPy~al~~~iT~d~~ER~~l~s~R~~~~~~g~~l~~~~~~plv~~~g~~~~~~g~~~~~~~  191 (467)
T COG2211         113 IYALVTYM-LLGLGYTLVNIPYGALGPEITQDPQERASLTSWRMVFASLGGLLVAVLFPPLVKLFGGGDKALGYQGTALV  191 (467)
T ss_pred             HHHHHHHH-HHHHHHHheeCchhhcchhhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcchhhHHHHHHH
Confidence            22221111 112344456677777766666 66899999999888888754433322     334455558888888888


Q ss_pred             HHHHHHHHHHHHH
Q 015168          382 LSVVGAAWMFCHW  394 (412)
Q Consensus       382 ~~v~~~~~~~~~~  394 (412)
                      .++.....++..|
T Consensus       192 ~~vi~~i~~l~~~  204 (467)
T COG2211         192 LGVIGVILLLFCF  204 (467)
T ss_pred             HHHHHHHHHHHHH
Confidence            8877777777766

>PF03209 PUCC: PUCC protein; InterPro: IPR004896 This protein is required for high-level transcription of the PUC operon

Probab=90.51  E-value=12  Score=38.03  Aligned_cols=90  Identities=10%  Similarity=0.098  Sum_probs=53.0

Q ss_pred             HHHhhhhhhhhhhhhhHHhhccCCcccchhHHHHHHHHHHH-HHHHHHHHHHhccCCCchhHHHHHHHHH-HHHHHHHHH
Q 015168          315 IVLSRLGHMSYDIVGAQILQTGIPSSKANLIGTTEISVASL-VESVMLGVAIIANDVSHFGFLATLSLLS-VVGAAWMFC  392 (412)
Q Consensus       315 ~~~sr~GLw~~dl~~~~l~Q~~vp~~~~G~v~g~~~sl~~~-~~ll~~~~~~~~~~~~~f~~l~~~s~~~-v~~~~~~~~  392 (412)
                      ..+.++|+-.-..+...+.-+.+|||+|+++-++.-++-.. +-......+..+.+-++-....++...+ +.....+..
T Consensus        96 F~l~G~G~~~s~T~~lALl~D~~~e~~R~~~v~ivw~Mli~G~iv~ai~~g~lL~~~s~~rL~~v~~~~a~i~~~l~~ia  175 (403)
T PF03209_consen   96 FLLYGLGVHASGTSFLALLADLAPEERRPRVVAIVWVMLIVGIIVSAIVFGRLLDPFSPERLIQVIQGVALIALLLNLIA  175 (403)
T ss_pred             HHHHHhhHhHhHHHHHHHHHhcCCHhhhhhhHHHHHHHHHHHHHHHHHHHHHHccccCHHHHHHHHHHHHHHHHHHHHHH
Confidence            34445555444556666788889999999999998888665 3333333345555555555555554333 334445555


Q ss_pred             HHhcCCCccCCc
Q 015168          393 HWLLNPTDEQRS  404 (412)
Q Consensus       393 ~~~~~~~~~~~~  404 (412)
                      .|-.-+|+.+++
T Consensus       176 ~wg~E~r~~~~~  187 (403)
T PF03209_consen  176 LWGQEPRRSRRA  187 (403)
T ss_pred             HHhcccCCcccc
Confidence            664444444444

It is an integral membrane protein. The family includes other proteins form Rhodobacter eg. bacteriochlorophyll synthase.

>PF00083 Sugar_tr: Sugar (and other) transporter; InterPro: IPR005828 Recent genome-sequencing data and a wealth of biochemical and molecular genetic investigations have revealed the occurrence of dozens of families of primary and secondary transporters

Probab=90.27  E-value=0.005  Score=62.95  Aligned_cols=119  Identities=10%  Similarity=0.025  Sum_probs=73.6

Q ss_pred             CchhHHHhhHHHHHHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHHhcCCCcCcchHHHHHHHHHHhhhhhhh
Q 015168          245 PSIIGGFSGLCASMGVAATFLSAYLVRRLGILKAGAAGLIFQASLLAMAVAVYWSGSLSQQNPLLFFLCLIVLSRLGHMS  324 (412)
Q Consensus       245 ~~~~G~~~~~~avggllGt~l~~~l~~R~g~~r~~~~~~~~~~~~l~~~v~~~~~g~~~~~~~~~l~~~g~~~sr~GLw~  324 (412)
                      +...++..+...+|.++|+++.+.+.+|+|++++...+.....+..+..  .+.+..    .....+..+-++.++|.-.
T Consensus        45 ~~~~~~~~~~~~~g~~~G~~~~g~~~d~~GRk~~~~~~~~~~~i~~~~~--~~~~~~----~~~~~~~~~R~~~G~~~g~  118 (451)
T PF00083_consen   45 SLLSSLLTSSFFIGAIVGALIFGFLADRYGRKPALIISALLMIIGSILI--AFAPSY----NNFWMLLIGRFLIGFGIGG  118 (451)
T ss_pred             HHHHHHHHHHHHhhhcccccccccccccccccccccccccccccccccc--cccccc----ccccccccccccccccccc
Confidence            3457888899999999999999999999999998886655332222111  111100    0111111222222334333


Q ss_pred             hhhhhhHHhhccCCcccchhHHHHHHHHHHHHHHHHHHHHHhccC
Q 015168          325 YDIVGAQILQTGIPSSKANLIGTTEISVASLVESVMLGVAIIAND  369 (412)
Q Consensus       325 ~dl~~~~l~Q~~vp~~~~G~v~g~~~sl~~~~~ll~~~~~~~~~~  369 (412)
                      .-.....+..|..|++.||+..+........-.++...+.....+
T Consensus       119 ~~~~~~~~~~E~~~~~~R~~~~~~~~~~~~~G~~~~~~~~~~~~~  163 (451)
T PF00083_consen  119 AYVVSPIYISEIAPPKHRGFLSSLFQLFWALGILLASLIGYIVSY  163 (451)
T ss_pred             ccccccccccccccccccccccccccccccccccccccccccccc
Confidence            556777788999999999999988887765444444444433333

Two such families have been found to occur ubiquitously in all classifications of living organisms. These are the ATP-binding cassette (ABC) superfamily and the major facilitator superfamily (MFS), also called the uniporter-symporter-antiporter family. While ABC family permeases are in general multicomponent primary active transporters, capable of transporting both small molecules and macromolecules in response to ATP hydrolysis the MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients. Although well over 100 families of transporters have now been recognised and classified, the ABC superfamily and MFS account for nearly half of the solute transporters encoded within the genomes of microorganisms. They are also prevalent in higher organisms. The importance of these two families of transport systems to living organisms can therefore not be overestimated []. The MFS was originally believed to function primarily in the uptake of sugars but subsequent studies revealed that drug efflux systems, Krebs cycle metabolites, organophosphate:phosphate exchangers, oligosaccharide:H1 symport permeases, and bacterial aromatic acid permeases were all members of the MFS. These observations led to the probability that the MFS is far more widespread in nature and far more diverse in function than had been thought previously. 17 subgroups of the MFS have been identified []. Evidence suggests that the MFS permeases arose by a tandem intragenic duplication event in the early prokaryotes. This event generated a 2-transmembrane-spanner (TMS) protein topology from a primordial 6-TMS unit. Surprisingly, all currently recognised MFS permeases retain the two six-TMS units within a single polypeptide chain, although in 3 of the 17 MFS families, an additional two TMSs are found []. Moreover, the well-conserved MFS specific motif between TMS2 and TMS3 and the related but less well conserved motif between TMS8 and TMS9 [] prove to be a characteristic of virtually all of the more than 300 MFS proteins identified.; GO: 0022857 transmembrane transporter activity, 0055085 transmembrane transport, 0016021 integral to membrane

>PF05631 DUF791: Protein of unknown function (DUF791); InterPro: IPR008509 This family consists of several eukaryotic proteins of unknown function

Probab=88.92  E-value=17  Score=36.45  Aligned_cols=122  Identities=16%  Similarity=0.019  Sum_probs=70.5

Q ss_pred             HHHHH-H-hcCCCCchhHHHhhHHHHHHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHHhcCCCcCcchHHHH
Q 015168          234 MTAFL-T-QRGLNPSIIGGFSGLCASMGVAATFLSAYLVRRLGILKAGAAGLIFQASLLAMAVAVYWSGSLSQQNPLLFF  311 (412)
Q Consensus       234 ~~~y~-~-~~gls~~~~G~~~~~~avggllGt~l~~~l~~R~g~~r~~~~~~~~~~~~l~~~v~~~~~g~~~~~~~~~l~  311 (412)
                      +..|. + +.|+++.+++.++..|-+..++-..+.+.+..|+|++|.-+.-...+.   ..|+.-..+     ..++++.
T Consensus        55 pY~Y~LY~~yg~~~~qIa~Lf~~Gf~Ss~i~g~~~G~laD~~Grk~~cl~~cily~---~scl~k~~~-----~~~~L~~  126 (354)
T PF05631_consen   55 PYLYALYESYGFSEHQIAILFVAGFASSAIFGTFVGSLADRYGRKKACLLFCILYS---LSCLTKHSS-----NYPVLLL  126 (354)
T ss_pred             chhHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCchHHHHHHHHHHH---HHHHHHhcc-----ccHHHHH
Confidence            44553 2 579999999999999999988888888999999999887664433322   222222111     1222222


Q ss_pred             ---HHHHHHhhhhhhhhh-hhhhHHhhccCCcccchhHHHHHHHH-HHHHHHHHHHHH
Q 015168          312 ---LCLIVLSRLGHMSYD-IVGAQILQTGIPSSKANLIGTTEISV-ASLVESVMLGVA  364 (412)
Q Consensus       312 ---~~g~~~sr~GLw~~d-l~~~~l~Q~~vp~~~~G~v~g~~~sl-~~~~~ll~~~~~  364 (412)
                         ++|+..+-+-- .|. =-+.+..++..|++..+...+....+ |.....++.++.
T Consensus       127 GRvlgGiaTSLLfS-~FEsW~V~Eh~~~g~~~~~L~~tF~~~tf~~n~~vAI~aGv~a  183 (354)
T PF05631_consen  127 GRVLGGIATSLLFS-AFESWMVHEHNKRGFPQEWLSDTFSLATFFGNGVVAIGAGVVA  183 (354)
T ss_pred             HHHHHHHHHHHHHH-HHHHHHHHHHHHcCCChHHHHHHHHHHHHHHhHHHHHHHhHHH
Confidence               23444433322 011 11222344556778888887766644 333455555544

>KOG2504 consensus Monocarboxylate transporter [Carbohydrate transport and metabolism]

Probab=88.43  E-value=3.2  Score=43.77  Aligned_cols=134  Identities=18%  Similarity=0.060  Sum_probs=83.5

Q ss_pred             HHhcCCCCchhHHHhhHHHHHHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHHhcCCCcCcchHHHHHHHHHH
Q 015168          238 LTQRGLNPSIIGGFSGLCASMGVAATFLSAYLVRRLGILKAGAAGLIFQASLLAMAVAVYWSGSLSQQNPLLFFLCLIVL  317 (412)
Q Consensus       238 ~~~~gls~~~~G~~~~~~avggllGt~l~~~l~~R~g~~r~~~~~~~~~~~~l~~~v~~~~~g~~~~~~~~~l~~~g~~~  317 (412)
                      .++++-+..+++++.++..-..+...-+...+.+|+|-+.+.+.|..+.....+.  ..+.. +   ...+++..+-+..
T Consensus        73 ~~~f~~s~~~~~~i~sl~~~~~~~~gpl~s~l~~rfg~R~v~i~G~~v~~~g~~l--ssF~~-~---i~~l~lt~gvi~G  146 (509)
T KOG2504|consen   73 MDYFGSSSSQIAWIGSLLLGVYLLAGPLVSALCNRFGCRTVMIAGGLVAALGLLL--SSFAT-S---LWQLYLTFGVIGG  146 (509)
T ss_pred             HHHhCCCccHHHHHHHHHHHHHHHhccHHHHHHhhcCchHHHHHHHHHHHHHHHH--HHHHh-h---HHHHHHHHHHHhh
Confidence            4568999999999999999999999999999999999999888776643322222  13322 1   1222222222333


Q ss_pred             hhhhhhhhhhhhhHHhhccCCcccchhHHHHHHHHHHH-HHHHHHHHHHhccCCCchhHHHHHH
Q 015168          318 SRLGHMSYDIVGAQILQTGIPSSKANLIGTTEISVASL-VESVMLGVAIIANDVSHFGFLATLS  380 (412)
Q Consensus       318 sr~GLw~~dl~~~~l~Q~~vp~~~~G~v~g~~~sl~~~-~~ll~~~~~~~~~~~~~f~~l~~~s  380 (412)
                      -++|+ ++..+...+-  .-++++|+.++|+..+=.-. ..+...+.-.+....+-+....+..
T Consensus       147 ~G~~~-~~~paiviv~--~YF~kkR~lA~Gia~~GsG~G~~~~~~l~~~l~~~~G~r~~~l~~~  207 (509)
T KOG2504|consen  147 LGLGL-IYLPAVVILG--TYFEKKRALATGIAVSGTGVGTVVFPPLLKYLLSKYGWRGALLIFG  207 (509)
T ss_pred             ccchh-hhcchhhhhh--hHhHHHHHHHHhhhhccCCcceeeHHHHHHHHHHHhCcHHHHHHHH
Confidence            34444 4444444333  34899999999998776554 2333333345555555555555444

>TIGR00788 fbt folate/biopterin transporter

Probab=88.29  E-value=14  Score=38.32  Aligned_cols=105  Identities=15%  Similarity=0.137  Sum_probs=60.1

Q ss_pred             HHHH-hcCCCCchhHHHhhHHHHHHHHHHHHHHHHHHHhc-----hhhHHHHHHHHHHHHHHHHHHHHhcCCCcCcchHH
Q 015168          236 AFLT-QRGLNPSIIGGFSGLCASMGVAATFLSAYLVRRLG-----ILKAGAAGLIFQASLLAMAVAVYWSGSLSQQNPLL  309 (412)
Q Consensus       236 ~y~~-~~gls~~~~G~~~~~~avggllGt~l~~~l~~R~g-----~~r~~~~~~~~~~~~l~~~v~~~~~g~~~~~~~~~  309 (412)
                      .|++ ++|+|+++++.+.+...+....-.+ .+.+..|++     +++.+.++...   +...+.... ....+ .....
T Consensus        50 ~~l~~~lg~s~~~i~~~~sl~~lpw~~K~l-~g~l~D~~~i~G~rRr~~l~~~~~l---~~~~~~~~l-~~~~~-~~~~~  123 (468)
T TIGR00788        50 PMLTDDLGLDGARYQRLVGLSSLGWALKPF-AGVMSDTFPLFGYTKRWYLVLSGLL---GSAILYGLL-PGKVS-SAKVA  123 (468)
T ss_pred             HHHHHhcCCCHHHHHHHHHHHHHHHHHHHH-HHHHHHhcCCCCccchHHHHHHHHH---HHHHHHHhc-ccccc-hHHHH
Confidence            3455 5899999999999999999998777 899999986     33334433222   111111111 11111 11111


Q ss_pred             HHHHHHHHhhhhhhhhhhhhhHHhhccCCcccchhHHHHH
Q 015168          310 FFLCLIVLSRLGHMSYDIVGAQILQTGIPSSKANLIGTTE  349 (412)
Q Consensus       310 l~~~g~~~sr~GLw~~dl~~~~l~Q~~vp~~~~G~v~g~~  349 (412)
                      .  ..+.+..++-...|++...+.-|..+ ++++..++.|
T Consensus       124 ~--~~~~l~~~~~a~~dv~~da~~~e~~~-~~~~~~~~~~  160 (468)
T TIGR00788       124 A--AFIFLAALAKALYDVLVDSLYSERIR-ESPSAGPSLV  160 (468)
T ss_pred             H--HHHHHHHHHHHHHHHhHHHHHhhhhh-cCCCcCCCee
Confidence            1  12233344555688888888777777 4444444444

The only functionally characterized members of the family are from protozoa and include FT1, the major folate transporter in Leishmania, and BT1, the Leishmania biopterin/folate transporter. A related protein in Trypanosoma brucei, ESAGIO, shows weak folate/biopterin transport activity.

>KOG3764 consensus Vesicular amine transporter [Intracellular trafficking, secretion, and vesicular transport]

Probab=86.90  E-value=6  Score=40.36  Aligned_cols=146  Identities=18%  Similarity=0.116  Sum_probs=92.5

Q ss_pred             hcCCCCchhHHHhhHHHHHHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHHhcCCCcCcchHHHHHHHHHHhh
Q 015168          240 QRGLNPSIIGGFSGLCASMGVAATFLSAYLVRRLGILKAGAAGLIFQASLLAMAVAVYWSGSLSQQNPLLFFLCLIVLSR  319 (412)
Q Consensus       240 ~~gls~~~~G~~~~~~avggllGt~l~~~l~~R~g~~r~~~~~~~~~~~~l~~~v~~~~~g~~~~~~~~~l~~~g~~~sr  319 (412)
                      .++-++..+|++++.-|+..++-+-..+.+..|+|.+-.+.+|+.......+    .+..+.   ..+++++  .=.+.+
T Consensus       100 ~~~~e~~~iG~LFaskA~~qllvnp~~G~l~~~iGy~ipm~~Gl~vmf~sTi----lFafg~---sy~~l~v--AR~LQg  170 (464)
T KOG3764|consen  100 SLDRENTQIGLLFASKALVQLLVNPFFGNLIDRIGYKIPMVAGLFVMFLSTI----LFAFGN---SYPMLFV--ARSLQG  170 (464)
T ss_pred             CccccccchhHHHHHHHHHHHHhcccchhhHHHhccccHHHHHHHHHHHHHH----HHHHcc---hhHHHHH--HHHHhh
Confidence            3677889999999999999999999999999999998777777654322211    222222   1222222  334455


Q ss_pred             hhhhhhhhhhhHHhhccC-CcccchhHHHHHHHHHHHHHHHHHHHHHhcc--CCCchhHHHHHHHHHHHHHHHHHHHH
Q 015168          320 LGHMSYDIVGAQILQTGI-PSSKANLIGTTEISVASLVESVMLGVAIIAN--DVSHFGFLATLSLLSVVGAAWMFCHW  394 (412)
Q Consensus       320 ~GLw~~dl~~~~l~Q~~v-p~~~~G~v~g~~~sl~~~~~ll~~~~~~~~~--~~~~f~~l~~~s~~~v~~~~~~~~~~  394 (412)
                      +|--..|.+-..+.-... .|++||++.|..-..-.+-.++.+..+.++.  -+.+-|.+++..++.+-.+.-+|...
T Consensus       171 vgsA~~~tsglamlAd~f~~d~er~~vmGialgfislG~lvgPpfGGilYe~~Gk~aPFlVL~~v~Lld~~L~l~vi~  248 (464)
T KOG3764|consen  171 VGSAFADTSGLAMLADVFPEDNERGSVMGIALGFISLGVLVGPPFGGILYEFAGKSAPFLVLAIVLLLDGALQLLVIE  248 (464)
T ss_pred             hhHHHHHhhhHHHHHHHcccchhhhHHHHHHHHHHhccceecCCcccchHhhcCCcCcHHHHHHHHHHHHHHHHheeC
Confidence            566556666555555554 5567899988876666655666666666663  34455555555554444555555444

>COG2270 Permeases of the major facilitator superfamily [General function prediction only]

Probab=86.82  E-value=2.9  Score=42.77  Aligned_cols=118  Identities=14%  Similarity=0.124  Sum_probs=77.2

Q ss_pred             chhhHHHHHHhhhhhcchhccCCcHHHHHHHHHHHHHHHHHHHHHHHHHhccccccccchhHHHHHHHHHHHHHHHHHhh
Q 015168            2 GFFSKLILIVGGPLVGKLMDHSPRIPAYICLNTVQAAAQLLSAAMIIHAHTVIPTSSSMLLHPWFFVLVLAGAVERLTGV   81 (412)
Q Consensus         2 g~~~~lp~ll~g~~~G~~vDr~~R~~v~~~~~~~q~~~v~~s~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~l~~~   81 (412)
                      |.+.++--++.+..+|.+-||.+-|+++....+      ..+.++ ++....+.+    .  ..+...+++|..     .
T Consensus       294 g~~~~vvA~lg~ii~g~Ld~rfg~k~vl~~~lv------i~~~~~-~~~~~~~~~----~--~f~i~gll~g~s-----~  355 (438)
T COG2270         294 GIALSVVAALGAIIAGFLDERFGSKPVLMIGLV------ILSIAA-LYLIFLEGE----L--DFWILGLLVGTS-----L  355 (438)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhCCceeehHHHH------HHHHHH-HHHHHcccc----H--HHHHHHHHHHHh-----c
Confidence            455666677888899999999987787666543      222221 222233221    1  111222233322     3


Q ss_pred             hhhhhhcccceeeecCCCchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhcC-hhHHHH
Q 015168           82 ALGVAVERDWAVLLAGINRPIALAKANAVLNRIDLLCEIAGASLFGILLSKYE-PVTCLK  140 (412)
Q Consensus        82 a~~~ai~RDwv~~l~~~~~~~~L~~~Ns~l~~id~v~~llgP~lgG~L~~~~~-~~~~~~  140 (412)
                      +-..|..|.|.-.+++++   +-.+.-+.....+..+.++||.+.|.+.+..| -+..+.
T Consensus       356 G~~qA~SRSy~~~lvp~~---k~~~fFglyaltgra~S~~gp~lv~v~t~iTg~~r~g~~  412 (438)
T COG2270         356 GGAQASSRSYLARLVPKG---KEGRFFGLYALTGRAASFLGPFLVAVITQITGSSRAGVL  412 (438)
T ss_pred             chHHHHHHHHHHHhCCCc---cccceeehhhhhhhHHHHHHHHHHHHHHHHhcchhhHHH
Confidence            555677888888899975   67788888899999999999999999999876 334433

>TIGR01272 gluP glucose/galactose transporter

Probab=86.02  E-value=13  Score=36.21  Aligned_cols=109  Identities=14%  Similarity=0.040  Sum_probs=56.6

Q ss_pred             HHHhhhhhcchhccCCcHHHHHHHHHHHHHHHHHHHHHHHHHhccccccccchhHHHHHHHHHHHHHHHHHhhhhhhhhc
Q 015168            9 LIVGGPLVGKLMDHSPRIPAYICLNTVQAAAQLLSAAMIIHAHTVIPTSSSMLLHPWFFVLVLAGAVERLTGVALGVAVE   88 (412)
Q Consensus         9 ~ll~g~~~G~~vDr~~R~~v~~~~~~~q~~~v~~s~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~l~~~a~~~ai~   88 (412)
                      ..+-....+.+.||++++|+++.+.....+.    .  ++......      . ..++...+..-..+..+......+.+
T Consensus       191 ~~iGr~~~~~l~~r~g~~~~l~~~~~l~~~~----~--~l~~~~~~------~-~~~~~~~l~g~~~s~i~P~~~s~a~~  257 (310)
T TIGR01272       191 AMVGRFIGSAVMPMISQGRYLAFNAFLAVLL----S--IGAALTHG------Y-VAMWFVLALGLFNSIMFPTIFSLALN  257 (310)
T ss_pred             HHHHHHHHHHHHHHhCHHHHHHHHHHHHHHH----H--HHHHHcCC------H-HHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence            3344456677899999999877665433222    1  11112111      1 12222222222223333333333332


Q ss_pred             ccceeeecCCCchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhcChhHHHHH
Q 015168           89 RDWAVLLAGINRPIALAKANAVLNRIDLLCEIAGASLFGILLSKYEPVTCLKF  141 (412)
Q Consensus        89 RDwv~~l~~~~~~~~L~~~Ns~l~~id~v~~llgP~lgG~L~~~~~~~~~~~~  141 (412)
                      +      .++    +-.++.+. .....+...+.|.+.|.+.+..|.+.++++
T Consensus       258 ~------~~~----~~~~asai-~~~~~~Gg~i~P~l~G~lad~~g~~~a~~v  299 (310)
T TIGR01272       258 A------LGR----HTSQGSGI-LCLAIVGGAIVPLLQGSLADCLGIQLAFAL  299 (310)
T ss_pred             h------hhh----hhhhhHHH-HHHHHhcchHHHHHHHHHHHhccchHHHHH
Confidence            1      222    22233333 356667789999999999998887777653

Disruption of the loci leads to the total loss of glucose or galactose uptake in E.coli. Putative transporters in other bacterial species were isolated by functional complementation, which restored it functional activity.

>KOG0253 consensus Synaptic vesicle transporter SV2 (major facilitator superfamily) [General function prediction only]

Probab=83.81  E-value=5.9  Score=40.21  Aligned_cols=92  Identities=11%  Similarity=0.013  Sum_probs=49.5

Q ss_pred             hhhcchhccCCcHHHHHHHHHHHHHHHHHHHHHHHHHhccccccccchhHHHHHHHHHHHHHHHHHhhhhhhhhccccee
Q 015168           14 PLVGKLMDHSPRIPAYICLNTVQAAAQLLSAAMIIHAHTVIPTSSSMLLHPWFFVLVLAGAVERLTGVALGVAVERDWAV   93 (412)
Q Consensus        14 ~~~G~~vDr~~R~~v~~~~~~~q~~~v~~s~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~l~~~a~~~ai~RDwv~   93 (412)
                      +..|..|||.+||+.|..+.++-       ++..+.++.... .  ..      ...++-....+.|.+.|.+..  |-|
T Consensus       399 LIt~~iverlGRKkTMal~l~~f-------~iflfll~~c~~-r--n~------~tvllf~arafisg~fqvaYv--YtP  460 (528)
T KOG0253|consen  399 LITGVIVERLGRKKTMALSLILF-------GIFLFLLTTCKT-R--NA------YTVLLFTARAFISGAFQVAYV--YTP  460 (528)
T ss_pred             hHHHHHHHHhcchhHHHHHHHHH-------HHHHHHHHHhcC-c--ch------hHHHHHHHHHHHhchheEEEE--ecC
Confidence            46788999999999999986532       221122222111 0  01      112222334445566666665  889


Q ss_pred             eecCCCchhhhHHHHHHHHHHHHHHHHHHHHHH
Q 015168           94 LLAGINRPIALAKANAVLNRIDLLCEIAGASLF  126 (412)
Q Consensus        94 ~l~~~~~~~~L~~~Ns~l~~id~v~~llgP~lg  126 (412)
                      .+++..   --+..-..-..+.-+.-++.|.++
T Consensus       461 EVyPTa---vRatgvGtcSsmaRIggI~~p~iA  490 (528)
T KOG0253|consen  461 EVYPTA---VRATGVGTCSSMARIGGIFSPVIA  490 (528)
T ss_pred             cccchh---hhhcchhhhhhHHhhhhhhhhHHH
Confidence            998853   222222333333334556777777

>PF05978 UNC-93: Ion channel regulatory protein UNC-93; InterPro: IPR010291 The proteins in this family are represented by UNC-93 from Caenorhabditis elegans

Probab=81.90  E-value=35  Score=29.96  Aligned_cols=88  Identities=10%  Similarity=0.030  Sum_probs=53.3

Q ss_pred             HHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHHhcCCCcCcchHHHHHHHHHHhhhhhhhhhhhhhHHhhccC
Q 015168          258 MGVAATFLSAYLVRRLGILKAGAAGLIFQASLLAMAVAVYWSGSLSQQNPLLFFLCLIVLSRLGHMSYDIVGAQILQTGI  337 (412)
Q Consensus       258 ggllGt~l~~~l~~R~g~~r~~~~~~~~~~~~l~~~v~~~~~g~~~~~~~~~l~~~g~~~sr~GLw~~dl~~~~l~Q~~v  337 (412)
                      ...+.++..|.+.+++|.++++.++.....+..   ...+++..      ..++. +-++.++|--.+-.++..++-+..
T Consensus        49 ~~~~s~l~~P~iv~~lg~K~sm~lg~~~y~~y~---~~~~~~~~------~~l~~-~s~l~G~~~a~lW~aqg~ylt~~s  118 (156)
T PF05978_consen   49 SFAISCLFAPSIVNKLGPKWSMILGSLGYAIYI---ASFFYPNS------YTLYP-ASALLGFGAALLWTAQGTYLTSYS  118 (156)
T ss_pred             HHHHHHHhHHHHHHHHhhHHHHHHHHHHHHHHH---HHHHhhhH------HHHHH-HHHHHhhhhHHhhHhhhHHHHHcC
Confidence            345667889999999999999988865433221   11333311      11111 111223332234456667777777


Q ss_pred             CcccchhHHHHHHHHHHH
Q 015168          338 PSSKANLIGTTEISVASL  355 (412)
Q Consensus       338 p~~~~G~v~g~~~sl~~~  355 (412)
                      .++.++|-.|+.-++...
T Consensus       119 ~~~~~~~~~~ifw~i~~~  136 (156)
T PF05978_consen  119 TEETIGRNTGIFWAIFQS  136 (156)
T ss_pred             CHHHHhhHHHHHHHHHHH
Confidence            889999988887777664

UNC-93 colocalizes with SUP-10 and SUP-9 within muscle cells. Genetic studies suggest that these three proteins forms complex that coordinates muscle contraction. The function of UNC-93 is not known but is most likely an ion channel regulatory protein [].

>KOG3574 consensus Acetyl-CoA transporter [Inorganic ion transport and metabolism]

Probab=80.58  E-value=69  Score=32.87  Aligned_cols=64  Identities=9%  Similarity=0.080  Sum_probs=35.8

Q ss_pred             HHHhcCCcchHHHHHHHHH-HHhhhccchHHHHHHHhcCCCCchhHHHhhHHHHHHHHHHHHHHHH
Q 015168          205 KEYMQQPVLPASLAYVLLC-LNVVLTPGSLMTAFLTQRGLNPSIIGGFSGLCASMGVAATFLSAYL  269 (412)
Q Consensus       205 ~~~~~~~v~~~~~~~a~l~-~t~v~~~~~~~~~y~~~~gls~~~~G~~~~~~avggllGt~l~~~l  269 (412)
                      +...+-|-.+....+-+.+ +. -...|++...-+.++|+|...+++.--......+.+....++.
T Consensus       259 ~~vLklk~v~~la~i~lt~K~g-f~a~da~t~LkLle~Gv~ke~Lal~~v~~~plqI~l~~~~gk~  323 (510)
T KOG3574|consen  259 RDVLKLKSVRWLAGILLTGKLG-FQAADALTSLKLLEHGVPKEELALIAVPLVPLQIALPLYIGKW  323 (510)
T ss_pred             HHHHcCccHHHHHHHHHHHHHH-hhhhhhccchHHHHcCCChhHheeeeeehhhHHHhhhhhheee
Confidence            3344445444433333333 33 1344556666677999999998887755555555544444443

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

No hit with e-value below 0.005

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	412
1pw4_A	451	Glycerol-3-phosphate transporter; transmembrane, i	99.81
3o7q_A	438	L-fucose-proton symporter; transporter, multi-PASS	99.71
4aps_A	491	DI-OR tripeptide H+ symporter; transport protein,	99.67
2gfp_A	375	EMRD, multidrug resistance protein D; membrane pro	99.64
2cfq_A	417	Lactose permease; transport, transport mechanism,	99.37
2xut_A	524	Proton/peptide symporter family protein; transport	99.25
4gc0_A	491	D-xylose-proton symporter; MFS, transport protein;	98.98
3o7q_A	438	L-fucose-proton symporter; transporter, multi-PASS	98.43
1pw4_A	451	Glycerol-3-phosphate transporter; transmembrane, i	98.3
2gfp_A	375	EMRD, multidrug resistance protein D; membrane pro	98.26
4aps_A	491	DI-OR tripeptide H+ symporter; transport protein,	98.26
2xut_A	524	Proton/peptide symporter family protein; transport	98.14
4gc0_A	491	D-xylose-proton symporter; MFS, transport protein;	97.21
2cfq_A	417	Lactose permease; transport, transport mechanism,	96.47

>1pw4_A Glycerol-3-phosphate transporter; transmembrane, inner membrane, major facilitator superfamily, secondary active membrane transporter; 3.30A {Escherichia coli} SCOP: f.38.1.1

Probab=99.81  E-value=1.5e-17  Score=166.80  Aligned_cols=353  Identities=10%  Similarity=-0.008  Sum_probs=204.1

Q ss_pred             hhHHHHHHhhhhhcchhccCCcHHHHHHHHHHHHHHHHHHHHHHHHHh--ccccccccchhHHHHHHHHHHHHHHHHHhh
Q 015168            4 FSKLILIVGGPLVGKLMDHSPRIPAYICLNTVQAAAQLLSAAMIIHAH--TVIPTSSSMLLHPWFFVLVLAGAVERLTGV   81 (412)
Q Consensus         4 ~~~lp~ll~g~~~G~~vDr~~R~~v~~~~~~~q~~~v~~s~~~~~~~~--~~~~~~~~~~~~~l~~~~~~~g~~~~l~~~   81 (412)
                      +..++..+..++.|.+.||++||+++..+.+...+...+.    .+..  ...      . +.+++.-++.|........
T Consensus        70 ~~~~~~~~~~~~~G~l~dr~g~r~~l~~~~~~~~~~~~~~----~~~~~~~~~------~-~~l~~~~~l~G~~~~~~~~  138 (451)
T 1pw4_A           70 GISIAYGFSKFIMGSVSDRSNPRVFLPAGLILAAAVMLFM----GFVPWATSS------I-AVMFVLLFLCGWFQGMGWP  138 (451)
T ss_dssp             HHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHH----HHCHHHHSS------S-SHHHHHHHHHHHHHHHTHH
T ss_pred             HHHHHHHHHHHhHHHHHHhcCchHHHHHHHHHHHHHHHHH----Hhhhhcccc------H-HHHHHHHHHHHHHhhhccc
Confidence            3467788899999999999999999998877654432211    1100  111      1 2344445566666655555


Q ss_pred             hhhhhhcccceeeecCCCchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhcC-hhHHHHHHHHHHHHHHHHHHHHHHHh
Q 015168           82 ALGVAVERDWAVLLAGINRPIALAKANAVLNRIDLLCEIAGASLFGILLSKYE-PVTCLKFAAGLIMWSLPVMIILTWFT  160 (412)
Q Consensus        82 a~~~ai~RDwv~~l~~~~~~~~L~~~Ns~l~~id~v~~llgP~lgG~L~~~~~-~~~~~~~~~~~~~~s~~~~~~~l~~~  160 (412)
                      +... +..|    .++++   +..++++.......++.++||.++|.+....+ |+..+++.+....+....      ..
T Consensus       139 ~~~~-~i~~----~~~~~---~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~g~w~~~f~~~~~~~~~~~~~------~~  204 (451)
T 1pw4_A          139 PCGR-TMVH----WWSQK---ERGGIVSVWNCAHNVGGGIPPLLFLLGMAWFNDWHAALYMPAFCAILVALF------AF  204 (451)
T ss_dssp             HHHH-HHHT----TCTTT---HHHHHHHHHHHHHHHHHTSHHHHHHHHHHHTCCSTTCTHHHHHHHHHHHHH------HH
T ss_pred             hHHH-HHHH----HCCch---hhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHH------HH
Confidence            5443 3334    56643   78999999999999999999999999999898 999877655444433321      11


Q ss_pred             hhccccccccccccc-cccCCCCCCCCCCchhhhHHhHHHHHHhHHHHhcCCcchHHHHHHHHH-HHhhhccchHHHHHH
Q 015168          161 NKISSGVLDRAKCSQ-SCCRTSNEGPVPDADNIVDVGIEAIKLGWKEYMQQPVLPASLAYVLLC-LNVVLTPGSLMTAFL  238 (412)
Q Consensus       161 ~~~~~~~l~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~v~~~~~~~a~l~-~t~v~~~~~~~~~y~  238 (412)
                      ..++|+ +++++..+ ++.+++++.+..+..+. +...++  .-++..+++|.++.......++ +. ...+....+.|+
T Consensus       205 ~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~  279 (451)
T 1pw4_A          205 AMMRDT-PQSCGLPPIEEYKNDYPDDYNEKAEQ-ELTAKQ--IFMQYVLPNKLLWYIAIANVFVYLL-RYGILDWSPTYL  279 (451)
T ss_dssp             HHCCCS-STTTCCCSCTTTCCC--------------CCTH--HHHHHTSSCHHHHHHHHHHHHHHHH-HHHHHHHHHHHB
T ss_pred             hhccCC-HhhcCCCChhhhcccccccchhhhhc-cccccc--chHHHHHcCHHHHHHHHHHHHHHHH-HHHHHHHHHHHH
Confidence            223331 11111100 00000000000000000 000111  0156678888877754443333 22 233444566677


Q ss_pred             Hh-cCCCCchhHHHhhHHHHHHHHHHHHHHHHHHHh--chhhHHHHHHHHHHHHHHHHHHHHhcCCCcCcchHHHHHHHH
Q 015168          239 TQ-RGLNPSIIGGFSGLCASMGVAATFLSAYLVRRL--GILKAGAAGLIFQASLLAMAVAVYWSGSLSQQNPLLFFLCLI  315 (412)
Q Consensus       239 ~~-~gls~~~~G~~~~~~avggllGt~l~~~l~~R~--g~~r~~~~~~~~~~~~l~~~v~~~~~g~~~~~~~~~l~~~g~  315 (412)
                      ++ +|+++...|++.+...+++++|.++.+++.+|+  |.++...++.....   ..+...+...+ .  ..........
T Consensus       280 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~-~--~~~~~~~~~~  353 (451)
T 1pw4_A          280 KEVKHFALDKSSWAYFLYEYAGIPGTLLCGWMSDKVFRGNRGATGVFFMTLV---TIATIVYWMNP-A--GNPTVDMICM  353 (451)
T ss_dssp             TTBSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSTTCHHHHHHHHHHHH---HHHHHHTTSCC-T--TCHHHHHHHH
T ss_pred             HHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCchhHHHHHHHHH---HHHHHHHHHhc-c--cCHHHHHHHH
Confidence            76 799999999999999999999999999999999  88877665543221   11111111111 0  0111111222


Q ss_pred             HHhhhhhhhhhhhhhHHhhccCCcccchhHHHHHHHHHHH-HHHHHHHHHHhccCC-CchhHHHHHHHHHHHHHHHHHH
Q 015168          316 VLSRLGHMSYDIVGAQILQTGIPSSKANLIGTTEISVASL-VESVMLGVAIIANDV-SHFGFLATLSLLSVVGAAWMFC  392 (412)
Q Consensus       316 ~~sr~GLw~~dl~~~~l~Q~~vp~~~~G~v~g~~~sl~~~-~~ll~~~~~~~~~~~-~~f~~l~~~s~~~v~~~~~~~~  392 (412)
                      ++.+++..........+.++.+|+++||++.|+.++.++. ...+...+.....+. +......+.+...+.+....+.
T Consensus       354 ~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~~~~~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~  432 (451)
T 1pw4_A          354 IVIGFLIYGPVMLIGLHALELAPKKAAGTAAGFTGLFGYLGGSVAASAIVGYTVDFFGWDGGFMVMIGGSILAVILLIV  432 (451)
T ss_dssp             HHHHHHHTHHHHHHHHHHHHTSCTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCSHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHhchHHHHHHHHHHHhchhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHH
Confidence            2333444445555678889999999999999999999998 776666665444333 3223333334333444433333

>3o7q_A L-fucose-proton symporter; transporter, multi-PASS membrane protei transport protein; HET: BNG; 3.14A {Escherichia coli} PDB: 3o7p_A*

Probab=99.71  E-value=8.4e-15  Score=146.33  Aligned_cols=306  Identities=10%  Similarity=-0.008  Sum_probs=182.3

Q ss_pred             hhHHHHHHhhhhhcchhccCCcHHHHHHHHHHHHHHHHHHHHHHHHHhccccccccchhHHHHHHHHHHHHHHHHHhhhh
Q 015168            4 FSKLILIVGGPLVGKLMDHSPRIPAYICLNTVQAAAQLLSAAMIIHAHTVIPTSSSMLLHPWFFVLVLAGAVERLTGVAL   83 (412)
Q Consensus         4 ~~~lp~ll~g~~~G~~vDr~~R~~v~~~~~~~q~~~v~~s~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~l~~~a~   83 (412)
                      +..+...+..++.|.+.||++||+++..+.+...+...+..   ...+..       ..+.+++.-++.|........+.
T Consensus        69 ~~~~~~~i~~~~~G~l~dr~g~r~~l~~~~~~~~~~~~~~~---~~~~~~-------~~~~l~~~~~l~G~~~~~~~~~~  138 (438)
T 3o7q_A           69 AFYFGYFIIPIPAGILMKKLSYKAGIITGLFLYALGAALFW---PAAEIM-------NYTLFLVGLFIIAAGLGCLETAA  138 (438)
T ss_dssp             HHHHHHHTTHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHHH---HHHHTT-------CHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHhHHHHHHHhcchHHHHHHHHHHHHHHHHHH---hccccc-------cHHHHHHHHHHHHhhHHHhhhhH
Confidence            34567788999999999999999998888765543322110   001111       11344455556666666665554


Q ss_pred             hhhhcccceeeecCCCchhhhHHHHHHHHHHHHHHHHHHHHHHHHHH-hhcC-------------------------hhH
Q 015168           84 GVAVERDWAVLLAGINRPIALAKANAVLNRIDLLCEIAGASLFGILL-SKYE-------------------------PVT  137 (412)
Q Consensus        84 ~~ai~RDwv~~l~~~~~~~~L~~~Ns~l~~id~v~~llgP~lgG~L~-~~~~-------------------------~~~  137 (412)
                      .. +..|    .++++   +..+.++..+....++.++||.+++.+. ...+                         |+.
T Consensus       139 ~~-~~~~----~~~~~---~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~  210 (438)
T 3o7q_A          139 NP-FVTV----LGPES---SGHFRLNLAQTFNSFGAIIAVVFGQSLILSNVPHQSQDVLDKMSPEQLSAYKHSLVLSVQT  210 (438)
T ss_dssp             HH-HHHH----SSCST---THHHHHHHHHHHHHHHHHHHHHHTTHHHHTSSCCCCHHHHHHSCHHHHHHHHHHHHHHHHH
T ss_pred             HH-HHHH----HcCch---hHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccccccccccCCcchhhhhhhhhhhhHHH
Confidence            33 3334    55643   6788899999999999999999999999 6554                         777


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHhhhccccccccccccccccCCCCCCCCCCchhhhHHhHHHHHHhHHHHhcCCcchHHH
Q 015168          138 CLKFAAGLIMWSLPVMIILTWFTNKISSGVLDRAKCSQSCCRTSNEGPVPDADNIVDVGIEAIKLGWKEYMQQPVLPASL  217 (412)
Q Consensus       138 ~~~~~~~~~~~s~~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~v~~~~~  217 (412)
                      .+++......+...     .....+.||..  ++++.    ++    +  +         ++..+.++..+++|.++...
T Consensus       211 ~~~~~~~~~~~~~~-----~~~~~~~p~~~--~~~~~----~~----~--~---------~~~~~~~~~~~~~~~~~~~~  264 (438)
T 3o7q_A          211 PYMIIVAIVLLVAL-----LIMLTKFPALQ--SDNHS----DA----K--Q---------GSFSASLSRLARIRHWRWAV  264 (438)
T ss_dssp             HHHHHHHHHHHHHH-----HHHHCCCCCCT--TTCCC----CS----S--T---------TSHHHHHHHHTTCSHHHHHH
T ss_pred             HHHHHHHHHHHHHH-----HHHHHcCCccc--ccccc----cc----c--c---------cchhhhHHHHHhChHHHHHH
Confidence            76543332222221     11122333311  10000    00    0  0         11235677889999888755


Q ss_pred             HHHHHHHHhhhccchHHHHH-HHh-cCCCCchhHHHhhHHHHHHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHH
Q 015168          218 AYVLLCLNVVLTPGSLMTAF-LTQ-RGLNPSIIGGFSGLCASMGVAATFLSAYLVRRLGILKAGAAGLIFQASLLAMAVA  295 (412)
Q Consensus       218 ~~a~l~~t~v~~~~~~~~~y-~~~-~gls~~~~G~~~~~~avggllGt~l~~~l~~R~g~~r~~~~~~~~~~~~l~~~v~  295 (412)
                      ....++......+....+.| +++ +|+++...|...+...+++++|.++.+++.+|+|+++...++.....++...   
T Consensus       265 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~~r~~~~~~~~~~~~~~~~~~~~---  341 (438)
T 3o7q_A          265 LAQFCYVGAQTACWSYLIRYAVEEIPGMTAGFAANYLTGTMVCFFIGRFTGTWLISRFAPHKVLAAYALIAMALCLI---  341 (438)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHSTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHH---
T ss_pred             HHHHHHHHHHHHHHHHHHHHhhhccCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHH---
Confidence            54444422123334456677 776 4999999999999999999999999999999999999887766543322221   


Q ss_pred             HHhcCCCcCcchHHHHHHHHHHhhhhhhhhhhhhhHHhhccCCcccchhHHHHHHHHHHHHHHHHHHHHH
Q 015168          296 VYWSGSLSQQNPLLFFLCLIVLSRLGHMSYDIVGAQILQTGIPSSKANLIGTTEISVASLVESVMLGVAI  365 (412)
Q Consensus       296 ~~~~g~~~~~~~~~l~~~g~~~sr~GLw~~dl~~~~l~Q~~vp~~~~G~v~g~~~sl~~~~~ll~~~~~~  365 (412)
                      ......  ......+++.|+   ..+.  .......+.++..|++ +++.++... .++....+...+..
T Consensus       342 ~~~~~~--~~~~~~~~~~g~---~~~~--~~~~~~~~~~~~~~~~-~~~~~~~~~-~~~~g~~~~~~~~g  402 (438)
T 3o7q_A          342 SAFAGG--HVGLIALTLCSA---FMSI--QYPTIFSLGIKNLGQD-TKYGSSFIV-MTIIGGGIVTPVMG  402 (438)
T ss_dssp             HHHCCH--HHHHHHHHHHHH---HHTT--HHHHHHHHHHSSCGGG-HHHHHHHHH-HTTHHHHHHHHHHH
T ss_pred             HHHcCC--cHHHHHHHHHHH---HHHH--HHHHHHHHHHhhcccc-ccchhhHHH-HHHHHHHHHHHHHH
Confidence            222211  111111222222   1222  2334455556667766 888888776 55554444444433

>4aps_A DI-OR tripeptide H+ symporter; transport protein, peptide transport, major facilitator SUPE transporter, MFS; 3.30A {Streptococcus thermophilus}

Probab=99.67  E-value=1.2e-13  Score=140.63  Aligned_cols=352  Identities=12%  Similarity=0.024  Sum_probs=188.7

Q ss_pred             hHHHHHHhhhhhcchhcc-CCcHHHHHHHHHHHHHHHHHHHHHHHHHhccccccccchhHHHHHHHHHHHHHHHHHhhhh
Q 015168            5 SKLILIVGGPLVGKLMDH-SPRIPAYICLNTVQAAAQLLSAAMIIHAHTVIPTSSSMLLHPWFFVLVLAGAVERLTGVAL   83 (412)
Q Consensus         5 ~~lp~ll~g~~~G~~vDr-~~R~~v~~~~~~~q~~~v~~s~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~l~~~a~   83 (412)
                      ..+...+..++.|.+.|| ++||+++..+.+...+.    +.  ...+...      . +.+++..++.|..........
T Consensus        63 ~~~~~~~~~~~~g~l~dr~~g~r~~~~~~~~~~~~~----~~--~~~~~~~------~-~~~~~~~~l~g~~~~~~~~~~  129 (491)
T 4aps_A           63 YASMVYLSGTIGGFVADRIIGARPAVFWGGVLIMLG----HI--VLALPFG------A-SALFGSIILIIIGTGFLKPNV  129 (491)
T ss_dssp             HHHHHHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHH----HH--HHHSCCS------T-THHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHhccccchHHHHHHHHHHHHH----HH--HHHHhhh------H-HHHHHHHHHHHHHHHhccchH
Confidence            456778889999999999 89999998886644332    21  2222211      1 234444455555555444433


Q ss_pred             hhhhcccceeeecCCCchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhcChhHHHHHHHHHHHHHHHHHHHHHHHhhhc
Q 015168           84 GVAVERDWAVLLAGINRPIALAKANAVLNRIDLLCEIAGASLFGILLSKYEPVTCLKFAAGLIMWSLPVMIILTWFTNKI  163 (412)
Q Consensus        84 ~~ai~RDwv~~l~~~~~~~~L~~~Ns~l~~id~v~~llgP~lgG~L~~~~~~~~~~~~~~~~~~~s~~~~~~~l~~~~~~  163 (412)
                       .++..|    .++++++ ...+.++.......++.++||.++|.+.+..+|+..+++.+...+++.....   ....+.
T Consensus       130 -~~~~~~----~~~~~~~-~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~g~~~~f~~~~~~~~~~~~~~~---~~~~~~  200 (491)
T 4aps_A          130 -STLVGT----LYDEHDR-RRDAGFSIFVFGINLGAFIAPLIVGAAQEAAGYHVAFSLAAIGMFIGLLVYY---FGGKKT  200 (491)
T ss_dssp             -HHHHHH----HSSSCTT-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHHH---HHHHTT
T ss_pred             -HHHHHH----HcCcccc-cceeeehHHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHH---HhCccc
Confidence             333445    5554422 4677888888999999999999999999999999988765444444332211   111111


Q ss_pred             cccccccccccccccCCCCCCCCCCchhhhHHhHHH-------------------------------------H----HH
Q 015168          164 SSGVLDRAKCSQSCCRTSNEGPVPDADNIVDVGIEA-------------------------------------I----KL  202 (412)
Q Consensus       164 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------------------------------~----~~  202 (412)
                      .+   ++.++.  +       ++.+.++ .++..+.                                     .    .+
T Consensus       201 ~~---~~~~~~--~-------~~~~~~~-~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  267 (491)
T 4aps_A          201 LD---PHYLRP--T-------DPLAPEE-VKPLLVKVSLAVAGFIAIIVVMNLVGWNSLPAYINLLTIVAIAIPVFYFAW  267 (491)
T ss_dssp             CC---SCCSCC--S-------CCCSHHH-HHHHHHHCCCCCHHHHHHHHHHHHHSSCCTTHHHHHHHHHHHHHHHHHHHH
T ss_pred             cc---ccccCC--C-------Cccccch-hHHHHHHHHHHHHHHHHHHHHHHhccCcccccchhhhhHHHHHHHHHHHHH
Confidence            10   000000  0       0000000 0000000                                     0    00


Q ss_pred             hHHH-----HhcCC--cchHHHHHHHHHHHhhhccchHHHHHHHh-cCCCCchhHHHhhHHHHHHHHHHHHHHHHHHHhc
Q 015168          203 GWKE-----YMQQP--VLPASLAYVLLCLNVVLTPGSLMTAFLTQ-RGLNPSIIGGFSGLCASMGVAATFLSAYLVRRLG  274 (412)
Q Consensus       203 g~~~-----~~~~~--v~~~~~~~a~l~~t~v~~~~~~~~~y~~~-~gls~~~~G~~~~~~avggllGt~l~~~l~~R~g  274 (412)
                      -|+.     ..+++  .+........++...........+.|..+ .+.+....|...+..+++.+.++.+.+++.+|+|
T Consensus       268 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~r~~  347 (491)
T 4aps_A          268 MISSVKVTSTEHLRVVSYIPLFIAAVLFWAIEEQGSVVLATFAAERVDSSWFPVSWFQSLNPLFIMLYTPFFAWLWTAWK  347 (491)
T ss_dssp             HC------------CTTHHHHHHHHHHHHHHHGGGGTHHHHHHHHSCCCSSSCSGGGTTHHHHHHHHHHHHHHHHHHHTT
T ss_pred             HhhcccccHHHHHHHHHHHHHHHHHHHHHHHHhhccHHHHHHHHHHhccCccCHHHHhccchHHHHHHHHHHHHHHHHHh
Confidence            0111     01111  12222222222211123344456667765 7888788999999999999999999999999999


Q ss_pred             hhhHHH-----HHHHHHHHHHHHHHH-HHhcCCCcCcchHHHHHHHHHHhhhhhhhhhhhhhHHhhccCCcccchhHHHH
Q 015168          275 ILKAGA-----AGLIFQASLLAMAVA-VYWSGSLSQQNPLLFFLCLIVLSRLGHMSYDIVGAQILQTGIPSSKANLIGTT  348 (412)
Q Consensus       275 ~~r~~~-----~~~~~~~~~l~~~v~-~~~~g~~~~~~~~~l~~~g~~~sr~GLw~~dl~~~~l~Q~~vp~~~~G~v~g~  348 (412)
                      +++...     ++.....++...... ....+.... ........+.++..+|..........+.++..|+++||++.|+
T Consensus       348 ~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~p~~~~g~~~g~  426 (491)
T 4aps_A          348 KNQPSSPTKFAVGLMFAGLSFLLMAIPGALYGTSGK-VSPLWLVGSWALVILGEMLISPVGLSVTTKLAPKAFNSQMMSM  426 (491)
T ss_dssp             TC---CHHHHHHHHHHHHHHHTTTHHHHHHCCCCTT-CCTHHHHHHHHHHHHHHHTTTTHHHHHHHHHTTTTCSSSSTHH
T ss_pred             ccCCCchHHHHHHHHHHHHHHHHHHHHHHhcCCCCC-ccHHHHHHHHHHHHHHHHHHhHHHHHHHHHhCCHHHHHHHHHH
Confidence            864432     333222211111111 111110000 1111111222233334433445667789999999999999999


Q ss_pred             HHHHHHHHHHHHHHHHHhccCCCchhHHHHHHHHHHHHHHHHHH
Q 015168          349 EISVASLVESVMLGVAIIANDVSHFGFLATLSLLSVVGAAWMFC  392 (412)
Q Consensus       349 ~~sl~~~~~ll~~~~~~~~~~~~~f~~l~~~s~~~v~~~~~~~~  392 (412)
                      .+..++....+...+.....+..........+..++.++...+.
T Consensus       427 ~~~~~~~g~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  470 (491)
T 4aps_A          427 WFLSSSVGSALNAQLVTLYNAKSEVAYFSYFGLGSVVLGIVLVF  470 (491)
T ss_dssp             HHHHHHHHHHHHHHHGGGGGGSSTTHHHHHTHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHH
Confidence            99999987777777766666655444444445444555444444

>2gfp_A EMRD, multidrug resistance protein D; membrane protein, multidrug transporter; 3.50A {Escherichia coli}

Probab=99.64  E-value=7.5e-17  Score=158.55  Aligned_cols=317  Identities=14%  Similarity=0.078  Sum_probs=183.4

Q ss_pred             hhHHHHHHhhhhhcchhccCCcHHHHHHHHHHHHHHHHHHHHHHHHHhccccccccchhHHHHHHHHHHHHHHHHHhhhh
Q 015168            4 FSKLILIVGGPLVGKLMDHSPRIPAYICLNTVQAAAQLLSAAMIIHAHTVIPTSSSMLLHPWFFVLVLAGAVERLTGVAL   83 (412)
Q Consensus         4 ~~~lp~ll~g~~~G~~vDr~~R~~v~~~~~~~q~~~v~~s~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~l~~~a~   83 (412)
                      +..++..+.+++.|.+.||++|||++..+.+...+...+      .....       ..+.+++..++.|..........
T Consensus        43 ~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~------~~~~~-------~~~~l~~~~~l~g~~~~~~~~~~  109 (375)
T 2gfp_A           43 AYLLTYGVSQLFYGPISDRVGRRPVILVGMSIFMLATLV------AVTTS-------SLTVLIAASAMQGMGTGVGGVMA  109 (375)
T ss_dssp             HHHHHHHHHHTTHHHHHTTSCCCCCCHHHHHHHHHHHHH------HHHHH-------HHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHhCCchhHHHHHHHHHHHHHH------HHHhc-------cHHHHHHHHHHHHHHHHhhhhhH
Confidence            346778899999999999999999988887655433221      11111       11234444455566555555444


Q ss_pred             hhhhcccceeeecCCCchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhcChhHHHHHHHHHHHHHHHHHHHHHHHhhhc
Q 015168           84 GVAVERDWAVLLAGINRPIALAKANAVLNRIDLLCEIAGASLFGILLSKYEPVTCLKFAAGLIMWSLPVMIILTWFTNKI  163 (412)
Q Consensus        84 ~~ai~RDwv~~l~~~~~~~~L~~~Ns~l~~id~v~~llgP~lgG~L~~~~~~~~~~~~~~~~~~~s~~~~~~~l~~~~~~  163 (412)
                      .. +..|    .++++   +..+.++..+....++.++||.++|.+.+..+|+..+++.+....+..      ......+
T Consensus       110 ~~-~~~~----~~~~~---~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~------~~~~~~~  175 (375)
T 2gfp_A          110 RT-LPRD----LYERT---QLRHANSLLNMGILVSPLLAPLIGGLLDTMWNWRACYLFLLVLCAGVT------FSMARWM  175 (375)
T ss_dssp             HH-HHHH----HHHTS---SCCSHHHHHHHHHHHHHHHHHHHHHHSSCHHHHHHHHHHHHHHHHHHH------CCCCCSS
T ss_pred             HH-HHHH----HCCHH---HHHHHHHHHHHHHHHHHHhhHHHHHHHHHhccHHHHHHHHHHHHHHHH------HHHHHHC
Confidence            33 2334    45543   678899999999999999999999999998899988765443333322      1112233


Q ss_pred             cccccccccccccccCCCCCCCCCCchhhhHHhHHHHHHhHHHHhcCCcchHHHHHHHHH-HHhhhccchHHHHHHHh-c
Q 015168          164 SSGVLDRAKCSQSCCRTSNEGPVPDADNIVDVGIEAIKLGWKEYMQQPVLPASLAYVLLC-LNVVLTPGSLMTAFLTQ-R  241 (412)
Q Consensus       164 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~v~~~~~~~a~l~-~t~v~~~~~~~~~y~~~-~  241 (412)
                      ||+..  ++++     +      ++           ..++++..+|+|.++.......++ .. ...+....+.|.++ +
T Consensus       176 ~~~~~--~~~~-----~------~~-----------~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~  230 (375)
T 2gfp_A          176 PETRP--VDAP-----R------TR-----------LLTSYKTLFGNSGFNCYLLMLIGGLAG-IAAFEACSGVLMGAVL  230 (375)
T ss_dssp             CCCST--TTCC-----C------CC-----------TTTCSTHHHHHHHHHHHHHHHHHHHHH-HHHHHHHCSCSSHHHH
T ss_pred             cccCC--CCcc-----c------cc-----------HHHHHHHHhcCcchHHHHHHHHHHHHH-HHHHHHHHHHHHHHHh
Confidence            43111  0000     0      00           012344556666666543333332 22 12223333445555 7


Q ss_pred             CCCCchhHHHhhHHHHHHHHHHHHHHHHHHHhchhhHHHHHHHH-HHHHHHHHHHHHhcCCCcCcchHHHHHHHHHHhhh
Q 015168          242 GLNPSIIGGFSGLCASMGVAATFLSAYLVRRLGILKAGAAGLIF-QASLLAMAVAVYWSGSLSQQNPLLFFLCLIVLSRL  320 (412)
Q Consensus       242 gls~~~~G~~~~~~avggllGt~l~~~l~~R~g~~r~~~~~~~~-~~~~l~~~v~~~~~g~~~~~~~~~l~~~g~~~sr~  320 (412)
                      |.++...|.+.+..+++++++..+.+++.+|.|. +. ..+... ...............     .....+..+.++..+
T Consensus       231 g~~~~~~g~~~~~~~~~~~~~~~~~~~l~~r~~~-~~-~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~l~g~  303 (375)
T 2gfp_A          231 GLSSMTVSILFILPIPAAFFGAWFAGRPNKRFST-LM-WQSVICCLLAGLLMWIPDWFGV-----MNVWTLLVPAALFFF  303 (375)
T ss_dssp             HHHHHHHHHHHHTHHHHHHHHHHHHHTTTTHHHH-HH-HHHHHHHHHTSSSSSHHHHHHH-----HHHHHHHHHHHHHHH
T ss_pred             CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HH-HHHHHHHHHHHHHHHHHhhhcc-----ccHHHHHHHHHHHHH
Confidence            9999999999999999999999999999999987 22 222211 000000000010000     011111112222233


Q ss_pred             hhhhhhhhhhHHhhccCCcccchhHHHHHHHHHHHHHHHHHHHHHhccCCCchhHHHHHH
Q 015168          321 GHMSYDIVGAQILQTGIPSSKANLIGTTEISVASLVESVMLGVAIIANDVSHFGFLATLS  380 (412)
Q Consensus       321 GLw~~dl~~~~l~Q~~vp~~~~G~v~g~~~sl~~~~~ll~~~~~~~~~~~~~f~~l~~~s  380 (412)
                      +.-........+.|+..| ++||+++|..++.++....+...+.....+...+.....+.
T Consensus       304 ~~~~~~~~~~~~~~~~~p-~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~~~~~~~~~~  362 (375)
T 2gfp_A          304 GAGMLFPLATSGAMEPFP-FLAGTAGALVGGLQNIGSGVLASLSAMLPQTGQGSLGLLMT  362 (375)
T ss_dssp             HHHHTSSTTHHHHHTHHH-HHHHHHHHHHHHHHHHHHHCCSTTCTHHHHHHHHHHHHHHH
T ss_pred             HHHHhhHHHHHHHHHhCC-cccchHHHHHHHHHHHHHHHHHHHHHHHhcCCcccHHHHHH
Confidence            443455677777888887 89999999999998876665555544444444444444443

>2cfq_A Lactose permease; transport, transport mechanism, lactose/H+ symport, sugar transport, transmembrane, formylation; 2.95A {Escherichia coli} SCOP: f.38.1.2 PDB: 1pv7_A* 1pv6_A 2cfp_A 2v8n_A 2y5y_A*

Probab=99.37  E-value=3.7e-12  Score=127.70  Aligned_cols=229  Identities=12%  Similarity=0.008  Sum_probs=117.1

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhhcChhHHHHHHHHHHHHHHHHHHHHHHHhhhccccccccccccccccCCCCCCCCC
Q 015168          108 NAVLNRIDLLCEIAGASLFGILLSKYEPVTCLKFAAGLIMWSLPVMIILTWFTNKISSGVLDRAKCSQSCCRTSNEGPVP  187 (412)
Q Consensus       108 Ns~l~~id~v~~llgP~lgG~L~~~~~~~~~~~~~~~~~~~s~~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~  187 (412)
                      .+..+....++..++|.++|.+.. .+|+..+++.+....+..      . .....+|++++++++.  +.++ +  +.+
T Consensus       140 ~g~~~~~~~~g~~~~~~l~~~l~~-~~~~~~f~~~~~~~~~~~------~-~~~~~~~~~~~~~~~~--~~~~-~--~~~  206 (417)
T 2cfq_A          140 FGRARMFGCVGWALGASIVGIMFT-INNQFVFWLGSGCALILA------V-LLFFAKTDAPSSATVA--NAVG-A--NHS  206 (417)
T ss_dssp             HHHHSSSTTTHHHHHHHHHHHHHH-HCSHHHHTTTTTTTTTHH------H-HSCSSCCCCSCSSCSS--SSSS-S--CCC
T ss_pred             hHHHHHHHHHHHHHHHHHHHHHHH-hchhHHHHHHHHHHHHHH------H-HHHHcCcccccccccc--cccc-c--ccc
Confidence            345555567778899999999987 578876654322211111      1 1122222111110000  0000 0  000


Q ss_pred             CchhhhHHhHHHHHHhHHHHhcCCcchHHHHHHHHHHHhhhccchHHHHHHHh-cC---CCCchhHHHhhHHHHHHHHHH
Q 015168          188 DADNIVDVGIEAIKLGWKEYMQQPVLPASLAYVLLCLNVVLTPGSLMTAFLTQ-RG---LNPSIIGGFSGLCASMGVAAT  263 (412)
Q Consensus       188 ~~~~~~~~~~~~~~~g~~~~~~~~v~~~~~~~a~l~~t~v~~~~~~~~~y~~~-~g---ls~~~~G~~~~~~avggllGt  263 (412)
                      +      ..    .+.++..+++|.++........+......+......|..+ .+   .++..+|+..+.+.++.+++.
T Consensus       207 ~------~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~  276 (417)
T 2cfq_A          207 A------FS----LKLALELFRQPKLWFLSLYVIGVSCTYDVFDQQFANFFTSFFATGEQGTRVFGYVTTMGELLNASIM  276 (417)
T ss_dssp             C------CC----HHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSSSHHHHTHHHHHHHHHHHHHHHHHH
T ss_pred             c------cc----HHHHHHHhcCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCChhHHHHHHHHHHHHHHHHH
Confidence            0      00    1245567788877653332222110011122224455543 33   346678999999999999999


Q ss_pred             HHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHHhcCCCcCcchHHHHHHHHHHhhhhhhhhhhhhhHHhhccCCcccch
Q 015168          264 FLSAYLVRRLGILKAGAAGLIFQASLLAMAVAVYWSGSLSQQNPLLFFLCLIVLSRLGHMSYDIVGAQILQTGIPSSKAN  343 (412)
Q Consensus       264 ~l~~~l~~R~g~~r~~~~~~~~~~~~l~~~v~~~~~g~~~~~~~~~l~~~g~~~sr~GLw~~dl~~~~l~Q~~vp~~~~G  343 (412)
                      ++.+++.+|+|++|...++.....+...   ......+    ....+.  ...+..++.-.+......+..|..|++.||
T Consensus       277 ~~~g~l~dr~g~~~~l~~~~~~~~~~~~---~~~~~~~----~~~~~~--~~~l~~~~~~~~~~~~~~~~~~~~p~~~~g  347 (417)
T 2cfq_A          277 FFAPLIINRIGGKNALLLAGTIMSVRII---GSSFATS----ALEVVI--LKTLHMFEVPFLLVGCFKYITSQFEVRFSA  347 (417)
T ss_dssp             HHHHHHHHHHCHHHHHHHHHHHHHHHHH---HHTTCCS----HHHHHH--HTTHHHHHHHHHHHHHHHHHHHHSCHHHHH
T ss_pred             HHHHHHHHHhcHHHHHHHHHHHHHHHHH---HHHHhcc----HHHHHH--HHHHHHHHHHHHHHHHHHHHHHHCCHHHHH
Confidence            9999999999998887765543222111   1111111    111111  111111111112334456788888999999


Q ss_pred             hHHHH-HHHHHHHHHHHHHHHHHhcc
Q 015168          344 LIGTT-EISVASLVESVMLGVAIIAN  368 (412)
Q Consensus       344 ~v~g~-~~sl~~~~~ll~~~~~~~~~  368 (412)
                      +..+. +++.+.....+...++....
T Consensus       348 ~~~g~~~~~~~~lg~~~gp~l~G~l~  373 (417)
T 2cfq_A          348 TIYLVCFCFFKQLAMIFMSVLAGNMY  373 (417)
T ss_dssp             HHHHHHHTTTHHHHHHHHTHHHHTHH
T ss_pred             HHHHHHHHHHHhHHHHHhhhhHHHHH
Confidence            99888 47776665555555544433

>2xut_A Proton/peptide symporter family protein; transport protein, membrane protein, major facilitator super transporter; 3.62A {Shewanella oneidensis}

Probab=99.25  E-value=5.7e-10  Score=114.29  Aligned_cols=126  Identities=11%  Similarity=0.009  Sum_probs=80.0

Q ss_pred             hHHHHHHhhhhhcchhccC-CcHHHHHHHHHHHHHHHHHHHHHHHHHhccccccccchhHHHHHHHHHHHHHHHHHhhhh
Q 015168            5 SKLILIVGGPLVGKLMDHS-PRIPAYICLNTVQAAAQLLSAAMIIHAHTVIPTSSSMLLHPWFFVLVLAGAVERLTGVAL   83 (412)
Q Consensus         5 ~~lp~ll~g~~~G~~vDr~-~R~~v~~~~~~~q~~~v~~s~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~l~~~a~   83 (412)
                      ..+..++..++.|.+.||+ +||+++..+.+...+.    ..  ...+....     . +.+++..++.|........+.
T Consensus        63 ~~~~~~~~~~~~G~l~dr~~g~r~~~~~~~~~~~~~----~~--~~~~~~~~-----~-~~~~~~~~l~g~~~~~~~~~~  130 (524)
T 2xut_A           63 FVIGVYFFPLLGGWIADRFFGKYNTILWLSLIYCVG----HA--FLAIFEHS-----V-QGFYTGLFLIALGSGGIKPLV  130 (524)
T ss_dssp             HHHHHHHTHHHHHHHHTTSSCSHHHHHHHHHHHHHH----HH--HHHHTSSC-----H-HHHHHHHHHHHHHHHTTHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHH----HH--HHHHhccc-----H-HHHHHHHHHHHHhccccchhH
Confidence            4567788899999999999 9999988876544332    11  11122101     1 234444555666655554444


Q ss_pred             hhhhcccceeeecCCCchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhcChhHHHHHHHHHHH
Q 015168           84 GVAVERDWAVLLAGINRPIALAKANAVLNRIDLLCEIAGASLFGILLSKYEPVTCLKFAAGLIM  147 (412)
Q Consensus        84 ~~ai~RDwv~~l~~~~~~~~L~~~Ns~l~~id~v~~llgP~lgG~L~~~~~~~~~~~~~~~~~~  147 (412)
                      .. +..|    .+++++.......++.......++.++||.++|.+.+..+|+..+++.+...+
T Consensus       131 ~~-~~~~----~~~~~~r~~~~~~~~~~~~~~~~g~~~g~~~~~~l~~~~g~~~~f~~~~~~~~  189 (524)
T 2xut_A          131 SS-FMGD----QFDQSNKSLAQKAFDMFYFTINFGSFFASLSMPLLLKNFGAAVAFGIPGVLMF  189 (524)
T ss_dssp             HH-HHHH----TCSTTTTTHHHHHHHHHHHHHHHHHHHHHHTSTHHHHTSCHHHHHHHHHHHHH
T ss_pred             HH-HHHH----HcCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccHHHHHHHHHHHHH
Confidence            33 2334    45543211345555668888899999999999999998999988876544433

>4gc0_A D-xylose-proton symporter; MFS, transport protein; HET: 6BG BNG; 2.60A {Escherichia coli} PDB: 4gbz_A* 4gby_A*

Probab=98.98  E-value=2.2e-07  Score=93.96  Aligned_cols=119  Identities=13%  Similarity=0.085  Sum_probs=75.4

Q ss_pred             HhcCCCCchhHHHhhHHHHHHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHHhcCCCcCcchHHHHHHHHHHh
Q 015168          239 TQRGLNPSIIGGFSGLCASMGVAATFLSAYLVRRLGILKAGAAGLIFQASLLAMAVAVYWSGSLSQQNPLLFFLCLIVLS  318 (412)
Q Consensus       239 ~~~gls~~~~G~~~~~~avggllGt~l~~~l~~R~g~~r~~~~~~~~~~~~l~~~v~~~~~g~~~~~~~~~l~~~g~~~s  318 (412)
                      +..+.+...........++..+.++++..++.+|+|+++....+.....+++............. .......  .+...
T Consensus       305 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~dr~Grr~~~~~~~~~~~~~~~~l~~~~~~~~~~-~~~~~~~--~~~~~  381 (491)
T 4gc0_A          305 KTLGASTDIALLQTIIVGVINLTFTVLAIMTVDKFGRKPLQIIGALGMAIGMFSLGTAFYTQAPG-IVALLSM--LFYVA  381 (491)
T ss_dssp             HHSSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCSHHHHHHHHHHHHHHHHHHHHHHHTTCCH-HHHHHHH--HHHHH
T ss_pred             HhcCCCccchhhHHHHHHHHHHHHHHHHHHHHHhhcCcchhccchHHHHHHHHHHHHHHhcccch-HHHHHHH--HHHHH
Confidence            35688877777777888899999999999999999999988777665444333222222222211 1111111  11111


Q ss_pred             hhhhhhhhhhhhHHhhccCCcccchhHHHHHHHHHHHHHHHHH
Q 015168          319 RLGHMSYDIVGAQILQTGIPSSKANLIGTTEISVASLVESVML  361 (412)
Q Consensus       319 r~GLw~~dl~~~~l~Q~~vp~~~~G~v~g~~~sl~~~~~ll~~  361 (412)
                      .++. .+......+..|..|.+.|++..|+..+.++....+..
T Consensus       382 ~~~~-~~~~~~~~~~~E~fPt~~R~~~~g~~~~~~~~~~~i~~  423 (491)
T 4gc0_A          382 AFAM-SWGPVCWVLLSEIFPNAIRGKALAIAVAAQWLANYFVS  423 (491)
T ss_dssp             HHHT-TTTHHHHHHHHHSSCTTTHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHh-HHHHHHHHHHHHhCCHhHHHHHHHHHHHHHHHHHHHHH
Confidence            1122 22233345677888999999999999999988665544

>3o7q_A L-fucose-proton symporter; transporter, multi-PASS membrane protei transport protein; HET: BNG; 3.14A {Escherichia coli} PDB: 3o7p_A*

Probab=98.43  E-value=2.7e-05  Score=77.01  Aligned_cols=129  Identities=12%  Similarity=0.017  Sum_probs=93.5

Q ss_pred             HHHHHHHhcCCCCchhHHHhhHHHHHHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHHhcCCCcCcchHHHHH
Q 015168          233 LMTAFLTQRGLNPSIIGGFSGLCASMGVAATFLSAYLVRRLGILKAGAAGLIFQASLLAMAVAVYWSGSLSQQNPLLFFL  312 (412)
Q Consensus       233 ~~~~y~~~~gls~~~~G~~~~~~avggllGt~l~~~l~~R~g~~r~~~~~~~~~~~~l~~~v~~~~~g~~~~~~~~~l~~  312 (412)
                      ..+.+.+++|+|+.+.|++.+...++..++....+++.+|+|++|...++.....+....+.......+      ...+.
T Consensus        48 ~~~~~~~~~g~s~~~~g~~~~~~~~~~~i~~~~~G~l~dr~g~r~~l~~~~~~~~~~~~~~~~~~~~~~------~~~l~  121 (438)
T 3o7q_A           48 LLPQFQQAFTLTNFQAGLIQSAFYFGYFIIPIPAGILMKKLSYKAGIITGLFLYALGAALFWPAAEIMN------YTLFL  121 (438)
T ss_dssp             HHHHHHHHSCCCSHHHHHHHHHHHHHHHTTHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHHHHHHHTTC------HHHHH
T ss_pred             HHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHhcchHHHHHHHHHHHHHHHHHHhcccccc------HHHHH
Confidence            344456679999999999999999999999999999999999999988877654433322211112111      12222


Q ss_pred             HHHHHhhhhhhhhhhhhhHHhhccCCcccchhHHHHHHHHHHHHHHHHHHHHHhc
Q 015168          313 CLIVLSRLGHMSYDIVGAQILQTGIPSSKANLIGTTEISVASLVESVMLGVAIIA  367 (412)
Q Consensus       313 ~g~~~sr~GLw~~dl~~~~l~Q~~vp~~~~G~v~g~~~sl~~~~~ll~~~~~~~~  367 (412)
                      .+-++.++|.-..+.+...+..|..|+++||++.+..++.......+...++...
T Consensus       122 ~~~~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l  176 (438)
T 3o7q_A          122 VGLFIIAAGLGCLETAANPFVTVLGPESSGHFRLNLAQTFNSFGAIIAVVFGQSL  176 (438)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHSSCSTTHHHHHHHHHHHHHHHHHHHHHHTTHH
T ss_pred             HHHHHHHhhHHHhhhhHHHHHHHHcCchhHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            2333445555557778888999999999999999999999988666666664433

>1pw4_A Glycerol-3-phosphate transporter; transmembrane, inner membrane, major facilitator superfamily, secondary active membrane transporter; 3.30A {Escherichia coli} SCOP: f.38.1.1

Probab=98.30  E-value=6.3e-06  Score=81.81  Aligned_cols=125  Identities=12%  Similarity=-0.022  Sum_probs=88.6

Q ss_pred             chHHHHHHHhcCCCCchhHHHhhHHHHHHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHHh---cCCCcCcch
Q 015168          231 GSLMTAFLTQRGLNPSIIGGFSGLCASMGVAATFLSAYLVRRLGILKAGAAGLIFQASLLAMAVAVYW---SGSLSQQNP  307 (412)
Q Consensus       231 ~~~~~~y~~~~gls~~~~G~~~~~~avggllGt~l~~~l~~R~g~~r~~~~~~~~~~~~l~~~v~~~~---~g~~~~~~~  307 (412)
                      ....+.|.++. +|+.++|++.+...++..++....+++.+|+|+++...++.....+....+  .+.   ..+    ..
T Consensus        48 ~~~~~~~~~~~-~s~~~~g~~~~~~~~~~~~~~~~~G~l~dr~g~r~~l~~~~~~~~~~~~~~--~~~~~~~~~----~~  120 (451)
T 1pw4_A           48 ALAMPYLVEQG-FSRGDLGFALSGISIAYGFSKFIMGSVSDRSNPRVFLPAGLILAAAVMLFM--GFVPWATSS----IA  120 (451)
T ss_dssp             HHHHHHTTSST-TCSSCHHHHHHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHH--HHCHHHHSS----SS
T ss_pred             HHHHHHHHHHh-ccHhHHHHHHHHHHHHHHHHHHhHHHHHHhcCchHHHHHHHHHHHHHHHHH--Hhhhhcccc----HH
Confidence            33445555678 999999999999999999999999999999999999888776544333322  220   111    11


Q ss_pred             HHHHHHHHHHhhhhhhhhhhhhhHHhhccCCcccchhHHHHHHHHHHHHHHHHHHHH
Q 015168          308 LLFFLCLIVLSRLGHMSYDIVGAQILQTGIPSSKANLIGTTEISVASLVESVMLGVA  364 (412)
Q Consensus       308 ~~l~~~g~~~sr~GLw~~dl~~~~l~Q~~vp~~~~G~v~g~~~sl~~~~~ll~~~~~  364 (412)
                      .++  .+-++.++|.-....+...+..+..|+++||++++..++.......+...++
T Consensus       121 ~l~--~~~~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~  175 (451)
T 1pw4_A          121 VMF--VLLFLCGWFQGMGWPPCGRTMVHWWSQKERGGIVSVWNCAHNVGGGIPPLLF  175 (451)
T ss_dssp             HHH--HHHHHHHHHHHHTHHHHHHHHHTTCTTTHHHHHHHHHHHHHHHHHTSHHHHH
T ss_pred             HHH--HHHHHHHHHhhhccchHHHHHHHHCCchhhhHHHHHHHHHHHHHHHHHHHHH
Confidence            111  1222334444446678888999999999999999999988887655555554

>2gfp_A EMRD, multidrug resistance protein D; membrane protein, multidrug transporter; 3.50A {Escherichia coli}

Probab=98.26  E-value=5.7e-06  Score=80.42  Aligned_cols=130  Identities=7%  Similarity=-0.001  Sum_probs=94.6

Q ss_pred             hHHHHHHHhcCCCCchhHHHhhHHHHHHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHHhcCCCcCcchHHHH
Q 015168          232 SLMTAFLTQRGLNPSIIGGFSGLCASMGVAATFLSAYLVRRLGILKAGAAGLIFQASLLAMAVAVYWSGSLSQQNPLLFF  311 (412)
Q Consensus       232 ~~~~~y~~~~gls~~~~G~~~~~~avggllGt~l~~~l~~R~g~~r~~~~~~~~~~~~l~~~v~~~~~g~~~~~~~~~l~  311 (412)
                      ...+.|.+++|.|+.+.|++.+...++..++....+++.+|+|++|...++.....+.....  .+.+       ....+
T Consensus        21 ~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~--~~~~-------~~~~l   91 (375)
T 2gfp_A           21 PAIADMARDLNVREGAVQSVMGAYLLTYGVSQLFYGPISDRVGRRPVILVGMSIFMLATLVA--VTTS-------SLTVL   91 (375)
T ss_dssp             HHHHHHHTTSSSTTHHHHHHHHHHHHHHHHHHTTHHHHHTTSCCCCCCHHHHHHHHHHHHHH--HHHH-------HHHHH
T ss_pred             hhhHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchhHHHHHHHHHHHHHHH--HHhc-------cHHHH
Confidence            34455667899999999999999999999999999999999999999887776544332222  1111       11112


Q ss_pred             HHHHHHhhhhhhhhhhhhhHHhhccCCcccchhHHHHHHHHHHHHHHHHHHHHHhccCC
Q 015168          312 LCLIVLSRLGHMSYDIVGAQILQTGIPSSKANLIGTTEISVASLVESVMLGVAIIANDV  370 (412)
Q Consensus       312 ~~g~~~sr~GLw~~dl~~~~l~Q~~vp~~~~G~v~g~~~sl~~~~~ll~~~~~~~~~~~  370 (412)
                      ..+.++.+++.-.+......+..|..|+++|+++++..+........+...++....+.
T Consensus        92 ~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~  150 (375)
T 2gfp_A           92 IAASAMQGMGTGVGGVMARTLPRDLYERTQLRHANSLLNMGILVSPLLAPLIGGLLDTM  150 (375)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHTSSCCSHHHHHHHHHHHHHHHHHHHHHHSSCH
T ss_pred             HHHHHHHHHHHHhhhhhHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHh
Confidence            12233334444446677888888989999999999999999998777777776666543

>4aps_A DI-OR tripeptide H+ symporter; transport protein, peptide transport, major facilitator SUPE transporter, MFS; 3.30A {Streptococcus thermophilus}

Probab=98.26  E-value=3.7e-05  Score=77.52  Aligned_cols=140  Identities=11%  Similarity=0.034  Sum_probs=92.4

Q ss_pred             hHHHHHHH-h-----cCCCCchhHHHhhHHHHHHHHHHHHHHHHHHH-hchhhHHHHHHHHHHHHHHHHHHHHhcCCCcC
Q 015168          232 SLMTAFLT-Q-----RGLNPSIIGGFSGLCASMGVAATFLSAYLVRR-LGILKAGAAGLIFQASLLAMAVAVYWSGSLSQ  304 (412)
Q Consensus       232 ~~~~~y~~-~-----~gls~~~~G~~~~~~avggllGt~l~~~l~~R-~g~~r~~~~~~~~~~~~l~~~v~~~~~g~~~~  304 (412)
                      .....|+. +     +|+|+.+.|++.+...++..++..+.+++.+| +|++++..++.....+....   .....+   
T Consensus        34 ~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~g~r~~~~~~~~~~~~~~~~---~~~~~~---  107 (491)
T 4aps_A           34 AILLYYMWFLISTGDLHITRATAASIMAIYASMVYLSGTIGGFVADRIIGARPAVFWGGVLIMLGHIV---LALPFG---  107 (491)
T ss_dssp             HHHHHHHHHHHHHTSCCSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHHHHH---HHSCCS---
T ss_pred             HHHHHHHHhccchhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhccccchHHHHHHHHHHHHHHHH---HHHhhh---
Confidence            34667775 4     89999999999999999999999999999999 89999988776643332222   222211   


Q ss_pred             cchHHHHHHHHHHhhhhhhhhhhhhhHHhhccCCccc--chhHHHHHHHHHHHHHHHHHHHHHhccCCCchhHHHHHH
Q 015168          305 QNPLLFFLCLIVLSRLGHMSYDIVGAQILQTGIPSSK--ANLIGTTEISVASLVESVMLGVAIIANDVSHFGFLATLS  380 (412)
Q Consensus       305 ~~~~~l~~~g~~~sr~GLw~~dl~~~~l~Q~~vp~~~--~G~v~g~~~sl~~~~~ll~~~~~~~~~~~~~f~~l~~~s  380 (412)
                       ...++  .+.++.++|......+...+..+..|+++  ||+..+..++..+....+...++....+...+.....+.
T Consensus       108 -~~~~~--~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~g~~~~f~~~  182 (491)
T 4aps_A          108 -ASALF--GSIILIIIGTGFLKPNVSTLVGTLYDEHDRRRDAGFSIFVFGINLGAFIAPLIVGAAQEAAGYHVAFSLA  182 (491)
T ss_dssp             -TTHHH--HHHHHHHHHHHHHHHHHHHHHHHHSSSCTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCHHHHHHHH
T ss_pred             -HHHHH--HHHHHHHHHHHhccchHHHHHHHHcCcccccceeeehHHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHH
Confidence             11111  12223344444466677788888889988  666777777777776666655555444333344433333

>2xut_A Proton/peptide symporter family protein; transport protein, membrane protein, major facilitator super transporter; 3.62A {Shewanella oneidensis}

Probab=98.14  E-value=8.2e-05  Score=75.67  Aligned_cols=128  Identities=12%  Similarity=0.003  Sum_probs=85.4

Q ss_pred             hHHHHHHH-hcC------CCCchhHHHhhHHHHHHHHHHHHHHHHHHHh-chhhHHHHHHHHHHHHHHHHHHHHhcCCCc
Q 015168          232 SLMTAFLT-QRG------LNPSIIGGFSGLCASMGVAATFLSAYLVRRL-GILKAGAAGLIFQASLLAMAVAVYWSGSLS  303 (412)
Q Consensus       232 ~~~~~y~~-~~g------ls~~~~G~~~~~~avggllGt~l~~~l~~R~-g~~r~~~~~~~~~~~~l~~~v~~~~~g~~~  303 (412)
                      .....|+. ++|      +|+.+.|++.+...++.+++....+++.+|+ |++|+..++.....+.....  .+...+  
T Consensus        33 ~~l~~~l~~~~~~~~~~~~s~~~~g~~~~~~~~~~~~~~~~~G~l~dr~~g~r~~~~~~~~~~~~~~~~~--~~~~~~--  108 (524)
T 2xut_A           33 NILTPFLMTALLLSIPEELRGAVAKDVFHSFVIGVYFFPLLGGWIADRFFGKYNTILWLSLIYCVGHAFL--AIFEHS--  108 (524)
T ss_dssp             HHHHHHHHHSCSSCCSSSTTTTTHHHHHHHHHHHHHHTHHHHHHHHTTSSCSHHHHHHHHHHHHHHHHHH--HHTSSC--
T ss_pred             HHHHHHHHHHhccccccccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHH--HHhccc--
Confidence            34566765 578      9999999999999999999999999999999 99998887765433222221  222101  


Q ss_pred             CcchHHHHHHHHHHhhhhhhhhhhhhhHHhhccCCcccchhHHHH---HHHHHHHHHHHHHHHHHhc
Q 015168          304 QQNPLLFFLCLIVLSRLGHMSYDIVGAQILQTGIPSSKANLIGTT---EISVASLVESVMLGVAIIA  367 (412)
Q Consensus       304 ~~~~~~l~~~g~~~sr~GLw~~dl~~~~l~Q~~vp~~~~G~v~g~---~~sl~~~~~ll~~~~~~~~  367 (412)
                        ..  .+..+.++.++|.-....+...+..+..|+++||+.++.   .++..+....+...++...
T Consensus       109 --~~--~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~g~~~g~~~~~~l  171 (524)
T 2xut_A          109 --VQ--GFYTGLFLIALGSGGIKPLVSSFMGDQFDQSNKSLAQKAFDMFYFTINFGSFFASLSMPLL  171 (524)
T ss_dssp             --HH--HHHHHHHHHHHHHHTTHHHHHHHHHHTCSTTTTTHHHHHHHHHHHHHHHHHHHHHHTSTHH
T ss_pred             --HH--HHHHHHHHHHHhccccchhHHHHHHHHcCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence              11  111222333444444667778888999999999988777   6666665555555444333

>4gc0_A D-xylose-proton symporter; MFS, transport protein; HET: 6BG BNG; 2.60A {Escherichia coli} PDB: 4gbz_A* 4gby_A*

Probab=97.21  E-value=0.0051  Score=61.49  Aligned_cols=124  Identities=8%  Similarity=-0.036  Sum_probs=80.8

Q ss_pred             CCchhHHHhhHHHHHHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHH-hcC--CC--c----CcchHHHHHHH
Q 015168          244 NPSIIGGFSGLCASMGVAATFLSAYLVRRLGILKAGAAGLIFQASLLAMAVAVY-WSG--SL--S----QQNPLLFFLCL  314 (412)
Q Consensus       244 s~~~~G~~~~~~avggllGt~l~~~l~~R~g~~r~~~~~~~~~~~~l~~~v~~~-~~g--~~--~----~~~~~~l~~~g  314 (412)
                      ++...|++.+..-+|.++|+++.+++.+|+|++++..++.....+..+.+.... ...  ..  .    .......+..+
T Consensus        53 ~~~~~g~~~s~~~~G~~iG~~~~G~laDr~GRk~~l~~~~~l~~i~~i~~a~~~~~~~~~~~~~~~~~~~a~~~~~l~~~  132 (491)
T 4gc0_A           53 ANSLLGFCVASALIGCIIGGALGGYCSNRFGRRDSLKIAAVLFFISGVGSAWPELGFTSINPDNTVPVYLAGYVPEFVIY  132 (491)
T ss_dssp             HHHHHHHHHHTHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHHCTTTTTSCSSSSSSCCGGGGGCHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHhhhhhhhcchhHHHHHHhhhHHHHHHH
Confidence            345678888999999999999999999999999999888765444333321100 000  00  0    00112223334


Q ss_pred             HHHhhhhhhhhhhhhhHHhhccCCcccchhHHHHHHHHHHHHHHHHHHHHHhc
Q 015168          315 IVLSRLGHMSYDIVGAQILQTGIPSSKANLIGTTEISVASLVESVMLGVAIIA  367 (412)
Q Consensus       315 ~~~sr~GLw~~dl~~~~l~Q~~vp~~~~G~v~g~~~sl~~~~~ll~~~~~~~~  367 (412)
                      =++.++|.-..-.....+..|..|+++||+..+..........++.+......
T Consensus       133 R~l~G~g~G~~~~~~~~~i~E~~p~~~rg~~~~~~~~~~~~g~~~~~~~~~~~  185 (491)
T 4gc0_A          133 RIIGGIGVGLASMLSPMYIAELAPAHIRGKLVSFNQFAIIFGQLLVYCVNYFI  185 (491)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHTTSCGGGHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHhhCCHHhhhhhHHhhhhhhhhhhhhhhhcchhh
Confidence            33444455445566777889999999999999998887776666555554443

>2cfq_A Lactose permease; transport, transport mechanism, lactose/H+ symport, sugar transport, transmembrane, formylation; 2.95A {Escherichia coli} SCOP: f.38.1.2 PDB: 1pv7_A* 1pv6_A 2cfp_A 2v8n_A 2y5y_A*

Probab=96.47  E-value=0.00097  Score=66.06  Aligned_cols=79  Identities=11%  Similarity=0.031  Sum_probs=59.5

Q ss_pred             HhcCCcchHHHHHHHHHHHhhhccchHHHHHHHh-cCCCCchhHHHhhHHHHHHHHHHHHHHHHHHHhchhhHHHHHHHH
Q 015168          207 YMQQPVLPASLAYVLLCLNVVLTPGSLMTAFLTQ-RGLNPSIIGGFSGLCASMGVAATFLSAYLVRRLGILKAGAAGLIF  285 (412)
Q Consensus       207 ~~~~~v~~~~~~~a~l~~t~v~~~~~~~~~y~~~-~gls~~~~G~~~~~~avggllGt~l~~~l~~R~g~~r~~~~~~~~  285 (412)
                      ++|||.++.......+++..........+.|+++ +|+|+.+.|++.+...++..++..+.+++.+|+|++|...++...
T Consensus         3 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~s~~~~g~~~~~~~~~~~i~~~~~G~lsDr~Grr~~l~~~~~~   82 (417)
T 2cfq_A            3 YLKNTNFWMFGLFFFFYFFIMGAYFPFFPIWLHDINHISKSDTGIIFAAISLFSLLFQPLFGLLSDKLGLRKYLLWIITG   82 (417)
T ss_dssp             TTSCHHHHHHHHHHHHHHHHHHHHTTTHHHHHHTTTCCCTTTSHHHHHHHHHHHHHHHHHHHHHHTTSTTCCHHHHHHHH
T ss_pred             cccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHH
Confidence            5677777664443333321112234457788875 899999999999999999999999999999999999998876553

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	412
d1pw4a_	447	Glycerol-3-phosphate transporter {Escherichia coli	99.76
d1pv7a_	417	Lactose permease {Escherichia coli [TaxId: 562]}	99.52
d1pw4a_	447	Glycerol-3-phosphate transporter {Escherichia coli	98.43
d1pv7a_	417	Lactose permease {Escherichia coli [TaxId: 562]}	98.03

>d1pw4a_ f.38.1.1 (A:) Glycerol-3-phosphate transporter {Escherichia coli [TaxId: 562]}

class: Membrane and cell surface proteins and peptides
fold: MFS general substrate transporter
superfamily: MFS general substrate transporter
family: Glycerol-3-phosphate transporter
domain: Glycerol-3-phosphate transporter
species: Escherichia coli [TaxId: 562]

Probab=99.76  E-value=2.2e-16  Score=154.76  Aligned_cols=362  Identities=11%  Similarity=0.008  Sum_probs=196.1

Q ss_pred             hHHHHHHhhhhhcchhccCCcHHHHHHHHHHHHHHHHHHHHHHHHHhccccccccchhHHHHHHHHHHHHHHHHHhhhhh
Q 015168            5 SKLILIVGGPLVGKLMDHSPRIPAYICLNTVQAAAQLLSAAMIIHAHTVIPTSSSMLLHPWFFVLVLAGAVERLTGVALG   84 (412)
Q Consensus         5 ~~lp~ll~g~~~G~~vDr~~R~~v~~~~~~~q~~~v~~s~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~l~~~a~~   84 (412)
                      ..+...+..++.|.+.||++||+++..+.+...+...+..    +.....   +  ..+.+++.-++.|........+..
T Consensus        68 ~~~~~~~~~~~~G~l~Dr~g~r~~~~~~~~~~~~~~~~~~----~~~~~~---~--~~~~~~~~~~~~g~~~~~~~~~~~  138 (447)
T d1pw4a_          68 ISIAYGFSKFIMGSVSDRSNPRVFLPAGLILAAAVMLFMG----FVPWAT---S--SIAVMFVLLFLCGWFQGMGWPPCG  138 (447)
T ss_dssp             HHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHHH----HCHHHH---S--SSSHHHHHHHHHHHHHHHTHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHcCchHHHHHHHHHHHHHHhhcc----ccchhh---h--hHHHHHHHHHHHHHhhhhhhhHHH
Confidence            4567788899999999999999999888776544322211    111110   0  112334444455555544444433


Q ss_pred             hhhcccceeeecCCCchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhc-ChhHHHHHHHHHHHHHHHHHHHHHHHhhhc
Q 015168           85 VAVERDWAVLLAGINRPIALAKANAVLNRIDLLCEIAGASLFGILLSKY-EPVTCLKFAAGLIMWSLPVMIILTWFTNKI  163 (412)
Q Consensus        85 ~ai~RDwv~~l~~~~~~~~L~~~Ns~l~~id~v~~llgP~lgG~L~~~~-~~~~~~~~~~~~~~~s~~~~~~~l~~~~~~  163 (412)
                      . +..|    .++++   +..++++.......++.+++|.+++.+.... +|+..+++......+....   .....+..
T Consensus       139 ~-~i~~----~~~~~---~r~~~~~~~~~~~~~g~~i~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~---~~~~~~~~  207 (447)
T d1pw4a_         139 R-TMVH----WWSQK---ERGGIVSVWNCAHNVGGGIPPLLFLLGMAWFNDWHAALYMPAFCAILVALF---AFAMMRDT  207 (447)
T ss_dssp             H-HHHT----TCTTT---HHHHHHHHHHHHHHHHHTSHHHHHHHHHHHTCCSTTCTHHHHHHHHHHHHH---HHHHCCCS
T ss_pred             H-HHHH----HHHhh---cccccccccccccchhhhhhhhhhhhHhhhhhcccccchhhhhhHHHHHHH---HHHhcccc
Confidence            3 3334    45543   7889999999999999999999999988865 7887765544333332211   11111111


Q ss_pred             cccccccccccccccCCCCCCCCCCchhhhHHhHHHHHHhHHHHhcCCcchHHHHHHHHHHHhhhccchHHHHHHHh-cC
Q 015168          164 SSGVLDRAKCSQSCCRTSNEGPVPDADNIVDVGIEAIKLGWKEYMQQPVLPASLAYVLLCLNVVLTPGSLMTAFLTQ-RG  242 (412)
Q Consensus       164 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~v~~~~~~~a~l~~t~v~~~~~~~~~y~~~-~g  242 (412)
                      |+ ....++.++...++++  ...+..   +.........++..+++|.++.......++......+....+.|+.+ +|
T Consensus       208 ~~-~~~~~~~~~~~~~~~~--~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  281 (447)
T d1pw4a_         208 PQ-SCGLPPIEEYKNDYPD--DYNEKA---EQELTAKQIFMQYVLPNKLLWYIAIANVFVYLLRYGILDWSPTYLKEVKH  281 (447)
T ss_dssp             ST-TTCCCSCTTTCCC------------------CCTHHHHHHTSSCHHHHHHHHHHHHHHHHHHHHHHHHHHHBTTBSC
T ss_pred             hh-hcccchhhhhhhhccc--chhhcc---ccccchhhHHHHHHHcCchHHHHHHHhhhhhhhhhcchhhhhhhcccccc
Confidence            11 1000000000000000  000000   00011112345667788877764443333311112233345566654 79


Q ss_pred             CCCchhHHHhhHHHHHHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHHhcCCCcCcchHHHHHHHHHHhhhhh
Q 015168          243 LNPSIIGGFSGLCASMGVAATFLSAYLVRRLGILKAGAAGLIFQASLLAMAVAVYWSGSLSQQNPLLFFLCLIVLSRLGH  322 (412)
Q Consensus       243 ls~~~~G~~~~~~avggllGt~l~~~l~~R~g~~r~~~~~~~~~~~~l~~~v~~~~~g~~~~~~~~~l~~~g~~~sr~GL  322 (412)
                      .++...+.......++++.|.++.+++.+|++..+................ ....... . .... ......+..+++.
T Consensus       282 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~-~-~~~~-~~~~~~~~~g~~~  357 (447)
T d1pw4a_         282 FALDKSSWAYFLYEYAGIPGTLLCGWMSDKVFRGNRGATGVFFMTLVTIAT-IVYWMNP-A-GNPT-VDMICMIVIGFLI  357 (447)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSTTCHHHHHHHHHHHHHHHH-HHTTSCC-T-TCHH-HHHHHHHHHHHHH
T ss_pred             cccchhhhhhhcchhhhhhhhhhhhhhhhhccccccccccchhHHHHHHHH-HHHHhcc-c-ccHH-HHHHHHHHHHHHH
Confidence            999999999999999999999999999999998654443333211111111 1111111 0 1111 1111222223343


Q ss_pred             hhhhhhhhHHhhccCCcccchhHHHHHHHHHHHHH-HHHHHH-HHhccCCCchhHHHHHHHHHHHHHHHHHHHHhc
Q 015168          323 MSYDIVGAQILQTGIPSSKANLIGTTEISVASLVE-SVMLGV-AIIANDVSHFGFLATLSLLSVVGAAWMFCHWLL  396 (412)
Q Consensus       323 w~~dl~~~~l~Q~~vp~~~~G~v~g~~~sl~~~~~-ll~~~~-~~~~~~~~~f~~l~~~s~~~v~~~~~~~~~~~~  396 (412)
                      ...........++..|++.||++.|+.+..++..+ +....+ +.+....+.......+..+++.+...++.....
T Consensus       358 ~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~~g~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~  433 (447)
T d1pw4a_         358 YGPVMLIGLHALELAPKKAAGTAAGFTGLFGYLGGSVAASAIVGYTVDFFGWDGGFMVMIGGSILAVILLIVVMIG  433 (447)
T ss_dssp             THHHHHHHHHHHHTSCTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCSHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHHHHh
Confidence            33445566778888999999999999999888744 333444 344444444444444455555555555555433

>d1pv7a_ f.38.1.2 (A:) Lactose permease {Escherichia coli [TaxId: 562]}

class: Membrane and cell surface proteins and peptides
fold: MFS general substrate transporter
superfamily: MFS general substrate transporter
family: LacY-like proton/sugar symporter
domain: Lactose permease
species: Escherichia coli [TaxId: 562]

Probab=99.52  E-value=4.7e-14  Score=134.52  Aligned_cols=346  Identities=13%  Similarity=-0.007  Sum_probs=166.0

Q ss_pred             hhHHHHHHhhhhhcchhccCCcHHHHHHHHHHHHHHHHHHHHHHHHHhccccccccchhHHHHHHHHHHHHHHHHHhhhh
Q 015168            4 FSKLILIVGGPLVGKLMDHSPRIPAYICLNTVQAAAQLLSAAMIIHAHTVIPTSSSMLLHPWFFVLVLAGAVERLTGVAL   83 (412)
Q Consensus         4 ~~~lp~ll~g~~~G~~vDr~~R~~v~~~~~~~q~~~v~~s~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~l~~~a~   83 (412)
                      +..++.++.+++.|.+.||++|||++..+.....+...+.    .......     ......++.....+........+.
T Consensus        51 ~~~l~~~i~~~~~G~l~Dr~grr~~l~~~~~~~~~~~~~~----~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~  121 (417)
T d1pv7a_          51 AISLFSLLFQPLFGLLSDKLGLRKYLLWIITGMLVMFAPF----FIFIFGP-----LLQYNILVGSIVGGIYLGFCFNAG  121 (417)
T ss_dssp             HHHHHHHHTHHHHHHHHHHHTTCTHHHHHHHHHHHTHHHH----HHHTHHH-----HHHTTCHHHHHHTTTTGGGGGTTH
T ss_pred             HHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHH----HHhhhhh-----hHHHHHHHHHHHhhhcccccccch
Confidence            3467888999999999999999999888876554432211    1111100     000111222222222211111111


Q ss_pred             hhhhcccceeeecCCCchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhcChhHHHHHHHHHHHHHHHHHHHHHHHhhhc
Q 015168           84 GVAVERDWAVLLAGINRPIALAKANAVLNRIDLLCEIAGASLFGILLSKYEPVTCLKFAAGLIMWSLPVMIILTWFTNKI  163 (412)
Q Consensus        84 ~~ai~RDwv~~l~~~~~~~~L~~~Ns~l~~id~v~~llgP~lgG~L~~~~~~~~~~~~~~~~~~~s~~~~~~~l~~~~~~  163 (412)
                      ..... +    ..+++ +.+..+.+............++|.++|.+....++...... ........   .   ......
T Consensus       122 ~~~~~-~----~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~-~~~~~~~~---~---~~~~~~  188 (417)
T d1pv7a_         122 APAVE-A----FIEKV-SRRSNFEFGRARMFGCVGWALGASIVGIMFTINNQFVFWLG-SGCALILA---V---LLFFAK  188 (417)
T ss_dssp             HHHHH-H----HHHHH-HHHHSCCHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHH-HHHHHHHH---H---HHHSSC
T ss_pred             hhccc-c----cccch-hhhhHHHHHHHhhhhccccccccccccccccccccccccch-hhHHHHHH---H---HHHHHh
Confidence            11111 1    11211 12455667777888888899999999999986554443222 11111111   1   111222


Q ss_pred             cccccccccccccccCCCCCCCCCCchhhhHHhHHHHHHhHHHHhcCCcchHHHHHHHHH-HHhhhccchHHHHHHH---
Q 015168          164 SSGVLDRAKCSQSCCRTSNEGPVPDADNIVDVGIEAIKLGWKEYMQQPVLPASLAYVLLC-LNVVLTPGSLMTAFLT---  239 (412)
Q Consensus       164 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~v~~~~~~~a~l~-~t~v~~~~~~~~~y~~---  239 (412)
                      +++. ..+++.+++ ++ +  ..+. .          .+......+++..+......... .. ...+......|..   
T Consensus       189 ~~~~-~~~~~~~~~-~~-~--~~~~-~----------~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~  251 (417)
T d1pv7a_         189 TDAP-SSATVANAV-GA-N--HSAF-S----------LKLALELFRQPKLWFLSLYVIGVSCT-YDVFDQQFANFFTSFF  251 (417)
T ss_dssp             CCSC-SSSCSSHHH-HS-C--CCCC-C----------HHHHHHHTTSSHHHHHHHHHHHHHHH-HHHHHHHHHHHHTTSS
T ss_pred             cccc-cchhhhhhh-hh-h--cccc-c----------ccccccccccccccchhhhhHHHHHH-HHhhhccccccccccc
Confidence            3211 111111000 00 0  0000 0          01122233344333321111111 11 0111111222221   


Q ss_pred             -hcCCCCchhHHHhhHHHHHHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHHhcCCCcCcchHHHHHHHHHHh
Q 015168          240 -QRGLNPSIIGGFSGLCASMGVAATFLSAYLVRRLGILKAGAAGLIFQASLLAMAVAVYWSGSLSQQNPLLFFLCLIVLS  318 (412)
Q Consensus       240 -~~gls~~~~G~~~~~~avggllGt~l~~~l~~R~g~~r~~~~~~~~~~~~l~~~v~~~~~g~~~~~~~~~l~~~g~~~s  318 (412)
                       +.+.++...+...+..+++.+.+..+.+++.+|.|.++...++......+   ........+   .....   ...++.
T Consensus       252 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~r~~~~~~~~~~~~~~~~~---~~~~~~~~~---~~~~~---~~~~l~  322 (417)
T d1pv7a_         252 ATGEQGTRVFGYVTTMGELLNASIMFFAPLIINRIGGKNALLLAGTIMSVR---IIGSSFATS---ALEVV---ILKTLH  322 (417)
T ss_dssp             SCHHHHHHHHHHHHHHHHHHHHHHHTTHHHHHHHHCHHHHHHHHHHHHHHH---HHHHHTCCC---HHHHH---HHHHHH
T ss_pred             cccccchhhhcccccccccccccchhhhhhhhcccccccchhhhHHHHHHh---hhccccccc---cchhh---HHHHHH
Confidence             24556777888899999999999999999999999999887665432221   111222211   11111   122222


Q ss_pred             hhhhhhhhhhhhHHhhccCCcccchhHHHHHHHHH-HHHHHHHHHHHHhccCCCchhHHHHHHHHHHHHHHHHHHHHhcC
Q 015168          319 RLGHMSYDIVGAQILQTGIPSSKANLIGTTEISVA-SLVESVMLGVAIIANDVSHFGFLATLSLLSVVGAAWMFCHWLLN  397 (412)
Q Consensus       319 r~GLw~~dl~~~~l~Q~~vp~~~~G~v~g~~~sl~-~~~~ll~~~~~~~~~~~~~f~~l~~~s~~~v~~~~~~~~~~~~~  397 (412)
                      +++..........+.|+.+|+++||++.|...++. .....+...+.....|...+.....+..+.............++
T Consensus       323 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~~~G~l~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~  402 (417)
T d1pv7a_         323 MFEVPFLLVGCFKYITSQFEVRFSATIYLVCFCFFKQLAMIFMSVLAGNMYESIGFQGAYLVLGLVALGFTLISVFTLSG  402 (417)
T ss_dssp             HHHHHHHHHHHHHHHHHHSCGGGHHHHHHHHHTTTHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHSCC
T ss_pred             HHHHHHHHHHHHHHHHHHCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHhhcC
Confidence            33433466778888999999999999999865543 34344444444333333223333333222233333344444444

>d1pw4a_ f.38.1.1 (A:) Glycerol-3-phosphate transporter {Escherichia coli [TaxId: 562]}

class: Membrane and cell surface proteins and peptides
fold: MFS general substrate transporter
superfamily: MFS general substrate transporter
family: Glycerol-3-phosphate transporter
domain: Glycerol-3-phosphate transporter
species: Escherichia coli [TaxId: 562]

Probab=98.43  E-value=2.1e-06  Score=82.32  Aligned_cols=124  Identities=12%  Similarity=0.003  Sum_probs=85.6

Q ss_pred             HHHHHHhcCCCCchhHHHhhHHHHHHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHH-HHhcCCCcCcchHHHHH
Q 015168          234 MTAFLTQRGLNPSIIGGFSGLCASMGVAATFLSAYLVRRLGILKAGAAGLIFQASLLAMAVA-VYWSGSLSQQNPLLFFL  312 (412)
Q Consensus       234 ~~~y~~~~gls~~~~G~~~~~~avggllGt~l~~~l~~R~g~~r~~~~~~~~~~~~l~~~v~-~~~~g~~~~~~~~~l~~  312 (412)
                      ...|+.++|+|++++|++.+...++..++....+++.+|+|+++...++.....+....+.. ......    ...++. 
T Consensus        47 ~~p~~~~~g~s~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~-  121 (447)
T d1pw4a_          47 AMPYLVEQGFSRGDLGFALSGISIAYGFSKFIMGSVSDRSNPRVFLPAGLILAAAVMLFMGFVPWATSS----IAVMFV-  121 (447)
T ss_dssp             HHHHTTSSTTCSSCHHHHHHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHHHHCHHHHSS----SSHHHH-
T ss_pred             HHHHHHHhCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCchHHHHHHHHHHHHHHhhccccchhhhh----HHHHHH-
Confidence            34467789999999999999999999999999999999999999988887654433332211 111111    111111 


Q ss_pred             HHHHHhhhhhhhhhhhhhHHhhccCCcccchhHHHHHHHHHHHHHHHHHHH
Q 015168          313 CLIVLSRLGHMSYDIVGAQILQTGIPSSKANLIGTTEISVASLVESVMLGV  363 (412)
Q Consensus       313 ~g~~~sr~GLw~~dl~~~~l~Q~~vp~~~~G~v~g~~~sl~~~~~ll~~~~  363 (412)
                       +-++.++|.-....+...+..+..|+++||++.+..++.......+....
T Consensus       122 -~~~~~g~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~i~~~~  171 (447)
T d1pw4a_         122 -LLFLCGWFQGMGWPPCGRTMVHWWSQKERGGIVSVWNCAHNVGGGIPPLL  171 (447)
T ss_dssp             -HHHHHHHHHHHTHHHHHHHHHTTCTTTHHHHHHHHHHHHHHHHHTSHHHH
T ss_pred             -HHHHHHHhhhhhhhHHHHHHHHHHHhhcccccccccccccchhhhhhhhh
Confidence             12222333333556677788899999999999999888887755544443

>d1pv7a_ f.38.1.2 (A:) Lactose permease {Escherichia coli [TaxId: 562]}

class: Membrane and cell surface proteins and peptides
fold: MFS general substrate transporter
superfamily: MFS general substrate transporter
family: LacY-like proton/sugar symporter
domain: Lactose permease
species: Escherichia coli [TaxId: 562]

Probab=98.03  E-value=1.3e-05  Score=74.62  Aligned_cols=80  Identities=11%  Similarity=0.009  Sum_probs=59.2

Q ss_pred             HhcCCcchHHHHHHHHH-HHhhhccchHHHHHHHh-cCCCCchhHHHhhHHHHHHHHHHHHHHHHHHHhchhhHHHHHHH
Q 015168          207 YMQQPVLPASLAYVLLC-LNVVLTPGSLMTAFLTQ-RGLNPSIIGGFSGLCASMGVAATFLSAYLVRRLGILKAGAAGLI  284 (412)
Q Consensus       207 ~~~~~v~~~~~~~a~l~-~t~v~~~~~~~~~y~~~-~gls~~~~G~~~~~~avggllGt~l~~~l~~R~g~~r~~~~~~~  284 (412)
                      ++|||-++-.....+++ +. ...+.+..+.|+++ .|+|++++|++.++..++.+++....+++.+|+|++|...++..
T Consensus         3 ~lkn~~~~~l~~~~f~~~~~-~~~~~~~l~~~l~~~~g~s~~~~g~i~s~~~l~~~i~~~~~G~l~Dr~grr~~l~~~~~   81 (417)
T d1pv7a_           3 YLKNTNFWMFGLFFFFYFFI-MGAYFPFFPIWLHDINHISKSDTGIIFAAISLFSLLFQPLFGLLSDKLGLRKYLLWIIT   81 (417)
T ss_dssp             HHHSHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHTTCTHHHHHHH
T ss_pred             cccCchHHHHHHHHHHHHHH-HHHHHHHHHHHHHHccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHH
Confidence            46677666533322222 22 12234456678765 79999999999999999999999999999999999999887765


Q ss_pred             HHH
Q 015168          285 FQA  287 (412)
Q Consensus       285 ~~~  287 (412)
                      ...
T Consensus        82 ~~~   84 (417)
T d1pv7a_          82 GML   84 (417)
T ss_dssp             HHH
T ss_pred             HHH
Confidence            443