Citrus Sinensis ID: 015261

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410
Protein Sequence
MPGLTCNSCNREFNDDAEQKLHYKSDWHRYNLKRKVAGVPGVTEALFLARQAALAQEKNKNATPMTYSCGLCGKGYRSSKALAQHLNSRSHIMRASQGTSNEEKEKVIIKPIPLRDVNKPPRKREANNEESEDSDDEWEEVGPDEVLVSEATNSLTNLNVGSPADDDLEEDDDDGAFEEFDPACCFMCDLPHDAIENCMVHMHKCHGFFIPDVEYLKDPKGLLTYLGLKVKRDFMCLYCNDRCHPFNSLEAVRKHMEAKRHCKIHFGDGDDEEEAELEEFYDYSSSYMDEDGKQLISSSDMANTVELGGGSELIITKRTDKGTSTKTFGSREYLRYYRQKPRPSPANNVAITAALASRYKSMGLATVQTREHMVRMKVIKEMNRTGVEAMRTRVGMKNNIIRNLPKNVPY
Secondary Structure (PSIPRED)
cccccccccccccccHHHHHHHHHHccccHHHHHHHcccccccHHHHHHHHHHHHHHHHcccccccccccccccccccHHHHHHHHHHHHHHHHHHccccHHHHHHHHcccccccccccccccccccccccccccccccccccccHHHHHHcccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHccccccccccccccHHHHHHHHHHHHHcccEEEEccccccccccHHHHHHHHHHccccccccccccHHHHHHHHHHccccccccccccccccccccccccccccccccEEEccccccccccccccccHHHHHcccccccccccHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccc
Secondary Structure Prediction (SSPRO)
ccccEEccEEEEEccHHHHHHHHccHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHcccccccccHcccccccHHHHHHHHccHHHHHHHHHHcccHHHHHHHHccccccccccccccccccccccccHHHHHHHHcHHHHHHccccccccccccccccHHHHHHHcccccccccccccEEEcccccccHHHHHHHHHHHcccccccHHHcccHHHHHHHHHHHHccccEEEEEcccccccccHHHHHHHHHccccccEcccccccHHHHHHHHHcccccccccccccccccccccccccccccccEEEccccEEEcccccEEcHHHHHHHHHHcccccccccHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHcccccccc
Coil and Loop (DISEMBL)
mpgltcnscnrefnddaeqklhyksdwhrynlkrkvagvpgvTEALFLARQAALAQEknknatpmtyscglcgkgyrsSKALAQHLNSRShimrasqgtsneekekviikpiplrdvnkpprkreanneesedsddeweevgpdevLVSEATnsltnlnvgspadddleeddddgafeefdpaccfmcdlphdaiENCMVHMhkchgffipdveylkdpkglLTYLGLKvkrdfmclycndrchpfnsLEAVRKHMEAKRhckihfgdgddeeEAELEEFYdysssymdedgkqlisssdmantvelgggseliitkrtdkgtstktfgsreYLRYyrqkprpspannVAITAALASRYKsmglatvqTREHMVRMKVIKEMNRTGVEAMRTRVGMKNNiirnlpknvpy
Flexible Loop (DISEMBL)
MPGLTCNSCNREFNDDAEQKlhyksdwhrynLKRKVAGVPGVTEALFLARQAALAqeknknatpmTYSCGLCGKGYRSSKALAQHLNSRSHImrasqgtsneekekviikpiplrdvnkpprkreanneesedsddeweeVGPDEVLVSeatnsltnlnvgspaddDLEEDDDDGAFEEFDPACCFMCDLPHDAIENCMVHMHKCHGFFIPDVEYLKDPKGLLTYLGLKVKRDFMCLYCNDRCHPFNSLEAVRKHMEAKRHCKIhfgdgddeeeAELEEFYDYSSSYMDEDGKQLISSSDMANTVELgggseliitkrtdkgtstktfgsreylryyrqkprpspanNVAITAALASRYKSmglatvqtrehmVRMKVIKEmnrtgveamrtrvgmknniirnlpknvpy
Low Complexity Region (SEG)
MPGLTCNSCNREFNDDAEQKLHYKSDWHRYNLKRKVAGVPGVTEalflarqaalaqEKNKNATPMTYSCGLCGKGYRSSKALAQHLNSRSHIMRASQGTSNEEKEKVIIKPIPLRDVNKPPRKREANNeesedsddeweeVGPDEVLVSEATNSLTNLNVGSPadddleeddddgafeefdPACCFMCDLPHDAIENCMVHMHKCHGFFIPDVEYLKDPKGLLTYLGLKVKRDFMCLYCNDRCHPFNSLEAVRKHMEAKRHCKIHfgdgddeeeaeleefydySSSYMDEDGKQLISSSDMANTVELGGGSELIITKRTDKGTSTKTFGSREYLRYYRQKPRPSPANNVAITAALASRYKSMGLATVQTREHMVRMKVIKEMNRTGVEAMRTRVGMKNNIIRNLPKNVPY
Disordered region (IsUnstruct)
*******************KLHYKSDWHRYNLKRKVAGVPGVTEALFLARQAALAQ*****ATPMTYSCGLCGKGY******************************************************************************************************EFDPACCFMCDLPHDAIENCMVHMHKCHGFFIPDVEYLKDPKGLLTYLGLKVKRDFMCLYCNDRCHPFNSLEAVRKHMEAKRHCKIHFG*********************************************LII****************EYLRYY***********VAITAALASRYKSMGLATVQTREHMVRMKVIKEMNRTGVE**********************
Disordered Region (DISOPRED)
*PGLTCNSCNREFNDDAEQKLHYKSDWHRYNLKRKVAGVPGVTEALFLARQAALAQEKNKNATPMTYSCG***********************************************************************************************DDLEEDDDDGAFEEFDPACCFMCDLPHDAIENCMVHMHKCHGFFIPDVEYLKDPKGLLTYLGLKVKRDFMCLYCNDRCHPFNSLEAVRKHMEAKRHCKIHFGDGDDEEEAELEEFYDYSSSYMD******************GGGSELIITK******************************************************************************MKNNIIRNL******
Disordered Region (DISEMBL)
MPGLTCNSCNREFNDDAEQKLHYKSDWHRYNLKRKVAGVPGVTEALFLARQAALAQEKNKNATPMTYSCGLCGKGYRSSKALAQHLNSRSHI************EKVIIKPIPLRDVNK**********************GPDEVLVSEATNSLTNLNVGSPADDDLEEDDDDGAFEEFDPACCFMCDLPHDAIENCMVHMHKCHGFFIPDVEYLKDPKGLLTYLGLKVKRDFMCLYCNDRCHPFNSLEAVRKHMEAKRHCKIHFGDGDDEEEAELEEFYDYSSSYMDEDGKQLISSSDMANTVELGGGSELIITKRTDKGTSTKTFGSREYLRYYRQKPRPSPANNVAITAALASRYKSMGLATVQTREHMVRMKVIKEMNRTGVEAMRTRVGMKNNIIRNLPKNVPY
Disordered Region (DISPRO)
*PGLTCNSCNREFNDDAEQKLHYKSDWHRYNLKRKVAGVPGVTEALFLARQAALAQEKNKNATPMTYSCGLCGKGYRSSKALAQHLNSRSHIMRASQGT*****************************************************************************FEEFDPACCFMCDLPHDAIENCMVHMHKCHGFFIPDVEYLKDPKGLLTYLGLKVKRDFMCLYCNDRCHPFNSLEAVRKHMEAKRHCKIHFGDGDDEEEAELEEFYDYSSSY********************GGGSELIITKRTDKGTSTKTFGSREYLRYYRQKPRPSPANNVAITAALASRYKSMGLATVQTREHMVRMKVIKEMNRTGVEAMRTRVGMKNNIIRNLPKNVP*
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MPGLTCNSCNREFNDDAEQKLHYKSDWHRYNLKRKVAGVPGVTEALFLARQAALAQEKNKNATPMTYSCGLCGKGYRSSKALAQHLNSRSHIMRASQGTSNEEKEKVIIKPIPLRDVNKPPRKREANNEESEDSDDEWEEVGPDEVLVSEATNSLTNLNVGSPADDDLEEDDDDGAFEEFDPACCFMCDLPHDAIENCMVHMHKCHGFFIPDVEYLKDPKGLLTYLGLKVKRDFMCLYCNDRCHPFNSLEAVRKHMEAKRHCKIHFGDGDDEEEAELEEFYDYSSSYMDEDGKQLISSSDMANTVELGGGSELIITKRTDKGTSTKTFGSREYLRYYRQKPRPSPANNVAITAALASRYKSMGLATVQTREHMVRMKVIKEMNRTGVEAMRTRVGMKNNIIRNLPKNVPY
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	410	2.2.26 [Sep-21-2011]
Q91VY9	476	Zinc finger protein 622 O	yes	no	0.948	0.817	0.291	9e-41
O59811	463	Zinc finger protein C550.	yes	no	0.675	0.598	0.294	6e-33
Q969S3	477	Zinc finger protein 622 O	yes	no	0.5	0.429	0.350	2e-24
Q7TM96	386	Zinc finger protein 622 O	no	no	0.248	0.264	0.476	2e-20
Q90Y35	405	Zinc finger protein 622 O	yes	no	0.295	0.298	0.418	7e-20
Q06709	432	Zinc finger protein REH1	yes	no	0.870	0.826	0.263	7e-20
P38344	393	Pre-60S factor REI1 OS=Sa	no	no	0.104	0.109	0.558	2e-07
Q66H85	722	Ankyrin repeat and zinc f	no	no	0.107	0.060	0.409	0.0001
Q80UU1	748	Ankyrin repeat and zinc f	no	no	0.107	0.058	0.409	0.0001
Q9H8Y5	726	Ankyrin repeat and zinc f	no	no	0.119	0.067	0.4	0.0001

>sp|Q91VY9|ZN622_MOUSE Zinc finger protein 622 OS=Mus musculus GN=Znf622 PE=2 SV=1

 Score =  168 bits (425), Expect = 9e-41,   Method: Compositional matrix adjust.
 Identities = 141/483 (29%), Positives = 205/483 (42%), Gaps = 94/483 (19%)

Query: 1   MPGLTCNSCNREFNDDAEQKLHYKSDWHRYNLKRKVAGVPGVTEALFLAR---QAALAQE 57
           M  LTC +C   F D   Q+ HYK+DWHRYNL+RKVA +  VT   F  R   Q A+A+ 
Sbjct: 1   MAALTCITCRVAFRDAELQRAHYKTDWHRYNLRRKVAAMAPVTAEGFQERVRAQRAVAEA 60

Query: 58  KNKNATPMTYSCGLCGKGYRSSKALAQHLNSRSH-------------------------- 91
              +    TY C  CGK + +  A   HL SR H                          
Sbjct: 61  AEASKGAATY-CTACGKKFATFNAYENHLGSRRHAELERKAVRAASRRVELLNAKNLEKG 119

Query: 92  --------------IMRASQGTSNEEKEKVIIKP-------------IPLRD-VNKPPRK 123
                         I +A +   +   +K    P             +P RD   KPPR 
Sbjct: 120 LGADGVDKDAVNAAIQQAIKAQPSTSPKKAPFVPTDECGRAAAGARGVPERDPTEKPPRL 179

Query: 124 REANNEESEDSDDEWEEVGPDEVLVSEATNSLT--------NLNVGSPADDDLEEDDDDG 175
           +    +  + +  +WE+   +     E               L    P  +D  +D +D 
Sbjct: 180 QWFEQQAKKLAKQQWEDGEEEGEEEEEDDEDEDWEDIDSDDGLECEDPGVED--QDAEDA 237

Query: 176 AFEEFDPAC------CFMCDLPHDAIENCMVHMHKCHGFFIPDVEYLKDPKGLLTYLGLK 229
           A EE  P        C  C     ++   + HM K H FFIPD+EYL D KGL+ YLG K
Sbjct: 238 AAEESPPLGAIPITDCLFCSHHSSSLVKNVAHMTKVHSFFIPDIEYLSDLKGLIKYLGEK 297

Query: 230 VKRDFMCLYCNDRCHPFNSLEAVRKHMEAKRHCKIHFGDGDDEEEAELEEFYDYSSSYMD 289
           V    +CL+CN++   F S EAV+ HM  K HCK+ F DGD     E  +FYD+ SSY D
Sbjct: 298 VGVGKICLWCNEKGKSFYSTEAVQAHMNDKSHCKL-FTDGD--AALEFADFYDFRSSYPD 354

Query: 290 EDGKQLISSSDMANTVEL----GGGSELIITKRTDKGTSTKTFGSREYLRYYRQK---PR 342
               Q  +  +  +T ++        ELI+        S    G R  +RYY+Q+   PR
Sbjct: 355 YKEGQDPAELEALSTDKILECDDETMELIL-------PSGARVGHRSLMRYYKQRFGLPR 407

Query: 343 P-SPANNVAITAALASRYKSMGLATVQTREHMVRMKVIKEMNRTGVEAMRTRVGMKNNII 401
             + A N      +  +Y+++G     T   ++R + ++ + R   + M  ++GMKNN  
Sbjct: 408 AVTVARNQKAVGRVLQQYRALGWMG-STGAALMRERDMQYVQRMKSKWM-LKIGMKNNAT 465

Query: 402 RNL 404
           + +
Sbjct: 466 KQM 468

May behave as an activator of the bound transcription factor, MYBL2, and be involved in embryonic development.
Mus musculus (taxid: 10090)

>sp|O59811|YJVF_SCHPO Zinc finger protein C550.15c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPCC550.15c PE=1 SV=1

 Score =  142 bits (357), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 96/326 (29%), Positives = 145/326 (44%), Gaps = 49/326 (15%)

Query: 3   GLTCNSCNREFNDDAEQKLHYKSDWHRYNLKRKVAGVPGVTEALFLARQAALAQ--EKNK 60
              C +C   FN+   QK+H+KSDWH YNLKRKVA +P ++  +F  +  ++ +  E+ +
Sbjct: 4   SFACTTCTVAFNNAESQKIHWKSDWHHYNLKRKVASLPPLSAEVFAGKILSIQKQNEEVQ 63

Query: 61  NATPMTYSCGLCGKGYRSSKALAQHLNSRSHIMRASQGTSNEEKEKVIIKPIPLRDVNKP 120
                  +C +C K + S  A + H+ S+ H    S+   N       IK +   D +  
Sbjct: 64  KKAEFYQNCEVCNKKFYSEGAYSSHMASKKHRDNLSKFQRNSR-----IKKLQSEDASSI 118

Query: 121 PRKREANNEESEDSDDEWEEVGPDEVLVSEATN---SLTNLNV----------------- 160
                +  E   DS     E+  +E L S+ T+   SL+NL++                 
Sbjct: 119 ASSTLSMGEPVVDS-----EIEEEEDLASQLTSRAISLSNLSLHGRESEPSKTELATSIP 173

Query: 161 ------------GSPADDDLEEDDDDGAFEEFDPACCFMCDLPHDAIENCMVHMHKCHGF 208
                         P  +++E +    + +   P  C  C     + + C  HM   H  
Sbjct: 174 QSNEASKSHLFTQEPTPEEIEAELARRSSQRLSPRDCLFCAASFSSFDTCKKHMKASHSL 233

Query: 209 FIPDVEYLKDPKGLLTYLGLKVKRDFMCLYCNDRCHPFNSLEAVRKHMEAKRHCKIHFGD 268
           +IP+ EYL D   L  YL  K+   F CL CN     F SLEAVR HM+ K H  I +  
Sbjct: 234 YIPEREYLVDEPSLFDYLAEKISIGFTCLTCN---REFKSLEAVRAHMQQKGHTSIAYDT 290

Query: 269 GDDEEEAELEEFYDYSSSYMDEDGKQ 294
            D  E+ EL +FYD+++SY D   KQ
Sbjct: 291 ED--EQLELSDFYDFTTSYPDYAVKQ 314

Schizosaccharomyces pombe (strain 972 / ATCC 24843) (taxid: 284812)

>sp|Q969S3|ZN622_HUMAN Zinc finger protein 622 OS=Homo sapiens GN=ZNF622 PE=1 SV=1

 Score =  114 bits (284), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 81/231 (35%), Positives = 117/231 (50%), Gaps = 26/231 (11%)

Query: 185 CFMCDLPHDAIENCMVHMHKCHGFFIPDVEYLKDPKGLLTYLGLKVKRDFMCLYCNDRCH 244
           C  C     ++   + HM K H FFIPD+EYL D KGL+ YLG KV    +CL+CN++  
Sbjct: 254 CLFCSHHSSSLMKNVAHMTKDHSFFIPDIEYLSDIKGLIKYLGEKVGVGKICLWCNEKGK 313

Query: 245 PFNSLEAVRKHMEAKRHCKIHFGDGDDEEEAELEEFYDYSSSYMD----ED---GKQLIS 297
            F S EAV+ HM  K HCK+ F DGD     E  +FYD+ SSY D    ED    ++L S
Sbjct: 314 SFYSTEAVQAHMNDKSHCKL-FTDGD--AALEFADFYDFRSSYPDHKEGEDPNKAEELPS 370

Query: 298 SSDMANTVELGGGSELIITKRTDKGTSTKTFGSREYLRYYRQKPRPSPANNVA----ITA 353
             ++    E     ELI+        S    G R  +RYY+Q+   S A  VA       
Sbjct: 371 EKNLEYDDET---MELIL-------PSGARVGHRSLMRYYKQRFGLSRAVAVAKNRKAVG 420

Query: 354 ALASRYKSMGLATVQTREHMVRMKVIKEMNRTGVEAMRTRVGMKNNIIRNL 404
            +  +Y+++G  T  T   ++R + ++ + R   + M  + GMKNN  + +
Sbjct: 421 RVLQQYRALGW-TGSTGAALMRERDMQYVQRMKSKWM-LKTGMKNNATKQM 469

May behave as an activator of the bound transcription factor, MYBL2, and be involved in embryonic development.

Homo sapiens (taxid: 9606)

>sp|Q7TM96|ZN622_RAT Zinc finger protein 622 OS=Rattus norvegicus GN=Znf622 PE=2 SV=2

 Score =  100 bits (250), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 50/105 (47%), Positives = 63/105 (60%), Gaps = 3/105 (2%)

Query: 185 CFMCDLPHDAIENCMVHMHKCHGFFIPDVEYLKDPKGLLTYLGLKVKRDFMCLYCNDRCH 244
           C  C     ++   + HM K H FFIPD+EYL D KGL+ YLG KV    +CL+CN++  
Sbjct: 247 CLFCSHHSSSLVKNVAHMTKVHSFFIPDIEYLSDLKGLIKYLGEKVGVGKICLWCNEKGK 306

Query: 245 PFNSLEAVRKHMEAKRHCKIHFGDGDDEEEAELEEFYDYSSSYMD 289
            F S EAV+ HM  K HCK+ F DGD     E  +FYD+ SSY D
Sbjct: 307 SFYSTEAVQAHMNDKSHCKL-FTDGD--AALEFADFYDFRSSYPD 348

May behave as an activator of the bound transcription factor, MYBL2, and be involved in embryonic development.

Rattus norvegicus (taxid: 10116)

>sp|Q90Y35|ZN622_CHICK Zinc finger protein 622 OS=Gallus gallus GN=ZNF622 PE=2 SV=1

 Score = 98.6 bits (244), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 54/129 (41%), Positives = 69/129 (53%), Gaps = 8/129 (6%)

Query: 185 CFMCDLPHDAIENCMVHMHKCHGFFIPDVEYLKDPKGLLTYLGLKVKRDFMCLYCNDRCH 244
           C  C      +   + HM K H FFIPD+EYL D +GL+ YLG K+    +C++CN++  
Sbjct: 246 CLFCSHHSRTLMKNVAHMTKVHSFFIPDIEYLVDLRGLIKYLGEKIGVGKICIWCNEKGK 305

Query: 245 PFNSLEAVRKHMEAKRHCKIHFGDGDDEEEAELEEFYDYSSSYMDEDGKQLISSSDMANT 304
            F S EAV+ HM  K HCK+ F DGD     E  +FYD+ SSY D    Q     DM   
Sbjct: 306 SFYSTEAVQAHMNDKSHCKL-FTDGD--AALEFADFYDFRSSYPDHKEGQ-----DMEVP 357

Query: 305 VELGGGSEL 313
            EL    EL
Sbjct: 358 AELPSDREL 366

May behave as an activator of the bound transcription factor, MYBL2, and be involved in embryonic development.

Gallus gallus (taxid: 9031)

>sp|Q06709|REH1_YEAST Zinc finger protein REH1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=REH1 PE=1 SV=1

 Score = 98.6 bits (244), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 111/422 (26%), Positives = 171/422 (40%), Gaps = 65/422 (15%)

Query: 4   LTCNSCNREFNDDAEQKLHYKSDWHRYNLKRKVAGVPGVTEALFLARQAALAQEKNKNAT 63
            TCN C  +F     Q+ H K++WHRYNLKR++A +P +    F  +     +E+ +N  
Sbjct: 6   FTCNCCVIQFKTSDLQRYHMKTEWHRYNLKRRIANLPPIGAEQFAEKLQISEKEQAENQV 65

Query: 64  PMTYSCGLCGKGYRSSKALAQHLNSRSHIMRASQGTSNEEKEKVIIKPIPLRDVNKPPRK 123
              +   +       S AL Q         R  +  +N  K K        RD+ K  + 
Sbjct: 66  D-EFGFPVLKPVMNQSNALPQKQKKPIKSKRGRKVGTNLLKRKD-------RDIAKEKQN 117

Query: 124 REANNEESEDSDDEWEEVGPDEVLVSEATNSLTNLNVGS-------PADDDLEEDD--DD 174
           R  +   S  S      VG +        ++++     S        +D++L+  D   D
Sbjct: 118 RSVSPSGSISSQLSNLTVGTENTNTDYGEDTVSEYGFTSDSNYEYATSDEELDIADKPSD 177

Query: 175 GAFEEFDPACCFMCDLPHDAIENCMVHMHKCHGFFIPDVEYLKDPKGLLTYLGLKVKRDF 234
              E+     C  C   +  +E  + HM   HG FIP+  YL D  GLL +L   +  D 
Sbjct: 178 KENEKITITECIYCGKDNKEVERNVKHMFSEHGLFIPERSYLIDLNGLLEFLIKMIVIDH 237

Query: 235 MCLYCNDRCHPFNSLEAVRKHMEAKRHCKIHFGDGDDEEEAELEEFYDY----------- 283
            CL CN      + LE++R HM +KRHC++ +     EE      FYD+           
Sbjct: 238 NCLCCN---FHGSGLESIRAHMASKRHCRLPY--ETKEERQLFAPFYDFTYDDHSISKNL 292

Query: 284 ----------SSSYM----DEDGK---QLISSSDMAN----TVELG-GGSELIITKRTDK 321
                     SS Y     +EDG+    L+SS +  N    TV +   G EL +      
Sbjct: 293 QNDRAITSKLSSVYGAKNDEEDGEVDITLVSSENDINANYTTVSIDESGLELTL------ 346

Query: 322 GTSTKTFGSREYLRYYRQK--PRPSPANNVAITAALASRYKSMGLATVQTREHMVRMKVI 379
             +    G R   RYYRQ    +P+P N    T   A R    G+   Q ++ M +M+ +
Sbjct: 347 -PTGARLGHRAGQRYYRQNLPSQPNP-NESRRTITAADRRMVSGVTEKQYKKGMKKMQQL 404

Query: 380 KE 381
           ++
Sbjct: 405 EK 406

Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (taxid: 559292)

>sp|P38344|REI1_YEAST Pre-60S factor REI1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=REI1 PE=1 SV=3

 Score = 57.4 bits (137), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 24/43 (55%), Positives = 30/43 (69%)

Query: 5  TCNSCNREFNDDAEQKLHYKSDWHRYNLKRKVAGVPGVTEALF 47
          TCNSC   F+   EQ+ H KSDWHRYNLKR+VA +P ++   F
Sbjct: 8  TCNSCVLTFDSSDEQRAHMKSDWHRYNLKRRVAQLPPISFETF 50

Pre-60S-associated cytoplasmic factor invoved in the dissociation and recycling of other late pre-60S factors like ARX1, TIF6 and ALB1 before newly synthesized large ribosomal subunits enter translation.

Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (taxid: 559292)

>sp|Q66H85|ANKZ1_RAT Ankyrin repeat and zinc finger domain-containing protein 1 OS=Rattus norvegicus GN=Ankzf1 PE=2 SV=1

 Score = 48.1 bits (113), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 18/44 (40%), Positives = 31/44 (70%)

Query: 4   LTCNSCNREFNDDAEQKLHYKSDWHRYNLKRKVAGVPGVTEALF 47
           L C++C++ F +  EQ+ HYK DWHR+NLK+++   P ++ + F
Sbjct: 70  LFCSACDQVFQNHQEQREHYKLDWHRFNLKQRLKNKPLLSASDF 113

Involved in the endoplasmic reticulum (ER)-associated degradation (ERAD) pathway.

Rattus norvegicus (taxid: 10116)

>sp|Q80UU1|ANKZ1_MOUSE Ankyrin repeat and zinc finger domain-containing protein 1 OS=Mus musculus GN=Ankzf1 PE=2 SV=2

 Score = 47.8 bits (112), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 18/44 (40%), Positives = 31/44 (70%)

Query: 4   LTCNSCNREFNDDAEQKLHYKSDWHRYNLKRKVAGVPGVTEALF 47
           L C++C++ F +  EQ+ HYK DWHR+NLK+++   P ++ + F
Sbjct: 96  LFCSACDQIFQNHQEQREHYKLDWHRFNLKQRLKNKPLLSASDF 139

Involved in the endoplasmic reticulum (ER)-associated degradation (ERAD) pathway.

Mus musculus (taxid: 10090)

>sp|Q9H8Y5|ANKZ1_HUMAN Ankyrin repeat and zinc finger domain-containing protein 1 OS=Homo sapiens GN=ANKZF1 PE=1 SV=1

 Score = 47.8 bits (112), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 20/50 (40%), Positives = 34/50 (68%), Gaps = 1/50 (2%)

Query: 4   LTCNSCNREFNDDAEQKLHYKSDWHRYNLKRKVAGVPGVTEALFLARQAA 53
           L C++C++ F +  EQ+ HYK DWHR+NLK+++   P +  AL   +Q++
Sbjct: 72  LFCSTCDQTFQNHQEQREHYKLDWHRFNLKQRLKDKP-LLSALDFEKQSS 120

Involved in the endoplasmic reticulum (ER)-associated degradation (ERAD) pathway.

Homo sapiens (taxid: 9606)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	410
255574095	407	transcription factor, putative [Ricinus	0.987	0.995	0.759	1e-170
225429787	411	PREDICTED: zinc finger protein 622 [Viti	0.992	0.990	0.722	1e-168
302398699	405	C2H2L domain class transcription factor	0.982	0.995	0.759	1e-166
356563786	407	PREDICTED: zinc finger protein 622-like	0.987	0.995	0.728	1e-165
356539178	407	PREDICTED: zinc finger protein 622-like	0.987	0.995	0.730	1e-163
356563788	407	PREDICTED: zinc finger protein 622-like	0.987	0.995	0.725	1e-162
388507466	410	unknown [Lotus japonicus]	0.995	0.995	0.711	1e-161
296081767	376	unnamed protein product [Vitis vinifera]	0.909	0.992	0.682	1e-161
388508652	410	unknown [Lotus japonicus]	0.995	0.995	0.708	1e-161
356539180	407	PREDICTED: zinc finger protein 622-like	0.990	0.997	0.715	1e-156

>gi|255574095|ref|XP_002527963.1| transcription factor, putative [Ricinus communis] gi|223532589|gb|EEF34375.1| transcription factor, putative [Ricinus communis]

 Score =  603 bits (1555), Expect = e-170,   Method: Compositional matrix adjust.
 Identities = 313/412 (75%), Positives = 353/412 (85%), Gaps = 7/412 (1%)

Query: 1   MPGLTCNSCNREFNDDAEQKLHYKSDWHRYNLKRKVAGVPGVTEALFLARQAALAQEKNK 60
           M GLTCN+CN+EFNDDA+QKLHYKSDWHRYNLKRKVAGVPGVTEALFLARQ+ L QEK+K
Sbjct: 1   MGGLTCNACNKEFNDDADQKLHYKSDWHRYNLKRKVAGVPGVTEALFLARQSVLVQEKDK 60

Query: 61  NA-TPMTYSCGLCGKGYRSSKALAQHLNSRSHIMRASQGTSNEEKEKVIIKPIPLRDVNK 119
           ++ TPM YSC LCGKGYRSSKA AQHL SRSHI+RASQG +NE ++  +IKP+P R +NK
Sbjct: 61  SSETPMLYSCVLCGKGYRSSKAHAQHLKSRSHILRASQG-ANENEDTAVIKPLPRRIMNK 119

Query: 120 PPRKREANNEESEDSDDEWEEVGPDEVLVSEATNSLTNLNVGSPADDDLEEDDDDGAFEE 179
            P +R   +EESEDS DEWEEV P+E LV +A+ SLT L+V    +   E+ D+    E 
Sbjct: 120 RPPQRAVEDEESEDSGDEWEEVDPEEELVGDASKSLTGLSVN---ETSDEDMDEGEDDEL 176

Query: 180 FDPACCFMCDLPHDAIENCMVHMHKCHGFFIPDVEYLKDPKGLLTYLGLKVKRDFMCLYC 239
            DP+CCFMCD  H  +E+CMVHMHK HGFFIPDVEYLKDPK LLTYLGLKVKRDFMCLYC
Sbjct: 177 LDPSCCFMCDQQHGNVESCMVHMHKQHGFFIPDVEYLKDPKSLLTYLGLKVKRDFMCLYC 236

Query: 240 NDRCHPFNSLEAVRKHMEAKRHCKIHFGDGDDEEEAELEEFYDYSSSYMDEDGKQLISSS 299
           NDRCHPFNSLEAVRKHM AK HCK+H+GDGDDEEEAELEEFYDYSSSY+DE+GKQLI S 
Sbjct: 237 NDRCHPFNSLEAVRKHMAAKGHCKVHYGDGDDEEEAELEEFYDYSSSYVDENGKQLIVSG 296

Query: 300 DMANTVEL-GGGSELIITKRTDKGTSTKTFGSREYLRYYRQKPRPSPANNVAITAALASR 358
           DMANTVEL GGGSELIIT R+D   S+KT GSRE+LRYYRQKPRPSPAN VAITAALASR
Sbjct: 297 DMANTVELGGGGSELIITTRSDSKISSKTLGSREFLRYYRQKPRPSPANGVAITAALASR 356

Query: 359 YKSMGLATVQTREHMVRMKVIKEMNRTGVEAMRTRVGMKNNIIRNLPKNVPY 410
           Y+SMGLATVQ+RE MVRMKV+KEMNR+  EAMRT++GMK+NIIRNLPKNVPY
Sbjct: 357 YRSMGLATVQSREQMVRMKVMKEMNRSS-EAMRTKIGMKSNIIRNLPKNVPY 407

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225429787|ref|XP_002282746.1| PREDICTED: zinc finger protein 622 [Vitis vinifera]

 Score =  598 bits (1543), Expect = e-168,   Method: Compositional matrix adjust.
 Identities = 299/414 (72%), Positives = 346/414 (83%), Gaps = 7/414 (1%)

Query: 1   MPGLTCNSCNREFNDDAEQKLHYKSDWHRYNLKRKVAGVPGVTEALFLARQAALAQEKNK 60
           M  LTCN+CN+EF  +++QKLHYKSDWHRYNLKRK+AGVPGVTEAL+LARQ++LA+EKN+
Sbjct: 1   MATLTCNACNKEFIGESDQKLHYKSDWHRYNLKRKIAGVPGVTEALYLARQSSLAEEKNR 60

Query: 61  -NATPMTYSCGLCGKGYRSSKALAQHLNSRSHIMRASQGTSNEEKEKVIIKPIPLRDVNK 119
            N TPM YSC LCGKGYRSSKAL QHL SRSHI+RASQ  S++++E  IIKP+  R  NK
Sbjct: 61  LNETPMLYSCSLCGKGYRSSKALGQHLKSRSHILRASQRASHQDEETTIIKPLTHRTANK 120

Query: 120 PPRKREANNEESEDSDDEWEEVGPDEVLVSEATNSLTNLNVGSPADDDLEEDDDDGA-FE 178
           PP +RE  NEESED     EEV PDE LV EAT S+T +NV   A +D  ++ DD   FE
Sbjct: 121 PPPQREPVNEESEDEW---EEVNPDEDLVGEATESITQMNVNEHASNDDMDESDDDDDFE 177

Query: 179 -EFDPACCFMCDLPHDAIENCMVHMHKCHGFFIPDVEYLKDPKGLLTYLGLKVKRDFMCL 237
            + DP CCFMCD   + IE C+VHMHK HGFFIPDVEYLKDPKGLLTYLGLKV RDFMCL
Sbjct: 178 IKLDPTCCFMCDQEQNTIERCIVHMHKQHGFFIPDVEYLKDPKGLLTYLGLKVTRDFMCL 237

Query: 238 YCNDRCHPFNSLEAVRKHMEAKRHCKIHFGDGDDEEEAELEEFYDYSSSYMDEDGKQLIS 297
           YCND CHPFNSLEAVRKHM AK HCK+H+GDG D+EEAELEEFYDYSSSY+D D KQL++
Sbjct: 238 YCNDGCHPFNSLEAVRKHMVAKSHCKVHYGDGGDDEEAELEEFYDYSSSYVDVDEKQLVA 297

Query: 298 SSDMANTVELG-GGSELIITKRTDKGTSTKTFGSREYLRYYRQKPRPSPANNVAITAALA 356
           S DM NTVELG GGSELIIT+RTD G STK+ GSRE+LRYYRQKPRPSP N  AITAALA
Sbjct: 298 SGDMNNTVELGCGGSELIITRRTDGGISTKSLGSREFLRYYRQKPRPSPMNGAAITAALA 357

Query: 357 SRYKSMGLATVQTREHMVRMKVIKEMNRTGVEAMRTRVGMKNNIIRNLPKNVPY 410
           SRY+SMGLATVQ+RE +VRMKV+K+MN++GVEAMR+++GMK+N+IRNLP NVPY
Sbjct: 358 SRYRSMGLATVQSREQIVRMKVMKQMNKSGVEAMRSKIGMKSNVIRNLPNNVPY 411

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|302398699|gb|ADL36644.1| C2H2L domain class transcription factor [Malus x domestica]

 Score =  590 bits (1520), Expect = e-166,   Method: Compositional matrix adjust.
 Identities = 313/412 (75%), Positives = 356/412 (86%), Gaps = 9/412 (2%)

Query: 1   MPGLTCNSCNREFNDDAEQKLHYKSDWHRYNLKRKVAGVPGVTEALFLARQAALAQEKNK 60
           M GLTCNSCN+EF DD+EQKLHYKS+WHRYNLKRK+AGVPGVTEALF+ARQAALAQEKN 
Sbjct: 1   MSGLTCNSCNKEFLDDSEQKLHYKSEWHRYNLKRKIAGVPGVTEALFIARQAALAQEKNS 60

Query: 61  -NATPMTYSCGLCGKGYRSSKALAQHLNSRSHIMRASQGTSNEEKEKVIIKPIPLRDVNK 119
            + TPM YSCGLCGKGYRSSKA A+HL SRSHI+RASQG S E++EK II+P+P R VNK
Sbjct: 61  LSETPMLYSCGLCGKGYRSSKAHAEHLKSRSHILRASQGAS-EQEEKAIIRPLPPRVVNK 119

Query: 120 PPRKREANNEESEDSDDEWEEVGPDEVLVSEATNSLTNLNVGSPADDDLEEDDDDGAFEE 179
            P KREAN+EE+E+S+DEW EV PDE L      SLT++NV   A ++  ++DD   FEE
Sbjct: 120 APPKREANDEETEESEDEWVEVDPDEDL----AKSLTDMNVDEHASEEDMDEDD--DFEE 173

Query: 180 FDPACCFMCDLPHDAIENCMVHMHKCHGFFIPDVEYLKDPKGLLTYLGLKVKRDFMCLYC 239
            DP CCFMCDL HD +E+CMVHMHK HGFFIPD+EYLKDPKGLLTYLGLKVKRDFMCLYC
Sbjct: 174 LDPTCCFMCDLEHDTLESCMVHMHKHHGFFIPDIEYLKDPKGLLTYLGLKVKRDFMCLYC 233

Query: 240 NDRCHPFNSLEAVRKHMEAKRHCKIHFGDGDDEEEAELEEFYDYSSSYMDEDGKQLISSS 299
           NDR HPFNSLEAVRKHM AK HCK+H+GD DDEEEAELEEFYDYSSSY+DE GKQL+ S 
Sbjct: 234 NDRRHPFNSLEAVRKHMVAKSHCKVHYGDDDDEEEAELEEFYDYSSSYVDEAGKQLVVSG 293

Query: 300 DMANTVELG-GGSELIITKRTDKGTSTKTFGSREYLRYYRQKPRPSPANNVAITAALASR 358
           DMAN+VELG GGSELIIT+R+D G S+KT GSREYLRYYRQK RPSPAN  AITAALASR
Sbjct: 294 DMANSVELGSGGSELIITRRSDDGISSKTLGSREYLRYYRQKLRPSPANGAAITAALASR 353

Query: 359 YKSMGLATVQTREHMVRMKVIKEMNRTGVEAMRTRVGMKNNIIRNLPKNVPY 410
           Y+SMGLATVQ++E MVRMKV+KEM R+GVEAMR+++GMK+N+IRNLPKN  Y
Sbjct: 354 YRSMGLATVQSKERMVRMKVLKEMRRSGVEAMRSKMGMKSNVIRNLPKNCTY 405

Source: Malus x domestica

Species: Malus x domestica

Genus: Malus

Family: Rosaceae

Order: Rosales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356563786|ref|XP_003550140.1| PREDICTED: zinc finger protein 622-like [Glycine max]

 Score =  589 bits (1518), Expect = e-165,   Method: Compositional matrix adjust.
 Identities = 300/412 (72%), Positives = 353/412 (85%), Gaps = 7/412 (1%)

Query: 1   MPGLTCNSCNREFNDDAEQKLHYKSDWHRYNLKRKVAGVPGVTEALFLARQAALAQEKNK 60
           MPGLTCN+CN EF DD EQKLHYKS+WHRYNLKRKVAGVPGVTEALFLARQ+ LAQEKNK
Sbjct: 1   MPGLTCNACNTEFKDDTEQKLHYKSEWHRYNLKRKVAGVPGVTEALFLARQSVLAQEKNK 60

Query: 61  -NATPMTYSCGLCGKGYRSSKALAQHLNSRSHIMRASQGTSNEEKEKVIIKPIPLRDVNK 119
              TPM Y+CGLCGK Y+SSKA A+HL SR H+MRAS+GTS+ + EK I+KP+P R VN+
Sbjct: 61  LGETPMLYTCGLCGKDYKSSKAHAEHLKSRGHMMRASEGTSHAD-EKAIVKPLPQRVVNR 119

Query: 120 PPRKREANNEESEDSDDEWEEVGPDEVLVSEATNSLTNLNVGSPADD-DLEEDDDDGAFE 178
           PP +RE +N E+E+S+DEWEEV P+E LV  A  SLT+LNV    ++ D+E DDD   FE
Sbjct: 120 PPPRREVDNSENEESEDEWEEVDPEEDLVDGAAKSLTDLNVNEHGENVDMEVDDD---FE 176

Query: 179 EFDPACCFMCDLPHDAIENCMVHMHKCHGFFIPDVEYLKDPKGLLTYLGLKVKRDFMCLY 238
           E DP+CCFMCD  H  IENCMVHMHK HGFFIPDVEYLKDPKGLLTYLGLKVKRD+MCLY
Sbjct: 177 ELDPSCCFMCDQEHKTIENCMVHMHKHHGFFIPDVEYLKDPKGLLTYLGLKVKRDYMCLY 236

Query: 239 CNDRCHPFNSLEAVRKHMEAKRHCKIHFGDGDDEEEAELEEFYDYSSSYMDEDGKQLISS 298
           CNDRC+PF+SLEAVRKHMEAK HCK+H+GDG D+EE ELEEFYDYSSSY+D+ GKQL++S
Sbjct: 237 CNDRCYPFSSLEAVRKHMEAKSHCKVHYGDGVDDEEVELEEFYDYSSSYVDDQGKQLVAS 296

Query: 299 SDMANTVELGGGSELIITKRTDKGTSTKTFGSREYLRYYRQKPRPSPANNVAITAALASR 358
            D +N VEL GGSELII++++   +STKT GSRE+LRYYRQKPRPS A N+AITAALASR
Sbjct: 297 CDASNNVELVGGSELIISRKSGDRSSTKTLGSREFLRYYRQKPRPSLA-NMAITAALASR 355

Query: 359 YKSMGLATVQTREHMVRMKVIKEMNRTGVEAMRTRVGMKNNIIRNLPKNVPY 410
           Y+SMGL T+Q+RE +VRMKV+KEMNR+GV+ MRT++ MK+N+IRNLPKNVPY
Sbjct: 356 YRSMGLTTIQSREKIVRMKVLKEMNRSGVDNMRTKMAMKSNVIRNLPKNVPY 407

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356539178|ref|XP_003538077.1| PREDICTED: zinc finger protein 622-like [Glycine max]

 Score =  582 bits (1500), Expect = e-163,   Method: Compositional matrix adjust.
 Identities = 301/412 (73%), Positives = 355/412 (86%), Gaps = 7/412 (1%)

Query: 1   MPGLTCNSCNREFNDDAEQKLHYKSDWHRYNLKRKVAGVPGVTEALFLARQAALAQEKNK 60
           MPGLTCN+CN EF DD EQKLHYKS+WHRYNLKRKVAGVPGVTEALFLARQ+ LAQEKNK
Sbjct: 1   MPGLTCNACNTEFKDDTEQKLHYKSEWHRYNLKRKVAGVPGVTEALFLARQSVLAQEKNK 60

Query: 61  -NATPMTYSCGLCGKGYRSSKALAQHLNSRSHIMRASQGTSNEEKEKVIIKPIPLRDVNK 119
              TPM YSCGLCGK Y+SSKA A+HL SR H+M+AS+GTS+ + EK I+KP+P R VN+
Sbjct: 61  LGETPMLYSCGLCGKDYKSSKAHAEHLKSRGHMMQASEGTSHAD-EKAIVKPLPQRVVNR 119

Query: 120 PPRKREANNEESEDSDDEWEEVGPDEVLVSEATNSLTNLNVGSPADD-DLEEDDDDGAFE 178
           PP +RE +N E+E+S+DEWEEV P+E LV  A  SLT+LNV    ++ D+E DDD   FE
Sbjct: 120 PPPRREVDNSENEESEDEWEEVDPEEDLVDGAAKSLTDLNVNEHGENVDMEVDDD---FE 176

Query: 179 EFDPACCFMCDLPHDAIENCMVHMHKCHGFFIPDVEYLKDPKGLLTYLGLKVKRDFMCLY 238
           E DP+CCFMCD  H +IENCMVHMHK HGFFIPDVEYLKDPKGLLTYLGLKVKRD+MCLY
Sbjct: 177 ELDPSCCFMCDQEHKSIENCMVHMHKHHGFFIPDVEYLKDPKGLLTYLGLKVKRDYMCLY 236

Query: 239 CNDRCHPFNSLEAVRKHMEAKRHCKIHFGDGDDEEEAELEEFYDYSSSYMDEDGKQLISS 298
           CNDRC+PF+SLEAVRKHMEAK HCK+H+GDGDD+EE EL+EFYDYSSSY+D+ GKQL++S
Sbjct: 237 CNDRCYPFSSLEAVRKHMEAKSHCKVHYGDGDDDEEVELDEFYDYSSSYVDDQGKQLVAS 296

Query: 299 SDMANTVELGGGSELIITKRTDKGTSTKTFGSREYLRYYRQKPRPSPANNVAITAALASR 358
            D +N VEL GGSELIIT ++ + +STKT GSRE+LRYYRQKPRPS A N+AITAALASR
Sbjct: 297 CDASNNVELVGGSELIITTKSGERSSTKTLGSREFLRYYRQKPRPSLA-NMAITAALASR 355

Query: 359 YKSMGLATVQTREHMVRMKVIKEMNRTGVEAMRTRVGMKNNIIRNLPKNVPY 410
           Y+SMGL T+Q+RE +VRMKV+KEMNR+GV+ MRT++ MK+N+IRNLPKNVPY
Sbjct: 356 YRSMGLTTIQSREKIVRMKVLKEMNRSGVDNMRTKMAMKSNVIRNLPKNVPY 407

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356563788|ref|XP_003550141.1| PREDICTED: zinc finger protein 622-like [Glycine max]

 Score =  578 bits (1490), Expect = e-162,   Method: Compositional matrix adjust.
 Identities = 299/412 (72%), Positives = 353/412 (85%), Gaps = 7/412 (1%)

Query: 1   MPGLTCNSCNREFNDDAEQKLHYKSDWHRYNLKRKVAGVPGVTEALFLARQAALAQEKNK 60
           MPGLTCN+CN +F DD EQKLHYKS+WHRYNLKRKVAGVPGVTEALFLARQ+ LAQEKNK
Sbjct: 1   MPGLTCNACNTKFKDDTEQKLHYKSEWHRYNLKRKVAGVPGVTEALFLARQSVLAQEKNK 60

Query: 61  -NATPMTYSCGLCGKGYRSSKALAQHLNSRSHIMRASQGTSNEEKEKVIIKPIPLRDVNK 119
              TPM Y+CGLCGK Y+SSKA A+HL SR H+MRAS+GTS+ + EK I+KP+P R VN+
Sbjct: 61  LGETPMLYTCGLCGKDYKSSKAHAEHLKSRGHMMRASEGTSHAD-EKAIVKPLPQRVVNR 119

Query: 120 PPRKREANNEESEDSDDEWEEVGPDEVLVSEATNSLTNLNVGSPADD-DLEEDDDDGAFE 178
           PP KRE +N E+E+S+DEWEEV P+E LV  A  SLT+LNV    ++ D+E DDD   FE
Sbjct: 120 PPPKREVDNSENEESEDEWEEVDPEEDLVDGAAKSLTDLNVNEHGENVDMEVDDD---FE 176

Query: 179 EFDPACCFMCDLPHDAIENCMVHMHKCHGFFIPDVEYLKDPKGLLTYLGLKVKRDFMCLY 238
           E DP+CCFMCD  H  IE+CMVHMHK HGFFIPDVEYLKDPKGLLTYLGLKVK+D+MCLY
Sbjct: 177 ELDPSCCFMCDQEHKTIEDCMVHMHKHHGFFIPDVEYLKDPKGLLTYLGLKVKKDYMCLY 236

Query: 239 CNDRCHPFNSLEAVRKHMEAKRHCKIHFGDGDDEEEAELEEFYDYSSSYMDEDGKQLISS 298
           CNDRC+PF+SLEAVRKHMEAK HCK+H+GDGDD+EE EL+EFYDYSSSY+D+ GKQL++S
Sbjct: 237 CNDRCYPFSSLEAVRKHMEAKSHCKVHYGDGDDDEEVELDEFYDYSSSYVDDQGKQLVAS 296

Query: 299 SDMANTVELGGGSELIITKRTDKGTSTKTFGSREYLRYYRQKPRPSPANNVAITAALASR 358
            D +N VEL GGSELIIT ++ +  STKT GSRE+LRYYRQKPRPS A N+AITAALASR
Sbjct: 297 CDASNNVELVGGSELIITTKSGERASTKTLGSREFLRYYRQKPRPSLA-NMAITAALASR 355

Query: 359 YKSMGLATVQTREHMVRMKVIKEMNRTGVEAMRTRVGMKNNIIRNLPKNVPY 410
           Y+SMGL T+Q+RE +VRMKV+KEMNR+GV+ MRT++ MK+N+IRNLPKNVPY
Sbjct: 356 YRSMGLTTIQSREKIVRMKVLKEMNRSGVDNMRTKMAMKSNVIRNLPKNVPY 407

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|388507466|gb|AFK41799.1| unknown [Lotus japonicus]

 Score =  575 bits (1482), Expect = e-161,   Method: Compositional matrix adjust.
 Identities = 293/412 (71%), Positives = 346/412 (83%), Gaps = 4/412 (0%)

Query: 1   MPGLTCNSCNREFNDDAEQKLHYKSDWHRYNLKRKVAGVPGVTEALFLARQAALAQEKNK 60
           MPGLTCN+CN EF DDA+QKLHYKS+WHRYNLKRKVAGVPGVTEALFLARQAALA+EK+K
Sbjct: 1   MPGLTCNACNTEFIDDADQKLHYKSEWHRYNLKRKVAGVPGVTEALFLARQAALAEEKDK 60

Query: 61  -NATPMTYSCGLCGKGYRSSKALAQHLNSRSHIMRASQGTSNEEKEKVIIKPIPLRDVNK 119
            N T M YSCGLCGKGY+SSKA A+HL SR H+MR S+GTS  + EK I+KP+P R  N+
Sbjct: 61  ANETAMLYSCGLCGKGYKSSKAHAEHLKSRGHLMRVSEGTSQSD-EKAIVKPLPQRSANR 119

Query: 120 PPRKREANNEESEDSDDEWEEVGPDEVLVSEATNSLTNLNVGSPADDDLEEDDDDGAFEE 179
           PP +RE    E  +S+DEWEEV P++ LV +A  SLT +NV   AD+D + D+DD    E
Sbjct: 120 PPPRREVQVSEDGESEDEWEEVDPEDDLVGDAAKSLTEMNVDEDADNDDDMDEDDDDTFE 179

Query: 180 FD-PACCFMCDLPHDAIENCMVHMHKCHGFFIPDVEYLKDPKGLLTYLGLKVKRDFMCLY 238
              PACCFMCD  H+ IENCMVHMHK HGFFIPD+EYLKDPKGLLTYLGLKVKRD+MCLY
Sbjct: 180 ELDPACCFMCDQGHNTIENCMVHMHKHHGFFIPDIEYLKDPKGLLTYLGLKVKRDYMCLY 239

Query: 239 CNDRCHPFNSLEAVRKHMEAKRHCKIHFGDGDDEEEAELEEFYDYSSSYMDEDGKQLISS 298
           CNDRC+PF+SLEAVRKHM AK HCK+HFGDGDDEEE ELE+FYDYSSSY DE G+QL+ S
Sbjct: 240 CNDRCYPFSSLEAVRKHMVAKSHCKVHFGDGDDEEEVELEDFYDYSSSYADEQGEQLVVS 299

Query: 299 SDMANTVELGGGSELIITKRTDKGTSTKTFGSREYLRYYRQKPRPSPANNVAITAALASR 358
            D  N +EL GGSEL+I++++   TST+T GSRE+LRYYRQKPRPSPA N+AITAALASR
Sbjct: 300 GDTTNNIELFGGSELVISRKSGDKTSTRTLGSREFLRYYRQKPRPSPA-NMAITAALASR 358

Query: 359 YKSMGLATVQTREHMVRMKVIKEMNRTGVEAMRTRVGMKNNIIRNLPKNVPY 410
           Y+SMGLATVQ+RE +VRMKV+K+M++TGVE MR+++GMK+N+IRNLPKN  Y
Sbjct: 359 YRSMGLATVQSREQIVRMKVLKQMSKTGVENMRSKMGMKSNVIRNLPKNCTY 410

Source: Lotus japonicus

Species: Lotus japonicus

Genus: Lotus

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|296081767|emb|CBI20772.3| unnamed protein product [Vitis vinifera]

 Score =  575 bits (1482), Expect = e-161,   Method: Compositional matrix adjust.
 Identities = 282/413 (68%), Positives = 325/413 (78%), Gaps = 40/413 (9%)

Query: 1   MPGLTCNSCNREFNDDAEQKLHYKSDWHRYNLKRKVAGVPGVTEALFLARQAALAQEKNK 60
           M  LTCN+CN+EF  +++QKLHYKSDWHRYNLKRK+AGVPGVTEAL+LARQ++LA+EKN+
Sbjct: 1   MATLTCNACNKEFIGESDQKLHYKSDWHRYNLKRKIAGVPGVTEALYLARQSSLAEEKNR 60

Query: 61  -NATPMTYSCGLCGKGYRSSKALAQHLNSRSHIMRASQGTSNEEKEKVIIKPIPLRDVNK 119
            N TPM YSC LCGKGYRSSKAL QHL SRSHI+RASQ  S++++E  IIKP+  R  NK
Sbjct: 61  LNETPMLYSCSLCGKGYRSSKALGQHLKSRSHILRASQRASHQDEETTIIKPLTHRTANK 120

Query: 120 PPRKREANNEESEDSDDEWEEVGPDEVLVSEATNSLTNLNVGSPADDDLEEDDDDGAFE- 178
           PP +RE  NEESED DD+                                       FE 
Sbjct: 121 PPPQREPVNEESEDDDDDD-------------------------------------DFEI 143

Query: 179 EFDPACCFMCDLPHDAIENCMVHMHKCHGFFIPDVEYLKDPKGLLTYLGLKVKRDFMCLY 238
           + DP CCFMCD   + IE C+VHMHK HGFFIPDVEYLKDPKGLLTYLGLKV RDFMCLY
Sbjct: 144 KLDPTCCFMCDQEQNTIERCIVHMHKQHGFFIPDVEYLKDPKGLLTYLGLKVTRDFMCLY 203

Query: 239 CNDRCHPFNSLEAVRKHMEAKRHCKIHFGDGDDEEEAELEEFYDYSSSYMDEDGKQLISS 298
           CND CHPFNSLEAVRKHM AK HCK+H+GDG D+EEAELEEFYDYSSSY+D D KQL++S
Sbjct: 204 CNDGCHPFNSLEAVRKHMVAKSHCKVHYGDGGDDEEAELEEFYDYSSSYVDVDEKQLVAS 263

Query: 299 SDMANTVELG-GGSELIITKRTDKGTSTKTFGSREYLRYYRQKPRPSPANNVAITAALAS 357
            DM NTVELG GGSELIIT+RTD G STK+ GSRE+LRYYRQKPRPSP N  AITAALAS
Sbjct: 264 GDMNNTVELGCGGSELIITRRTDGGISTKSLGSREFLRYYRQKPRPSPMNGAAITAALAS 323

Query: 358 RYKSMGLATVQTREHMVRMKVIKEMNRTGVEAMRTRVGMKNNIIRNLPKNVPY 410
           RY+SMGLATVQ+RE +VRMKV+K+MN++GVEAMR+++GMK+N+IRNLP NVPY
Sbjct: 324 RYRSMGLATVQSREQIVRMKVMKQMNKSGVEAMRSKIGMKSNVIRNLPNNVPY 376

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|388508652|gb|AFK42392.1| unknown [Lotus japonicus]

 Score =  573 bits (1477), Expect = e-161,   Method: Compositional matrix adjust.
 Identities = 292/412 (70%), Positives = 346/412 (83%), Gaps = 4/412 (0%)

Query: 1   MPGLTCNSCNREFNDDAEQKLHYKSDWHRYNLKRKVAGVPGVTEALFLARQAALAQEKNK 60
           MPGLTCN+CN EF DDA+QKLHYKS+WHRYNLKRKVAGVPGVTEALFLARQAALA+EK+K
Sbjct: 1   MPGLTCNACNTEFIDDADQKLHYKSEWHRYNLKRKVAGVPGVTEALFLARQAALAEEKDK 60

Query: 61  -NATPMTYSCGLCGKGYRSSKALAQHLNSRSHIMRASQGTSNEEKEKVIIKPIPLRDVNK 119
            N T M YSCGLCGKGY+SSKA A+HL SR H+MR S+GTS  + EK I+KP+P R  N+
Sbjct: 61  ANETAMLYSCGLCGKGYKSSKAHAEHLKSRGHLMRVSEGTSQSD-EKAIVKPLPQRSANR 119

Query: 120 PPRKREANNEESEDSDDEWEEVGPDEVLVSEATNSLTNLNVGSPADDDLEEDDDDGAFEE 179
           PP +RE    E  +S+DEWEEV P++ LV +A  SLT +NV   AD+D + D+DD    E
Sbjct: 120 PPPRREVQVSEDGESEDEWEEVDPEDDLVGDAAKSLTEMNVDEDADNDDDMDEDDDDTFE 179

Query: 180 FD-PACCFMCDLPHDAIENCMVHMHKCHGFFIPDVEYLKDPKGLLTYLGLKVKRDFMCLY 238
              PACCFMCD  H+ IENCMVHMHK HGFFIPD+EYLKDPKGLLTYLGLKVKRD+MCLY
Sbjct: 180 ELDPACCFMCDQGHNTIENCMVHMHKHHGFFIPDIEYLKDPKGLLTYLGLKVKRDYMCLY 239

Query: 239 CNDRCHPFNSLEAVRKHMEAKRHCKIHFGDGDDEEEAELEEFYDYSSSYMDEDGKQLISS 298
           CNDRC+PF+SLEAVRKHM AK HCK+HFGDGDDEEE ELE+FYDYSSSY+DE G+QL+ S
Sbjct: 240 CNDRCYPFSSLEAVRKHMVAKSHCKVHFGDGDDEEEVELEDFYDYSSSYVDEQGEQLVVS 299

Query: 299 SDMANTVELGGGSELIITKRTDKGTSTKTFGSREYLRYYRQKPRPSPANNVAITAALASR 358
            D  N +EL GG EL+I++++   TST+T GSRE+LRYYRQKPRPSPA N+AITAALASR
Sbjct: 300 GDTTNNIELFGGFELVISRKSGDKTSTRTLGSREFLRYYRQKPRPSPA-NMAITAALASR 358

Query: 359 YKSMGLATVQTREHMVRMKVIKEMNRTGVEAMRTRVGMKNNIIRNLPKNVPY 410
           Y+SMGLATVQ+RE +VRMKV+K+M++TGVE MR+++GMK+N+IRNLPKN  Y
Sbjct: 359 YRSMGLATVQSREQIVRMKVLKQMSKTGVENMRSKMGMKSNVIRNLPKNCTY 410

Source: Lotus japonicus

Species: Lotus japonicus

Genus: Lotus

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356539180|ref|XP_003538078.1| PREDICTED: zinc finger protein 622-like [Glycine max]

 Score =  556 bits (1432), Expect = e-156,   Method: Compositional matrix adjust.
 Identities = 294/411 (71%), Positives = 348/411 (84%), Gaps = 5/411 (1%)

Query: 1   MPGLTCNSCNREFNDDAEQKLHYKSDWHRYNLKRKVAGVPGVTEALFLARQAALAQEKNK 60
           MPGLTCN+CN EF DD EQKLHYKS+WHRYNLKRKVAGVPGVTEALFLARQ+ LAQEKNK
Sbjct: 1   MPGLTCNACNTEFKDDTEQKLHYKSEWHRYNLKRKVAGVPGVTEALFLARQSVLAQEKNK 60

Query: 61  -NATPMTYSCGLCGKGYRSSKALAQHLNSRSHIMRASQGTSNEEKEKVIIKPIPLRDVNK 119
              TPM Y CGLCGK Y+SSKA A+HL SR H+MRAS+GTS  + EK I+KP+P R VN+
Sbjct: 61  LGETPMLYCCGLCGKDYKSSKAHAEHLKSRGHMMRASEGTSQAD-EKAIVKPLPQRVVNR 119

Query: 120 PPRKREANNEESEDSDDEWEEVGPDEVLVSEATNSLTNLNVGSPADDDLEEDDDDGAFEE 179
           PP +RE +N E+E+S+DEWEEV P+E LV  A  SLT+LNV    ++   + ++D  FEE
Sbjct: 120 PPPRREVDNSENEESEDEWEEVDPEEDLVDGAAKSLTDLNVNEHGEN--VDMEEDDDFEE 177

Query: 180 FDPACCFMCDLPHDAIENCMVHMHKCHGFFIPDVEYLKDPKGLLTYLGLKVKRDFMCLYC 239
            DP+CCFMCD  H  IE+CMVHMHK HGFFIPDVEYLKDPKGLLTYLGLKVKRD+MCLYC
Sbjct: 178 LDPSCCFMCDQEHKTIEDCMVHMHKHHGFFIPDVEYLKDPKGLLTYLGLKVKRDYMCLYC 237

Query: 240 NDRCHPFNSLEAVRKHMEAKRHCKIHFGDGDDEEEAELEEFYDYSSSYMDEDGKQLISSS 299
           NDRC+PF+SLEAVRKHMEAK HCK+H+GDGDD+EE EL+EFYDYSSSY+D+ GKQL++S 
Sbjct: 238 NDRCYPFSSLEAVRKHMEAKSHCKVHYGDGDDDEEVELDEFYDYSSSYVDDQGKQLVASC 297

Query: 300 DMANTVELGGGSELIITKRTDKGTSTKTFGSREYLRYYRQKPRPSPANNVAITAALASRY 359
           D +N VEL GGSELIIT ++   +STKT GSRE+LRYYRQKPRPS A N+AITAALASRY
Sbjct: 298 DASNNVELAGGSELIITTKSGDRSSTKTLGSREFLRYYRQKPRPSLA-NMAITAALASRY 356

Query: 360 KSMGLATVQTREHMVRMKVIKEMNRTGVEAMRTRVGMKNNIIRNLPKNVPY 410
           +S+GL T+Q+RE +VRMKV+KEMNR+GV+ MRT++ MK+N+IRNLP NVPY
Sbjct: 357 RSLGLTTIQSREKIVRMKVLKEMNRSGVDNMRTKMAMKSNVIRNLPNNVPY 407

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	410
TAIR|locus:2128161	405	AT4G31420 [Arabidopsis thalian	0.978	0.990	0.545	2.3e-117
TAIR|locus:2061087	395	FZF [Arabidopsis thaliana (tax	0.960	0.997	0.532	5.3e-111
UNIPROTKB|F1N194	470	ZNF622 "Uncharacterized protei	0.514	0.448	0.311	8.5e-36
UNIPROTKB|F1LQ57	475	Fam134b "Protein FAM134B" [Rat	0.514	0.444	0.306	8e-35
FB|FBgn0030878	409	CG6769 [Drosophila melanogaste	0.490	0.491	0.333	1.3e-34
MGI|MGI:1289282	476	Zfp622 "zinc finger protein 62	0.509	0.439	0.303	2.4e-33
UNIPROTKB|E2R1D3	458	ZNF622 "Uncharacterized protei	0.514	0.460	0.297	3e-33
UNIPROTKB|D4A2K8	435	D4A2K8 "Uncharacterized protei	0.502	0.473	0.315	4.8e-32
UNIPROTKB|Q969S3	477	ZNF622 "Zinc finger protein 62	0.514	0.442	0.297	8e-32
ZFIN|ZDB-GENE-050927-1	471	znf622 "zinc finger protein 62	0.492	0.428	0.321	4.1e-30

TAIR|locus:2128161 AT4G31420 [Arabidopsis thaliana (taxid:3702)]

 Score = 1156 (412.0 bits), Expect = 2.3e-117, P = 2.3e-117
 Identities = 226/414 (54%), Positives = 280/414 (67%)

Query:     1 MPGLTCNSCNREFNDDAEQKLHYKSDWHRYNLKRKVAGVPGVTEXXXXXXXXXXXXEKNK 60
             MPGLTCN+CN EF D+ E+ LHYKSDWHRYNLKRKVAGVPGVTE            EKNK
Sbjct:     1 MPGLTCNACNMEFKDEEERNLHYKSDWHRYNLKRKVAGVPGVTEALFEARQSALAQEKNK 60

Query:    61 -NATPMTYSCGLCGKGYRSSKALAQHLNSRSHIMRASQGTS-NEEKEKVIIKPIPLRDVN 118
              N  PM Y+C +C KGYRSSKA  QHL SRSH++R SQGTS N E++  II+ +P     
Sbjct:    61 SNEAPMLYTCAICAKGYRSSKAHEQHLQSRSHVLRVSQGTSINGEEDIAIIRQLP----- 115

Query:   119 KPPRKREANNXXXXXXXXXXXXVGPDEVLVSE-ATNSLTNLNVGSPXXXXXXXXXXXXXX 177
                R+ +               V  DE L +E A++SL+ LNV                 
Sbjct:   116 ---RRVQHRGSIDDDSEDEWVEVDSDEELAAEEASDSLSKLNVNESGSAEDMDDDGDADK 172

Query:   178 XXXXPACCFMCDLPHDAIENCMVHMHKCHGFFIPDVEYLKDPKGLLTYLGLKVKRDFMCL 237
                 P CC MCD  H  +E+CM+HMHK HGFFIPD+EYLKDP+GLLTYLGLKVKRDFMCL
Sbjct:   173 YELDPTCCLMCDKKHKTLESCMLHMHKHHGFFIPDIEYLKDPEGLLTYLGLKVKRDFMCL 232

Query:   238 YCNDRCHPFNSLEAVRKHMEAKRHCKIHXXXXXXXXXXXXXXXXX-XSSSYMDEDGKQLI 296
             YCN+ C PF+SLEAVRKHMEAK HCK+H                   SSSY+DE GKQ++
Sbjct:   233 YCNELCRPFSSLEAVRKHMEAKSHCKLHYGDGDDEEDAELEEFYDYSSSSYVDEAGKQIV 292

Query:   297 SSSDMANTVELGGGSELIITKRTDKGTSTKTFGSREYLRYYRQKPRPSPANNVAITAALA 356
              S +  NTVEL GGSEL+IT++++  T++KT GSRE++RYYRQKPRP+  ++  I A+L+
Sbjct:   293 VSGETDNTVELVGGSELLITEKSENTTTSKTLGSREFMRYYRQKPRPTSQDSNQIIASLS 352

Query:   357 SRYKSMGLATVQTREHMVRMKVIKEMNRTGVEAMRTRVGMKNNIIRNLPKNVPY 410
             SRYKS+GL TV ++E  +RMKV KEM++ G E MRT++G+K+N+IRNLP NVPY
Sbjct:   353 SRYKSLGLKTVPSKEETLRMKVRKEMSKRG-ETMRTKIGVKSNVIRNLPNNVPY 405

GO:0005622 "intracellular" evidence=IEA

GO:0005634 "nucleus" evidence=ISM

GO:0008270 "zinc ion binding" evidence=IEA

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS

GO:0006355 "regulation of transcription, DNA-dependent" evidence=TAS

TAIR|locus:2061087 FZF [Arabidopsis thaliana (taxid:3702)]

 Score = 1096 (390.9 bits), Expect = 5.3e-111, P = 5.3e-111
 Identities = 219/411 (53%), Positives = 267/411 (64%)

Query:     1 MPGLTCNSCNREFNDDAEQKLHYKSDWHRYNLKRKVAGVPGVTEXXXXXXXXXXXXEKNK 60
             M GL CNSCN++F DDAEQK HYKS+WHRYNLKRK+AGVPGVTE            EK K
Sbjct:     1 MSGLACNSCNKDFEDDAEQKFHYKSEWHRYNLKRKIAGVPGVTEALFEARQAAIAQEKVK 60

Query:    61 NA-TPMTYSCGLCGKGYRSSKALAQHLNSRSHIMRASQGTSNEEKEKVIIKPIPLRDVNK 119
                 PM YSCG+C KGYRSSKA  QHL S+SH+++AS  TS  E++K IIK +P      
Sbjct:    61 AVEAPMLYSCGICNKGYRSSKAHEQHLKSKSHVLKAS--TSTGEEDKAIIKQLP------ 112

Query:   120 PPRKREANNXXXXXXXXXXXXVGPDEVLVSEATNSLTNLNVGSPXXXXXXXXXXXXXXXX 179
              PR+ E NN               DE +     +S  +L+                    
Sbjct:   113 -PRRVEKNNTAQLKGSIEEEE-SEDEWI---EVDSDEDLDAEMNEDGEEEDMDEDGIEFE 167

Query:   180 XXPACCFMCDLPHDAIENCMVHMHKCHGFFIPDVEYLKDPKGLLTYLGLKVKRDFMCLYC 239
               PACC MCD  H  IE CMVHMHK HGFFIPD+EYLKDPKG LTYLGLKVKRDF+CLYC
Sbjct:   168 LDPACCLMCDKKHKTIEKCMVHMHKFHGFFIPDIEYLKDPKGFLTYLGLKVKRDFVCLYC 227

Query:   240 NDRCHPFNSLEAVRKHMEAKRHCKIHXXXXXXXXXXXXXXXXXXSSSYMDEDGKQLISSS 299
             N+ CHPF+SLEAVRKHM+AK HCK+H                  SSSY++ D  Q++ S 
Sbjct:   228 NELCHPFSSLEAVRKHMDAKGHCKVHYGDGGDEEDAELEEFYDYSSSYVNGDENQMVVSG 287

Query:   300 DMANTVELGGGSELIITKRTDKGTSTKTFGSREYLRYYRQKPRPSPANNVAITAALASRY 359
             +  NTVEL GGSEL+ITKRTD   +++T GSRE++RYY+QKP PS   +  I  +L SRY
Sbjct:   288 ESVNTVELFGGSELVITKRTDNKVTSRTLGSREFMRYYKQKPAPSSQKH--IVNSLTSRY 345

Query:   360 KSMGLATVQTREHMVRMKVIKEMNRTGVEAMRTRVGMKNNIIRNLPKNVPY 410
             K MGLATVQ++E +VRMKV++EMN+ G ++   R+GMK+N+IRNLP NV Y
Sbjct:   346 KMMGLATVQSKEAIVRMKVMREMNKRGAKSS-VRLGMKSNVIRNLPNNVTY 395

GO:0005622 "intracellular" evidence=IEA

GO:0005634 "nucleus" evidence=ISM

GO:0008270 "zinc ion binding" evidence=IEA

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS

GO:0006355 "regulation of transcription, DNA-dependent" evidence=TAS

GO:0051604 "protein maturation" evidence=RCA

UNIPROTKB|F1N194 ZNF622 "Uncharacterized protein" [Bos taurus (taxid:9913)]

 Score = 247 (92.0 bits), Expect = 8.5e-36, Sum P(2) = 8.5e-36
 Identities = 70/225 (31%), Positives = 107/225 (47%)

Query:   185 CFMCDLPHDAIENCMVHMHKCHGFFIPDVEYLKDPKGLLTYLGLKVKRDFMCLYCNDRCH 244
             C  C     ++   + HM K H FFIPDVEYL D KGL+ YLG KV    +CL+CN+R  
Sbjct:   247 CLFCPHHSSSLTKNVAHMTKVHSFFIPDVEYLSDLKGLIKYLGEKVGVGKICLWCNERGK 306

Query:   245 PFNSLEAVRKHMEAKRHCKIHXXXXXXXXXXXXXXXXXXSSSYMD-EDGKQLISSSDMAN 303
              F S EAV+ HM  + HCK+                    SSY D ++G+    + ++ +
Sbjct:   307 SFYSTEAVQAHMNDRSHCKLFTDGDALLEFADFYDFR---SSYPDHKEGEDHDETEELPS 363

Query:   304 TVELGGGSELIITKRTDKGTSTKTFGSREYLRYYRQK---PRP-SPANNVAITAALASRY 359
                L    E   T      +  +  G R  +RYY+Q+    R  + A N      +  +Y
Sbjct:   364 EKTLDYDDE---TMELILPSGARV-GHRSLMRYYKQRFGLSRAVAVAKNRKAVGRVLQQY 419

Query:   360 KSMGLATVQTREHMVRMKVIKEMNRTGVEAMRTRVGMKNNIIRNL 404
             +++G  T  T   +VR + ++ + R   + M  ++GMKNN  R +
Sbjct:   420 RALGW-TGSTGAALVRQRDMQYVQRMKSKWM-LKMGMKNNATRQM 462

GO:0046330 "positive regulation of JNK cascade" evidence=IEA

GO:0043065 "positive regulation of apoptotic process" evidence=IEA

GO:0033674 "positive regulation of kinase activity" evidence=IEA

GO:0008631 "intrinsic apoptotic signaling pathway in response to oxidative stress" evidence=IEA

GO:0005794 "Golgi apparatus" evidence=IEA

GO:0005730 "nucleolus" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

GO:0003676 "nucleic acid binding" evidence=IEA

UNIPROTKB|F1LQ57 Fam134b "Protein FAM134B" [Rattus norvegicus (taxid:10116)]

 Score = 249 (92.7 bits), Expect = 8.0e-35, Sum P(2) = 8.0e-35
 Identities = 69/225 (30%), Positives = 107/225 (47%)

Query:   185 CFMCDLPHDAIENCMVHMHKCHGFFIPDVEYLKDPKGLLTYLGLKVKRDFMCLYCNDRCH 244
             C  C     ++   + HM K H FFIPD+EYL D KGL+ YLG KV    +CL+CN++  
Sbjct:   252 CLFCSHHSSSLVKNVAHMTKVHSFFIPDIEYLSDLKGLIKYLGEKVGVGKICLWCNEKGK 311

Query:   245 PFNSLEAVRKHMEAKRHCKIHXXXXXXXXXXXXXXXXXXSSSYMD-EDGKQLISSSDMAN 303
              F S EAV+ HM  K HCK+                    SSY D ++G+      D+++
Sbjct:   312 SFYSTEAVQAHMNDKSHCKLFTDGDAALEFADFYDFR---SSYPDYKEGQDPAEIEDLSS 368

Query:   304 TVELGGGSELIITKRTDKGTSTKTFGSREYLRYYRQK---PRP-SPANNVAITAALASRY 359
                L    E   T      +  +  G R  +RYY+Q+   PR  + A N      +  +Y
Sbjct:   369 EKILECDDE---TMELILPSGARV-GHRSLMRYYKQRFGLPRAVTVARNQKAVGRVLQQY 424

Query:   360 KSMGLATVQTREHMVRMKVIKEMNRTGVEAMRTRVGMKNNIIRNL 404
             +++G  T  T   ++R + ++ + R   + M  + GMKNN  + +
Sbjct:   425 RALGW-TGSTGAALMRERDMQYVQRMKSKWM-LKTGMKNNATKQM 467

GO:0003676 "nucleic acid binding" evidence=IEA

GO:0005730 "nucleolus" evidence=IEA

GO:0005794 "Golgi apparatus" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

GO:0008631 "intrinsic apoptotic signaling pathway in response to oxidative stress" evidence=IEA

GO:0033674 "positive regulation of kinase activity" evidence=IEA

GO:0043065 "positive regulation of apoptotic process" evidence=IEA

GO:0046330 "positive regulation of JNK cascade" evidence=IEA

FB|FBgn0030878 CG6769 [Drosophila melanogaster (taxid:7227)]

 Score = 251 (93.4 bits), Expect = 1.3e-34, Sum P(2) = 1.3e-34
 Identities = 74/222 (33%), Positives = 103/222 (46%)

Query:   184 CCFMCDLPHDAIENCMVHMHKCHGFFIPDVEYLKDPKGLLTYLGLKVKRDFMCLYCNDRC 243
             C F      D +EN + HM   H FFIPD EY  D +GLL YLG KV   F+CL+CNDR 
Sbjct:   191 CLFCTHASEDLVEN-LKHMSVAHSFFIPDTEYCTDIEGLLYYLGEKVANYFICLFCNDRG 249

Query:   244 HPFNSLEAVRKHMEAKRHCKIHXXXXXXXXXXXXXXXXXXSSSYMDEDGKQLISSSDMAN 303
               F SL+AVRKHM  K HC++                   SSSY D +    I    + +
Sbjct:   250 KTFYSLDAVRKHMIDKGHCQM---LHEGVALAEYAEYYDYSSSYPDNNEGMDIDEEVVPD 306

Query:   304 TVELGGGSELIITKRTDKGTSTKTFGSREYLRYYRQKPRPSPANNVAITAA------LAS 357
              ++ G   +L++        S    G R  LRYY+Q+ RP  A  V I  +      + S
Sbjct:   307 LLD-GDEYQLVLP-------SGAVIGHRSLLRYYKQRLRPERA--VVIKKSDRKLHRVLS 356

Query:   358 RYKSMGLATVQTREHMVRMKVIKEMNRTGVEAMRTRVGMKNN 399
              Y+++G    Q      + + I  M R   +  + ++G K N
Sbjct:   357 EYRALGWTQTQQLSAARKARDIHLMKRVQSK-WQMKLGCKAN 397

GO:0003676 "nucleic acid binding" evidence=IEA

GO:0005622 "intracellular" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

MGI|MGI:1289282 Zfp622 "zinc finger protein 622" [Mus musculus (taxid:10090)]

 Score = 242 (90.2 bits), Expect = 2.4e-33, Sum P(2) = 2.4e-33
 Identities = 69/227 (30%), Positives = 108/227 (47%)

Query:   185 CFMCDLPHDAIENCMVHMHKCHGFFIPDVEYLKDPKGLLTYLGLKVKRDFMCLYCNDRCH 244
             C  C     ++   + HM K H FFIPD+EYL D KGL+ YLG KV    +CL+CN++  
Sbjct:   253 CLFCSHHSSSLVKNVAHMTKVHSFFIPDIEYLSDLKGLIKYLGEKVGVGKICLWCNEKGK 312

Query:   245 PFNSLEAVRKHMEAKRHCKIHXXXXXXXXXXXXXXXXXXSSSYMD-EDGKQLIS-SSDMA 302
              F S EAV+ HM  K HCK+                      Y + +D  +L + S+D  
Sbjct:   313 SFYSTEAVQAHMNDKSHCKLFTDGDAALEFADFYDFRSSYPDYKEGQDPAELEALSTD-- 370

Query:   303 NTVELGGGS-ELIITKRTDKGTSTKTFGSREYLRYYRQK---PRP-SPANNVAITAALAS 357
               +E    + ELI+        S    G R  +RYY+Q+   PR  + A N      +  
Sbjct:   371 KILECDDETMELILP-------SGARVGHRSLMRYYKQRFGLPRAVTVARNQKAVGRVLQ 423

Query:   358 RYKSMGLATVQTREHMVRMKVIKEMNRTGVEAMRTRVGMKNNIIRNL 404
             +Y+++G     T   ++R + ++ + R   + M  ++GMKNN  + +
Sbjct:   424 QYRALGWMG-STGAALMRERDMQYVQRMKSKWM-LKIGMKNNATKQM 468

GO:0003676 "nucleic acid binding" evidence=IEA

GO:0005622 "intracellular" evidence=IEA

GO:0005634 "nucleus" evidence=IEA

GO:0005737 "cytoplasm" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

GO:0008631 "intrinsic apoptotic signaling pathway in response to oxidative stress" evidence=ISO

GO:0033674 "positive regulation of kinase activity" evidence=ISO

GO:0043065 "positive regulation of apoptotic process" evidence=ISO

GO:0043410 "positive regulation of MAPK cascade" evidence=ISO

GO:0046330 "positive regulation of JNK cascade" evidence=ISO

GO:0046872 "metal ion binding" evidence=IEA

UNIPROTKB|E2R1D3 ZNF622 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 241 (89.9 bits), Expect = 3.0e-33, Sum P(2) = 3.0e-33
 Identities = 67/225 (29%), Positives = 100/225 (44%)

Query:   185 CFMCDLPHDAIENCMVHMHKCHGFFIPDVEYLKDPKGLLTYLGLKVKRDFMCLYCNDRCH 244
             C  C     ++   + HM K H FFIPD+EYL D KGL+ YLG KV    +CL+CN++  
Sbjct:   238 CLFCPHHSSSLMKNVAHMTKVHSFFIPDIEYLSDLKGLIKYLGEKVGVGKICLWCNEKGK 297

Query:   245 PFNSLEAVRKHMEAKRHCKIHXXXXXXXXXXXXXXXXXXSSSYMDEDGKQLISSSDMANT 304
              F S EAV+ HM  K HCK+                      Y + D            T
Sbjct:   298 SFYSTEAVQAHMNDKSHCKLFTDGNAALEFADFYDFRSSYPDYKEGDHPDETEELPSEKT 357

Query:   305 VELGGGS-ELIITKRTDKGTSTKTFGSREYLRYYRQK---PRP-SPANNVAITAALASRY 359
             VE    + ELI+        S    G R  +RYY+Q+    R  + A N      +  +Y
Sbjct:   358 VEYDDETMELILP-------SGARVGHRSLMRYYKQRFGLSRAVAVAKNQKAVGRILQQY 410

Query:   360 KSMGLATVQTREHMVRMKVIKEMNRTGVEAMRTRVGMKNNIIRNL 404
             +++G  T  T   ++  + ++ + R   + M  + GMKNN  + +
Sbjct:   411 RALGW-TGSTGAALLHERDMQYVQRMKSKWM-LKTGMKNNATKQM 453

GO:0008270 "zinc ion binding" evidence=IEA

GO:0005622 "intracellular" evidence=IEA

GO:0003676 "nucleic acid binding" evidence=IEA

UNIPROTKB|D4A2K8 D4A2K8 "Uncharacterized protein" [Rattus norvegicus (taxid:10116)]

 Score = 252 (93.8 bits), Expect = 4.8e-32, Sum P(2) = 4.8e-32
 Identities = 71/225 (31%), Positives = 107/225 (47%)

Query:   185 CFMCDLPHDAIENCMVHMHKCHGFFIPDVEYLKDPKGLLTYLGLKVKRDFMCLYCNDRCH 244
             C  C     ++   + HM K H FFIPD+EYL D KGL+ YLG KV    +CL+CN++  
Sbjct:   217 CLFCSHHSSSLVKNVAHMTKVHSFFIPDIEYLSDLKGLIKYLGEKVGAGKICLWCNEKGK 276

Query:   245 PFNSLEAVRKHMEAKRHCKIHXXXXXXXXXXXXXXXXXXSSSYMD-EDGKQLISSSDMAN 303
              F S EAV+ HM  K HCK+                    SSY D ++G+      D++ 
Sbjct:   277 SFYSTEAVQAHMNDKSHCKLFTDGDAVLEFADFYDFR---SSYPDYKEGQDPAEIEDLSL 333

Query:   304 TVELGGGSELIITKRTDKGTSTKTFGSREYLRYYRQK---PRP-SPANNVAITAALASRY 359
               +     ELII        S    G R  +RYY+Q+   PR  + A N      +  +Y
Sbjct:   334 ECD-DETMELIIP-------SGARVGHRSLMRYYKQRFGLPRAVTVARNQKAVGRVLQQY 385

Query:   360 KSMGLATVQTREHMVRMKVIKEMNRTGVEAMRTRVGMKNNIIRNL 404
             +++G  T  T   ++R + ++ + R     ++T  GMKNN  + +
Sbjct:   386 RALGW-TGSTGAALMRERDMQYVQRKSKWMLKT--GMKNNATKQM 427

GO:0005622 "intracellular" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

UNIPROTKB|Q969S3 ZNF622 "Zinc finger protein 622" [Homo sapiens (taxid:9606)]

 Score = 236 (88.1 bits), Expect = 8.0e-32, Sum P(2) = 8.0e-32
 Identities = 67/225 (29%), Positives = 106/225 (47%)

Query:   185 CFMCDLPHDAIENCMVHMHKCHGFFIPDVEYLKDPKGLLTYLGLKVKRDFMCLYCNDRCH 244
             C  C     ++   + HM K H FFIPD+EYL D KGL+ YLG KV    +CL+CN++  
Sbjct:   254 CLFCSHHSSSLMKNVAHMTKDHSFFIPDIEYLSDIKGLIKYLGEKVGVGKICLWCNEKGK 313

Query:   245 PFNSLEAVRKHMEAKRHCKIHXXXXXXXXXXXXXXXXXXSSSYMD-EDGKQLISSSDMAN 303
              F S EAV+ HM  K HCK+                    SSY D ++G+    + ++ +
Sbjct:   314 SFYSTEAVQAHMNDKSHCKLFTDGDAALEFADFYDFR---SSYPDHKEGEDPNKAEELPS 370

Query:   304 TVELGGGSELIITKRTDKGTSTKTFGSREYLRYYRQK---PRP-SPANNVAITAALASRY 359
                L    E   T      +  +  G R  +RYY+Q+    R  + A N      +  +Y
Sbjct:   371 EKNLEYDDE---TMELILPSGARV-GHRSLMRYYKQRFGLSRAVAVAKNRKAVGRVLQQY 426

Query:   360 KSMGLATVQTREHMVRMKVIKEMNRTGVEAMRTRVGMKNNIIRNL 404
             +++G  T  T   ++R + ++ + R   + M  + GMKNN  + +
Sbjct:   427 RALGW-TGSTGAALMRERDMQYVQRMKSKWM-LKTGMKNNATKQM 469

GO:0003676 "nucleic acid binding" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

GO:0046330 "positive regulation of JNK cascade" evidence=IMP

GO:0043410 "positive regulation of MAPK cascade" evidence=IDA

GO:0043065 "positive regulation of apoptotic process" evidence=IDA

GO:0033674 "positive regulation of kinase activity" evidence=IDA

GO:0008631 "intrinsic apoptotic signaling pathway in response to oxidative stress" evidence=IDA

GO:0005515 "protein binding" evidence=IPI

GO:0005730 "nucleolus" evidence=IDA

GO:0005737 "cytoplasm" evidence=IDA

GO:0005794 "Golgi apparatus" evidence=IDA

ZFIN|ZDB-GENE-050927-1 znf622 "zinc finger protein 622" [Danio rerio (taxid:7955)]

 Score = 226 (84.6 bits), Expect = 4.1e-30, Sum P(2) = 4.1e-30
 Identities = 73/227 (32%), Positives = 108/227 (47%)

Query:   185 CFMCDLPHDAIENCMVHMHKCHGFFIPDVEYLKDPKGLLTYLGLKVKRDFMCLYCNDRCH 244
             C  C     ++   + HM K H FFIPD+EYL D +GL++YLG KV    +CL+CN++  
Sbjct:   245 CLFCGHHSHSLSRNVTHMTKTHSFFIPDIEYLVDLRGLMSYLGEKVGVGKVCLWCNEKGK 304

Query:   245 PFNSLEAVRKHMEAKRHCKIHXXXXXXXXXXXXXXXXXXSSSYMD-EDGKQL-ISSSDMA 302
              F S EAV+ HM  K HCK+                    SSY D +DG  + +   ++ 
Sbjct:   305 SFYSTEAVQAHMTDKSHCKLFTDGDAALEFADFYDFR---SSYPDAKDGVDVEMKDGELP 361

Query:   303 N--TVELGGGSELIITKRTDKGTSTKTFGSREYLRYYRQK---PRPS-PANNVAITAALA 356
             +  TVE    + L +T       S    G R  +RYY+Q+    R   PA+N      + 
Sbjct:   362 DDKTVEFDDET-LELTL-----PSGAKIGHRSLMRYYKQRFGVQRALVPAHNQKAVGRVL 415

Query:   357 SRYKSMGLATVQTREHMVRMKVIKEMNRTGVEAMRT----RVGMKNN 399
              +YK++G  T    +  V  +  K+M    V+ M++    R GM NN
Sbjct:   416 KQYKALGW-TGDFGKGFVSQQQ-KDMQY--VQRMKSKWMLRTGMGNN 458

GO:0003676 "nucleic acid binding" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

GO:0005622 "intracellular" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	410
pfam12756	100	pfam12756, zf-C2H2_2, C2H2 type zinc-finger (2 cop	1e-39
PTZ00448	373	PTZ00448, PTZ00448, hypothetical protein; Provisio	0.002

>gnl|CDD|221755 pfam12756, zf-C2H2_2, C2H2 type zinc-finger (2 copies)

 Score =  137 bits (346), Expect = 1e-39
 Identities = 51/104 (49%), Positives = 65/104 (62%), Gaps = 5/104 (4%)

Query: 184 CCFMCDLPHDAIENCMVHMHKCHGFFIPDVEYLKDPKGLLTYLGLKVKRDFMCLYCNDRC 243
            C  C+   D +E  + HM K HGFFIP+ EYL D +GLL YL  K+     CLYC  + 
Sbjct: 1   DCLFCNHTSDTVEENLEHMFKSHGFFIPEREYLVDLEGLLNYLREKIHEGNECLYCGKQ- 59

Query: 244 HPFNSLEAVRKHMEAKRHCKIHFGDGDDEEEAELEEFYDYSSSY 287
             F SLEA+R+HM  K HCKI +    +EE+ E+ EFYD+SSSY
Sbjct: 60  --FKSLEALRQHMRDKGHCKIPY--ETEEEKDEIAEFYDFSSSY 99

This family contains two copies of a C2H2-like zinc finger domain. Length = 100

>gnl|CDD|185627 PTZ00448, PTZ00448, hypothetical protein; Provisional

 Score = 39.2 bits (91), Expect = 0.002
 Identities = 18/48 (37%), Positives = 25/48 (52%)

Query: 4   LTCNSCNREFNDDAEQKLHYKSDWHRYNLKRKVAGVPGVTEALFLARQ 51
           L C  CN +  D    K HY+S+WH +N KR    +  ++E  FL  Q
Sbjct: 315 LLCRKCNIQLMDHNAFKQHYRSEWHIFNTKRNARKMEPISEEEFLELQ 362

Length = 373

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	410
KOG2785	390	consensus C2H2-type Zn-finger protein [General fun	100.0
PF12756	100	zf-C2H2_2: C2H2 type zinc-finger (2 copies); PDB:	99.75
PTZ00448	373	hypothetical protein; Provisional	99.66
KOG2482	423	consensus Predicted C2H2-type Zn-finger protein [T	99.58
KOG2462	279	consensus C2H2-type Zn-finger protein [Transcripti	99.26
KOG2482	423	consensus Predicted C2H2-type Zn-finger protein [T	99.15
KOG2462	279	consensus C2H2-type Zn-finger protein [Transcripti	99.1
KOG2505	591	consensus Ankyrin repeat protein [General function	99.02
KOG1074	958	consensus Transcriptional repressor SALM [Transcri	98.76
KOG1074	958	consensus Transcriptional repressor SALM [Transcri	98.75
KOG3608	467	consensus Zn finger proteins [General function pre	98.45
KOG3576	267	consensus Ovo and related transcription factors [T	98.38
PF12756	100	zf-C2H2_2: C2H2 type zinc-finger (2 copies); PDB:	98.24
KOG3608	467	consensus Zn finger proteins [General function pre	98.17
KOG3623	1007	consensus Homeobox transcription factor SIP1 [Tran	98.15
KOG3576	267	consensus Ovo and related transcription factors [T	97.96
KOG3623	1007	consensus Homeobox transcription factor SIP1 [Tran	97.81
PF12171	27	zf-C2H2_jaz: Zinc-finger double-stranded RNA-bindi	97.76
PHA00733	128	hypothetical protein	97.69
PF12874	25	zf-met: Zinc-finger of C2H2 type; PDB: 1ZU1_A 2KVG	97.64
PHA02768	55	hypothetical protein; Provisional	97.6
PHA02768	55	hypothetical protein; Provisional	97.57
PHA00732	79	hypothetical protein	97.39
PHA00732	79	hypothetical protein	97.26
smart00451	35	ZnF_U1 U1-like zinc finger. Family of C2H2-type zi	97.23
smart00451	35	ZnF_U1 U1-like zinc finger. Family of C2H2-type zi	97.18
PHA00733	128	hypothetical protein	97.13
KOG3993	500	consensus Transcription factor (contains Zn finger	97.04
PHA00616	44	hypothetical protein	97.01
PLN03086	567	PRLI-interacting factor K; Provisional	97.01
PF12171	27	zf-C2H2_jaz: Zinc-finger double-stranded RNA-bindi	96.75
PF13912	27	zf-C2H2_6: C2H2-type zinc finger; PDB: 1JN7_A 1FU9	96.55
PF00096	23	zf-C2H2: Zinc finger, C2H2 type; InterPro: IPR0070	96.55
PF13894	24	zf-C2H2_4: C2H2-type zinc finger; PDB: 2ELX_A 2EPP	96.38
PF13912	27	zf-C2H2_6: C2H2-type zinc finger; PDB: 1JN7_A 1FU9	96.32
PF05605	54	zf-Di19: Drought induced 19 protein (Di19), zinc-b	96.16
PF12874	25	zf-met: Zinc-finger of C2H2 type; PDB: 1ZU1_A 2KVG	96.15
KOG0717	508	consensus Molecular chaperone (DnaJ superfamily) [	95.96
KOG3993	500	consensus Transcription factor (contains Zn finger	95.81
PF00096	23	zf-C2H2: Zinc finger, C2H2 type; InterPro: IPR0070	95.78
PF13894	24	zf-C2H2_4: C2H2-type zinc finger; PDB: 2ELX_A 2EPP	95.75
PHA00616	44	hypothetical protein	95.66
PF13465	26	zf-H2C2_2: Zinc-finger double domain; PDB: 2EN7_A	95.55
PF05605	54	zf-Di19: Drought induced 19 protein (Di19), zinc-b	95.55
PF13465	26	zf-H2C2_2: Zinc-finger double domain; PDB: 2EN7_A	95.41
KOG3408	129	consensus U1-like Zn-finger-containing protein, pr	95.16
PF13909	24	zf-H2C2_5: C2H2-type zinc-finger domain; PDB: 1X5W	94.6
COG5189	423	SFP1 Putative transcriptional repressor regulating	94.28
KOG1146	1406	consensus Homeobox protein [General function predi	94.07
PLN03086	567	PRLI-interacting factor K; Provisional	93.96
smart00355	26	ZnF_C2H2 zinc finger.	93.5
KOG3408	129	consensus U1-like Zn-finger-containing protein, pr	93.13
KOG2785	390	consensus C2H2-type Zn-finger protein [General fun	92.9
KOG2231	669	consensus Predicted E3 ubiquitin ligase [Posttrans	92.01
smart00355	26	ZnF_C2H2 zinc finger.	91.8
KOG2231	669	consensus Predicted E3 ubiquitin ligase [Posttrans	90.67
PF09237	54	GAGA: GAGA factor; InterPro: IPR015318 Zinc finger	89.64
KOG1146	1406	consensus Homeobox protein [General function predi	84.85
KOG4173	253	consensus Alpha-SNAP protein [Intracellular traffi	84.13
PF12013	109	DUF3505: Protein of unknown function (DUF3505); In	83.69
COG5236	493	Uncharacterized conserved protein, contains RING Z	82.74
COG5236	493	Uncharacterized conserved protein, contains RING Z	82.38
COG5112	126	UFD2 U1-like Zn-finger-containing protein [General	81.47
PLN02748	468	tRNA dimethylallyltransferase	81.38
PF13821	55	DUF4187: Domain of unknown function (DUF4187)	80.73
PF06220	38	zf-U1: U1 zinc finger; InterPro: IPR013085 Zinc fi	80.45

>KOG2785 consensus C2H2-type Zn-finger protein [General function prediction only]

Probab=100.00  E-value=1.2e-94  Score=707.27  Aligned_cols=380  Identities=40%  Similarity=0.653  Sum_probs=289.1

Q ss_pred             CCCCcccccccccCChHHHhhhhhhccccchhhhhhcCCCCCCHHHHHHHHHHHHHhhhc--CCCCCcccccCcCCccCC
Q 015261            1 MPGLTCNSCNREFNDDAEQKLHYKSDWHRYNLKRKVAGVPGVTEALFLARQAALAQEKNK--NATPMTYSCGLCGKGYRS   78 (410)
Q Consensus         1 ~~~ftC~~C~~~F~~~~~qr~H~ksdwHrYNlKRrva~Lppvs~~~F~~k~~~l~~~~~~--~~~~~~~~C~~C~K~f~s   78 (410)
                      |+.|||++|.++|.+++.||.||||||||||||||||+|||||+++|+.++.+.......  .+++..+.|.+|+|+|.+
T Consensus         1 st~ftC~tC~v~F~~ad~Qr~HyKSdWHRYNLKRkVA~lPPItaE~F~~k~~s~~~~~~~~~e~~~~~~~c~~c~k~~~s   80 (390)
T KOG2785|consen    1 STGFTCNTCNVEFDDADEQRAHYKSDWHRYNLKRKVASLPPITAEEFNEKVLSDDSEKEENLEEAESVVYCEACNKSFAS   80 (390)
T ss_pred             CCcceeeceeeeeccHHHHHHHhhhhHHHhhHHhHhhcCCCcCHHHHhHHHhhhhhhhhhhhhhcccceehHHhhccccC
Confidence            789999999999999999999999999999999999999999999999999876544433  456778999999999999


Q ss_pred             hHHHHHHHhhhhhhhhhccCCCchhhhhhhccCCCCCCCCCCCCccccCCCCCCCCcccccccCcchhhhhhhccccccc
Q 015261           79 SKALAQHLNSRSHIMRASQGTSNEEKEKVIIKPIPLRDVNKPPRKREANNEESEDSDDEWEEVGPDEVLVSEATNSLTNL  158 (410)
Q Consensus        79 ~~~l~~Hl~skkHk~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~ee~~~~e~~~~~~~~~~~~~  158 (410)
                      .+++.+||.||+|+.+..+.....+.+.+.+...+.+.+..    ...    -.+.+..|-|.+.++       ++..+.
T Consensus        81 ~~a~~~hl~Sk~h~~~~~~~~r~~e~d~a~~~q~~~~~p~~----l~~----~~e~e~~~~E~~~~~-------d~~~e~  145 (390)
T KOG2785|consen   81 PKAHENHLKSKKHVENLSNHQRSEEGDSAKISQLPSRRPSN----LQN----KGESELKWYEVDSDE-------DSSEEE  145 (390)
T ss_pred             hhhHHHHHHHhhcchhhhhhhccccccchhhhhccccCccc----ccc----CCCcccchhhccccc-------ccchhh
Confidence            99999999999999987765432222222333332221100    000    001223444333221       000000


Q ss_pred             CCCCCCCCCCccCCCCCCCCCCCCcccCCCCCCCCChhHHhhhhhhhhcCCCCCcccccChHHHHHHHHhHhcCCccccc
Q 015261          159 NVGSPADDDLEEDDDDGAFEEFDPACCFMCDLPHDAIENCMVHMHKCHGFFIPDVEYLKDPKGLLTYLGLKVKRDFMCLY  238 (410)
Q Consensus       159 ~~~~~~~~~~~~~~~~~~~~~i~p~~ClfC~~~f~~~~~~~~HM~~~Hgf~ip~~~~lvd~~gLl~yl~~ki~~~~~Cl~  238 (410)
                      ..  ++..++++++ .+...+..|+.||||++.|++++.|+.||+.+||||||+++||+|+.|||.||++||+.+++||+
T Consensus       146 ~~--dd~~Edi~~d-~~~e~e~~Pt~CLfC~~~~k~~e~~~~HM~~~HgffIPdreYL~D~~GLl~YLgeKV~~~~~CL~  222 (390)
T KOG2785|consen  146 EE--DDEEEDIEED-GDDEDELIPTDCLFCDKKSKSLEENLKHMFKEHGFFIPDREYLTDEKGLLKYLGEKVGIGFICLF  222 (390)
T ss_pred             cc--Ccchhhhhhc-cchhcccCCcceeecCCCcccHHHHHHHHhhccCCcCCchHhhhchhHHHHHHHHHhccCceEEE
Confidence            00  0001111111 11223445699999999999999999999999999999999999999999999999999999999


Q ss_pred             cCCCCcccCCHHHHHHHHHhcCCcccCCCCCCchHHHhhhhhcCccCcCcCccccccccccCCCCceee--cC-ceeEEE
Q 015261          239 CNDRCHPFNSLEAVRKHMEAKRHCKIHFGDGDDEEEAELEEFYDYSSSYMDEDGKQLISSSDMANTVEL--GG-GSELII  315 (410)
Q Consensus       239 C~~~gk~F~s~~alr~HM~~k~HCki~ye~~~~ee~~E~~dFYDFs~sy~d~~~~~~~~~~~~~~~~~l--~~-g~eL~L  315 (410)
                      ||..|+.|+|+++||+||.+|+||||+| ++  |+++||++|||||+||+|..+.+.+...++.+++.+  .+ -+||+|
T Consensus       223 CN~~~~~f~sleavr~HM~~K~HCkl~y-d~--ee~~El~efYDfsssY~d~~~~~~~~~~e~~~~~~l~~g~~~~el~l  299 (390)
T KOG2785|consen  223 CNELGRPFSSLEAVRAHMRDKGHCKLPY-DG--EERLELAEFYDFSSSYPDIAENQDPDSAEEDPTDELEGGDELYELTL  299 (390)
T ss_pred             eccccCcccccHHHHHHHhhccCcccCC-Ch--HHHhhhhhhhcCcccccCcccCCCCcchhcCCcccccccceeeeeec
Confidence            9999999999999999999999999999 54  899999999999999999765555443443334444  22 279999


Q ss_pred             ecCCCCCCCcceeeccccccccccCCCCCCCch----HHHHHHHHHhhhhcccchhhhHHHHHHHHHHHHHHhhhhhhhh
Q 015261          316 TKRTDKGTSTKTFGSREYLRYYRQKPRPSPANN----VAITAALASRYKSMGLATVQTREHMVRMKVIKEMNRTGVEAMR  391 (410)
Q Consensus       316 ~~~~~~~psG~~iGHRs~~rYYrQ~l~~~~~~~----~~~~~~~~~~~~~~g~~~~~~~~~~~~~k~~~~~~~~~~~~~~  391 (410)
                             |||++||||+|+|||||||+|++...    .+++.+.+..|+++||++.+...+....++++.++|.+ .+|.
T Consensus       300 -------psga~vGhRsl~RYykQ~l~p~~~~~~~~~r~~~~~~~~~~~a~~~t~~~~~~~k~~~~~~k~v~R~~-~r~~  371 (390)
T KOG2785|consen  300 -------PSGARVGHRSLMRYYKQNLRPSSAVVRLVSRRALSRVKRFYPALGWTGTTGVRAKMQARDMKFVERGR-RRFA  371 (390)
T ss_pred             -------ccccccccHHHHHHHhhcCCCcchHHHHHHHHHHHHHHHhhhcccchhhHHHHHHHHHHHHHHHHHHH-HHHH
Confidence                   99999999999999999999998643    33344566778899999988765555556666666654 6799


Q ss_pred             hhhccccccccCCCCCCC
Q 015261          392 TRVGMKNNIIRNLPKNVP  409 (410)
Q Consensus       392 ~k~g~k~N~~~~~~~~~~  409 (410)
                      ++|||++|..+||+-++-
T Consensus       372 ~~~g~k~n~~~~~~~~~~  389 (390)
T KOG2785|consen  372 LRVGMKNNYRDQLHQRVQ  389 (390)
T ss_pred             HHhcchhhHHHHHhhhhc
Confidence            999999999999987664

>PF12756 zf-C2H2_2: C2H2 type zinc-finger (2 copies); PDB: 2DMI_A

Probab=99.75  E-value=3.3e-19  Score=146.48  Aligned_cols=99  Identities=45%  Similarity=0.832  Sum_probs=28.3

Q ss_pred             ccCCCCCCCCChhHHhhhhhhhhcCCCCCcccccChHHHHHHHHhHhcCCccccccCCCCcccCCHHHHHHHHHhcCCcc
Q 015261          184 CCFMCDLPHDAIENCMVHMHKCHGFFIPDVEYLKDPKGLLTYLGLKVKRDFMCLYCNDRCHPFNSLEAVRKHMEAKRHCK  263 (410)
Q Consensus       184 ~ClfC~~~f~~~~~~~~HM~~~Hgf~ip~~~~lvd~~gLl~yl~~ki~~~~~Cl~C~~~gk~F~s~~alr~HM~~k~HCk  263 (410)
                      +|+||+..|++...++.||...|+|.+|+..++++..+|+.|+..++...+.|.+|+   +.|.+..+|+.||+.++|++
T Consensus         1 ~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~~~l~~~~~~~~~~~~~~~~~~~C~~C~---~~f~s~~~l~~Hm~~~~H~~   77 (100)
T PF12756_consen    1 QCLFCDESFSSVDDLLQHMKKKHGFDIPDQKYLVDPNRLLNYLRKKVKESFRCPYCN---KTFRSREALQEHMRSKHHKK   77 (100)
T ss_dssp             ------------------------------------------------SSEEBSSSS----EESSHHHHHHHHHHTTTTC
T ss_pred             CccccccccccccccccccccccccccccccccccccccccccccccCCCCCCCccC---CCCcCHHHHHHHHcCccCCC
Confidence            599999999999999999999999999999999999999999999998889999999   99999999999999999999


Q ss_pred             cCCCCCCchHHHhhhhhcCc-cCcC
Q 015261          264 IHFGDGDDEEEAELEEFYDY-SSSY  287 (410)
Q Consensus       264 i~ye~~~~ee~~E~~dFYDF-s~sy  287 (410)
                      +.++.+  ....++..|||| +.+|
T Consensus        78 ~~~~~~--~~~~~~~~~y~~~~~~~  100 (100)
T PF12756_consen   78 RNSESE--ESWEEFEKFYDFWSNDY  100 (100)
T ss_dssp             -S-----------------------
T ss_pred             cccccc--cccccccccccccccCC
Confidence            988653  668899999999 6654

>PTZ00448 hypothetical protein; Provisional

Probab=99.66  E-value=3.1e-17  Score=162.53  Aligned_cols=51  Identities=35%  Similarity=0.648  Sum_probs=48.9

Q ss_pred             CCcccccccccCChHHHhhhhhhccccchhhhhhcCCCCCCHHHHHHHHHH
Q 015261            3 GLTCNSCNREFNDDAEQKLHYKSDWHRYNLKRKVAGVPGVTEALFLARQAA   53 (410)
Q Consensus         3 ~ftC~~C~~~F~~~~~qr~H~ksdwHrYNlKRrva~Lppvs~~~F~~k~~~   53 (410)
                      .|+|++|++.|.+...||.||||||||||||||++||||||+++|..++..
T Consensus       314 ~~tC~~C~v~F~~~~~qR~H~KSDwHrYNLKRkl~gLppvse~eF~~~i~d  364 (373)
T PTZ00448        314 MLLCRKCNIQLMDHNAFKQHYRSEWHIFNTKRNARKMEPISEEEFLELQQD  364 (373)
T ss_pred             CccccccccccCCHHHHHHHhhhhHHHHHHHHHhcCCCCCCHHHHHHHHhh
Confidence            699999999999999999999999999999999999999999999998764

>KOG2482 consensus Predicted C2H2-type Zn-finger protein [Transcription]

Probab=99.58  E-value=1.5e-15  Score=147.83  Aligned_cols=224  Identities=22%  Similarity=0.337  Sum_probs=153.1

Q ss_pred             CcccccccccC-ChHHHhhhhhhccccchhhhhhcCCC--CCCHHHHHHHHHHHHHhhhcCCCCCcccccCcCCccCChH
Q 015261            4 LTCNSCNREFN-DDAEQKLHYKSDWHRYNLKRKVAGVP--GVTEALFLARQAALAQEKNKNATPMTYSCGLCGKGYRSSK   80 (410)
Q Consensus         4 ftC~~C~~~F~-~~~~qr~H~ksdwHrYNlKRrva~Lp--pvs~~~F~~k~~~l~~~~~~~~~~~~~~C~~C~K~f~s~~   80 (410)
                      ..|.+|+..+. +++....|+-.. |..|+     |+|  -|...+|..++..-         ...+.|..|.|.|+.++
T Consensus       145 lqClFCn~e~lgnRs~~l~Hlf~~-H~lni-----GlpDniVyvnelLehLkek---------L~r~~CLyCekifrdkn  209 (423)
T KOG2482|consen  145 LQCLFCNNEGLGNRSEILEHLFHV-HGLNI-----GLPDNIVYVNELLEHLKEK---------LERLRCLYCEKIFRDKN  209 (423)
T ss_pred             eEEEEecchhcccHHHHHHHHHHH-hhhcc-----CCCcceeeHHHHHHHHHHH---------HhhheeeeeccccCCcH
Confidence            46999998887 888999999887 78898     998  78888888876641         13578999999999999


Q ss_pred             HHHHHHhhhhhhh-hhccCC-CchhhhhhhccCC---CCCCCCCCCCccccCCCCCCCCcccccccCcchhhhhhhcccc
Q 015261           81 ALAQHLNSRSHIM-RASQGT-SNEEKEKVIIKPI---PLRDVNKPPRKREANNEESEDSDDEWEEVGPDEVLVSEATNSL  155 (410)
Q Consensus        81 ~l~~Hl~skkHk~-~~~~~~-~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~e~ee~~~~e~~~~~~~~~~  155 (410)
                      +|+.||++|.|+. ++++.. ++    ..++..+   .++....+.-..+.. ++..+++++|.+|.++.          
T Consensus       210 tLkeHMrkK~HrrinPknreYDk----fyiINY~ev~ks~t~~~~e~dret~-~d~~E~D~~wsDw~ed~----------  274 (423)
T KOG2482|consen  210 TLKEHMRKKRHRRINPKNREYDK----FYIINYLEVGKSWTIVHSEDDRETN-EDINETDDTWSDWNEDD----------  274 (423)
T ss_pred             HHHHHHHhccCcccCCCccccce----EEEEeHhhcCCccchhhhhhhhhhh-ccccccccchhhhhcCC----------
Confidence            9999999999988 344332 11    0111110   000000000000100 11223344565543211          


Q ss_pred             cccCCCCCCCCCCccCCCCCCCCCCCCcccCCCCCCCCChhHHhhhhhhhhcCCCCCc--c---cccChHHHHHHHHhHh
Q 015261          156 TNLNVGSPADDDLEEDDDDGAFEEFDPACCFMCDLPHDAIENCMVHMHKCHGFFIPDV--E---YLKDPKGLLTYLGLKV  230 (410)
Q Consensus       156 ~~~~~~~~~~~~~~~~~~~~~~~~i~p~~ClfC~~~f~~~~~~~~HM~~~Hgf~ip~~--~---~lvd~~gLl~yl~~ki  230 (410)
                                           . +.....|+||.+...++..+.+||...|.|.+-..  +   .++....+++|++.+.
T Consensus       275 ---------------------a-~a~~v~CLfC~~~~en~~~l~eHmk~vHe~Dl~Ki~sd~~Ln~YqrvrviNyiRkq~  332 (423)
T KOG2482|consen  275 ---------------------A-EALSVVCLFCTNFYENPVFLFEHMKIVHEFDLLKIQSDYSLNFYQRVRVINYIRKQK  332 (423)
T ss_pred             ---------------------C-CccceEEEeeccchhhHHHHHHHHHHHHHhhHHhhccccccchhhhhhHHHHHHHHh
Confidence                                 0 01125899999999999999999999999988544  3   2578899999999886


Q ss_pred             cCCccccccCCCCcccCCHHHHHHHHHhcCCcccCCCCCCchHHHhhhhhcCccCcCcC
Q 015261          231 KRDFMCLYCNDRCHPFNSLEAVRKHMEAKRHCKIHFGDGDDEEEAELEEFYDYSSSYMD  289 (410)
Q Consensus       231 ~~~~~Cl~C~~~gk~F~s~~alr~HM~~k~HCki~ye~~~~ee~~E~~dFYDFs~sy~d  289 (410)
                      . .-.|-.|.   -.|.+..+++.||....|--|-.+    +.-+.-.+|| | +.|.+
T Consensus       333 ~-~~~c~~cd---~~F~~e~~l~~hm~e~k~l~i~pd----~~iwD~~e~~-f-P~~eN  381 (423)
T KOG2482|consen  333 K-KSRCAECD---LSFWKEPGLLIHMVEDKHLSILPD----EVIWDPREFF-F-PYIEN  381 (423)
T ss_pred             h-cccccccc---ccccCcchhhhhccccccccccCc----ccccCchhhc-c-ceecC
Confidence            5 46899999   899999999999999877766542    3345555666 5 44543

>KOG2462 consensus C2H2-type Zn-finger protein [Transcription]

Probab=99.26  E-value=6.2e-12  Score=120.44  Aligned_cols=54  Identities=28%  Similarity=0.659  Sum_probs=45.0

Q ss_pred             CCcccccccccCChHHHhhhhhhccccchhhhhhcCCCCCCHHHHHHHHHHHHHhhhcCCCCCcccccCcCCccCChHHH
Q 015261            3 GLTCNSCNREFNDDAEQKLHYKSDWHRYNLKRKVAGVPGVTEALFLARQAALAQEKNKNATPMTYSCGLCGKGYRSSKAL   82 (410)
Q Consensus         3 ~ftC~~C~~~F~~~~~qr~H~ksdwHrYNlKRrva~Lppvs~~~F~~k~~~l~~~~~~~~~~~~~~C~~C~K~f~s~~~l   82 (410)
                      .|.|..|+..+.+...|-.|..+  ||           |+.                   ..+.+.|++|+|.|.+-.+|
T Consensus       130 r~~c~eCgk~ysT~snLsrHkQ~--H~-----------~~~-------------------s~ka~~C~~C~K~YvSmpAL  177 (279)
T KOG2462|consen  130 RYKCPECGKSYSTSSNLSRHKQT--HR-----------SLD-------------------SKKAFSCKYCGKVYVSMPAL  177 (279)
T ss_pred             ceeccccccccccccccchhhcc--cc-----------ccc-------------------ccccccCCCCCceeeehHHH
Confidence            58999999999999999999998  64           110                   13567899999999999999


Q ss_pred             HHHHhh
Q 015261           83 AQHLNS   88 (410)
Q Consensus        83 ~~Hl~s   88 (410)
                      +-|++.
T Consensus       178 kMHirT  183 (279)
T KOG2462|consen  178 KMHIRT  183 (279)
T ss_pred             hhHhhc
Confidence            999975

>KOG2482 consensus Predicted C2H2-type Zn-finger protein [Transcription]

Probab=99.15  E-value=2.5e-11  Score=118.71  Aligned_cols=94  Identities=26%  Similarity=0.475  Sum_probs=85.5

Q ss_pred             CCCcccCCCCCCC-CChhHHhhhhhhhhcCCCCCcccccChHHHHHHHHhHhcCCccccccCCCCcccCCHHHHHHHHHh
Q 015261          180 FDPACCFMCDLPH-DAIENCMVHMHKCHGFFIPDVEYLKDPKGLLTYLGLKVKRDFMCLYCNDRCHPFNSLEAVRKHMEA  258 (410)
Q Consensus       180 i~p~~ClfC~~~f-~~~~~~~~HM~~~Hgf~ip~~~~lvd~~gLl~yl~~ki~~~~~Cl~C~~~gk~F~s~~alr~HM~~  258 (410)
                      +-..+|+||+..+ ...+..+.||+..||+.|.-++.+|....||.+|.+++. .++|+||.   |.|.....|+.||+.
T Consensus       142 ~fslqClFCn~e~lgnRs~~l~Hlf~~H~lniGlpDniVyvnelLehLkekL~-r~~CLyCe---kifrdkntLkeHMrk  217 (423)
T KOG2482|consen  142 IFSLQCLFCNNEGLGNRSEILEHLFHVHGLNIGLPDNIVYVNELLEHLKEKLE-RLRCLYCE---KIFRDKNTLKEHMRK  217 (423)
T ss_pred             eeeeEEEEecchhcccHHHHHHHHHHHhhhccCCCcceeeHHHHHHHHHHHHh-hheeeeec---cccCCcHHHHHHHHh
Confidence            4456899999987 588999999999999999999999999999999999987 58999999   999999999999999


Q ss_pred             cCCcccCCCCCCchHHHhhhhhcCc
Q 015261          259 KRHCKIHFGDGDDEEEAELEEFYDY  283 (410)
Q Consensus       259 k~HCki~ye~~~~ee~~E~~dFYDF  283 (410)
                      |+|-+|.-..      .||..||-.
T Consensus       218 K~HrrinPkn------reYDkfyiI  236 (423)
T KOG2482|consen  218 KRHRRINPKN------REYDKFYII  236 (423)
T ss_pred             ccCcccCCCc------cccceEEEE
Confidence            9999997653      699999954

>KOG2462 consensus C2H2-type Zn-finger protein [Transcription]

Probab=99.10  E-value=5.7e-11  Score=113.90  Aligned_cols=106  Identities=23%  Similarity=0.531  Sum_probs=91.7

Q ss_pred             CCcccccccccCChHHHhhhhhhccccchhhhhhcCCCCCCHHHHHHHHHHHHHhhhcCCCCCcccccCcCCccCChHHH
Q 015261            3 GLTCNSCNREFNDDAEQKLHYKSDWHRYNLKRKVAGVPGVTEALFLARQAALAQEKNKNATPMTYSCGLCGKGYRSSKAL   82 (410)
Q Consensus         3 ~ftC~~C~~~F~~~~~qr~H~ksdwHrYNlKRrva~Lppvs~~~F~~k~~~l~~~~~~~~~~~~~~C~~C~K~f~s~~~l   82 (410)
                      .|.|.+|+++|.+..+|+.|.+|  |         .|                          +.+|.+|||.|...=-|
T Consensus       161 a~~C~~C~K~YvSmpALkMHirT--H---------~l--------------------------~c~C~iCGKaFSRPWLL  203 (279)
T KOG2462|consen  161 AFSCKYCGKVYVSMPALKMHIRT--H---------TL--------------------------PCECGICGKAFSRPWLL  203 (279)
T ss_pred             cccCCCCCceeeehHHHhhHhhc--c---------CC--------------------------CcccccccccccchHHh
Confidence            58899999999999999999999  6         22                          46799999999999889


Q ss_pred             HHHHhhhhhhhhhccCCCchhhhhhhccCCCCCCCCCCCCccccCCCCCCCCcccccccCcchhhhhhhcccccccCCCC
Q 015261           83 AQHLNSRSHIMRASQGTSNEEKEKVIIKPIPLRDVNKPPRKREANNEESEDSDDEWEEVGPDEVLVSEATNSLTNLNVGS  162 (410)
Q Consensus        83 ~~Hl~skkHk~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~ee~~~~e~~~~~~~~~~~~~~~~~  162 (410)
                      +.|+|+..                                            +                           
T Consensus       204 QGHiRTHT--------------------------------------------G---------------------------  212 (279)
T KOG2462|consen  204 QGHIRTHT--------------------------------------------G---------------------------  212 (279)
T ss_pred             hccccccc--------------------------------------------C---------------------------
Confidence            98887511                                            0                           


Q ss_pred             CCCCCCccCCCCCCCCCCCCcccCCCCCCCCChhHHhhhhhhhhcCCCCCcccccChHHHHHHHHhHhcCCccccccCCC
Q 015261          163 PADDDLEEDDDDGAFEEFDPACCFMCDLPHDAIENCMVHMHKCHGFFIPDVEYLKDPKGLLTYLGLKVKRDFMCLYCNDR  242 (410)
Q Consensus       163 ~~~~~~~~~~~~~~~~~i~p~~ClfC~~~f~~~~~~~~HM~~~Hgf~ip~~~~lvd~~gLl~yl~~ki~~~~~Cl~C~~~  242 (410)
                                       ..|+.|..|++.|.+.++|..||.+|-+                       .+.|+|.-|+  
T Consensus       213 -----------------EKPF~C~hC~kAFADRSNLRAHmQTHS~-----------------------~K~~qC~~C~--  250 (279)
T KOG2462|consen  213 -----------------EKPFSCPHCGKAFADRSNLRAHMQTHSD-----------------------VKKHQCPRCG--  250 (279)
T ss_pred             -----------------CCCccCCcccchhcchHHHHHHHHhhcC-----------------------CccccCcchh--
Confidence                             1689999999999999999999999655                       3479999999  


Q ss_pred             CcccCCHHHHHHHHHhc
Q 015261          243 CHPFNSLEAVRKHMEAK  259 (410)
Q Consensus       243 gk~F~s~~alr~HM~~k  259 (410)
                       |+|.-..-|.+|..+.
T Consensus       251 -KsFsl~SyLnKH~ES~  266 (279)
T KOG2462|consen  251 -KSFALKSYLNKHSESA  266 (279)
T ss_pred             -hHHHHHHHHHHhhhhc
Confidence             9999999999998764

>KOG2505 consensus Ankyrin repeat protein [General function prediction only]

Probab=99.02  E-value=1.1e-10  Score=119.30  Aligned_cols=50  Identities=42%  Similarity=0.762  Sum_probs=47.0

Q ss_pred             CCcccccccccCChHHHhhhhhhccccchhhhhhcCCCCCCHHHHHHHHH
Q 015261            3 GLTCNSCNREFNDDAEQKLHYKSDWHRYNLKRKVAGVPGVTEALFLARQA   52 (410)
Q Consensus         3 ~ftC~~C~~~F~~~~~qr~H~ksdwHrYNlKRrva~Lppvs~~~F~~k~~   52 (410)
                      ..+|++|++.|.+...||.||++||||+|+||+++++|++++++|.....
T Consensus        66 ~~~CstCq~~F~s~~eqr~HyksD~HR~N~Krkl~~~~ils~edFe~i~s  115 (591)
T KOG2505|consen   66 SDQCSTCQIPFGSRQEQREHYKSDWHRFNTKRKLRGKPILSEEDFEGIIS  115 (591)
T ss_pred             cccccccCCccccHHHHHHHHHHHHHHHHHHHHhcCCCcccHHHHHHhhh
Confidence            46899999999999999999999999999999999999999999987654

>KOG1074 consensus Transcriptional repressor SALM [Transcription]

Probab=98.76  E-value=2.6e-09  Score=114.70  Aligned_cols=54  Identities=24%  Similarity=0.533  Sum_probs=46.5

Q ss_pred             CCCcccCCCCCCCCChhHHhhhhhhhhcCCCCCcccccChHHHHHHHHhHhcCCccccccCCCCcccCCHHHHHHHHHhc
Q 015261          180 FDPACCFMCDLPHDAIENCMVHMHKCHGFFIPDVEYLKDPKGLLTYLGLKVKRDFMCLYCNDRCHPFNSLEAVRKHMEAK  259 (410)
Q Consensus       180 i~p~~ClfC~~~f~~~~~~~~HM~~~Hgf~ip~~~~lvd~~gLl~yl~~ki~~~~~Cl~C~~~gk~F~s~~alr~HM~~k  259 (410)
                      -+|.+|+||-+..+-.+.|..|-++|.|                       ..+|+|-.|+   |.|.+...|+.||-.+
T Consensus       603 TdPNqCiiC~rVlSC~saLqmHyrtHtG-----------------------ERPFkCKiCg---RAFtTkGNLkaH~~vH  656 (958)
T KOG1074|consen  603 TDPNQCIICLRVLSCPSALQMHYRTHTG-----------------------ERPFKCKICG---RAFTTKGNLKAHMSVH  656 (958)
T ss_pred             CCccceeeeeecccchhhhhhhhhcccC-----------------------cCcccccccc---chhccccchhhccccc
Confidence            4789999999999999999999999777                       3488999998   8999999999998653

>KOG1074 consensus Transcriptional repressor SALM [Transcription]

Probab=98.75  E-value=1.2e-08  Score=109.81  Aligned_cols=50  Identities=22%  Similarity=0.600  Sum_probs=45.8

Q ss_pred             cccCCCCCCCCChhHHhhhhhhhhcCCCCCcccccChHHHHHHHHhHhcCCccccccCCCCcccCCHHHHHHHHHh
Q 015261          183 ACCFMCDLPHDAIENCMVHMHKCHGFFIPDVEYLKDPKGLLTYLGLKVKRDFMCLYCNDRCHPFNSLEAVRKHMEA  258 (410)
Q Consensus       183 ~~ClfC~~~f~~~~~~~~HM~~~Hgf~ip~~~~lvd~~gLl~yl~~ki~~~~~Cl~C~~~gk~F~s~~alr~HM~~  258 (410)
                      ..|-.|++.|++..+|-.||++|.|                       .+++.|..|+   +.|.....|+.||.+
T Consensus       880 h~C~vCgk~FsSSsALqiH~rTHtg-----------------------~KPF~C~fC~---~aFttrgnLKvHMgt  929 (958)
T KOG1074|consen  880 HVCNVCGKQFSSSAALEIHMRTHTG-----------------------PKPFFCHFCE---EAFTTRGNLKVHMGT  929 (958)
T ss_pred             hhhccchhcccchHHHHHhhhcCCC-----------------------CCCccchhhh---hhhhhhhhhhhhhcc
Confidence            5699999999999999999999766                       3489999999   999999999999993

>KOG3608 consensus Zn finger proteins [General function prediction only]

Probab=98.45  E-value=2.4e-07  Score=91.68  Aligned_cols=172  Identities=17%  Similarity=0.263  Sum_probs=110.4

Q ss_pred             CcccccccccCChHHHhhhhhhccccchhhhhhcCCCCCCHHHHHHHHH---HHHHhhhcCCCCCcccccCcCCccCChH
Q 015261            4 LTCNSCNREFNDDAEQKLHYKSDWHRYNLKRKVAGVPGVTEALFLARQA---ALAQEKNKNATPMTYSCGLCGKGYRSSK   80 (410)
Q Consensus         4 ftC~~C~~~F~~~~~qr~H~ksdwHrYNlKRrva~Lppvs~~~F~~k~~---~l~~~~~~~~~~~~~~C~~C~K~f~s~~   80 (410)
                      ..|.+|+.-|.+...+-.|.+-.        -...--|.-+.....+++   .|.-+...+  -..|+|+.|..+..+..
T Consensus       208 vACp~Cg~~F~~~tkl~DH~rRq--------t~l~~n~fqC~~C~KrFaTeklL~~Hv~rH--vn~ykCplCdmtc~~~s  277 (467)
T KOG3608|consen  208 VACPHCGELFRTKTKLFDHLRRQ--------TELNTNSFQCAQCFKRFATEKLLKSHVVRH--VNCYKCPLCDMTCSSAS  277 (467)
T ss_pred             EecchHHHHhccccHHHHHHHhh--------hhhcCCchHHHHHHHHHhHHHHHHHHHHHh--hhcccccccccCCCChH
Confidence            46888888888888888887642        111222555554443332   122222222  24689999999999999


Q ss_pred             HHHHHHhhhhhhhhhccCCCchhhhhhhccCCCCCCCCCCCCccccCCCCCCCCcccccccCcchhhhhhhcccccccCC
Q 015261           81 ALAQHLNSRSHIMRASQGTSNEEKEKVIIKPIPLRDVNKPPRKREANNEESEDSDDEWEEVGPDEVLVSEATNSLTNLNV  160 (410)
Q Consensus        81 ~l~~Hl~skkHk~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~ee~~~~e~~~~~~~~~~~~~~~  160 (410)
                      .|.+||+-+.-+.++-+-.   ..+.                                .=+..+++.-            
T Consensus       278 sL~~H~r~rHs~dkpfKCd---~Cd~--------------------------------~c~~esdL~k------------  310 (467)
T KOG3608|consen  278 SLTTHIRYRHSKDKPFKCD---ECDT--------------------------------RCVRESDLAK------------  310 (467)
T ss_pred             HHHHHHHhhhccCCCcccc---chhh--------------------------------hhccHHHHHH------------
Confidence            9999999866543211100   0000                                0000011110            


Q ss_pred             CCCCCCCCccCCCCCCCCCCCCcccCC--CCCCCCChhHHhhhhhhhhcCCCCCcccccChHHHHHHHHhHhcCCccccc
Q 015261          161 GSPADDDLEEDDDDGAFEEFDPACCFM--CDLPHDAIENCMVHMHKCHGFFIPDVEYLKDPKGLLTYLGLKVKRDFMCLY  238 (410)
Q Consensus       161 ~~~~~~~~~~~~~~~~~~~i~p~~Clf--C~~~f~~~~~~~~HM~~~Hgf~ip~~~~lvd~~gLl~yl~~ki~~~~~Cl~  238 (410)
                        +.           .--.-+.++|.+  |..++.+...+..||..+|-.+-|                    .+|.|-.
T Consensus       311 --H~-----------~~HS~~~y~C~h~~C~~s~r~~~q~~~H~~evhEg~np--------------------~~Y~CH~  357 (467)
T KOG3608|consen  311 --HV-----------QVHSKTVYQCEHPDCHYSVRTYTQMRRHFLEVHEGNNP--------------------ILYACHC  357 (467)
T ss_pred             --HH-----------HhccccceecCCCCCcHHHHHHHHHHHHHHHhccCCCC--------------------Cceeeec
Confidence              00           000115689999  999999999999999999933222                    2689999


Q ss_pred             cCCCCcccCCHHHHHHHHHhcCCcccCCCC
Q 015261          239 CNDRCHPFNSLEAVRKHMEAKRHCKIHFGD  268 (410)
Q Consensus       239 C~~~gk~F~s~~alr~HM~~k~HCki~ye~  268 (410)
                      |+   |.|.+-.+|-.|.+.|.--+|||+-
T Consensus       358 Cd---r~ft~G~~L~~HL~kkH~f~~PsGh  384 (467)
T KOG3608|consen  358 CD---RFFTSGKSLSAHLMKKHGFRLPSGH  384 (467)
T ss_pred             ch---hhhccchhHHHHHHHhhcccCCCCC
Confidence            99   9999999999999999999999974

>KOG3576 consensus Ovo and related transcription factors [Transcription]

Probab=98.38  E-value=1.9e-07  Score=86.33  Aligned_cols=23  Identities=26%  Similarity=0.573  Sum_probs=19.6

Q ss_pred             CCcccccccccCChHHHhhhhhh
Q 015261            3 GLTCNSCNREFNDDAEQKLHYKS   25 (410)
Q Consensus         3 ~ftC~~C~~~F~~~~~qr~H~ks   25 (410)
                      .|+|..|++.|.-.-.|-.|||.
T Consensus       117 ~ftCrvCgK~F~lQRmlnrh~kc  139 (267)
T KOG3576|consen  117 SFTCRVCGKKFGLQRMLNRHLKC  139 (267)
T ss_pred             eeeeehhhhhhhHHHHHHHHhhh
Confidence            48888888888888888888887

>PF12756 zf-C2H2_2: C2H2 type zinc-finger (2 copies); PDB: 2DMI_A

Probab=98.24  E-value=4.9e-07  Score=73.85  Aligned_cols=77  Identities=22%  Similarity=0.453  Sum_probs=25.9

Q ss_pred             cccccccccCChHHHhhhhhhccccchhhhhhcCCCCCCHHHHHHHHHHHHHhhhcCCCCCcccccCcCCccCChHHHHH
Q 015261            5 TCNSCNREFNDDAEQKLHYKSDWHRYNLKRKVAGVPGVTEALFLARQAALAQEKNKNATPMTYSCGLCGKGYRSSKALAQ   84 (410)
Q Consensus         5 tC~~C~~~F~~~~~qr~H~ksdwHrYNlKRrva~Lppvs~~~F~~k~~~l~~~~~~~~~~~~~~C~~C~K~f~s~~~l~~   84 (410)
                      .|..|+..|.+...++.||+.. |.+++.. ...|.  ....+...+.        ......+.|.+|++.|.+..+|..
T Consensus         1 ~C~~C~~~f~~~~~l~~H~~~~-H~~~~~~-~~~l~--~~~~~~~~~~--------~~~~~~~~C~~C~~~f~s~~~l~~   68 (100)
T PF12756_consen    1 QCLFCDESFSSVDDLLQHMKKK-HGFDIPD-QKYLV--DPNRLLNYLR--------KKVKESFRCPYCNKTFRSREALQE   68 (100)
T ss_dssp             ------------------------------------------------------------SSEEBSSSS-EESSHHHHHH
T ss_pred             Cccccccccccccccccccccc-ccccccc-ccccc--cccccccccc--------cccCCCCCCCccCCCCcCHHHHHH
Confidence            4999999999999999999886 7766531 11110  0001111000        011225899999999999999999


Q ss_pred             HHhhhhhhh
Q 015261           85 HLNSRSHIM   93 (410)
Q Consensus        85 Hl~skkHk~   93 (410)
                      ||+++.|..
T Consensus        69 Hm~~~~H~~   77 (100)
T PF12756_consen   69 HMRSKHHKK   77 (100)
T ss_dssp             HHHHTTTTC
T ss_pred             HHcCccCCC
Confidence            999999987

>KOG3608 consensus Zn finger proteins [General function prediction only]

Probab=98.17  E-value=2.5e-06  Score=84.53  Aligned_cols=156  Identities=19%  Similarity=0.354  Sum_probs=106.6

Q ss_pred             CCccc--ccccccCChHHHhhhhhhccccchhhhhhcCCCCCCHHHHHHHHH---HHHHhhhcCCCCCcccccCcCCccC
Q 015261            3 GLTCN--SCNREFNDDAEQKLHYKSDWHRYNLKRKVAGVPGVTEALFLARQA---ALAQEKNKNATPMTYSCGLCGKGYR   77 (410)
Q Consensus         3 ~ftC~--~C~~~F~~~~~qr~H~ksdwHrYNlKRrva~Lppvs~~~F~~k~~---~l~~~~~~~~~~~~~~C~~C~K~f~   77 (410)
                      .+.|+  .|-..|.+...||.|.++  |.   -.||.. .|...+.|..+-.   -+.++...  ....|.|..|.|.|.
T Consensus       177 v~~C~W~~Ct~~~~~k~~LreH~r~--Hs---~eKvvA-Cp~Cg~~F~~~tkl~DH~rRqt~l--~~n~fqC~~C~KrFa  248 (467)
T KOG3608|consen  177 VTMCNWAMCTKHMGNKYRLREHIRT--HS---NEKVVA-CPHCGELFRTKTKLFDHLRRQTEL--NTNSFQCAQCFKRFA  248 (467)
T ss_pred             eeeccchhhhhhhccHHHHHHHHHh--cC---CCeEEe-cchHHHHhccccHHHHHHHhhhhh--cCCchHHHHHHHHHh
Confidence            46674  599999999999999999  51   223333 4666666765422   12221111  234788899988899


Q ss_pred             ChHHHHHHHhhhhhhhhhccCCCchhhhhhhccCCCCCCCCCCCCccccCCCCCCCCcccccccCcchhhhhhhcccccc
Q 015261           78 SSKALAQHLNSRSHIMRASQGTSNEEKEKVIIKPIPLRDVNKPPRKREANNEESEDSDDEWEEVGPDEVLVSEATNSLTN  157 (410)
Q Consensus        78 s~~~l~~Hl~skkHk~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~ee~~~~e~~~~~~~~~~~~  157 (410)
                      +++.|..|+..  |                                                                  
T Consensus       249 TeklL~~Hv~r--H------------------------------------------------------------------  260 (467)
T KOG3608|consen  249 TEKLLKSHVVR--H------------------------------------------------------------------  260 (467)
T ss_pred             HHHHHHHHHHH--h------------------------------------------------------------------
Confidence            88888888752  1                                                                  


Q ss_pred             cCCCCCCCCCCccCCCCCCCCCCCCcccCCCCCCCCChhHHhhhhhhhhcCCCCCc----c-cccChHHHHHHHHhHhcC
Q 015261          158 LNVGSPADDDLEEDDDDGAFEEFDPACCFMCDLPHDAIENCMVHMHKCHGFFIPDV----E-YLKDPKGLLTYLGLKVKR  232 (410)
Q Consensus       158 ~~~~~~~~~~~~~~~~~~~~~~i~p~~ClfC~~~f~~~~~~~~HM~~~Hgf~ip~~----~-~lvd~~gLl~yl~~ki~~  232 (410)
                                            +.-++|..|+...+..++|..||+..|+-..|..    + .|+....|-+|+.-+-..
T Consensus       261 ----------------------vn~ykCplCdmtc~~~ssL~~H~r~rHs~dkpfKCd~Cd~~c~~esdL~kH~~~HS~~  318 (467)
T KOG3608|consen  261 ----------------------VNCYKCPLCDMTCSSASSLTTHIRYRHSKDKPFKCDECDTRCVRESDLAKHVQVHSKT  318 (467)
T ss_pred             ----------------------hhcccccccccCCCChHHHHHHHHhhhccCCCccccchhhhhccHHHHHHHHHhcccc
Confidence                                  1234677777777777777777777777655544    2 346666666666544445


Q ss_pred             Cccccc--cCCCCcccCCHHHHHHHHHhc
Q 015261          233 DFMCLY--CNDRCHPFNSLEAVRKHMEAK  259 (410)
Q Consensus       233 ~~~Cl~--C~~~gk~F~s~~alr~HM~~k  259 (410)
                      -|.|..  |.   .+|.+.-.++.||+..
T Consensus       319 ~y~C~h~~C~---~s~r~~~q~~~H~~ev  344 (467)
T KOG3608|consen  319 VYQCEHPDCH---YSVRTYTQMRRHFLEV  344 (467)
T ss_pred             ceecCCCCCc---HHHHHHHHHHHHHHHh
Confidence            689998  99   7789999999999974

>KOG3623 consensus Homeobox transcription factor SIP1 [Transcription]

Probab=98.15  E-value=6e-07  Score=95.56  Aligned_cols=124  Identities=23%  Similarity=0.387  Sum_probs=93.9

Q ss_pred             CCcccccccccCChHHHhhhhhhccccchhhhhhcCCCCCCHHHHHHHHHHHHHhhhcCCCCCcccccCcCCccCChHHH
Q 015261            3 GLTCNSCNREFNDDAEQKLHYKSDWHRYNLKRKVAGVPGVTEALFLARQAALAQEKNKNATPMTYSCGLCGKGYRSSKAL   82 (410)
Q Consensus         3 ~ftC~~C~~~F~~~~~qr~H~ksdwHrYNlKRrva~Lppvs~~~F~~k~~~l~~~~~~~~~~~~~~C~~C~K~f~s~~~l   82 (410)
                      ..||..|...+..-..|++|.|-- |                            +    ..+..|.|..|.-+|..+..|
T Consensus       210 lltcpycdrgykrltslkeHikyr-h----------------------------e----kne~nfsC~lCsytFAyRtQL  256 (1007)
T KOG3623|consen  210 LLTCPYCDRGYKRLTSLKEHIKYR-H----------------------------E----KNEPNFSCMLCSYTFAYRTQL  256 (1007)
T ss_pred             hhcchhHHHHHHHHHHHHHHHHHH-H----------------------------h----hCCCCCcchhhhhhhhhHHHH
Confidence            368888888888888888888763 2                            0    123478899999999999999


Q ss_pred             HHHHhhhhhhhhhccCCCchhhhhhhccCCCCCCCCCCCCccccCCCCCCCCcccccccCcchhhhhhhcccccccCCCC
Q 015261           83 AQHLNSRSHIMRASQGTSNEEKEKVIIKPIPLRDVNKPPRKREANNEESEDSDDEWEEVGPDEVLVSEATNSLTNLNVGS  162 (410)
Q Consensus        83 ~~Hl~skkHk~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~ee~~~~e~~~~~~~~~~~~~~~~~  162 (410)
                      ..||.+.+--.      .     .++                               .++.                   
T Consensus       257 Erhm~~hkpg~------d-----qa~-------------------------------sltq-------------------  275 (1007)
T KOG3623|consen  257 ERHMQLHKPGG------D-----QAI-------------------------------SLTQ-------------------  275 (1007)
T ss_pred             HHHHHhhcCCC------c-----ccc-------------------------------cccc-------------------
Confidence            99997633211      0     000                               0000                   


Q ss_pred             CCCCCCccCCCCCCCCCCCCcccCCCCCCCCChhHHhhhhhhhhcCCCCCcccccChHHHHHHHHhHhcCCccccccCCC
Q 015261          163 PADDDLEEDDDDGAFEEFDPACCFMCDLPHDAIENCMVHMHKCHGFFIPDVEYLKDPKGLLTYLGLKVKRDFMCLYCNDR  242 (410)
Q Consensus       163 ~~~~~~~~~~~~~~~~~i~p~~ClfC~~~f~~~~~~~~HM~~~Hgf~ip~~~~lvd~~gLl~yl~~ki~~~~~Cl~C~~~  242 (410)
                                    ..-+.-++|..||+.|.-.-.|.+|.++|-|                    +   ++|.|.-|+  
T Consensus       276 --------------sa~lRKFKCtECgKAFKfKHHLKEHlRIHSG--------------------E---KPfeCpnCk--  316 (1007)
T KOG3623|consen  276 --------------SALLRKFKCTECGKAFKFKHHLKEHLRIHSG--------------------E---KPFECPNCK--  316 (1007)
T ss_pred             --------------hhhhccccccccchhhhhHHHHHhhheeecC--------------------C---CCcCCcccc--
Confidence                          0124678999999999999999999999766                    3   499999999  


Q ss_pred             CcccCCHHHHHHHHHhcC
Q 015261          243 CHPFNSLEAVRKHMEAKR  260 (410)
Q Consensus       243 gk~F~s~~alr~HM~~k~  260 (410)
                       |+|+...+.-.||-.|.
T Consensus       317 -KRFSHSGSySSHmSSKK  333 (1007)
T KOG3623|consen  317 -KRFSHSGSYSSHMSSKK  333 (1007)
T ss_pred             -cccccCCcccccccccc
Confidence             99999999999999874

>KOG3576 consensus Ovo and related transcription factors [Transcription]

Probab=97.96  E-value=2.6e-06  Score=78.87  Aligned_cols=50  Identities=18%  Similarity=0.444  Sum_probs=35.6

Q ss_pred             cccCCCCCCCCChhHHhhhhhhhhcCCCCCcccccChHHHHHHHHhHhcCCccccccCCCCcccCCHHHHHHHHHh
Q 015261          183 ACCFMCDLPHDAIENCMVHMHKCHGFFIPDVEYLKDPKGLLTYLGLKVKRDFMCLYCNDRCHPFNSLEAVRKHMEA  258 (410)
Q Consensus       183 ~~ClfC~~~f~~~~~~~~HM~~~Hgf~ip~~~~lvd~~gLl~yl~~ki~~~~~Cl~C~~~gk~F~s~~alr~HM~~  258 (410)
                      +-|.|||+.|.+.-+|..||++|.|                       ..+|+|..|+   |.|...-+|..|.+.
T Consensus       146 ~lct~cgkgfndtfdlkrh~rthtg-----------------------vrpykc~~c~---kaftqrcsleshl~k  195 (267)
T KOG3576|consen  146 HLCTFCGKGFNDTFDLKRHTRTHTG-----------------------VRPYKCSLCE---KAFTQRCSLESHLKK  195 (267)
T ss_pred             HHHhhccCcccchhhhhhhhccccC-----------------------ccccchhhhh---HHHHhhccHHHHHHH
Confidence            3477777777777777777777666                       3467777777   777777777777664

>KOG3623 consensus Homeobox transcription factor SIP1 [Transcription]

Probab=97.81  E-value=5e-06  Score=88.75  Aligned_cols=52  Identities=21%  Similarity=0.427  Sum_probs=48.1

Q ss_pred             CCcccCCCCCCCCChhHHhhhhhhhhcCCCCCcccccChHHHHHHHHhHhcCCccccccCCCCcccCCHHHHHHHHHh
Q 015261          181 DPACCFMCDLPHDAIENCMVHMHKCHGFFIPDVEYLKDPKGLLTYLGLKVKRDFMCLYCNDRCHPFNSLEAVRKHMEA  258 (410)
Q Consensus       181 ~p~~ClfC~~~f~~~~~~~~HM~~~Hgf~ip~~~~lvd~~gLl~yl~~ki~~~~~Cl~C~~~gk~F~s~~alr~HM~~  258 (410)
                      .|++|.+|.+.|...-.|++||+.|-|                    +   ++|+|..|+   |+|+...+--+||.-
T Consensus       921 RPyqC~iCkKAFKHKHHLtEHkRLHSG--------------------E---KPfQCdKCl---KRFSHSGSYSQHMNH  972 (1007)
T KOG3623|consen  921 RPYQCIICKKAFKHKHHLTEHKRLHSG--------------------E---KPFQCDKCL---KRFSHSGSYSQHMNH  972 (1007)
T ss_pred             CCcccchhhHhhhhhhhhhhhhhhccC--------------------C---Ccchhhhhh---hhcccccchHhhhcc
Confidence            689999999999999999999999776                    3   499999999   999999999999985

>PF12171 zf-C2H2_jaz: Zinc-finger double-stranded RNA-binding; InterPro: IPR022755 This zinc finger is found in archaea and eukaryotes, and is approximately 30 amino acids in length

Probab=97.76  E-value=9.1e-06  Score=51.62  Aligned_cols=26  Identities=35%  Similarity=0.732  Sum_probs=25.0

Q ss_pred             ccccCcCCccCChHHHHHHHhhhhhh
Q 015261           67 YSCGLCGKGYRSSKALAQHLNSRSHI   92 (410)
Q Consensus        67 ~~C~~C~K~f~s~~~l~~Hl~skkHk   92 (410)
                      |.|.+|+|.|.+..++.+|++|++|+
T Consensus         2 ~~C~~C~k~f~~~~~~~~H~~sk~Hk   27 (27)
T PF12171_consen    2 FYCDACDKYFSSENQLKQHMKSKKHK   27 (27)
T ss_dssp             CBBTTTTBBBSSHHHHHCCTTSHHHH
T ss_pred             CCcccCCCCcCCHHHHHHHHccCCCC
Confidence            78999999999999999999999996

The mammalian members of this group occur multiple times along the protein, joined by flexible linkers, and are referred to as JAZ - dsRNA-binding ZF protein - zinc-fingers. The JAZ proteins are expressed in all tissues tested and localise in the nucleus, particularly the nucleolus []. JAZ preferentially binds to double-stranded (ds) RNA or RNA/DNA hybrids rather than DNA. In addition to binding double-stranded RNA, these zinc-fingers are required for nucleolar localisation. This entry represents the multiple-adjacent-C2H2 zinc finger, JAZ. ; PDB: 4DGW_A 1ZR9_A.

>PHA00733 hypothetical protein

Probab=97.69  E-value=8e-05  Score=65.12  Aligned_cols=52  Identities=19%  Similarity=0.455  Sum_probs=45.3

Q ss_pred             CCcccCCCCCCCCChhHHhhhhhhhhcCCCCCcccccChHHHHHHHHhHhcCCccccccCCCCcccCCHHHHHHHHHhcC
Q 015261          181 DPACCFMCDLPHDAIENCMVHMHKCHGFFIPDVEYLKDPKGLLTYLGLKVKRDFMCLYCNDRCHPFNSLEAVRKHMEAKR  260 (410)
Q Consensus       181 ~p~~ClfC~~~f~~~~~~~~HM~~~Hgf~ip~~~~lvd~~gLl~yl~~ki~~~~~Cl~C~~~gk~F~s~~alr~HM~~k~  260 (410)
                      .|+.|..|++.|.+...+..|+..+ .                        .++.|..|+   +.|....+|..||..+.
T Consensus        72 kPy~C~~Cgk~Fss~s~L~~H~r~h-~------------------------~~~~C~~Cg---K~F~~~~sL~~H~~~~h  123 (128)
T PHA00733         72 SPYVCPLCLMPFSSSVSLKQHIRYT-E------------------------HSKVCPVCG---KEFRNTDSTLDHVCKKH  123 (128)
T ss_pred             CCccCCCCCCcCCCHHHHHHHHhcC-C------------------------cCccCCCCC---CccCCHHHHHHHHHHhc
Confidence            4678999999999999999999863 1                        147999999   99999999999999763

>PF12874 zf-met: Zinc-finger of C2H2 type; PDB: 1ZU1_A 2KVG_A

Probab=97.64  E-value=2.6e-05  Score=48.32  Aligned_cols=25  Identities=40%  Similarity=0.929  Sum_probs=23.9

Q ss_pred             ccccCcCCccCChHHHHHHHhhhhh
Q 015261           67 YSCGLCGKGYRSSKALAQHLNSRSH   91 (410)
Q Consensus        67 ~~C~~C~K~f~s~~~l~~Hl~skkH   91 (410)
                      |.|.+|++.|.+..+|..|+++++|
T Consensus         1 ~~C~~C~~~f~s~~~~~~H~~s~~H   25 (25)
T PF12874_consen    1 FYCDICNKSFSSENSLRQHLRSKKH   25 (25)
T ss_dssp             EEETTTTEEESSHHHHHHHHTTHHH
T ss_pred             CCCCCCCCCcCCHHHHHHHHCcCCC
Confidence            5799999999999999999999987

>PHA02768 hypothetical protein; Provisional

Probab=97.60  E-value=2.4e-05  Score=58.15  Aligned_cols=42  Identities=12%  Similarity=0.128  Sum_probs=35.9

Q ss_pred             CcccCCCCCCCCChhHHhhhhhhhhcCCCCCcccccChHHHHHHHHhHhcCCccccccCCCCcccCCHHH
Q 015261          182 PACCFMCDLPHDAIENCMVHMHKCHGFFIPDVEYLKDPKGLLTYLGLKVKRDFMCLYCNDRCHPFNSLEA  251 (410)
Q Consensus       182 p~~ClfC~~~f~~~~~~~~HM~~~Hgf~ip~~~~lvd~~gLl~yl~~ki~~~~~Cl~C~~~gk~F~s~~a  251 (410)
                      -+.|..||+.|+....|..||++|+.                         +++|..|+   |.|.....
T Consensus         5 ~y~C~~CGK~Fs~~~~L~~H~r~H~k-------------------------~~kc~~C~---k~f~~~s~   46 (55)
T PHA02768          5 GYECPICGEIYIKRKSMITHLRKHNT-------------------------NLKLSNCK---RISLRTGE   46 (55)
T ss_pred             ccCcchhCCeeccHHHHHHHHHhcCC-------------------------cccCCccc---ceecccce
Confidence            47899999999999999999999752                         67999999   88875543

>PHA02768 hypothetical protein; Provisional

Probab=97.57  E-value=3.3e-05  Score=57.39  Aligned_cols=42  Identities=12%  Similarity=0.232  Sum_probs=35.8

Q ss_pred             CCcccccccccCChHHHhhhhhhccccchhhhhhcCCCCCCHHHHHHHHHHHHHhhhcCCCCCcccccCcCCccCChHH
Q 015261            3 GLTCNSCNREFNDDAEQKLHYKSDWHRYNLKRKVAGVPGVTEALFLARQAALAQEKNKNATPMTYSCGLCGKGYRSSKA   81 (410)
Q Consensus         3 ~ftC~~C~~~F~~~~~qr~H~ksdwHrYNlKRrva~Lppvs~~~F~~k~~~l~~~~~~~~~~~~~~C~~C~K~f~s~~~   81 (410)
                      .|.|..||..|...+.|..||++.|                                     ++|+|..|+|.|...+.
T Consensus         5 ~y~C~~CGK~Fs~~~~L~~H~r~H~-------------------------------------k~~kc~~C~k~f~~~s~   46 (55)
T PHA02768          5 GYECPICGEIYIKRKSMITHLRKHN-------------------------------------TNLKLSNCKRISLRTGE   46 (55)
T ss_pred             ccCcchhCCeeccHHHHHHHHHhcC-------------------------------------CcccCCcccceecccce
Confidence            5899999999999999999999932                                     25679999999886554

>PHA00732 hypothetical protein

Probab=97.39  E-value=0.00012  Score=58.79  Aligned_cols=47  Identities=17%  Similarity=0.376  Sum_probs=39.6

Q ss_pred             CcccCCCCCCCCChhHHhhhhhhhhcCCCCCcccccChHHHHHHHHhHhcCCccccccCCCCcccCCHHHHHHHHHhc
Q 015261          182 PACCFMCDLPHDAIENCMVHMHKCHGFFIPDVEYLKDPKGLLTYLGLKVKRDFMCLYCNDRCHPFNSLEAVRKHMEAK  259 (410)
Q Consensus       182 p~~ClfC~~~f~~~~~~~~HM~~~Hgf~ip~~~~lvd~~gLl~yl~~ki~~~~~Cl~C~~~gk~F~s~~alr~HM~~k  259 (410)
                      |+.|..|++.|.+...+..||..+|.                         ++.|..|+   +.|.+   +..|+.+|
T Consensus         1 py~C~~Cgk~F~s~s~Lk~H~r~~H~-------------------------~~~C~~Cg---KsF~~---l~~H~~~~   47 (79)
T PHA00732          1 MFKCPICGFTTVTLFALKQHARRNHT-------------------------LTKCPVCN---KSYRR---LNQHFYSQ   47 (79)
T ss_pred             CccCCCCCCccCCHHHHHHHhhcccC-------------------------CCccCCCC---CEeCC---hhhhhccc
Confidence            57899999999999999999986554                         35799999   88884   77898766

>PHA00732 hypothetical protein

Probab=97.26  E-value=0.00018  Score=57.68  Aligned_cols=49  Identities=29%  Similarity=0.485  Sum_probs=39.9

Q ss_pred             CCcccccccccCChHHHhhhhhhccccchhhhhhcCCCCCCHHHHHHHHHHHHHhhhcCCCCCcccccCcCCccCChHHH
Q 015261            3 GLTCNSCNREFNDDAEQKLHYKSDWHRYNLKRKVAGVPGVTEALFLARQAALAQEKNKNATPMTYSCGLCGKGYRSSKAL   82 (410)
Q Consensus         3 ~ftC~~C~~~F~~~~~qr~H~ksdwHrYNlKRrva~Lppvs~~~F~~k~~~l~~~~~~~~~~~~~~C~~C~K~f~s~~~l   82 (410)
                      ||.|..|+..|.+...++.|++.. |.                                    ++.|..|+|.|.+   +
T Consensus         1 py~C~~Cgk~F~s~s~Lk~H~r~~-H~------------------------------------~~~C~~CgKsF~~---l   40 (79)
T PHA00732          1 MFKCPICGFTTVTLFALKQHARRN-HT------------------------------------LTKCPVCNKSYRR---L   40 (79)
T ss_pred             CccCCCCCCccCCHHHHHHHhhcc-cC------------------------------------CCccCCCCCEeCC---h
Confidence            689999999999999999999853 31                                    2359999999984   6


Q ss_pred             HHHHhhhhh
Q 015261           83 AQHLNSRSH   91 (410)
Q Consensus        83 ~~Hl~skkH   91 (410)
                      ..|+++|..
T Consensus        41 ~~H~~~~~~   49 (79)
T PHA00732         41 NQHFYSQYD   49 (79)
T ss_pred             hhhhcccCC
Confidence            788877654

>smart00451 ZnF_U1 U1-like zinc finger

Probab=97.23  E-value=0.00012  Score=48.96  Aligned_cols=34  Identities=32%  Similarity=0.642  Sum_probs=31.2

Q ss_pred             CCCCcccccccccCChHHHhhhhhhccccchhhh
Q 015261            1 MPGLTCNSCNREFNDDAEQKLHYKSDWHRYNLKR   34 (410)
Q Consensus         1 ~~~ftC~~C~~~F~~~~~qr~H~ksdwHrYNlKR   34 (410)
                      +++|.|..|++.|.+...++.|+++-.|+-|+++
T Consensus         1 ~~~~~C~~C~~~~~~~~~~~~H~~gk~H~~~~~~   34 (35)
T smart00451        1 TGGFYCKLCNVTFTDEISVEAHLKGKKHKKNVKK   34 (35)
T ss_pred             CcCeEccccCCccCCHHHHHHHHChHHHHHHHHc
Confidence            4689999999999999999999999999988865

Family of C2H2-type zinc fingers, present in matrin, U1 small nuclear ribonucleoprotein C and other RNA-binding proteins.

>smart00451 ZnF_U1 U1-like zinc finger

Probab=97.18  E-value=0.00025  Score=47.30  Aligned_cols=30  Identities=20%  Similarity=0.542  Sum_probs=27.5

Q ss_pred             cccccCcCCccCChHHHHHHHhhhhhhhhh
Q 015261           66 TYSCGLCGKGYRSSKALAQHLNSRSHIMRA   95 (410)
Q Consensus        66 ~~~C~~C~K~f~s~~~l~~Hl~skkHk~~~   95 (410)
                      .|.|.+|++.|.+..++.+|+++++|+.+.
T Consensus         3 ~~~C~~C~~~~~~~~~~~~H~~gk~H~~~~   32 (35)
T smart00451        3 GFYCKLCNVTFTDEISVEAHLKGKKHKKNV   32 (35)
T ss_pred             CeEccccCCccCCHHHHHHHHChHHHHHHH
Confidence            578999999999999999999999999854

Family of C2H2-type zinc fingers, present in matrin, U1 small nuclear ribonucleoprotein C and other RNA-binding proteins.

>PHA00733 hypothetical protein

Probab=97.13  E-value=0.00053  Score=59.97  Aligned_cols=25  Identities=24%  Similarity=0.686  Sum_probs=21.5

Q ss_pred             cccccCcCCccCChHHHHHHHhhhh
Q 015261           66 TYSCGLCGKGYRSSKALAQHLNSRS   90 (410)
Q Consensus        66 ~~~C~~C~K~f~s~~~l~~Hl~skk   90 (410)
                      +|.|.+|+|.|.....|..|+..+.
T Consensus        99 ~~~C~~CgK~F~~~~sL~~H~~~~h  123 (128)
T PHA00733         99 SKVCPVCGKEFRNTDSTLDHVCKKH  123 (128)
T ss_pred             CccCCCCCCccCCHHHHHHHHHHhc
Confidence            5789999999999999999987654

>KOG3993 consensus Transcription factor (contains Zn finger) [Transcription]

Probab=97.04  E-value=0.0009  Score=68.14  Aligned_cols=87  Identities=26%  Similarity=0.474  Sum_probs=55.3

Q ss_pred             CCcccccccccCChHHHhhhhhhccccchhhhhhcCCCCCCHHHHHHHHHHHHHhhh--c-CCCCCcccccCcCCccCCh
Q 015261            3 GLTCNSCNREFNDDAEQKLHYKSDWHRYNLKRKVAGVPGVTEALFLARQAALAQEKN--K-NATPMTYSCGLCGKGYRSS   79 (410)
Q Consensus         3 ~ftC~~C~~~F~~~~~qr~H~ksdwHrYNlKRrva~Lppvs~~~F~~k~~~l~~~~~--~-~~~~~~~~C~~C~K~f~s~   79 (410)
                      .|.|.-|++.|.-+.+|-.|-|  ||.=------|+-||-... -..+  .+.++..  . +.....|.|.+|+|+|+.+
T Consensus       295 EYrCPEC~KVFsCPANLASHRR--WHKPR~eaa~a~~~P~k~~-~~~r--ae~~ea~rsg~dss~gi~~C~~C~KkFrRq  369 (500)
T KOG3993|consen  295 EYRCPECDKVFSCPANLASHRR--WHKPRPEAAKAGSPPPKQA-VETR--AEVQEAERSGDDSSSGIFSCHTCGKKFRRQ  369 (500)
T ss_pred             eecCCcccccccCchhhhhhhc--ccCCchhhhhcCCCChhhh-hhhh--hhhhhccccCCcccCceeecHHhhhhhHHH
Confidence            4899999999999999999998  8932110111245553221 0111  1111111  1 2233479999999999999


Q ss_pred             HHHHHHHhhhhhhhh
Q 015261           80 KALAQHLNSRSHIMR   94 (410)
Q Consensus        80 ~~l~~Hl~skkHk~~   94 (410)
                      .-|+.|+.+.....+
T Consensus       370 AYLrKHqlthq~~~~  384 (500)
T KOG3993|consen  370 AYLRKHQLTHQRAPL  384 (500)
T ss_pred             HHHHHhHHhhhcccc
Confidence            999999877555443

>PHA00616 hypothetical protein

Probab=97.01  E-value=0.00024  Score=50.47  Aligned_cols=27  Identities=15%  Similarity=0.230  Sum_probs=25.7

Q ss_pred             CcccCCCCCCCCChhHHhhhhhhhhcC
Q 015261          182 PACCFMCDLPHDAIENCMVHMHKCHGF  208 (410)
Q Consensus       182 p~~ClfC~~~f~~~~~~~~HM~~~Hgf  208 (410)
                      |++|+.||..|.....+..||++|||-
T Consensus         1 pYqC~~CG~~F~~~s~l~~H~r~~hg~   27 (44)
T PHA00616          1 MYQCLRCGGIFRKKKEVIEHLLSVHKQ   27 (44)
T ss_pred             CCccchhhHHHhhHHHHHHHHHHhcCC
Confidence            689999999999999999999999995

>PLN03086 PRLI-interacting factor K; Provisional

Probab=97.01  E-value=0.0012  Score=70.58  Aligned_cols=50  Identities=20%  Similarity=0.278  Sum_probs=35.1

Q ss_pred             CCcccCCCCCCCC----------ChhHHhhhhhhhhcCCCCCcccccChHHHHHHHHhHhcCCccccccCCCCcccCCHH
Q 015261          181 DPACCFMCDLPHD----------AIENCMVHMHKCHGFFIPDVEYLKDPKGLLTYLGLKVKRDFMCLYCNDRCHPFNSLE  250 (410)
Q Consensus       181 ~p~~ClfC~~~f~----------~~~~~~~HM~~~Hgf~ip~~~~lvd~~gLl~yl~~ki~~~~~Cl~C~~~gk~F~s~~  250 (410)
                      .|..|.||+..+.          ....+..|+.. +|                       .....|..||   +.|. +.
T Consensus       503 Kpi~C~fC~~~v~~g~~~~d~~d~~s~Lt~HE~~-CG-----------------------~rt~~C~~Cg---k~Vr-lr  554 (567)
T PLN03086        503 RLITCRFCGDMVQAGGSAMDVRDRLRGMSEHESI-CG-----------------------SRTAPCDSCG---RSVM-LK  554 (567)
T ss_pred             CceeCCCCCCccccCccccchhhhhhhHHHHHHh-cC-----------------------CcceEccccC---Ceee-eh
Confidence            5678999999884          23466677766 34                       3468999998   6554 55


Q ss_pred             HHHHHHHh
Q 015261          251 AVRKHMEA  258 (410)
Q Consensus       251 alr~HM~~  258 (410)
                      .+..|+..
T Consensus       555 dm~~H~~~  562 (567)
T PLN03086        555 EMDIHQIA  562 (567)
T ss_pred             hHHHHHHH
Confidence            67788764

>PF12171 zf-C2H2_jaz: Zinc-finger double-stranded RNA-binding; InterPro: IPR022755 This zinc finger is found in archaea and eukaryotes, and is approximately 30 amino acids in length

Probab=96.75  E-value=0.00051  Score=43.48  Aligned_cols=27  Identities=30%  Similarity=0.704  Sum_probs=24.4

Q ss_pred             CCcccccccccCChHHHhhhhhhcccc
Q 015261            3 GLTCNSCNREFNDDAEQKLHYKSDWHR   29 (410)
Q Consensus         3 ~ftC~~C~~~F~~~~~qr~H~ksdwHr   29 (410)
                      .|.|..|++.|.+...++.|++|.+|+
T Consensus         1 q~~C~~C~k~f~~~~~~~~H~~sk~Hk   27 (27)
T PF12171_consen    1 QFYCDACDKYFSSENQLKQHMKSKKHK   27 (27)
T ss_dssp             -CBBTTTTBBBSSHHHHHCCTTSHHHH
T ss_pred             CCCcccCCCCcCCHHHHHHHHccCCCC
Confidence            388999999999999999999998773

The mammalian members of this group occur multiple times along the protein, joined by flexible linkers, and are referred to as JAZ - dsRNA-binding ZF protein - zinc-fingers. The JAZ proteins are expressed in all tissues tested and localise in the nucleus, particularly the nucleolus []. JAZ preferentially binds to double-stranded (ds) RNA or RNA/DNA hybrids rather than DNA. In addition to binding double-stranded RNA, these zinc-fingers are required for nucleolar localisation. This entry represents the multiple-adjacent-C2H2 zinc finger, JAZ. ; PDB: 4DGW_A 1ZR9_A.

>PF13912 zf-C2H2_6: C2H2-type zinc finger; PDB: 1JN7_A 1FU9_A 2L1O_A 1NJQ_A 2EN8_A 2EMM_A 1FV5_A 1Y0J_B 2L6Z_B

Probab=96.55  E-value=0.00075  Score=42.45  Aligned_cols=26  Identities=15%  Similarity=0.247  Sum_probs=24.1

Q ss_pred             CcccCCCCCCCCChhHHhhhhhhhhc
Q 015261          182 PACCFMCDLPHDAIENCMVHMHKCHG  207 (410)
Q Consensus       182 p~~ClfC~~~f~~~~~~~~HM~~~Hg  207 (410)
                      |+.|..|+..|.+...+..||+.||+
T Consensus         1 ~~~C~~C~~~F~~~~~l~~H~~~h~~   26 (27)
T PF13912_consen    1 PFECDECGKTFSSLSALREHKRSHCS   26 (27)
T ss_dssp             SEEETTTTEEESSHHHHHHHHCTTTT
T ss_pred             CCCCCccCCccCChhHHHHHhHHhcC
Confidence            57899999999999999999998875

>PF00096 zf-C2H2: Zinc finger, C2H2 type; InterPro: IPR007087 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule

Probab=96.55  E-value=0.0014  Score=39.61  Aligned_cols=22  Identities=36%  Similarity=0.958  Sum_probs=20.7

Q ss_pred             ccccCcCCccCChHHHHHHHhh
Q 015261           67 YSCGLCGKGYRSSKALAQHLNS   88 (410)
Q Consensus        67 ~~C~~C~K~f~s~~~l~~Hl~s   88 (410)
                      |.|+.|++.|.+...|..|++.
T Consensus         1 y~C~~C~~~f~~~~~l~~H~~~   22 (23)
T PF00096_consen    1 YKCPICGKSFSSKSNLKRHMRR   22 (23)
T ss_dssp             EEETTTTEEESSHHHHHHHHHH
T ss_pred             CCCCCCCCccCCHHHHHHHHhH
Confidence            6799999999999999999986

Some of these domains bind zinc, but many do not; instead binding other metals such as iron, or no metal at all. For example, some family members form salt bridges to stabilise the finger-like folds. They were first identified as a DNA-binding motif in transcription factor TFIIIA from Xenopus laevis (African clawed frog), however they are now recognised to bind DNA, RNA, protein and/or lipid substrates [, , , , ]. Their binding properties depend on the amino acid sequence of the finger domains and of the linker between fingers, as well as on the higher-order structures and the number of fingers. Znf domains are often found in clusters, where fingers can have different binding specificities. There are many superfamilies of Znf motifs, varying in both sequence and structure. They display considerable versatility in binding modes, even between members of the same class (e.g. some bind DNA, others protein), suggesting that Znf motifs are stable scaffolds that have evolved specialised functions. For example, Znf-containing proteins function in gene transcription, translation, mRNA trafficking, cytoskeleton organisation, epithelial development, cell adhesion, protein folding, chromatin remodelling and zinc sensing, to name but a few []. Zinc-binding motifs are stable structures, and they rarely undergo conformational changes upon binding their target. The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger: #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C], where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter []. This entry represents the classical C2H2 zinc finger domain. More information about these proteins can be found at Protein of the Month: Zinc Fingers [].; GO: 0008270 zinc ion binding, 0005622 intracellular; PDB: 2D9H_A 2EPC_A 1SP1_A 1VA3_A 2WBT_B 2ELR_A 2YTP_A 2YTT_A 1VA1_A 2ELO_A ....

>PF13894 zf-C2H2_4: C2H2-type zinc finger; PDB: 2ELX_A 2EPP_A 2DLK_A 1X6H_A 2EOU_A 2EMB_A 2GQJ_A 2CSH_A 2WBT_B 2ELM_A

Probab=96.38  E-value=0.0014  Score=39.36  Aligned_cols=24  Identities=21%  Similarity=0.364  Sum_probs=20.5

Q ss_pred             cccCCCCCCCCChhHHhhhhhhhh
Q 015261          183 ACCFMCDLPHDAIENCMVHMHKCH  206 (410)
Q Consensus       183 ~~ClfC~~~f~~~~~~~~HM~~~H  206 (410)
                      +.|.+|+..|.+...+..||.++|
T Consensus         1 ~~C~~C~~~~~~~~~l~~H~~~~H   24 (24)
T PF13894_consen    1 FQCPICGKSFRSKSELRQHMRTHH   24 (24)
T ss_dssp             EE-SSTS-EESSHHHHHHHHHHHS
T ss_pred             CCCcCCCCcCCcHHHHHHHHHhhC
Confidence            479999999999999999999987

...

>PF13912 zf-C2H2_6: C2H2-type zinc finger; PDB: 1JN7_A 1FU9_A 2L1O_A 1NJQ_A 2EN8_A 2EMM_A 1FV5_A 1Y0J_B 2L6Z_B

Probab=96.32  E-value=0.0019  Score=40.61  Aligned_cols=24  Identities=21%  Similarity=0.580  Sum_probs=22.6

Q ss_pred             CCcccccccccCChHHHhhhhhhc
Q 015261            3 GLTCNSCNREFNDDAEQKLHYKSD   26 (410)
Q Consensus         3 ~ftC~~C~~~F~~~~~qr~H~ksd   26 (410)
                      +|+|..|+..|.+...++.|+++.
T Consensus         1 ~~~C~~C~~~F~~~~~l~~H~~~h   24 (27)
T PF13912_consen    1 PFECDECGKTFSSLSALREHKRSH   24 (27)
T ss_dssp             SEEETTTTEEESSHHHHHHHHCTT
T ss_pred             CCCCCccCCccCChhHHHHHhHHh
Confidence            689999999999999999999984

>PF05605 zf-Di19: Drought induced 19 protein (Di19), zinc-binding; InterPro: IPR008598 This entry consists of several drought induced 19 (Di19) like and RING finger 114 proteins

Probab=96.16  E-value=0.0067  Score=44.82  Aligned_cols=51  Identities=25%  Similarity=0.546  Sum_probs=39.0

Q ss_pred             CCcccccccccCChHHHhhhhhhccccchhhhhhcCCCCCCHHHHHHHHHHHHHhhhcCCCCCcccccCcCCccCChHHH
Q 015261            3 GLTCNSCNREFNDDAEQKLHYKSDWHRYNLKRKVAGVPGVTEALFLARQAALAQEKNKNATPMTYSCGLCGKGYRSSKAL   82 (410)
Q Consensus         3 ~ftC~~C~~~F~~~~~qr~H~ksdwHrYNlKRrva~Lppvs~~~F~~k~~~l~~~~~~~~~~~~~~C~~C~K~f~s~~~l   82 (410)
                      .|+|.+|+.. -+...|..|.... |+.                                ..+.+.|++|...+.  ..|
T Consensus         2 ~f~CP~C~~~-~~~~~L~~H~~~~-H~~--------------------------------~~~~v~CPiC~~~~~--~~l   45 (54)
T PF05605_consen    2 SFTCPYCGKG-FSESSLVEHCEDE-HRS--------------------------------ESKNVVCPICSSRVT--DNL   45 (54)
T ss_pred             CcCCCCCCCc-cCHHHHHHHHHhH-CcC--------------------------------CCCCccCCCchhhhh--hHH
Confidence            6999999995 4678999999997 531                                123578999998655  378


Q ss_pred             HHHHhhh
Q 015261           83 AQHLNSR   89 (410)
Q Consensus        83 ~~Hl~sk   89 (410)
                      ..||.+.
T Consensus        46 ~~Hl~~~   52 (54)
T PF05605_consen   46 IRHLNSQ   52 (54)
T ss_pred             HHHHHHh
Confidence            8998764

Di19 has been found to be strongly expressed in both the roots and leaves of Arabidopsis thaliana during progressive drought [], whilst RING finger proteins are thought to play a role in spermatogenesis. The precise function is unknown.

>PF12874 zf-met: Zinc-finger of C2H2 type; PDB: 1ZU1_A 2KVG_A

Probab=96.15  E-value=0.0018  Score=39.91  Aligned_cols=25  Identities=28%  Similarity=0.728  Sum_probs=22.5

Q ss_pred             CcccccccccCChHHHhhhhhhccc
Q 015261            4 LTCNSCNREFNDDAEQKLHYKSDWH   28 (410)
Q Consensus         4 ftC~~C~~~F~~~~~qr~H~ksdwH   28 (410)
                      |.|..|++.|.+...++.|+++-.|
T Consensus         1 ~~C~~C~~~f~s~~~~~~H~~s~~H   25 (25)
T PF12874_consen    1 FYCDICNKSFSSENSLRQHLRSKKH   25 (25)
T ss_dssp             EEETTTTEEESSHHHHHHHHTTHHH
T ss_pred             CCCCCCCCCcCCHHHHHHHHCcCCC
Confidence            6899999999999999999998433

>KOG0717 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]

Probab=95.96  E-value=0.0031  Score=65.16  Aligned_cols=29  Identities=34%  Similarity=0.637  Sum_probs=27.3

Q ss_pred             ccccCcCCccCChHHHHHHHhhhhhhhhh
Q 015261           67 YSCGLCGKGYRSSKALAQHLNSRSHIMRA   95 (410)
Q Consensus        67 ~~C~~C~K~f~s~~~l~~Hl~skkHk~~~   95 (410)
                      ++|.+|.|+|++.+++.+|..||+|+.++
T Consensus       293 lyC~vCnKsFKseKq~kNHEnSKKHkenv  321 (508)
T KOG0717|consen  293 LYCVVCNKSFKSEKQLKNHENSKKHKENV  321 (508)
T ss_pred             eEEeeccccccchHHHHhhHHHHHHHHHH
Confidence            77999999999999999999999999864

>KOG3993 consensus Transcription factor (contains Zn finger) [Transcription]

Probab=95.81  E-value=0.0029  Score=64.58  Aligned_cols=27  Identities=11%  Similarity=0.070  Sum_probs=24.7

Q ss_pred             CcccCCCCCCCCChhHHhhhhhhhhcC
Q 015261          182 PACCFMCDLPHDAIENCMVHMHKCHGF  208 (410)
Q Consensus       182 p~~ClfC~~~f~~~~~~~~HM~~~Hgf  208 (410)
                      .+.|-.|++.|....-|.+|..+||-.
T Consensus       356 i~~C~~C~KkFrRqAYLrKHqlthq~~  382 (500)
T KOG3993|consen  356 IFSCHTCGKKFRRQAYLRKHQLTHQRA  382 (500)
T ss_pred             eeecHHhhhhhHHHHHHHHhHHhhhcc
Confidence            689999999999999999999998863

>PF00096 zf-C2H2: Zinc finger, C2H2 type; InterPro: IPR007087 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule

Probab=95.78  E-value=0.0046  Score=37.23  Aligned_cols=22  Identities=27%  Similarity=0.762  Sum_probs=20.6

Q ss_pred             ccccccCCCCcccCCHHHHHHHHHh
Q 015261          234 FMCLYCNDRCHPFNSLEAVRKHMEA  258 (410)
Q Consensus       234 ~~Cl~C~~~gk~F~s~~alr~HM~~  258 (410)
                      |+|..|+   +.|.+...|+.||+.
T Consensus         1 y~C~~C~---~~f~~~~~l~~H~~~   22 (23)
T PF00096_consen    1 YKCPICG---KSFSSKSNLKRHMRR   22 (23)
T ss_dssp             EEETTTT---EEESSHHHHHHHHHH
T ss_pred             CCCCCCC---CccCCHHHHHHHHhH
Confidence            5799999   999999999999986

Some of these domains bind zinc, but many do not; instead binding other metals such as iron, or no metal at all. For example, some family members form salt bridges to stabilise the finger-like folds. They were first identified as a DNA-binding motif in transcription factor TFIIIA from Xenopus laevis (African clawed frog), however they are now recognised to bind DNA, RNA, protein and/or lipid substrates [, , , , ]. Their binding properties depend on the amino acid sequence of the finger domains and of the linker between fingers, as well as on the higher-order structures and the number of fingers. Znf domains are often found in clusters, where fingers can have different binding specificities. There are many superfamilies of Znf motifs, varying in both sequence and structure. They display considerable versatility in binding modes, even between members of the same class (e.g. some bind DNA, others protein), suggesting that Znf motifs are stable scaffolds that have evolved specialised functions. For example, Znf-containing proteins function in gene transcription, translation, mRNA trafficking, cytoskeleton organisation, epithelial development, cell adhesion, protein folding, chromatin remodelling and zinc sensing, to name but a few []. Zinc-binding motifs are stable structures, and they rarely undergo conformational changes upon binding their target. The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger: #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C], where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter []. This entry represents the classical C2H2 zinc finger domain. More information about these proteins can be found at Protein of the Month: Zinc Fingers [].; GO: 0008270 zinc ion binding, 0005622 intracellular; PDB: 2D9H_A 2EPC_A 1SP1_A 1VA3_A 2WBT_B 2ELR_A 2YTP_A 2YTT_A 1VA1_A 2ELO_A ....

>PF13894 zf-C2H2_4: C2H2-type zinc finger; PDB: 2ELX_A 2EPP_A 2DLK_A 1X6H_A 2EOU_A 2EMB_A 2GQJ_A 2CSH_A 2WBT_B 2ELM_A

Probab=95.75  E-value=0.0046  Score=36.96  Aligned_cols=23  Identities=22%  Similarity=0.703  Sum_probs=19.6

Q ss_pred             CcccccccccCChHHHhhhhhhc
Q 015261            4 LTCNSCNREFNDDAEQKLHYKSD   26 (410)
Q Consensus         4 ftC~~C~~~F~~~~~qr~H~ksd   26 (410)
                      |.|..|+..|.+...++.|+++.
T Consensus         1 ~~C~~C~~~~~~~~~l~~H~~~~   23 (24)
T PF13894_consen    1 FQCPICGKSFRSKSELRQHMRTH   23 (24)
T ss_dssp             EE-SSTS-EESSHHHHHHHHHHH
T ss_pred             CCCcCCCCcCCcHHHHHHHHHhh
Confidence            68999999999999999999984

...

>PHA00616 hypothetical protein

Probab=95.66  E-value=0.0027  Score=45.17  Aligned_cols=24  Identities=25%  Similarity=0.297  Sum_probs=22.9

Q ss_pred             CCcccccccccCChHHHhhhhhhc
Q 015261            3 GLTCNSCNREFNDDAEQKLHYKSD   26 (410)
Q Consensus         3 ~ftC~~C~~~F~~~~~qr~H~ksd   26 (410)
                      ||+|..||..|.....++.|+++.
T Consensus         1 pYqC~~CG~~F~~~s~l~~H~r~~   24 (44)
T PHA00616          1 MYQCLRCGGIFRKKKEVIEHLLSV   24 (44)
T ss_pred             CCccchhhHHHhhHHHHHHHHHHh
Confidence            699999999999999999999995

>PF13465 zf-H2C2_2: Zinc-finger double domain; PDB: 2EN7_A 1TF6_A 1TF3_A 2ELT_A 2EOS_A 2EN2_A 2DMD_A 2WBS_A 2WBU_A 2EM5_A

Probab=95.55  E-value=0.0074  Score=37.93  Aligned_cols=20  Identities=25%  Similarity=0.743  Sum_probs=16.3

Q ss_pred             hcCCCCCcccccCcCCccCC
Q 015261           59 NKNATPMTYSCGLCGKGYRS   78 (410)
Q Consensus        59 ~~~~~~~~~~C~~C~K~f~s   78 (410)
                      ..+.++++|.|+.|+|.|.+
T Consensus         7 ~~H~~~k~~~C~~C~k~F~~   26 (26)
T PF13465_consen    7 RTHTGEKPYKCPYCGKSFSN   26 (26)
T ss_dssp             HHHSSSSSEEESSSSEEESS
T ss_pred             hhcCCCCCCCCCCCcCeeCc
Confidence            33567899999999999974

...

>PF05605 zf-Di19: Drought induced 19 protein (Di19), zinc-binding; InterPro: IPR008598 This entry consists of several drought induced 19 (Di19) like and RING finger 114 proteins

Probab=95.55  E-value=0.023  Score=41.95  Aligned_cols=50  Identities=14%  Similarity=0.335  Sum_probs=38.5

Q ss_pred             CcccCCCCCCCCChhHHhhhhhhhhcCCCCCcccccChHHHHHHHHhHhcCCccccccCCCCcccCCHHHHHHHHHh
Q 015261          182 PACCFMCDLPHDAIENCMVHMHKCHGFFIPDVEYLKDPKGLLTYLGLKVKRDFMCLYCNDRCHPFNSLEAVRKHMEA  258 (410)
Q Consensus       182 p~~ClfC~~~f~~~~~~~~HM~~~Hgf~ip~~~~lvd~~gLl~yl~~ki~~~~~Cl~C~~~gk~F~s~~alr~HM~~  258 (410)
                      .+.|+||++ .-+...|+.|....|...                     .....|..|.   ..+.  ..+..||..
T Consensus         2 ~f~CP~C~~-~~~~~~L~~H~~~~H~~~---------------------~~~v~CPiC~---~~~~--~~l~~Hl~~   51 (54)
T PF05605_consen    2 SFTCPYCGK-GFSESSLVEHCEDEHRSE---------------------SKNVVCPICS---SRVT--DNLIRHLNS   51 (54)
T ss_pred             CcCCCCCCC-ccCHHHHHHHHHhHCcCC---------------------CCCccCCCch---hhhh--hHHHHHHHH
Confidence            368999999 567889999999988731                     1257999998   4433  488999975

Di19 has been found to be strongly expressed in both the roots and leaves of Arabidopsis thaliana during progressive drought [], whilst RING finger proteins are thought to play a role in spermatogenesis. The precise function is unknown.

>PF13465 zf-H2C2_2: Zinc-finger double domain; PDB: 2EN7_A 1TF6_A 1TF3_A 2ELT_A 2EOS_A 2EN2_A 2DMD_A 2WBS_A 2WBU_A 2EM5_A

Probab=95.41  E-value=0.0082  Score=37.72  Aligned_cols=26  Identities=31%  Similarity=0.772  Sum_probs=20.6

Q ss_pred             HHhhhhhhhhcCCCCCcccccChHHHHHHHHhHhcCCccccccCCCCcccCC
Q 015261          197 NCMVHMHKCHGFFIPDVEYLKDPKGLLTYLGLKVKRDFMCLYCNDRCHPFNS  248 (410)
Q Consensus       197 ~~~~HM~~~Hgf~ip~~~~lvd~~gLl~yl~~ki~~~~~Cl~C~~~gk~F~s  248 (410)
                      +|..||++|.|                       ..+|.|..|+   +.|.+
T Consensus         1 ~l~~H~~~H~~-----------------------~k~~~C~~C~---k~F~~   26 (26)
T PF13465_consen    1 NLRRHMRTHTG-----------------------EKPYKCPYCG---KSFSN   26 (26)
T ss_dssp             HHHHHHHHHSS-----------------------SSSEEESSSS---EEESS
T ss_pred             CHHHHhhhcCC-----------------------CCCCCCCCCc---CeeCc
Confidence            46789998766                       3489999999   88864

...

>KOG3408 consensus U1-like Zn-finger-containing protein, probabl erole in RNA processing/splicing [RNA processing and modification]

Probab=95.16  E-value=0.0057  Score=52.41  Aligned_cols=81  Identities=22%  Similarity=0.335  Sum_probs=50.3

Q ss_pred             hHHHhhhhhhccccchhhhhhc--CCCCCCHHHHHHHHHHHHHhhhcC--CCCCcccccCcCCccCChHHHHHHHhhhhh
Q 015261           16 DAEQKLHYKSDWHRYNLKRKVA--GVPGVTEALFLARQAALAQEKNKN--ATPMTYSCGLCGKGYRSSKALAQHLNSRSH   91 (410)
Q Consensus        16 ~~~qr~H~ksdwHrYNlKRrva--~Lppvs~~~F~~k~~~l~~~~~~~--~~~~~~~C~~C~K~f~s~~~l~~Hl~skkH   91 (410)
                      .+.-+.|.+++-||-|.-|.-+  +|+-|..+.=..+ ..+.......  -|--.|+|..|.+-|.+..+++.|.++|.|
T Consensus         4 ~s~r~k~~~~~~hr~~r~r~~~r~dLDqi~~dl~~~~-~kll~~~~D~dlPG~GqfyCi~CaRyFi~~~~l~~H~ktK~H   82 (129)
T KOG3408|consen    4 VSVRRKHHRSNRHRINRTRGRARKDLDQIDEDLETQK-GKLLNQEIDPDLPGGGQFYCIECARYFIDAKALKTHFKTKVH   82 (129)
T ss_pred             cccccccccchhHHHHhhhccCccccccccccccccc-chhhcCcCCCCCCCCceeehhhhhhhhcchHHHHHHHhccHH
Confidence            3445667777778777554333  3444433322211 1111111111  133469999999999999999999999999


Q ss_pred             hhhhcc
Q 015261           92 IMRASQ   97 (410)
Q Consensus        92 k~~~~~   97 (410)
                      |.|+++
T Consensus        83 KrRvK~   88 (129)
T KOG3408|consen   83 KRRVKE   88 (129)
T ss_pred             HHHHHh
Confidence            997664

>PF13909 zf-H2C2_5: C2H2-type zinc-finger domain; PDB: 1X5W_A

Probab=94.60  E-value=0.015  Score=35.51  Aligned_cols=24  Identities=21%  Similarity=0.365  Sum_probs=19.7

Q ss_pred             cccCCCCCCCCChhHHhhhhhhhhc
Q 015261          183 ACCFMCDLPHDAIENCMVHMHKCHG  207 (410)
Q Consensus       183 ~~ClfC~~~f~~~~~~~~HM~~~Hg  207 (410)
                      ++|.+|+.... ...+..||..+|+
T Consensus         1 y~C~~C~y~t~-~~~l~~H~~~~H~   24 (24)
T PF13909_consen    1 YKCPHCSYSTS-KSNLKRHLKRHHP   24 (24)
T ss_dssp             EE-SSSS-EES-HHHHHHHHHHHHS
T ss_pred             CCCCCCCCcCC-HHHHHHHHHhhCc
Confidence            47999999888 8899999999986

>COG5189 SFP1 Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division and chromosome partitioning]

Probab=94.28  E-value=0.01  Score=58.67  Aligned_cols=69  Identities=25%  Similarity=0.507  Sum_probs=51.6

Q ss_pred             CCCcccc--cccccCChHHHhhhhhhccccchhhhhhcCCC-CCCHHHHHHHHHHHHHhhhcCCCCCcccccCcCCccCC
Q 015261            2 PGLTCNS--CNREFNDDAEQKLHYKSDWHRYNLKRKVAGVP-GVTEALFLARQAALAQEKNKNATPMTYSCGLCGKGYRS   78 (410)
Q Consensus         2 ~~ftC~~--C~~~F~~~~~qr~H~ksdwHrYNlKRrva~Lp-pvs~~~F~~k~~~l~~~~~~~~~~~~~~C~~C~K~f~s   78 (410)
                      -||.|..  |.+++.++..|+.||.--+-  |-  +...-| |+.-+.|..             ..++|.|.+|+|.|+.
T Consensus       348 KpykCpV~gC~K~YknqnGLKYH~lhGH~--~~--~~~~~p~p~~~~~F~~-------------~~KPYrCevC~KRYKN  410 (423)
T COG5189         348 KPYKCPVEGCNKKYKNQNGLKYHMLHGHQ--NQ--KLHENPSPEKMNIFSA-------------KDKPYRCEVCDKRYKN  410 (423)
T ss_pred             ceecCCCCCchhhhccccchhhhhhcccc--Cc--ccCCCCCccccccccc-------------cCCceeccccchhhcc
Confidence            3799966  99999999999999997631  21  112223 666666632             3479999999999999


Q ss_pred             hHHHHHHHh
Q 015261           79 SKALAQHLN   87 (410)
Q Consensus        79 ~~~l~~Hl~   87 (410)
                      .+.|+-|..
T Consensus       411 lNGLKYHr~  419 (423)
T COG5189         411 LNGLKYHRK  419 (423)
T ss_pred             Cccceeccc
Confidence            999988864

>KOG1146 consensus Homeobox protein [General function prediction only]

Probab=94.07  E-value=0.059  Score=62.09  Aligned_cols=82  Identities=22%  Similarity=0.314  Sum_probs=59.7

Q ss_pred             CCcccccccccCChHHHhhhhhhccccchhhhhhcCCCCCCHHHHHHHHHHHHHhhhcCCCCCcccccCcCCccCChHHH
Q 015261            3 GLTCNSCNREFNDDAEQKLHYKSDWHRYNLKRKVAGVPGVTEALFLARQAALAQEKNKNATPMTYSCGLCGKGYRSSKAL   82 (410)
Q Consensus         3 ~ftC~~C~~~F~~~~~qr~H~ksdwHrYNlKRrva~Lppvs~~~F~~k~~~l~~~~~~~~~~~~~~C~~C~K~f~s~~~l   82 (410)
                      .|.|..|+..|+.++.|-.|||+-+|-.+..+-.++.+-          ..+++......+-.+|.|.+|.-++.+...|
T Consensus       465 t~~cpkc~~~yk~a~~L~vhmRskhp~~~~~~c~~gq~~----------~~~arg~~~~~~~~p~~C~~C~~stttng~L  534 (1406)
T KOG1146|consen  465 TLKCPKCNWHYKLAQTLGVHMRSKHPESQSAYCKAGQNH----------PRLARGEVYRCPGKPYPCRACNYSTTTNGNL  534 (1406)
T ss_pred             cccCCccchhhhhHHHhhhcccccccccchhHhHhcccc----------ccccccccccCCCCcccceeeeeeeecchHH
Confidence            478999999999999999999998776665333333220          0011111112234679999999999999999


Q ss_pred             HHHHhhhhhhhh
Q 015261           83 AQHLNSRSHIMR   94 (410)
Q Consensus        83 ~~Hl~skkHk~~   94 (410)
                      ..||.|-+|+.+
T Consensus       535 sihlqS~~h~~~  546 (1406)
T KOG1146|consen  535 SIHLQSDLHRNE  546 (1406)
T ss_pred             HHHHHHHhhHHH
Confidence            999999999874

>PLN03086 PRLI-interacting factor K; Provisional

Probab=93.96  E-value=0.11  Score=56.06  Aligned_cols=73  Identities=14%  Similarity=0.232  Sum_probs=51.5

Q ss_pred             CcccCCCCCCCCChhHHhhhhhhhhcCCCCCcccccChHHHHHHHHhHhc-CCccccccCCCCcccC----------CHH
Q 015261          182 PACCFMCDLPHDAIENCMVHMHKCHGFFIPDVEYLKDPKGLLTYLGLKVK-RDFMCLYCNDRCHPFN----------SLE  250 (410)
Q Consensus       182 p~~ClfC~~~f~~~~~~~~HM~~~Hgf~ip~~~~lvd~~gLl~yl~~ki~-~~~~Cl~C~~~gk~F~----------s~~  250 (410)
                      +..|.+|+..|. ...+..||..+|.-+.+.+........|..|+...-. .++.|.+|+   +.|.          .+.
T Consensus       453 H~~C~~Cgk~f~-~s~LekH~~~~Hkpv~CpCg~~~~R~~L~~H~~thCp~Kpi~C~fC~---~~v~~g~~~~d~~d~~s  528 (567)
T PLN03086        453 HVHCEKCGQAFQ-QGEMEKHMKVFHEPLQCPCGVVLEKEQMVQHQASTCPLRLITCRFCG---DMVQAGGSAMDVRDRLR  528 (567)
T ss_pred             CccCCCCCCccc-hHHHHHHHHhcCCCccCCCCCCcchhHHHhhhhccCCCCceeCCCCC---CccccCccccchhhhhh
Confidence            457999999996 6789999999885444434344566777777653322 378999999   6663          255


Q ss_pred             HHHHHHHh
Q 015261          251 AVRKHMEA  258 (410)
Q Consensus       251 alr~HM~~  258 (410)
                      .|..|+..
T Consensus       529 ~Lt~HE~~  536 (567)
T PLN03086        529 GMSEHESI  536 (567)
T ss_pred             hHHHHHHh
Confidence            88888876

>smart00355 ZnF_C2H2 zinc finger

Probab=93.50  E-value=0.055  Score=32.45  Aligned_cols=21  Identities=43%  Similarity=0.947  Sum_probs=19.6

Q ss_pred             ccccCcCCccCChHHHHHHHh
Q 015261           67 YSCGLCGKGYRSSKALAQHLN   87 (410)
Q Consensus        67 ~~C~~C~K~f~s~~~l~~Hl~   87 (410)
                      |.|..|++.|.+...+..|++
T Consensus         1 ~~C~~C~~~f~~~~~l~~H~~   21 (26)
T smart00355        1 YRCPECGKVFKSKSALKEHMR   21 (26)
T ss_pred             CCCCCCcchhCCHHHHHHHHH
Confidence            579999999999999999998

>KOG3408 consensus U1-like Zn-finger-containing protein, probabl erole in RNA processing/splicing [RNA processing and modification]

Probab=93.13  E-value=0.047  Score=46.89  Aligned_cols=37  Identities=35%  Similarity=0.578  Sum_probs=33.4

Q ss_pred             CCCcccccccccCChHHHhhhhhhccccchhhhhhcCCCCC
Q 015261            2 PGLTCNSCNREFNDDAEQKLHYKSDWHRYNLKRKVAGVPGV   42 (410)
Q Consensus         2 ~~ftC~~C~~~F~~~~~qr~H~ksdwHrYNlKRrva~Lppv   42 (410)
                      ..|.|..|..-|.+...+..|+||--|    ||||..|.++
T Consensus        56 GqfyCi~CaRyFi~~~~l~~H~ktK~H----KrRvK~l~~~   92 (129)
T KOG3408|consen   56 GQFYCIECARYFIDAKALKTHFKTKVH----KRRVKELREV   92 (129)
T ss_pred             ceeehhhhhhhhcchHHHHHHHhccHH----HHHHHhcccC
Confidence            468999999999999999999999988    8999998743

>KOG2785 consensus C2H2-type Zn-finger protein [General function prediction only]

Probab=92.90  E-value=0.1  Score=53.04  Aligned_cols=79  Identities=18%  Similarity=0.423  Sum_probs=54.4

Q ss_pred             CCcccccccccCChHHHhhhhhhccccchhhhhhcCCCCCCHHHHHHHHHHHHHhhhcCCCCCcccccCcC---CccCCh
Q 015261            3 GLTCNSCNREFNDDAEQKLHYKSDWHRYNLKRKVAGVPGVTEALFLARQAALAQEKNKNATPMTYSCGLCG---KGYRSS   79 (410)
Q Consensus         3 ~ftC~~C~~~F~~~~~qr~H~ksdwHrYNlKRrva~Lppvs~~~F~~k~~~l~~~~~~~~~~~~~~C~~C~---K~f~s~   79 (410)
                      |--|++|...|.+-+.-+.||..+ |.+=|       |   .-++..-..-|..-... .....|.|..|+   +.|.+.
T Consensus       166 Pt~CLfC~~~~k~~e~~~~HM~~~-HgffI-------P---dreYL~D~~GLl~YLge-KV~~~~~CL~CN~~~~~f~sl  233 (390)
T KOG2785|consen  166 PTDCLFCDKKSKSLEENLKHMFKE-HGFFI-------P---DREYLTDEKGLLKYLGE-KVGIGFICLFCNELGRPFSSL  233 (390)
T ss_pred             CcceeecCCCcccHHHHHHHHhhc-cCCcC-------C---chHhhhchhHHHHHHHH-HhccCceEEEeccccCccccc
Confidence            346999999999999999999998 63322       3   22333222111110000 012468899998   999999


Q ss_pred             HHHHHHHhhhhhhh
Q 015261           80 KALAQHLNSRSHIM   93 (410)
Q Consensus        80 ~~l~~Hl~skkHk~   93 (410)
                      .+...||..|.|-.
T Consensus       234 eavr~HM~~K~HCk  247 (390)
T KOG2785|consen  234 EAVRAHMRDKGHCK  247 (390)
T ss_pred             HHHHHHHhhccCcc
Confidence            99999999999976

>KOG2231 consensus Predicted E3 ubiquitin ligase [Posttranslational modification, protein turnover, chaperones]

Probab=92.01  E-value=0.16  Score=55.50  Aligned_cols=79  Identities=20%  Similarity=0.388  Sum_probs=58.4

Q ss_pred             CcccCCCCCCCCChhHHhhhhhhhhcCCCCCc-----cc------ccChHHHHHHHH-----hHhcCC-ccccccCCCCc
Q 015261          182 PACCFMCDLPHDAIENCMVHMHKCHGFFIPDV-----EY------LKDPKGLLTYLG-----LKVKRD-FMCLYCNDRCH  244 (410)
Q Consensus       182 p~~ClfC~~~f~~~~~~~~HM~~~Hgf~ip~~-----~~------lvd~~gLl~yl~-----~ki~~~-~~Cl~C~~~gk  244 (410)
                      -..|++| ..|.++..|..||...|.++.+..     ++      ++....|+.|+.     ++...+ -.|.+|.   .
T Consensus       115 ~~~~~~c-~~~~s~~~Lk~H~~~~H~~~~c~lC~~~~kif~~e~k~Yt~~el~~h~~~gd~d~~s~rGhp~C~~C~---~  190 (669)
T KOG2231|consen  115 KKECLHC-TEFKSVENLKNHMRDQHKLHLCSLCLQNLKIFINERKLYTRAELNLHLMFGDPDDESCRGHPLCKFCH---E  190 (669)
T ss_pred             cCCCccc-cchhHHHHHHHHHHHhhhhhccccccccceeeeeeeehehHHHHHHHHhcCCCccccccCCccchhhh---h
Confidence            3468888 888899999999999999887543     22      356677777754     222334 5899999   8


Q ss_pred             ccCCHHHHHHHHHh-cCCccc
Q 015261          245 PFNSLEAVRKHMEA-KRHCKI  264 (410)
Q Consensus       245 ~F~s~~alr~HM~~-k~HCki  264 (410)
                      .|-....|+.||+. +-+|.+
T Consensus       191 ~fld~~el~rH~~~~h~~chf  211 (669)
T KOG2231|consen  191 RFLDDDELYRHLRFDHEFCHF  211 (669)
T ss_pred             hhccHHHHHHhhccceeheee
Confidence            89999999999985 445544

>smart00355 ZnF_C2H2 zinc finger

Probab=91.80  E-value=0.17  Score=30.21  Aligned_cols=22  Identities=32%  Similarity=0.729  Sum_probs=20.1

Q ss_pred             ccccccCCCCcccCCHHHHHHHHHh
Q 015261          234 FMCLYCNDRCHPFNSLEAVRKHMEA  258 (410)
Q Consensus       234 ~~Cl~C~~~gk~F~s~~alr~HM~~  258 (410)
                      +.|..|+   +.|.+...++.||+.
T Consensus         1 ~~C~~C~---~~f~~~~~l~~H~~~   22 (26)
T smart00355        1 YRCPECG---KVFKSKSALKEHMRT   22 (26)
T ss_pred             CCCCCCc---chhCCHHHHHHHHHH
Confidence            4799999   999999999999984

>KOG2231 consensus Predicted E3 ubiquitin ligase [Posttranslational modification, protein turnover, chaperones]

Probab=90.67  E-value=0.59  Score=51.16  Aligned_cols=69  Identities=20%  Similarity=0.345  Sum_probs=52.1

Q ss_pred             ccCCCCCCCCChhHHhhhhhhhhcCCC-CC-c----ccccChHHHHHHHHhHhcCCcccc--ccCCCCcccCCHHHHHHH
Q 015261          184 CCFMCDLPHDAIENCMVHMHKCHGFFI-PD-V----EYLKDPKGLLTYLGLKVKRDFMCL--YCNDRCHPFNSLEAVRKH  255 (410)
Q Consensus       184 ~ClfC~~~f~~~~~~~~HM~~~Hgf~i-p~-~----~~lvd~~gLl~yl~~ki~~~~~Cl--~C~~~gk~F~s~~alr~H  255 (410)
                      .|.||...|-...++..||+.+|=|-+ ++ .    +|.-+-.+|-.|..+.   .+.|-  .|..  +.|...-.+..|
T Consensus       184 ~C~~C~~~fld~~el~rH~~~~h~~chfC~~~~~~neyy~~~~dLe~HfR~~---HflCE~~~C~~--~~f~~~~~~ei~  258 (669)
T KOG2231|consen  184 LCKFCHERFLDDDELYRHLRFDHEFCHFCDYKTGQNEYYNDYDDLEEHFRKG---HFLCEEEFCRT--KKFYVAFELEIE  258 (669)
T ss_pred             cchhhhhhhccHHHHHHhhccceeheeecCcccccchhcccchHHHHHhhhc---Ccccccccccc--ceeeehhHHHHH
Confidence            799999999999999999999887644 32 1    4556778888876654   57898  8874  567666566666


Q ss_pred             HH
Q 015261          256 ME  257 (410)
Q Consensus       256 M~  257 (410)
                      |+
T Consensus       259 lk  260 (669)
T KOG2231|consen  259 LK  260 (669)
T ss_pred             HH
Confidence            66

>PF09237 GAGA: GAGA factor; InterPro: IPR015318 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule

Probab=89.64  E-value=0.16  Score=37.33  Aligned_cols=27  Identities=26%  Similarity=0.364  Sum_probs=21.0

Q ss_pred             CCcccCCCCCCCCChhHHhhhhhhhhc
Q 015261          181 DPACCFMCDLPHDAIENCMVHMHKCHG  207 (410)
Q Consensus       181 ~p~~ClfC~~~f~~~~~~~~HM~~~Hg  207 (410)
                      .|..|..|+..+++..+|..||..+|+
T Consensus        23 ~PatCP~C~a~~~~srnLrRHle~~H~   49 (54)
T PF09237_consen   23 QPATCPICGAVIRQSRNLRRHLEIRHF   49 (54)
T ss_dssp             --EE-TTT--EESSHHHHHHHHHHHTT
T ss_pred             CCCCCCcchhhccchhhHHHHHHHHhc
Confidence            678999999999999999999999887

Some of these domains bind zinc, but many do not; instead binding other metals such as iron, or no metal at all. For example, some family members form salt bridges to stabilise the finger-like folds. They were first identified as a DNA-binding motif in transcription factor TFIIIA from Xenopus laevis (African clawed frog), however they are now recognised to bind DNA, RNA, protein and/or lipid substrates [, , , , ]. Their binding properties depend on the amino acid sequence of the finger domains and of the linker between fingers, as well as on the higher-order structures and the number of fingers. Znf domains are often found in clusters, where fingers can have different binding specificities. There are many superfamilies of Znf motifs, varying in both sequence and structure. They display considerable versatility in binding modes, even between members of the same class (e.g. some bind DNA, others protein), suggesting that Znf motifs are stable scaffolds that have evolved specialised functions. For example, Znf-containing proteins function in gene transcription, translation, mRNA trafficking, cytoskeleton organisation, epithelial development, cell adhesion, protein folding, chromatin remodelling and zinc sensing, to name but a few []. Zinc-binding motifs are stable structures, and they rarely undergo conformational changes upon binding their target. Members of this entry bind to a 5'-GAGAG-3' DNA consensus binding site, and contain a Cys2-His2 zinc finger core as well as an N-terminal extension containing two highly basic regions. The zinc finger core binds in the DNA major groove and recognises the first three GAG bases of the consensus in a manner similar to that seen in other classical zinc finger-DNA complexes. The second basic region forms a helix that interacts in the major groove recognising the last G of the consensus, while the first basic region wraps around the DNA in the minor groove and recognises the A in the fourth position of the consensus sequence []. More information about these proteins can be found at Protein of the Month: Zinc Fingers [].; PDB: 1YUI_A 1YUJ_A.

>KOG1146 consensus Homeobox protein [General function prediction only]

Probab=84.85  E-value=0.38  Score=55.74  Aligned_cols=80  Identities=21%  Similarity=0.255  Sum_probs=51.8

Q ss_pred             CCCcccCCCCCCCCChhHHhhhhhhhhc-CCC----------------------CCcccccChHHHHHHHHhHhcCCccc
Q 015261          180 FDPACCFMCDLPHDAIENCMVHMHKCHG-FFI----------------------PDVEYLKDPKGLLTYLGLKVKRDFMC  236 (410)
Q Consensus       180 i~p~~ClfC~~~f~~~~~~~~HM~~~Hg-f~i----------------------p~~~~lvd~~gLl~yl~~ki~~~~~C  236 (410)
                      ..|+.|.-|...+++..+|..||..--. ..+                      |+..-+.+..|.-.   -+..-...|
T Consensus       516 ~~p~~C~~C~~stttng~LsihlqS~~h~~~lee~~~~~g~~v~~~~~~v~s~~P~~ag~~~~ags~~---pktkP~~~C  592 (1406)
T KOG1146|consen  516 GKPYPCRACNYSTTTNGNLSIHLQSDLHRNELEEAEENAGEQVRLLPASVTSAVPEEAGLGPSAGSSG---PKTKPSWRC  592 (1406)
T ss_pred             CCcccceeeeeeeecchHHHHHHHHHhhHHHHHHHHhccccchhhhhhhhcccCcccccCCCCCCCCC---CCCCCCcch
Confidence            4789999999999999999999986322 110                      00001111111111   122234689


Q ss_pred             cccCCCCcccCCHHHHHHHHHhcCCcccC
Q 015261          237 LYCNDRCHPFNSLEAVRKHMEAKRHCKIH  265 (410)
Q Consensus       237 l~C~~~gk~F~s~~alr~HM~~k~HCki~  265 (410)
                      ..|++   .-.-..+|+.||....|...|
T Consensus       593 ~vc~y---etniarnlrihmtss~~s~~p  618 (1406)
T KOG1146|consen  593 EVCSY---ETNIARNLRIHMTASPSSSPP  618 (1406)
T ss_pred             hhhcc---hhhhhhccccccccCCCCCCh
Confidence            99984   446788999999999998885

>KOG4173 consensus Alpha-SNAP protein [Intracellular trafficking, secretion, and vesicular transport]

Probab=84.13  E-value=0.6  Score=43.88  Aligned_cols=63  Identities=25%  Similarity=0.546  Sum_probs=46.2

Q ss_pred             cccccccccCChHHHhhhhhhccccchhhhhhcCCCCCCHHHHHHHHHHHHHhhhcCCCCCcccc--cCcCCccCChHHH
Q 015261            5 TCNSCNREFNDDAEQKLHYKSDWHRYNLKRKVAGVPGVTEALFLARQAALAQEKNKNATPMTYSC--GLCGKGYRSSKAL   82 (410)
Q Consensus         5 tC~~C~~~F~~~~~qr~H~ksdwHrYNlKRrva~Lppvs~~~F~~k~~~l~~~~~~~~~~~~~~C--~~C~K~f~s~~~l   82 (410)
                      .|..|...|++.-+|-.|+- +||-               ..|..+++         .|..-|.|  .-|.-+|++..+-
T Consensus       108 sCs~C~r~~Pt~hLLd~HI~-E~HD---------------s~Fqa~ve---------RG~dMy~ClvEgCt~KFkT~r~R  162 (253)
T KOG4173|consen  108 SCSFCKRAFPTGHLLDAHIL-EWHD---------------SLFQALVE---------RGQDMYQCLVEGCTEKFKTSRDR  162 (253)
T ss_pred             hhHHHHHhCCchhhhhHHHH-HHHH---------------HHHHHHHH---------cCccHHHHHHHhhhhhhhhhhhh
Confidence            69999999999999999985 6881               13444333         14456788  4588899999999


Q ss_pred             HHHHhhhhhhh
Q 015261           83 AQHLNSRSHIM   93 (410)
Q Consensus        83 ~~Hl~skkHk~   93 (410)
                      +.||.. +||.
T Consensus       163 kdH~I~-~Hk~  172 (253)
T KOG4173|consen  163 KDHMIR-MHKY  172 (253)
T ss_pred             hhHHHH-hccC
Confidence            999965 4554

>PF12013 DUF3505: Protein of unknown function (DUF3505); InterPro: IPR022698 This family of proteins is functionally uncharacterised

Probab=83.69  E-value=2  Score=36.14  Aligned_cols=27  Identities=26%  Similarity=0.351  Sum_probs=25.0

Q ss_pred             CCccc----CCCCCCCCChhHHhhhhhhhhc
Q 015261          181 DPACC----FMCDLPHDAIENCMVHMHKCHG  207 (410)
Q Consensus       181 ~p~~C----lfC~~~f~~~~~~~~HM~~~Hg  207 (410)
                      +-+.|    ..|++...+...+.+|++.+||
T Consensus        79 ~G~~C~~~~~~C~y~~~~~~~m~~H~~~~Hg  109 (109)
T PF12013_consen   79 DGYRCQCDPPHCGYITRSKKTMRKHWRKEHG  109 (109)
T ss_pred             CCeeeecCCCCCCcEeccHHHHHHHHHHhcC
Confidence            55789    9999999999999999999997

This protein is found in eukaryotes. Proteins in this family are typically between 247 to 1018 amino acids in length. This region contains two segments that are likely to be C2H2 zinc binding domains.

>COG5236 Uncharacterized conserved protein, contains RING Zn-finger [General function prediction only]

Probab=82.74  E-value=0.46  Score=47.79  Aligned_cols=79  Identities=20%  Similarity=0.393  Sum_probs=55.4

Q ss_pred             cccCC--CCCCCCChhHHhhhhhhhhcCCCCCc-----c------cccChHHHHHHHH--hHh-c--CCccccccCCCCc
Q 015261          183 ACCFM--CDLPHDAIENCMVHMHKCHGFFIPDV-----E------YLKDPKGLLTYLG--LKV-K--RDFMCLYCNDRCH  244 (410)
Q Consensus       183 ~~Clf--C~~~f~~~~~~~~HM~~~Hgf~ip~~-----~------~lvd~~gLl~yl~--~ki-~--~~~~Cl~C~~~gk  244 (410)
                      +.|+.  |......+-++..|....|+++|++.     .      .|....||-+|-.  ..- +  ...+|.+|+   .
T Consensus       152 F~CP~skc~~~C~~~k~lk~H~K~~H~~~~C~~C~~nKk~F~~E~~lF~~~~Lr~H~~~G~~e~GFKGHP~C~FC~---~  228 (493)
T COG5236         152 FKCPKSKCHRRCGSLKELKKHYKAQHGFVLCSECIGNKKDFWNEIRLFRSSTLRDHKNGGLEEEGFKGHPLCIFCK---I  228 (493)
T ss_pred             hcCCchhhhhhhhhHHHHHHHHHhhcCcEEhHhhhcCcccCccceeeeecccccccccCCccccCcCCCchhhhcc---c
Confidence            44543  55566679999999999999999865     1      1345667776621  110 0  124899999   8


Q ss_pred             ccCCHHHHHHHHHhcC-Cccc
Q 015261          245 PFNSLEAVRKHMEAKR-HCKI  264 (410)
Q Consensus       245 ~F~s~~alr~HM~~k~-HCki  264 (410)
                      .|.+-..|..||+.++ -|-|
T Consensus       229 ~FYdDDEL~~HcR~~HE~ChI  249 (493)
T COG5236         229 YFYDDDELRRHCRLRHEACHI  249 (493)
T ss_pred             eecChHHHHHHHHhhhhhhhh
Confidence            9999999999999864 4433

>COG5236 Uncharacterized conserved protein, contains RING Zn-finger [General function prediction only]

Probab=82.38  E-value=1.3  Score=44.74  Aligned_cols=72  Identities=19%  Similarity=0.428  Sum_probs=56.5

Q ss_pred             ccCCCCCCCCChhHHhhhhhhhhc-CCCCCc------ccccChHHHHHHHHhHhcCCccccc--cC-CCCcccCCHHHHH
Q 015261          184 CCFMCDLPHDAIENCMVHMHKCHG-FFIPDV------EYLKDPKGLLTYLGLKVKRDFMCLY--CN-DRCHPFNSLEAVR  253 (410)
Q Consensus       184 ~ClfC~~~f~~~~~~~~HM~~~Hg-f~ip~~------~~lvd~~gLl~yl~~ki~~~~~Cl~--C~-~~gk~F~s~~alr  253 (410)
                      .|.||...|-+-.+|..||+..|- -+|+|.      .|+.+...|-.|...-   .|.|.+  |- .+..+|...-.|+
T Consensus       222 ~C~FC~~~FYdDDEL~~HcR~~HE~ChICD~v~p~~~QYFK~Y~~Le~HF~~~---hy~ct~qtc~~~k~~vf~~~~el~  298 (493)
T COG5236         222 LCIFCKIYFYDDDELRRHCRLRHEACHICDMVGPIRYQYFKSYEDLEAHFRNA---HYCCTFQTCRVGKCYVFPYHTELL  298 (493)
T ss_pred             hhhhccceecChHHHHHHHHhhhhhhhhhhccCccchhhhhCHHHHHHHhhcC---ceEEEEEEEecCcEEEeccHHHHH
Confidence            799999999999999999999884 566655      7899999999986532   456654  42 2336899999999


Q ss_pred             HHHHh
Q 015261          254 KHMEA  258 (410)
Q Consensus       254 ~HM~~  258 (410)
                      .|...
T Consensus       299 ~h~~~  303 (493)
T COG5236         299 EHLTR  303 (493)
T ss_pred             HHHHH
Confidence            99875

>COG5112 UFD2 U1-like Zn-finger-containing protein [General function prediction only]

Probab=81.47  E-value=0.52  Score=39.71  Aligned_cols=35  Identities=26%  Similarity=0.352  Sum_probs=30.5

Q ss_pred             CCCcccccCcCCccCChHHHHHHHhhhhhhhhhcc
Q 015261           63 TPMTYSCGLCGKGYRSSKALAQHLNSRSHIMRASQ   97 (410)
Q Consensus        63 ~~~~~~C~~C~K~f~s~~~l~~Hl~skkHk~~~~~   97 (410)
                      +.-.++|..|.+-|-+..+|..|.++|-|+.+++.
T Consensus        52 GlGqhYCieCaryf~t~~aL~~HkkgkvHkRR~Ke   86 (126)
T COG5112          52 GLGQHYCIECARYFITEKALMEHKKGKVHKRRAKE   86 (126)
T ss_pred             CCceeeeehhHHHHHHHHHHHHHhccchhHHHHHH
Confidence            33468899999999999999999999999987654

>PLN02748 tRNA dimethylallyltransferase

Probab=81.38  E-value=0.93  Score=48.03  Aligned_cols=32  Identities=31%  Similarity=0.598  Sum_probs=28.7

Q ss_pred             CcccccCcCC-ccCChHHHHHHHhhhhhhhhhc
Q 015261           65 MTYSCGLCGK-GYRSSKALAQHLNSRSHIMRAS   96 (410)
Q Consensus        65 ~~~~C~~C~K-~f~s~~~l~~Hl~skkHk~~~~   96 (410)
                      +.|.|.+|++ .+.....+..|++|++|+.+.+
T Consensus       417 ~~~~Ce~C~~~~~~G~~eW~~Hlksr~Hk~~~~  449 (468)
T PLN02748        417 TQYVCEACGNKVLRGAHEWEQHKQGRGHRKRVQ  449 (468)
T ss_pred             ccccccCCCCcccCCHHHHHHHhcchHHHHHHh
Confidence            5688999997 8999999999999999998644

>PF13821 DUF4187: Domain of unknown function (DUF4187)

Probab=80.73  E-value=1.6  Score=32.58  Aligned_cols=29  Identities=24%  Similarity=0.598  Sum_probs=22.8

Q ss_pred             hHHHHHHHHhHhcCCccccccCCCCcccCCHHHHH
Q 015261          219 PKGLLTYLGLKVKRDFMCLYCNDRCHPFNSLEAVR  253 (410)
Q Consensus       219 ~~gLl~yl~~ki~~~~~Cl~C~~~gk~F~s~~alr  253 (410)
                      +..|+.||+.+   .+-|.||+   -.|.+.+.|.
T Consensus        16 L~~l~~YLR~~---~~YC~~Cg---~~Y~d~~dL~   44 (55)
T PF13821_consen   16 LDKLLSYLREE---HNYCFWCG---TKYDDEEDLE   44 (55)
T ss_pred             HHHHHHHHHhh---CceeeeeC---CccCCHHHHH
Confidence            45678888766   57899999   7888887765

>PF06220 zf-U1: U1 zinc finger; InterPro: IPR013085 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule

Probab=80.45  E-value=1.2  Score=30.69  Aligned_cols=30  Identities=27%  Similarity=0.382  Sum_probs=16.8

Q ss_pred             cccccCcCCcc-CCh-HHHHHHHhhhhhhhhh
Q 015261           66 TYSCGLCGKGY-RSS-KALAQHLNSRSHIMRA   95 (410)
Q Consensus        66 ~~~C~~C~K~f-~s~-~~l~~Hl~skkHk~~~   95 (410)
                      .|.|..|++.| .+. ..-++|.+..+|+.+.
T Consensus         3 ryyCdyC~~~~~~d~~~~Rk~H~~G~kH~~nv   34 (38)
T PF06220_consen    3 RYYCDYCKKYLTHDSPSIRKQHERGWKHKENV   34 (38)
T ss_dssp             S-B-TTT--B-S--SHHHHHHHT--THHHHHH
T ss_pred             CeecccccceecCCChHHHHHhhccHHHHHHH
Confidence            47899999999 333 5569999999999854

Some of these domains bind zinc, but many do not; instead binding other metals such as iron, or no metal at all. For example, some family members form salt bridges to stabilise the finger-like folds. They were first identified as a DNA-binding motif in transcription factor TFIIIA from Xenopus laevis (African clawed frog), however they are now recognised to bind DNA, RNA, protein and/or lipid substrates [, , , , ]. Their binding properties depend on the amino acid sequence of the finger domains and of the linker between fingers, as well as on the higher-order structures and the number of fingers. Znf domains are often found in clusters, where fingers can have different binding specificities. There are many superfamilies of Znf motifs, varying in both sequence and structure. They display considerable versatility in binding modes, even between members of the same class (e.g. some bind DNA, others protein), suggesting that Znf motifs are stable scaffolds that have evolved specialised functions. For example, Znf-containing proteins function in gene transcription, translation, mRNA trafficking, cytoskeleton organisation, epithelial development, cell adhesion, protein folding, chromatin remodelling and zinc sensing, to name but a few []. Zinc-binding motifs are stable structures, and they rarely undergo conformational changes upon binding their target. C2H2-type (classical) zinc fingers (Znf) were the first class to be characterised. They contain a short beta hairpin and an alpha helix (beta/beta/alpha structure), where a single zinc atom is held in place by Cys(2)His(2) (C2H2) residues in a tetrahedral array. C2H2 Znf's can be divided into three groups based on the number and pattern of fingers: triple-C2H2 (binds single ligand), multiple-adjacent-C2H2 (binds multiple ligands), and separated paired-C2H2 []. C2H2 Znf's are the most common DNA-binding motifs found in eukaryotic transcription factors, and have also been identified in prokaryotes []. Transcription factors usually contain several Znf's (each with a conserved beta/beta/alpha structure) capable of making multiple contacts along the DNA, where the C2H2 Znf motifs recognise DNA sequences by binding to the major groove of DNA via a short alpha-helix in the Znf, the Znf spanning 3-4 bases of the DNA []. C2H2 Znf's can also bind to RNA and protein targets []. This entry represents a C2H2-type zinc finger motif found in several U1 small nuclear ribonucleoprotein C (U1-C) proteins. Some proteins contain multiple copies of this motif. The U1 small nuclear ribonucleoprotein (U1 snRNP) binds to the pre-mRNA 5' splice site at early stages of spliceosome assembly. Recruitment of U1 to a class of weak 5' splice site is promoted by binding of the protein TIA-1 to uridine-rich sequences immediately downstream from the 5' splice site. Binding of TIA-1 in the vicinity of a 5' splice site helps to stabilise U1 snRNP recruitment, at least in part, via a direct interaction with U1-C, thus providing one molecular mechanism for the function of this splicing regulator []. More information about these proteins can be found at Protein of the Month: Zinc Fingers [].; GO: 0008270 zinc ion binding; PDB: 2VRD_A.

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	410
1zu1_A	127	DSRBP-ZFA, RNA binding protein ZFA; zinc finger pr	8e-12
2dmi_A	115	Teashirt homolog 3; zinc finger protein 537, struc	4e-05

>1zu1_A DSRBP-ZFA, RNA binding protein ZFA; zinc finger protein, helix-loop-helix, helix-turn-helix; NMR {Xenopus laevis} SCOP: g.37.1.4 g.37.1.4 Length = 127

 Score = 61.1 bits (147), Expect = 8e-12
 Identities = 17/91 (18%), Positives = 35/91 (38%), Gaps = 2/91 (2%)

Query: 4   LTCNSCNREFNDDAEQKLHYKSDWHRYNLKRKVAGVPGVTEALFLARQAALAQEKNKNAT 63
             C  C+     ++++  HY+S  H   ++R +A   G       A++   A  +  +  
Sbjct: 33  TQCKVCSAVLISESQKLAHYQSRKHANKVRRYMAINQGEDSV--PAKKFKAAPAEISDGE 90

Query: 64  PMTYSCGLCGKGYRSSKALAQHLNSRSHIMR 94
             +  C +C   + S      H   ++HI  
Sbjct: 91  DRSKCCPVCNMTFSSPVVAESHYIGKTHIKN 121

>2dmi_A Teashirt homolog 3; zinc finger protein 537, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 115

 Score = 41.7 bits (97), Expect = 4e-05
 Identities = 17/89 (19%), Positives = 30/89 (33%), Gaps = 4/89 (4%)

Query: 4   LTCNSCNREFNDDAEQKLHYKSDWH-RYNLKRKVAGVPGVTEALFLARQAALAQEKNKNA 62
             C  C+  ++   E  +H     H R +        P         R+ +L + + K  
Sbjct: 20  FRCKDCSAAYDTLVELTVHMNETGHYRDDNHETDNNNPKRWS---KPRKRSLLEMEGKED 76

Query: 63  TPMTYSCGLCGKGYRSSKALAQHLNSRSH 91
                 C  CG  + S + L+ H+    H
Sbjct: 77  AQKVLKCMYCGHSFESLQDLSVHMIKTKH 105

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	410
2dlq_A	124	GLI-kruppel family member HKR3; ZF-C2H2 domain, st	99.53
2i13_A	190	AART; DNA binding, zinc finger, DNA binding protei	99.49
2jp9_A	119	Wilms tumor 1; DNA binding, nucleic acid recogniti	99.38
1tf6_A	190	Protein (transcription factor IIIA); complex (tran	99.34
1ubd_C	124	Protein (YY1 zinc finger domain); transcription in	99.33
2gli_A	155	Protein (five-finger GLI); protein/DNA complex, tr	99.32
2rpc_A	155	Zinc finger protein ZIC 3; ZF-C2H2, zinc finger pr	99.28
2lt7_A	133	Transcriptional regulator kaiso; zinc finger, doub	99.26
2lt7_A	133	Transcriptional regulator kaiso; zinc finger, doub	99.11
2kmk_A	82	Zinc finger protein GFI-1; tandem repeat zinc fing	99.1
2dmi_A	115	Teashirt homolog 3; zinc finger protein 537, struc	99.09
2dmd_A	96	Zinc finger protein 64, isoforms 1 and 2; ZNF338,	99.06
2kmk_A	82	Zinc finger protein GFI-1; tandem repeat zinc fing	99.06
2ee8_A	106	Protein ODD-skipped-related 2; zinc binding, ZF-C2	99.05
2yt9_A	95	Zinc finger-containing protein 1; C2H2, structural	99.04
2ee8_A	106	Protein ODD-skipped-related 2; zinc binding, ZF-C2	99.03
2i13_A	190	AART; DNA binding, zinc finger, DNA binding protei	99.02
2dmd_A	96	Zinc finger protein 64, isoforms 1 and 2; ZNF338,	99.02
1a1h_A	90	QGSR zinc finger peptide; complex (zinc finger/DNA	98.99
2yt9_A	95	Zinc finger-containing protein 1; C2H2, structural	98.99
2csh_A	110	Zinc finger protein 297B; ZF-C2H2 domain, zinc fin	98.99
1wjp_A	107	Zinc finger protein 295; ZF-C2H2 domain, zinc bind	98.96
1a1h_A	90	QGSR zinc finger peptide; complex (zinc finger/DNA	98.92
2csh_A	110	Zinc finger protein 297B; ZF-C2H2 domain, zinc fin	98.88
2dlq_A	124	GLI-kruppel family member HKR3; ZF-C2H2 domain, st	98.82
1zu1_A	127	DSRBP-ZFA, RNA binding protein ZFA; zinc finger pr	98.82
1wjp_A	107	Zinc finger protein 295; ZF-C2H2 domain, zinc bind	98.82
1llm_C	88	Chimera of ZIF23-GCN4; dimerization, DNA recogniti	98.81
2ebt_A	100	Krueppel-like factor 5; C2H2-type zinc-finger, met	98.79
2wbs_A	89	Krueppel-like factor 4; transcription-DNA complex,	98.79
4gzn_C	60	ZFP-57, zinc finger protein 57; transcription-DNA	98.77
2jp9_A	119	Wilms tumor 1; DNA binding, nucleic acid recogniti	98.77
4gzn_C	60	ZFP-57, zinc finger protein 57; transcription-DNA	98.75
2ebt_A	100	Krueppel-like factor 5; C2H2-type zinc-finger, met	98.75
1tf6_A	190	Protein (transcription factor IIIA); complex (tran	98.73
1bbo_A	57	Human enhancer-binding protein MBP-1; DNA-binding	98.73
2rpc_A	155	Zinc finger protein ZIC 3; ZF-C2H2, zinc finger pr	98.7
2gli_A	155	Protein (five-finger GLI); protein/DNA complex, tr	98.69
1ubd_C	124	Protein (YY1 zinc finger domain); transcription in	98.69
2wbs_A	89	Krueppel-like factor 4; transcription-DNA complex,	98.69
3uk3_C	57	Zinc finger protein 217; transcription factor, DNA	98.65
2dmi_A	115	Teashirt homolog 3; zinc finger protein 537, struc	98.63
2j7j_A	85	Transcription factor IIIA; zinc finger module, alt	98.61
1bbo_A	57	Human enhancer-binding protein MBP-1; DNA-binding	98.59
2j7j_A	85	Transcription factor IIIA; zinc finger module, alt	98.59
2dlk_A	79	Novel protein; ZF-C2H2 domain, zinc finger protein	98.58
2lv2_A	85	Insulinoma-associated protein 1; structural genomi	98.53
2lce_A	74	B-cell lymphoma 6 protein; structural genomics, no	98.52
2adr_A	60	ADR1; transcription regulation, zinc finger,; NMR	98.51
1x6e_A	72	Zinc finger protein 24; ZNF24, KOX17, ZNF191, zsca	98.49
2lv2_A	85	Insulinoma-associated protein 1; structural genomi	98.49
1x5w_A	70	Zinc finger protein 64, isoforms 1; ZNF338, nuclea	98.48
3uk3_C	57	Zinc finger protein 217; transcription factor, DNA	98.47
2adr_A	60	ADR1; transcription regulation, zinc finger,; NMR	98.46
2cot_A	77	Zinc finger protein 435; ADK_LID domain, zinc fing	98.41
1x6h_A	86	Transcriptional repressor CTCF; zinc finger protei	98.41
2drp_A	66	Protein (tramtrack DNA-binding domain); protein-DN	98.39
1x5w_A	70	Zinc finger protein 64, isoforms 1; ZNF338, nuclea	98.39
2lce_A	74	B-cell lymphoma 6 protein; structural genomics, no	98.38
1x6e_A	72	Zinc finger protein 24; ZNF24, KOX17, ZNF191, zsca	98.37
2wbt_A	129	B-129; zinc finger; 2.70A {Sulfolobus virus 1}	98.36
2drp_A	66	Protein (tramtrack DNA-binding domain); protein-DN	98.36
2d9h_A	78	Zinc finger protein 692; ZF-C2H2 domain, structura	98.34
2gqj_A	98	Zinc finger protein KIAA1196; ZF-C2H2 like domain,	98.33
2ct1_A	77	Transcriptional repressor CTCF; CCCTC-BINDING fact	98.31
2cot_A	77	Zinc finger protein 435; ADK_LID domain, zinc fing	98.31
2ctd_A	96	Zinc finger protein 512; zinc binding, two ZF-C2H2	98.31
2d9h_A	78	Zinc finger protein 692; ZF-C2H2 domain, structura	98.28
1llm_C	88	Chimera of ZIF23-GCN4; dimerization, DNA recogniti	98.28
2ct1_A	77	Transcriptional repressor CTCF; CCCTC-BINDING fact	98.26
1f2i_G	73	Fusion of N-terminal 17-MER peptide extension to Z	98.23
1x6h_A	86	Transcriptional repressor CTCF; zinc finger protei	98.22
2gqj_A	98	Zinc finger protein KIAA1196; ZF-C2H2 like domain,	98.2
2ctd_A	96	Zinc finger protein 512; zinc binding, two ZF-C2H2	98.18
2epa_A	72	Krueppel-like factor 10; transforming growth facto	98.09
1f2i_G	73	Fusion of N-terminal 17-MER peptide extension to Z	98.09
2eod_A	66	TNF receptor-associated factor 4; zinc binding, NF	98.05
2eod_A	66	TNF receptor-associated factor 4; zinc binding, NF	97.98
2ghf_A	102	ZHX1, zinc fingers and homeoboxes protein 1; C2H2	97.94
2wbt_A	129	B-129; zinc finger; 2.70A {Sulfolobus virus 1}	97.94
2ghf_A	102	ZHX1, zinc fingers and homeoboxes protein 1; C2H2	97.94
2epa_A	72	Krueppel-like factor 10; transforming growth facto	97.9
2ej4_A	95	Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc bi	97.87
2eps_A	54	POZ-, at HOOK-, and zinc finger-containing protein	97.87
2dlk_A	79	Novel protein; ZF-C2H2 domain, zinc finger protein	97.85
2ej4_A	95	Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc bi	97.8
2eps_A	54	POZ-, at HOOK-, and zinc finger-containing protein	97.73
1wir_A	121	Protein arginine N-methyltransferase 3; C2H2 zinc	97.63
2epr_A	48	POZ-, at HOOK-, and zinc finger-containing protein	97.59
2ctu_A	73	Zinc finger protein 483; zinc finger domain, struc	97.55
2ytn_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	97.52
2epr_A	48	POZ-, at HOOK-, and zinc finger-containing protein	97.51
2eq4_A	46	Zinc finger protein 224; C2H2, zinc finger domain,	97.46
2eov_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	97.46
2epq_A	45	POZ-, at HOOK-, and zinc finger-containing protein	97.46
2ytt_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	97.45
2eop_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	97.45
2ytr_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	97.44
2elz_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	97.44
2emk_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	97.43
2em0_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	97.43
2eoq_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	97.43
2ytq_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	97.43
1zr9_A	124	Zinc finger protein 593; DNA binding, structural g	97.42
2epz_A	46	Zinc finger protein 28 homolog; C2H2, zinc finger	97.41
2ytm_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	97.41
2ely_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	97.38
2eoe_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	97.37
2em7_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	97.36
2ytg_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	97.36
2emp_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	97.36
2eml_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	97.35
2emx_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	97.34
2emh_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	97.33
2eoo_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	97.33
2emf_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	97.32
2el4_A	46	Zinc finger protein 268; alternative splicing, DNA	97.32
2ytd_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	97.32
2emy_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	97.32
2em9_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	97.32
2eme_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	97.31
2eq0_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	97.31
2yu8_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	97.31
2yso_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	97.3
2emm_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	97.3
2ep0_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	97.3
2em5_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	97.3
2epw_A	46	Zinc finger protein 268; C2H2, zinc finger domain,	97.29
2ene_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	97.28
2en8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	97.28
2enc_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	97.26
2em8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	97.25
2el6_A	46	Zinc finger protein 268; alternative splicing, DNA	97.25
2ema_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	97.24
2en6_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	97.24
2ytn_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	97.23
2ep2_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	97.22
2ytj_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	97.21
2ytk_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	97.21
2ep3_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	97.19
2en1_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	97.19
2epx_A	47	Zinc finger protein 28 homolog; C2H2, zinc finger	97.18
2em0_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	97.18
2ysp_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	97.18
1yui_A	54	GAGA-factor; complex (DNA-binding protein/DNA), ch	97.18
2eq4_A	46	Zinc finger protein 224; C2H2, zinc finger domain,	97.17
2eop_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	97.17
2eoe_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	97.16
2el4_A	46	Zinc finger protein 268; alternative splicing, DNA	97.16
2epq_A	45	POZ-, at HOOK-, and zinc finger-containing protein	97.16
2epz_A	46	Zinc finger protein 28 homolog; C2H2, zinc finger	97.15
2em7_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	97.15
2elz_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	97.15
2ytq_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	97.14
2emf_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	97.14
2eq0_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	97.13
2eoq_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	97.11
2emk_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	97.11
2eov_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	97.1
2ely_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	97.1
2eml_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	97.09
2ep2_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	97.09
2ytr_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	97.09
2ytg_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	97.08
2em5_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	97.08
1znf_A	27	31ST zinc finger from XFIN; zinc finger DNA bindin	97.08
2ytj_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	97.08
2ene_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	97.08
2ytk_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	97.07
2ema_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	97.07
2emy_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	97.07
2em9_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	97.06
2ytm_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	97.06
2emx_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	97.05
2eme_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	97.05
2ysp_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	97.04
2el6_A	46	Zinc finger protein 268; alternative splicing, DNA	97.04
2ytd_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	97.03
2enc_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	97.03
2en8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	97.03
2emm_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	97.03
2en6_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	97.02
2epw_A	46	Zinc finger protein 268; C2H2, zinc finger domain,	97.02
2ep0_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	97.02
2em2_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	97.01
2emh_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	97.01
2epx_A	47	Zinc finger protein 28 homolog; C2H2, zinc finger	97.01
2emp_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	97.0
2en1_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	96.99
2yso_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	96.97
2ep3_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	96.95
2eoo_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	96.95
2em8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	96.92
2yu8_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	96.91
1klr_A	30	Zinc finger Y-chromosomal protein; transcription;	96.91
2ytt_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	96.89
2m0e_A	29	Zinc finger and BTB domain-containing protein 17;	96.89
2eon_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	96.89
2enf_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	96.89
2yti_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	96.87
1ard_A	29	Yeast transcription factor ADR1; transcription reg	96.86
2kvf_A	28	Zinc finger and BTB domain-containing protein 32;	96.84
2emg_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	96.84
2eoh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	96.83
1rim_A	33	E6APC2 peptide; E6-binding domain, zinc finger, hu	96.83
2ytb_A	42	Zinc finger protein 32; zinc-finger domain, C2H2,	96.82
2em2_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	96.82
2en9_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	96.81
2ep1_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	96.79
2eos_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	96.78
2yrm_A	43	B-cell lymphoma 6 protein; ZF-C2H2, zinc binding,	96.76
1p7a_A	37	BF3, BKLF, kruppel-like factor 3; classical zinc f	96.76
2yte_A	42	Zinc finger protein 473; ZF-C2H2, structural genom	96.75
2en7_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	96.75
2eq2_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	96.75
2em6_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	96.74
2eom_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	96.73
2enh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	96.73
2eou_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	96.72
1yui_A	54	GAGA-factor; complex (DNA-binding protein/DNA), ch	96.72
2eq1_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	96.72
2yth_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	96.7
2ept_A	41	Zinc finger protein 32; C2H2, zinc finger domain,	96.7
2m0d_A	30	Zinc finger and BTB domain-containing protein 17;	96.7
2elx_A	35	Zinc finger protein 406; ZFAT zinc finger 1, struc	96.69
1rik_A	29	E6APC1 peptide; E6-binding domain, zinc finger, hu	96.67
2el5_A	42	Zinc finger protein 268; alternative splicing, DNA	96.67
2eow_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	96.67
2emz_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	96.66
1srk_A	35	Zinc finger protein ZFPM1; classical zinc finger,	96.66
2eor_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	96.65
2ytf_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	96.64
2lvt_A	29	Zinc finger and BTB domain-containing protein 17;	95.66
2em4_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	96.63
2kvh_A	27	Zinc finger and BTB domain-containing protein 32;	96.63
2ent_A	48	Krueppel-like factor 15; zinc binding, transcripti	96.61
2epc_A	42	Zinc finger protein 32; zinc finger domain, C2H2,	96.6
2m0f_A	29	Zinc finger and BTB domain-containing protein 17;	96.59
2eof_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	96.59
2emi_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	96.59
2lvr_A	30	Zinc finger and BTB domain-containing protein 17;	95.59
2en2_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	96.56
2em3_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	96.56
2yts_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	96.56
2elt_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	96.56
2ytp_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	96.55
2emj_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	96.55
2elr_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	96.53
1p7a_A	37	BF3, BKLF, kruppel-like factor 3; classical zinc f	96.53
2elq_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	96.53
2elx_A	35	Zinc finger protein 406; ZFAT zinc finger 1, struc	96.52
2yrj_A	46	Zinc finger protein 473; C2H2-type zinc finger, st	96.52
2elo_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	96.51
2elr_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	96.51
2yto_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	96.5
2eoj_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	96.48
2elo_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	96.47
2elv_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	96.47
1fv5_A	36	First zinc finger of U-shaped; CCHC, protein inter	96.46
2kvg_A	27	Zinc finger and BTB domain-containing protein 32;	96.46
2kvh_A	27	Zinc finger and BTB domain-containing protein 32;	96.46
2emb_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	96.45
2eos_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	96.45
2kvf_A	28	Zinc finger and BTB domain-containing protein 32;	96.45
1vd4_A	62	Transcription initiation factor IIE, alpha subunit	96.45
1njq_A	39	Superman protein; zinc-finger, peptide-zinc comple	96.45
2epu_A	45	Zinc finger protein 32; C2H2, zinc finger domain,	96.45
2yte_A	42	Zinc finger protein 473; ZF-C2H2, structural genom	96.44
2elt_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	96.44
1srk_A	35	Zinc finger protein ZFPM1; classical zinc finger,	96.43
2eoz_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	96.41
1znf_A	27	31ST zinc finger from XFIN; zinc finger DNA bindin	96.4
1sp2_A	31	SP1F2; zinc finger, transcription activation; NMR	96.4
2eq3_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	96.39
2elm_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	96.38
2yu5_A	44	Zinc finger protein 473; ZF-C2H2 domain, structura	96.38
2lvu_A	26	Zinc finger and BTB domain-containing protein 17;	95.38
2emg_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	96.36
2epp_A	66	POZ-, at HOOK-, and zinc finger-containing protein	96.36
2eon_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	96.36
2epv_A	44	Zinc finger protein 268; C2H2, zinc finger domain,	96.35
2eq2_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	96.35
2emi_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	96.35
2en9_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	96.34
2en3_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	96.34
2els_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	96.34
2eln_A	38	Zinc finger protein 406; ZFAT zinc finger 1, struc	96.33
3iuf_A	48	Zinc finger protein UBI-D4; structural genomics co	96.33
2en7_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	96.33
2els_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	96.32
2emj_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	96.31
2elv_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	96.31
2elp_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	96.31
2ent_A	48	Krueppel-like factor 15; zinc binding, transcripti	96.31
2epc_A	42	Zinc finger protein 32; zinc finger domain, C2H2,	96.3
2eoh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	96.3
2en2_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	96.3
2el5_A	42	Zinc finger protein 268; alternative splicing, DNA	96.29
2ytp_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	96.29
2ept_A	41	Zinc finger protein 32; C2H2, zinc finger domain,	96.28
2enh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	96.28
2ep1_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	96.28
2yti_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	96.28
2ytb_A	42	Zinc finger protein 32; zinc-finger domain, C2H2,	96.27
2enf_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	96.27
2eq1_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	96.27
2em3_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	96.26
2eox_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	96.26
2eof_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	96.25
2em4_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	96.25
2elq_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	96.24
2kfq_A	32	FP1; protein, de novo protein; NMR {Synthetic}	96.23
2eor_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	96.23
2yu5_A	44	Zinc finger protein 473; ZF-C2H2 domain, structura	96.23
2yts_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	96.22
2yth_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	96.21
2kvg_A	27	Zinc finger and BTB domain-containing protein 32;	96.21
2eoy_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	96.2
2eoz_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	96.18
2emz_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	96.18
2eln_A	38	Zinc finger protein 406; ZFAT zinc finger 1, struc	96.18
2em6_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	96.18
2en3_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	96.18
2yrj_A	46	Zinc finger protein 473; C2H2-type zinc finger, st	96.17
2elp_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	96.17
1paa_A	30	Yeast transcription factor ADR1; transcription reg	96.17
1zu1_A	127	DSRBP-ZFA, RNA binding protein ZFA; zinc finger pr	96.17
2lvu_A	26	Zinc finger and BTB domain-containing protein 17;	95.16
1ard_A	29	Yeast transcription factor ADR1; transcription reg	96.16
2eou_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	96.16
2m0d_A	30	Zinc finger and BTB domain-containing protein 17;	96.15
2ytf_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	96.14
1rim_A	33	E6APC2 peptide; E6-binding domain, zinc finger, hu	96.13
2eom_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	96.13
2yto_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	96.12
2eow_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	96.11
2emb_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	96.11
1njq_A	39	Superman protein; zinc-finger, peptide-zinc comple	96.1
2yrm_A	43	B-cell lymphoma 6 protein; ZF-C2H2, zinc binding,	96.1
1zfd_A	32	SWI5; DNA binding motif, zinc finger DNA binding d	96.09
2epv_A	44	Zinc finger protein 268; C2H2, zinc finger domain,	96.08
2eoj_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	96.08
2epu_A	45	Zinc finger protein 32; C2H2, zinc finger domain,	95.99
1rik_A	29	E6APC1 peptide; E6-binding domain, zinc finger, hu	95.98
2eq3_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	95.97
2eox_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	95.95
2m0e_A	29	Zinc finger and BTB domain-containing protein 17;	95.85
2m0f_A	29	Zinc finger and BTB domain-containing protein 17;	95.8
1klr_A	30	Zinc finger Y-chromosomal protein; transcription;	95.79
2ab3_A	29	ZNF29; zinc finger protein, beta BETA alpha, RREII	95.78
2eoy_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	95.77
1va1_A	37	Transcription factor SP1; C2H2 type zinc finger, D	95.74
2lvt_A	29	Zinc finger and BTB domain-containing protein 17;	94.55
1paa_A	30	Yeast transcription factor ADR1; transcription reg	95.49
1zfd_A	32	SWI5; DNA binding motif, zinc finger DNA binding d	95.48
3iuf_A	48	Zinc finger protein UBI-D4; structural genomics co	95.47
1va1_A	37	Transcription factor SP1; C2H2 type zinc finger, D	95.45
2epp_A	66	POZ-, at HOOK-, and zinc finger-containing protein	95.43
2lvr_A	30	Zinc finger and BTB domain-containing protein 17;	94.41
1zw8_A	64	Zinc-responsive transcriptional regulator ZAP1; in	95.31
2d9k_A	75	FLN29 gene product; zinc finger, ZF-TRAF, structur	95.29
2elm_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	95.28
1sp2_A	31	SP1F2; zinc finger, transcription activation; NMR	95.22
1bhi_A	38	CRE-BP1, ATF-2; CRE binding protein, transcription	95.2
2kfq_A	32	FP1; protein, de novo protein; NMR {Synthetic}	95.19
1bhi_A	38	CRE-BP1, ATF-2; CRE binding protein, transcription	95.11
2ctu_A	73	Zinc finger protein 483; zinc finger domain, struc	95.07
1vd4_A	62	Transcription initiation factor IIE, alpha subunit	95.07
1x3c_A	73	Zinc finger protein 292; DNA binding, nuclear prot	94.84
2ab3_A	29	ZNF29; zinc finger protein, beta BETA alpha, RREII	94.52
2d9k_A	75	FLN29 gene product; zinc finger, ZF-TRAF, structur	94.41
1x6f_A	88	Zinc finger protein 462; zinc finger domain, KIAA1	94.23
1fv5_A	36	First zinc finger of U-shaped; CCHC, protein inter	94.2
1ncs_A	47	Peptide M30F, transcriptional factor SWI5; DNA bin	93.92
1ncs_A	47	Peptide M30F, transcriptional factor SWI5; DNA bin	93.56
1x3c_A	73	Zinc finger protein 292; DNA binding, nuclear prot	93.13
1x6f_A	88	Zinc finger protein 462; zinc finger domain, KIAA1	92.34
2e72_A	49	POGO transposable element with ZNF domain; zinc fi	92.27
1zr9_A	124	Zinc finger protein 593; DNA binding, structural g	92.09
3mjh_B	34	Early endosome antigen 1; protein-zinc finger comp	90.75
2e72_A	49	POGO transposable element with ZNF domain; zinc fi	90.62
2yrk_A	55	Zinc finger homeobox protein 4; structure genomics	90.5
1zw8_A	64	Zinc-responsive transcriptional regulator ZAP1; in	90.49
1wir_A	121	Protein arginine N-methyltransferase 3; C2H2 zinc	87.27
3mjh_B	34	Early endosome antigen 1; protein-zinc finger comp	87.19
1fu9_A	36	U-shaped transcriptional cofactor; zinc-finger, be	86.78
2elu_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	84.06

>2dlq_A GLI-kruppel family member HKR3; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.53  E-value=1.8e-14  Score=120.10  Aligned_cols=112  Identities=21%  Similarity=0.446  Sum_probs=94.0

Q ss_pred             CCCcccccccccCChHHHhhhhhhccccchhhhhhcCCCCCCHHHHHHHHHHHHHhhhcCCCCCcccccCcCCccCChHH
Q 015261            2 PGLTCNSCNREFNDDAEQKLHYKSDWHRYNLKRKVAGVPGVTEALFLARQAALAQEKNKNATPMTYSCGLCGKGYRSSKA   81 (410)
Q Consensus         2 ~~ftC~~C~~~F~~~~~qr~H~ksdwHrYNlKRrva~Lppvs~~~F~~k~~~l~~~~~~~~~~~~~~C~~C~K~f~s~~~   81 (410)
                      .+|.|..|+..|.+...|+.|+++  |                                 .++.+|.|.+|++.|.+...
T Consensus         6 ~~~~C~~C~~~f~~~~~l~~H~~~--h---------------------------------~~~~~~~C~~C~~~f~~~~~   50 (124)
T 2dlq_A            6 SGVECPTCHKKFLSKYYLKVHNRK--H---------------------------------TGEKPFECPKCGKCYFRKEN   50 (124)
T ss_dssp             SSCCCTTTCCCCSSHHHHHHHHHH--H---------------------------------SSCCSCBCTTTCCBCSSHHH
T ss_pred             CCCCCCCCCCcCCCHHHHHHHHHh--C---------------------------------CCCCCeECCCCCchhcCHHH
Confidence            479999999999999999999997  3                                 12357999999999999999


Q ss_pred             HHHHHhhhhhhhhhccCCCchhhhhhhccCCCCCCCCCCCCccccCCCCCCCCcccccccCcchhhhhhhcccccccCCC
Q 015261           82 LAQHLNSRSHIMRASQGTSNEEKEKVIIKPIPLRDVNKPPRKREANNEESEDSDDEWEEVGPDEVLVSEATNSLTNLNVG  161 (410)
Q Consensus        82 l~~Hl~skkHk~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~ee~~~~e~~~~~~~~~~~~~~~~  161 (410)
                      |..|++.... .                                         .                          
T Consensus        51 l~~H~~~~~~-~-----------------------------------------~--------------------------   62 (124)
T 2dlq_A           51 LLEHEARNCM-N-----------------------------------------R--------------------------   62 (124)
T ss_dssp             HHHHHHHCCC-C-----------------------------------------S--------------------------
T ss_pred             HHHHHhhhhc-C-----------------------------------------C--------------------------
Confidence            9999864210 0                                         0                          


Q ss_pred             CCCCCCCccCCCCCCCCCCCCcccCCCCCCCCChhHHhhhhhhhhcCCCCCcccccChHHHHHHHHhHhcCCccccccCC
Q 015261          162 SPADDDLEEDDDDGAFEEFDPACCFMCDLPHDAIENCMVHMHKCHGFFIPDVEYLKDPKGLLTYLGLKVKRDFMCLYCND  241 (410)
Q Consensus       162 ~~~~~~~~~~~~~~~~~~i~p~~ClfC~~~f~~~~~~~~HM~~~Hgf~ip~~~~lvd~~gLl~yl~~ki~~~~~Cl~C~~  241 (410)
                                       ...++.|.+|++.|.+...|..||..|++                       ..++.|..|+ 
T Consensus        63 -----------------~~~~~~C~~C~~~f~~~~~l~~H~~~h~~-----------------------~~~~~C~~C~-  101 (124)
T 2dlq_A           63 -----------------SEQVFTCSVCQETFRRRMELRLHMVSHTG-----------------------EMPYKCSSCS-  101 (124)
T ss_dssp             -----------------CCCCEECSSSCCEESSHHHHHHHHHHHSS-----------------------SCSEECSSSC-
T ss_pred             -----------------CCCCeECCCCCCccCCHHHHHHHHHHcCC-----------------------CCCccCCCcc-
Confidence                             01467899999999999999999999877                       2479999999 


Q ss_pred             CCcccCCHHHHHHHHHhc
Q 015261          242 RCHPFNSLEAVRKHMEAK  259 (410)
Q Consensus       242 ~gk~F~s~~alr~HM~~k  259 (410)
                        +.|.+...|+.||+..
T Consensus       102 --~~f~~~~~l~~H~~~~  117 (124)
T 2dlq_A          102 --QQFMQKKDLQSHMIKL  117 (124)
T ss_dssp             --CEESSHHHHHHHHHHT
T ss_pred             --chhCCHHHHHHHHHHH
Confidence              9999999999999853

>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C*

Probab=99.49  E-value=1.6e-14  Score=130.16  Aligned_cols=76  Identities=16%  Similarity=0.275  Sum_probs=51.2

Q ss_pred             CCcccCCCCCCCCChhHHhhhhhhhhcCCC--CC-c-ccccChHHHHHHHHhHhc-CCccccccCCCCcccCCHHHHHHH
Q 015261          181 DPACCFMCDLPHDAIENCMVHMHKCHGFFI--PD-V-EYLKDPKGLLTYLGLKVK-RDFMCLYCNDRCHPFNSLEAVRKH  255 (410)
Q Consensus       181 ~p~~ClfC~~~f~~~~~~~~HM~~~Hgf~i--p~-~-~~lvd~~gLl~yl~~ki~-~~~~Cl~C~~~gk~F~s~~alr~H  255 (410)
                      .++.|.+|++.|.+...|..||.+|+|...  +. . ..+.....|..|+..+.+ .++.|..|+   +.|.+...|+.|
T Consensus       104 ~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~~~~~C~~C~---~~f~~~~~L~~H  180 (190)
T 2i13_A          104 KPYACPECGKSFSQLAHLRAHQRTHTGEKPYKCPECGKSFSREDNLHTHQRTHTGEKPYKCPECG---KSFSRRDALNVH  180 (190)
T ss_dssp             CCEECTTTCCEESSHHHHHHHHHHHHCCCCEECTTTCCEESCHHHHHHHHHHHHCCCCEECTTTC---CEESSHHHHHHH
T ss_pred             CCCcCCCCCCccCCHHHHHHHHHHhCCCCCeECCCCCcccCCHHHHHHHHHhcCCCCCeECCCCC---CccCCHHHHHHH
Confidence            355666777777766667777766665211  11 1 223456666666655544 479999999   999999999999


Q ss_pred             HHhc
Q 015261          256 MEAK  259 (410)
Q Consensus       256 M~~k  259 (410)
                      |+..
T Consensus       181 ~~~H  184 (190)
T 2i13_A          181 QRTH  184 (190)
T ss_dssp             HTTC
T ss_pred             HHhc
Confidence            9853

>2jp9_A Wilms tumor 1; DNA binding, nucleic acid recognition, X-RAY; HET: DNA; NMR {Homo sapiens} PDB: 2jpa_A* 2prt_A*

Probab=99.38  E-value=7e-13  Score=109.80  Aligned_cols=108  Identities=20%  Similarity=0.493  Sum_probs=92.2

Q ss_pred             CCCcccc--cccccCChHHHhhhhhhccccchhhhhhcCCCCCCHHHHHHHHHHHHHhhhcCCCCCccccc--CcCCccC
Q 015261            2 PGLTCNS--CNREFNDDAEQKLHYKSDWHRYNLKRKVAGVPGVTEALFLARQAALAQEKNKNATPMTYSCG--LCGKGYR   77 (410)
Q Consensus         2 ~~ftC~~--C~~~F~~~~~qr~H~ksdwHrYNlKRrva~Lppvs~~~F~~k~~~l~~~~~~~~~~~~~~C~--~C~K~f~   77 (410)
                      .+|.|..  |+..|.+...|+.|+++  |.                                 +..+|.|.  .|++.|.
T Consensus         5 ~~~~C~~~~C~~~f~~~~~l~~H~~~--h~---------------------------------~~~~~~C~~~~C~~~f~   49 (119)
T 2jp9_A            5 RPFMCAYPGCNKRYFKLSHLQMHSRK--HT---------------------------------GEKPYQCDFKDCERRFS   49 (119)
T ss_dssp             CCBCCCSTTSCCCBSCHHHHHHHHHH--HH---------------------------------TTCCEECCSTTCCCEES
T ss_pred             eeeeCCCCCCcchhCCHHHHHHHHHh--hC---------------------------------CCCCccCCCCCCcCccC
Confidence            4799997  99999999999999997  41                                 23579999  7999999


Q ss_pred             ChHHHHHHHhhhhhhhhhccCCCchhhhhhhccCCCCCCCCCCCCccccCCCCCCCCcccccccCcchhhhhhhcccccc
Q 015261           78 SSKALAQHLNSRSHIMRASQGTSNEEKEKVIIKPIPLRDVNKPPRKREANNEESEDSDDEWEEVGPDEVLVSEATNSLTN  157 (410)
Q Consensus        78 s~~~l~~Hl~skkHk~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~ee~~~~e~~~~~~~~~~~~  157 (410)
                      +...|..|++.  |..                                                                
T Consensus        50 ~~~~l~~H~~~--h~~----------------------------------------------------------------   63 (119)
T 2jp9_A           50 RSDQLKRHQRR--HTG----------------------------------------------------------------   63 (119)
T ss_dssp             SHHHHHHHHHH--HHC----------------------------------------------------------------
T ss_pred             CHHHHHHHHHH--cCC----------------------------------------------------------------
Confidence            99999999864  210                                                                


Q ss_pred             cCCCCCCCCCCccCCCCCCCCCCCCcccCCCCCCCCChhHHhhhhhhhhcCCCCCcccccChHHHHHHHHhHhcCCccc-
Q 015261          158 LNVGSPADDDLEEDDDDGAFEEFDPACCFMCDLPHDAIENCMVHMHKCHGFFIPDVEYLKDPKGLLTYLGLKVKRDFMC-  236 (410)
Q Consensus       158 ~~~~~~~~~~~~~~~~~~~~~~i~p~~ClfC~~~f~~~~~~~~HM~~~Hgf~ip~~~~lvd~~gLl~yl~~ki~~~~~C-  236 (410)
                                            ..++.|..|++.|.+...|..||.+|+|                       ..++.| 
T Consensus        64 ----------------------~~~~~C~~C~~~f~~~~~l~~H~~~h~~-----------------------~~~~~C~   98 (119)
T 2jp9_A           64 ----------------------VKPFQCKTCQRKFSRSDHLKTHTRTHTG-----------------------EKPFSCR   98 (119)
T ss_dssp             ----------------------CCCEECTTTCCEESCHHHHHHHHHHHHT-----------------------CCCEECC
T ss_pred             ----------------------CCCccCCccCchhCCHHHHHHHHHHhcC-----------------------CCCeeCC
Confidence                                  0357899999999999999999999877                       247899 


Q ss_pred             -cccCCCCcccCCHHHHHHHHHh
Q 015261          237 -LYCNDRCHPFNSLEAVRKHMEA  258 (410)
Q Consensus       237 -l~C~~~gk~F~s~~alr~HM~~  258 (410)
                       ..|+   +.|.+...|+.||+.
T Consensus        99 ~~~C~---~~f~~~~~L~~H~~~  118 (119)
T 2jp9_A           99 WPSCQ---KKFARSDELVRHHNM  118 (119)
T ss_dssp             STTCC---CEESSHHHHHHHHHT
T ss_pred             CCCCc---cccCCHHHHHHHHhc
Confidence             7899   999999999999985

>1tf6_A Protein (transcription factor IIIA); complex (transcription regulation/DNA), RNA polymerase III, transcription initiation, zinc finger protein; HET: DNA; 3.10A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1tf3_A

Probab=99.34  E-value=2.2e-12  Score=116.07  Aligned_cols=74  Identities=14%  Similarity=0.129  Sum_probs=51.2

Q ss_pred             CCccc--CCCCCCCCChhHHhhhhhhhhcC--CCCC---c-ccccChHHHHHHHHhHhcCCccccc---cCCCCcccCCH
Q 015261          181 DPACC--FMCDLPHDAIENCMVHMHKCHGF--FIPD---V-EYLKDPKGLLTYLGLKVKRDFMCLY---CNDRCHPFNSL  249 (410)
Q Consensus       181 ~p~~C--lfC~~~f~~~~~~~~HM~~~Hgf--~ip~---~-~~lvd~~gLl~yl~~ki~~~~~Cl~---C~~~gk~F~s~  249 (410)
                      .++.|  ..|++.|.+...|..||.+|+|.  |.+.   . ..+.....|..|+..+  .++.|..   |+   +.|.+.
T Consensus       103 ~~~~C~~~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~~~C~k~F~~~~~L~~H~~~H--~~~~C~~~~~C~---~~f~~~  177 (190)
T 1tf6_A          103 CVYVCHFENCGKAFKKHNQLKVHQFSHTQQLPYECPHEGCDKRFSLPSRLKRHEKVH--AGYPCKKDDSCS---FVGKTW  177 (190)
T ss_dssp             SCCEECSSSSCEECSSHHHHHHHHGGGSSSCSSBCCSSSCCCBCSSHHHHHHHHTSS--CSCCCCSTTTCC---CCCSCH
T ss_pred             ceeeCCCCCCccccCCHHHHHHHHHHhCCCCCccCCCCCCCchhcCHHHHHHHHHHh--CCCcCCCCCcCC---CccccH
Confidence            45778  66888888888888888877663  2221   2 2345667777776433  3478888   88   889999


Q ss_pred             HHHHHHHHhc
Q 015261          250 EAVRKHMEAK  259 (410)
Q Consensus       250 ~alr~HM~~k  259 (410)
                      ..|+.||+..
T Consensus       178 ~~l~~H~~~h  187 (190)
T 1tf6_A          178 TLYLKHVAEC  187 (190)
T ss_dssp             HHHHHHHTTC
T ss_pred             HHHHHHHHhh
Confidence            9999998753

>1ubd_C Protein (YY1 zinc finger domain); transcription initiation, initiator element, zinc finger protein, DNA- protein recognition; HET: DNA; 2.50A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1znm_A*

Probab=99.33  E-value=1.3e-12  Score=109.22  Aligned_cols=108  Identities=25%  Similarity=0.551  Sum_probs=91.0

Q ss_pred             CCCccc--ccccccCChHHHhhhhhhccccchhhhhhcCCCCCCHHHHHHHHHHHHHhhhcCCCCCcccccCcCCccCCh
Q 015261            2 PGLTCN--SCNREFNDDAEQKLHYKSDWHRYNLKRKVAGVPGVTEALFLARQAALAQEKNKNATPMTYSCGLCGKGYRSS   79 (410)
Q Consensus         2 ~~ftC~--~C~~~F~~~~~qr~H~ksdwHrYNlKRrva~Lppvs~~~F~~k~~~l~~~~~~~~~~~~~~C~~C~K~f~s~   79 (410)
                      .+|.|.  .|+..|.+...|+.|+++  |                                  +..+|.|.+|++.|.+.
T Consensus         4 ~~~~C~~~~C~~~f~~~~~l~~H~~~--h----------------------------------~~~~~~C~~C~~~f~~~   47 (124)
T 1ubd_C            4 RTIACPHKGCTKMFRDNSAMRKHLHT--H----------------------------------GPRVHVCAECGKAFVES   47 (124)
T ss_dssp             -CEECCSTTCCCEESSHHHHHHHHGG--G----------------------------------SCCCEECTTTCCEESSH
T ss_pred             CcccCCCCCCcCccCCHHHHHHHHHH--c----------------------------------CCCCeECCCCCchhCCH
Confidence            368999  899999999999999987  4                                  12478999999999999


Q ss_pred             HHHHHHHhhhhhhhhhccCCCchhhhhhhccCCCCCCCCCCCCccccCCCCCCCCcccccccCcchhhhhhhcccccccC
Q 015261           80 KALAQHLNSRSHIMRASQGTSNEEKEKVIIKPIPLRDVNKPPRKREANNEESEDSDDEWEEVGPDEVLVSEATNSLTNLN  159 (410)
Q Consensus        80 ~~l~~Hl~skkHk~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~ee~~~~e~~~~~~~~~~~~~~  159 (410)
                      ..|..|++.  |..                                                                  
T Consensus        48 ~~l~~H~~~--h~~------------------------------------------------------------------   59 (124)
T 1ubd_C           48 SKLKRHQLV--HTG------------------------------------------------------------------   59 (124)
T ss_dssp             HHHHHHGGG--TSC------------------------------------------------------------------
T ss_pred             HHHHHHHHH--cCC------------------------------------------------------------------
Confidence            999999852  100                                                                  


Q ss_pred             CCCCCCCCCccCCCCCCCCCCCCcccCC--CCCCCCChhHHhhhhhhhhcCCCCCcccccChHHHHHHHHhHhcCCcccc
Q 015261          160 VGSPADDDLEEDDDDGAFEEFDPACCFM--CDLPHDAIENCMVHMHKCHGFFIPDVEYLKDPKGLLTYLGLKVKRDFMCL  237 (410)
Q Consensus       160 ~~~~~~~~~~~~~~~~~~~~i~p~~Clf--C~~~f~~~~~~~~HM~~~Hgf~ip~~~~lvd~~gLl~yl~~ki~~~~~Cl  237 (410)
                                          ..++.|.+  |++.|.+...|..||..|+|                       ..++.|.
T Consensus        60 --------------------~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~-----------------------~~~~~C~   96 (124)
T 1ubd_C           60 --------------------EKPFQCTFEGCGKRFSLDFNLRTHVRIHTG-----------------------DRPYVCP   96 (124)
T ss_dssp             --------------------CCCEECCSTTCCCEESCHHHHHHHHHHHHC-----------------------CCCCCCC
T ss_pred             --------------------CCCeeCCCCCCcCccCCHHHHHHHHHHhCC-----------------------CCceECC
Confidence                                13578987  99999999999999999887                       2478996


Q ss_pred             c--cCCCCcccCCHHHHHHHHHhc
Q 015261          238 Y--CNDRCHPFNSLEAVRKHMEAK  259 (410)
Q Consensus       238 ~--C~~~gk~F~s~~alr~HM~~k  259 (410)
                      +  |+   +.|.+...|+.||+..
T Consensus        97 ~~~C~---~~f~~~~~L~~H~~~H  117 (124)
T 1ubd_C           97 FDGCN---KKFAQSTNLKSHILTH  117 (124)
T ss_dssp             STTCC---CCCSSTTTTHHHHHHH
T ss_pred             CCCCC---CccCCHHHHHHHHHHH
Confidence            5  99   9999999999999974

>2gli_A Protein (five-finger GLI); protein/DNA complex, transcription/DNA complex; HET: DNA; 2.60A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.32  E-value=9.5e-13  Score=114.20  Aligned_cols=54  Identities=19%  Similarity=0.518  Sum_probs=41.5

Q ss_pred             CCcccCC--CCCCCCChhHHhhhhhhhhcCCCCCcccccChHHHHHHHHhHhcCCccccc--cCCCCcccCCHHHHHHHH
Q 015261          181 DPACCFM--CDLPHDAIENCMVHMHKCHGFFIPDVEYLKDPKGLLTYLGLKVKRDFMCLY--CNDRCHPFNSLEAVRKHM  256 (410)
Q Consensus       181 ~p~~Clf--C~~~f~~~~~~~~HM~~~Hgf~ip~~~~lvd~~gLl~yl~~ki~~~~~Cl~--C~~~gk~F~s~~alr~HM  256 (410)
                      .|+.|.+  |++.|.+...|..||...|..                      ..++.|..  |+   +.|.+...|+.||
T Consensus        96 ~~~~C~~~~C~~~f~~~~~L~~H~~~~H~~----------------------~~~~~C~~~~C~---~~f~~~~~L~~H~  150 (155)
T 2gli_A           96 KPYMCEHEGCSKAFSNASDRAKHQNRTHSN----------------------EKPYVCKLPGCT---KRYTDPSSLRKHV  150 (155)
T ss_dssp             CCEECCSTTCCCEESSSSTTHHHHHHTTCS----------------------CCCEECCSTTTC---CEESSHHHHHHHH
T ss_pred             CCeeCCCCCCCCccCCHHHHHHHHHHhcCC----------------------CCCeeCCCCCCc---cccCCHHHHHHHH
Confidence            4567777  888888777888887333431                      23789998  99   9999999999999


Q ss_pred             Hhc
Q 015261          257 EAK  259 (410)
Q Consensus       257 ~~k  259 (410)
                      +..
T Consensus       151 ~~h  153 (155)
T 2gli_A          151 KTV  153 (155)
T ss_dssp             HHS
T ss_pred             Hhh
Confidence            864

>2rpc_A Zinc finger protein ZIC 3; ZF-C2H2, zinc finger protein of the cerebellum 3, disease mutation, DNA-binding, metal-binding, nucleus, polymorphism; NMR {Homo sapiens}

Probab=99.28  E-value=4.8e-12  Score=110.03  Aligned_cols=116  Identities=26%  Similarity=0.448  Sum_probs=92.0

Q ss_pred             CCcccccccccCChHHHhhhhhhccccchhhhhhcCCCCCCHHHHHHHHHHHHHhhhcCCCCCcccccCcCCccCChHHH
Q 015261            3 GLTCNSCNREFNDDAEQKLHYKSDWHRYNLKRKVAGVPGVTEALFLARQAALAQEKNKNATPMTYSCGLCGKGYRSSKAL   82 (410)
Q Consensus         3 ~ftC~~C~~~F~~~~~qr~H~ksdwHrYNlKRrva~Lppvs~~~F~~k~~~l~~~~~~~~~~~~~~C~~C~K~f~s~~~l   82 (410)
                      .|.|..|+..|.+...|+.|+++. |.        +.+|..                 ......|.|.+|++.|.+...|
T Consensus        25 ~~~C~~C~~~f~~~~~L~~H~~~~-H~--------~~~~~~-----------------~~~~~~~~C~~C~~~f~~~~~l   78 (155)
T 2rpc_A           25 SRPKKSCDRTFSTMHELVTHVTME-HV--------GGPEQN-----------------NHVCYWEECPREGKSFKAKYKL   78 (155)
T ss_dssp             SSSCCCCCCCBSSHHHHHHHHHTT-TS--------CCTTCS-----------------SCCCCBTTCTTSSCCCSSHHHH
T ss_pred             ccccccCCcccCCHHHHHHHHHhh-cC--------CCcccC-----------------CccccccCCCCcccccCCHHHH
Confidence            589999999999999999999985 41        211100                 0112348899999999999999


Q ss_pred             HHHHhhhhhhhhhccCCCchhhhhhhccCCCCCCCCCCCCccccCCCCCCCCcccccccCcchhhhhhhcccccccCCCC
Q 015261           83 AQHLNSRSHIMRASQGTSNEEKEKVIIKPIPLRDVNKPPRKREANNEESEDSDDEWEEVGPDEVLVSEATNSLTNLNVGS  162 (410)
Q Consensus        83 ~~Hl~skkHk~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~ee~~~~e~~~~~~~~~~~~~~~~~  162 (410)
                      ..|++.  |..                                                                     
T Consensus        79 ~~H~~~--h~~---------------------------------------------------------------------   87 (155)
T 2rpc_A           79 VNHIRV--HTG---------------------------------------------------------------------   87 (155)
T ss_dssp             HHHTHH--HHC---------------------------------------------------------------------
T ss_pred             HHHHHh--cCC---------------------------------------------------------------------
Confidence            999863  210                                                                     


Q ss_pred             CCCCCCccCCCCCCCCCCCCcccCC--CCCCCCChhHHhhhhhhhhcCCCCCcccccChHHHHHHHHhHhcCCccccc--
Q 015261          163 PADDDLEEDDDDGAFEEFDPACCFM--CDLPHDAIENCMVHMHKCHGFFIPDVEYLKDPKGLLTYLGLKVKRDFMCLY--  238 (410)
Q Consensus       163 ~~~~~~~~~~~~~~~~~i~p~~Clf--C~~~f~~~~~~~~HM~~~Hgf~ip~~~~lvd~~gLl~yl~~ki~~~~~Cl~--  238 (410)
                                       ..++.|.+  |++.|.+...|..||.+|+|                       ..+|.|.+  
T Consensus        88 -----------------~~~~~C~~~~C~~~f~~~~~L~~H~~~h~~-----------------------~~~~~C~~~~  127 (155)
T 2rpc_A           88 -----------------EKPFPCPFPGCGKIFARSENLKIHKRTHTG-----------------------EKPFKCEFEG  127 (155)
T ss_dssp             -----------------CCSEECSCTTTCCEESCHHHHHHHHTTTCS-----------------------SCSBCCSSTT
T ss_pred             -----------------CCcccCCcCCCCCccCCHHHHHHHHHhhCC-----------------------CCCccCCCCC
Confidence                             03578998  99999999999999999877                       24799998  


Q ss_pred             cCCCCcccCCHHHHHHHHHh
Q 015261          239 CNDRCHPFNSLEAVRKHMEA  258 (410)
Q Consensus       239 C~~~gk~F~s~~alr~HM~~  258 (410)
                      |+   +.|.+...|+.||+.
T Consensus       128 C~---k~f~~~~~L~~H~~~  144 (155)
T 2rpc_A          128 CD---RRFANSSDRKKHMHV  144 (155)
T ss_dssp             CC---CCBSSHHHHHHSSTT
T ss_pred             CC---CccCCHHHHHHHHHH
Confidence            99   999999999999974

>2lt7_A Transcriptional regulator kaiso; zinc finger, double helix, metal binding protein-DNA complex; HET: DNA; NMR {Homo sapiens} PDB: 4f6m_A* 4f6n_A*

Probab=99.26  E-value=4.8e-12  Score=109.44  Aligned_cols=104  Identities=15%  Similarity=0.213  Sum_probs=84.4

Q ss_pred             CCcccccccccCChHHHhhhhhhccccchhhhhhcCCCCCCHHHHHHHHHHHHHhhhcCCCCCcccccCcCCccCChHHH
Q 015261            3 GLTCNSCNREFNDDAEQKLHYKSDWHRYNLKRKVAGVPGVTEALFLARQAALAQEKNKNATPMTYSCGLCGKGYRSSKAL   82 (410)
Q Consensus         3 ~ftC~~C~~~F~~~~~qr~H~ksdwHrYNlKRrva~Lppvs~~~F~~k~~~l~~~~~~~~~~~~~~C~~C~K~f~s~~~l   82 (410)
                      +|+|..|+..|.+...|+.|+++  |                                 .++++|.|.+|+|.|.+...|
T Consensus        22 ~y~C~~C~k~F~~~~~L~~H~~~--H---------------------------------~~~k~~~C~~C~k~F~~~~~L   66 (133)
T 2lt7_A           22 YYICIVCKRSYVCLTSLRRHFNI--H---------------------------------SWEKKYPCRYCEKVFPLAEYR   66 (133)
T ss_dssp             EEEETTTCCEESCHHHHHHHHHH--H---------------------------------HCCSCEECSSSSCEESSHHHH
T ss_pred             CeECCCCCCCcCCHHHHHHHHHH--c---------------------------------CCCCCeeCCccCeecccccch
Confidence            59999999999999999999998  5                                 135689999999999999999


Q ss_pred             HHHHhhhhhhhhhccCCCchhhhhhhccCCCCCCCCCCCCccccCCCCCCCCcccccccCcchhhhhhhcccccccCCCC
Q 015261           83 AQHLNSRSHIMRASQGTSNEEKEKVIIKPIPLRDVNKPPRKREANNEESEDSDDEWEEVGPDEVLVSEATNSLTNLNVGS  162 (410)
Q Consensus        83 ~~Hl~skkHk~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~ee~~~~e~~~~~~~~~~~~~~~~~  162 (410)
                      ..|++.  |..                                                                     
T Consensus        67 ~~H~~~--H~~---------------------------------------------------------------------   75 (133)
T 2lt7_A           67 TKHEIH--HTG---------------------------------------------------------------------   75 (133)
T ss_dssp             HHHHHH--HHT---------------------------------------------------------------------
T ss_pred             hhhccc--cCC---------------------------------------------------------------------
Confidence            999863  321                                                                     


Q ss_pred             CCCCCCccCCCCCCCCCCCCcccCCCCCCCCChhHHhhhhhhhhcCCCCCcccccChHHHHHHHHhHhcCCccccccCCC
Q 015261          163 PADDDLEEDDDDGAFEEFDPACCFMCDLPHDAIENCMVHMHKCHGFFIPDVEYLKDPKGLLTYLGLKVKRDFMCLYCNDR  242 (410)
Q Consensus       163 ~~~~~~~~~~~~~~~~~i~p~~ClfC~~~f~~~~~~~~HM~~~Hgf~ip~~~~lvd~~gLl~yl~~ki~~~~~Cl~C~~~  242 (410)
                                       ..|+.|..|++.|.+...|..||.+|||-....                 -...+.|..|+  
T Consensus        76 -----------------~k~~~C~~C~k~F~~~~~L~~H~~~hh~~~p~~-----------------~~k~~~C~~C~--  119 (133)
T 2lt7_A           76 -----------------ERRYQCLACGKSFINYQFMSSHIKSVHSQDPSG-----------------DSKLYRLHPCR--  119 (133)
T ss_dssp             -----------------CCCEEESSSCCEESSHHHHHHHHHHHTCCCTTS-----------------SSCCEEECCCC--
T ss_pred             -----------------CccccCCCCCCCcCCHHHHHHHhHHhcCCCCCC-----------------CCCCeecCCCC--
Confidence                             146789999999999999999999999832111                 02368999998  


Q ss_pred             CcccCCH
Q 015261          243 CHPFNSL  249 (410)
Q Consensus       243 gk~F~s~  249 (410)
                       +.|...
T Consensus       120 -k~~~~~  125 (133)
T 2lt7_A          120 -SLQIRQ  125 (133)
T ss_dssp             -SSCCCC
T ss_pred             -chhhhc
Confidence             777653

>2lt7_A Transcriptional regulator kaiso; zinc finger, double helix, metal binding protein-DNA complex; HET: DNA; NMR {Homo sapiens} PDB: 4f6m_A* 4f6n_A*

Probab=99.11  E-value=5e-11  Score=102.97  Aligned_cols=53  Identities=21%  Similarity=0.418  Sum_probs=47.7

Q ss_pred             CCcccCCCCCCCCChhHHhhhhhhhhcCCCCCcccccChHHHHHHHHhHhcCCccccccCCCCcccCCHHHHHHHHHhc
Q 015261          181 DPACCFMCDLPHDAIENCMVHMHKCHGFFIPDVEYLKDPKGLLTYLGLKVKRDFMCLYCNDRCHPFNSLEAVRKHMEAK  259 (410)
Q Consensus       181 ~p~~ClfC~~~f~~~~~~~~HM~~~Hgf~ip~~~~lvd~~gLl~yl~~ki~~~~~Cl~C~~~gk~F~s~~alr~HM~~k  259 (410)
                      .|+.|.+|++.|.+...|..||.+|.|                       ..++.|..|+   +.|.+...|+.||+..
T Consensus        49 k~~~C~~C~k~F~~~~~L~~H~~~H~~-----------------------~k~~~C~~C~---k~F~~~~~L~~H~~~h  101 (133)
T 2lt7_A           49 KKYPCRYCEKVFPLAEYRTKHEIHHTG-----------------------ERRYQCLACG---KSFINYQFMSSHIKSV  101 (133)
T ss_dssp             SCEECSSSSCEESSHHHHHHHHHHHHT-----------------------CCCEEESSSC---CEESSHHHHHHHHHHH
T ss_pred             CCeeCCccCeecccccchhhhccccCC-----------------------CccccCCCCC---CCcCCHHHHHHHhHHh
Confidence            468999999999999999999998765                       2479999999   9999999999999875

>2kmk_A Zinc finger protein GFI-1; tandem repeat zinc finger domain, protein-DNA complex, DNA-B metal-binding, nucleus; HET: DNA; NMR {Rattus norvegicus}

Probab=99.10  E-value=5.2e-11  Score=91.85  Aligned_cols=51  Identities=22%  Similarity=0.581  Sum_probs=44.9

Q ss_pred             CCcccccccccCChHHHhhhhhhccccchhhhhhcCCCCCCHHHHHHHHHHHHHhhhcCCCCCcccccCcCCccCChHHH
Q 015261            3 GLTCNSCNREFNDDAEQKLHYKSDWHRYNLKRKVAGVPGVTEALFLARQAALAQEKNKNATPMTYSCGLCGKGYRSSKAL   82 (410)
Q Consensus         3 ~ftC~~C~~~F~~~~~qr~H~ksdwHrYNlKRrva~Lppvs~~~F~~k~~~l~~~~~~~~~~~~~~C~~C~K~f~s~~~l   82 (410)
                      ||.|..|+..|.+...|+.|+++  |.                                 +..+|.|.+|++.|.+...|
T Consensus         1 ~~~C~~C~~~f~~~~~l~~H~~~--h~---------------------------------~~~~~~C~~C~~~f~~~~~l   45 (82)
T 2kmk_A            1 SFDCKICGKSFKRSSTLSTHLLI--HS---------------------------------DTRPYPCQYCGKRFHQKSDM   45 (82)
T ss_dssp             CEECSSSCCEESSHHHHHHHHHH--HH---------------------------------TCCCEECSSSCCEESSHHHH
T ss_pred             CccCCCCcccccCchhHHHHHHH--cC---------------------------------CCCCeeCCcCChhhCCHHHH
Confidence            68999999999999999999998  30                                 23579999999999999999


Q ss_pred             HHHHhh
Q 015261           83 AQHLNS   88 (410)
Q Consensus        83 ~~Hl~s   88 (410)
                      ..|++.
T Consensus        46 ~~H~~~   51 (82)
T 2kmk_A           46 KKHTFI   51 (82)
T ss_dssp             HHHHHH
T ss_pred             HHHHHH
Confidence            999863

>2dmi_A Teashirt homolog 3; zinc finger protein 537, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.09  E-value=5.5e-11  Score=98.27  Aligned_cols=55  Identities=20%  Similarity=0.308  Sum_probs=47.9

Q ss_pred             CcccCCCCCCC--CChhHHhhhhhhhhcCCCCCcccccChHHHHHHHHhHhcCCccccccCCCCcccCCHHHHHHHHHhc
Q 015261          182 PACCFMCDLPH--DAIENCMVHMHKCHGFFIPDVEYLKDPKGLLTYLGLKVKRDFMCLYCNDRCHPFNSLEAVRKHMEAK  259 (410)
Q Consensus       182 p~~ClfC~~~f--~~~~~~~~HM~~~Hgf~ip~~~~lvd~~gLl~yl~~ki~~~~~Cl~C~~~gk~F~s~~alr~HM~~k  259 (410)
                      .+.|..|++.|  .+...|..||.+|++                       ..+|.|..|+   +.|.+...|+.||+..
T Consensus        50 ~~~C~~C~~~f~f~~~~~l~~H~~~H~~-----------------------~~~~~C~~C~---k~f~~~~~L~~H~~~h  103 (115)
T 2dmi_A           50 HETDNNNPKRWSKPRKRSLLEMEGKEDA-----------------------QKVLKCMYCG---HSFESLQDLSVHMIKT  103 (115)
T ss_dssp             CCCCCCCCSCCSSCCCCCCCCCCCSCCC-----------------------CSSCBCSSSC---CBCSSHHHHHHHHHHT
T ss_pred             CccCCCCCcccccccHHHHHHHhhccCC-----------------------CcceECCCCC---CccCCHHHHHHHHHHh
Confidence            34699999999  899999999999776                       2479999999   9999999999999987


Q ss_pred             CCc
Q 015261          260 RHC  262 (410)
Q Consensus       260 ~HC  262 (410)
                      .|-
T Consensus       104 h~~  106 (115)
T 2dmi_A          104 KHY  106 (115)
T ss_dssp             TTT
T ss_pred             CCc
Confidence            654

>2dmd_A Zinc finger protein 64, isoforms 1 and 2; ZNF338, nuclear protein, DNA- binding, transcription, C2H2-type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.06  E-value=1.9e-10  Score=91.65  Aligned_cols=52  Identities=25%  Similarity=0.514  Sum_probs=45.6

Q ss_pred             CCCcccccccccCChHHHhhhhhhccccchhhhhhcCCCCCCHHHHHHHHHHHHHhhhcCCCCCcccccCcCCccCChHH
Q 015261            2 PGLTCNSCNREFNDDAEQKLHYKSDWHRYNLKRKVAGVPGVTEALFLARQAALAQEKNKNATPMTYSCGLCGKGYRSSKA   81 (410)
Q Consensus         2 ~~ftC~~C~~~F~~~~~qr~H~ksdwHrYNlKRrva~Lppvs~~~F~~k~~~l~~~~~~~~~~~~~~C~~C~K~f~s~~~   81 (410)
                      .+|.|..|+..|.+...|+.|+++  |                                 .+..+|.|.+|++.|.+...
T Consensus         7 ~~~~C~~C~~~f~~~~~l~~H~~~--h---------------------------------~~~~~~~C~~C~~~f~~~~~   51 (96)
T 2dmd_A            7 GPHKCEVCGKCFSRKDKLKTHMRC--H---------------------------------TGVKPYKCKTCDYAAADSSS   51 (96)
T ss_dssp             CCCCBTTTTBCCCCHHHHHHHGGG--C---------------------------------CCCCSEECSSSCCEESSHHH
T ss_pred             cCeECCCCCCccCCHHHHHHHHHh--c---------------------------------CCCCCEeCCCCCCccCCHHH
Confidence            479999999999999999999997  4                                 12357999999999999999


Q ss_pred             HHHHHhh
Q 015261           82 LAQHLNS   88 (410)
Q Consensus        82 l~~Hl~s   88 (410)
                      |..|++.
T Consensus        52 l~~H~~~   58 (96)
T 2dmd_A           52 LNKHLRI   58 (96)
T ss_dssp             HHHHHHH
T ss_pred             HHHHHHH
Confidence            9999863

>2kmk_A Zinc finger protein GFI-1; tandem repeat zinc finger domain, protein-DNA complex, DNA-B metal-binding, nucleus; HET: DNA; NMR {Rattus norvegicus}

Probab=99.06  E-value=1.9e-10  Score=88.65  Aligned_cols=53  Identities=17%  Similarity=0.365  Sum_probs=47.7

Q ss_pred             CCcccCCCCCCCCChhHHhhhhhhhhcCCCCCcccccChHHHHHHHHhHhcCCccccccCCCCcccCCHHHHHHHHHhc
Q 015261          181 DPACCFMCDLPHDAIENCMVHMHKCHGFFIPDVEYLKDPKGLLTYLGLKVKRDFMCLYCNDRCHPFNSLEAVRKHMEAK  259 (410)
Q Consensus       181 ~p~~ClfC~~~f~~~~~~~~HM~~~Hgf~ip~~~~lvd~~gLl~yl~~ki~~~~~Cl~C~~~gk~F~s~~alr~HM~~k  259 (410)
                      .|+.|.+|++.|.+...|..||..|++                       ..++.|..|+   +.|.+...|+.||+..
T Consensus        28 ~~~~C~~C~~~f~~~~~l~~H~~~h~~-----------------------~~~~~C~~C~---~~f~~~~~l~~H~~~H   80 (82)
T 2kmk_A           28 RPYPCQYCGKRFHQKSDMKKHTFIHTG-----------------------EKPHKCQVCG---KAFSQSSNLITHSRKH   80 (82)
T ss_dssp             CCEECSSSCCEESSHHHHHHHHHHHHT-----------------------CCCEECTTTS---CEESSHHHHHHHHHHH
T ss_pred             CCeeCCcCChhhCCHHHHHHHHHHhcC-----------------------CCCCcCCCcc---hhhCChHHHHHHHHhh
Confidence            357899999999999999999999877                       3479999999   9999999999999864

>2ee8_A Protein ODD-skipped-related 2; zinc binding, ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: k.12.1.1

Probab=99.05  E-value=5.5e-10  Score=90.69  Aligned_cols=53  Identities=17%  Similarity=0.323  Sum_probs=47.6

Q ss_pred             CCcccCCCCCCCCChhHHhhhhhhhhcCCCCCcccccChHHHHHHHHhHhcCCccccccCCCCcccCCHHHHHHHHHhc
Q 015261          181 DPACCFMCDLPHDAIENCMVHMHKCHGFFIPDVEYLKDPKGLLTYLGLKVKRDFMCLYCNDRCHPFNSLEAVRKHMEAK  259 (410)
Q Consensus       181 ~p~~ClfC~~~f~~~~~~~~HM~~~Hgf~ip~~~~lvd~~gLl~yl~~ki~~~~~Cl~C~~~gk~F~s~~alr~HM~~k  259 (410)
                      .++.|.+|++.|.+...|..||..|++                       ..++.|..|+   +.|.+...|+.||+.+
T Consensus        44 ~~~~C~~C~~~f~~~~~l~~H~~~h~~-----------------------~~~~~C~~C~---~~f~~~~~L~~H~~~H   96 (106)
T 2ee8_A           44 RPYTCDICHKAFRRQDHLRDHRYIHSK-----------------------EKPFKCQECG---KGFCQSRTLAVHKTLH   96 (106)
T ss_dssp             CCCBCSSSCCBCSCHHHHHHHGGGSCC-----------------------CCTTSCSSSC---CCCSSHHHHHHHHHHT
T ss_pred             CCcCCCCccchhCCHHHHHHHHHHhCC-----------------------CCCeECCCcC---CcccCHHHHHHHHHHh
Confidence            357899999999999999999999876                       2478999999   9999999999999865

>2yt9_A Zinc finger-containing protein 1; C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.04  E-value=3.4e-10  Score=89.98  Aligned_cols=54  Identities=20%  Similarity=0.538  Sum_probs=47.3

Q ss_pred             CCcccCCCCCCCCChhHHhhhhhhhhcCCCCCcccccChHHHHHHHHhHhcCCccccccCCCCcccCCHHHHHHHHHh
Q 015261          181 DPACCFMCDLPHDAIENCMVHMHKCHGFFIPDVEYLKDPKGLLTYLGLKVKRDFMCLYCNDRCHPFNSLEAVRKHMEA  258 (410)
Q Consensus       181 ~p~~ClfC~~~f~~~~~~~~HM~~~Hgf~ip~~~~lvd~~gLl~yl~~ki~~~~~Cl~C~~~gk~F~s~~alr~HM~~  258 (410)
                      .++.|..|++.|.+...|..||..||+-                     ...++.|..|+   +.|.+...|+.||+.
T Consensus        34 ~~~~C~~C~~~f~~~~~l~~H~~~h~~~---------------------~~~~~~C~~C~---~~f~~~~~L~~H~~~   87 (95)
T 2yt9_A           34 KPYSCPVCGLRFKRKDRMSYHVRSHDGS---------------------VGKPYICQSCG---KGFSRPDHLNGHIKQ   87 (95)
T ss_dssp             CSEECSSSCCEESCHHHHHHHHHHHCCC---------------------CCSSBCCSSSC---CCBSSHHHHHHHHHH
T ss_pred             CCCcCCCCCCccCCHHHHHHHHHHhcCC---------------------CCCceECCCcc---chhCCHHHHHHHHHH
Confidence            3578999999999999999999998872                     02478999999   999999999999974

>2ee8_A Protein ODD-skipped-related 2; zinc binding, ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: k.12.1.1

Probab=99.03  E-value=5.1e-10  Score=90.87  Aligned_cols=51  Identities=25%  Similarity=0.644  Sum_probs=44.7

Q ss_pred             CCCcccccccccCChHHHhhhhhhccccchhhhhhcCCCCCCHHHHHHHHHHHHHhhhcCCCCCcccccCcCCccCChHH
Q 015261            2 PGLTCNSCNREFNDDAEQKLHYKSDWHRYNLKRKVAGVPGVTEALFLARQAALAQEKNKNATPMTYSCGLCGKGYRSSKA   81 (410)
Q Consensus         2 ~~ftC~~C~~~F~~~~~qr~H~ksdwHrYNlKRrva~Lppvs~~~F~~k~~~l~~~~~~~~~~~~~~C~~C~K~f~s~~~   81 (410)
                      .+|.|..|+..|.+...|+.|+++  |                                 .++.+|.|.+|++.|.+...
T Consensus        16 ~~~~C~~C~~~f~~~~~l~~H~~~--h---------------------------------~~~~~~~C~~C~~~f~~~~~   60 (106)
T 2ee8_A           16 KEFICKFCGRHFTKSYNLLIHERT--H---------------------------------TDERPYTCDICHKAFRRQDH   60 (106)
T ss_dssp             CCCBCSSSCCBCSSHHHHHHHHHH--H---------------------------------CCSCCCBCSSSCCBCSCHHH
T ss_pred             cCeECCCCCCccCCHHHHHHHHHH--c---------------------------------CCCCCcCCCCccchhCCHHH
Confidence            469999999999999999999997  3                                 12457999999999999999


Q ss_pred             HHHHHh
Q 015261           82 LAQHLN   87 (410)
Q Consensus        82 l~~Hl~   87 (410)
                      |..|++
T Consensus        61 l~~H~~   66 (106)
T 2ee8_A           61 LRDHRY   66 (106)
T ss_dssp             HHHHGG
T ss_pred             HHHHHH
Confidence            999975

>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C*

Probab=99.02  E-value=5e-10  Score=100.55  Aligned_cols=132  Identities=19%  Similarity=0.375  Sum_probs=97.3

Q ss_pred             CCCcccccccccCChHHHhhhhhhccccchhhhhhcCCCCCCHHHHHHHHHHHHHhhhcCCCCCcccccCcCCccCChHH
Q 015261            2 PGLTCNSCNREFNDDAEQKLHYKSDWHRYNLKRKVAGVPGVTEALFLARQAALAQEKNKNATPMTYSCGLCGKGYRSSKA   81 (410)
Q Consensus         2 ~~ftC~~C~~~F~~~~~qr~H~ksdwHrYNlKRrva~Lppvs~~~F~~k~~~l~~~~~~~~~~~~~~C~~C~K~f~s~~~   81 (410)
                      .+|.|..|+..|.+...|..|+++  |                                 .+..+|.|.+|++.|.+...
T Consensus        20 ~~~~C~~C~~~f~~~~~l~~H~~~--h---------------------------------~~~~~~~C~~C~~~f~~~~~   64 (190)
T 2i13_A           20 KPYACPECGKSFSRSDHLAEHQRT--H---------------------------------TGEKPYKCPECGKSFSDKKD   64 (190)
T ss_dssp             -----------CCSSHHHHHGGGC--C------------------------------------CCEECTTTCCEESSHHH
T ss_pred             CCCcCCCCccccCCHHHHHHHHHH--c---------------------------------CCCCCccCCCcCchhCCHHH
Confidence            369999999999999999999987  4                                 12357899999999999999


Q ss_pred             HHHHHhhhhhhhhhccCCCchhhhhhhccCCCCCCCCCCCCccccCCCCCCCCcccccccCcchhhhhhhcccccccCCC
Q 015261           82 LAQHLNSRSHIMRASQGTSNEEKEKVIIKPIPLRDVNKPPRKREANNEESEDSDDEWEEVGPDEVLVSEATNSLTNLNVG  161 (410)
Q Consensus        82 l~~Hl~skkHk~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~ee~~~~e~~~~~~~~~~~~~~~~  161 (410)
                      |..|++.  |..                                                                    
T Consensus        65 l~~H~~~--h~~--------------------------------------------------------------------   74 (190)
T 2i13_A           65 LTRHQRT--HTG--------------------------------------------------------------------   74 (190)
T ss_dssp             HHHHHHH--HHC--------------------------------------------------------------------
T ss_pred             HHHHHHh--cCC--------------------------------------------------------------------
Confidence            9999863  110                                                                    


Q ss_pred             CCCCCCCccCCCCCCCCCCCCcccCCCCCCCCChhHHhhhhhhhhcCCC--C-Cc-ccccChHHHHHHHHhHhc-CCccc
Q 015261          162 SPADDDLEEDDDDGAFEEFDPACCFMCDLPHDAIENCMVHMHKCHGFFI--P-DV-EYLKDPKGLLTYLGLKVK-RDFMC  236 (410)
Q Consensus       162 ~~~~~~~~~~~~~~~~~~i~p~~ClfC~~~f~~~~~~~~HM~~~Hgf~i--p-~~-~~lvd~~gLl~yl~~ki~-~~~~C  236 (410)
                                        ..++.|.+|++.|.+...|..||..|++-..  + .. ..+.....|..++..+.+ .++.|
T Consensus        75 ------------------~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C  136 (190)
T 2i13_A           75 ------------------EKPYKCPECGKSFSQRANLRAHQRTHTGEKPYACPECGKSFSQLAHLRAHQRTHTGEKPYKC  136 (190)
T ss_dssp             ------------------CCCEECTTTCCEESCHHHHHHHHHHHHTCCCEECTTTCCEESSHHHHHHHHHHHHCCCCEEC
T ss_pred             ------------------CCCccCcccCCccCCHHHHHHHHHhcCCCCCCcCCCCCCccCCHHHHHHHHHHhCCCCCeEC
Confidence                              0357899999999999999999999887422  1 11 345688899999877665 37999


Q ss_pred             cccCCCCcccCCHHHHHHHHHhc
Q 015261          237 LYCNDRCHPFNSLEAVRKHMEAK  259 (410)
Q Consensus       237 l~C~~~gk~F~s~~alr~HM~~k  259 (410)
                      ..|+   +.|.+...|+.||+..
T Consensus       137 ~~C~---~~f~~~~~L~~H~~~H  156 (190)
T 2i13_A          137 PECG---KSFSREDNLHTHQRTH  156 (190)
T ss_dssp             TTTC---CEESCHHHHHHHHHHH
T ss_pred             CCCC---cccCCHHHHHHHHHhc
Confidence            9999   9999999999999874

>2dmd_A Zinc finger protein 64, isoforms 1 and 2; ZNF338, nuclear protein, DNA- binding, transcription, C2H2-type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.02  E-value=2.8e-10  Score=90.60  Aligned_cols=53  Identities=19%  Similarity=0.387  Sum_probs=47.3

Q ss_pred             CCcccCCCCCCCCChhHHhhhhhhhhcCCCCCcccccChHHHHHHHHhHhcCCccccccCCCCcccCCHHHHHHHHHhc
Q 015261          181 DPACCFMCDLPHDAIENCMVHMHKCHGFFIPDVEYLKDPKGLLTYLGLKVKRDFMCLYCNDRCHPFNSLEAVRKHMEAK  259 (410)
Q Consensus       181 ~p~~ClfC~~~f~~~~~~~~HM~~~Hgf~ip~~~~lvd~~gLl~yl~~ki~~~~~Cl~C~~~gk~F~s~~alr~HM~~k  259 (410)
                      .++.|..|++.|.+...|..||..|++                       ..++.|..|+   +.|.+...|+.||+..
T Consensus        35 ~~~~C~~C~~~f~~~~~l~~H~~~h~~-----------------------~~~~~C~~C~---~~f~~~~~l~~H~~~h   87 (96)
T 2dmd_A           35 KPYKCKTCDYAAADSSSLNKHLRIHSD-----------------------ERPFKCQICP---YASRNSSQLTVHLRSH   87 (96)
T ss_dssp             CSEECSSSCCEESSHHHHHHHHHHSCC-----------------------CCCEECSSSS---CEESSHHHHHHHHTTC
T ss_pred             CCEeCCCCCCccCCHHHHHHHHHHhCC-----------------------CCCccCCCCC---CccCCHHHHHHHHHHh
Confidence            357899999999999999999999876                       2478999999   9999999999999864

>1a1h_A QGSR zinc finger peptide; complex (zinc finger/DNA), DNA-binding protein, transcription/DNA complex; HET: DNA; 1.60A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1jk2_A 1jk1_A 1a1g_A* 1a1f_A* 1a1i_A* 1a1j_A* 1a1k_A* 1aay_A* 1a1l_A* 1p47_A 1zaa_C* 1g2f_C 1g2d_C

Probab=98.99  E-value=4.1e-10  Score=88.41  Aligned_cols=53  Identities=19%  Similarity=0.496  Sum_probs=47.5

Q ss_pred             CCcccCCCCCCCCChhHHhhhhhhhhcCCCCCcccccChHHHHHHHHhHhcCCccccccCCCCcccCCHHHHHHHHHhc
Q 015261          181 DPACCFMCDLPHDAIENCMVHMHKCHGFFIPDVEYLKDPKGLLTYLGLKVKRDFMCLYCNDRCHPFNSLEAVRKHMEAK  259 (410)
Q Consensus       181 ~p~~ClfC~~~f~~~~~~~~HM~~~Hgf~ip~~~~lvd~~gLl~yl~~ki~~~~~Cl~C~~~gk~F~s~~alr~HM~~k  259 (410)
                      .++.|.+|++.|.+...|..||..|++                       ..++.|..|+   +.|.+...|+.||+..
T Consensus        33 ~~~~C~~C~~~f~~~~~l~~H~~~h~~-----------------------~~~~~C~~C~---~~f~~~~~l~~H~~~H   85 (90)
T 1a1h_A           33 KPFQCRICMRNFSRSDHLTTHIRTHTG-----------------------EKPFACDICG---RKFARSDERKRHTKIH   85 (90)
T ss_dssp             CCEECTTTCCEESCHHHHHHHHHHHHC-----------------------CCCEECTTTC---CEESSHHHHHHHHGGG
T ss_pred             CCccCCCCCcccCCHHHHHHHHHHcCC-----------------------CCCccCCCCC---chhCCHHHHHHHHHHh
Confidence            357899999999999999999999887                       3478999999   9999999999999863

>2yt9_A Zinc finger-containing protein 1; C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=98.99  E-value=5e-10  Score=88.99  Aligned_cols=52  Identities=29%  Similarity=0.641  Sum_probs=45.8

Q ss_pred             CCCcccccccccCChHHHhhhhhhccccchhhhhhcCCCCCCHHHHHHHHHHHHHhhhcCCCCCcccccCcCCccCChHH
Q 015261            2 PGLTCNSCNREFNDDAEQKLHYKSDWHRYNLKRKVAGVPGVTEALFLARQAALAQEKNKNATPMTYSCGLCGKGYRSSKA   81 (410)
Q Consensus         2 ~~ftC~~C~~~F~~~~~qr~H~ksdwHrYNlKRrva~Lppvs~~~F~~k~~~l~~~~~~~~~~~~~~C~~C~K~f~s~~~   81 (410)
                      .+|.|..|+..|.+...|+.|+++  |.                                 ++.+|.|.+|++.|.+...
T Consensus         6 ~~~~C~~C~~~f~~~~~l~~H~~~--h~---------------------------------~~~~~~C~~C~~~f~~~~~   50 (95)
T 2yt9_A            6 SGVACEICGKIFRDVYHLNRHKLS--HS---------------------------------GEKPYSCPVCGLRFKRKDR   50 (95)
T ss_dssp             SCEECSSSCCEESSSHHHHHHHHH--SC---------------------------------SSCSEECSSSCCEESCHHH
T ss_pred             CCeECCCCCCccCChHHHHHHHHh--cC---------------------------------CCCCCcCCCCCCccCCHHH
Confidence            479999999999999999999998  41                                 2457999999999999999


Q ss_pred             HHHHHhh
Q 015261           82 LAQHLNS   88 (410)
Q Consensus        82 l~~Hl~s   88 (410)
                      |..|++.
T Consensus        51 l~~H~~~   57 (95)
T 2yt9_A           51 MSYHVRS   57 (95)
T ss_dssp             HHHHHHH
T ss_pred             HHHHHHH
Confidence            9999864

>2csh_A Zinc finger protein 297B; ZF-C2H2 domain, zinc finger and BTB domain containing protein 22B, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=98.99  E-value=4e-10  Score=92.27  Aligned_cols=53  Identities=19%  Similarity=0.402  Sum_probs=47.7

Q ss_pred             CCcccCCCCCCCCChhHHhhhhhhhhcCCCCCcccccChHHHHHHHHhHhcCCccccccCCCCcccCCHHHHHHHHHhc
Q 015261          181 DPACCFMCDLPHDAIENCMVHMHKCHGFFIPDVEYLKDPKGLLTYLGLKVKRDFMCLYCNDRCHPFNSLEAVRKHMEAK  259 (410)
Q Consensus       181 ~p~~ClfC~~~f~~~~~~~~HM~~~Hgf~ip~~~~lvd~~gLl~yl~~ki~~~~~Cl~C~~~gk~F~s~~alr~HM~~k  259 (410)
                      .++.|.+|++.|.+...|..||..|++                       ..++.|..|+   +.|.+...|+.||+..
T Consensus        36 ~~~~C~~C~~~f~~~~~l~~H~~~h~~-----------------------~~~~~C~~C~---~~f~~~~~l~~H~~~~   88 (110)
T 2csh_A           36 RPYGCGVCGKKFKMKHHLVGHMKIHTG-----------------------IKPYECNICA---KRFMWRDSFHRHVTSC   88 (110)
T ss_dssp             CSEECTTTSCEESSSHHHHHHHTTTCC-----------------------CCCEECSSSC---CEESCHHHHHHHHHHH
T ss_pred             cCccCCCCCcccCCHHHHHHHHHHcCC-----------------------CCCeeCCCCc---chhcCHHHHHHHHHHc
Confidence            357899999999999999999999876                       2478999999   9999999999999874

>1wjp_A Zinc finger protein 295; ZF-C2H2 domain, zinc binding, nucleic acid binding, KIAA1227 protein, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=98.96  E-value=1.7e-09  Score=88.29  Aligned_cols=57  Identities=21%  Similarity=0.250  Sum_probs=45.1

Q ss_pred             cccCCCCCCCCChhHHhhhhhhhhcCCCCCcccccChHHHHHHHHhHhcCCccccccCCCCcccCCHHHHHHHHHhcCCc
Q 015261          183 ACCFMCDLPHDAIENCMVHMHKCHGFFIPDVEYLKDPKGLLTYLGLKVKRDFMCLYCNDRCHPFNSLEAVRKHMEAKRHC  262 (410)
Q Consensus       183 ~~ClfC~~~f~~~~~~~~HM~~~Hgf~ip~~~~lvd~~gLl~yl~~ki~~~~~Cl~C~~~gk~F~s~~alr~HM~~k~HC  262 (410)
                      +.|..|++.|.+...|..||. |++                       ..+|.|..|+   +.|.+...|+.||+...--
T Consensus        43 ~~C~~C~~~f~~~~~l~~H~~-H~~-----------------------~~~~~C~~C~---~~f~~~~~L~~H~~~~H~~   95 (107)
T 1wjp_A           43 AVCPYCSLRFFSPELKQEHES-KCE-----------------------YKKLTCLECM---RTFKSSFSIWRHQVEVHNQ   95 (107)
T ss_dssp             BCCTTTCCCBSSHHHHHHHHH-HCS-----------------------TGGGEEGGGT---EECSSHHHHHHHHHHTSCC
T ss_pred             ccCCCCCCccCCHHHHHHHHH-cCC-----------------------CCCccCcccc---chhCCHHHHHHHHHHHcCC
Confidence            479999999999999999994 554                       2378999999   9999999999999843322


Q ss_pred             ccCC
Q 015261          263 KIHF  266 (410)
Q Consensus       263 ki~y  266 (410)
                      .-+|
T Consensus        96 ~~~~   99 (107)
T 1wjp_A           96 NNMA   99 (107)
T ss_dssp             CCCC
T ss_pred             CCCC
Confidence            3344

>1a1h_A QGSR zinc finger peptide; complex (zinc finger/DNA), DNA-binding protein, transcription/DNA complex; HET: DNA; 1.60A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1jk2_A 1jk1_A 1a1g_A* 1a1f_A* 1a1i_A* 1a1j_A* 1a1k_A* 1aay_A* 1a1l_A* 1p47_A 1zaa_C* 1g2f_C 1g2d_C

Probab=98.92  E-value=7.5e-10  Score=86.90  Aligned_cols=51  Identities=24%  Similarity=0.624  Sum_probs=44.6

Q ss_pred             CCCccc--ccccccCChHHHhhhhhhccccchhhhhhcCCCCCCHHHHHHHHHHHHHhhhcCCCCCcccccCcCCccCCh
Q 015261            2 PGLTCN--SCNREFNDDAEQKLHYKSDWHRYNLKRKVAGVPGVTEALFLARQAALAQEKNKNATPMTYSCGLCGKGYRSS   79 (410)
Q Consensus         2 ~~ftC~--~C~~~F~~~~~qr~H~ksdwHrYNlKRrva~Lppvs~~~F~~k~~~l~~~~~~~~~~~~~~C~~C~K~f~s~   79 (410)
                      .+|.|.  .|+..|.+...|+.|+++  |.                                 +..+|.|.+|++.|.+.
T Consensus         3 k~~~C~~~~C~~~f~~~~~l~~H~~~--h~---------------------------------~~~~~~C~~C~~~f~~~   47 (90)
T 1a1h_A            3 RPYACPVESCDRRFSQSGSLTRHIRI--HT---------------------------------GQKPFQCRICMRNFSRS   47 (90)
T ss_dssp             CCEECCSSSCCCEESSHHHHHHHHHH--HH---------------------------------CCCCEECTTTCCEESCH
T ss_pred             CceECCCCCCCCccCCHHHHHHHHHH--hC---------------------------------CCCCccCCCCCcccCCH
Confidence            479998  699999999999999997  30                                 23579999999999999


Q ss_pred             HHHHHHHh
Q 015261           80 KALAQHLN   87 (410)
Q Consensus        80 ~~l~~Hl~   87 (410)
                      ..|..|++
T Consensus        48 ~~l~~H~~   55 (90)
T 1a1h_A           48 DHLTTHIR   55 (90)
T ss_dssp             HHHHHHHH
T ss_pred             HHHHHHHH
Confidence            99999986

>2csh_A Zinc finger protein 297B; ZF-C2H2 domain, zinc finger and BTB domain containing protein 22B, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=98.88  E-value=1.1e-09  Score=89.69  Aligned_cols=50  Identities=26%  Similarity=0.688  Sum_probs=43.7

Q ss_pred             CCCcccccccccCChHHHhhhhhhccccchhhhhhcCCCCCCHHHHHHHHHHHHHhhhcCCCCCcccccCcCCccCChHH
Q 015261            2 PGLTCNSCNREFNDDAEQKLHYKSDWHRYNLKRKVAGVPGVTEALFLARQAALAQEKNKNATPMTYSCGLCGKGYRSSKA   81 (410)
Q Consensus         2 ~~ftC~~C~~~F~~~~~qr~H~ksdwHrYNlKRrva~Lppvs~~~F~~k~~~l~~~~~~~~~~~~~~C~~C~K~f~s~~~   81 (410)
                      .+|.| .|+..|.+...|+.|+++  |.                                 ++.+|.|.+|++.|.+...
T Consensus         9 k~~~C-~C~~~f~~~~~l~~H~~~--h~---------------------------------~~~~~~C~~C~~~f~~~~~   52 (110)
T 2csh_A            9 KLYPC-QCGKSFTHKSQRDRHMSM--HL---------------------------------GLRPYGCGVCGKKFKMKHH   52 (110)
T ss_dssp             CCEEC-TTSCEESSHHHHHHHHHH--HS---------------------------------CCCSEECTTTSCEESSSHH
T ss_pred             CCEec-cCCCccCCHHHHHHHHHH--cC---------------------------------CCcCccCCCCCcccCCHHH
Confidence            46999 899999999999999997  31                                 2357999999999999999


Q ss_pred             HHHHHh
Q 015261           82 LAQHLN   87 (410)
Q Consensus        82 l~~Hl~   87 (410)
                      |..|++
T Consensus        53 l~~H~~   58 (110)
T 2csh_A           53 LVGHMK   58 (110)
T ss_dssp             HHHHHT
T ss_pred             HHHHHH
Confidence            999985

>2dlq_A GLI-kruppel family member HKR3; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1

Probab=98.82  E-value=5.8e-09  Score=86.39  Aligned_cols=56  Identities=23%  Similarity=0.331  Sum_probs=46.9

Q ss_pred             CCcccCCCCCCCCChhHHhhhhhhhhcCCCCCcccccChHHHHHHHHhHhcCCccccccCCCCcccCCHHHHHHHHHhc
Q 015261          181 DPACCFMCDLPHDAIENCMVHMHKCHGFFIPDVEYLKDPKGLLTYLGLKVKRDFMCLYCNDRCHPFNSLEAVRKHMEAK  259 (410)
Q Consensus       181 ~p~~ClfC~~~f~~~~~~~~HM~~~Hgf~ip~~~~lvd~~gLl~yl~~ki~~~~~Cl~C~~~gk~F~s~~alr~HM~~k  259 (410)
                      .|+.|.+|++.|.+...|..||..+|.-                    ....++.|..|+   +.|.+...|+.||+..
T Consensus        34 ~~~~C~~C~~~f~~~~~l~~H~~~~~~~--------------------~~~~~~~C~~C~---~~f~~~~~l~~H~~~h   89 (124)
T 2dlq_A           34 KPFECPKCGKCYFRKENLLEHEARNCMN--------------------RSEQVFTCSVCQ---ETFRRRMELRLHMVSH   89 (124)
T ss_dssp             CSCBCTTTCCBCSSHHHHHHHHHHCCCC--------------------SCCCCEECSSSC---CEESSHHHHHHHHHHH
T ss_pred             CCeECCCCCchhcCHHHHHHHHhhhhcC--------------------CCCCCeECCCCC---CccCCHHHHHHHHHHc
Confidence            3578999999999999999999986421                    012478999999   9999999999999874

>1zu1_A DSRBP-ZFA, RNA binding protein ZFA; zinc finger protein, helix-loop-helix, helix-turn-helix; NMR {Xenopus laevis} SCOP: g.37.1.4 g.37.1.4

Probab=98.82  E-value=1.5e-09  Score=93.28  Aligned_cols=90  Identities=19%  Similarity=0.349  Sum_probs=66.1

Q ss_pred             CCCcccccccccCChHHHhhhhhhccccchhhhhhcCCC---CCCHHHHHHHHHHHHHhhhcCCCCCcccccCcCCccCC
Q 015261            2 PGLTCNSCNREFNDDAEQKLHYKSDWHRYNLKRKVAGVP---GVTEALFLARQAALAQEKNKNATPMTYSCGLCGKGYRS   78 (410)
Q Consensus         2 ~~ftC~~C~~~F~~~~~qr~H~ksdwHrYNlKRrva~Lp---pvs~~~F~~k~~~l~~~~~~~~~~~~~~C~~C~K~f~s   78 (410)
                      .++.|..|++.|.+...+..||++.||+.||++.+.+..   |+..    .++.. ..+.........|.|.+|++.|.+
T Consensus        31 ~~~~C~~C~v~~~S~s~~~~H~~gkkH~~~v~~~~~~~~~~~~~~~----~~~~~-~~~~~~~~~~~~~~C~~C~~~f~s  105 (127)
T 1zu1_A           31 SDTQCKVCSAVLISESQKLAHYQSRKHANKVRRYMAINQGEDSVPA----KKFKA-APAEISDGEDRSKCCPVCNMTFSS  105 (127)
T ss_dssp             CSSEETTTTEECCSHHHHHHHHHCHHHHHHHHHHHHHTTCCCCCSC----CCCSC-CSSCCSSCCCTTTEETTTTEECSS
T ss_pred             CCCcCcCCCCEeCCHHHHHHHHCcHHHHHHHHHHhcccCcccCCCC----CccCC-CccccccCCCCCeEcCCCCCEeCC
Confidence            357899999999999999999999999999997765321   1100    00000 000111234567899999999999


Q ss_pred             hHHHHHHHhhhhhhhhhc
Q 015261           79 SKALAQHLNSRSHIMRAS   96 (410)
Q Consensus        79 ~~~l~~Hl~skkHk~~~~   96 (410)
                      ...+.+|+.+|+|+.+.+
T Consensus       106 ~~~~~~H~~gk~H~~~~~  123 (127)
T 1zu1_A          106 PVVAESHYIGKTHIKNLR  123 (127)
T ss_dssp             HHHHHHHHTSHHHHHHHH
T ss_pred             HHHHHHHHCCHHHHHHHH
Confidence            999999999999998654

>1wjp_A Zinc finger protein 295; ZF-C2H2 domain, zinc binding, nucleic acid binding, KIAA1227 protein, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=98.82  E-value=2e-09  Score=87.87  Aligned_cols=48  Identities=23%  Similarity=0.358  Sum_probs=42.8

Q ss_pred             CCCcccccccccCChHHHhhhhhhccccchhhhhhcCCCCCCHHHHHHHHHHHHHhhhcCCCCCcccccCcCCccCChHH
Q 015261            2 PGLTCNSCNREFNDDAEQKLHYKSDWHRYNLKRKVAGVPGVTEALFLARQAALAQEKNKNATPMTYSCGLCGKGYRSSKA   81 (410)
Q Consensus         2 ~~ftC~~C~~~F~~~~~qr~H~ksdwHrYNlKRrva~Lppvs~~~F~~k~~~l~~~~~~~~~~~~~~C~~C~K~f~s~~~   81 (410)
                      .+|.|..|+..|.+...|+.|+++  |.                                   .+|.|.+|++.|.+...
T Consensus        15 ~~~~C~~C~~~f~~~~~l~~H~~~--H~-----------------------------------~~~~C~~C~~~f~~~~~   57 (107)
T 1wjp_A           15 EVYQCRLCNAKLSSLLEQGSHERL--CR-----------------------------------NAAVCPYCSLRFFSPEL   57 (107)
T ss_dssp             CCCBCTTTCCBCSSHHHHHHHHHH--HH-----------------------------------HSBCCTTTCCCBSSHHH
T ss_pred             cCeECCCCCCccCCHHHHHHHHHH--CC-----------------------------------CCccCCCCCCccCCHHH
Confidence            479999999999999999999998  40                                   15789999999999999


Q ss_pred             HHHHH
Q 015261           82 LAQHL   86 (410)
Q Consensus        82 l~~Hl   86 (410)
                      |..|+
T Consensus        58 l~~H~   62 (107)
T 1wjp_A           58 KQEHE   62 (107)
T ss_dssp             HHHHH
T ss_pred             HHHHH
Confidence            99998

>1llm_C Chimera of ZIF23-GCN4; dimerization, DNA recognition, leucine zipper, X-RAY crystallography, structure-based design, zinc fingers; 1.50A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 PDB: 1xf7_A

Probab=98.81  E-value=5.7e-10  Score=88.02  Aligned_cols=52  Identities=10%  Similarity=0.073  Sum_probs=46.4

Q ss_pred             CCcccCCCCCCCCChhHHhhhhhhhhcCCCCCcccccChHHHHHHHHhHhcCCccccccCCCCcccCCHHHHHHHHHhc
Q 015261          181 DPACCFMCDLPHDAIENCMVHMHKCHGFFIPDVEYLKDPKGLLTYLGLKVKRDFMCLYCNDRCHPFNSLEAVRKHMEAK  259 (410)
Q Consensus       181 ~p~~ClfC~~~f~~~~~~~~HM~~~Hgf~ip~~~~lvd~~gLl~yl~~ki~~~~~Cl~C~~~gk~F~s~~alr~HM~~k  259 (410)
                      .|+.|..|++.|.+...|..||..||+                        .++.|..|+   +.|.+...|+.||+..
T Consensus        30 ~~~~C~~C~k~f~~~~~L~~H~~~h~~------------------------~~~~c~~C~---~~f~~~~~L~~H~~~~   81 (88)
T 1llm_C           30 KPFACDICGRKFARSDERKRHRDIQHI------------------------LPILEDKVE---ELLSKNYHLENEVARL   81 (88)
T ss_dssp             CCEECTTTCCEESSHHHHHHHHHHHTH------------------------HHHHHHHHH---HHHHHHHHHHHHHHHH
T ss_pred             CCccCCCCCCccCCHHHHHHHHHHhCC------------------------CcchHHHHH---HHHHHHhhhHHHHHHH
Confidence            367899999999999999999999885                        257899999   9999999999999863

>2ebt_A Krueppel-like factor 5; C2H2-type zinc-finger, metal BIND, transcription factor, kruppel-like factor, GC-box promoter elements, structural genomics; NMR {Homo sapiens}

Probab=98.79  E-value=8.5e-09  Score=82.38  Aligned_cols=52  Identities=27%  Similarity=0.528  Sum_probs=45.9

Q ss_pred             CcccC--CCCCCCCChhHHhhhhhhhhcCCCCCcccccChHHHHHHHHhHhcCCccccccCCCCcccCCHHHHHHHHHhc
Q 015261          182 PACCF--MCDLPHDAIENCMVHMHKCHGFFIPDVEYLKDPKGLLTYLGLKVKRDFMCLYCNDRCHPFNSLEAVRKHMEAK  259 (410)
Q Consensus       182 p~~Cl--fC~~~f~~~~~~~~HM~~~Hgf~ip~~~~lvd~~gLl~yl~~ki~~~~~Cl~C~~~gk~F~s~~alr~HM~~k  259 (410)
                      ++.|.  .|++.|.+...|..||.+|++                       ..+|.|..|+   +.|.+...|+.||+.+
T Consensus        45 ~~~C~~~~C~~~f~~~~~l~~H~~~h~~-----------------------~~~~~C~~C~---~~f~~~~~l~~H~~~H   98 (100)
T 2ebt_A           45 PYKCTWEGCDWRFARSDELTRHYRKHTG-----------------------AKPFQCGVCN---RSFSRSDHLALHMKRH   98 (100)
T ss_dssp             CEECCSSSCCCEESSHHHHHHHHHHHTS-----------------------CCSCBCSSSC---CBCSSHHHHHHHHHHH
T ss_pred             CeeCCCCCCCCccCCHHHHHHHHHHhCC-----------------------CCCeECCCCc---CccCCHHHHHHHHHHh
Confidence            56786  499999999999999999876                       2479999999   9999999999999864

>2wbs_A Krueppel-like factor 4; transcription-DNA complex, DNA-binding, transcription, metal-binding, DNA, protein, nucleus, activator; 1.70A {Mus musculus} PDB: 2wbu_A

Probab=98.79  E-value=4.7e-09  Score=82.07  Aligned_cols=53  Identities=25%  Similarity=0.525  Sum_probs=46.5

Q ss_pred             CCcccCC--CCCCCCChhHHhhhhhhhhcCCCCCcccccChHHHHHHHHhHhcCCccccccCCCCcccCCHHHHHHHHHh
Q 015261          181 DPACCFM--CDLPHDAIENCMVHMHKCHGFFIPDVEYLKDPKGLLTYLGLKVKRDFMCLYCNDRCHPFNSLEAVRKHMEA  258 (410)
Q Consensus       181 ~p~~Clf--C~~~f~~~~~~~~HM~~~Hgf~ip~~~~lvd~~gLl~yl~~ki~~~~~Cl~C~~~gk~F~s~~alr~HM~~  258 (410)
                      .++.|.+  |++.|.+...|..||..|+|                       ..++.|..|+   +.|.+...|+.||+.
T Consensus        34 ~~~~C~~~~C~~~f~~~~~l~~H~~~h~~-----------------------~~~~~C~~C~---~~f~~~~~l~~H~~~   87 (89)
T 2wbs_A           34 KPYHCDWDGCGWKFARSDELTRHYRKHTG-----------------------HRPFQCQKCD---RAFSRSDHLALHMKR   87 (89)
T ss_dssp             CCEECCSTTTCCEESSHHHHHHHHHHHHC-----------------------CCCEECSSSS---CEESSHHHHHHHGGG
T ss_pred             CCcCCCCCCCCCccCCHHHHHHHHHHcCC-----------------------CCCccCCCCC---cccCCHHHHHHHHHh
Confidence            3578975  99999999999999999877                       2478999999   999999999999985


Q ss_pred             c
Q 015261          259 K  259 (410)
Q Consensus       259 k  259 (410)
                      +
T Consensus        88 H   88 (89)
T 2wbs_A           88 H   88 (89)
T ss_dssp             G
T ss_pred             h
Confidence            3

>4gzn_C ZFP-57, zinc finger protein 57; transcription-DNA complex; HET: DNA 5CM; 0.99A {Mus musculus}

Probab=98.77  E-value=2.7e-09  Score=79.74  Aligned_cols=52  Identities=27%  Similarity=0.564  Sum_probs=47.6

Q ss_pred             CCCcccccccccCChHHHhhhhhhccccchhhhhhcCCCCCCHHHHHHHHHHHHHhhhcCCCCCcccccCcCCccCChHH
Q 015261            2 PGLTCNSCNREFNDDAEQKLHYKSDWHRYNLKRKVAGVPGVTEALFLARQAALAQEKNKNATPMTYSCGLCGKGYRSSKA   81 (410)
Q Consensus         2 ~~ftC~~C~~~F~~~~~qr~H~ksdwHrYNlKRrva~Lppvs~~~F~~k~~~l~~~~~~~~~~~~~~C~~C~K~f~s~~~   81 (410)
                      -||.|..|+..|.....|+.|+++  |                                 +++++|.|.+|+|.|.....
T Consensus         3 Kpy~C~~C~k~F~~~~~L~~H~~~--H---------------------------------t~ekp~~C~~C~k~F~~~~~   47 (60)
T 4gzn_C            3 RPFFCNFCGKTYRDASGLSRHRRA--H---------------------------------LGYRPRSCPECGKCFRDQSE   47 (60)
T ss_dssp             CCEECTTTCCEESSHHHHHHHHHH--H---------------------------------HTCCCEECTTTCCEESSHHH
T ss_pred             CCccCCCCCCEeCCHHHHHHHHHH--h---------------------------------CCCcCeECCCCCCCcCCHHH
Confidence            379999999999999999999998  5                                 25679999999999999999


Q ss_pred             HHHHHhh
Q 015261           82 LAQHLNS   88 (410)
Q Consensus        82 l~~Hl~s   88 (410)
                      |..|++.
T Consensus        48 L~~H~~~   54 (60)
T 4gzn_C           48 VNRHLKV   54 (60)
T ss_dssp             HHHHGGG
T ss_pred             HHHHhCc
Confidence            9999975

>2jp9_A Wilms tumor 1; DNA binding, nucleic acid recognition, X-RAY; HET: DNA; NMR {Homo sapiens} PDB: 2jpa_A* 2prt_A*

Probab=98.77  E-value=1.3e-08  Score=83.85  Aligned_cols=52  Identities=19%  Similarity=0.469  Sum_probs=46.6

Q ss_pred             CcccC--CCCCCCCChhHHhhhhhhhhcCCCCCcccccChHHHHHHHHhHhcCCccccccCCCCcccCCHHHHHHHHHhc
Q 015261          182 PACCF--MCDLPHDAIENCMVHMHKCHGFFIPDVEYLKDPKGLLTYLGLKVKRDFMCLYCNDRCHPFNSLEAVRKHMEAK  259 (410)
Q Consensus       182 p~~Cl--fC~~~f~~~~~~~~HM~~~Hgf~ip~~~~lvd~~gLl~yl~~ki~~~~~Cl~C~~~gk~F~s~~alr~HM~~k  259 (410)
                      |+.|.  .|++.|.+...|..||..|++                       ..++.|..|+   +.|.+...|+.||+..
T Consensus        36 ~~~C~~~~C~~~f~~~~~l~~H~~~h~~-----------------------~~~~~C~~C~---~~f~~~~~l~~H~~~h   89 (119)
T 2jp9_A           36 PYQCDFKDCERRFSRSDQLKRHQRRHTG-----------------------VKPFQCKTCQ---RKFSRSDHLKTHTRTH   89 (119)
T ss_dssp             CEECCSTTCCCEESSHHHHHHHHHHHHC-----------------------CCCEECTTTC---CEESCHHHHHHHHHHH
T ss_pred             CccCCCCCCcCccCCHHHHHHHHHHcCC-----------------------CCCccCCccC---chhCCHHHHHHHHHHh
Confidence            56898  599999999999999999876                       2478999999   9999999999999864

>4gzn_C ZFP-57, zinc finger protein 57; transcription-DNA complex; HET: DNA 5CM; 0.99A {Mus musculus}

Probab=98.75  E-value=4.2e-09  Score=78.73  Aligned_cols=53  Identities=21%  Similarity=0.382  Sum_probs=48.5

Q ss_pred             CCcccCCCCCCCCChhHHhhhhhhhhcCCCCCcccccChHHHHHHHHhHhcCCccccccCCCCcccCCHHHHHHHHHhc
Q 015261          181 DPACCFMCDLPHDAIENCMVHMHKCHGFFIPDVEYLKDPKGLLTYLGLKVKRDFMCLYCNDRCHPFNSLEAVRKHMEAK  259 (410)
Q Consensus       181 ~p~~ClfC~~~f~~~~~~~~HM~~~Hgf~ip~~~~lvd~~gLl~yl~~ki~~~~~Cl~C~~~gk~F~s~~alr~HM~~k  259 (410)
                      .|+.|..||+.|.+...|..||++|-|                       ..+|.|..|+   +.|.....|+.||+.+
T Consensus         3 Kpy~C~~C~k~F~~~~~L~~H~~~Ht~-----------------------ekp~~C~~C~---k~F~~~~~L~~H~~~H   55 (60)
T 4gzn_C            3 RPFFCNFCGKTYRDASGLSRHRRAHLG-----------------------YRPRSCPECG---KCFRDQSEVNRHLKVH   55 (60)
T ss_dssp             CCEECTTTCCEESSHHHHHHHHHHHHT-----------------------CCCEECTTTC---CEESSHHHHHHHGGGG
T ss_pred             CCccCCCCCCEeCCHHHHHHHHHHhCC-----------------------CcCeECCCCC---CCcCCHHHHHHHhCcc
Confidence            689999999999999999999999766                       3489999999   9999999999999863

>2ebt_A Krueppel-like factor 5; C2H2-type zinc-finger, metal BIND, transcription factor, kruppel-like factor, GC-box promoter elements, structural genomics; NMR {Homo sapiens}

Probab=98.75  E-value=1.2e-08  Score=81.41  Aligned_cols=51  Identities=22%  Similarity=0.512  Sum_probs=43.7

Q ss_pred             CCCcccc--cccccCChHHHhhhhhhccccchhhhhhcCCCCCCHHHHHHHHHHHHHhhhcCCCCCccccc--CcCCccC
Q 015261            2 PGLTCNS--CNREFNDDAEQKLHYKSDWHRYNLKRKVAGVPGVTEALFLARQAALAQEKNKNATPMTYSCG--LCGKGYR   77 (410)
Q Consensus         2 ~~ftC~~--C~~~F~~~~~qr~H~ksdwHrYNlKRrva~Lppvs~~~F~~k~~~l~~~~~~~~~~~~~~C~--~C~K~f~   77 (410)
                      .+|.|..  |+..|.+...|+.|+++  |                                 .++.+|.|.  .|++.|.
T Consensus        14 ~~~~C~~~~C~~~f~~~~~l~~H~~~--h---------------------------------~~~~~~~C~~~~C~~~f~   58 (100)
T 2ebt_A           14 RIHYCDYPGCTKVYTKSSHLKAHLRT--H---------------------------------TGEKPYKCTWEGCDWRFA   58 (100)
T ss_dssp             CCEECCSSSCCCEESCHHHHHHHHHH--H---------------------------------SCCCCEECCSSSCCCEES
T ss_pred             cceEcCCCCCCCcccCHHHHHHHHHH--h---------------------------------CCCCCeeCCCCCCCCccC
Confidence            3689997  99999999999999997  4                                 124578996  6999999


Q ss_pred             ChHHHHHHHh
Q 015261           78 SSKALAQHLN   87 (410)
Q Consensus        78 s~~~l~~Hl~   87 (410)
                      +...|..|++
T Consensus        59 ~~~~l~~H~~   68 (100)
T 2ebt_A           59 RSDELTRHYR   68 (100)
T ss_dssp             SHHHHHHHHH
T ss_pred             CHHHHHHHHH
Confidence            9999999985

>1tf6_A Protein (transcription factor IIIA); complex (transcription regulation/DNA), RNA polymerase III, transcription initiation, zinc finger protein; HET: DNA; 3.10A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1tf3_A

Probab=98.73  E-value=2.8e-08  Score=88.99  Aligned_cols=132  Identities=20%  Similarity=0.403  Sum_probs=106.0

Q ss_pred             CCCcc--cccccccCChHHHhhhhhhccccchhhhhhcCCCCCCHHHHHHHHHHHHHhhhcCCCCCcccc--cCcCCccC
Q 015261            2 PGLTC--NSCNREFNDDAEQKLHYKSDWHRYNLKRKVAGVPGVTEALFLARQAALAQEKNKNATPMTYSC--GLCGKGYR   77 (410)
Q Consensus         2 ~~ftC--~~C~~~F~~~~~qr~H~ksdwHrYNlKRrva~Lppvs~~~F~~k~~~l~~~~~~~~~~~~~~C--~~C~K~f~   77 (410)
                      .+|.|  ..|+..|.+...|+.|+++  |                                 .++.+|.|  .+|++.|.
T Consensus        11 ~~~~C~~~~C~~~f~~~~~L~~H~~~--h---------------------------------~~~~~~~C~~~~C~~~f~   55 (190)
T 1tf6_A           11 KRYICSFADCGAAYNKNWKLQAHLCK--H---------------------------------TGEKPFPCKEEGCEKGFT   55 (190)
T ss_dssp             CCCBCSSTTTCCBCSSHHHHHHHHHH--H---------------------------------HCCCSSCCSSTTCCCCCS
T ss_pred             cceeCCCCCCcchhCCHHHHHHHHHh--c---------------------------------CCCCCccCCCCCCChhhC
Confidence            46999  6899999999999999997  4                                 13457899  89999999


Q ss_pred             ChHHHHHHHhhhhhhhhhccCCCchhhhhhhccCCCCCCCCCCCCccccCCCCCCCCcccccccCcchhhhhhhcccccc
Q 015261           78 SSKALAQHLNSRSHIMRASQGTSNEEKEKVIIKPIPLRDVNKPPRKREANNEESEDSDDEWEEVGPDEVLVSEATNSLTN  157 (410)
Q Consensus        78 s~~~l~~Hl~skkHk~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~ee~~~~e~~~~~~~~~~~~  157 (410)
                      +...|..|++.  |..                                                                
T Consensus        56 ~~~~l~~H~~~--h~~----------------------------------------------------------------   69 (190)
T 1tf6_A           56 SLHHLTRHSLT--HTG----------------------------------------------------------------   69 (190)
T ss_dssp             SHHHHHHHHTT--TTT----------------------------------------------------------------
T ss_pred             CHHHHHHHHHH--ccC----------------------------------------------------------------
Confidence            99999999853  110                                                                


Q ss_pred             cCCCCCCCCCCccCCCCCCCCCCCCcccC--CCCCCCCChhHHhhhhhhhhcC----CCC---Cc-ccccChHHHHHHHH
Q 015261          158 LNVGSPADDDLEEDDDDGAFEEFDPACCF--MCDLPHDAIENCMVHMHKCHGF----FIP---DV-EYLKDPKGLLTYLG  227 (410)
Q Consensus       158 ~~~~~~~~~~~~~~~~~~~~~~i~p~~Cl--fC~~~f~~~~~~~~HM~~~Hgf----~ip---~~-~~lvd~~gLl~yl~  227 (410)
                                            ..|+.|.  .|++.|.+...|..||..+|+.    |..   .. ..+.....|..|+.
T Consensus        70 ----------------------~~~~~C~~~~C~~~f~~~~~l~~H~~~~h~~~~~~~~C~~~~C~k~f~~~~~L~~H~~  127 (190)
T 1tf6_A           70 ----------------------EKNFTCDSDGCDLRFTTKANMKKHFNRFHNIKICVYVCHFENCGKAFKKHNQLKVHQF  127 (190)
T ss_dssp             ----------------------CCCEECCSSSCCCEESCHHHHHHHHHTTSSTTTSCCEECSSSSCEECSSHHHHHHHHG
T ss_pred             ----------------------CCceeCCCCCCCCccCCHHHHHHHHHHhcCCCcceeeCCCCCCccccCCHHHHHHHHH
Confidence                                  1357898  8999999999999999777742    222   22 34578899999988


Q ss_pred             hHhcC-Cccccc--cCCCCcccCCHHHHHHHHHhc
Q 015261          228 LKVKR-DFMCLY--CNDRCHPFNSLEAVRKHMEAK  259 (410)
Q Consensus       228 ~ki~~-~~~Cl~--C~~~gk~F~s~~alr~HM~~k  259 (410)
                      .+.+. ++.|..  |+   +.|.+...|+.||+..
T Consensus       128 ~H~~~~~~~C~~~~C~---k~F~~~~~L~~H~~~H  159 (190)
T 1tf6_A          128 SHTQQLPYECPHEGCD---KRFSLPSRLKRHEKVH  159 (190)
T ss_dssp             GGSSSCSSBCCSSSCC---CBCSSHHHHHHHHTSS
T ss_pred             HhCCCCCccCCCCCCC---chhcCHHHHHHHHHHh
Confidence            76653 799988  99   9999999999999864

>1bbo_A Human enhancer-binding protein MBP-1; DNA-binding protein; HET: ABA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 PDB: 3znf_A 4znf_A

Probab=98.73  E-value=1.2e-08  Score=73.32  Aligned_cols=55  Identities=25%  Similarity=0.515  Sum_probs=49.3

Q ss_pred             CcccCCCCCCCCChhHHhhhhhhhhcCCCCCcccccChHHHHHHHHhHhcCCccccccCCCCcccCCHHHHHHHHHhcCC
Q 015261          182 PACCFMCDLPHDAIENCMVHMHKCHGFFIPDVEYLKDPKGLLTYLGLKVKRDFMCLYCNDRCHPFNSLEAVRKHMEAKRH  261 (410)
Q Consensus       182 p~~ClfC~~~f~~~~~~~~HM~~~Hgf~ip~~~~lvd~~gLl~yl~~ki~~~~~Cl~C~~~gk~F~s~~alr~HM~~k~H  261 (410)
                      |+.|..|++.|.+...|..||..|++                       ..++.|..|+   +.|.+...|+.||+.+.+
T Consensus         1 p~~C~~C~~~f~~~~~l~~H~~~h~~-----------------------~~~~~C~~C~---~~f~~~~~l~~H~~~h~~   54 (57)
T 1bbo_A            1 KYICEECGIRXKKPSMLKKHIRTHTD-----------------------VRPYHCTYCN---FSFKTKGNLTKHMKSKAH   54 (57)
T ss_dssp             CCBCTTTCCBCSSHHHHHHHHHHTSS-----------------------CCCEECSSSS---CEESSHHHHHHHHHSSSS
T ss_pred             CCcCCCCcCcCCCHHHHHHHHHhcCC-----------------------CCCccCCCCC---chhcCHHHHHHHHHHhcc
Confidence            67899999999999999999999776                       2479999999   999999999999997755


Q ss_pred             c
Q 015261          262 C  262 (410)
Q Consensus       262 C  262 (410)
                      -
T Consensus        55 ~   55 (57)
T 1bbo_A           55 S   55 (57)
T ss_dssp             C
T ss_pred             c
Confidence            3

>2rpc_A Zinc finger protein ZIC 3; ZF-C2H2, zinc finger protein of the cerebellum 3, disease mutation, DNA-binding, metal-binding, nucleus, polymorphism; NMR {Homo sapiens}

Probab=98.70  E-value=2.7e-08  Score=86.04  Aligned_cols=52  Identities=19%  Similarity=0.327  Sum_probs=46.8

Q ss_pred             CcccCCCCCCCCChhHHhhhhhhhhcCCCCCcccccChHHHHHHHHhHhcCCccccc--cCCCCcccCCHHHHHHHHHhc
Q 015261          182 PACCFMCDLPHDAIENCMVHMHKCHGFFIPDVEYLKDPKGLLTYLGLKVKRDFMCLY--CNDRCHPFNSLEAVRKHMEAK  259 (410)
Q Consensus       182 p~~ClfC~~~f~~~~~~~~HM~~~Hgf~ip~~~~lvd~~gLl~yl~~ki~~~~~Cl~--C~~~gk~F~s~~alr~HM~~k  259 (410)
                      ++.|..|++.|.+...|..||.+|++                       ..++.|.+  |+   +.|.+...|+.||+.+
T Consensus        62 ~~~C~~C~~~f~~~~~l~~H~~~h~~-----------------------~~~~~C~~~~C~---~~f~~~~~L~~H~~~h  115 (155)
T 2rpc_A           62 WEECPREGKSFKAKYKLVNHIRVHTG-----------------------EKPFPCPFPGCG---KIFARSENLKIHKRTH  115 (155)
T ss_dssp             BTTCTTSSCCCSSHHHHHHHTHHHHC-----------------------CCSEECSCTTTC---CEESCHHHHHHHHTTT
T ss_pred             ccCCCCcccccCCHHHHHHHHHhcCC-----------------------CCcccCCcCCCC---CccCCHHHHHHHHHhh
Confidence            46899999999999999999999876                       24789998  99   9999999999999853

>2gli_A Protein (five-finger GLI); protein/DNA complex, transcription/DNA complex; HET: DNA; 2.60A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1

Probab=98.69  E-value=1e-08  Score=88.53  Aligned_cols=27  Identities=22%  Similarity=0.463  Sum_probs=25.5

Q ss_pred             CCcccCC--CCCCCCChhHHhhhhhhhhc
Q 015261          181 DPACCFM--CDLPHDAIENCMVHMHKCHG  207 (410)
Q Consensus       181 ~p~~Clf--C~~~f~~~~~~~~HM~~~Hg  207 (410)
                      .|+.|.+  |++.|.+...|..||.+|||
T Consensus       127 ~~~~C~~~~C~~~f~~~~~L~~H~~~hhg  155 (155)
T 2gli_A          127 KPYVCKLPGCTKRYTDPSSLRKHVKTVHG  155 (155)
T ss_dssp             CCEECCSTTTCCEESSHHHHHHHHHHSCC
T ss_pred             CCeeCCCCCCccccCCHHHHHHHHHhhcC
Confidence            5789999  99999999999999999987

>1ubd_C Protein (YY1 zinc finger domain); transcription initiation, initiator element, zinc finger protein, DNA- protein recognition; HET: DNA; 2.50A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1znm_A*

Probab=98.69  E-value=1.9e-08  Score=83.62  Aligned_cols=52  Identities=19%  Similarity=0.387  Sum_probs=46.6

Q ss_pred             CcccCCCCCCCCChhHHhhhhhhhhcCCCCCcccccChHHHHHHHHhHhcCCccccc--cCCCCcccCCHHHHHHHHHhc
Q 015261          182 PACCFMCDLPHDAIENCMVHMHKCHGFFIPDVEYLKDPKGLLTYLGLKVKRDFMCLY--CNDRCHPFNSLEAVRKHMEAK  259 (410)
Q Consensus       182 p~~ClfC~~~f~~~~~~~~HM~~~Hgf~ip~~~~lvd~~gLl~yl~~ki~~~~~Cl~--C~~~gk~F~s~~alr~HM~~k  259 (410)
                      ++.|..|++.|.+...|..||..|++                       ..++.|.+  |+   +.|.+...|+.||+..
T Consensus        34 ~~~C~~C~~~f~~~~~l~~H~~~h~~-----------------------~~~~~C~~~~C~---~~f~~~~~l~~H~~~h   87 (124)
T 1ubd_C           34 VHVCAECGKAFVESSKLKRHQLVHTG-----------------------EKPFQCTFEGCG---KRFSLDFNLRTHVRIH   87 (124)
T ss_dssp             CEECTTTCCEESSHHHHHHHGGGTSC-----------------------CCCEECCSTTCC---CEESCHHHHHHHHHHH
T ss_pred             CeECCCCCchhCCHHHHHHHHHHcCC-----------------------CCCeeCCCCCCc---CccCCHHHHHHHHHHh
Confidence            56899999999999999999999876                       24789987  99   9999999999999864

>2wbs_A Krueppel-like factor 4; transcription-DNA complex, DNA-binding, transcription, metal-binding, DNA, protein, nucleus, activator; 1.70A {Mus musculus} PDB: 2wbu_A

Probab=98.69  E-value=1.8e-08  Score=78.67  Aligned_cols=51  Identities=25%  Similarity=0.629  Sum_probs=44.4

Q ss_pred             CCCcccc--cccccCChHHHhhhhhhccccchhhhhhcCCCCCCHHHHHHHHHHHHHhhhcCCCCCccccc--CcCCccC
Q 015261            2 PGLTCNS--CNREFNDDAEQKLHYKSDWHRYNLKRKVAGVPGVTEALFLARQAALAQEKNKNATPMTYSCG--LCGKGYR   77 (410)
Q Consensus         2 ~~ftC~~--C~~~F~~~~~qr~H~ksdwHrYNlKRrva~Lppvs~~~F~~k~~~l~~~~~~~~~~~~~~C~--~C~K~f~   77 (410)
                      .+|+|..  |+..|.+...|+.|+++  |                                 .++.+|.|.  .|++.|.
T Consensus         4 ~~~~C~~~~C~~~f~~~~~l~~H~~~--h---------------------------------~~~~~~~C~~~~C~~~f~   48 (89)
T 2wbs_A            4 ATHTCDYAGCGKTYTKSSHLKAHLRT--H---------------------------------TGEKPYHCDWDGCGWKFA   48 (89)
T ss_dssp             CCEECCSTTTCCEESSHHHHHHHHTT--S---------------------------------CSSCCEECCSTTTCCEES
T ss_pred             CCeeCCCCCCCCcCCCHHHHHHHHHh--c---------------------------------CCCCCcCCCCCCCCCccC
Confidence            4799999  99999999999999997  4                                 134579997  5999999


Q ss_pred             ChHHHHHHHh
Q 015261           78 SSKALAQHLN   87 (410)
Q Consensus        78 s~~~l~~Hl~   87 (410)
                      +...|..|++
T Consensus        49 ~~~~l~~H~~   58 (89)
T 2wbs_A           49 RSDELTRHYR   58 (89)
T ss_dssp             SHHHHHHHHH
T ss_pred             CHHHHHHHHH
Confidence            9999999985

>3uk3_C Zinc finger protein 217; transcription factor, DNA binding, DNA-metal BI protein complex; 2.10A {Homo sapiens}

Probab=98.65  E-value=2.5e-08  Score=71.62  Aligned_cols=53  Identities=17%  Similarity=0.402  Sum_probs=47.1

Q ss_pred             CCcccCCCCCCCCChhHHhhhhhhhhcCCCCCcccccChHHHHHHHHhHhcCCccccccCCCCcccCCHHHHHHHHHhc
Q 015261          181 DPACCFMCDLPHDAIENCMVHMHKCHGFFIPDVEYLKDPKGLLTYLGLKVKRDFMCLYCNDRCHPFNSLEAVRKHMEAK  259 (410)
Q Consensus       181 ~p~~ClfC~~~f~~~~~~~~HM~~~Hgf~ip~~~~lvd~~gLl~yl~~ki~~~~~Cl~C~~~gk~F~s~~alr~HM~~k  259 (410)
                      .|+.|.+|++.|.+...|..||.+|++                       ..++.|..|+   +.|.+...|+.||+..
T Consensus         3 ~~~~C~~C~~~f~~~~~l~~H~~~h~~-----------------------~~~~~C~~C~---~~f~~~~~l~~H~~~h   55 (57)
T 3uk3_C            3 SSRECSYCGKFFRSNYYLNIHLRTHTG-----------------------EKPYKCEFCE---YAAAQKTSLRYHLERH   55 (57)
T ss_dssp             --CBCTTTCCBCSCHHHHHHHHHHHHC-----------------------CCCEECSSSS---CEESSHHHHHHHHHHH
T ss_pred             CCccCCCCcchhCChHHHHHHHHHcCC-----------------------CCCcCCCCCc---chhCCHHHHHHHHHHh
Confidence            578999999999999999999999876                       3479999999   9999999999999864

>2dmi_A Teashirt homolog 3; zinc finger protein 537, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.63  E-value=1e-08  Score=84.39  Aligned_cols=27  Identities=22%  Similarity=0.477  Sum_probs=25.5

Q ss_pred             CCcccCCCCCCCCChhHHhhhhhhhhc
Q 015261          181 DPACCFMCDLPHDAIENCMVHMHKCHG  207 (410)
Q Consensus       181 ~p~~ClfC~~~f~~~~~~~~HM~~~Hg  207 (410)
                      .|+.|.+|++.|.+...|..||.+||.
T Consensus        79 ~~~~C~~C~k~f~~~~~L~~H~~~hh~  105 (115)
T 2dmi_A           79 KVLKCMYCGHSFESLQDLSVHMIKTKH  105 (115)
T ss_dssp             SSCBCSSSCCBCSSHHHHHHHHHHTTT
T ss_pred             cceECCCCCCccCCHHHHHHHHHHhCC
Confidence            679999999999999999999999886

>2j7j_A Transcription factor IIIA; zinc finger module, alternative initiation, nuclear protein, phosphorylation, hydrophobic core, zinc, RNA-binding; 1.65A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1un6_B 2hgh_A

Probab=98.61  E-value=4.7e-08  Score=75.36  Aligned_cols=50  Identities=20%  Similarity=0.254  Sum_probs=44.2

Q ss_pred             CCcccCC--CCCCCCChhHHhhhhhhhhcCCCCCcccccChHHHHHHHHhHhcCCccccc---cCCCCcccCCHHHHHHH
Q 015261          181 DPACCFM--CDLPHDAIENCMVHMHKCHGFFIPDVEYLKDPKGLLTYLGLKVKRDFMCLY---CNDRCHPFNSLEAVRKH  255 (410)
Q Consensus       181 ~p~~Clf--C~~~f~~~~~~~~HM~~~Hgf~ip~~~~lvd~~gLl~yl~~ki~~~~~Cl~---C~~~gk~F~s~~alr~H  255 (410)
                      .|+.|.+  |++.|.+...|..||.+|+|                          +.|..   |+   +.|.+...|+.|
T Consensus        30 ~~~~C~~~~C~~~f~~~~~l~~H~~~h~~--------------------------~~C~~~~~C~---~~f~~~~~l~~H   80 (85)
T 2j7j_A           30 LPYECPHEGCDKRFSLPSRLKRHEKVHAG--------------------------YPCKKDDSCS---FVGKTWTLYLKH   80 (85)
T ss_dssp             CCEECCSTTCCCEESSHHHHHHHHHHHHS--------------------------EECCSCSSCC---CEESSHHHHHHH
T ss_pred             CCeeCCCCCCcCccCCHHHHHHHHHHhCC--------------------------CCCCCCCCCC---CccCCHHHHHHH
Confidence            3578988  99999999999999998764                          68888   99   999999999999


Q ss_pred             HHhc
Q 015261          256 MEAK  259 (410)
Q Consensus       256 M~~k  259 (410)
                      |+..
T Consensus        81 ~~~h   84 (85)
T 2j7j_A           81 VAEC   84 (85)
T ss_dssp             HHHC
T ss_pred             HHhc
Confidence            9864

>1bbo_A Human enhancer-binding protein MBP-1; DNA-binding protein; HET: ABA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 PDB: 3znf_A 4znf_A

Probab=98.59  E-value=3.3e-08  Score=70.95  Aligned_cols=54  Identities=22%  Similarity=0.591  Sum_probs=47.6

Q ss_pred             CCcccccccccCChHHHhhhhhhccccchhhhhhcCCCCCCHHHHHHHHHHHHHhhhcCCCCCcccccCcCCccCChHHH
Q 015261            3 GLTCNSCNREFNDDAEQKLHYKSDWHRYNLKRKVAGVPGVTEALFLARQAALAQEKNKNATPMTYSCGLCGKGYRSSKAL   82 (410)
Q Consensus         3 ~ftC~~C~~~F~~~~~qr~H~ksdwHrYNlKRrva~Lppvs~~~F~~k~~~l~~~~~~~~~~~~~~C~~C~K~f~s~~~l   82 (410)
                      ||.|..|+..|.+...|+.|+++  |                                 .++.+|.|.+|++.|.+...|
T Consensus         1 p~~C~~C~~~f~~~~~l~~H~~~--h---------------------------------~~~~~~~C~~C~~~f~~~~~l   45 (57)
T 1bbo_A            1 KYICEECGIRXKKPSMLKKHIRT--H---------------------------------TDVRPYHCTYCNFSFKTKGNL   45 (57)
T ss_dssp             CCBCTTTCCBCSSHHHHHHHHHH--T---------------------------------SSCCCEECSSSSCEESSHHHH
T ss_pred             CCcCCCCcCcCCCHHHHHHHHHh--c---------------------------------CCCCCccCCCCCchhcCHHHH
Confidence            69999999999999999999998  4                                 134679999999999999999


Q ss_pred             HHHHhhhhh
Q 015261           83 AQHLNSRSH   91 (410)
Q Consensus        83 ~~Hl~skkH   91 (410)
                      ..|+++..+
T Consensus        46 ~~H~~~h~~   54 (57)
T 1bbo_A           46 TKHMKSKAH   54 (57)
T ss_dssp             HHHHHSSSS
T ss_pred             HHHHHHhcc
Confidence            999987544

>2j7j_A Transcription factor IIIA; zinc finger module, alternative initiation, nuclear protein, phosphorylation, hydrophobic core, zinc, RNA-binding; 1.65A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1un6_B 2hgh_A

Probab=98.59  E-value=3e-08  Score=76.50  Aligned_cols=51  Identities=25%  Similarity=0.590  Sum_probs=44.6

Q ss_pred             CCcc--cccccccCChHHHhhhhhhccccchhhhhhcCCCCCCHHHHHHHHHHHHHhhhcCCCCCcccccC--cCCccCC
Q 015261            3 GLTC--NSCNREFNDDAEQKLHYKSDWHRYNLKRKVAGVPGVTEALFLARQAALAQEKNKNATPMTYSCGL--CGKGYRS   78 (410)
Q Consensus         3 ~ftC--~~C~~~F~~~~~qr~H~ksdwHrYNlKRrva~Lppvs~~~F~~k~~~l~~~~~~~~~~~~~~C~~--C~K~f~s   78 (410)
                      ||.|  ..|+..|.+...|+.|+++  |.                                 ++.+|.|.+  |++.|.+
T Consensus         1 p~~C~~~~C~~~f~~~~~l~~H~~~--h~---------------------------------~~~~~~C~~~~C~~~f~~   45 (85)
T 2j7j_A            1 MYVCHFENCGKAFKKHNQLKVHQFS--HT---------------------------------QQLPYECPHEGCDKRFSL   45 (85)
T ss_dssp             CEECCSTTCCCEESSHHHHHHHHHH--HH---------------------------------TTCCEECCSTTCCCEESS
T ss_pred             CccCCCCCCCcccCCHHHHHHHHHH--hC---------------------------------CCCCeeCCCCCCcCccCC
Confidence            6899  9999999999999999988  41                                 246799999  9999999


Q ss_pred             hHHHHHHHhh
Q 015261           79 SKALAQHLNS   88 (410)
Q Consensus        79 ~~~l~~Hl~s   88 (410)
                      ...|..|++.
T Consensus        46 ~~~l~~H~~~   55 (85)
T 2j7j_A           46 PSRLKRHEKV   55 (85)
T ss_dssp             HHHHHHHHHH
T ss_pred             HHHHHHHHHH
Confidence            9999999853

>2dlk_A Novel protein; ZF-C2H2 domain, zinc finger protein 692, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=98.58  E-value=7.4e-08  Score=73.68  Aligned_cols=41  Identities=17%  Similarity=0.370  Sum_probs=35.8

Q ss_pred             CCcccCC--CCCCCCChhHHhhhhhhhhcCCCCCcccccChHHHHHHHHhHhcCCccccccCCCCcccC
Q 015261          181 DPACCFM--CDLPHDAIENCMVHMHKCHGFFIPDVEYLKDPKGLLTYLGLKVKRDFMCLYCNDRCHPFN  247 (410)
Q Consensus       181 ~p~~Clf--C~~~f~~~~~~~~HM~~~Hgf~ip~~~~lvd~~gLl~yl~~ki~~~~~Cl~C~~~gk~F~  247 (410)
                      .|+.|..  |++.|.+...|..||.+|++                       ..++.|..|+   +.|.
T Consensus        37 ~~~~C~~~~C~k~f~~~~~L~~H~~~H~~-----------------------~~~~~C~~C~---k~F~   79 (79)
T 2dlk_A           37 KSFSCPEPACGKSFNFKKHLKEHMKLHSD-----------------------TRDYICEFSG---PSSG   79 (79)
T ss_dssp             CCEECSCTTTCCEESSHHHHHHHHHHHHT-----------------------SCCCSCCSSS---CCCC
T ss_pred             CCeECCCCCCcCccCCHHHHHHHHHHhCC-----------------------CCCeeCCCCC---CCCC
Confidence            4678998  99999999999999999877                       3479999999   8874

>2lv2_A Insulinoma-associated protein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}

Probab=98.53  E-value=9.4e-08  Score=76.32  Aligned_cols=53  Identities=21%  Similarity=0.415  Sum_probs=48.6

Q ss_pred             CCCcccCCCCCCCCChhHHhhhhhhhhcCCCCCcccccChHHHHHHHHhHhcCCccccccCCCCcccCCHHHHHHHHHh
Q 015261          180 FDPACCFMCDLPHDAIENCMVHMHKCHGFFIPDVEYLKDPKGLLTYLGLKVKRDFMCLYCNDRCHPFNSLEAVRKHMEA  258 (410)
Q Consensus       180 i~p~~ClfC~~~f~~~~~~~~HM~~~Hgf~ip~~~~lvd~~gLl~yl~~ki~~~~~Cl~C~~~gk~F~s~~alr~HM~~  258 (410)
                      ..++.|.+|++.|.+...|..||++|+|                       ..+|.|.+|+   +.|.+...|+.||+.
T Consensus        26 ~~~h~C~~Cgk~F~~~~~L~~H~~~H~~-----------------------~k~~~C~~C~---k~F~~~~~L~~H~~~   78 (85)
T 2lv2_A           26 AECHLCPVCGESFASKGAQERHLRLLHA-----------------------AQVFPCKYCP---ATFYSSPGLTRHINK   78 (85)
T ss_dssp             CTTEECTTSCCEESSHHHHHHHHHTTSC-----------------------SSSEECTTSS---CEESSHHHHHHHHHT
T ss_pred             CCCEECCCCCCCcCcHHHHhhhhhhccC-----------------------CCccCCCCCC---CEeCCHHHHHHhCcc
Confidence            4678999999999999999999999887                       3589999999   999999999999974

>2lce_A B-cell lymphoma 6 protein; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}

Probab=98.52  E-value=9.6e-08  Score=72.56  Aligned_cols=54  Identities=20%  Similarity=0.382  Sum_probs=49.0

Q ss_pred             CCCcccCCCCCCCCChhHHhhhhhhhhcCCCCCcccccChHHHHHHHHhHhcCCccccccCCCCcccCCHHHHHHHHHhc
Q 015261          180 FDPACCFMCDLPHDAIENCMVHMHKCHGFFIPDVEYLKDPKGLLTYLGLKVKRDFMCLYCNDRCHPFNSLEAVRKHMEAK  259 (410)
Q Consensus       180 i~p~~ClfC~~~f~~~~~~~~HM~~~Hgf~ip~~~~lvd~~gLl~yl~~ki~~~~~Cl~C~~~gk~F~s~~alr~HM~~k  259 (410)
                      ..++.|..|++.|.+...|..||..|++                       ..++.|..|+   +.|.+...|+.||+.+
T Consensus        15 ~~~~~C~~C~k~f~~~~~l~~H~~~H~~-----------------------~~~~~C~~C~---k~f~~~~~L~~H~~~H   68 (74)
T 2lce_A           15 DKPYKCDRCQASFRYKGNLASHKTVHTG-----------------------EKPYRCNICG---AQFNRPANLKTHTRIH   68 (74)
T ss_dssp             CCSBCCTTSSCCBSCHHHHHHHHHHHCC-----------------------CCSEECTTTC---CEESCHHHHHHHHHHH
T ss_pred             CCCeECCCCCceeCCHHHHHHHHHHcCC-----------------------CCCEECCCCC---chhCCHHHHHHHHHhc
Confidence            3689999999999999999999999876                       2479999999   9999999999999874

>2adr_A ADR1; transcription regulation, zinc finger,; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 g.37.1.1

Probab=98.51  E-value=8.8e-08  Score=69.54  Aligned_cols=51  Identities=18%  Similarity=0.417  Sum_probs=46.4

Q ss_pred             CcccCCCCCCCCChhHHhhhhhhhhcCCCCCcccccChHHHHHHHHhHhcCCccccccCCCCcccCCHHHHHHHHHh
Q 015261          182 PACCFMCDLPHDAIENCMVHMHKCHGFFIPDVEYLKDPKGLLTYLGLKVKRDFMCLYCNDRCHPFNSLEAVRKHMEA  258 (410)
Q Consensus       182 p~~ClfC~~~f~~~~~~~~HM~~~Hgf~ip~~~~lvd~~gLl~yl~~ki~~~~~Cl~C~~~gk~F~s~~alr~HM~~  258 (410)
                      |+.|..|++.|.+...|..||..|++                       ..++.|..|+   +.|.+...|+.||+.
T Consensus         2 ~~~C~~C~~~f~~~~~l~~H~~~h~~-----------------------~~~~~C~~C~---~~f~~~~~l~~H~~~   52 (60)
T 2adr_A            2 SFVCEVCTRAFARQEHLKRHYRSHTN-----------------------EKPYPCGLCN---RAFTRRDLLIRHAQK   52 (60)
T ss_dssp             CBCCTTTCCCBSCHHHHHHHHHTTTS-----------------------SCSEECTTTC---CEESSHHHHHHHHTT
T ss_pred             cCcCCCCccccCCHHHHHHHHHHhCC-----------------------CCCccCCCCC---CccCCHHHHHHHHHH
Confidence            68999999999999999999999776                       2479999999   999999999999863

>1x6e_A Zinc finger protein 24; ZNF24, KOX17, ZNF191, zscan3, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=98.49  E-value=7.6e-08  Score=72.86  Aligned_cols=53  Identities=19%  Similarity=0.441  Sum_probs=48.5

Q ss_pred             CCcccCCCCCCCCChhHHhhhhhhhhcCCCCCcccccChHHHHHHHHhHhcCCccccccCCCCcccCCHHHHHHHHHhc
Q 015261          181 DPACCFMCDLPHDAIENCMVHMHKCHGFFIPDVEYLKDPKGLLTYLGLKVKRDFMCLYCNDRCHPFNSLEAVRKHMEAK  259 (410)
Q Consensus       181 ~p~~ClfC~~~f~~~~~~~~HM~~~Hgf~ip~~~~lvd~~gLl~yl~~ki~~~~~Cl~C~~~gk~F~s~~alr~HM~~k  259 (410)
                      .|+.|.+|++.|.+...|..||..|++                       ..+|.|..|+   +.|.+...|+.||+.+
T Consensus        13 k~~~C~~C~k~f~~~~~L~~H~~~h~~-----------------------~~~~~C~~C~---~~f~~~~~L~~H~~~H   65 (72)
T 1x6e_A           13 KPYGCVECGKAFSRSSILVQHQRVHTG-----------------------EKPYKCLECG---KAFSQNSGLINHQRIH   65 (72)
T ss_dssp             CCEECSSSCCEESSHHHHHHHHHGGGC-----------------------SCCEECSSSC---CEESSHHHHHHHHHHH
T ss_pred             CCccCCCCCCccCCHHHHHHHHHhcCC-----------------------CCCeECCCCC---cccCCHHHHHHHHHhc
Confidence            689999999999999999999999876                       2479999999   9999999999999863

>2lv2_A Insulinoma-associated protein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}

Probab=98.49  E-value=8.1e-08  Score=76.69  Aligned_cols=53  Identities=23%  Similarity=0.495  Sum_probs=47.1

Q ss_pred             CCCcccccccccCChHHHhhhhhhccccchhhhhhcCCCCCCHHHHHHHHHHHHHhhhcCCCCCcccccCcCCccCChHH
Q 015261            2 PGLTCNSCNREFNDDAEQKLHYKSDWHRYNLKRKVAGVPGVTEALFLARQAALAQEKNKNATPMTYSCGLCGKGYRSSKA   81 (410)
Q Consensus         2 ~~ftC~~C~~~F~~~~~qr~H~ksdwHrYNlKRrva~Lppvs~~~F~~k~~~l~~~~~~~~~~~~~~C~~C~K~f~s~~~   81 (410)
                      .+|+|..|+..|.....|+.|+++  |                                 .++++|.|.+|+|.|.....
T Consensus        27 ~~h~C~~Cgk~F~~~~~L~~H~~~--H---------------------------------~~~k~~~C~~C~k~F~~~~~   71 (85)
T 2lv2_A           27 ECHLCPVCGESFASKGAQERHLRL--L---------------------------------HAAQVFPCKYCPATFYSSPG   71 (85)
T ss_dssp             TTEECTTSCCEESSHHHHHHHHHT--T---------------------------------SCSSSEECTTSSCEESSHHH
T ss_pred             CCEECCCCCCCcCcHHHHhhhhhh--c---------------------------------cCCCccCCCCCCCEeCCHHH
Confidence            358999999999999999999998  4                                 24578999999999999999


Q ss_pred             HHHHHhhh
Q 015261           82 LAQHLNSR   89 (410)
Q Consensus        82 l~~Hl~sk   89 (410)
                      |..|++..
T Consensus        72 L~~H~~~~   79 (85)
T 2lv2_A           72 LTRHINKC   79 (85)
T ss_dssp             HHHHHHTT
T ss_pred             HHHhCccc
Confidence            99998653

>1x5w_A Zinc finger protein 64, isoforms 1; ZNF338, nuclear protein, DNA binding, transcription, C2H2 type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=98.48  E-value=1.2e-07  Score=71.32  Aligned_cols=53  Identities=23%  Similarity=0.428  Sum_probs=48.3

Q ss_pred             CCcccCCCCCCCCChhHHhhhhhhhhcCCCCCcccccChHHHHHHHHhHhcCCccccccCCCCcccCCHHHHHHHHHhc
Q 015261          181 DPACCFMCDLPHDAIENCMVHMHKCHGFFIPDVEYLKDPKGLLTYLGLKVKRDFMCLYCNDRCHPFNSLEAVRKHMEAK  259 (410)
Q Consensus       181 ~p~~ClfC~~~f~~~~~~~~HM~~~Hgf~ip~~~~lvd~~gLl~yl~~ki~~~~~Cl~C~~~gk~F~s~~alr~HM~~k  259 (410)
                      .|+.|..|++.|.+...|..||..|++                       ..+|.|..|+   +.|.+...|+.||+..
T Consensus         8 ~~~~C~~C~k~f~~~~~L~~H~~~H~~-----------------------~~~~~C~~C~---~~f~~~~~L~~H~~~h   60 (70)
T 1x5w_A            8 HPEKCSECSYSCSSKAALRIHERIHCT-----------------------DRPFKCNYCS---FDTKQPSNLSKHMKKF   60 (70)
T ss_dssp             CSEECSSSSCEESSHHHHHHHHGGGCC-----------------------SCSEECSSSS---CEESSHHHHHHHHHHH
T ss_pred             CCeECCCCCcccCCHHHHHHHHHHcCC-----------------------CCCEeCCCCC---CccCCHHHHHHHHHHH
Confidence            689999999999999999999999766                       2479999999   9999999999999864

>3uk3_C Zinc finger protein 217; transcription factor, DNA binding, DNA-metal BI protein complex; 2.10A {Homo sapiens}

Probab=98.47  E-value=8.4e-08  Score=68.80  Aligned_cols=52  Identities=21%  Similarity=0.523  Sum_probs=45.4

Q ss_pred             CCCcccccccccCChHHHhhhhhhccccchhhhhhcCCCCCCHHHHHHHHHHHHHhhhcCCCCCcccccCcCCccCChHH
Q 015261            2 PGLTCNSCNREFNDDAEQKLHYKSDWHRYNLKRKVAGVPGVTEALFLARQAALAQEKNKNATPMTYSCGLCGKGYRSSKA   81 (410)
Q Consensus         2 ~~ftC~~C~~~F~~~~~qr~H~ksdwHrYNlKRrva~Lppvs~~~F~~k~~~l~~~~~~~~~~~~~~C~~C~K~f~s~~~   81 (410)
                      .+|.|..|+..|.+...|+.|+++  |                                 .++.+|.|.+|++.|.+...
T Consensus         3 ~~~~C~~C~~~f~~~~~l~~H~~~--h---------------------------------~~~~~~~C~~C~~~f~~~~~   47 (57)
T 3uk3_C            3 SSRECSYCGKFFRSNYYLNIHLRT--H---------------------------------TGEKPYKCEFCEYAAAQKTS   47 (57)
T ss_dssp             --CBCTTTCCBCSCHHHHHHHHHH--H---------------------------------HCCCCEECSSSSCEESSHHH
T ss_pred             CCccCCCCcchhCChHHHHHHHHH--c---------------------------------CCCCCcCCCCCcchhCCHHH
Confidence            479999999999999999999998  4                                 13467999999999999999


Q ss_pred             HHHHHhh
Q 015261           82 LAQHLNS   88 (410)
Q Consensus        82 l~~Hl~s   88 (410)
                      |..|++.
T Consensus        48 l~~H~~~   54 (57)
T 3uk3_C           48 LRYHLER   54 (57)
T ss_dssp             HHHHHHH
T ss_pred             HHHHHHH
Confidence            9999975

>2adr_A ADR1; transcription regulation, zinc finger,; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 g.37.1.1

Probab=98.46  E-value=1.3e-07  Score=68.54  Aligned_cols=51  Identities=31%  Similarity=0.791  Sum_probs=45.6

Q ss_pred             CCcccccccccCChHHHhhhhhhccccchhhhhhcCCCCCCHHHHHHHHHHHHHhhhcCCCCCcccccCcCCccCChHHH
Q 015261            3 GLTCNSCNREFNDDAEQKLHYKSDWHRYNLKRKVAGVPGVTEALFLARQAALAQEKNKNATPMTYSCGLCGKGYRSSKAL   82 (410)
Q Consensus         3 ~ftC~~C~~~F~~~~~qr~H~ksdwHrYNlKRrva~Lppvs~~~F~~k~~~l~~~~~~~~~~~~~~C~~C~K~f~s~~~l   82 (410)
                      +|.|..|+..|.+...|+.|+++  |                                 .++.+|.|.+|++.|.+...|
T Consensus         2 ~~~C~~C~~~f~~~~~l~~H~~~--h---------------------------------~~~~~~~C~~C~~~f~~~~~l   46 (60)
T 2adr_A            2 SFVCEVCTRAFARQEHLKRHYRS--H---------------------------------TNEKPYPCGLCNRAFTRRDLL   46 (60)
T ss_dssp             CBCCTTTCCCBSCHHHHHHHHHT--T---------------------------------TSSCSEECTTTCCEESSHHHH
T ss_pred             cCcCCCCccccCCHHHHHHHHHH--h---------------------------------CCCCCccCCCCCCccCCHHHH
Confidence            79999999999999999999998  4                                 134679999999999999999


Q ss_pred             HHHHhh
Q 015261           83 AQHLNS   88 (410)
Q Consensus        83 ~~Hl~s   88 (410)
                      ..|++.
T Consensus        47 ~~H~~~   52 (60)
T 2adr_A           47 IRHAQK   52 (60)
T ss_dssp             HHHHTT
T ss_pred             HHHHHH
Confidence            999853

>2cot_A Zinc finger protein 435; ADK_LID domain, zinc finger and SCAN domain containing protein 16, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=98.41  E-value=1.9e-07  Score=71.41  Aligned_cols=53  Identities=15%  Similarity=0.281  Sum_probs=48.2

Q ss_pred             CCcccCCCCCCCCChhHHhhhhhhhhcCCCCCcccccChHHHHHHHHhHhcCCccccccCCCCcccCCHHHHHHHHHhc
Q 015261          181 DPACCFMCDLPHDAIENCMVHMHKCHGFFIPDVEYLKDPKGLLTYLGLKVKRDFMCLYCNDRCHPFNSLEAVRKHMEAK  259 (410)
Q Consensus       181 ~p~~ClfC~~~f~~~~~~~~HM~~~Hgf~ip~~~~lvd~~gLl~yl~~ki~~~~~Cl~C~~~gk~F~s~~alr~HM~~k  259 (410)
                      .|+.|..|++.|.+...|..||..|++                       ..+|.|..|+   +.|.+...|+.||+.+
T Consensus        17 ~~~~C~~C~~~f~~~~~l~~H~~~h~~-----------------------~~~~~C~~C~---~~f~~~~~L~~H~~~H   69 (77)
T 2cot_A           17 RRYKCDECGKSFSHSSDLSKHRRTHTG-----------------------EKPYKCDECG---KAFIQRSHLIGHHRVH   69 (77)
T ss_dssp             CSSBCSSSCCBCSCHHHHHHHHTTTCC-----------------------SCSEECSSSC---CEESSHHHHHHHGGGS
T ss_pred             CCEECCCCCcccCCHHHHHHHHHHcCC-----------------------CcCeeCCCCC---CccCCHHHHHHHHHHh
Confidence            689999999999999999999999776                       2479999999   9999999999999753

>1x6h_A Transcriptional repressor CTCF; zinc finger protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=98.41  E-value=1.8e-07  Score=72.39  Aligned_cols=27  Identities=19%  Similarity=0.410  Sum_probs=25.3

Q ss_pred             CCcccCCCCCCCCChhHHhhhhhhhhc
Q 015261          181 DPACCFMCDLPHDAIENCMVHMHKCHG  207 (410)
Q Consensus       181 ~p~~ClfC~~~f~~~~~~~~HM~~~Hg  207 (410)
                      .++.|..|++.|.+...|..||.+||+
T Consensus        46 ~~~~C~~C~~~f~~~~~L~~H~~~h~~   72 (86)
T 1x6h_A           46 AAFVCSKCGKTFTRRNTMARHADNCAG   72 (86)
T ss_dssp             CCEECSSSCCEESCHHHHHHHHHHCCC
T ss_pred             cceECCCCCChhCCHHHHHHHHHHccC
Confidence            468999999999999999999999988

>2drp_A Protein (tramtrack DNA-binding domain); protein-DNA complex, double helix, transcription/DNA complex; HET: DNA; 2.80A {Drosophila melanogaster} SCOP: g.37.1.1 g.37.1.1

Probab=98.39  E-value=1.5e-07  Score=69.62  Aligned_cols=55  Identities=18%  Similarity=0.361  Sum_probs=47.9

Q ss_pred             CCcccCCCCCCCCChhHHhhhhhhhhcCCCCCcccccChHHHHHHHHhHhcCCccccccCCCCcccCCHHHHHHHHHhc
Q 015261          181 DPACCFMCDLPHDAIENCMVHMHKCHGFFIPDVEYLKDPKGLLTYLGLKVKRDFMCLYCNDRCHPFNSLEAVRKHMEAK  259 (410)
Q Consensus       181 ~p~~ClfC~~~f~~~~~~~~HM~~~Hgf~ip~~~~lvd~~gLl~yl~~ki~~~~~Cl~C~~~gk~F~s~~alr~HM~~k  259 (410)
                      .|+.|..|++.|.+...|..||..+|.-                  +   ..++.|..|+   +.|.+...|+.||+..
T Consensus         9 k~~~C~~C~k~f~~~~~l~~H~~~~H~~------------------~---~~~~~C~~C~---k~f~~~~~L~~H~~~~   63 (66)
T 2drp_A            9 HTYRCKVCSRVYTHISNFCRHYVTSHKR------------------N---VKVYPCPFCF---KEFTRKDNMTAHVKII   63 (66)
T ss_dssp             TEEECTTTCCEESSHHHHHHHHHHHSSS------------------S---CCCEECTTTC---CEESCHHHHHHHHHHH
T ss_pred             cceECCCCcchhCCHHHHHHHHHHHcCC------------------C---CcCeECCCCC---CccCCHHHHHHHHHHH
Confidence            6799999999999999999999986620                  0   2479999999   9999999999999864

>1x5w_A Zinc finger protein 64, isoforms 1; ZNF338, nuclear protein, DNA binding, transcription, C2H2 type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=98.39  E-value=2.2e-07  Score=69.73  Aligned_cols=53  Identities=19%  Similarity=0.481  Sum_probs=46.8

Q ss_pred             CCCcccccccccCChHHHhhhhhhccccchhhhhhcCCCCCCHHHHHHHHHHHHHhhhcCCCCCcccccCcCCccCChHH
Q 015261            2 PGLTCNSCNREFNDDAEQKLHYKSDWHRYNLKRKVAGVPGVTEALFLARQAALAQEKNKNATPMTYSCGLCGKGYRSSKA   81 (410)
Q Consensus         2 ~~ftC~~C~~~F~~~~~qr~H~ksdwHrYNlKRrva~Lppvs~~~F~~k~~~l~~~~~~~~~~~~~~C~~C~K~f~s~~~   81 (410)
                      .+|.|..|+..|.+...|+.|+++  |                                 .++.+|.|.+|++.|.....
T Consensus         8 ~~~~C~~C~k~f~~~~~L~~H~~~--H---------------------------------~~~~~~~C~~C~~~f~~~~~   52 (70)
T 1x5w_A            8 HPEKCSECSYSCSSKAALRIHERI--H---------------------------------CTDRPFKCNYCSFDTKQPSN   52 (70)
T ss_dssp             CSEECSSSSCEESSHHHHHHHHGG--G---------------------------------CCSCSEECSSSSCEESSHHH
T ss_pred             CCeECCCCCcccCCHHHHHHHHHH--c---------------------------------CCCCCEeCCCCCCccCCHHH
Confidence            479999999999999999999998  4                                 13467999999999999999


Q ss_pred             HHHHHhhh
Q 015261           82 LAQHLNSR   89 (410)
Q Consensus        82 l~~Hl~sk   89 (410)
                      |..|++..
T Consensus        53 L~~H~~~h   60 (70)
T 1x5w_A           53 LSKHMKKF   60 (70)
T ss_dssp             HHHHHHHH
T ss_pred             HHHHHHHH
Confidence            99999753

>2lce_A B-cell lymphoma 6 protein; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}

Probab=98.38  E-value=2.2e-07  Score=70.55  Aligned_cols=52  Identities=21%  Similarity=0.532  Sum_probs=46.5

Q ss_pred             CCCcccccccccCChHHHhhhhhhccccchhhhhhcCCCCCCHHHHHHHHHHHHHhhhcCCCCCcccccCcCCccCChHH
Q 015261            2 PGLTCNSCNREFNDDAEQKLHYKSDWHRYNLKRKVAGVPGVTEALFLARQAALAQEKNKNATPMTYSCGLCGKGYRSSKA   81 (410)
Q Consensus         2 ~~ftC~~C~~~F~~~~~qr~H~ksdwHrYNlKRrva~Lppvs~~~F~~k~~~l~~~~~~~~~~~~~~C~~C~K~f~s~~~   81 (410)
                      .+|.|..|+..|.....|+.|+++  |                                 .++++|.|.+|+|.|.+...
T Consensus        16 ~~~~C~~C~k~f~~~~~l~~H~~~--H---------------------------------~~~~~~~C~~C~k~f~~~~~   60 (74)
T 2lce_A           16 KPYKCDRCQASFRYKGNLASHKTV--H---------------------------------TGEKPYRCNICGAQFNRPAN   60 (74)
T ss_dssp             CSBCCTTSSCCBSCHHHHHHHHHH--H---------------------------------CCCCSEECTTTCCEESCHHH
T ss_pred             CCeECCCCCceeCCHHHHHHHHHH--c---------------------------------CCCCCEECCCCCchhCCHHH
Confidence            479999999999999999999998  4                                 13467999999999999999


Q ss_pred             HHHHHhh
Q 015261           82 LAQHLNS   88 (410)
Q Consensus        82 l~~Hl~s   88 (410)
                      |..|++.
T Consensus        61 L~~H~~~   67 (74)
T 2lce_A           61 LKTHTRI   67 (74)
T ss_dssp             HHHHHHH
T ss_pred             HHHHHHh
Confidence            9999975

>1x6e_A Zinc finger protein 24; ZNF24, KOX17, ZNF191, zscan3, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=98.37  E-value=2.3e-07  Score=70.17  Aligned_cols=52  Identities=23%  Similarity=0.510  Sum_probs=46.4

Q ss_pred             CCCcccccccccCChHHHhhhhhhccccchhhhhhcCCCCCCHHHHHHHHHHHHHhhhcCCCCCcccccCcCCccCChHH
Q 015261            2 PGLTCNSCNREFNDDAEQKLHYKSDWHRYNLKRKVAGVPGVTEALFLARQAALAQEKNKNATPMTYSCGLCGKGYRSSKA   81 (410)
Q Consensus         2 ~~ftC~~C~~~F~~~~~qr~H~ksdwHrYNlKRrva~Lppvs~~~F~~k~~~l~~~~~~~~~~~~~~C~~C~K~f~s~~~   81 (410)
                      .+|.|..|+..|.....|+.|+++  |                                 .++.+|.|.+|++.|.+...
T Consensus        13 k~~~C~~C~k~f~~~~~L~~H~~~--h---------------------------------~~~~~~~C~~C~~~f~~~~~   57 (72)
T 1x6e_A           13 KPYGCVECGKAFSRSSILVQHQRV--H---------------------------------TGEKPYKCLECGKAFSQNSG   57 (72)
T ss_dssp             CCEECSSSCCEESSHHHHHHHHHG--G---------------------------------GCSCCEECSSSCCEESSHHH
T ss_pred             CCccCCCCCCccCCHHHHHHHHHh--c---------------------------------CCCCCeECCCCCcccCCHHH
Confidence            479999999999999999999998  4                                 13467999999999999999


Q ss_pred             HHHHHhh
Q 015261           82 LAQHLNS   88 (410)
Q Consensus        82 l~~Hl~s   88 (410)
                      |..|++.
T Consensus        58 L~~H~~~   64 (72)
T 1x6e_A           58 LINHQRI   64 (72)
T ss_dssp             HHHHHHH
T ss_pred             HHHHHHh
Confidence            9999975

>2wbt_A B-129; zinc finger; 2.70A {Sulfolobus virus 1}

Probab=98.36  E-value=1.7e-07  Score=78.65  Aligned_cols=27  Identities=19%  Similarity=0.456  Sum_probs=24.9

Q ss_pred             CcccCCCCCCCCChhHHhhhhhhhhcC
Q 015261          182 PACCFMCDLPHDAIENCMVHMHKCHGF  208 (410)
Q Consensus       182 p~~ClfC~~~f~~~~~~~~HM~~~Hgf  208 (410)
                      |+.|.+|++.|.+...|..||.+|||-
T Consensus       100 ~~~C~~C~k~f~~~~~l~~H~~~h~~~  126 (129)
T 2wbt_A          100 TKVCPVCKKEFTSTDSALDHVCKKHNI  126 (129)
T ss_dssp             CCBCTTTCCBCSSHHHHHHHHHHTTCC
T ss_pred             CCCCCCCCcccCCHHHHHHHHHHHCCc
Confidence            468999999999999999999999984

>2drp_A Protein (tramtrack DNA-binding domain); protein-DNA complex, double helix, transcription/DNA complex; HET: DNA; 2.80A {Drosophila melanogaster} SCOP: g.37.1.1 g.37.1.1

Probab=98.36  E-value=2.2e-07  Score=68.73  Aligned_cols=55  Identities=20%  Similarity=0.495  Sum_probs=47.5

Q ss_pred             CCCcccccccccCChHHHhhhhhhccccchhhhhhcCCCCCCHHHHHHHHHHHHHhhhcCCCCCcccccCcCCccCChHH
Q 015261            2 PGLTCNSCNREFNDDAEQKLHYKSDWHRYNLKRKVAGVPGVTEALFLARQAALAQEKNKNATPMTYSCGLCGKGYRSSKA   81 (410)
Q Consensus         2 ~~ftC~~C~~~F~~~~~qr~H~ksdwHrYNlKRrva~Lppvs~~~F~~k~~~l~~~~~~~~~~~~~~C~~C~K~f~s~~~   81 (410)
                      .+|.|..|+..|.+...|+.|+++. |.                                .++.+|.|.+|+|.|.+...
T Consensus         9 k~~~C~~C~k~f~~~~~l~~H~~~~-H~--------------------------------~~~~~~~C~~C~k~f~~~~~   55 (66)
T 2drp_A            9 HTYRCKVCSRVYTHISNFCRHYVTS-HK--------------------------------RNVKVYPCPFCFKEFTRKDN   55 (66)
T ss_dssp             TEEECTTTCCEESSHHHHHHHHHHH-SS--------------------------------SSCCCEECTTTCCEESCHHH
T ss_pred             cceECCCCcchhCCHHHHHHHHHHH-cC--------------------------------CCCcCeECCCCCCccCCHHH
Confidence            4699999999999999999999984 20                                13568999999999999999


Q ss_pred             HHHHHhhh
Q 015261           82 LAQHLNSR   89 (410)
Q Consensus        82 l~~Hl~sk   89 (410)
                      |..|++..
T Consensus        56 L~~H~~~~   63 (66)
T 2drp_A           56 MTAHVKII   63 (66)
T ss_dssp             HHHHHHHH
T ss_pred             HHHHHHHH
Confidence            99999864

>2d9h_A Zinc finger protein 692; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.34  E-value=3.5e-07  Score=70.02  Aligned_cols=57  Identities=18%  Similarity=0.332  Sum_probs=49.1

Q ss_pred             CCcccCCCCCCCCChhHHhhhhhhhhcCCCCCcccccChHHHHHHHHhHhcCCccccccCCCCcccCCHHHHHHHHHhcC
Q 015261          181 DPACCFMCDLPHDAIENCMVHMHKCHGFFIPDVEYLKDPKGLLTYLGLKVKRDFMCLYCNDRCHPFNSLEAVRKHMEAKR  260 (410)
Q Consensus       181 ~p~~ClfC~~~f~~~~~~~~HM~~~Hgf~ip~~~~lvd~~gLl~yl~~ki~~~~~Cl~C~~~gk~F~s~~alr~HM~~k~  260 (410)
                      .|+.|.+|++.|.+...|..||..|++                    .....+|.|..|+   +.|.+...|+.||+...
T Consensus         6 k~~~C~~C~k~f~~~~~L~~H~~~h~~--------------------~~~~~~~~C~~C~---k~f~~~~~L~~H~~~~H   62 (78)
T 2d9h_A            6 SGLQCEICGFTCRQKASLNWHQRKHAE--------------------TVAALRFPCEFCG---KRFEKPDSVAAHRSKSH   62 (78)
T ss_dssp             CCEECSSSCCEESSHHHHHHHHHHHHH--------------------HTTTCCEECTTTC---CEESSHHHHHHHHHHTS
T ss_pred             cCeECCCCCCeeCCHHHHHHHHHHhhc--------------------cCCCcccCCCCCC---chhCCHHHHHHHHHHhC
Confidence            689999999999999999999999875                    1112479999999   99999999999997543

>2gqj_A Zinc finger protein KIAA1196; ZF-C2H2 like domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.33  E-value=4.1e-07  Score=73.31  Aligned_cols=54  Identities=22%  Similarity=0.434  Sum_probs=48.0

Q ss_pred             CCcccCCCCCCCC-ChhHHhhhhhhhhcCCCCCcccccChHHHHHHHHhHhcCCccccccCCCCcccCCHHHHHHHHHhc
Q 015261          181 DPACCFMCDLPHD-AIENCMVHMHKCHGFFIPDVEYLKDPKGLLTYLGLKVKRDFMCLYCNDRCHPFNSLEAVRKHMEAK  259 (410)
Q Consensus       181 ~p~~ClfC~~~f~-~~~~~~~HM~~~Hgf~ip~~~~lvd~~gLl~yl~~ki~~~~~Cl~C~~~gk~F~s~~alr~HM~~k  259 (410)
                      .++.|.+|++.|. +...|..||.+||+                   .++   +|.|..|+   +.|.+...|+.||+.+
T Consensus        23 ~~~~C~~C~k~f~~~~~~L~~H~~~h~~-------------------~~~---~~~C~~C~---k~F~~~~~L~~H~~~h   77 (98)
T 2gqj_A           23 GEAVCPTCNVVTRKTLVGLKKHMEVCQK-------------------LQD---ALKCQHCR---KQFKSKAGLNYHTMAE   77 (98)
T ss_dssp             SCCCCTTTCCCCSSCSHHHHHHHHHHHH-------------------HHH---HHSCSSSC---CCCSCHHHHHHHHHHH
T ss_pred             CCcCCCCCCCChhhhHHHHHHHHHHHcC-------------------CCC---CEECCCCC---CccCCHHHHHHHHHHH
Confidence            6899999999999 99999999999875                   122   68999999   9999999999999865

>2ct1_A Transcriptional repressor CTCF; CCCTC-BINDING factor, zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=98.31  E-value=4e-07  Score=69.59  Aligned_cols=56  Identities=16%  Similarity=0.374  Sum_probs=48.4

Q ss_pred             CCcccCCCCCCCCChhHHhhhhhhhhcCCCCCcccccChHHHHHHHHhHhcCCccccccCCCCcccCCHHHHHHHHHhcC
Q 015261          181 DPACCFMCDLPHDAIENCMVHMHKCHGFFIPDVEYLKDPKGLLTYLGLKVKRDFMCLYCNDRCHPFNSLEAVRKHMEAKR  260 (410)
Q Consensus       181 ~p~~ClfC~~~f~~~~~~~~HM~~~Hgf~ip~~~~lvd~~gLl~yl~~ki~~~~~Cl~C~~~gk~F~s~~alr~HM~~k~  260 (410)
                      .|+.|.+|++.|.+...|..||..+|.-.                     ..+|.|..|+   +.|.+...|+.||+...
T Consensus        14 k~~~C~~C~k~f~~~~~L~~H~~~~h~~~---------------------~~~~~C~~C~---~~f~~~~~L~~H~~~~H   69 (77)
T 2ct1_A           14 KPYECYICHARFTQSGTMKMHILQKHTEN---------------------VAKFHCPHCD---TVIARKSDLGVHLRKQH   69 (77)
T ss_dssp             CSEECTTTCCEESCHHHHHHHHHHHSSSS---------------------CSSEECSSSS---CEESSHHHHHHHHHHTS
T ss_pred             CCeECCCcCchhCCHHHHHHHHHHhcCCC---------------------CCccCCCCCC---CccCCHHHHHHHHHHhC
Confidence            68999999999999999999998666510                     1378999999   99999999999999753

>2cot_A Zinc finger protein 435; ADK_LID domain, zinc finger and SCAN domain containing protein 16, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=98.31  E-value=5.3e-07  Score=68.91  Aligned_cols=52  Identities=23%  Similarity=0.604  Sum_probs=46.3

Q ss_pred             CCCcccccccccCChHHHhhhhhhccccchhhhhhcCCCCCCHHHHHHHHHHHHHhhhcCCCCCcccccCcCCccCChHH
Q 015261            2 PGLTCNSCNREFNDDAEQKLHYKSDWHRYNLKRKVAGVPGVTEALFLARQAALAQEKNKNATPMTYSCGLCGKGYRSSKA   81 (410)
Q Consensus         2 ~~ftC~~C~~~F~~~~~qr~H~ksdwHrYNlKRrva~Lppvs~~~F~~k~~~l~~~~~~~~~~~~~~C~~C~K~f~s~~~   81 (410)
                      .+|.|..|+..|.....|+.|+++  |                                 .++.+|.|.+|++.|.....
T Consensus        17 ~~~~C~~C~~~f~~~~~l~~H~~~--h---------------------------------~~~~~~~C~~C~~~f~~~~~   61 (77)
T 2cot_A           17 RRYKCDECGKSFSHSSDLSKHRRT--H---------------------------------TGEKPYKCDECGKAFIQRSH   61 (77)
T ss_dssp             CSSBCSSSCCBCSCHHHHHHHHTT--T---------------------------------CCSCSEECSSSCCEESSHHH
T ss_pred             CCEECCCCCcccCCHHHHHHHHHH--c---------------------------------CCCcCeeCCCCCCccCCHHH
Confidence            479999999999999999999998  4                                 13467999999999999999


Q ss_pred             HHHHHhh
Q 015261           82 LAQHLNS   88 (410)
Q Consensus        82 l~~Hl~s   88 (410)
                      |..|++.
T Consensus        62 L~~H~~~   68 (77)
T 2cot_A           62 LIGHHRV   68 (77)
T ss_dssp             HHHHGGG
T ss_pred             HHHHHHH
Confidence            9999964

>2ctd_A Zinc finger protein 512; zinc binding, two ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=98.31  E-value=5.6e-07  Score=72.89  Aligned_cols=58  Identities=28%  Similarity=0.565  Sum_probs=50.2

Q ss_pred             CCcccCCCCCCC-CChhHHhhhhhhhhcCCCCCcccccChHHHHHHHHhHhcCCccccccCCCCcccCCHHHHHHH-HHh
Q 015261          181 DPACCFMCDLPH-DAIENCMVHMHKCHGFFIPDVEYLKDPKGLLTYLGLKVKRDFMCLYCNDRCHPFNSLEAVRKH-MEA  258 (410)
Q Consensus       181 ~p~~ClfC~~~f-~~~~~~~~HM~~~Hgf~ip~~~~lvd~~gLl~yl~~ki~~~~~Cl~C~~~gk~F~s~~alr~H-M~~  258 (410)
                      .++.|..|++.| .+...|..||++| +                       ..+|.|..|+   +.|.+...|+.| |+.
T Consensus        33 ~~~~C~~C~k~F~~~~~~L~~H~~~h-~-----------------------~k~~~C~~Cg---k~F~~~~~L~~H~~~~   85 (96)
T 2ctd_A           33 GSVSCPTCQAVGRKTIEGLKKHMENC-K-----------------------QEMFTCHHCG---KQLRSLAGMKYHVMAN   85 (96)
T ss_dssp             SCEECTTTCSCEESSHHHHHHHHHHH-C-----------------------CCCCCCSSSC---CCCSSHHHHHHHHHHH
T ss_pred             CCcCCCCCCCCcccCHHHHHHHHHHH-C-----------------------CCCeECCCCC---CeeCCHHHHHHHhHHh
Confidence            578999999999 9999999999987 7                       3479999999   999999999999 765


Q ss_pred             cCCcccCCC
Q 015261          259 KRHCKIHFG  267 (410)
Q Consensus       259 k~HCki~ye  267 (410)
                        |...||-
T Consensus        86 --H~~~p~~   92 (96)
T 2ctd_A           86 --HNSLPSG   92 (96)
T ss_dssp             --TCCCSSC
T ss_pred             --cCCCCCC
Confidence              4455553

>2d9h_A Zinc finger protein 692; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.28  E-value=8.7e-07  Score=67.75  Aligned_cols=32  Identities=16%  Similarity=0.229  Sum_probs=27.8

Q ss_pred             CCcccCCCCCCCCChhHHhhhhhhhhcCCCCC
Q 015261          181 DPACCFMCDLPHDAIENCMVHMHKCHGFFIPD  212 (410)
Q Consensus       181 ~p~~ClfC~~~f~~~~~~~~HM~~~Hgf~ip~  212 (410)
                      .++.|.+|++.|.+...|..||..+|....|.
T Consensus        37 ~~~~C~~C~k~f~~~~~L~~H~~~~H~~~~~~   68 (78)
T 2d9h_A           37 LRFPCEFCGKRFEKPDSVAAHRSKSHPALLLA   68 (78)
T ss_dssp             CCEECTTTCCEESSHHHHHHHHHHTSTTTSSC
T ss_pred             cccCCCCCCchhCCHHHHHHHHHHhCCCCCCC
Confidence            46899999999999999999998889865554

>1llm_C Chimera of ZIF23-GCN4; dimerization, DNA recognition, leucine zipper, X-RAY crystallography, structure-based design, zinc fingers; 1.50A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 PDB: 1xf7_A

Probab=98.28  E-value=4.6e-07  Score=71.07  Aligned_cols=54  Identities=19%  Similarity=0.498  Sum_probs=48.9

Q ss_pred             CCcccCCCCCCCCChhHHhhhhhhhhcCCCCCcccccChHHHHHHHHhHhcCCccccccCCCCcccCCHHHHHHHHHhcC
Q 015261          181 DPACCFMCDLPHDAIENCMVHMHKCHGFFIPDVEYLKDPKGLLTYLGLKVKRDFMCLYCNDRCHPFNSLEAVRKHMEAKR  260 (410)
Q Consensus       181 ~p~~ClfC~~~f~~~~~~~~HM~~~Hgf~ip~~~~lvd~~gLl~yl~~ki~~~~~Cl~C~~~gk~F~s~~alr~HM~~k~  260 (410)
                      .|+.|..|++.|.+...|..||..|+|                       ..++.|..|+   +.|.+...|+.||+...
T Consensus         2 k~~~C~~C~k~f~~~~~L~~H~~~H~~-----------------------~~~~~C~~C~---k~f~~~~~L~~H~~~h~   55 (88)
T 1llm_C            2 KPFQCRICMRNFSRSDHLTTHIRTHTG-----------------------EKPFACDICG---RKFARSDERKRHRDIQH   55 (88)
T ss_dssp             CCEECTTTCCEESCHHHHHHHHHHHHC-----------------------CCCEECTTTC---CEESSHHHHHHHHHHHT
T ss_pred             CCCcCCCCCCccCCHHHHHHHHHHcCC-----------------------CCCccCCCCC---CccCCHHHHHHHHHHhC
Confidence            578999999999999999999999876                       2479999999   99999999999998753

>2ct1_A Transcriptional repressor CTCF; CCCTC-BINDING factor, zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=98.26  E-value=5.9e-07  Score=68.66  Aligned_cols=56  Identities=20%  Similarity=0.447  Sum_probs=47.1

Q ss_pred             CCCcccccccccCChHHHhhhhhhccccchhhhhhcCCCCCCHHHHHHHHHHHHHhhhcCCCCCcccccCcCCccCChHH
Q 015261            2 PGLTCNSCNREFNDDAEQKLHYKSDWHRYNLKRKVAGVPGVTEALFLARQAALAQEKNKNATPMTYSCGLCGKGYRSSKA   81 (410)
Q Consensus         2 ~~ftC~~C~~~F~~~~~qr~H~ksdwHrYNlKRrva~Lppvs~~~F~~k~~~l~~~~~~~~~~~~~~C~~C~K~f~s~~~   81 (410)
                      .+|.|..|+..|.....|+.|++.. |.                                ....+|.|.+|++.|.+...
T Consensus        14 k~~~C~~C~k~f~~~~~L~~H~~~~-h~--------------------------------~~~~~~~C~~C~~~f~~~~~   60 (77)
T 2ct1_A           14 KPYECYICHARFTQSGTMKMHILQK-HT--------------------------------ENVAKFHCPHCDTVIARKSD   60 (77)
T ss_dssp             CSEECTTTCCEESCHHHHHHHHHHH-SS--------------------------------SSCSSEECSSSSCEESSHHH
T ss_pred             CCeECCCcCchhCCHHHHHHHHHHh-cC--------------------------------CCCCccCCCCCCCccCCHHH
Confidence            4799999999999999999999853 30                                11357999999999999999


Q ss_pred             HHHHHhhhh
Q 015261           82 LAQHLNSRS   90 (410)
Q Consensus        82 l~~Hl~skk   90 (410)
                      |..|++...
T Consensus        61 L~~H~~~~H   69 (77)
T 2ct1_A           61 LGVHLRKQH   69 (77)
T ss_dssp             HHHHHHHTS
T ss_pred             HHHHHHHhC
Confidence            999997644

>1f2i_G Fusion of N-terminal 17-MER peptide extension to ZIF12; zinc finger, dimer, protein-DNA complex, cooperativity, transcription/DNA complex; 2.35A {Mus musculus} SCOP: g.37.1.1 g.37.1.1

Probab=98.23  E-value=6.5e-07  Score=67.46  Aligned_cols=53  Identities=21%  Similarity=0.535  Sum_probs=47.6

Q ss_pred             CCCcccCC--CCCCCCChhHHhhhhhhhhcCCCCCcccccChHHHHHHHHhHhcCCccccccCCCCcccCCHHHHHHHHH
Q 015261          180 FDPACCFM--CDLPHDAIENCMVHMHKCHGFFIPDVEYLKDPKGLLTYLGLKVKRDFMCLYCNDRCHPFNSLEAVRKHME  257 (410)
Q Consensus       180 i~p~~Clf--C~~~f~~~~~~~~HM~~~Hgf~ip~~~~lvd~~gLl~yl~~ki~~~~~Cl~C~~~gk~F~s~~alr~HM~  257 (410)
                      ..++.|.+  |++.|.+...|..||..|++                       ..+|.|..|+   +.|.+...|+.||+
T Consensus        17 ~~~~~C~~~~C~k~f~~~~~l~~H~~~h~~-----------------------~~~~~C~~C~---~~f~~~~~l~~H~~   70 (73)
T 1f2i_G           17 MRPYACPVESCDRRFSRSDELTRHIRIHTG-----------------------QKPFQCRICM---RNFSRSDHLTTHIR   70 (73)
T ss_dssp             CCCEECSSTTBCCEESSHHHHHHHHHHHHC-----------------------CCCEECTTTC---CEESCHHHHHHHHT
T ss_pred             CCccCCcCCCCCCccCCHHHHHHHHHhhCC-----------------------CCCeECCCCC---chhCCHHHHHHHHH
Confidence            46899985  99999999999999999876                       3479999999   99999999999997


Q ss_pred             h
Q 015261          258 A  258 (410)
Q Consensus       258 ~  258 (410)
                      .
T Consensus        71 ~   71 (73)
T 1f2i_G           71 T   71 (73)
T ss_dssp             T
T ss_pred             h
Confidence            5

>1x6h_A Transcriptional repressor CTCF; zinc finger protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=98.22  E-value=8.6e-07  Score=68.51  Aligned_cols=58  Identities=21%  Similarity=0.442  Sum_probs=49.5

Q ss_pred             CCcccCCCCCCCCChhHHhhhhhhhhcCCCCCcccccChHHHHHHHHhHhcCCccccccCCCCcccCCHHHHHHHHHhcC
Q 015261          181 DPACCFMCDLPHDAIENCMVHMHKCHGFFIPDVEYLKDPKGLLTYLGLKVKRDFMCLYCNDRCHPFNSLEAVRKHMEAKR  260 (410)
Q Consensus       181 ~p~~ClfC~~~f~~~~~~~~HM~~~Hgf~ip~~~~lvd~~gLl~yl~~ki~~~~~Cl~C~~~gk~F~s~~alr~HM~~k~  260 (410)
                      .|+.|.+|++.|.+...|..||..+|+-..                   ...++.|..|+   +.|.+...|+.||+...
T Consensus        14 k~~~C~~C~~~f~~~~~l~~H~~~~~~~~~-------------------~~~~~~C~~C~---~~f~~~~~L~~H~~~h~   71 (86)
T 1x6h_A           14 KPYACSHCDKTFRQKQLLDMHFKRYHDPNF-------------------VPAAFVCSKCG---KTFTRRNTMARHADNCA   71 (86)
T ss_dssp             CCEECSSSSCEESSHHHHHHHHHHTTCSSC-------------------CCCCEECSSSC---CEESCHHHHHHHHHHCC
T ss_pred             CCCcCCCCCCccCCHHHHHHHHHHhcCCcC-------------------CCcceECCCCC---ChhCCHHHHHHHHHHcc
Confidence            689999999999999999999999887211                   01368999999   99999999999998753

>2gqj_A Zinc finger protein KIAA1196; ZF-C2H2 like domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.20  E-value=4e-07  Score=73.44  Aligned_cols=54  Identities=20%  Similarity=0.320  Sum_probs=45.9

Q ss_pred             CCCcccccccccC-ChHHHhhhhhhccccchhhhhhcCCCCCCHHHHHHHHHHHHHhhhcCCCCCcccccCcCCccCChH
Q 015261            2 PGLTCNSCNREFN-DDAEQKLHYKSDWHRYNLKRKVAGVPGVTEALFLARQAALAQEKNKNATPMTYSCGLCGKGYRSSK   80 (410)
Q Consensus         2 ~~ftC~~C~~~F~-~~~~qr~H~ksdwHrYNlKRrva~Lppvs~~~F~~k~~~l~~~~~~~~~~~~~~C~~C~K~f~s~~   80 (410)
                      .+|.|..|+..|. ....|+.|+++  |.        +                        .+++|.|.+|+|.|.+..
T Consensus        23 ~~~~C~~C~k~f~~~~~~L~~H~~~--h~--------~------------------------~~~~~~C~~C~k~F~~~~   68 (98)
T 2gqj_A           23 GEAVCPTCNVVTRKTLVGLKKHMEV--CQ--------K------------------------LQDALKCQHCRKQFKSKA   68 (98)
T ss_dssp             SCCCCTTTCCCCSSCSHHHHHHHHH--HH--------H------------------------HHHHHSCSSSCCCCSCHH
T ss_pred             CCcCCCCCCCChhhhHHHHHHHHHH--Hc--------C------------------------CCCCEECCCCCCccCCHH
Confidence            4799999999999 99999999998  41        0                        024789999999999999


Q ss_pred             HHHHHHhhh
Q 015261           81 ALAQHLNSR   89 (410)
Q Consensus        81 ~l~~Hl~sk   89 (410)
                      .|..|++..
T Consensus        69 ~L~~H~~~h   77 (98)
T 2gqj_A           69 GLNYHTMAE   77 (98)
T ss_dssp             HHHHHHHHH
T ss_pred             HHHHHHHHH
Confidence            999999753

>2ctd_A Zinc finger protein 512; zinc binding, two ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=98.18  E-value=9.5e-07  Score=71.53  Aligned_cols=50  Identities=22%  Similarity=0.451  Sum_probs=44.3

Q ss_pred             CCCccccccccc-CChHHHhhhhhhccccchhhhhhcCCCCCCHHHHHHHHHHHHHhhhcCCCCCcccccCcCCccCChH
Q 015261            2 PGLTCNSCNREF-NDDAEQKLHYKSDWHRYNLKRKVAGVPGVTEALFLARQAALAQEKNKNATPMTYSCGLCGKGYRSSK   80 (410)
Q Consensus         2 ~~ftC~~C~~~F-~~~~~qr~H~ksdwHrYNlKRrva~Lppvs~~~F~~k~~~l~~~~~~~~~~~~~~C~~C~K~f~s~~   80 (410)
                      .+|.|..|+..| .+...|+.|+++  |                                  ++++|.|.+|+|.|....
T Consensus        33 ~~~~C~~C~k~F~~~~~~L~~H~~~--h----------------------------------~~k~~~C~~Cgk~F~~~~   76 (96)
T 2ctd_A           33 GSVSCPTCQAVGRKTIEGLKKHMEN--C----------------------------------KQEMFTCHHCGKQLRSLA   76 (96)
T ss_dssp             SCEECTTTCSCEESSHHHHHHHHHH--H----------------------------------CCCCCCCSSSCCCCSSHH
T ss_pred             CCcCCCCCCCCcccCHHHHHHHHHH--H----------------------------------CCCCeECCCCCCeeCCHH
Confidence            479999999999 999999999997  3                                  235799999999999999


Q ss_pred             HHHHH-Hh
Q 015261           81 ALAQH-LN   87 (410)
Q Consensus        81 ~l~~H-l~   87 (410)
                      .|..| ++
T Consensus        77 ~L~~H~~~   84 (96)
T 2ctd_A           77 GMKYHVMA   84 (96)
T ss_dssp             HHHHHHHH
T ss_pred             HHHHHhHH
Confidence            99999 54

>2epa_A Krueppel-like factor 10; transforming growth factor-beta-inducible early growth response protein 1, TGFB-inducible early growth response protein 1; NMR {Homo sapiens}

Probab=98.09  E-value=1.8e-06  Score=64.89  Aligned_cols=54  Identities=17%  Similarity=0.424  Sum_probs=47.8

Q ss_pred             CCCCcccCC--CCCCCCChhHHhhhhhhhhcCCCCCcccccChHHHHHHHHhHhcCCccccc--cCCCCcccCCHHHHHH
Q 015261          179 EFDPACCFM--CDLPHDAIENCMVHMHKCHGFFIPDVEYLKDPKGLLTYLGLKVKRDFMCLY--CNDRCHPFNSLEAVRK  254 (410)
Q Consensus       179 ~i~p~~Clf--C~~~f~~~~~~~~HM~~~Hgf~ip~~~~lvd~~gLl~yl~~ki~~~~~Cl~--C~~~gk~F~s~~alr~  254 (410)
                      .+.++.|.+  |++.|.....|..||..|++                       ..+|.|.+  |+   +.|.+...|+.
T Consensus        14 ~~~~~~C~~~~C~k~f~~~~~L~~H~~~H~~-----------------------~~~~~C~~~~C~---k~f~~~~~l~~   67 (72)
T 2epa_A           14 RIRSHICSHPGCGKTYFKSSHLKAHTRTHTG-----------------------EKPFSCSWKGCE---RRFARSDELSR   67 (72)
T ss_dssp             CCCCEECSSTTTCCEESSHHHHHHHHHHHSS-----------------------SCSEECCCTTCC---CEESSHHHHHH
T ss_pred             ccCceeCCCCCCccccCCHHHHHHHHHhcCC-----------------------CCCccCCCCCCC---cccCCHHHHHh
Confidence            357899999  99999999999999999776                       34799976  99   99999999999


Q ss_pred             HHHh
Q 015261          255 HMEA  258 (410)
Q Consensus       255 HM~~  258 (410)
                      ||+.
T Consensus        68 H~~~   71 (72)
T 2epa_A           68 HRRT   71 (72)
T ss_dssp             HTTT
T ss_pred             Hhhc
Confidence            9964

>1f2i_G Fusion of N-terminal 17-MER peptide extension to ZIF12; zinc finger, dimer, protein-DNA complex, cooperativity, transcription/DNA complex; 2.35A {Mus musculus} SCOP: g.37.1.1 g.37.1.1

Probab=98.09  E-value=1.7e-06  Score=65.17  Aligned_cols=52  Identities=25%  Similarity=0.636  Sum_probs=45.5

Q ss_pred             CCCccc--ccccccCChHHHhhhhhhccccchhhhhhcCCCCCCHHHHHHHHHHHHHhhhcCCCCCcccccCcCCccCCh
Q 015261            2 PGLTCN--SCNREFNDDAEQKLHYKSDWHRYNLKRKVAGVPGVTEALFLARQAALAQEKNKNATPMTYSCGLCGKGYRSS   79 (410)
Q Consensus         2 ~~ftC~--~C~~~F~~~~~qr~H~ksdwHrYNlKRrva~Lppvs~~~F~~k~~~l~~~~~~~~~~~~~~C~~C~K~f~s~   79 (410)
                      .+|.|.  .|+..|.....|+.|+++  |                                 .++.+|.|.+|++.|.+.
T Consensus        18 ~~~~C~~~~C~k~f~~~~~l~~H~~~--h---------------------------------~~~~~~~C~~C~~~f~~~   62 (73)
T 1f2i_G           18 RPYACPVESCDRRFSRSDELTRHIRI--H---------------------------------TGQKPFQCRICMRNFSRS   62 (73)
T ss_dssp             CCEECSSTTBCCEESSHHHHHHHHHH--H---------------------------------HCCCCEECTTTCCEESCH
T ss_pred             CccCCcCCCCCCccCCHHHHHHHHHh--h---------------------------------CCCCCeECCCCCchhCCH
Confidence            479997  699999999999999997  4                                 134679999999999999


Q ss_pred             HHHHHHHhh
Q 015261           80 KALAQHLNS   88 (410)
Q Consensus        80 ~~l~~Hl~s   88 (410)
                      ..|..|++.
T Consensus        63 ~~l~~H~~~   71 (73)
T 1f2i_G           63 DHLTTHIRT   71 (73)
T ss_dssp             HHHHHHHTT
T ss_pred             HHHHHHHHh
Confidence            999999875

>2eod_A TNF receptor-associated factor 4; zinc binding, NF-KB, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.05  E-value=1.4e-06  Score=64.85  Aligned_cols=50  Identities=24%  Similarity=0.463  Sum_probs=44.5

Q ss_pred             CCCcccccccccCChHHHhhhhhhccccchhhhhhcCCCCCCHHHHHHHHHHHHHhhhcCCCCCccccc-CcCCccCChH
Q 015261            2 PGLTCNSCNREFNDDAEQKLHYKSDWHRYNLKRKVAGVPGVTEALFLARQAALAQEKNKNATPMTYSCG-LCGKGYRSSK   80 (410)
Q Consensus         2 ~~ftC~~C~~~F~~~~~qr~H~ksdwHrYNlKRrva~Lppvs~~~F~~k~~~l~~~~~~~~~~~~~~C~-~C~K~f~s~~   80 (410)
                      .+|.|..|+..|. ...|+.|+++  .                                  ++++|.|. .|+|.|....
T Consensus         9 ~~~~C~~C~k~f~-~~~L~~H~~~--~----------------------------------~~~p~~C~~~C~k~f~~~~   51 (66)
T 2eod_A            9 RTQPCTYCTKEFV-FDTIQSHQYQ--C----------------------------------PRLPVACPNQCGVGTVARE   51 (66)
T ss_dssp             CEEECSSSCCEEE-HHHHHHHHHH--C----------------------------------SSSEEECTTCCSCCEEETT
T ss_pred             CCeeccccCCccC-HHHHHHHHHH--c----------------------------------CCcCccCCcccCcccccHH
Confidence            3699999999999 9999999987  2                                  35789999 9999999999


Q ss_pred             HHHHHHhh
Q 015261           81 ALAQHLNS   88 (410)
Q Consensus        81 ~l~~Hl~s   88 (410)
                      .|..|++.
T Consensus        52 ~L~~H~~~   59 (66)
T 2eod_A           52 DLPGHLKD   59 (66)
T ss_dssp             THHHHHHT
T ss_pred             HHHHHHHh
Confidence            99999974

>2eod_A TNF receptor-associated factor 4; zinc binding, NF-KB, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=97.98  E-value=1.1e-06  Score=65.28  Aligned_cols=54  Identities=15%  Similarity=0.280  Sum_probs=47.2

Q ss_pred             CCCcccCCCCCCCCChhHHhhhhhhhhcCCCCCcccccChHHHHHHHHhHhcCCcccc-ccCCCCcccCCHHHHHHHHHh
Q 015261          180 FDPACCFMCDLPHDAIENCMVHMHKCHGFFIPDVEYLKDPKGLLTYLGLKVKRDFMCL-YCNDRCHPFNSLEAVRKHMEA  258 (410)
Q Consensus       180 i~p~~ClfC~~~f~~~~~~~~HM~~~Hgf~ip~~~~lvd~~gLl~yl~~ki~~~~~Cl-~C~~~gk~F~s~~alr~HM~~  258 (410)
                      ..|+.|.+|++.|. ...|..||.+ +|                       ..++.|. .|+   +.|.....|+.||+.
T Consensus         8 ~~~~~C~~C~k~f~-~~~L~~H~~~-~~-----------------------~~p~~C~~~C~---k~f~~~~~L~~H~~~   59 (66)
T 2eod_A            8 KRTQPCTYCTKEFV-FDTIQSHQYQ-CP-----------------------RLPVACPNQCG---VGTVAREDLPGHLKD   59 (66)
T ss_dssp             CCEEECSSSCCEEE-HHHHHHHHHH-CS-----------------------SSEEECTTCCS---CCEEETTTHHHHHHT
T ss_pred             CCCeeccccCCccC-HHHHHHHHHH-cC-----------------------CcCccCCcccC---cccccHHHHHHHHHh
Confidence            36899999999999 9999999997 65                       2479999 999   999999999999975


Q ss_pred             cCCcc
Q 015261          259 KRHCK  263 (410)
Q Consensus       259 k~HCk  263 (410)
                        ||-
T Consensus        60 --hc~   62 (66)
T 2eod_A           60 --SCN   62 (66)
T ss_dssp             --TSS
T ss_pred             --hcc
Confidence              664

>2ghf_A ZHX1, zinc fingers and homeoboxes protein 1; C2H2 zinc fingers, 4-stranded parallel/anti-parallel beta- sheet, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=97.94  E-value=3.8e-06  Score=69.18  Aligned_cols=56  Identities=25%  Similarity=0.401  Sum_probs=45.9

Q ss_pred             CCCcccccccccCChHHHhhhhhhccccchhhhhhcCCCCCCHHHHHHHHHHHHHhhhcCCCCCcccccCcCCccCChHH
Q 015261            2 PGLTCNSCNREFNDDAEQKLHYKSDWHRYNLKRKVAGVPGVTEALFLARQAALAQEKNKNATPMTYSCGLCGKGYRSSKA   81 (410)
Q Consensus         2 ~~ftC~~C~~~F~~~~~qr~H~ksdwHrYNlKRrva~Lppvs~~~F~~k~~~l~~~~~~~~~~~~~~C~~C~K~f~s~~~   81 (410)
                      .+|.|..|+..|.....|+.|+++. |        .+                      ..++++|.|.+|+|.|.+...
T Consensus        17 kpy~C~~Cgk~F~~~~~L~~H~r~~-H--------~~----------------------~~~ekpf~C~~Cgk~F~~~~~   65 (102)
T 2ghf_A           17 GGYECKYCTFQTPDLNMFTFHVDSE-H--------PN----------------------VVLNSSYVCVECNFLTKRYDA   65 (102)
T ss_dssp             SSEECSSCSCEESCHHHHHHHHHHH-C--------SS----------------------CCCSCCEEETTTTEEESSTHH
T ss_pred             cCcCCCCCCCccCCHHHHHHHHHhh-C--------CC----------------------CCCCCCcCCCCCCcccCCHHH
Confidence            4799999999999999999999852 3        01                      013568999999999999999


Q ss_pred             HHHH-Hhh
Q 015261           82 LAQH-LNS   88 (410)
Q Consensus        82 l~~H-l~s   88 (410)
                      |..| ++.
T Consensus        66 L~~H~~r~   73 (102)
T 2ghf_A           66 LSEHNLKY   73 (102)
T ss_dssp             HHTHHHHT
T ss_pred             HHHHHHHh
Confidence            9999 543

>2wbt_A B-129; zinc finger; 2.70A {Sulfolobus virus 1}

Probab=97.94  E-value=7e-06  Score=68.66  Aligned_cols=51  Identities=20%  Similarity=0.418  Sum_probs=46.3

Q ss_pred             CCcccCCCCCCCCChhHHhhhhhhhhcCCCCCcccccChHHHHHHHHhHhcCCccccccCCCCcccCCHHHHHHHHHhc
Q 015261          181 DPACCFMCDLPHDAIENCMVHMHKCHGFFIPDVEYLKDPKGLLTYLGLKVKRDFMCLYCNDRCHPFNSLEAVRKHMEAK  259 (410)
Q Consensus       181 ~p~~ClfC~~~f~~~~~~~~HM~~~Hgf~ip~~~~lvd~~gLl~yl~~ki~~~~~Cl~C~~~gk~F~s~~alr~HM~~k  259 (410)
                      .|+.|.+|++.|.+...|..||.+| .                        .+|.|..|+   +.|.+...|+.||+.+
T Consensus        73 ~~~~C~~C~k~f~~~~~l~~H~~~H-~------------------------~~~~C~~C~---k~f~~~~~l~~H~~~h  123 (129)
T 2wbt_A           73 SQFVCPLCLMPFSSSVSLKQHIRYT-E------------------------HTKVCPVCK---KEFTSTDSALDHVCKK  123 (129)
T ss_dssp             CSEECTTTCCEESSHHHHHHHHHHT-C------------------------CCCBCTTTC---CBCSSHHHHHHHHHHT
T ss_pred             CCeECCCCCcccCCHhHHHHHHHHC-C------------------------CCCCCCCCC---cccCCHHHHHHHHHHH
Confidence            6899999999999999999999985 2                        368999999   9999999999999875

>2ghf_A ZHX1, zinc fingers and homeoboxes protein 1; C2H2 zinc fingers, 4-stranded parallel/anti-parallel beta- sheet, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=97.94  E-value=3.7e-06  Score=69.26  Aligned_cols=57  Identities=16%  Similarity=0.389  Sum_probs=46.6

Q ss_pred             CCCcccCCCCCCCCChhHHhhhhhhhhcCCCCCcccccChHHHHHHHHhHhcCCccccccCCCCcccCCHHHHHHH-HHh
Q 015261          180 FDPACCFMCDLPHDAIENCMVHMHKCHGFFIPDVEYLKDPKGLLTYLGLKVKRDFMCLYCNDRCHPFNSLEAVRKH-MEA  258 (410)
Q Consensus       180 i~p~~ClfC~~~f~~~~~~~~HM~~~Hgf~ip~~~~lvd~~gLl~yl~~ki~~~~~Cl~C~~~gk~F~s~~alr~H-M~~  258 (410)
                      ..|+.|..|++.|.+...|..||+..|....                   ...+|.|..|+   +.|.+...|+.| |+.
T Consensus        16 ekpy~C~~Cgk~F~~~~~L~~H~r~~H~~~~-------------------~ekpf~C~~Cg---k~F~~~~~L~~H~~r~   73 (102)
T 2ghf_A           16 EGGYECKYCTFQTPDLNMFTFHVDSEHPNVV-------------------LNSSYVCVECN---FLTKRYDALSEHNLKY   73 (102)
T ss_dssp             CSSEECSSCSCEESCHHHHHHHHHHHCSSCC-------------------CSCCEEETTTT---EEESSTHHHHTHHHHT
T ss_pred             CcCcCCCCCCCccCCHHHHHHHHHhhCCCCC-------------------CCCCcCCCCCC---cccCCHHHHHHHHHHh
Confidence            4789999999999999999999986452100                   02479999999   999999999999 554

>2epa_A Krueppel-like factor 10; transforming growth factor-beta-inducible early growth response protein 1, TGFB-inducible early growth response protein 1; NMR {Homo sapiens}

Probab=97.90  E-value=7e-06  Score=61.59  Aligned_cols=52  Identities=21%  Similarity=0.582  Sum_probs=45.3

Q ss_pred             CCCcccc--cccccCChHHHhhhhhhccccchhhhhhcCCCCCCHHHHHHHHHHHHHhhhcCCCCCcccccC--cCCccC
Q 015261            2 PGLTCNS--CNREFNDDAEQKLHYKSDWHRYNLKRKVAGVPGVTEALFLARQAALAQEKNKNATPMTYSCGL--CGKGYR   77 (410)
Q Consensus         2 ~~ftC~~--C~~~F~~~~~qr~H~ksdwHrYNlKRrva~Lppvs~~~F~~k~~~l~~~~~~~~~~~~~~C~~--C~K~f~   77 (410)
                      .+|.|..  |+..|.....|+.|+++  |                                 .++++|.|.+  |+|.|.
T Consensus        16 ~~~~C~~~~C~k~f~~~~~L~~H~~~--H---------------------------------~~~~~~~C~~~~C~k~f~   60 (72)
T 2epa_A           16 RSHICSHPGCGKTYFKSSHLKAHTRT--H---------------------------------TGEKPFSCSWKGCERRFA   60 (72)
T ss_dssp             CCEECSSTTTCCEESSHHHHHHHHHH--H---------------------------------SSSCSEECCCTTCCCEES
T ss_pred             CceeCCCCCCccccCCHHHHHHHHHh--c---------------------------------CCCCCccCCCCCCCcccC
Confidence            4689998  99999999999999998  4                                 1356899976  999999


Q ss_pred             ChHHHHHHHhh
Q 015261           78 SSKALAQHLNS   88 (410)
Q Consensus        78 s~~~l~~Hl~s   88 (410)
                      ....|..|++.
T Consensus        61 ~~~~l~~H~~~   71 (72)
T 2epa_A           61 RSDELSRHRRT   71 (72)
T ss_dssp             SHHHHHHHTTT
T ss_pred             CHHHHHhHhhc
Confidence            99999999864

>2ej4_A Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc binding, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=97.87  E-value=2.4e-05  Score=61.54  Aligned_cols=62  Identities=13%  Similarity=0.008  Sum_probs=47.4

Q ss_pred             CCcccCCCCCCCCChhHHhhhhhhhhcCCCCCcccccChHHHHHHHHhHhcCCccccccCCCCcccCCHHHHHHHHHhc
Q 015261          181 DPACCFMCDLPHDAIENCMVHMHKCHGFFIPDVEYLKDPKGLLTYLGLKVKRDFMCLYCNDRCHPFNSLEAVRKHMEAK  259 (410)
Q Consensus       181 ~p~~ClfC~~~f~~~~~~~~HM~~~Hgf~ip~~~~lvd~~gLl~yl~~ki~~~~~Cl~C~~~gk~F~s~~alr~HM~~k  259 (410)
                      ..+.|..|++.|.+...|..||..+|.-..|...+              +...+.|..|+   +.|.+...|+.||+.+
T Consensus        24 ~~~~C~~C~k~f~~~~~L~~H~~~~H~~~~~~~~~--------------~c~~~~C~~C~---k~f~~~~~L~~H~~~H   85 (95)
T 2ej4_A           24 LSRPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNH--------------VCYWEECPREG---KSFKAKYKLVNHIRVH   85 (95)
T ss_dssp             SSSSCCCCCCCCSSHHHHHHHHHHTTTCCTTCSCC--------------CCCCTTCSSTT---CCCSSHHHHHHHHHHH
T ss_pred             CCCcccccccccCCHHHHHHHHHHhccCCCCCCcc--------------ceeccCCCCCC---cccCCHHHHHHHHHhc
Confidence            35679999999999999999999855422221111              01138999999   9999999999999974

>2eps_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=97.87  E-value=7.2e-06  Score=58.51  Aligned_cols=43  Identities=23%  Similarity=0.393  Sum_probs=36.6

Q ss_pred             CCCcccccccccCChHHHhhhhhhccccchhhhhhcCCCCCCHHHHHHHHHHHHHhhhcCCCCCcccccCcCCccCC
Q 015261            2 PGLTCNSCNREFNDDAEQKLHYKSDWHRYNLKRKVAGVPGVTEALFLARQAALAQEKNKNATPMTYSCGLCGKGYRS   78 (410)
Q Consensus         2 ~~ftC~~C~~~F~~~~~qr~H~ksdwHrYNlKRrva~Lppvs~~~F~~k~~~l~~~~~~~~~~~~~~C~~C~K~f~s   78 (410)
                      .+|.|..|+..|.....|+.|++.- |                                 .++++|.|.+|+|.|.+
T Consensus        11 k~~~C~~C~k~f~~~~~L~~H~~~~-H---------------------------------~~~k~~~C~~C~k~F~~   53 (54)
T 2eps_A           11 KPYICQSCGKGFSRPDHLNGHIKQV-H---------------------------------TSERPHKCQVWVSGPSS   53 (54)
T ss_dssp             CCEECSSSCCEESSHHHHHHHHHHT-S---------------------------------CCCCCCCSSSSCCSSCC
T ss_pred             CCeECCCCCcccCCHHHHHHHHHHh-c---------------------------------CCCCCccCCCCCCCCCC
Confidence            4799999999999999999999832 4                                 24568999999999986

>2dlk_A Novel protein; ZF-C2H2 domain, zinc finger protein 692, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=97.85  E-value=1.1e-05  Score=61.41  Aligned_cols=54  Identities=20%  Similarity=0.356  Sum_probs=45.9

Q ss_pred             CCcccCC--CCCCCCChhHHhhhhhhhhcCCCCCcccccChHHHHHHHHhHhcCCccccc--cCCCCcccCCHHHHHHHH
Q 015261          181 DPACCFM--CDLPHDAIENCMVHMHKCHGFFIPDVEYLKDPKGLLTYLGLKVKRDFMCLY--CNDRCHPFNSLEAVRKHM  256 (410)
Q Consensus       181 ~p~~Clf--C~~~f~~~~~~~~HM~~~Hgf~ip~~~~lvd~~gLl~yl~~ki~~~~~Cl~--C~~~gk~F~s~~alr~HM  256 (410)
                      .++.|..  |++.|.+...|..||...|.-                      ..++.|..  |+   +.|.+...|+.||
T Consensus         6 ~~~~C~~~~C~~~f~~~~~L~~H~~~~H~~----------------------~~~~~C~~~~C~---k~f~~~~~L~~H~   60 (79)
T 2dlk_A            6 SGMPCDFPGCGRIFSNRQYLNHHKKYQHIH----------------------QKSFSCPEPACG---KSFNFKKHLKEHM   60 (79)
T ss_dssp             SSEECSSTTTCCEESSHHHHHHHHHHGGGS----------------------CCCEECSCTTTC---CEESSHHHHHHHH
T ss_pred             CCccCCCCCCcCccCCHHHHHHHHHHHhCC----------------------CCCeECCCCCCc---CccCCHHHHHHHH
Confidence            5678887  999999999999999943431                      24789999  99   9999999999999


Q ss_pred             Hhc
Q 015261          257 EAK  259 (410)
Q Consensus       257 ~~k  259 (410)
                      +.+
T Consensus        61 ~~H   63 (79)
T 2dlk_A           61 KLH   63 (79)
T ss_dssp             HHH
T ss_pred             HHh
Confidence            864

>2ej4_A Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc binding, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=97.80  E-value=2e-05  Score=61.98  Aligned_cols=60  Identities=25%  Similarity=0.375  Sum_probs=44.9

Q ss_pred             CCcccccccccCChHHHhhhhhhccccchhhhhhcCCCCCCHHHHHHHHHHHHHhhhcCCCCCcccccCcCCccCChHHH
Q 015261            3 GLTCNSCNREFNDDAEQKLHYKSDWHRYNLKRKVAGVPGVTEALFLARQAALAQEKNKNATPMTYSCGLCGKGYRSSKAL   82 (410)
Q Consensus         3 ~ftC~~C~~~F~~~~~qr~H~ksdwHrYNlKRrva~Lppvs~~~F~~k~~~l~~~~~~~~~~~~~~C~~C~K~f~s~~~l   82 (410)
                      .|.|..|+..|.+...|+.|+++. |.        +.+|..                 ......|.|.+|+|.|.+...|
T Consensus        25 ~~~C~~C~k~f~~~~~L~~H~~~~-H~--------~~~~~~-----------------~~~c~~~~C~~C~k~f~~~~~L   78 (95)
T 2ej4_A           25 SRPKKSCDRTFSTMHELVTHVTME-HV--------GGPEQN-----------------NHVCYWEECPREGKSFKAKYKL   78 (95)
T ss_dssp             SSSCCCCCCCCSSHHHHHHHHHHT-TT--------CCTTCS-----------------CCCCCCTTCSSTTCCCSSHHHH
T ss_pred             CCcccccccccCCHHHHHHHHHHh-cc--------CCCCCC-----------------ccceeccCCCCCCcccCCHHHH
Confidence            377999999999999999999984 31        211100                 0001238999999999999999


Q ss_pred             HHHHhh
Q 015261           83 AQHLNS   88 (410)
Q Consensus        83 ~~Hl~s   88 (410)
                      ..|++.
T Consensus        79 ~~H~~~   84 (95)
T 2ej4_A           79 VNHIRV   84 (95)
T ss_dssp             HHHHHH
T ss_pred             HHHHHh
Confidence            999975

>2eps_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=97.73  E-value=1.5e-05  Score=56.74  Aligned_cols=42  Identities=17%  Similarity=0.218  Sum_probs=36.6

Q ss_pred             CCcccCCCCCCCCChhHHhhhhh-hhhcCCCCCcccccChHHHHHHHHhHhcCCccccccCCCCcccCC
Q 015261          181 DPACCFMCDLPHDAIENCMVHMH-KCHGFFIPDVEYLKDPKGLLTYLGLKVKRDFMCLYCNDRCHPFNS  248 (410)
Q Consensus       181 ~p~~ClfC~~~f~~~~~~~~HM~-~~Hgf~ip~~~~lvd~~gLl~yl~~ki~~~~~Cl~C~~~gk~F~s  248 (410)
                      .|+.|..|++.|.....|..||. +|.+                       ..+|.|..|+   +.|.+
T Consensus        11 k~~~C~~C~k~f~~~~~L~~H~~~~H~~-----------------------~k~~~C~~C~---k~F~~   53 (54)
T 2eps_A           11 KPYICQSCGKGFSRPDHLNGHIKQVHTS-----------------------ERPHKCQVWV---SGPSS   53 (54)
T ss_dssp             CCEECSSSCCEESSHHHHHHHHHHTSCC-----------------------CCCCCSSSSC---CSSCC
T ss_pred             CCeECCCCCcccCCHHHHHHHHHHhcCC-----------------------CCCccCCCCC---CCCCC
Confidence            68999999999999999999998 6554                       2479999999   89976

>1wir_A Protein arginine N-methyltransferase 3; C2H2 zinc finger domain, PRMT3, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: g.37.1.5

Probab=97.63  E-value=1.4e-05  Score=67.87  Aligned_cols=49  Identities=22%  Similarity=0.369  Sum_probs=42.8

Q ss_pred             CCcccCCCCCCCCChhHHhhhhhhhhcCCCCCcc-----cccChHHHHHHHHhH
Q 015261          181 DPACCFMCDLPHDAIENCMVHMHKCHGFFIPDVE-----YLKDPKGLLTYLGLK  229 (410)
Q Consensus       181 ~p~~ClfC~~~f~~~~~~~~HM~~~Hgf~ip~~~-----~lvd~~gLl~yl~~k  229 (410)
                      .+..||||...|.+...+++||+..|+|.+....     -+++...||||++.+
T Consensus        14 ~~~~CLFCd~~~~s~~~~l~H~k~~H~FD~~~i~~~~~LDfY~~IKLINyIR~~   67 (121)
T 1wir_A           14 QHTPCLFCDRLFASAEETFSHCKLEHQFNIDSMVHKHGLEFYGYIKLINFIRLK   67 (121)
T ss_dssp             CCEECSSSCCEESSHHHHHHHHHHSSCCCHHHHHHHTTCCHHHHHHHHHHHHHT
T ss_pred             CceeEecCCCcccCHHHHHHHHHHhcCCCHHHHHHhcCCCceEEEEEEEeeecc
Confidence            5689999999999999999999999999887642     247889999999865

>2epr_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=97.59  E-value=3.2e-05  Score=53.47  Aligned_cols=24  Identities=25%  Similarity=0.440  Sum_probs=22.6

Q ss_pred             CCCcccccccccCChHHHhhhhhh
Q 015261            2 PGLTCNSCNREFNDDAEQKLHYKS   25 (410)
Q Consensus         2 ~~ftC~~C~~~F~~~~~qr~H~ks   25 (410)
                      .+|.|..|+..|.....|+.|+++
T Consensus        11 k~~~C~~C~k~f~~~~~L~~H~~~   34 (48)
T 2epr_A           11 KQVACEICGKIFRDVYHLNRHKLS   34 (48)
T ss_dssp             CSEEETTTTEEESSHHHHHHHGGG
T ss_pred             cCeeCCCCCcccCCHHHHHHHHHh
Confidence            479999999999999999999998

>2ctu_A Zinc finger protein 483; zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=97.55  E-value=1.1e-06  Score=65.67  Aligned_cols=27  Identities=11%  Similarity=0.049  Sum_probs=24.6

Q ss_pred             CCcccCCCCCCCCChhHHhhhhhhhhc
Q 015261          181 DPACCFMCDLPHDAIENCMVHMHKCHG  207 (410)
Q Consensus       181 ~p~~ClfC~~~f~~~~~~~~HM~~~Hg  207 (410)
                      .++.|..|++.|.+...|..||.+|+|
T Consensus        38 ~~~~C~~C~~~f~~~~~l~~H~~~H~~   64 (73)
T 2ctu_A           38 KTPMCEKCRKDSCQEAALNKDEGNESG   64 (73)
T ss_dssp             SSCCCHHHHHTCSCCCSSCCCSSCCCC
T ss_pred             CCCCCCCCChhhcCHHHHHHHHHhhcC
Confidence            467899999999999999999999876

>2ytn_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=97.52  E-value=6.8e-05  Score=51.02  Aligned_cols=27  Identities=19%  Similarity=0.213  Sum_probs=25.4

Q ss_pred             CCcccCCCCCCCCChhHHhhhhhhhhc
Q 015261          181 DPACCFMCDLPHDAIENCMVHMHKCHG  207 (410)
Q Consensus       181 ~p~~ClfC~~~f~~~~~~~~HM~~~Hg  207 (410)
                      .|+.|.+|++.|.+...|..||.+|+|
T Consensus        11 k~~~C~~C~k~F~~~~~L~~H~~~H~~   37 (46)
T 2ytn_A           11 KPYKCNECGKVFTQNSHLARHRGIHTG   37 (46)
T ss_dssp             SSCBCTTTCCBCSSHHHHHHHGGGTSC
T ss_pred             cCeECCCCCCeeCCHHHHHHHhhhcCC
Confidence            689999999999999999999999876

>2epr_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=97.51  E-value=3.2e-05  Score=53.49  Aligned_cols=38  Identities=11%  Similarity=0.162  Sum_probs=33.8

Q ss_pred             CCCcccCCCCCCCCChhHHhhhhhhhhcCCCCCcccccChHHHHHHHHhHhcCCccccccC
Q 015261          180 FDPACCFMCDLPHDAIENCMVHMHKCHGFFIPDVEYLKDPKGLLTYLGLKVKRDFMCLYCN  240 (410)
Q Consensus       180 i~p~~ClfC~~~f~~~~~~~~HM~~~Hgf~ip~~~~lvd~~gLl~yl~~ki~~~~~Cl~C~  240 (410)
                      ..++.|.+|++.|.+...|..||.+|++                       ..+|.|..|+
T Consensus        10 ~k~~~C~~C~k~f~~~~~L~~H~~~H~~-----------------------~k~~~C~~C~   47 (48)
T 2epr_A           10 RKQVACEICGKIFRDVYHLNRHKLSHSG-----------------------EKPYSSGPSS   47 (48)
T ss_dssp             CCSEEETTTTEEESSHHHHHHHGGGSCS-----------------------CCCCCSCCCC
T ss_pred             CcCeeCCCCCcccCCHHHHHHHHHhcCC-----------------------CCCccCCCCC
Confidence            3689999999999999999999999876                       3479999998

>2eq4_A Zinc finger protein 224; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=97.46  E-value=7.5e-05  Score=50.70  Aligned_cols=27  Identities=15%  Similarity=0.177  Sum_probs=25.3

Q ss_pred             CCcccCCCCCCCCChhHHhhhhhhhhc
Q 015261          181 DPACCFMCDLPHDAIENCMVHMHKCHG  207 (410)
Q Consensus       181 ~p~~ClfC~~~f~~~~~~~~HM~~~Hg  207 (410)
                      .|+.|.+|++.|.+...|..||.+|+|
T Consensus        11 k~~~C~~C~k~f~~~~~L~~H~~~H~~   37 (46)
T 2eq4_A           11 KLYNCKECGKSFSRAPCLLKHERLHSG   37 (46)
T ss_dssp             CCCCBTTTTBCCSCHHHHHHHHHHCCS
T ss_pred             CCeECCCCCCccCchHHHHHHHHhcCC
Confidence            689999999999999999999999776

>2eov_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=97.46  E-value=8.5e-05  Score=50.42  Aligned_cols=27  Identities=19%  Similarity=0.262  Sum_probs=25.3

Q ss_pred             CCcccCCCCCCCCChhHHhhhhhhhhc
Q 015261          181 DPACCFMCDLPHDAIENCMVHMHKCHG  207 (410)
Q Consensus       181 ~p~~ClfC~~~f~~~~~~~~HM~~~Hg  207 (410)
                      .|+.|.+|++.|.+...|..||.+|+|
T Consensus        11 ~~~~C~~C~k~f~~~~~L~~H~~~H~~   37 (46)
T 2eov_A           11 KPYKCSDCGKSFTWKSRLRIHQKCHTG   37 (46)
T ss_dssp             CSCBCSSSCCBCSSHHHHHHHHHHHSC
T ss_pred             CCccCCccChhhCCHHHHHHHHHhcCC
Confidence            689999999999999999999999776

>2epq_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=97.46  E-value=5.4e-05  Score=51.37  Aligned_cols=37  Identities=16%  Similarity=0.264  Sum_probs=33.0

Q ss_pred             CCcccCCCCCCCCChhHHhhhhhhhhcCCCCCcccccChHHHHHHHHhHhcCCccccccC
Q 015261          181 DPACCFMCDLPHDAIENCMVHMHKCHGFFIPDVEYLKDPKGLLTYLGLKVKRDFMCLYCN  240 (410)
Q Consensus       181 ~p~~ClfC~~~f~~~~~~~~HM~~~Hgf~ip~~~~lvd~~gLl~yl~~ki~~~~~Cl~C~  240 (410)
                      .|+.|..|++.|.....|..||++|++                       ..++.|..||
T Consensus         9 k~~~C~~C~k~f~~~~~l~~H~~~H~~-----------------------~~~~~C~~cg   45 (45)
T 2epq_A            9 KPYSCPVCGLRFKRKDRMSYHVRSHDG-----------------------SVGKSGPSSG   45 (45)
T ss_dssp             CSSEETTTTEECSCHHHHHHHHHHHSC-----------------------CCCCCCCCCC
T ss_pred             CCCcCCCCCcccCCHHHHHHHHHHccC-----------------------CCCCCCcCCC
Confidence            689999999999999999999999876                       3478999886

>2ytt_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=97.45  E-value=7.9e-05  Score=50.78  Aligned_cols=27  Identities=15%  Similarity=0.169  Sum_probs=25.4

Q ss_pred             CCcccCCCCCCCCChhHHhhhhhhhhc
Q 015261          181 DPACCFMCDLPHDAIENCMVHMHKCHG  207 (410)
Q Consensus       181 ~p~~ClfC~~~f~~~~~~~~HM~~~Hg  207 (410)
                      .|+.|..|++.|.+...|..||.+|++
T Consensus        11 k~~~C~~C~k~f~~~~~L~~H~~~H~~   37 (46)
T 2ytt_A           11 KPYQCSECGKSFSGSYRLTQHWITHTR   37 (46)
T ss_dssp             CTTCCSSSCCCCSSHHHHHHHHTHHHH
T ss_pred             CCeeCCCCCcccCCHHHHHHHHHHcCC
Confidence            689999999999999999999999876

>2eop_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=97.45  E-value=9.2e-05  Score=50.26  Aligned_cols=27  Identities=22%  Similarity=0.367  Sum_probs=25.3

Q ss_pred             CCcccCCCCCCCCChhHHhhhhhhhhc
Q 015261          181 DPACCFMCDLPHDAIENCMVHMHKCHG  207 (410)
Q Consensus       181 ~p~~ClfC~~~f~~~~~~~~HM~~~Hg  207 (410)
                      .|+.|.+|++.|.+...|..||.+|+|
T Consensus        11 ~~~~C~~C~k~f~~~~~L~~H~~~H~~   37 (46)
T 2eop_A           11 KPHECRECGKSFSFNSQLIVHQRIHTG   37 (46)
T ss_dssp             CSCBCTTTCCBCSSHHHHHHHHTTTTT
T ss_pred             CCeeCCCCCchhCCHHHHHHHHHHcCC
Confidence            689999999999999999999999776

>2ytr_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=97.44  E-value=9.6e-05  Score=50.15  Aligned_cols=27  Identities=19%  Similarity=0.300  Sum_probs=25.3

Q ss_pred             CCcccCCCCCCCCChhHHhhhhhhhhc
Q 015261          181 DPACCFMCDLPHDAIENCMVHMHKCHG  207 (410)
Q Consensus       181 ~p~~ClfC~~~f~~~~~~~~HM~~~Hg  207 (410)
                      .|+.|..|++.|.+...|..||.+|+|
T Consensus        11 k~~~C~~C~k~f~~~~~L~~H~~~H~~   37 (46)
T 2ytr_A           11 KPYKCNECGKAFSQTSKLARHQRIHTG   37 (46)
T ss_dssp             CTTCCTTTCCCCSSHHHHHHHHTTTTT
T ss_pred             cCcCCCCCCCccCCHHHHHHHHHhcCC
Confidence            689999999999999999999999776

>2elz_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=97.44  E-value=0.00011  Score=50.00  Aligned_cols=27  Identities=22%  Similarity=0.231  Sum_probs=25.3

Q ss_pred             CCcccCCCCCCCCChhHHhhhhhhhhc
Q 015261          181 DPACCFMCDLPHDAIENCMVHMHKCHG  207 (410)
Q Consensus       181 ~p~~ClfC~~~f~~~~~~~~HM~~~Hg  207 (410)
                      .|+.|..|++.|.+...|..||.+|+|
T Consensus        11 k~~~C~~C~k~F~~~~~L~~H~~~H~~   37 (46)
T 2elz_A           11 KPYKCEDCGKGYNRRLNLDMHQRVHMG   37 (46)
T ss_dssp             SSCBCSSSCCBCSSHHHHHHHGGGGGS
T ss_pred             CCeeCcccCchhCCHHHHHHHHHhcCC
Confidence            689999999999999999999999876

>2emk_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ysv_A

Probab=97.43  E-value=9.8e-05  Score=50.29  Aligned_cols=27  Identities=19%  Similarity=0.347  Sum_probs=25.3

Q ss_pred             CCcccCCCCCCCCChhHHhhhhhhhhc
Q 015261          181 DPACCFMCDLPHDAIENCMVHMHKCHG  207 (410)
Q Consensus       181 ~p~~ClfC~~~f~~~~~~~~HM~~~Hg  207 (410)
                      .|+.|.+|++.|.....|..||.+|+|
T Consensus        11 k~~~C~~C~k~F~~~~~L~~H~~~H~~   37 (46)
T 2emk_A           11 KPYECKECGKAFSQTTHLIQHQRVHTG   37 (46)
T ss_dssp             CSCBCSSSCCBCSCHHHHHHHHHHHSS
T ss_pred             CceECCCCCchhCCHHHHHHHHHHcCC
Confidence            679999999999999999999999776

>2em0_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens}

Probab=97.43  E-value=0.00012  Score=49.79  Aligned_cols=27  Identities=19%  Similarity=0.289  Sum_probs=25.2

Q ss_pred             CCcccCCCCCCCCChhHHhhhhhhhhc
Q 015261          181 DPACCFMCDLPHDAIENCMVHMHKCHG  207 (410)
Q Consensus       181 ~p~~ClfC~~~f~~~~~~~~HM~~~Hg  207 (410)
                      .|+.|..|++.|.+...|..||.+|+|
T Consensus        11 k~~~C~~C~k~F~~~~~L~~H~~~H~~   37 (46)
T 2em0_A           11 KTWKCRECDMCFSQASSLRLHQNVHVG   37 (46)
T ss_dssp             CCCCCSSSCCCCSSHHHHHHHGGGGSS
T ss_pred             cCeECCCCCcccCCHHHHHHHHHHcCC
Confidence            689999999999999999999999776

>2eoq_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=97.43  E-value=0.0001  Score=50.07  Aligned_cols=27  Identities=15%  Similarity=0.156  Sum_probs=25.3

Q ss_pred             CCcccCCCCCCCCChhHHhhhhhhhhc
Q 015261          181 DPACCFMCDLPHDAIENCMVHMHKCHG  207 (410)
Q Consensus       181 ~p~~ClfC~~~f~~~~~~~~HM~~~Hg  207 (410)
                      .|+.|.+|++.|.+...|..||.+|+|
T Consensus        11 ~~~~C~~C~k~f~~~~~L~~H~~~H~~   37 (46)
T 2eoq_A           11 KPFKCDICGKSFCGRSRLNRHSMVHTA   37 (46)
T ss_dssp             CSCCCSSSCCCCSSHHHHHHHHHHTTC
T ss_pred             CCcCCCcCCchhCCHHHHHHHHHHcCC
Confidence            689999999999999999999999876

>2ytq_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=97.43  E-value=9.9e-05  Score=50.28  Aligned_cols=27  Identities=22%  Similarity=0.480  Sum_probs=25.3

Q ss_pred             CCcccCCCCCCCCChhHHhhhhhhhhc
Q 015261          181 DPACCFMCDLPHDAIENCMVHMHKCHG  207 (410)
Q Consensus       181 ~p~~ClfC~~~f~~~~~~~~HM~~~Hg  207 (410)
                      .|+.|.+|++.|.+...|..||.+|+|
T Consensus        11 k~~~C~~C~k~f~~~~~L~~H~~~H~~   37 (46)
T 2ytq_A           11 KPYGCSECGKAFSSKSYLIIHMRTHSG   37 (46)
T ss_dssp             CSCBCSSSCCBCSCHHHHHHHHTTTCC
T ss_pred             CCcCCCccChhhCChHHHHHHHHHhCC
Confidence            679999999999999999999999776

>1zr9_A Zinc finger protein 593; DNA binding, structural genomics, PSI, protein structure initiative, center for eukaryotic structural genomics, CESG; NMR {Homo sapiens} SCOP: g.37.1.4

Probab=97.42  E-value=2.6e-05  Score=66.40  Aligned_cols=70  Identities=20%  Similarity=0.198  Sum_probs=33.8

Q ss_pred             ccchhhhhhcCCCCCCHHHHHHHHHHHHH-----hhhcCCCCCcccccCcCCccCChHHHHHHHhhhhhhhhhcc
Q 015261           28 HRYNLKRKVAGVPGVTEALFLARQAALAQ-----EKNKNATPMTYSCGLCGKGYRSSKALAQHLNSRSHIMRASQ   97 (410)
Q Consensus        28 HrYNlKRrva~Lppvs~~~F~~k~~~l~~-----~~~~~~~~~~~~C~~C~K~f~s~~~l~~Hl~skkHk~~~~~   97 (410)
                      |.-..|||..+|--|-.+.-.+....+..     ....++++.+|+|.+|+|.|.+...|..|+++|+|+.++..
T Consensus         7 ~~~~tkrr~rDlDqI~~dl~~e~~~k~~~~~~~~~ded~tGekpfyC~~C~K~F~~~~~L~~H~rsK~HKrrvk~   81 (124)
T 1zr9_A            7 HLEKAKRRRPDLDEIHRELRPQGSARPQPDPNAEFDPDLPGGGLHRCLACARYFIDSTNLKTHFRSKDHKKRLKQ   81 (124)
T ss_dssp             -----------------------------CCSCSSCSSSGGGGCSEETTTTEECSSHHHHHHHTTCHHHHHHHHH
T ss_pred             hHHhhcccCCCHHHHHHHHHhHHHHHhhccccccccccCCCCcceEcccCcchhCCHHHHHHHHhhhhhhHHHHH
Confidence            44456777777765544432122222221     11114578899999999999999999999999999986543

>2epz_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=97.41  E-value=9.7e-05  Score=50.23  Aligned_cols=27  Identities=19%  Similarity=0.250  Sum_probs=25.3

Q ss_pred             CCcccCCCCCCCCChhHHhhhhhhhhc
Q 015261          181 DPACCFMCDLPHDAIENCMVHMHKCHG  207 (410)
Q Consensus       181 ~p~~ClfC~~~f~~~~~~~~HM~~~Hg  207 (410)
                      .|+.|.+|++.|.+...|..||.+|+|
T Consensus        11 k~~~C~~C~k~f~~~~~L~~H~~~H~~   37 (46)
T 2epz_A           11 KPFDCIDCGKAFSDHIGLNQHRRIHTG   37 (46)
T ss_dssp             CSBCCTTTCCCBSSHHHHHHHHTTTTT
T ss_pred             CCeECCCCCceeCCHHHHHHHHHHhCC
Confidence            689999999999999999999999876

>2ytm_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=97.41  E-value=9.8e-05  Score=50.38  Aligned_cols=27  Identities=22%  Similarity=0.493  Sum_probs=25.4

Q ss_pred             CCcccCCCCCCCCChhHHhhhhhhhhc
Q 015261          181 DPACCFMCDLPHDAIENCMVHMHKCHG  207 (410)
Q Consensus       181 ~p~~ClfC~~~f~~~~~~~~HM~~~Hg  207 (410)
                      .|+.|..|++.|.+...|..||.+|++
T Consensus        11 k~~~C~~C~k~f~~~~~L~~H~~~H~~   37 (46)
T 2ytm_A           11 KPYKCMECGKAFGDNSSCTQHQRLHTG   37 (46)
T ss_dssp             CSSSBTTTTBCCSSHHHHHHHHHHHHS
T ss_pred             CCcCCCCCCchhCCHHHHHHHHHHcCC
Confidence            689999999999999999999999876

>2ely_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ena_A 2en4_A

Probab=97.38  E-value=0.00011  Score=50.12  Aligned_cols=27  Identities=22%  Similarity=0.319  Sum_probs=25.3

Q ss_pred             CCcccCCCCCCCCChhHHhhhhhhhhc
Q 015261          181 DPACCFMCDLPHDAIENCMVHMHKCHG  207 (410)
Q Consensus       181 ~p~~ClfC~~~f~~~~~~~~HM~~~Hg  207 (410)
                      .|+.|..|++.|.+...|..||.+|+|
T Consensus        11 k~~~C~~C~k~f~~~~~L~~H~~~H~~   37 (46)
T 2ely_A           11 KPFKCVECGKGFSRRSALNVHHKLHTG   37 (46)
T ss_dssp             CSBCCSSSCCCBSSTTHHHHHHHHHSC
T ss_pred             CCcccCccCcccCCHHHHHHHHHHcCC
Confidence            689999999999999999999999776

>2eoe_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=97.37  E-value=8.6e-05  Score=50.42  Aligned_cols=27  Identities=19%  Similarity=0.244  Sum_probs=25.3

Q ss_pred             CCcccCCCCCCCCChhHHhhhhhhhhc
Q 015261          181 DPACCFMCDLPHDAIENCMVHMHKCHG  207 (410)
Q Consensus       181 ~p~~ClfC~~~f~~~~~~~~HM~~~Hg  207 (410)
                      .|+.|..|++.|.+...|..||.+|+|
T Consensus        11 ~~~~C~~C~k~F~~~~~L~~H~~~H~~   37 (46)
T 2eoe_A           11 KPYKCNECGKVFTQNSHLANHQRIHTG   37 (46)
T ss_dssp             CSSEETTTTEECSSHHHHHHHHGGGSC
T ss_pred             CCeECCCcChhhCCHHHHHHHHHHcCC
Confidence            689999999999999999999999876

>2em7_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=97.36  E-value=9.2e-05  Score=50.34  Aligned_cols=27  Identities=19%  Similarity=0.229  Sum_probs=25.3

Q ss_pred             CCcccCCCCCCCCChhHHhhhhhhhhc
Q 015261          181 DPACCFMCDLPHDAIENCMVHMHKCHG  207 (410)
Q Consensus       181 ~p~~ClfC~~~f~~~~~~~~HM~~~Hg  207 (410)
                      .|+.|..|++.|.+...|..||.+|+|
T Consensus        11 k~~~C~~C~k~f~~~~~L~~H~~~H~~   37 (46)
T 2em7_A           11 KPYKCEECGKGFICRRDLYTHHMVHTG   37 (46)
T ss_dssp             CSEECSSSCCEESCHHHHHHHGGGGTT
T ss_pred             cCccCCCccchhCCHHHHHHHHHHhCC
Confidence            689999999999999999999999876

>2ytg_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=97.36  E-value=7.7e-05  Score=50.73  Aligned_cols=27  Identities=19%  Similarity=0.239  Sum_probs=25.3

Q ss_pred             CCcccCCCCCCCCChhHHhhhhhhhhc
Q 015261          181 DPACCFMCDLPHDAIENCMVHMHKCHG  207 (410)
Q Consensus       181 ~p~~ClfC~~~f~~~~~~~~HM~~~Hg  207 (410)
                      .|+.|.+|++.|.+...|..||.+|+|
T Consensus        11 ~~~~C~~C~k~f~~~~~L~~H~~~H~~   37 (46)
T 2ytg_A           11 KPFKCGECGKSYNQRVHLTQHQRVHTG   37 (46)
T ss_dssp             CSEECTTTCCEESSSHHHHTTGGGGSS
T ss_pred             CCeECCCCCcccCCHHHHHHHHHHcCC
Confidence            689999999999999999999999876

>2emp_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=97.36  E-value=8.3e-05  Score=50.58  Aligned_cols=27  Identities=19%  Similarity=0.321  Sum_probs=25.4

Q ss_pred             CCcccCCCCCCCCChhHHhhhhhhhhc
Q 015261          181 DPACCFMCDLPHDAIENCMVHMHKCHG  207 (410)
Q Consensus       181 ~p~~ClfC~~~f~~~~~~~~HM~~~Hg  207 (410)
                      .|+.|.+|++.|.....|..||.+|+|
T Consensus        11 k~~~C~~C~k~f~~~~~L~~H~~~H~~   37 (46)
T 2emp_A           11 KPYMCNECGKAFSVYSSLTTHQVIHTG   37 (46)
T ss_dssp             CSEECSSSCCEESCHHHHHHHHHHHHC
T ss_pred             cCeECCCCCchhCCHHHHHHHHHHcCC
Confidence            689999999999999999999999876

>2eml_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=97.35  E-value=9.3e-05  Score=50.33  Aligned_cols=27  Identities=22%  Similarity=0.395  Sum_probs=25.4

Q ss_pred             CCcccCCCCCCCCChhHHhhhhhhhhc
Q 015261          181 DPACCFMCDLPHDAIENCMVHMHKCHG  207 (410)
Q Consensus       181 ~p~~ClfC~~~f~~~~~~~~HM~~~Hg  207 (410)
                      .|+.|.+|++.|.+...|..||.+|+|
T Consensus        11 k~~~C~~C~k~f~~~~~L~~H~~~H~~   37 (46)
T 2eml_A           11 KPYECSVCGKAFSHRQSLSVHQRIHSG   37 (46)
T ss_dssp             CSEECSSSCCEESSHHHHHHHHGGGSS
T ss_pred             CCeeCCCcCCccCCHHHHHHHHHHhcC
Confidence            689999999999999999999999876

>2emx_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=97.34  E-value=0.0001  Score=49.61  Aligned_cols=27  Identities=19%  Similarity=0.375  Sum_probs=25.3

Q ss_pred             CCcccCCCCCCCCChhHHhhhhhhhhc
Q 015261          181 DPACCFMCDLPHDAIENCMVHMHKCHG  207 (410)
Q Consensus       181 ~p~~ClfC~~~f~~~~~~~~HM~~~Hg  207 (410)
                      .|+.|..|++.|.+...|..||.+|+|
T Consensus         9 k~~~C~~C~k~f~~~~~L~~H~~~H~~   35 (44)
T 2emx_A            9 KPFGCSCCEKAFSSKSYLLVHQQTHAE   35 (44)
T ss_dssp             CCEECSSSSCEESSHHHHHHHHHHHTS
T ss_pred             cCccCCCCCcccCCHHHHHHHHHHhCC
Confidence            689999999999999999999999776

>2emh_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=97.33  E-value=9.1e-05  Score=50.38  Aligned_cols=27  Identities=22%  Similarity=0.417  Sum_probs=25.4

Q ss_pred             CCcccCCCCCCCCChhHHhhhhhhhhc
Q 015261          181 DPACCFMCDLPHDAIENCMVHMHKCHG  207 (410)
Q Consensus       181 ~p~~ClfC~~~f~~~~~~~~HM~~~Hg  207 (410)
                      .|+.|.+|++.|.+...|..||.+|+|
T Consensus        11 k~~~C~~C~k~F~~~~~L~~H~~~H~~   37 (46)
T 2emh_A           11 RPYICTVCGKAFTDRSNLIKHQKIHTG   37 (46)
T ss_dssp             CSEECTTTCCEESSHHHHHHHHHHHHC
T ss_pred             CCcCCCCCCchhCCHHHHHHHHHhcCC
Confidence            689999999999999999999999876

>2eoo_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=97.33  E-value=9.5e-05  Score=50.36  Aligned_cols=27  Identities=15%  Similarity=0.316  Sum_probs=25.4

Q ss_pred             CCcccCCCCCCCCChhHHhhhhhhhhc
Q 015261          181 DPACCFMCDLPHDAIENCMVHMHKCHG  207 (410)
Q Consensus       181 ~p~~ClfC~~~f~~~~~~~~HM~~~Hg  207 (410)
                      .|+.|.+|++.|.+...|..||.+|+|
T Consensus        11 k~~~C~~C~k~F~~~~~L~~H~~~H~~   37 (46)
T 2eoo_A           11 RPYGCNECGKNFGRHSHLIEHLKRHFR   37 (46)
T ss_dssp             CCEECSSSCCEESSHHHHHHHHHHHHS
T ss_pred             CCEEccccCcccCCHHHHHHHHHHHcC
Confidence            689999999999999999999999776

>2emf_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=97.32  E-value=0.00011  Score=50.11  Aligned_cols=27  Identities=15%  Similarity=0.203  Sum_probs=25.4

Q ss_pred             CCcccCCCCCCCCChhHHhhhhhhhhc
Q 015261          181 DPACCFMCDLPHDAIENCMVHMHKCHG  207 (410)
Q Consensus       181 ~p~~ClfC~~~f~~~~~~~~HM~~~Hg  207 (410)
                      .|+.|..|++.|.+...|..||.+|+|
T Consensus        11 k~~~C~~C~k~F~~~~~L~~H~~~H~~   37 (46)
T 2emf_A           11 KHFECTECGKAFTRKSTLSMHQKIHTG   37 (46)
T ss_dssp             CCEECSSSCCEESCHHHHHHHGGGTSC
T ss_pred             CCeECCCCCchhCCHHHHHHHHHHhCC
Confidence            689999999999999999999999876

>2el4_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eog_A 2em1_A 2emw_A 2eok_A

Probab=97.32  E-value=9.5e-05  Score=50.18  Aligned_cols=27  Identities=22%  Similarity=0.420  Sum_probs=25.3

Q ss_pred             CCcccCCCCCCCCChhHHhhhhhhhhc
Q 015261          181 DPACCFMCDLPHDAIENCMVHMHKCHG  207 (410)
Q Consensus       181 ~p~~ClfC~~~f~~~~~~~~HM~~~Hg  207 (410)
                      .|+.|.+|++.|.+...|..||.+|+|
T Consensus        11 k~~~C~~C~k~f~~~~~L~~H~~~H~~   37 (46)
T 2el4_A           11 KPYGCSQCAKTFSLKSQLIVHQRSHTG   37 (46)
T ss_dssp             CSEECSSSSCEESSHHHHHHHGGGSSS
T ss_pred             CceECCCCCchhCCHHHHHHHHHHhCC
Confidence            679999999999999999999999776

>2ytd_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=97.32  E-value=9.8e-05  Score=50.20  Aligned_cols=27  Identities=19%  Similarity=0.254  Sum_probs=25.3

Q ss_pred             CCcccCCCCCCCCChhHHhhhhhhhhc
Q 015261          181 DPACCFMCDLPHDAIENCMVHMHKCHG  207 (410)
Q Consensus       181 ~p~~ClfC~~~f~~~~~~~~HM~~~Hg  207 (410)
                      .|+.|.+|++.|.+...|..||.+|+|
T Consensus        11 k~~~C~~C~k~f~~~~~L~~H~~~H~~   37 (46)
T 2ytd_A           11 KPYKCSECGKAFHRHTHLNEHRRIHTG   37 (46)
T ss_dssp             CSEECSSSCCEESSHHHHHHHHHHHTC
T ss_pred             cCeECCCCCCeeCChHHHHHHHHHcCC
Confidence            689999999999999999999999876

>2emy_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=97.32  E-value=9.9e-05  Score=50.18  Aligned_cols=27  Identities=19%  Similarity=0.368  Sum_probs=25.4

Q ss_pred             CCcccCCCCCCCCChhHHhhhhhhhhc
Q 015261          181 DPACCFMCDLPHDAIENCMVHMHKCHG  207 (410)
Q Consensus       181 ~p~~ClfC~~~f~~~~~~~~HM~~~Hg  207 (410)
                      .|+.|.+|++.|.+...|..||.+|+|
T Consensus        11 k~~~C~~C~k~F~~~~~L~~H~~~H~~   37 (46)
T 2emy_A           11 NPYECHECGKAFSRKYQLISHQRTHAG   37 (46)
T ss_dssp             CCEECSSSCCEESSHHHHHHHHHHHTT
T ss_pred             cCcCCCCCCcccCcHHHHHHHHHHcCC
Confidence            689999999999999999999999776

>2em9_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2yrh_A

Probab=97.32  E-value=0.00011  Score=49.83  Aligned_cols=27  Identities=19%  Similarity=0.278  Sum_probs=25.3

Q ss_pred             CCcccCCCCCCCCChhHHhhhhhhhhc
Q 015261          181 DPACCFMCDLPHDAIENCMVHMHKCHG  207 (410)
Q Consensus       181 ~p~~ClfC~~~f~~~~~~~~HM~~~Hg  207 (410)
                      .|+.|.+|++.|.+...|..||.+|+|
T Consensus        11 k~~~C~~C~k~f~~~~~L~~H~~~H~~   37 (46)
T 2em9_A           11 KPYNCKECGKSFRWASCLLKHQRVHSG   37 (46)
T ss_dssp             CSEECSSSCCEESSHHHHHHHGGGGTS
T ss_pred             cCeECCccccccCChHHHHHHHHHhCC
Confidence            689999999999999999999999776

>2eme_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=97.31  E-value=0.00011  Score=49.93  Aligned_cols=27  Identities=19%  Similarity=0.335  Sum_probs=25.2

Q ss_pred             CCcccCCCCCCCCChhHHhhhhhhhhc
Q 015261          181 DPACCFMCDLPHDAIENCMVHMHKCHG  207 (410)
Q Consensus       181 ~p~~ClfC~~~f~~~~~~~~HM~~~Hg  207 (410)
                      .|+.|.+|++.|.+...|..||.+|+|
T Consensus        11 k~~~C~~C~k~f~~~~~L~~H~~~H~~   37 (46)
T 2eme_A           11 KPYVCDYCGKAFGLSAELVRHQRIHTG   37 (46)
T ss_dssp             CSEECSSSCCEESSHHHHHHHHGGGCC
T ss_pred             CCeECCCCChhhCCHHHHHHHHHhcCC
Confidence            689999999999999999999998776

>2eq0_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=97.31  E-value=9.7e-05  Score=50.22  Aligned_cols=27  Identities=19%  Similarity=0.244  Sum_probs=25.3

Q ss_pred             CCcccCCCCCCCCChhHHhhhhhhhhc
Q 015261          181 DPACCFMCDLPHDAIENCMVHMHKCHG  207 (410)
Q Consensus       181 ~p~~ClfC~~~f~~~~~~~~HM~~~Hg  207 (410)
                      .|+.|.+|++.|.+...|..||.+|+|
T Consensus        11 k~~~C~~C~k~F~~~~~L~~H~~~H~~   37 (46)
T 2eq0_A           11 KPYKCHECGKVFRRNSHLARHQLIHTG   37 (46)
T ss_dssp             CCEECTTTCCEESSHHHHHHHHTTTCC
T ss_pred             CCeECCCCCchhCCHHHHHHHHHHcCC
Confidence            689999999999999999999999776

>2yu8_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=97.31  E-value=8.9e-05  Score=50.41  Aligned_cols=27  Identities=19%  Similarity=0.243  Sum_probs=25.4

Q ss_pred             CCcccCCCCCCCCChhHHhhhhhhhhc
Q 015261          181 DPACCFMCDLPHDAIENCMVHMHKCHG  207 (410)
Q Consensus       181 ~p~~ClfC~~~f~~~~~~~~HM~~~Hg  207 (410)
                      .|+.|..|++.|.....|..||.+|+|
T Consensus        11 k~~~C~~C~k~f~~~~~L~~H~~~H~~   37 (46)
T 2yu8_A           11 KPYKCNECGKVFTQNSHLARHRRVHTG   37 (46)
T ss_dssp             SSEECSSSCCEESSSHHHHHHTHHHHS
T ss_pred             CCeECCcCCchhCCHHHHHHHHHhcCC
Confidence            689999999999999999999999876

>2yso_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=97.30  E-value=0.0001  Score=50.10  Aligned_cols=27  Identities=15%  Similarity=0.097  Sum_probs=25.3

Q ss_pred             CCcccCCCCCCCCChhHHhhhhhhhhc
Q 015261          181 DPACCFMCDLPHDAIENCMVHMHKCHG  207 (410)
Q Consensus       181 ~p~~ClfC~~~f~~~~~~~~HM~~~Hg  207 (410)
                      .|+.|..|++.|.+...|..||.+|+|
T Consensus        11 ~~~~C~~C~k~f~~~~~L~~H~~~H~~   37 (46)
T 2yso_A           11 KSHQCRECGEIFFQYVSLIEHQVLHMG   37 (46)
T ss_dssp             CCEECTTTCCEESSHHHHHHHHHHHSC
T ss_pred             CCEEccccChhhCCHHHHHHHHHHhCC
Confidence            689999999999999999999999776

>2emm_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=97.30  E-value=0.0001  Score=50.05  Aligned_cols=27  Identities=19%  Similarity=0.289  Sum_probs=25.3

Q ss_pred             CCcccCCCCCCCCChhHHhhhhhhhhc
Q 015261          181 DPACCFMCDLPHDAIENCMVHMHKCHG  207 (410)
Q Consensus       181 ~p~~ClfC~~~f~~~~~~~~HM~~~Hg  207 (410)
                      .|+.|..|++.|.+...|..||.+|+|
T Consensus        11 k~~~C~~C~k~f~~~~~L~~H~~~H~~   37 (46)
T 2emm_A           11 RPHKCNECGKSFIQSAHLIQHQRIHTG   37 (46)
T ss_dssp             CSEECSSSCCEESSHHHHHHHHHHHSC
T ss_pred             CCeeCCCCChhhCCHHHHHHHHHHhCC
Confidence            689999999999999999999999776

>2ep0_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=97.30  E-value=0.0001  Score=50.16  Aligned_cols=27  Identities=22%  Similarity=0.319  Sum_probs=25.3

Q ss_pred             CCcccCCCCCCCCChhHHhhhhhhhhc
Q 015261          181 DPACCFMCDLPHDAIENCMVHMHKCHG  207 (410)
Q Consensus       181 ~p~~ClfC~~~f~~~~~~~~HM~~~Hg  207 (410)
                      .|+.|..|++.|.....|..||..|++
T Consensus        11 ~~~~C~~C~k~f~~~~~L~~H~~~H~~   37 (46)
T 2ep0_A           11 KPYKCDVCHKSFRYGSSLTVHQRIHTG   37 (46)
T ss_dssp             CSEECSSSCCEESSHHHHHHHHTTTSS
T ss_pred             CCeeCcccCcccCChHHHHHHHHHhCC
Confidence            689999999999999999999999776

>2em5_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=97.30  E-value=0.0001  Score=50.24  Aligned_cols=27  Identities=15%  Similarity=0.202  Sum_probs=25.2

Q ss_pred             CCcccCCCCCCCCChhHHhhhhhhhhc
Q 015261          181 DPACCFMCDLPHDAIENCMVHMHKCHG  207 (410)
Q Consensus       181 ~p~~ClfC~~~f~~~~~~~~HM~~~Hg  207 (410)
                      .|+.|..|++.|.+...|..||.+|+|
T Consensus        11 ~~~~C~~C~k~f~~~~~L~~H~~~H~~   37 (46)
T 2em5_A           11 KSHQCHECGRGFTLKSHLNQHQRIHTG   37 (46)
T ss_dssp             CSEECSSSCCEESSHHHHHHHHTTTSC
T ss_pred             CCeECCcCCCccCCHHHHHHHHHHhCC
Confidence            689999999999999999999999776

>2epw_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=97.29  E-value=9.2e-05  Score=50.25  Aligned_cols=27  Identities=15%  Similarity=0.247  Sum_probs=25.2

Q ss_pred             CCcccCCCCCCCCChhHHhhhhhhhhc
Q 015261          181 DPACCFMCDLPHDAIENCMVHMHKCHG  207 (410)
Q Consensus       181 ~p~~ClfC~~~f~~~~~~~~HM~~~Hg  207 (410)
                      .|+.|..|++.|.+...|..||.+|+|
T Consensus        11 k~~~C~~C~k~F~~~~~L~~H~~~H~~   37 (46)
T 2epw_A           11 KPCKCTECGKAFCWKSQLIMHQRTHVD   37 (46)
T ss_dssp             CSEECSSSCCEESSSHHHHHHHHHCCS
T ss_pred             CCeeCCCCCCccCCHHHHHHHHHHhCC
Confidence            679999999999999999999999776

>2ene_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=97.28  E-value=0.0001  Score=50.07  Aligned_cols=27  Identities=19%  Similarity=0.194  Sum_probs=25.2

Q ss_pred             CCcccCCCCCCCCChhHHhhhhhhhhc
Q 015261          181 DPACCFMCDLPHDAIENCMVHMHKCHG  207 (410)
Q Consensus       181 ~p~~ClfC~~~f~~~~~~~~HM~~~Hg  207 (410)
                      .|+.|..|++.|.+...|..||.+|+|
T Consensus        11 k~~~C~~C~k~f~~~~~L~~H~~~H~~   37 (46)
T 2ene_A           11 KPYKCNECGKVFRHNSYLSRHQRIHTG   37 (46)
T ss_dssp             SSEECSSSCCEESSHHHHHHHHTTTCC
T ss_pred             CCeECCCCCchhCChHHHHHHHhhcCC
Confidence            689999999999999999999999776

>2en8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=97.28  E-value=0.00011  Score=49.91  Aligned_cols=27  Identities=19%  Similarity=0.241  Sum_probs=25.2

Q ss_pred             CCcccCCCCCCCCChhHHhhhhhhhhc
Q 015261          181 DPACCFMCDLPHDAIENCMVHMHKCHG  207 (410)
Q Consensus       181 ~p~~ClfC~~~f~~~~~~~~HM~~~Hg  207 (410)
                      .|+.|..|++.|.+...|..||.+|+|
T Consensus        11 ~~~~C~~C~k~f~~~~~L~~H~~~H~~   37 (46)
T 2en8_A           11 KSHTCDECGKNFCYISALRIHQRVHMG   37 (46)
T ss_dssp             SSEECTTTCCEESSHHHHHHHHTTTCC
T ss_pred             CCeECCCcCcccCCHHHHHHHHHHhCC
Confidence            679999999999999999999998776

>2enc_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=97.26  E-value=0.00013  Score=49.64  Aligned_cols=27  Identities=22%  Similarity=0.413  Sum_probs=25.3

Q ss_pred             CCcccCCCCCCCCChhHHhhhhhhhhc
Q 015261          181 DPACCFMCDLPHDAIENCMVHMHKCHG  207 (410)
Q Consensus       181 ~p~~ClfC~~~f~~~~~~~~HM~~~Hg  207 (410)
                      .|+.|.+|++.|.+...|..||..|+|
T Consensus        11 k~~~C~~C~k~f~~~~~L~~H~~~H~~   37 (46)
T 2enc_A           11 KPFKCEECGKGFYTNSQCYSHQRSHSG   37 (46)
T ss_dssp             CSEECSSSCCEESSHHHHHHHHHHSCC
T ss_pred             CCcCCCCCCCcCCChHHHHHHHHHhCC
Confidence            689999999999999999999999776

>2em8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=97.25  E-value=0.00014  Score=49.53  Aligned_cols=27  Identities=19%  Similarity=0.246  Sum_probs=25.4

Q ss_pred             CCcccCCCCCCCCChhHHhhhhhhhhc
Q 015261          181 DPACCFMCDLPHDAIENCMVHMHKCHG  207 (410)
Q Consensus       181 ~p~~ClfC~~~f~~~~~~~~HM~~~Hg  207 (410)
                      .|+.|..|++.|.+...|..||.+|+|
T Consensus        11 k~~~C~~C~k~f~~~~~L~~H~~~H~~   37 (46)
T 2em8_A           11 KPYKCVECGKGYKRRLDLDFHQRVHTG   37 (46)
T ss_dssp             CSEECSSSCCEESSHHHHHHHHHHHHC
T ss_pred             CCeECcccCchhCCHHHHHHHHHHHcC
Confidence            689999999999999999999999876

>2el6_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens}

Probab=97.25  E-value=0.00013  Score=49.58  Aligned_cols=27  Identities=19%  Similarity=0.342  Sum_probs=25.3

Q ss_pred             CCcccCCCCCCCCChhHHhhhhhhhhc
Q 015261          181 DPACCFMCDLPHDAIENCMVHMHKCHG  207 (410)
Q Consensus       181 ~p~~ClfC~~~f~~~~~~~~HM~~~Hg  207 (410)
                      .|+.|..|++.|.+...|..||.+|++
T Consensus        11 k~~~C~~C~k~f~~~~~L~~H~~~H~~   37 (46)
T 2el6_A           11 NPYKCSQCEKSFSGKLRLLVHQRMHTR   37 (46)
T ss_dssp             CSEECSSSSCEESSHHHHHHHHGGGCC
T ss_pred             CCeECCCCCcccCCHHHHHHHHHHcCC
Confidence            689999999999999999999999776

>2ema_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2emc_A

Probab=97.24  E-value=0.00015  Score=49.28  Aligned_cols=27  Identities=15%  Similarity=0.134  Sum_probs=25.4

Q ss_pred             CCcccCCCCCCCCChhHHhhhhhhhhc
Q 015261          181 DPACCFMCDLPHDAIENCMVHMHKCHG  207 (410)
Q Consensus       181 ~p~~ClfC~~~f~~~~~~~~HM~~~Hg  207 (410)
                      .|+.|..|++.|.....|..||.+|+|
T Consensus        11 k~~~C~~C~k~f~~~~~L~~H~~~H~~   37 (46)
T 2ema_A           11 KRYKCNECGKVFSRNSQLSQHQKIHTG   37 (46)
T ss_dssp             CCEECSSSCCEESSHHHHHHHHTGGGC
T ss_pred             cCcCCCCCcchhCCHHHHHHHHHhcCC
Confidence            689999999999999999999999876

>2en6_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=97.24  E-value=0.00011  Score=49.96  Aligned_cols=27  Identities=19%  Similarity=0.289  Sum_probs=25.3

Q ss_pred             CCcccCCCCCCCCChhHHhhhhhhhhc
Q 015261          181 DPACCFMCDLPHDAIENCMVHMHKCHG  207 (410)
Q Consensus       181 ~p~~ClfC~~~f~~~~~~~~HM~~~Hg  207 (410)
                      .|+.|..|++.|.+...|..||.+|+|
T Consensus        11 ~~~~C~~C~k~f~~~~~L~~H~~~H~~   37 (46)
T 2en6_A           11 KPYGCNECGKTFSQKSILSAHQRTHTG   37 (46)
T ss_dssp             CCEEETTTTEEESSHHHHHHHHHHHSS
T ss_pred             cCeECCCCCcccCchHHHHHHHHHcCC
Confidence            689999999999999999999999776

>2ytn_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=97.23  E-value=0.00021  Score=48.50  Aligned_cols=24  Identities=21%  Similarity=0.491  Sum_probs=22.7

Q ss_pred             CCCcccccccccCChHHHhhhhhh
Q 015261            2 PGLTCNSCNREFNDDAEQKLHYKS   25 (410)
Q Consensus         2 ~~ftC~~C~~~F~~~~~qr~H~ks   25 (410)
                      .+|.|..|+..|.....|+.|+++
T Consensus        11 k~~~C~~C~k~F~~~~~L~~H~~~   34 (46)
T 2ytn_A           11 KPYKCNECGKVFTQNSHLARHRGI   34 (46)
T ss_dssp             SSCBCTTTCCBCSSHHHHHHHGGG
T ss_pred             cCeECCCCCCeeCCHHHHHHHhhh
Confidence            479999999999999999999998

>2ep2_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=97.22  E-value=0.00014  Score=49.42  Aligned_cols=27  Identities=22%  Similarity=0.396  Sum_probs=25.3

Q ss_pred             CCcccCCCCCCCCChhHHhhhhhhhhc
Q 015261          181 DPACCFMCDLPHDAIENCMVHMHKCHG  207 (410)
Q Consensus       181 ~p~~ClfC~~~f~~~~~~~~HM~~~Hg  207 (410)
                      .|+.|.+|++.|.+...|..||.+|+|
T Consensus        11 k~~~C~~C~k~f~~~~~L~~H~~~H~~   37 (46)
T 2ep2_A           11 KPYECSICGKSFTKKSQLHVHQQIHTG   37 (46)
T ss_dssp             CSEECSSSCCEESSHHHHHHHHHTTSS
T ss_pred             cCcCCCCCCcccCCHHHHHHHHHHhCC
Confidence            689999999999999999999999776

>2ytj_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=97.21  E-value=0.00014  Score=49.35  Aligned_cols=27  Identities=19%  Similarity=0.281  Sum_probs=25.3

Q ss_pred             CCcccCCCCCCCCChhHHhhhhhhhhc
Q 015261          181 DPACCFMCDLPHDAIENCMVHMHKCHG  207 (410)
Q Consensus       181 ~p~~ClfC~~~f~~~~~~~~HM~~~Hg  207 (410)
                      .|+.|.+|++.|.+...|..||.+|+|
T Consensus        11 k~~~C~~C~k~f~~~~~L~~H~~~H~~   37 (46)
T 2ytj_A           11 KPYICAECGKAFTIRSNLIKHQKIHTK   37 (46)
T ss_dssp             CSEECSSSCCEESSHHHHHHHHHHTSC
T ss_pred             cCeECCCCChhhCCHHHHHHHHHHcCC
Confidence            689999999999999999999999776

>2ytk_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=97.21  E-value=0.00015  Score=49.27  Aligned_cols=27  Identities=19%  Similarity=0.245  Sum_probs=25.3

Q ss_pred             CCcccCCCCCCCCChhHHhhhhhhhhc
Q 015261          181 DPACCFMCDLPHDAIENCMVHMHKCHG  207 (410)
Q Consensus       181 ~p~~ClfC~~~f~~~~~~~~HM~~~Hg  207 (410)
                      .|+.|..|++.|.+...|..||.+|+|
T Consensus        11 ~~~~C~~C~k~f~~~~~L~~H~~~H~~   37 (46)
T 2ytk_A           11 KPYKCNECGKVFTQNSHLTNHWRIHTG   37 (46)
T ss_dssp             CSEECSSSCCEESSHHHHHHHHHHHSS
T ss_pred             CCEeCCcCCCccCCHHHHHHHHHHHCC
Confidence            689999999999999999999999876

>2ep3_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=97.19  E-value=0.00015  Score=49.22  Aligned_cols=27  Identities=22%  Similarity=0.378  Sum_probs=25.3

Q ss_pred             CCcccCCCCCCCCChhHHhhhhhhhhc
Q 015261          181 DPACCFMCDLPHDAIENCMVHMHKCHG  207 (410)
Q Consensus       181 ~p~~ClfC~~~f~~~~~~~~HM~~~Hg  207 (410)
                      .|+.|.+|++.|.+...|..||.+|+|
T Consensus        11 k~~~C~~C~k~f~~~~~L~~H~~~H~~   37 (46)
T 2ep3_A           11 KPYRCAECGKAFTDRSNLFTHQKIHTG   37 (46)
T ss_dssp             CSEECSSSCCEESSHHHHHHHHTTTTT
T ss_pred             CCeECCCCCchhCCHHHHHHHHHHcCC
Confidence            689999999999999999999999776

>2en1_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=97.19  E-value=0.00013  Score=49.57  Aligned_cols=27  Identities=19%  Similarity=0.250  Sum_probs=25.3

Q ss_pred             CCcccCCCCCCCCChhHHhhhhhhhhc
Q 015261          181 DPACCFMCDLPHDAIENCMVHMHKCHG  207 (410)
Q Consensus       181 ~p~~ClfC~~~f~~~~~~~~HM~~~Hg  207 (410)
                      .|+.|..|++.|.+...|..||.+|+|
T Consensus        11 ~~~~C~~C~k~f~~~~~L~~H~~~H~~   37 (46)
T 2en1_A           11 KPFKCEECGKRFTQNSQLHSHQRVHTG   37 (46)
T ss_dssp             CSEEETTTTEEESSHHHHHHHGGGGSC
T ss_pred             CCeeCCCCCcccCCHHHHHHHHHHcCC
Confidence            679999999999999999999999776

>2epx_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=97.18  E-value=0.00025  Score=48.17  Aligned_cols=27  Identities=19%  Similarity=0.305  Sum_probs=24.8

Q ss_pred             CCcccCCCCCCCCChhHHhhhhh-hhhc
Q 015261          181 DPACCFMCDLPHDAIENCMVHMH-KCHG  207 (410)
Q Consensus       181 ~p~~ClfC~~~f~~~~~~~~HM~-~~Hg  207 (410)
                      .|+.|..|++.|.....|..||. +|.|
T Consensus        11 k~~~C~~C~k~F~~~~~L~~H~~~~H~~   38 (47)
T 2epx_A           11 KPYECIECGKAFIQNTSLIRHWRYYHTG   38 (47)
T ss_dssp             CSBCCSSSCCCBSSHHHHHHHHTTTTTT
T ss_pred             CCEECCccCchhCChHHHHHHhHhhcCC
Confidence            68999999999999999999999 7655

>2em0_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens}

Probab=97.18  E-value=0.00025  Score=48.14  Aligned_cols=24  Identities=21%  Similarity=0.524  Sum_probs=22.7

Q ss_pred             CCCcccccccccCChHHHhhhhhh
Q 015261            2 PGLTCNSCNREFNDDAEQKLHYKS   25 (410)
Q Consensus         2 ~~ftC~~C~~~F~~~~~qr~H~ks   25 (410)
                      .+|.|..|+..|.....|+.|+++
T Consensus        11 k~~~C~~C~k~F~~~~~L~~H~~~   34 (46)
T 2em0_A           11 KTWKCRECDMCFSQASSLRLHQNV   34 (46)
T ss_dssp             CCCCCSSSCCCCSSHHHHHHHGGG
T ss_pred             cCeECCCCCcccCCHHHHHHHHHH
Confidence            479999999999999999999998

>2ysp_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=97.18  E-value=0.00011  Score=49.88  Aligned_cols=27  Identities=22%  Similarity=0.274  Sum_probs=25.3

Q ss_pred             CCcccCCCCCCCCChhHHhhhhhhhhc
Q 015261          181 DPACCFMCDLPHDAIENCMVHMHKCHG  207 (410)
Q Consensus       181 ~p~~ClfC~~~f~~~~~~~~HM~~~Hg  207 (410)
                      .|+.|..|++.|.+...|..||.+|+|
T Consensus        11 k~~~C~~C~k~f~~~~~L~~H~~~H~~   37 (46)
T 2ysp_A           11 KPYKCEKCGKGYNSKFNLDMHQKVHTG   37 (46)
T ss_dssp             CSEEETTTTEEESCHHHHHHHHTTSCS
T ss_pred             CCeECCCCCCccCCHHHHHHHHHhhCC
Confidence            689999999999999999999999776

>1yui_A GAGA-factor; complex (DNA-binding protein/DNA), chromatin remodeling, DNA binding protein/DNA complex; HET: DNA; NMR {Drosophila melanogaster} SCOP: g.37.1.1 PDB: 1yuj_A*

Probab=97.18  E-value=0.00014  Score=51.46  Aligned_cols=45  Identities=11%  Similarity=0.208  Sum_probs=38.2

Q ss_pred             CCCCCChhHHhhhhhhhhcCCCCCcccccChHHHHHHHHhHhcCCccccccCCCCcccCCHHHHHHHHHhc
Q 015261          189 DLPHDAIENCMVHMHKCHGFFIPDVEYLKDPKGLLTYLGLKVKRDFMCLYCNDRCHPFNSLEAVRKHMEAK  259 (410)
Q Consensus       189 ~~~f~~~~~~~~HM~~~Hgf~ip~~~~lvd~~gLl~yl~~ki~~~~~Cl~C~~~gk~F~s~~alr~HM~~k  259 (410)
                      ++.|.....+..||.+|.|                       ..++.|..|+   +.|.+...|+.||+..
T Consensus         3 ~k~~~~~~~l~~h~~~H~~-----------------------~k~~~C~~C~---k~f~~~~~L~~H~~~H   47 (54)
T 1yui_A            3 AKRAKHPPGTEKPRSRSQS-----------------------EQPATCPICY---AVIRQSRNLRRHLELR   47 (54)
T ss_dssp             CCCCSCSSCCCCCHHHHTS-----------------------SCCEECTTTC---CEESSHHHHHHHHHHH
T ss_pred             ccccCCCcchhhHHHhcCC-----------------------CCCccCCCCC---cccCCHHHHHHHHHHh
Confidence            3567778888999998776                       3479999999   9999999999999874

>2eq4_A Zinc finger protein 224; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=97.17  E-value=0.00024  Score=48.10  Aligned_cols=24  Identities=17%  Similarity=0.355  Sum_probs=22.7

Q ss_pred             CCCcccccccccCChHHHhhhhhh
Q 015261            2 PGLTCNSCNREFNDDAEQKLHYKS   25 (410)
Q Consensus         2 ~~ftC~~C~~~F~~~~~qr~H~ks   25 (410)
                      .+|.|..|+..|.....|+.|+++
T Consensus        11 k~~~C~~C~k~f~~~~~L~~H~~~   34 (46)
T 2eq4_A           11 KLYNCKECGKSFSRAPCLLKHERL   34 (46)
T ss_dssp             CCCCBTTTTBCCSCHHHHHHHHHH
T ss_pred             CCeECCCCCCccCchHHHHHHHHh
Confidence            479999999999999999999998

>2eop_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=97.17  E-value=0.00024  Score=48.13  Aligned_cols=24  Identities=17%  Similarity=0.477  Sum_probs=22.7

Q ss_pred             CCCcccccccccCChHHHhhhhhh
Q 015261            2 PGLTCNSCNREFNDDAEQKLHYKS   25 (410)
Q Consensus         2 ~~ftC~~C~~~F~~~~~qr~H~ks   25 (410)
                      .+|.|..|+..|.....|+.|+++
T Consensus        11 ~~~~C~~C~k~f~~~~~L~~H~~~   34 (46)
T 2eop_A           11 KPHECRECGKSFSFNSQLIVHQRI   34 (46)
T ss_dssp             CSCBCTTTCCBCSSHHHHHHHHTT
T ss_pred             CCeeCCCCCchhCCHHHHHHHHHH
Confidence            479999999999999999999998

>2eoe_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=97.16  E-value=0.00022  Score=48.33  Aligned_cols=24  Identities=21%  Similarity=0.534  Sum_probs=22.7

Q ss_pred             CCCcccccccccCChHHHhhhhhh
Q 015261            2 PGLTCNSCNREFNDDAEQKLHYKS   25 (410)
Q Consensus         2 ~~ftC~~C~~~F~~~~~qr~H~ks   25 (410)
                      .+|.|..|+..|.....|+.|+++
T Consensus        11 ~~~~C~~C~k~F~~~~~L~~H~~~   34 (46)
T 2eoe_A           11 KPYKCNECGKVFTQNSHLANHQRI   34 (46)
T ss_dssp             CSSEETTTTEECSSHHHHHHHHGG
T ss_pred             CCeECCCcChhhCCHHHHHHHHHH
Confidence            479999999999999999999998

>2el4_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eog_A 2em1_A 2emw_A 2eok_A

Probab=97.16  E-value=0.0002  Score=48.47  Aligned_cols=24  Identities=21%  Similarity=0.523  Sum_probs=22.7

Q ss_pred             CCCcccccccccCChHHHhhhhhh
Q 015261            2 PGLTCNSCNREFNDDAEQKLHYKS   25 (410)
Q Consensus         2 ~~ftC~~C~~~F~~~~~qr~H~ks   25 (410)
                      .+|.|..|+..|.....|+.|+++
T Consensus        11 k~~~C~~C~k~f~~~~~L~~H~~~   34 (46)
T 2el4_A           11 KPYGCSQCAKTFSLKSQLIVHQRS   34 (46)
T ss_dssp             CSEECSSSSCEESSHHHHHHHGGG
T ss_pred             CceECCCCCchhCCHHHHHHHHHH
Confidence            479999999999999999999998

>2epq_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=97.16  E-value=0.00019  Score=48.51  Aligned_cols=24  Identities=21%  Similarity=0.501  Sum_probs=22.8

Q ss_pred             CCCcccccccccCChHHHhhhhhh
Q 015261            2 PGLTCNSCNREFNDDAEQKLHYKS   25 (410)
Q Consensus         2 ~~ftC~~C~~~F~~~~~qr~H~ks   25 (410)
                      .+|.|..|+..|.....|+.|+++
T Consensus         9 k~~~C~~C~k~f~~~~~l~~H~~~   32 (45)
T 2epq_A            9 KPYSCPVCGLRFKRKDRMSYHVRS   32 (45)
T ss_dssp             CSSEETTTTEECSCHHHHHHHHHH
T ss_pred             CCCcCCCCCcccCCHHHHHHHHHH
Confidence            479999999999999999999998

>2epz_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=97.15  E-value=0.00024  Score=48.23  Aligned_cols=24  Identities=21%  Similarity=0.524  Sum_probs=22.7

Q ss_pred             CCCcccccccccCChHHHhhhhhh
Q 015261            2 PGLTCNSCNREFNDDAEQKLHYKS   25 (410)
Q Consensus         2 ~~ftC~~C~~~F~~~~~qr~H~ks   25 (410)
                      .+|.|..|+..|.....|+.|+++
T Consensus        11 k~~~C~~C~k~f~~~~~L~~H~~~   34 (46)
T 2epz_A           11 KPFDCIDCGKAFSDHIGLNQHRRI   34 (46)
T ss_dssp             CSBCCTTTCCCBSSHHHHHHHHTT
T ss_pred             CCeECCCCCceeCCHHHHHHHHHH
Confidence            479999999999999999999998

>2em7_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=97.15  E-value=0.00021  Score=48.51  Aligned_cols=24  Identities=17%  Similarity=0.328  Sum_probs=22.6

Q ss_pred             CCCcccccccccCChHHHhhhhhh
Q 015261            2 PGLTCNSCNREFNDDAEQKLHYKS   25 (410)
Q Consensus         2 ~~ftC~~C~~~F~~~~~qr~H~ks   25 (410)
                      .+|.|..|+..|.....|+.|+++
T Consensus        11 k~~~C~~C~k~f~~~~~L~~H~~~   34 (46)
T 2em7_A           11 KPYKCEECGKGFICRRDLYTHHMV   34 (46)
T ss_dssp             CSEECSSSCCEESCHHHHHHHGGG
T ss_pred             cCccCCCccchhCCHHHHHHHHHH
Confidence            479999999999999999999998

>2elz_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=97.15  E-value=0.00026  Score=48.11  Aligned_cols=24  Identities=17%  Similarity=0.560  Sum_probs=22.7

Q ss_pred             CCCcccccccccCChHHHhhhhhh
Q 015261            2 PGLTCNSCNREFNDDAEQKLHYKS   25 (410)
Q Consensus         2 ~~ftC~~C~~~F~~~~~qr~H~ks   25 (410)
                      .+|.|..|+..|.....|+.|+++
T Consensus        11 k~~~C~~C~k~F~~~~~L~~H~~~   34 (46)
T 2elz_A           11 KPYKCEDCGKGYNRRLNLDMHQRV   34 (46)
T ss_dssp             SSCBCSSSCCBCSSHHHHHHHGGG
T ss_pred             CCeeCcccCchhCCHHHHHHHHHh
Confidence            479999999999999999999998

>2ytq_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=97.14  E-value=0.00026  Score=48.06  Aligned_cols=24  Identities=17%  Similarity=0.560  Sum_probs=22.7

Q ss_pred             CCCcccccccccCChHHHhhhhhh
Q 015261            2 PGLTCNSCNREFNDDAEQKLHYKS   25 (410)
Q Consensus         2 ~~ftC~~C~~~F~~~~~qr~H~ks   25 (410)
                      .+|.|..|+..|.....|+.|+++
T Consensus        11 k~~~C~~C~k~f~~~~~L~~H~~~   34 (46)
T 2ytq_A           11 KPYGCSECGKAFSSKSYLIIHMRT   34 (46)
T ss_dssp             CSCBCSSSCCBCSCHHHHHHHHTT
T ss_pred             CCcCCCccChhhCChHHHHHHHHH
Confidence            479999999999999999999998

>2emf_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=97.14  E-value=0.00023  Score=48.39  Aligned_cols=24  Identities=21%  Similarity=0.589  Sum_probs=22.7

Q ss_pred             CCCcccccccccCChHHHhhhhhh
Q 015261            2 PGLTCNSCNREFNDDAEQKLHYKS   25 (410)
Q Consensus         2 ~~ftC~~C~~~F~~~~~qr~H~ks   25 (410)
                      .+|.|..|+..|.....|+.|+++
T Consensus        11 k~~~C~~C~k~F~~~~~L~~H~~~   34 (46)
T 2emf_A           11 KHFECTECGKAFTRKSTLSMHQKI   34 (46)
T ss_dssp             CCEECSSSCCEESCHHHHHHHGGG
T ss_pred             CCeECCCCCchhCCHHHHHHHHHH
Confidence            479999999999999999999998

>2eq0_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=97.13  E-value=0.0002  Score=48.63  Aligned_cols=24  Identities=17%  Similarity=0.423  Sum_probs=22.6

Q ss_pred             CCCcccccccccCChHHHhhhhhh
Q 015261            2 PGLTCNSCNREFNDDAEQKLHYKS   25 (410)
Q Consensus         2 ~~ftC~~C~~~F~~~~~qr~H~ks   25 (410)
                      .+|.|..|+..|.....|+.|+++
T Consensus        11 k~~~C~~C~k~F~~~~~L~~H~~~   34 (46)
T 2eq0_A           11 KPYKCHECGKVFRRNSHLARHQLI   34 (46)
T ss_dssp             CCEECTTTCCEESSHHHHHHHHTT
T ss_pred             CCeECCCCCchhCCHHHHHHHHHH
Confidence            479999999999999999999998

>2eoq_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=97.11  E-value=0.00027  Score=47.91  Aligned_cols=24  Identities=17%  Similarity=0.443  Sum_probs=22.7

Q ss_pred             CCCcccccccccCChHHHhhhhhh
Q 015261            2 PGLTCNSCNREFNDDAEQKLHYKS   25 (410)
Q Consensus         2 ~~ftC~~C~~~F~~~~~qr~H~ks   25 (410)
                      .+|.|..|+..|.....|+.|+++
T Consensus        11 ~~~~C~~C~k~f~~~~~L~~H~~~   34 (46)
T 2eoq_A           11 KPFKCDICGKSFCGRSRLNRHSMV   34 (46)
T ss_dssp             CSCCCSSSCCCCSSHHHHHHHHHH
T ss_pred             CCcCCCcCCchhCCHHHHHHHHHH
Confidence            479999999999999999999998

>2emk_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ysv_A

Probab=97.11  E-value=0.00026  Score=48.07  Aligned_cols=24  Identities=17%  Similarity=0.491  Sum_probs=22.7

Q ss_pred             CCCcccccccccCChHHHhhhhhh
Q 015261            2 PGLTCNSCNREFNDDAEQKLHYKS   25 (410)
Q Consensus         2 ~~ftC~~C~~~F~~~~~qr~H~ks   25 (410)
                      .+|.|..|+..|.....|+.|+++
T Consensus        11 k~~~C~~C~k~F~~~~~L~~H~~~   34 (46)
T 2emk_A           11 KPYECKECGKAFSQTTHLIQHQRV   34 (46)
T ss_dssp             CSCBCSSSCCBCSCHHHHHHHHHH
T ss_pred             CceECCCCCchhCCHHHHHHHHHH
Confidence            479999999999999999999998

>2eov_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=97.10  E-value=0.00026  Score=47.92  Aligned_cols=24  Identities=21%  Similarity=0.576  Sum_probs=22.6

Q ss_pred             CCCcccccccccCChHHHhhhhhh
Q 015261            2 PGLTCNSCNREFNDDAEQKLHYKS   25 (410)
Q Consensus         2 ~~ftC~~C~~~F~~~~~qr~H~ks   25 (410)
                      .+|.|..|+..|.....|+.|+++
T Consensus        11 ~~~~C~~C~k~f~~~~~L~~H~~~   34 (46)
T 2eov_A           11 KPYKCSDCGKSFTWKSRLRIHQKC   34 (46)
T ss_dssp             CSCBCSSSCCBCSSHHHHHHHHHH
T ss_pred             CCccCCccChhhCCHHHHHHHHHh
Confidence            479999999999999999999998

>2ely_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ena_A 2en4_A

Probab=97.10  E-value=0.00021  Score=48.54  Aligned_cols=24  Identities=21%  Similarity=0.521  Sum_probs=22.7

Q ss_pred             CCCcccccccccCChHHHhhhhhh
Q 015261            2 PGLTCNSCNREFNDDAEQKLHYKS   25 (410)
Q Consensus         2 ~~ftC~~C~~~F~~~~~qr~H~ks   25 (410)
                      .+|.|..|+..|.....|+.|+++
T Consensus        11 k~~~C~~C~k~f~~~~~L~~H~~~   34 (46)
T 2ely_A           11 KPFKCVECGKGFSRRSALNVHHKL   34 (46)
T ss_dssp             CSBCCSSSCCCBSSTTHHHHHHHH
T ss_pred             CCcccCccCcccCCHHHHHHHHHH
Confidence            479999999999999999999998

>2eml_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=97.09  E-value=0.00025  Score=48.06  Aligned_cols=24  Identities=17%  Similarity=0.517  Sum_probs=22.7

Q ss_pred             CCCcccccccccCChHHHhhhhhh
Q 015261            2 PGLTCNSCNREFNDDAEQKLHYKS   25 (410)
Q Consensus         2 ~~ftC~~C~~~F~~~~~qr~H~ks   25 (410)
                      .+|.|..|+..|.....|+.|+++
T Consensus        11 k~~~C~~C~k~f~~~~~L~~H~~~   34 (46)
T 2eml_A           11 KPYECSVCGKAFSHRQSLSVHQRI   34 (46)
T ss_dssp             CSEECSSSCCEESSHHHHHHHHGG
T ss_pred             CCeeCCCcCCccCCHHHHHHHHHH
Confidence            479999999999999999999998

>2ep2_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=97.09  E-value=0.00024  Score=48.19  Aligned_cols=24  Identities=17%  Similarity=0.545  Sum_probs=22.6

Q ss_pred             CCCcccccccccCChHHHhhhhhh
Q 015261            2 PGLTCNSCNREFNDDAEQKLHYKS   25 (410)
Q Consensus         2 ~~ftC~~C~~~F~~~~~qr~H~ks   25 (410)
                      .+|.|..|+..|.....|+.|+++
T Consensus        11 k~~~C~~C~k~f~~~~~L~~H~~~   34 (46)
T 2ep2_A           11 KPYECSICGKSFTKKSQLHVHQQI   34 (46)
T ss_dssp             CSEECSSSCCEESSHHHHHHHHHT
T ss_pred             cCcCCCCCCcccCCHHHHHHHHHH
Confidence            479999999999999999999997

>2ytr_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=97.09  E-value=0.0003  Score=47.59  Aligned_cols=24  Identities=21%  Similarity=0.558  Sum_probs=22.7

Q ss_pred             CCCcccccccccCChHHHhhhhhh
Q 015261            2 PGLTCNSCNREFNDDAEQKLHYKS   25 (410)
Q Consensus         2 ~~ftC~~C~~~F~~~~~qr~H~ks   25 (410)
                      .+|.|..|+..|.....|+.|+++
T Consensus        11 k~~~C~~C~k~f~~~~~L~~H~~~   34 (46)
T 2ytr_A           11 KPYKCNECGKAFSQTSKLARHQRI   34 (46)
T ss_dssp             CTTCCTTTCCCCSSHHHHHHHHTT
T ss_pred             cCcCCCCCCCccCCHHHHHHHHHh
Confidence            479999999999999999999998

>2ytg_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=97.08  E-value=0.00024  Score=48.21  Aligned_cols=24  Identities=17%  Similarity=0.552  Sum_probs=22.6

Q ss_pred             CCCcccccccccCChHHHhhhhhh
Q 015261            2 PGLTCNSCNREFNDDAEQKLHYKS   25 (410)
Q Consensus         2 ~~ftC~~C~~~F~~~~~qr~H~ks   25 (410)
                      .+|.|..|+..|.....|+.|+++
T Consensus        11 ~~~~C~~C~k~f~~~~~L~~H~~~   34 (46)
T 2ytg_A           11 KPFKCGECGKSYNQRVHLTQHQRV   34 (46)
T ss_dssp             CSEECTTTCCEESSSHHHHTTGGG
T ss_pred             CCeECCCCCcccCCHHHHHHHHHH
Confidence            479999999999999999999998

>2em5_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=97.08  E-value=0.00025  Score=48.21  Aligned_cols=24  Identities=21%  Similarity=0.486  Sum_probs=22.6

Q ss_pred             CCCcccccccccCChHHHhhhhhh
Q 015261            2 PGLTCNSCNREFNDDAEQKLHYKS   25 (410)
Q Consensus         2 ~~ftC~~C~~~F~~~~~qr~H~ks   25 (410)
                      .+|.|..|+..|.....|+.|+++
T Consensus        11 ~~~~C~~C~k~f~~~~~L~~H~~~   34 (46)
T 2em5_A           11 KSHQCHECGRGFTLKSHLNQHQRI   34 (46)
T ss_dssp             CSEECSSSCCEESSHHHHHHHHTT
T ss_pred             CCeECCcCCCccCCHHHHHHHHHH
Confidence            479999999999999999999998

>1znf_A 31ST zinc finger from XFIN; zinc finger DNA binding domain; NMR {Xenopus laevis} SCOP: g.37.1.1

Probab=97.08  E-value=0.00031  Score=41.63  Aligned_cols=26  Identities=12%  Similarity=0.144  Sum_probs=23.3

Q ss_pred             CcccCCCCCCCCChhHHhhhhhhhhc
Q 015261          182 PACCFMCDLPHDAIENCMVHMHKCHG  207 (410)
Q Consensus       182 p~~ClfC~~~f~~~~~~~~HM~~~Hg  207 (410)
                      |+.|..|++.|.+...|..||++|+|
T Consensus         1 ~~~C~~C~k~f~~~~~l~~H~~~h~~   26 (27)
T 1znf_A            1 XYKCGLCERSFVEKSALSRHQRVHKN   26 (27)
T ss_dssp             -CBCSSSCCBCSSHHHHHHHGGGTCC
T ss_pred             CccCCCCCCcCCCHHHHHHHHHHcCC
Confidence            57899999999999999999998765

>2ytj_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=97.08  E-value=0.00025  Score=48.15  Aligned_cols=24  Identities=21%  Similarity=0.397  Sum_probs=22.6

Q ss_pred             CCCcccccccccCChHHHhhhhhh
Q 015261            2 PGLTCNSCNREFNDDAEQKLHYKS   25 (410)
Q Consensus         2 ~~ftC~~C~~~F~~~~~qr~H~ks   25 (410)
                      .+|.|..|+..|.....|+.|+++
T Consensus        11 k~~~C~~C~k~f~~~~~L~~H~~~   34 (46)
T 2ytj_A           11 KPYICAECGKAFTIRSNLIKHQKI   34 (46)
T ss_dssp             CSEECSSSCCEESSHHHHHHHHHH
T ss_pred             cCeECCCCChhhCCHHHHHHHHHH
Confidence            479999999999999999999998

>2ene_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=97.08  E-value=0.00025  Score=48.13  Aligned_cols=24  Identities=21%  Similarity=0.499  Sum_probs=22.6

Q ss_pred             CCCcccccccccCChHHHhhhhhh
Q 015261            2 PGLTCNSCNREFNDDAEQKLHYKS   25 (410)
Q Consensus         2 ~~ftC~~C~~~F~~~~~qr~H~ks   25 (410)
                      .+|.|..|+..|.....|+.|+++
T Consensus        11 k~~~C~~C~k~f~~~~~L~~H~~~   34 (46)
T 2ene_A           11 KPYKCNECGKVFRHNSYLSRHQRI   34 (46)
T ss_dssp             SSEECSSSCCEESSHHHHHHHHTT
T ss_pred             CCeECCCCCchhCChHHHHHHHhh
Confidence            479999999999999999999998

>2ytk_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=97.07  E-value=0.00022  Score=48.38  Aligned_cols=24  Identities=21%  Similarity=0.621  Sum_probs=22.6

Q ss_pred             CCCcccccccccCChHHHhhhhhh
Q 015261            2 PGLTCNSCNREFNDDAEQKLHYKS   25 (410)
Q Consensus         2 ~~ftC~~C~~~F~~~~~qr~H~ks   25 (410)
                      .+|.|..|+..|.....|+.|+++
T Consensus        11 ~~~~C~~C~k~f~~~~~L~~H~~~   34 (46)
T 2ytk_A           11 KPYKCNECGKVFTQNSHLTNHWRI   34 (46)
T ss_dssp             CSEECSSSCCEESSHHHHHHHHHH
T ss_pred             CCEeCCcCCCccCCHHHHHHHHHH
Confidence            479999999999999999999998

>2ema_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2emc_A

Probab=97.07  E-value=0.00024  Score=48.22  Aligned_cols=24  Identities=25%  Similarity=0.582  Sum_probs=22.7

Q ss_pred             CCCcccccccccCChHHHhhhhhh
Q 015261            2 PGLTCNSCNREFNDDAEQKLHYKS   25 (410)
Q Consensus         2 ~~ftC~~C~~~F~~~~~qr~H~ks   25 (410)
                      .+|.|..|+..|.....|+.|+++
T Consensus        11 k~~~C~~C~k~f~~~~~L~~H~~~   34 (46)
T 2ema_A           11 KRYKCNECGKVFSRNSQLSQHQKI   34 (46)
T ss_dssp             CCEECSSSCCEESSHHHHHHHHTG
T ss_pred             cCcCCCCCcchhCCHHHHHHHHHh
Confidence            479999999999999999999998

>2emy_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=97.07  E-value=0.00022  Score=48.40  Aligned_cols=24  Identities=17%  Similarity=0.490  Sum_probs=22.7

Q ss_pred             CCCcccccccccCChHHHhhhhhh
Q 015261            2 PGLTCNSCNREFNDDAEQKLHYKS   25 (410)
Q Consensus         2 ~~ftC~~C~~~F~~~~~qr~H~ks   25 (410)
                      .+|.|..|+..|.....|+.|+++
T Consensus        11 k~~~C~~C~k~F~~~~~L~~H~~~   34 (46)
T 2emy_A           11 NPYECHECGKAFSRKYQLISHQRT   34 (46)
T ss_dssp             CCEECSSSCCEESSHHHHHHHHHH
T ss_pred             cCcCCCCCCcccCcHHHHHHHHHH
Confidence            479999999999999999999998

>2em9_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2yrh_A

Probab=97.06  E-value=0.00029  Score=47.69  Aligned_cols=24  Identities=17%  Similarity=0.358  Sum_probs=22.6

Q ss_pred             CCCcccccccccCChHHHhhhhhh
Q 015261            2 PGLTCNSCNREFNDDAEQKLHYKS   25 (410)
Q Consensus         2 ~~ftC~~C~~~F~~~~~qr~H~ks   25 (410)
                      .+|.|..|+..|.....|+.|+++
T Consensus        11 k~~~C~~C~k~f~~~~~L~~H~~~   34 (46)
T 2em9_A           11 KPYNCKECGKSFRWASCLLKHQRV   34 (46)
T ss_dssp             CSEECSSSCCEESSHHHHHHHGGG
T ss_pred             cCeECCccccccCChHHHHHHHHH
Confidence            479999999999999999999998

>2ytm_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=97.06  E-value=0.00024  Score=48.38  Aligned_cols=24  Identities=21%  Similarity=0.537  Sum_probs=22.7

Q ss_pred             CCCcccccccccCChHHHhhhhhh
Q 015261            2 PGLTCNSCNREFNDDAEQKLHYKS   25 (410)
Q Consensus         2 ~~ftC~~C~~~F~~~~~qr~H~ks   25 (410)
                      .+|.|..|+..|.....|+.|+++
T Consensus        11 k~~~C~~C~k~f~~~~~L~~H~~~   34 (46)
T 2ytm_A           11 KPYKCMECGKAFGDNSSCTQHQRL   34 (46)
T ss_dssp             CSSSBTTTTBCCSSHHHHHHHHHH
T ss_pred             CCcCCCCCCchhCCHHHHHHHHHH
Confidence            479999999999999999999998

>2emx_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=97.05  E-value=0.00023  Score=47.78  Aligned_cols=24  Identities=17%  Similarity=0.542  Sum_probs=22.7

Q ss_pred             CCCcccccccccCChHHHhhhhhh
Q 015261            2 PGLTCNSCNREFNDDAEQKLHYKS   25 (410)
Q Consensus         2 ~~ftC~~C~~~F~~~~~qr~H~ks   25 (410)
                      .+|.|..|+..|.....|+.|+++
T Consensus         9 k~~~C~~C~k~f~~~~~L~~H~~~   32 (44)
T 2emx_A            9 KPFGCSCCEKAFSSKSYLLVHQQT   32 (44)
T ss_dssp             CCEECSSSSCEESSHHHHHHHHHH
T ss_pred             cCccCCCCCcccCCHHHHHHHHHH
Confidence            479999999999999999999998

>2eme_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=97.05  E-value=0.00029  Score=47.68  Aligned_cols=24  Identities=25%  Similarity=0.470  Sum_probs=22.6

Q ss_pred             CCCcccccccccCChHHHhhhhhh
Q 015261            2 PGLTCNSCNREFNDDAEQKLHYKS   25 (410)
Q Consensus         2 ~~ftC~~C~~~F~~~~~qr~H~ks   25 (410)
                      .+|.|..|+..|.....|+.|+++
T Consensus        11 k~~~C~~C~k~f~~~~~L~~H~~~   34 (46)
T 2eme_A           11 KPYVCDYCGKAFGLSAELVRHQRI   34 (46)
T ss_dssp             CSEECSSSCCEESSHHHHHHHHGG
T ss_pred             CCeECCCCChhhCCHHHHHHHHHh
Confidence            479999999999999999999997

>2ysp_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=97.04  E-value=0.00027  Score=47.94  Aligned_cols=24  Identities=21%  Similarity=0.569  Sum_probs=22.7

Q ss_pred             CCCcccccccccCChHHHhhhhhh
Q 015261            2 PGLTCNSCNREFNDDAEQKLHYKS   25 (410)
Q Consensus         2 ~~ftC~~C~~~F~~~~~qr~H~ks   25 (410)
                      .+|.|..|+..|.....|+.|+++
T Consensus        11 k~~~C~~C~k~f~~~~~L~~H~~~   34 (46)
T 2ysp_A           11 KPYKCEKCGKGYNSKFNLDMHQKV   34 (46)
T ss_dssp             CSEEETTTTEEESCHHHHHHHHTT
T ss_pred             CCeECCCCCCccCCHHHHHHHHHh
Confidence            479999999999999999999998

>2el6_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens}

Probab=97.04  E-value=0.0003  Score=47.77  Aligned_cols=24  Identities=17%  Similarity=0.513  Sum_probs=22.7

Q ss_pred             CCCcccccccccCChHHHhhhhhh
Q 015261            2 PGLTCNSCNREFNDDAEQKLHYKS   25 (410)
Q Consensus         2 ~~ftC~~C~~~F~~~~~qr~H~ks   25 (410)
                      .+|.|..|+..|.....|+.|+++
T Consensus        11 k~~~C~~C~k~f~~~~~L~~H~~~   34 (46)
T 2el6_A           11 NPYKCSQCEKSFSGKLRLLVHQRM   34 (46)
T ss_dssp             CSEECSSSSCEESSHHHHHHHHGG
T ss_pred             CCeECCCCCcccCCHHHHHHHHHH
Confidence            479999999999999999999998

>2ytd_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=97.03  E-value=0.00025  Score=48.13  Aligned_cols=24  Identities=17%  Similarity=0.499  Sum_probs=22.6

Q ss_pred             CCCcccccccccCChHHHhhhhhh
Q 015261            2 PGLTCNSCNREFNDDAEQKLHYKS   25 (410)
Q Consensus         2 ~~ftC~~C~~~F~~~~~qr~H~ks   25 (410)
                      .+|.|..|+..|.....|+.|+++
T Consensus        11 k~~~C~~C~k~f~~~~~L~~H~~~   34 (46)
T 2ytd_A           11 KPYKCSECGKAFHRHTHLNEHRRI   34 (46)
T ss_dssp             CSEECSSSCCEESSHHHHHHHHHH
T ss_pred             cCeECCCCCCeeCChHHHHHHHHH
Confidence            479999999999999999999998

>2enc_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=97.03  E-value=0.00029  Score=47.75  Aligned_cols=24  Identities=21%  Similarity=0.549  Sum_probs=22.6

Q ss_pred             CCCcccccccccCChHHHhhhhhh
Q 015261            2 PGLTCNSCNREFNDDAEQKLHYKS   25 (410)
Q Consensus         2 ~~ftC~~C~~~F~~~~~qr~H~ks   25 (410)
                      .+|.|..|+..|.....|+.|+++
T Consensus        11 k~~~C~~C~k~f~~~~~L~~H~~~   34 (46)
T 2enc_A           11 KPFKCEECGKGFYTNSQCYSHQRS   34 (46)
T ss_dssp             CSEECSSSCCEESSHHHHHHHHHH
T ss_pred             CCcCCCCCCCcCCChHHHHHHHHH
Confidence            479999999999999999999998

>2en8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=97.03  E-value=0.00029  Score=47.65  Aligned_cols=24  Identities=21%  Similarity=0.548  Sum_probs=22.6

Q ss_pred             CCCcccccccccCChHHHhhhhhh
Q 015261            2 PGLTCNSCNREFNDDAEQKLHYKS   25 (410)
Q Consensus         2 ~~ftC~~C~~~F~~~~~qr~H~ks   25 (410)
                      .+|.|..|+..|.....|+.|+++
T Consensus        11 ~~~~C~~C~k~f~~~~~L~~H~~~   34 (46)
T 2en8_A           11 KSHTCDECGKNFCYISALRIHQRV   34 (46)
T ss_dssp             SSEECTTTCCEESSHHHHHHHHTT
T ss_pred             CCeECCCcCcccCCHHHHHHHHHH
Confidence            479999999999999999999987

>2emm_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=97.03  E-value=0.00026  Score=47.96  Aligned_cols=24  Identities=25%  Similarity=0.477  Sum_probs=22.6

Q ss_pred             CCCcccccccccCChHHHhhhhhh
Q 015261            2 PGLTCNSCNREFNDDAEQKLHYKS   25 (410)
Q Consensus         2 ~~ftC~~C~~~F~~~~~qr~H~ks   25 (410)
                      .+|.|..|+..|.....|+.|+++
T Consensus        11 k~~~C~~C~k~f~~~~~L~~H~~~   34 (46)
T 2emm_A           11 RPHKCNECGKSFIQSAHLIQHQRI   34 (46)
T ss_dssp             CSEECSSSCCEESSHHHHHHHHHH
T ss_pred             CCeeCCCCChhhCCHHHHHHHHHH
Confidence            479999999999999999999998

>2en6_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=97.02  E-value=0.00024  Score=48.19  Aligned_cols=24  Identities=21%  Similarity=0.559  Sum_probs=22.7

Q ss_pred             CCCcccccccccCChHHHhhhhhh
Q 015261            2 PGLTCNSCNREFNDDAEQKLHYKS   25 (410)
Q Consensus         2 ~~ftC~~C~~~F~~~~~qr~H~ks   25 (410)
                      .+|.|..|+..|.....|+.|+++
T Consensus        11 ~~~~C~~C~k~f~~~~~L~~H~~~   34 (46)
T 2en6_A           11 KPYGCNECGKTFSQKSILSAHQRT   34 (46)
T ss_dssp             CCEEETTTTEEESSHHHHHHHHHH
T ss_pred             cCeECCCCCcccCchHHHHHHHHH
Confidence            479999999999999999999998

>2epw_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=97.02  E-value=0.00028  Score=47.73  Aligned_cols=24  Identities=17%  Similarity=0.475  Sum_probs=22.6

Q ss_pred             CCCcccccccccCChHHHhhhhhh
Q 015261            2 PGLTCNSCNREFNDDAEQKLHYKS   25 (410)
Q Consensus         2 ~~ftC~~C~~~F~~~~~qr~H~ks   25 (410)
                      .+|.|..|+..|.....|+.|+++
T Consensus        11 k~~~C~~C~k~F~~~~~L~~H~~~   34 (46)
T 2epw_A           11 KPCKCTECGKAFCWKSQLIMHQRT   34 (46)
T ss_dssp             CSEECSSSCCEESSSHHHHHHHHH
T ss_pred             CCeeCCCCCCccCCHHHHHHHHHH
Confidence            479999999999999999999998

>2ep0_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=97.02  E-value=0.00031  Score=47.61  Aligned_cols=24  Identities=17%  Similarity=0.523  Sum_probs=22.6

Q ss_pred             CCCcccccccccCChHHHhhhhhh
Q 015261            2 PGLTCNSCNREFNDDAEQKLHYKS   25 (410)
Q Consensus         2 ~~ftC~~C~~~F~~~~~qr~H~ks   25 (410)
                      .+|.|..|+..|.....|+.|+++
T Consensus        11 ~~~~C~~C~k~f~~~~~L~~H~~~   34 (46)
T 2ep0_A           11 KPYKCDVCHKSFRYGSSLTVHQRI   34 (46)
T ss_dssp             CSEECSSSCCEESSHHHHHHHHTT
T ss_pred             CCeeCcccCcccCChHHHHHHHHH
Confidence            479999999999999999999998

>2em2_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=97.01  E-value=0.0003  Score=47.81  Aligned_cols=27  Identities=19%  Similarity=0.288  Sum_probs=25.3

Q ss_pred             CCcccCCCCCCCCChhHHhhhhhhhhc
Q 015261          181 DPACCFMCDLPHDAIENCMVHMHKCHG  207 (410)
Q Consensus       181 ~p~~ClfC~~~f~~~~~~~~HM~~~Hg  207 (410)
                      .|+.|.+|++.|.....|..||.+|+|
T Consensus        11 k~~~C~~C~k~f~~~~~L~~H~~~H~~   37 (46)
T 2em2_A           11 KPFKCKECGKAFRQNIHLASHLRIHTG   37 (46)
T ss_dssp             CSEECSSSCCEESSHHHHHHHHHHHCC
T ss_pred             CCEECCcCCchhCCHHHHHHHHHHhCC
Confidence            689999999999999999999999776

>2emh_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=97.01  E-value=0.00021  Score=48.52  Aligned_cols=24  Identities=25%  Similarity=0.505  Sum_probs=22.6

Q ss_pred             CCCcccccccccCChHHHhhhhhh
Q 015261            2 PGLTCNSCNREFNDDAEQKLHYKS   25 (410)
Q Consensus         2 ~~ftC~~C~~~F~~~~~qr~H~ks   25 (410)
                      .+|.|..|+..|.....|+.|+++
T Consensus        11 k~~~C~~C~k~F~~~~~L~~H~~~   34 (46)
T 2emh_A           11 RPYICTVCGKAFTDRSNLIKHQKI   34 (46)
T ss_dssp             CSEECTTTCCEESSHHHHHHHHHH
T ss_pred             CCcCCCCCCchhCCHHHHHHHHHh
Confidence            479999999999999999999997

>2epx_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=97.01  E-value=0.0004  Score=47.09  Aligned_cols=24  Identities=17%  Similarity=0.477  Sum_probs=22.5

Q ss_pred             CCCcccccccccCChHHHhhhhh-h
Q 015261            2 PGLTCNSCNREFNDDAEQKLHYK-S   25 (410)
Q Consensus         2 ~~ftC~~C~~~F~~~~~qr~H~k-s   25 (410)
                      .+|.|..|+..|.....|+.|++ +
T Consensus        11 k~~~C~~C~k~F~~~~~L~~H~~~~   35 (47)
T 2epx_A           11 KPYECIECGKAFIQNTSLIRHWRYY   35 (47)
T ss_dssp             CSBCCSSSCCCBSSHHHHHHHHTTT
T ss_pred             CCEECCccCchhCChHHHHHHhHhh
Confidence            47999999999999999999999 6

>2emp_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=97.00  E-value=0.00022  Score=48.38  Aligned_cols=24  Identities=21%  Similarity=0.401  Sum_probs=22.7

Q ss_pred             CCCcccccccccCChHHHhhhhhh
Q 015261            2 PGLTCNSCNREFNDDAEQKLHYKS   25 (410)
Q Consensus         2 ~~ftC~~C~~~F~~~~~qr~H~ks   25 (410)
                      .+|.|..|+..|.....|+.|+++
T Consensus        11 k~~~C~~C~k~f~~~~~L~~H~~~   34 (46)
T 2emp_A           11 KPYMCNECGKAFSVYSSLTTHQVI   34 (46)
T ss_dssp             CSEECSSSCCEESCHHHHHHHHHH
T ss_pred             cCeECCCCCchhCCHHHHHHHHHH
Confidence            479999999999999999999998

>2en1_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=96.99  E-value=0.00034  Score=47.41  Aligned_cols=24  Identities=17%  Similarity=0.609  Sum_probs=22.6

Q ss_pred             CCCcccccccccCChHHHhhhhhh
Q 015261            2 PGLTCNSCNREFNDDAEQKLHYKS   25 (410)
Q Consensus         2 ~~ftC~~C~~~F~~~~~qr~H~ks   25 (410)
                      .+|.|..|+..|.....|+.|+++
T Consensus        11 ~~~~C~~C~k~f~~~~~L~~H~~~   34 (46)
T 2en1_A           11 KPFKCEECGKRFTQNSQLHSHQRV   34 (46)
T ss_dssp             CSEEETTTTEEESSHHHHHHHGGG
T ss_pred             CCeeCCCCCcccCCHHHHHHHHHH
Confidence            479999999999999999999998

>2yso_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=96.97  E-value=0.0003  Score=47.67  Aligned_cols=24  Identities=17%  Similarity=0.221  Sum_probs=22.6

Q ss_pred             CCCcccccccccCChHHHhhhhhh
Q 015261            2 PGLTCNSCNREFNDDAEQKLHYKS   25 (410)
Q Consensus         2 ~~ftC~~C~~~F~~~~~qr~H~ks   25 (410)
                      .+|.|..|+..|.....|+.|+++
T Consensus        11 ~~~~C~~C~k~f~~~~~L~~H~~~   34 (46)
T 2yso_A           11 KSHQCRECGEIFFQYVSLIEHQVL   34 (46)
T ss_dssp             CCEECTTTCCEESSHHHHHHHHHH
T ss_pred             CCEEccccChhhCCHHHHHHHHHH
Confidence            479999999999999999999998

>2ep3_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=96.95  E-value=0.00038  Score=47.19  Aligned_cols=24  Identities=25%  Similarity=0.515  Sum_probs=22.6

Q ss_pred             CCCcccccccccCChHHHhhhhhh
Q 015261            2 PGLTCNSCNREFNDDAEQKLHYKS   25 (410)
Q Consensus         2 ~~ftC~~C~~~F~~~~~qr~H~ks   25 (410)
                      .+|.|..|+..|.....|+.|+++
T Consensus        11 k~~~C~~C~k~f~~~~~L~~H~~~   34 (46)
T 2ep3_A           11 KPYRCAECGKAFTDRSNLFTHQKI   34 (46)
T ss_dssp             CSEECSSSCCEESSHHHHHHHHTT
T ss_pred             CCeECCCCCchhCCHHHHHHHHHH
Confidence            479999999999999999999998

>2eoo_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=96.95  E-value=0.00025  Score=48.19  Aligned_cols=24  Identities=25%  Similarity=0.541  Sum_probs=22.7

Q ss_pred             CCCcccccccccCChHHHhhhhhh
Q 015261            2 PGLTCNSCNREFNDDAEQKLHYKS   25 (410)
Q Consensus         2 ~~ftC~~C~~~F~~~~~qr~H~ks   25 (410)
                      .+|.|..|+..|.....|+.|+++
T Consensus        11 k~~~C~~C~k~F~~~~~L~~H~~~   34 (46)
T 2eoo_A           11 RPYGCNECGKNFGRHSHLIEHLKR   34 (46)
T ss_dssp             CCEECSSSCCEESSHHHHHHHHHH
T ss_pred             CCEEccccCcccCCHHHHHHHHHH
Confidence            479999999999999999999998

>2em8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=96.92  E-value=0.00027  Score=48.00  Aligned_cols=24  Identities=13%  Similarity=0.486  Sum_probs=22.7

Q ss_pred             CCCcccccccccCChHHHhhhhhh
Q 015261            2 PGLTCNSCNREFNDDAEQKLHYKS   25 (410)
Q Consensus         2 ~~ftC~~C~~~F~~~~~qr~H~ks   25 (410)
                      .+|.|..|+..|.....|+.|+++
T Consensus        11 k~~~C~~C~k~f~~~~~L~~H~~~   34 (46)
T 2em8_A           11 KPYKCVECGKGYKRRLDLDFHQRV   34 (46)
T ss_dssp             CSEECSSSCCEESSHHHHHHHHHH
T ss_pred             CCeECcccCchhCCHHHHHHHHHH
Confidence            479999999999999999999998

>2yu8_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=96.91  E-value=0.00026  Score=47.98  Aligned_cols=24  Identities=21%  Similarity=0.555  Sum_probs=22.6

Q ss_pred             CCCcccccccccCChHHHhhhhhh
Q 015261            2 PGLTCNSCNREFNDDAEQKLHYKS   25 (410)
Q Consensus         2 ~~ftC~~C~~~F~~~~~qr~H~ks   25 (410)
                      .+|.|..|+..|.....|+.|+++
T Consensus        11 k~~~C~~C~k~f~~~~~L~~H~~~   34 (46)
T 2yu8_A           11 KPYKCNECGKVFTQNSHLARHRRV   34 (46)
T ss_dssp             SSEECSSSCCEESSSHHHHHHTHH
T ss_pred             CCeECCcCCchhCCHHHHHHHHHh
Confidence            479999999999999999999998

>1klr_A Zinc finger Y-chromosomal protein; transcription; NMR {Synthetic} SCOP: g.37.1.1 PDB: 5znf_A 1kls_A 1xrz_A* 7znf_A

Probab=96.91  E-value=0.00056  Score=41.14  Aligned_cols=26  Identities=19%  Similarity=0.396  Sum_probs=24.5

Q ss_pred             CcccCCCCCCCCChhHHhhhhhhhhc
Q 015261          182 PACCFMCDLPHDAIENCMVHMHKCHG  207 (410)
Q Consensus       182 p~~ClfC~~~f~~~~~~~~HM~~~Hg  207 (410)
                      |+.|..|++.|.....|..||..|||
T Consensus         2 ~~~C~~C~k~f~~~~~l~~H~~~h~~   27 (30)
T 1klr_A            2 TYQCQYCEFRSADSSNLKTHIKTKHS   27 (30)
T ss_dssp             CCCCSSSSCCCSCSHHHHHHHHHHTS
T ss_pred             CccCCCCCCccCCHHHHHHHHHHHcc
Confidence            68999999999999999999999887

>2ytt_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=96.89  E-value=0.00029  Score=47.88  Aligned_cols=24  Identities=17%  Similarity=0.533  Sum_probs=22.7

Q ss_pred             CCCcccccccccCChHHHhhhhhh
Q 015261            2 PGLTCNSCNREFNDDAEQKLHYKS   25 (410)
Q Consensus         2 ~~ftC~~C~~~F~~~~~qr~H~ks   25 (410)
                      .+|.|..|+..|.....|+.|+++
T Consensus        11 k~~~C~~C~k~f~~~~~L~~H~~~   34 (46)
T 2ytt_A           11 KPYQCSECGKSFSGSYRLTQHWIT   34 (46)
T ss_dssp             CTTCCSSSCCCCSSHHHHHHHHTH
T ss_pred             CCeeCCCCCcccCCHHHHHHHHHH
Confidence            479999999999999999999998

>2m0e_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=96.89  E-value=0.00059  Score=40.67  Aligned_cols=26  Identities=19%  Similarity=0.326  Sum_probs=24.3

Q ss_pred             CcccCCCCCCCCChhHHhhhhhhhhc
Q 015261          182 PACCFMCDLPHDAIENCMVHMHKCHG  207 (410)
Q Consensus       182 p~~ClfC~~~f~~~~~~~~HM~~~Hg  207 (410)
                      |+.|..|++.|.....|..||.+|+|
T Consensus         2 ~~~C~~C~~~f~~~~~l~~H~~~h~~   27 (29)
T 2m0e_A            2 EHKCPHCDKKFNQVGNLKAHLKIHIA   27 (29)
T ss_dssp             CCCCSSCCCCCCTTTHHHHHHHHHHS
T ss_pred             CCcCCCCCcccCCHHHHHHHHHHhcc
Confidence            68999999999999999999999876

>2eon_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=96.89  E-value=0.0007  Score=45.97  Aligned_cols=27  Identities=19%  Similarity=0.362  Sum_probs=25.3

Q ss_pred             CCcccCCCCCCCCChhHHhhhhhhhhc
Q 015261          181 DPACCFMCDLPHDAIENCMVHMHKCHG  207 (410)
Q Consensus       181 ~p~~ClfC~~~f~~~~~~~~HM~~~Hg  207 (410)
                      .|+.|..|++.|.+...|..||.+|++
T Consensus        11 k~~~C~~C~k~f~~~~~L~~H~~~H~~   37 (46)
T 2eon_A           11 KPYKCQVCGKAFRVSSHLVQHHSVHSG   37 (46)
T ss_dssp             CSCBCSSSCCBCSSHHHHHHHTTTTTS
T ss_pred             cccCCCCCCcccCcHHHHHHHHHhcCC
Confidence            689999999999999999999999776

>2enf_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=96.89  E-value=0.00071  Score=45.75  Aligned_cols=27  Identities=19%  Similarity=0.241  Sum_probs=25.3

Q ss_pred             CCcccCCCCCCCCChhHHhhhhhhhhc
Q 015261          181 DPACCFMCDLPHDAIENCMVHMHKCHG  207 (410)
Q Consensus       181 ~p~~ClfC~~~f~~~~~~~~HM~~~Hg  207 (410)
                      .|+.|..|++.|.....|..||.+|+|
T Consensus        11 k~~~C~~C~k~F~~~~~L~~H~~~H~~   37 (46)
T 2enf_A           11 KPYKCNECGKVFTQNSHLVRHRGIHTG   37 (46)
T ss_dssp             CSCBCSSSCCBCSSHHHHHHHHTTTTT
T ss_pred             cCeECCCCCcccCCHHHHHHHHHhhCC
Confidence            689999999999999999999999776

>2yti_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=96.87  E-value=0.00075  Score=45.65  Aligned_cols=27  Identities=19%  Similarity=0.213  Sum_probs=25.3

Q ss_pred             CCcccCCCCCCCCChhHHhhhhhhhhc
Q 015261          181 DPACCFMCDLPHDAIENCMVHMHKCHG  207 (410)
Q Consensus       181 ~p~~ClfC~~~f~~~~~~~~HM~~~Hg  207 (410)
                      .|+.|..|++.|.+...|..||.+|+|
T Consensus        11 k~~~C~~C~k~F~~~~~L~~H~~~H~~   37 (46)
T 2yti_A           11 KPYKCNECGKVFTQNSHLARHRGIHTG   37 (46)
T ss_dssp             CTTCCSSSCCCCSSHHHHHHHHTTTSC
T ss_pred             cCeECCCCCcccCChhHHHHHhHhcCC
Confidence            689999999999999999999999776

>1ard_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 PDB: 1arf_A 1are_A

Probab=96.86  E-value=0.00065  Score=40.68  Aligned_cols=26  Identities=15%  Similarity=0.248  Sum_probs=24.2

Q ss_pred             CcccCCCCCCCCChhHHhhhhhhhhc
Q 015261          182 PACCFMCDLPHDAIENCMVHMHKCHG  207 (410)
Q Consensus       182 p~~ClfC~~~f~~~~~~~~HM~~~Hg  207 (410)
                      |+.|..|++.|.....|..||..|+|
T Consensus         2 ~~~C~~C~~~f~~~~~l~~H~~~h~~   27 (29)
T 1ard_A            2 SFVCEVCTRAFARQEHLKRHYRSHTN   27 (29)
T ss_dssp             CCBCTTTCCBCSSHHHHHHHHHHHSC
T ss_pred             CeECCCCCcccCCHHHHHHHHHHhcC
Confidence            68999999999999999999999765

>2kvf_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=96.84  E-value=0.00037  Score=41.74  Aligned_cols=27  Identities=19%  Similarity=0.360  Sum_probs=24.4

Q ss_pred             CCcccCCCCCCCCChhHHhhhhhhhhc
Q 015261          181 DPACCFMCDLPHDAIENCMVHMHKCHG  207 (410)
Q Consensus       181 ~p~~ClfC~~~f~~~~~~~~HM~~~Hg  207 (410)
                      .|+.|..|++.|.....|..||+.|+|
T Consensus         2 k~~~C~~C~k~f~~~~~l~~H~~~h~~   28 (28)
T 2kvf_A            2 RPYSCSVCGKRFSLKHQMETHYRVHTG   28 (28)
T ss_dssp             CSEECSSSCCEESCHHHHHHHHTTSCC
T ss_pred             cCccCCCCCcccCCHHHHHHHHHhcCC
Confidence            478999999999999999999998764

>2emg_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=96.84  E-value=0.00081  Score=45.47  Aligned_cols=27  Identities=22%  Similarity=0.422  Sum_probs=25.3

Q ss_pred             CCcccCCCCCCCCChhHHhhhhhhhhc
Q 015261          181 DPACCFMCDLPHDAIENCMVHMHKCHG  207 (410)
Q Consensus       181 ~p~~ClfC~~~f~~~~~~~~HM~~~Hg  207 (410)
                      .|+.|..|++.|.+...|..||.+|+|
T Consensus        11 k~~~C~~C~k~f~~~~~L~~H~~~H~~   37 (46)
T 2emg_A           11 NPFICSECGKVFTHKTNLIIHQKIHTG   37 (46)
T ss_dssp             CSCBCTTTCCBCSSHHHHHHHHTTTSC
T ss_pred             CCEECCccCcccCCHHHHHHHHHHhCC
Confidence            689999999999999999999999776

>2eoh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=96.83  E-value=0.00081  Score=45.55  Aligned_cols=27  Identities=22%  Similarity=0.272  Sum_probs=25.2

Q ss_pred             CCcccCCCCCCCCChhHHhhhhhhhhc
Q 015261          181 DPACCFMCDLPHDAIENCMVHMHKCHG  207 (410)
Q Consensus       181 ~p~~ClfC~~~f~~~~~~~~HM~~~Hg  207 (410)
                      .|+.|.+|++.|.....|..||.+|++
T Consensus        11 k~~~C~~C~k~f~~~~~L~~H~~~H~~   37 (46)
T 2eoh_A           11 KPYECKECRKTFIQIGHLNQHKRVHTG   37 (46)
T ss_dssp             CSCCCSSSCCCCSSHHHHHHHHHHCSS
T ss_pred             CCcCCCCcCchhCCHHHHHHHHHHhCC
Confidence            689999999999999999999999776

>1rim_A E6APC2 peptide; E6-binding domain, zinc finger, human papillomavirus, HPV E6 protein, de novo protein; NMR {Synthetic} SCOP: k.12.1.1

Probab=96.83  E-value=0.0007  Score=42.75  Aligned_cols=26  Identities=12%  Similarity=0.075  Sum_probs=24.2

Q ss_pred             CcccCCCCCCCCChhHHhhhhhhhhc
Q 015261          182 PACCFMCDLPHDAIENCMVHMHKCHG  207 (410)
Q Consensus       182 p~~ClfC~~~f~~~~~~~~HM~~~Hg  207 (410)
                      |+.|..|++.|.....|..||.+|.|
T Consensus         2 p~~C~~C~k~F~~~~~L~~H~~~H~~   27 (33)
T 1rim_A            2 KFACPECPKRFMRSDHLSKHITLHEL   27 (33)
T ss_dssp             CCCCSSSCCCCSSHHHHHHHHHHHTT
T ss_pred             cccCCCCCchhCCHHHHHHHHHHhCC
Confidence            68999999999999999999998766

>2ytb_A Zinc finger protein 32; zinc-finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=96.82  E-value=0.00074  Score=44.58  Aligned_cols=27  Identities=22%  Similarity=0.427  Sum_probs=25.2

Q ss_pred             CCcccCCCCCCCCChhHHhhhhhhhhc
Q 015261          181 DPACCFMCDLPHDAIENCMVHMHKCHG  207 (410)
Q Consensus       181 ~p~~ClfC~~~f~~~~~~~~HM~~~Hg  207 (410)
                      .|+.|..|++.|.+...|..||.+|+|
T Consensus        10 k~~~C~~C~k~f~~~~~L~~H~~~H~~   36 (42)
T 2ytb_A           10 KPYRCDQCGKAFSQKGSLIVHIRVHTG   36 (42)
T ss_dssp             CSBCCTTTTCCBSSHHHHHTTGGGTSC
T ss_pred             CCeeCCCccchhCCHHHHHHHHHHhCC
Confidence            689999999999999999999999776

>2em2_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=96.82  E-value=0.00048  Score=46.75  Aligned_cols=24  Identities=17%  Similarity=0.553  Sum_probs=22.7

Q ss_pred             CCCcccccccccCChHHHhhhhhh
Q 015261            2 PGLTCNSCNREFNDDAEQKLHYKS   25 (410)
Q Consensus         2 ~~ftC~~C~~~F~~~~~qr~H~ks   25 (410)
                      .+|.|..|+..|.....|+.|+++
T Consensus        11 k~~~C~~C~k~f~~~~~L~~H~~~   34 (46)
T 2em2_A           11 KPFKCKECGKAFRQNIHLASHLRI   34 (46)
T ss_dssp             CSEECSSSCCEESSHHHHHHHHHH
T ss_pred             CCEECCcCCchhCCHHHHHHHHHH
Confidence            479999999999999999999998

>2en9_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=96.81  E-value=0.00096  Score=45.18  Aligned_cols=27  Identities=19%  Similarity=0.228  Sum_probs=25.3

Q ss_pred             CCcccCCCCCCCCChhHHhhhhhhhhc
Q 015261          181 DPACCFMCDLPHDAIENCMVHMHKCHG  207 (410)
Q Consensus       181 ~p~~ClfC~~~f~~~~~~~~HM~~~Hg  207 (410)
                      .|+.|..|++.|.+...|..||.+|+|
T Consensus        11 k~~~C~~C~k~F~~~~~L~~H~~~H~~   37 (46)
T 2en9_A           11 KLFKCNECKKTFTQSSSLTVHQRIHTG   37 (46)
T ss_dssp             CCCBCTTTCCBCSSHHHHHHHHHHHTS
T ss_pred             CCEECCccCcccCCHHHHHHHHHHcCC
Confidence            689999999999999999999999776

>2ep1_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=96.79  E-value=0.0011  Score=44.73  Aligned_cols=27  Identities=22%  Similarity=0.274  Sum_probs=25.2

Q ss_pred             CCcccCCCCCCCCChhHHhhhhhhhhc
Q 015261          181 DPACCFMCDLPHDAIENCMVHMHKCHG  207 (410)
Q Consensus       181 ~p~~ClfC~~~f~~~~~~~~HM~~~Hg  207 (410)
                      .|+.|.+|++.|.+...|..||.+|+|
T Consensus        11 k~~~C~~C~k~f~~~~~L~~H~~~H~~   37 (46)
T 2ep1_A           11 KPYECSDCGKSFIKKSQLHVHQRIHTG   37 (46)
T ss_dssp             CSSCCSSSCCCCSSHHHHHHHHGGGSS
T ss_pred             CCcCCCCCCchhCCHHHHHHHHHHhCC
Confidence            679999999999999999999999776

>2eos_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=96.78  E-value=0.00082  Score=44.51  Aligned_cols=27  Identities=19%  Similarity=0.427  Sum_probs=25.3

Q ss_pred             CCcccCCCCCCCCChhHHhhhhhhhhc
Q 015261          181 DPACCFMCDLPHDAIENCMVHMHKCHG  207 (410)
Q Consensus       181 ~p~~ClfC~~~f~~~~~~~~HM~~~Hg  207 (410)
                      .|+.|..|++.|.+...|..||.+|+|
T Consensus        10 k~~~C~~C~k~f~~~~~L~~H~~~H~~   36 (42)
T 2eos_A           10 KPYPCEICGTRFRHLQTLKSHLRIHTG   36 (42)
T ss_dssp             CCBCCSSSCCCBSSHHHHHHHTTTTSC
T ss_pred             CCEECCCCCCccCCHHHHHHHHHhcCC
Confidence            689999999999999999999999776

>2yrm_A B-cell lymphoma 6 protein; ZF-C2H2, zinc binding, DNA binding, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=96.76  E-value=0.001  Score=44.56  Aligned_cols=27  Identities=19%  Similarity=0.274  Sum_probs=25.3

Q ss_pred             CCcccCCCCCCCCChhHHhhhhhhhhc
Q 015261          181 DPACCFMCDLPHDAIENCMVHMHKCHG  207 (410)
Q Consensus       181 ~p~~ClfC~~~f~~~~~~~~HM~~~Hg  207 (410)
                      .|+.|..|++.|.....|..||.+|+|
T Consensus         9 k~~~C~~C~k~f~~~~~L~~H~~~H~~   35 (43)
T 2yrm_A            9 GAFFCNECDCRFSEEASLKRHTLQTHS   35 (43)
T ss_dssp             CCBCCSSSCCCBSSHHHHHHHHHHHTC
T ss_pred             CCEECCCCCCeeCChHHHHHHHHhhCC
Confidence            689999999999999999999999876

>1p7a_A BF3, BKLF, kruppel-like factor 3; classical zinc finger, transcription factor, DNA binding protein; NMR {Mus musculus} SCOP: g.37.1.1 PDB: 1u85_A 1u86_A

Probab=96.76  E-value=0.00086  Score=42.93  Aligned_cols=28  Identities=21%  Similarity=0.456  Sum_probs=25.2

Q ss_pred             CCCCCcccccCcCCccCChHHHHHHHhh
Q 015261           61 NATPMTYSCGLCGKGYRSSKALAQHLNS   88 (410)
Q Consensus        61 ~~~~~~~~C~~C~K~f~s~~~l~~Hl~s   88 (410)
                      +.++++|.|.+|+|.|.....|..|++.
T Consensus         6 h~~~k~~~C~~C~k~f~~~~~l~~H~~~   33 (37)
T 1p7a_A            6 STGIKPFQCPDCDRSFSRSDHLALHRKR   33 (37)
T ss_dssp             TCCSSSBCCTTTCCCBSSHHHHHHHHGG
T ss_pred             CCCCCCccCCCCCcccCcHHHHHHHHHH
Confidence            4577899999999999999999999875

>2yte_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=96.75  E-value=0.001  Score=43.86  Aligned_cols=27  Identities=15%  Similarity=0.235  Sum_probs=25.1

Q ss_pred             CCcccCCCCCCCCChhHHhhhhhhhhc
Q 015261          181 DPACCFMCDLPHDAIENCMVHMHKCHG  207 (410)
Q Consensus       181 ~p~~ClfC~~~f~~~~~~~~HM~~~Hg  207 (410)
                      .|+.|..|++.|.+...|..||.+|+|
T Consensus         9 k~~~C~~C~k~f~~~~~L~~H~~~H~~   35 (42)
T 2yte_A            9 KPYSCAECKETFSDNNRLVQHQKMHTV   35 (42)
T ss_dssp             CSCBCTTTCCBCSSHHHHHHHHHHTSC
T ss_pred             CCeECCCCCCccCCHHHHHHHHHHhCC
Confidence            679999999999999999999999766

>2en7_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=96.75  E-value=0.00098  Score=44.41  Aligned_cols=27  Identities=19%  Similarity=0.429  Sum_probs=25.1

Q ss_pred             CCcccCCCCCCCCChhHHhhhhhhhhc
Q 015261          181 DPACCFMCDLPHDAIENCMVHMHKCHG  207 (410)
Q Consensus       181 ~p~~ClfC~~~f~~~~~~~~HM~~~Hg  207 (410)
                      .|+.|..|++.|.+...|..||.+|+|
T Consensus        11 k~~~C~~C~k~f~~~~~L~~H~~~H~~   37 (44)
T 2en7_A           11 KPYVCNECGKAFRSKSYLIIHTRTHTG   37 (44)
T ss_dssp             SSSCCTTTCCCCSSHHHHHHHHTTTCC
T ss_pred             cCeECCCCCCccCCHHHHHHHhhhcCC
Confidence            679999999999999999999998776

>2eq2_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=96.75  E-value=0.0012  Score=44.57  Aligned_cols=28  Identities=18%  Similarity=0.237  Sum_probs=25.6

Q ss_pred             CCCcccCCCCCCCCChhHHhhhhhhhhc
Q 015261          180 FDPACCFMCDLPHDAIENCMVHMHKCHG  207 (410)
Q Consensus       180 i~p~~ClfC~~~f~~~~~~~~HM~~~Hg  207 (410)
                      ..|+.|..|++.|.+...|..||.+|+|
T Consensus        10 ~k~~~C~~C~k~f~~~~~L~~H~~~H~~   37 (46)
T 2eq2_A           10 GKPYQCNECGKAFSQTSKLARHQRVHTG   37 (46)
T ss_dssp             SCSSSCCSSCCCCSSHHHHHHHGGGGCC
T ss_pred             CCCeECCCCCcccCCHHHHHHHHHHcCC
Confidence            3689999999999999999999999776

>2em6_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=96.74  E-value=0.0011  Score=44.95  Aligned_cols=27  Identities=15%  Similarity=0.202  Sum_probs=25.2

Q ss_pred             CCcccCCCCCCCCChhHHhhhhhhhhc
Q 015261          181 DPACCFMCDLPHDAIENCMVHMHKCHG  207 (410)
Q Consensus       181 ~p~~ClfC~~~f~~~~~~~~HM~~~Hg  207 (410)
                      .|+.|..|++.|.....|..||.+|+|
T Consensus        11 k~~~C~~C~k~f~~~~~L~~H~~~H~~   37 (46)
T 2em6_A           11 KCYKCDVCGKEFSQSSHLQTHQRVHTG   37 (46)
T ss_dssp             CCCBCSSSCCBCSSHHHHHHHHTTTSS
T ss_pred             CCeECCCCCcccCCHHHHHHHHHHcCC
Confidence            689999999999999999999998776

>2eom_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=96.73  E-value=0.0011  Score=44.95  Aligned_cols=27  Identities=19%  Similarity=0.167  Sum_probs=25.2

Q ss_pred             CCcccCCCCCCCCChhHHhhhhhhhhc
Q 015261          181 DPACCFMCDLPHDAIENCMVHMHKCHG  207 (410)
Q Consensus       181 ~p~~ClfC~~~f~~~~~~~~HM~~~Hg  207 (410)
                      .|+.|..|++.|.....|..||.+|++
T Consensus        11 k~~~C~~C~k~F~~~~~L~~H~~~H~~   37 (46)
T 2eom_A           11 RGHRCSDCGKFFLQASNFIQHRRIHTG   37 (46)
T ss_dssp             SSCCCSSSCCCCSSHHHHHHHHHHHSS
T ss_pred             CCcCCCCCCCeeCChHHHHHHHHHhCC
Confidence            679999999999999999999999776

>2enh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=96.73  E-value=0.001  Score=45.09  Aligned_cols=27  Identities=19%  Similarity=0.305  Sum_probs=25.3

Q ss_pred             CCcccCCCCCCCCChhHHhhhhhhhhc
Q 015261          181 DPACCFMCDLPHDAIENCMVHMHKCHG  207 (410)
Q Consensus       181 ~p~~ClfC~~~f~~~~~~~~HM~~~Hg  207 (410)
                      .|+.|..|++.|.....|..||.+|++
T Consensus        11 k~~~C~~C~k~F~~~~~L~~H~~~H~~   37 (46)
T 2enh_A           11 KPYECDVCRKAFSHHASLTQHQRVHSG   37 (46)
T ss_dssp             SSCBCTTTCCBCSSSHHHHHHGGGSCC
T ss_pred             CCcCCCCcCchhCCHHHHHHHHHHhCC
Confidence            689999999999999999999999776

>2eou_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=96.72  E-value=0.0011  Score=44.32  Aligned_cols=27  Identities=15%  Similarity=0.149  Sum_probs=25.2

Q ss_pred             CCcccCCCCCCCCChhHHhhhhhhhhc
Q 015261          181 DPACCFMCDLPHDAIENCMVHMHKCHG  207 (410)
Q Consensus       181 ~p~~ClfC~~~f~~~~~~~~HM~~~Hg  207 (410)
                      .|+.|..|++.|.....|..||.+|.+
T Consensus        11 ~~~~C~~C~k~f~~~~~L~~H~~~H~~   37 (44)
T 2eou_A           11 TTSECQECGKIFRHSSLLIEHQALHAG   37 (44)
T ss_dssp             CCCCCTTTCCCCSSHHHHHHHHHHHTT
T ss_pred             cCeECCCCCcccCCHHHHHHHHHHHCC
Confidence            689999999999999999999999776

>1yui_A GAGA-factor; complex (DNA-binding protein/DNA), chromatin remodeling, DNA binding protein/DNA complex; HET: DNA; NMR {Drosophila melanogaster} SCOP: g.37.1.1 PDB: 1yuj_A*

Probab=96.72  E-value=0.00038  Score=49.20  Aligned_cols=26  Identities=27%  Similarity=0.493  Sum_probs=23.8

Q ss_pred             CCCcccccCcCCccCChHHHHHHHhh
Q 015261           63 TPMTYSCGLCGKGYRSSKALAQHLNS   88 (410)
Q Consensus        63 ~~~~~~C~~C~K~f~s~~~l~~Hl~s   88 (410)
                      ++.+|.|.+|+|.|.....|..|++.
T Consensus        21 ~~k~~~C~~C~k~f~~~~~L~~H~~~   46 (54)
T 1yui_A           21 SEQPATCPICYAVIRQSRNLRRHLEL   46 (54)
T ss_dssp             SSCCEECTTTCCEESSHHHHHHHHHH
T ss_pred             CCCCccCCCCCcccCCHHHHHHHHHH
Confidence            56789999999999999999999975

>2eq1_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=96.72  E-value=0.0012  Score=44.68  Aligned_cols=27  Identities=26%  Similarity=0.333  Sum_probs=25.3

Q ss_pred             CCcccCCCCCCCCChhHHhhhhhhhhc
Q 015261          181 DPACCFMCDLPHDAIENCMVHMHKCHG  207 (410)
Q Consensus       181 ~p~~ClfC~~~f~~~~~~~~HM~~~Hg  207 (410)
                      .|+.|.+|++.|.....|..||.+|+|
T Consensus        11 k~~~C~~C~k~f~~~~~L~~H~~~H~~   37 (46)
T 2eq1_A           11 KPYKCNECGKAFRAHSNLTTHQVIHTG   37 (46)
T ss_dssp             CCCCCTTTTCCCSSHHHHHHHHTTTCC
T ss_pred             CCeECCcCChhhCCHHHHHHHHHHhCC
Confidence            689999999999999999999999776

>2yth_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=96.70  E-value=0.0013  Score=44.57  Aligned_cols=27  Identities=19%  Similarity=0.261  Sum_probs=25.2

Q ss_pred             CCcccCCCCCCCCChhHHhhhhhhhhc
Q 015261          181 DPACCFMCDLPHDAIENCMVHMHKCHG  207 (410)
Q Consensus       181 ~p~~ClfC~~~f~~~~~~~~HM~~~Hg  207 (410)
                      .|+.|..|++.|.+...|..||.+|+|
T Consensus        11 k~~~C~~C~k~f~~~~~L~~H~~~H~~   37 (46)
T 2yth_A           11 KPFQCEECGKRFTQNSHLHSHQRVHTG   37 (46)
T ss_dssp             SSBCCSSSCCCBSSHHHHHHHGGGGTT
T ss_pred             cCCCCCCCCcccCCHHHHHHHHHhcCC
Confidence            679999999999999999999999776

>2ept_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=96.70  E-value=0.00071  Score=44.57  Aligned_cols=27  Identities=15%  Similarity=0.176  Sum_probs=25.2

Q ss_pred             CCcccCCCCCCCCChhHHhhhhhhhhc
Q 015261          181 DPACCFMCDLPHDAIENCMVHMHKCHG  207 (410)
Q Consensus       181 ~p~~ClfC~~~f~~~~~~~~HM~~~Hg  207 (410)
                      .|+.|..|++.|.....|..||.+|+|
T Consensus         9 k~~~C~~C~k~f~~~~~L~~H~~~H~~   35 (41)
T 2ept_A            9 RVYECQECGKSFRQKGSLTLHERIHTG   35 (41)
T ss_dssp             CCEECSSSCCEESSHHHHHHHGGGCCC
T ss_pred             CCeECCCCCCCcCCHHHHHHHHHHhCC
Confidence            689999999999999999999999776

>2m0d_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=96.70  E-value=0.00057  Score=41.11  Aligned_cols=27  Identities=19%  Similarity=0.313  Sum_probs=24.8

Q ss_pred             CCcccCCCCCCCCChhHHhhhhhhhhc
Q 015261          181 DPACCFMCDLPHDAIENCMVHMHKCHG  207 (410)
Q Consensus       181 ~p~~ClfC~~~f~~~~~~~~HM~~~Hg  207 (410)
                      .|+.|..|++.|.....|..||..|+|
T Consensus         2 k~~~C~~C~~~f~~~~~l~~H~~~h~~   28 (30)
T 2m0d_A            2 KPYQCDYCGRSFSDPTSKMRHLETHDT   28 (30)
T ss_dssp             CCEECTTTCCEESCHHHHHHHHHTTCC
T ss_pred             cCccCCCCCcccCCHHHHHHHHHHhcc
Confidence            478999999999999999999998766

>2elx_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}

Probab=96.69  E-value=0.00093  Score=42.02  Aligned_cols=27  Identities=33%  Similarity=0.588  Sum_probs=24.4

Q ss_pred             CCCCcccccCcCCccCChHHHHHHHhh
Q 015261           62 ATPMTYSCGLCGKGYRSSKALAQHLNS   88 (410)
Q Consensus        62 ~~~~~~~C~~C~K~f~s~~~l~~Hl~s   88 (410)
                      .++++|.|.+|+|.|.....|..|++.
T Consensus         3 ~~~k~~~C~~C~k~f~~~~~L~~H~~~   29 (35)
T 2elx_A            3 SGSSGYVCALCLKKFVSSIRLRSHIRE   29 (35)
T ss_dssp             CCCCSEECSSSCCEESSHHHHHHHHHH
T ss_pred             CCCCCeECCCCcchhCCHHHHHHHHHH
Confidence            467889999999999999999999875

>1rik_A E6APC1 peptide; E6-binding domain, zinc finger, human papillomavirus, HPV E6 protein, de novo protein; NMR {Synthetic} SCOP: k.12.1.1 PDB: 1sp1_A 1va3_A

Probab=96.67  E-value=0.00064  Score=40.81  Aligned_cols=26  Identities=12%  Similarity=0.171  Sum_probs=24.2

Q ss_pred             CcccCCCCCCCCChhHHhhhhhhhhc
Q 015261          182 PACCFMCDLPHDAIENCMVHMHKCHG  207 (410)
Q Consensus       182 p~~ClfC~~~f~~~~~~~~HM~~~Hg  207 (410)
                      |+.|..|++.|.+...|..||.+|+|
T Consensus         2 ~~~C~~C~k~f~~~~~l~~H~~~H~~   27 (29)
T 1rik_A            2 KFACPECPKRFMRSDHLTLHILLHEN   27 (29)
T ss_dssp             CEECSSSSCEESCSHHHHHHHTGGGS
T ss_pred             CccCCCCCchhCCHHHHHHHHHHhcC
Confidence            68999999999999999999999776

>2el5_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eol_A 2emv_A 2eqw_A 2en0_A 2epy_A

Probab=96.67  E-value=0.00079  Score=44.51  Aligned_cols=27  Identities=19%  Similarity=0.422  Sum_probs=25.3

Q ss_pred             CCcccCCCCCCCCChhHHhhhhhhhhc
Q 015261          181 DPACCFMCDLPHDAIENCMVHMHKCHG  207 (410)
Q Consensus       181 ~p~~ClfC~~~f~~~~~~~~HM~~~Hg  207 (410)
                      .|+.|..|++.|.+...|..||.+|+|
T Consensus         9 k~~~C~~C~k~f~~~~~L~~H~~~H~~   35 (42)
T 2el5_A            9 NPYECSECGKAFNRKDQLISHQRTHAG   35 (42)
T ss_dssp             CSEECSSSCCEESSHHHHHHHHGGGCC
T ss_pred             CCccCCCcChhhCCHHHHHHHHHhcCC
Confidence            689999999999999999999999776

>2eow_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=96.67  E-value=0.00078  Score=45.48  Aligned_cols=27  Identities=22%  Similarity=0.375  Sum_probs=25.3

Q ss_pred             CCcccCCCCCCCCChhHHhhhhhhhhc
Q 015261          181 DPACCFMCDLPHDAIENCMVHMHKCHG  207 (410)
Q Consensus       181 ~p~~ClfC~~~f~~~~~~~~HM~~~Hg  207 (410)
                      .|+.|.+|++.|.+...|..||.+|+|
T Consensus        11 k~~~C~~C~k~f~~~~~L~~H~~~H~~   37 (46)
T 2eow_A           11 KPYKCNECGKAFRARSSLAIHQATHSG   37 (46)
T ss_dssp             CCEECTTSCCEESSHHHHHHHHHHHCC
T ss_pred             CCeeccccCChhcCHHHHHHHHHHcCC
Confidence            689999999999999999999999776

>2emz_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=96.66  E-value=0.0012  Score=44.70  Aligned_cols=27  Identities=15%  Similarity=0.177  Sum_probs=25.3

Q ss_pred             CCcccCCCCCCCCChhHHhhhhhhhhc
Q 015261          181 DPACCFMCDLPHDAIENCMVHMHKCHG  207 (410)
Q Consensus       181 ~p~~ClfC~~~f~~~~~~~~HM~~~Hg  207 (410)
                      .|+.|.+|++.|.....|..||.+|++
T Consensus        11 k~~~C~~C~k~f~~~~~L~~H~~~H~~   37 (46)
T 2emz_A           11 RPFKCNECGKGFGRRSHLAGHLRLHSR   37 (46)
T ss_dssp             CSCCCSSSCCCCSSHHHHHHHHHHHHH
T ss_pred             CCeECCCCCcccCCHHHHHHHHHHhCC
Confidence            689999999999999999999999776

>1srk_A Zinc finger protein ZFPM1; classical zinc finger, transcription; NMR {Mus musculus} SCOP: g.37.1.1

Probab=96.66  E-value=0.0011  Score=41.86  Aligned_cols=28  Identities=18%  Similarity=0.498  Sum_probs=24.9

Q ss_pred             CCCCCcccccCcCCccCChHHHHHHHhh
Q 015261           61 NATPMTYSCGLCGKGYRSSKALAQHLNS   88 (410)
Q Consensus        61 ~~~~~~~~C~~C~K~f~s~~~l~~Hl~s   88 (410)
                      +.++++|.|.+|+|.|.....|..|++.
T Consensus         2 H~~~k~~~C~~C~k~f~~~~~l~~H~~~   29 (35)
T 1srk_A            2 SSGKRPFVCRICLSAFTTKANCARHLKV   29 (35)
T ss_dssp             CSCCSCEECSSSCCEESSHHHHHHHHGG
T ss_pred             CCCCcCeeCCCCCcccCCHHHHHHHHHH
Confidence            3467899999999999999999999875

>2eor_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=96.65  E-value=0.00083  Score=45.33  Aligned_cols=27  Identities=19%  Similarity=0.199  Sum_probs=25.3

Q ss_pred             CCcccCCCCCCCCChhHHhhhhhhhhc
Q 015261          181 DPACCFMCDLPHDAIENCMVHMHKCHG  207 (410)
Q Consensus       181 ~p~~ClfC~~~f~~~~~~~~HM~~~Hg  207 (410)
                      .|+.|..|++.|.+...|..||.+|+|
T Consensus        11 ~~~~C~~C~k~f~~~~~L~~H~~~H~~   37 (46)
T 2eor_A           11 KPYNCEECGKAFIHDSQLQEHQRIHTG   37 (46)
T ss_dssp             CSEECTTTCCEESSHHHHHHHHHHHHS
T ss_pred             cCccCCCCCCCcCCHHHHHHHHHhcCC
Confidence            689999999999999999999999876

>2ytf_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=96.64  E-value=0.00079  Score=45.43  Aligned_cols=27  Identities=26%  Similarity=0.492  Sum_probs=25.3

Q ss_pred             CCcccCCCCCCCCChhHHhhhhhhhhc
Q 015261          181 DPACCFMCDLPHDAIENCMVHMHKCHG  207 (410)
Q Consensus       181 ~p~~ClfC~~~f~~~~~~~~HM~~~Hg  207 (410)
                      .|+.|.+|++.|.+...|..||.+|+|
T Consensus        11 k~~~C~~C~k~f~~~~~L~~H~~~H~~   37 (46)
T 2ytf_A           11 KPFECSECQKAFNTKSNLIVHQRTHTG   37 (46)
T ss_dssp             CSEECSSSCCEESSHHHHHHHHHTSCS
T ss_pred             CCcCCCCCCcccCCHHHHHHHHHHhCC
Confidence            689999999999999999999999776

>2lvt_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, transcription; NMR {Homo sapiens}

Probab=95.66  E-value=0.00031  Score=42.48  Aligned_cols=26  Identities=23%  Similarity=0.606  Sum_probs=24.1

Q ss_pred             CcccCCCCCCCCChhHHhhhhhhhhc
Q 015261          182 PACCFMCDLPHDAIENCMVHMHKCHG  207 (410)
Q Consensus       182 p~~ClfC~~~f~~~~~~~~HM~~~Hg  207 (410)
                      |+.|..|++.|.....|..||.+|+|
T Consensus         2 ~~~C~~C~k~f~~~~~l~~H~~~H~~   27 (29)
T 2lvt_A            2 PCQCVMCGKAFTQASSLIAHVRQHTG   27 (29)
Confidence            68999999999999999999998775

>2em4_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=96.63  E-value=0.00083  Score=45.49  Aligned_cols=27  Identities=19%  Similarity=0.413  Sum_probs=25.2

Q ss_pred             CCcccCCCCCCCCChhHHhhhhhhhhc
Q 015261          181 DPACCFMCDLPHDAIENCMVHMHKCHG  207 (410)
Q Consensus       181 ~p~~ClfC~~~f~~~~~~~~HM~~~Hg  207 (410)
                      .|+.|.+|++.|.....|..||.+|+|
T Consensus        11 k~~~C~~C~k~f~~~~~L~~H~~~H~~   37 (46)
T 2em4_A           11 RPYECIECGKAFKTKSSLICHRRSHTG   37 (46)
T ss_dssp             SSEECSSSCCEESSHHHHHHHHHHHSS
T ss_pred             cCcCCCCCCCccCCHHHHHHHHHhcCC
Confidence            689999999999999999999999776

>2kvh_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=96.63  E-value=0.00099  Score=39.53  Aligned_cols=24  Identities=33%  Similarity=0.722  Sum_probs=22.0

Q ss_pred             CcccccCcCCccCChHHHHHHHhh
Q 015261           65 MTYSCGLCGKGYRSSKALAQHLNS   88 (410)
Q Consensus        65 ~~~~C~~C~K~f~s~~~l~~Hl~s   88 (410)
                      ++|.|..|+|.|.....|..|++.
T Consensus         2 k~~~C~~C~k~f~~~~~l~~H~~~   25 (27)
T 2kvh_A            2 KPFSCSLCPQRSRDFSAMTKHLRT   25 (27)
T ss_dssp             CCEECSSSSCEESSHHHHHHHHHH
T ss_pred             cCccCCCcChhhCCHHHHHHHHHH
Confidence            579999999999999999999874

>2ent_A Krueppel-like factor 15; zinc binding, transcription factor, adipogenesis, CLCNKA, chloride channel Ka, rhodopsin, IRBP; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=96.61  E-value=0.00089  Score=45.51  Aligned_cols=27  Identities=19%  Similarity=0.358  Sum_probs=24.9

Q ss_pred             CCcccC--CCCCCCCChhHHhhhhhhhhc
Q 015261          181 DPACCF--MCDLPHDAIENCMVHMHKCHG  207 (410)
Q Consensus       181 ~p~~Cl--fC~~~f~~~~~~~~HM~~~Hg  207 (410)
                      .|+.|.  .|++.|.....|..||.+|.|
T Consensus        11 k~~~C~~~~C~k~f~~~~~L~~H~~~H~~   39 (48)
T 2ent_A           11 KPFACTWPGCGWRFSRSDELSRHRRSHSG   39 (48)
T ss_dssp             CCEECCSSSCCCEESSHHHHHHHHTTSCC
T ss_pred             CCeECCCCCCCCccCCHHHHHHHHHHhCC
Confidence            689998  899999999999999999766

>2epc_A Zinc finger protein 32; zinc finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2yta_A

Probab=96.60  E-value=0.001  Score=43.88  Aligned_cols=27  Identities=22%  Similarity=0.417  Sum_probs=25.2

Q ss_pred             CCcccCCCCCCCCChhHHhhhhhhhhc
Q 015261          181 DPACCFMCDLPHDAIENCMVHMHKCHG  207 (410)
Q Consensus       181 ~p~~ClfC~~~f~~~~~~~~HM~~~Hg  207 (410)
                      .|+.|..|++.|.+...|..||.+|+|
T Consensus        10 ~~~~C~~C~k~f~~~~~l~~H~~~H~~   36 (42)
T 2epc_A           10 TPYLCGQCGKSFTQRGSLAVHQRSCSQ   36 (42)
T ss_dssp             CCEECSSSCCEESSHHHHHHHHHHTTC
T ss_pred             CCeECCCCCcccCCHHHHHHHhhhcCC
Confidence            689999999999999999999999776

>2m0f_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=96.59  E-value=0.00075  Score=40.28  Aligned_cols=26  Identities=23%  Similarity=0.365  Sum_probs=24.2

Q ss_pred             CcccCCCCCCCCChhHHhhhhhhhhc
Q 015261          182 PACCFMCDLPHDAIENCMVHMHKCHG  207 (410)
Q Consensus       182 p~~ClfC~~~f~~~~~~~~HM~~~Hg  207 (410)
                      |+.|.+|++.|.+...|..||.+|+|
T Consensus         2 ~~~C~~C~k~f~~~~~l~~H~~~H~~   27 (29)
T 2m0f_A            2 PLKCRECGKQFTTSGNLKRHLRIHSG   27 (29)
T ss_dssp             CEECTTTSCEESCHHHHHHHHHHHHT
T ss_pred             CccCCCCCCccCChhHHHHHHHHhcC
Confidence            68899999999999999999999776

>2eof_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=96.59  E-value=0.00094  Score=44.50  Aligned_cols=27  Identities=30%  Similarity=0.512  Sum_probs=25.2

Q ss_pred             CCcccCCCCCCCCChhHHhhhhhhhhc
Q 015261          181 DPACCFMCDLPHDAIENCMVHMHKCHG  207 (410)
Q Consensus       181 ~p~~ClfC~~~f~~~~~~~~HM~~~Hg  207 (410)
                      .|+.|.+|++.|.+...|..||.+|+|
T Consensus        11 k~~~C~~C~k~f~~~~~L~~H~~~H~~   37 (44)
T 2eof_A           11 KPYECNECQKAFNTKSNLMVHQRTHTG   37 (44)
T ss_dssp             CSEECTTTCCEESCHHHHHHHHHHTTT
T ss_pred             CCeECCCCCcccCCHhHHHHHHHHhCC
Confidence            689999999999999999999999776

>2emi_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=96.59  E-value=0.00098  Score=45.04  Aligned_cols=27  Identities=15%  Similarity=0.156  Sum_probs=25.3

Q ss_pred             CCcccCCCCCCCCChhHHhhhhhhhhc
Q 015261          181 DPACCFMCDLPHDAIENCMVHMHKCHG  207 (410)
Q Consensus       181 ~p~~ClfC~~~f~~~~~~~~HM~~~Hg  207 (410)
                      .|+.|.+|++.|.....|..||.+|+|
T Consensus        11 ~~~~C~~C~k~F~~~~~L~~H~~~H~~   37 (46)
T 2emi_A           11 RHYECSECGKAFIQKSTLSMHQRIHRG   37 (46)
T ss_dssp             CCEECSSSCCEESSHHHHHHHHGGGCS
T ss_pred             CCCCCCCCCcccCCHHHHHHHHhHhCC
Confidence            689999999999999999999999776

>2lvr_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, classical zinc finger, transcription; NMR {Homo sapiens}

Probab=95.59  E-value=0.00035  Score=42.25  Aligned_cols=27  Identities=19%  Similarity=0.363  Sum_probs=24.8

Q ss_pred             CCcccCCCCCCCCChhHHhhhhhhhhc
Q 015261          181 DPACCFMCDLPHDAIENCMVHMHKCHG  207 (410)
Q Consensus       181 ~p~~ClfC~~~f~~~~~~~~HM~~~Hg  207 (410)
                      .|+.|..|++.|.+...|..||.+|+|
T Consensus         2 k~~~C~~C~k~f~~~~~l~~H~~~h~~   28 (30)
T 2lvr_A            2 KPYVCIHCQRQFADPGALQRHVRIHTG   28 (30)
Confidence            478999999999999999999999776

>2en2_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=96.56  E-value=0.00098  Score=44.04  Aligned_cols=27  Identities=19%  Similarity=0.325  Sum_probs=25.2

Q ss_pred             CCcccCCCCCCCCChhHHhhhhhhhhc
Q 015261          181 DPACCFMCDLPHDAIENCMVHMHKCHG  207 (410)
Q Consensus       181 ~p~~ClfC~~~f~~~~~~~~HM~~~Hg  207 (410)
                      .|+.|..|++.|.+...|..||.+|.|
T Consensus        10 k~~~C~~C~k~f~~~~~L~~H~~~H~~   36 (42)
T 2en2_A           10 KPYKCETCGARFVQVAHLRAHVLIHTG   36 (42)
T ss_dssp             CSEECTTTCCEESSHHHHHHHTHHHHS
T ss_pred             CCEeCCCcChhhCCHHHHHHHHHHcCC
Confidence            689999999999999999999998776

>2em3_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=96.56  E-value=0.001  Score=45.00  Aligned_cols=27  Identities=19%  Similarity=0.356  Sum_probs=25.3

Q ss_pred             CCcccCCCCCCCCChhHHhhhhhhhhc
Q 015261          181 DPACCFMCDLPHDAIENCMVHMHKCHG  207 (410)
Q Consensus       181 ~p~~ClfC~~~f~~~~~~~~HM~~~Hg  207 (410)
                      .|+.|.+|++.|.+...|..||.+|+|
T Consensus        11 ~~~~C~~C~k~F~~~~~L~~H~~~H~~   37 (46)
T 2em3_A           11 KPYECKVCSKAFTQKAHLAQHQKTHTG   37 (46)
T ss_dssp             CSEECSSSCCEESSHHHHHHHHHHHCC
T ss_pred             cCeECCCCCcccCCHHHHHHHHHHhCC
Confidence            689999999999999999999999776

>2yts_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=96.56  E-value=0.0011  Score=44.63  Aligned_cols=27  Identities=19%  Similarity=0.229  Sum_probs=25.2

Q ss_pred             CCcccCCCCCCCCChhHHhhhhhhhhc
Q 015261          181 DPACCFMCDLPHDAIENCMVHMHKCHG  207 (410)
Q Consensus       181 ~p~~ClfC~~~f~~~~~~~~HM~~~Hg  207 (410)
                      .|+.|.+|++.|.+...|..||.+|+|
T Consensus        11 k~~~C~~C~k~f~~~~~L~~H~~~H~~   37 (46)
T 2yts_A           11 KPYICNECGKSFIQKSHLNRHRRIHTG   37 (46)
T ss_dssp             CSEECSSSCCEESSHHHHHHHGGGTSS
T ss_pred             cCEECCCCChhhCChHHHHHHHHhcCC
Confidence            689999999999999999999998766

>2elt_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=96.56  E-value=0.0013  Score=41.66  Aligned_cols=28  Identities=21%  Similarity=0.409  Sum_probs=25.1

Q ss_pred             CCCCCcccccCcCCccCChHHHHHHHhh
Q 015261           61 NATPMTYSCGLCGKGYRSSKALAQHLNS   88 (410)
Q Consensus        61 ~~~~~~~~C~~C~K~f~s~~~l~~Hl~s   88 (410)
                      +.++++|.|.+|+|.|.....|..|++.
T Consensus         4 h~~~k~~~C~~C~k~f~~~~~l~~H~~~   31 (36)
T 2elt_A            4 GSSGKPYKCPQCSYASAIKANLNVHLRK   31 (36)
T ss_dssp             SCCCCSEECSSSSCEESSHHHHHHHHHH
T ss_pred             CCCCCCCCCCCCCcccCCHHHHHHHHHH
Confidence            4567899999999999999999999975

>2ytp_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=96.55  E-value=0.001  Score=45.03  Aligned_cols=27  Identities=15%  Similarity=0.231  Sum_probs=25.3

Q ss_pred             CCcccCCCCCCCCChhHHhhhhhhhhc
Q 015261          181 DPACCFMCDLPHDAIENCMVHMHKCHG  207 (410)
Q Consensus       181 ~p~~ClfC~~~f~~~~~~~~HM~~~Hg  207 (410)
                      .|+.|.+|++.|.....|..||.+|+|
T Consensus        11 k~~~C~~C~k~F~~~~~L~~H~~~H~~   37 (46)
T 2ytp_A           11 RHYECSECGKAFARKSTLIMHQRIHTG   37 (46)
T ss_dssp             CCEECSSSCCEESSHHHHHHHHTTTSC
T ss_pred             CCeECCcCCcccCCHHHHHHHHHHhCC
Confidence            689999999999999999999999776

>2emj_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eoi_A

Probab=96.55  E-value=0.0011  Score=44.97  Aligned_cols=27  Identities=19%  Similarity=0.309  Sum_probs=25.2

Q ss_pred             CCcccCCCCCCCCChhHHhhhhhhhhc
Q 015261          181 DPACCFMCDLPHDAIENCMVHMHKCHG  207 (410)
Q Consensus       181 ~p~~ClfC~~~f~~~~~~~~HM~~~Hg  207 (410)
                      .|+.|.+|++.|.+...|..||.+|.|
T Consensus        11 k~~~C~~C~k~F~~~~~L~~H~~~H~~   37 (46)
T 2emj_A           11 KPFECAECGKSFSISSQLATHQRIHTG   37 (46)
T ss_dssp             CSEECSSSSCEESSHHHHHHHHHHHTT
T ss_pred             CCEECCCCCcccCCHHHHHHHHHHhCC
Confidence            689999999999999999999999776

>2elr_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=96.53  E-value=0.0014  Score=41.56  Aligned_cols=27  Identities=15%  Similarity=0.165  Sum_probs=25.0

Q ss_pred             CCcccCCCCCCCCChhHHhhhhhhhhc
Q 015261          181 DPACCFMCDLPHDAIENCMVHMHKCHG  207 (410)
Q Consensus       181 ~p~~ClfC~~~f~~~~~~~~HM~~~Hg  207 (410)
                      .|+.|..|++.|.+...|..||.+|++
T Consensus         8 ~~~~C~~C~k~f~~~~~l~~H~~~H~~   34 (36)
T 2elr_A            8 KTHLCDMCGKKFKSKGTLKSHKLLHTA   34 (36)
T ss_dssp             SSCBCTTTCCBCSSHHHHHHHHHHHSS
T ss_pred             CCeecCcCCCCcCchHHHHHHHHHhcC
Confidence            679999999999999999999998765

>1p7a_A BF3, BKLF, kruppel-like factor 3; classical zinc finger, transcription factor, DNA binding protein; NMR {Mus musculus} SCOP: g.37.1.1 PDB: 1u85_A 1u86_A

Probab=96.53  E-value=0.0015  Score=41.79  Aligned_cols=25  Identities=20%  Similarity=0.550  Sum_probs=22.6

Q ss_pred             CCccccccCCCCcccCCHHHHHHHHHhc
Q 015261          232 RDFMCLYCNDRCHPFNSLEAVRKHMEAK  259 (410)
Q Consensus       232 ~~~~Cl~C~~~gk~F~s~~alr~HM~~k  259 (410)
                      .+|.|..|+   +.|.+...|+.||+..
T Consensus        10 k~~~C~~C~---k~f~~~~~l~~H~~~H   34 (37)
T 1p7a_A           10 KPFQCPDCD---RSFSRSDHLALHRKRH   34 (37)
T ss_dssp             SSBCCTTTC---CCBSSHHHHHHHHGGG
T ss_pred             CCccCCCCC---cccCcHHHHHHHHHHh
Confidence            489999999   9999999999999863

>2elq_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=96.53  E-value=0.0014  Score=41.71  Aligned_cols=28  Identities=29%  Similarity=0.608  Sum_probs=25.1

Q ss_pred             CCCCCcccccCcCCccCChHHHHHHHhh
Q 015261           61 NATPMTYSCGLCGKGYRSSKALAQHLNS   88 (410)
Q Consensus        61 ~~~~~~~~C~~C~K~f~s~~~l~~Hl~s   88 (410)
                      +.++++|.|.+|++.|.....|..|++.
T Consensus         4 h~~~k~~~C~~C~k~f~~~~~l~~H~~~   31 (36)
T 2elq_A            4 GSSGKPFKCSLCEYATRSKSNLKAHMNR   31 (36)
T ss_dssp             SCCCCSEECSSSSCEESCHHHHHHHHHH
T ss_pred             CCCCCCccCCCCCchhCCHHHHHHHHHH
Confidence            4567899999999999999999999875

>2elx_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}

Probab=96.52  E-value=0.00081  Score=42.32  Aligned_cols=27  Identities=19%  Similarity=0.324  Sum_probs=25.3

Q ss_pred             CCcccCCCCCCCCChhHHhhhhhhhhc
Q 015261          181 DPACCFMCDLPHDAIENCMVHMHKCHG  207 (410)
Q Consensus       181 ~p~~ClfC~~~f~~~~~~~~HM~~~Hg  207 (410)
                      .|+.|..|++.|.....|..||..|+|
T Consensus         6 k~~~C~~C~k~f~~~~~L~~H~~~h~~   32 (35)
T 2elx_A            6 SGYVCALCLKKFVSSIRLRSHIREVHG   32 (35)
T ss_dssp             CSEECSSSCCEESSHHHHHHHHHHTSC
T ss_pred             CCeECCCCcchhCCHHHHHHHHHHHcC
Confidence            679999999999999999999999876

>2yrj_A Zinc finger protein 473; C2H2-type zinc finger, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=96.52  E-value=0.0011  Score=44.69  Aligned_cols=27  Identities=22%  Similarity=0.295  Sum_probs=25.3

Q ss_pred             CCcccCCCCCCCCChhHHhhhhhhhhc
Q 015261          181 DPACCFMCDLPHDAIENCMVHMHKCHG  207 (410)
Q Consensus       181 ~p~~ClfC~~~f~~~~~~~~HM~~~Hg  207 (410)
                      .|+.|.+|++.|.....|..||.+|+|
T Consensus        11 ~~~~C~~C~k~f~~~~~L~~H~~~H~~   37 (46)
T 2yrj_A           11 KPYRCGECGKAFAQKANLTQHQRIHTG   37 (46)
T ss_dssp             CCEECSSSCCEESSHHHHHHHHTTTSS
T ss_pred             CCeECCCCCCccCCHHHHHHHHHHcCC
Confidence            689999999999999999999999776

>2elo_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=96.51  E-value=0.0013  Score=42.12  Aligned_cols=28  Identities=21%  Similarity=0.691  Sum_probs=25.2

Q ss_pred             CCCCCcccccCcCCccCChHHHHHHHhh
Q 015261           61 NATPMTYSCGLCGKGYRSSKALAQHLNS   88 (410)
Q Consensus        61 ~~~~~~~~C~~C~K~f~s~~~l~~Hl~s   88 (410)
                      +.++++|.|.+|+|.|.....|..|++.
T Consensus         4 h~~~k~~~C~~C~k~f~~~~~l~~H~~~   31 (37)
T 2elo_A            4 GSSGRSYSCPVCEKSFSEDRLIKSHIKT   31 (37)
T ss_dssp             CCCCCCCEETTTTEECSSHHHHHHHHHH
T ss_pred             CCCCCCcCCCCCCCccCCHHHHHHHHHH
Confidence            4567899999999999999999999975

>2elr_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=96.51  E-value=0.0018  Score=41.05  Aligned_cols=28  Identities=29%  Similarity=0.536  Sum_probs=24.9

Q ss_pred             CCCCCcccccCcCCccCChHHHHHHHhh
Q 015261           61 NATPMTYSCGLCGKGYRSSKALAQHLNS   88 (410)
Q Consensus        61 ~~~~~~~~C~~C~K~f~s~~~l~~Hl~s   88 (410)
                      +.++++|.|.+|+|.|.....|..|++.
T Consensus         4 h~~~~~~~C~~C~k~f~~~~~l~~H~~~   31 (36)
T 2elr_A            4 GSSGKTHLCDMCGKKFKSKGTLKSHKLL   31 (36)
T ss_dssp             CCCCSSCBCTTTCCBCSSHHHHHHHHHH
T ss_pred             CCCCCCeecCcCCCCcCchHHHHHHHHH
Confidence            4567889999999999999999999875

>2yto_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=96.50  E-value=0.0011  Score=44.91  Aligned_cols=27  Identities=19%  Similarity=0.347  Sum_probs=25.3

Q ss_pred             CCcccCCCCCCCCChhHHhhhhhhhhc
Q 015261          181 DPACCFMCDLPHDAIENCMVHMHKCHG  207 (410)
Q Consensus       181 ~p~~ClfC~~~f~~~~~~~~HM~~~Hg  207 (410)
                      .|+.|.+|++.|.....|..||.+|+|
T Consensus        11 k~~~C~~C~k~f~~~~~L~~H~~~H~~   37 (46)
T 2yto_A           11 KPYKCSDCGKAFTRKSGLHIHQQSHTG   37 (46)
T ss_dssp             CCEECSSSCCEESSHHHHHHHHHHHTC
T ss_pred             CCEECcccCCccCCHhHHHHHHHHcCC
Confidence            689999999999999999999999776

>2eoj_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=96.48  E-value=0.0011  Score=44.32  Aligned_cols=27  Identities=19%  Similarity=0.396  Sum_probs=25.3

Q ss_pred             CCcccCCCCCCCCChhHHhhhhhhhhc
Q 015261          181 DPACCFMCDLPHDAIENCMVHMHKCHG  207 (410)
Q Consensus       181 ~p~~ClfC~~~f~~~~~~~~HM~~~Hg  207 (410)
                      .|+.|..|++.|.....|..||.+|+|
T Consensus        11 k~~~C~~C~k~f~~~~~L~~H~~~H~~   37 (44)
T 2eoj_A           11 NPYECCECGKVFSRKDQLVSHQKTHSG   37 (44)
T ss_dssp             CSCEETTTTEECSSHHHHHHHHTTSSS
T ss_pred             cCeeCCCCCCccCCHHHHHHHHHHcCC
Confidence            689999999999999999999999776

>2elo_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=96.47  E-value=0.00092  Score=42.78  Aligned_cols=27  Identities=15%  Similarity=0.274  Sum_probs=25.4

Q ss_pred             CCcccCCCCCCCCChhHHhhhhhhhhc
Q 015261          181 DPACCFMCDLPHDAIENCMVHMHKCHG  207 (410)
Q Consensus       181 ~p~~ClfC~~~f~~~~~~~~HM~~~Hg  207 (410)
                      .|+.|..|++.|.....|..||.+|+|
T Consensus         8 k~~~C~~C~k~f~~~~~l~~H~~~h~~   34 (37)
T 2elo_A            8 RSYSCPVCEKSFSEDRLIKSHIKTNHP   34 (37)
T ss_dssp             CCCEETTTTEECSSHHHHHHHHHHHCS
T ss_pred             CCcCCCCCCCccCCHHHHHHHHHHHcC
Confidence            689999999999999999999999876

>2elv_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=96.47  E-value=0.0015  Score=41.53  Aligned_cols=28  Identities=14%  Similarity=0.557  Sum_probs=24.9

Q ss_pred             CCCCCcccccCcCCccCChHHHHHHHhh
Q 015261           61 NATPMTYSCGLCGKGYRSSKALAQHLNS   88 (410)
Q Consensus        61 ~~~~~~~~C~~C~K~f~s~~~l~~Hl~s   88 (410)
                      +.++++|.|.+|+|.|.....|..|++.
T Consensus         4 h~~~k~~~C~~C~k~f~~~~~l~~H~~~   31 (36)
T 2elv_A            4 GSSGLLYDCHICERKFKNELDRDRHMLV   31 (36)
T ss_dssp             SCCCCCEECSSSCCEESSHHHHHHHHTT
T ss_pred             CCCCCCeECCCCCCccCCHHHHHHHHHH
Confidence            3467899999999999999999999975

>1fv5_A First zinc finger of U-shaped; CCHC, protein interaction, transcription; NMR {Drosophila melanogaster} SCOP: g.37.1.2 PDB: 1y0j_B 2l6z_B

Probab=96.46  E-value=0.0012  Score=43.71  Aligned_cols=25  Identities=28%  Similarity=0.627  Sum_probs=23.4

Q ss_pred             CCCCcccccCcCCccCChHHHHHHH
Q 015261           62 ATPMTYSCGLCGKGYRSSKALAQHL   86 (410)
Q Consensus        62 ~~~~~~~C~~C~K~f~s~~~l~~Hl   86 (410)
                      .++++|.|..|+|.|.....|..|+
T Consensus         4 ~gekp~~C~~CgK~F~~~s~L~~H~   28 (36)
T 1fv5_A            4 LKPARFMCLPCGIAFSSPSTLEAHQ   28 (36)
T ss_dssp             SSCCCCEETTTTEECSCHHHHHHHH
T ss_pred             CCccCeECCCCCCccCCHhHccCcC
Confidence            4678999999999999999999998

>2kvg_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=96.46  E-value=0.0011  Score=39.60  Aligned_cols=24  Identities=29%  Similarity=0.679  Sum_probs=22.0

Q ss_pred             CcccccCcCCccCChHHHHHHHhh
Q 015261           65 MTYSCGLCGKGYRSSKALAQHLNS   88 (410)
Q Consensus        65 ~~~~C~~C~K~f~s~~~l~~Hl~s   88 (410)
                      ++|.|..|+|.|.....|..|++.
T Consensus         2 k~~~C~~C~k~f~~~~~l~~H~~~   25 (27)
T 2kvg_A            2 APYRCPLCRAGCPSLASMQAHMRG   25 (27)
T ss_dssp             CTEEETTTTEEESCHHHHHHHHTT
T ss_pred             cCcCCCCCCcccCCHHHHHHHHHh
Confidence            579999999999999999999864

>2kvh_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=96.46  E-value=0.00087  Score=39.81  Aligned_cols=25  Identities=16%  Similarity=0.412  Sum_probs=23.0

Q ss_pred             CCcccCCCCCCCCChhHHhhhhhhh
Q 015261          181 DPACCFMCDLPHDAIENCMVHMHKC  205 (410)
Q Consensus       181 ~p~~ClfC~~~f~~~~~~~~HM~~~  205 (410)
                      .|+.|..|++.|.+...|..||++|
T Consensus         2 k~~~C~~C~k~f~~~~~l~~H~~~H   26 (27)
T 2kvh_A            2 KPFSCSLCPQRSRDFSAMTKHLRTH   26 (27)
T ss_dssp             CCEECSSSSCEESSHHHHHHHHHHC
T ss_pred             cCccCCCcChhhCCHHHHHHHHHHc
Confidence            4789999999999999999999875

>2emb_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=96.45  E-value=0.0014  Score=43.76  Aligned_cols=27  Identities=11%  Similarity=0.218  Sum_probs=25.1

Q ss_pred             CCcccCCCCCCCCChhHHhhhhhhhhc
Q 015261          181 DPACCFMCDLPHDAIENCMVHMHKCHG  207 (410)
Q Consensus       181 ~p~~ClfC~~~f~~~~~~~~HM~~~Hg  207 (410)
                      .|+.|..|++.|.+...|..||.+|.|
T Consensus        11 k~~~C~~C~k~f~~~~~L~~H~~~H~~   37 (44)
T 2emb_A           11 KRYECSKCQATFNLRKHLIQHQKTHAA   37 (44)
T ss_dssp             SSEECTTTCCEESCHHHHHHHGGGGCC
T ss_pred             CCeECCCCCCccCCHHHHHHHHHHcCC
Confidence            679999999999999999999998766

>2eos_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=96.45  E-value=0.0015  Score=43.20  Aligned_cols=28  Identities=29%  Similarity=0.706  Sum_probs=25.2

Q ss_pred             CCCCCcccccCcCCccCChHHHHHHHhh
Q 015261           61 NATPMTYSCGLCGKGYRSSKALAQHLNS   88 (410)
Q Consensus        61 ~~~~~~~~C~~C~K~f~s~~~l~~Hl~s   88 (410)
                      +.++++|.|.+|+|.|.....|..|++.
T Consensus         6 H~~~k~~~C~~C~k~f~~~~~L~~H~~~   33 (42)
T 2eos_A            6 SGGEKPYPCEICGTRFRHLQTLKSHLRI   33 (42)
T ss_dssp             CSSSCCBCCSSSCCCBSSHHHHHHHTTT
T ss_pred             cCCCCCEECCCCCCccCCHHHHHHHHHh
Confidence            4577899999999999999999999875

>2kvf_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=96.45  E-value=0.0014  Score=39.05  Aligned_cols=24  Identities=29%  Similarity=0.747  Sum_probs=22.0

Q ss_pred             CcccccCcCCccCChHHHHHHHhh
Q 015261           65 MTYSCGLCGKGYRSSKALAQHLNS   88 (410)
Q Consensus        65 ~~~~C~~C~K~f~s~~~l~~Hl~s   88 (410)
                      ++|.|.+|+|.|.....|..|++.
T Consensus         2 k~~~C~~C~k~f~~~~~l~~H~~~   25 (28)
T 2kvf_A            2 RPYSCSVCGKRFSLKHQMETHYRV   25 (28)
T ss_dssp             CSEECSSSCCEESCHHHHHHHHTT
T ss_pred             cCccCCCCCcccCCHHHHHHHHHh
Confidence            579999999999999999999874

>1vd4_A Transcription initiation factor IIE, alpha subunit; zinc finger; NMR {Homo sapiens} SCOP: g.41.3.1

Probab=96.45  E-value=0.00018  Score=52.81  Aligned_cols=42  Identities=17%  Similarity=0.463  Sum_probs=31.0

Q ss_pred             CCCcccccccccCChHHHhhhhhhccccchhhhhhcCCCCCCHHHHHHHHHHHHHhhhcCCCCCcccccCcCCccCChHH
Q 015261            2 PGLTCNSCNREFNDDAEQKLHYKSDWHRYNLKRKVAGVPGVTEALFLARQAALAQEKNKNATPMTYSCGLCGKGYRSSKA   81 (410)
Q Consensus         2 ~~ftC~~C~~~F~~~~~qr~H~ksdwHrYNlKRrva~Lppvs~~~F~~k~~~l~~~~~~~~~~~~~~C~~C~K~f~s~~~   81 (410)
                      .+|.|..|+..|.....|+   +.  |                                 .++.+|.|.+|+|.|.....
T Consensus        13 k~~~C~~C~k~F~~~~~l~---~~--H---------------------------------~~~k~~~C~~C~k~f~~~~~   54 (62)
T 1vd4_A           13 ASFKCPVCSSTFTDLEANQ---LF--D---------------------------------PMTGTFRCTFCHTEVEEDES   54 (62)
T ss_dssp             SEEECSSSCCEEEHHHHHH---HE--E---------------------------------TTTTEEBCSSSCCBCEECTT
T ss_pred             CCccCCCCCchhccHHHhH---hh--c---------------------------------CCCCCEECCCCCCccccCcc
Confidence            3689999999998765554   22  3                                 24578999999999987654

>1njq_A Superman protein; zinc-finger, peptide-zinc complex, beta-BETA-ALFA motif, metal binding protein; NMR {Synthetic} SCOP: g.37.1.3 PDB: 2l1o_A

Probab=96.45  E-value=0.0015  Score=42.53  Aligned_cols=27  Identities=37%  Similarity=0.882  Sum_probs=24.2

Q ss_pred             CCCCcccccCcCCccCChHHHHHHHhh
Q 015261           62 ATPMTYSCGLCGKGYRSSKALAQHLNS   88 (410)
Q Consensus        62 ~~~~~~~C~~C~K~f~s~~~l~~Hl~s   88 (410)
                      .++++|.|.+|+|.|.+...|..|++.
T Consensus         2 ~~~k~~~C~~C~k~f~~~~~L~~H~~~   28 (39)
T 1njq_A            2 WPPRSYTCSFCKREFRSAQALGGHMNV   28 (39)
T ss_dssp             CCSSSEECTTTCCEESSHHHHHHHHHT
T ss_pred             CCCCceECCCCCcccCCHHHHHHHHHH
Confidence            356789999999999999999999875

>2epu_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=96.45  E-value=0.00091  Score=45.06  Aligned_cols=27  Identities=26%  Similarity=0.399  Sum_probs=25.3

Q ss_pred             CCcccCCCCCCCCChhHHhhhhhhhhc
Q 015261          181 DPACCFMCDLPHDAIENCMVHMHKCHG  207 (410)
Q Consensus       181 ~p~~ClfC~~~f~~~~~~~~HM~~~Hg  207 (410)
                      .|+.|.+|++.|.....|..||.+|++
T Consensus        11 k~~~C~~C~k~F~~~~~L~~H~~~H~~   37 (45)
T 2epu_A           11 KPFECTHCGKSFRAKGNLVTHQRIHTG   37 (45)
T ss_dssp             CSEEETTTTEEESSHHHHHHHHTTTSS
T ss_pred             cCccCCCCCCccCChHHHHHHHHHhCC
Confidence            689999999999999999999999776

>2yte_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=96.44  E-value=0.0017  Score=42.69  Aligned_cols=25  Identities=16%  Similarity=0.523  Sum_probs=22.8

Q ss_pred             CCccccccCCCCcccCCHHHHHHHHHhc
Q 015261          232 RDFMCLYCNDRCHPFNSLEAVRKHMEAK  259 (410)
Q Consensus       232 ~~~~Cl~C~~~gk~F~s~~alr~HM~~k  259 (410)
                      .++.|..|+   +.|.+...|+.||+..
T Consensus         9 k~~~C~~C~---k~f~~~~~L~~H~~~H   33 (42)
T 2yte_A            9 KPYSCAECK---ETFSDNNRLVQHQKMH   33 (42)
T ss_dssp             CSCBCTTTC---CBCSSHHHHHHHHHHT
T ss_pred             CCeECCCCC---CccCCHHHHHHHHHHh
Confidence            479999999   9999999999999873

>2elt_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=96.44  E-value=0.00099  Score=42.26  Aligned_cols=27  Identities=30%  Similarity=0.492  Sum_probs=25.1

Q ss_pred             CCcccCCCCCCCCChhHHhhhhhhhhc
Q 015261          181 DPACCFMCDLPHDAIENCMVHMHKCHG  207 (410)
Q Consensus       181 ~p~~ClfC~~~f~~~~~~~~HM~~~Hg  207 (410)
                      .|+.|.+|++.|.....|..||++|+|
T Consensus         8 k~~~C~~C~k~f~~~~~l~~H~~~H~~   34 (36)
T 2elt_A            8 KPYKCPQCSYASAIKANLNVHLRKHTG   34 (36)
T ss_dssp             CSEECSSSSCEESSHHHHHHHHHHHTC
T ss_pred             CCCCCCCCCcccCCHHHHHHHHHHccC
Confidence            689999999999999999999998765

>1srk_A Zinc finger protein ZFPM1; classical zinc finger, transcription; NMR {Mus musculus} SCOP: g.37.1.1

Probab=96.43  E-value=0.0012  Score=41.71  Aligned_cols=27  Identities=22%  Similarity=0.479  Sum_probs=25.1

Q ss_pred             CCcccCCCCCCCCChhHHhhhhhhhhc
Q 015261          181 DPACCFMCDLPHDAIENCMVHMHKCHG  207 (410)
Q Consensus       181 ~p~~ClfC~~~f~~~~~~~~HM~~~Hg  207 (410)
                      .|+.|.+|++.|.....|..||.+|+|
T Consensus         6 k~~~C~~C~k~f~~~~~l~~H~~~H~~   32 (35)
T 1srk_A            6 RPFVCRICLSAFTTKANCARHLKVHTD   32 (35)
T ss_dssp             SCEECSSSCCEESSHHHHHHHHGGGTS
T ss_pred             cCeeCCCCCcccCCHHHHHHHHHHcCC
Confidence            579999999999999999999999776

>2eoz_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=96.41  E-value=0.001  Score=45.00  Aligned_cols=27  Identities=15%  Similarity=0.260  Sum_probs=25.3

Q ss_pred             CCcccCCCCCCCCChhHHhhhhhhhhc
Q 015261          181 DPACCFMCDLPHDAIENCMVHMHKCHG  207 (410)
Q Consensus       181 ~p~~ClfC~~~f~~~~~~~~HM~~~Hg  207 (410)
                      .|+.|.+|++.|.....|..||.+|+|
T Consensus        11 k~~~C~~C~k~f~~~~~L~~H~~~H~~   37 (46)
T 2eoz_A           11 KPYSCNVCGKAFVLSAHLNQHLRVHTQ   37 (46)
T ss_dssp             CSEEETTTTEEESSHHHHHHHHHHHSS
T ss_pred             CCeECcccChhhCCHHHHHHHHHHhCC
Confidence            689999999999999999999999876

>1znf_A 31ST zinc finger from XFIN; zinc finger DNA binding domain; NMR {Xenopus laevis} SCOP: g.37.1.1

Probab=96.40  E-value=0.0016  Score=38.31  Aligned_cols=23  Identities=22%  Similarity=0.548  Sum_probs=21.4

Q ss_pred             CCcccccccccCChHHHhhhhhh
Q 015261            3 GLTCNSCNREFNDDAEQKLHYKS   25 (410)
Q Consensus         3 ~ftC~~C~~~F~~~~~qr~H~ks   25 (410)
                      +|.|..|+..|.....|+.|+++
T Consensus         1 ~~~C~~C~k~f~~~~~l~~H~~~   23 (27)
T 1znf_A            1 XYKCGLCERSFVEKSALSRHQRV   23 (27)
T ss_dssp             -CBCSSSCCBCSSHHHHHHHGGG
T ss_pred             CccCCCCCCcCCCHHHHHHHHHH
Confidence            68999999999999999999998

>1sp2_A SP1F2; zinc finger, transcription activation; NMR {Homo sapiens} SCOP: g.37.1.1 PDB: 1va2_A

Probab=96.40  E-value=0.002  Score=39.47  Aligned_cols=26  Identities=19%  Similarity=0.373  Sum_probs=23.9

Q ss_pred             CcccC--CCCCCCCChhHHhhhhhhhhc
Q 015261          182 PACCF--MCDLPHDAIENCMVHMHKCHG  207 (410)
Q Consensus       182 p~~Cl--fC~~~f~~~~~~~~HM~~~Hg  207 (410)
                      |+.|.  .|++.|.....|..||.+|.|
T Consensus         2 p~~C~~~~C~k~f~~~~~L~~H~~~H~~   29 (31)
T 1sp2_A            2 PFMCTWSYCGKRFTRSDELQRHKRTHTG   29 (31)
T ss_dssp             CCBCCSTTCCCBCSSHHHHHHHHTTTSC
T ss_pred             CcCCcCCCCCcccCCHhHHHHHHHHhcC
Confidence            68898  999999999999999999766

>2eq3_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=96.39  E-value=0.0013  Score=44.37  Aligned_cols=27  Identities=19%  Similarity=0.301  Sum_probs=25.2

Q ss_pred             CCcccCCCCCCCCChhHHhhhhhhhhc
Q 015261          181 DPACCFMCDLPHDAIENCMVHMHKCHG  207 (410)
Q Consensus       181 ~p~~ClfC~~~f~~~~~~~~HM~~~Hg  207 (410)
                      .|+.|..|++.|.....|..||.+|+|
T Consensus        11 k~~~C~~C~k~f~~~~~L~~H~~~H~~   37 (46)
T 2eq3_A           11 KPYECNQCGKAFSVRSSLTTHQAIHTG   37 (46)
T ss_dssp             CSSEETTTTEECSSHHHHHHHHTTSCC
T ss_pred             CCeECCCCChhhCCHHHHHHHHHHhCC
Confidence            689999999999999999999999776

>2elm_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=96.38  E-value=0.0017  Score=41.94  Aligned_cols=27  Identities=19%  Similarity=0.453  Sum_probs=24.2

Q ss_pred             CCCCCcccccCcCCccCChHHHHHH-Hh
Q 015261           61 NATPMTYSCGLCGKGYRSSKALAQH-LN   87 (410)
Q Consensus        61 ~~~~~~~~C~~C~K~f~s~~~l~~H-l~   87 (410)
                      +.++++|.|..|+|.|.....|..| ++
T Consensus         4 H~~~k~~~C~~C~k~f~~~~~L~~H~~~   31 (37)
T 2elm_A            4 GSSGHLYYCSQCHYSSITKNCLKRHVIQ   31 (37)
T ss_dssp             SSSSCEEECSSSSCEEECHHHHHHHHHH
T ss_pred             cCCCcCeECCCCCcccCCHHHHHHHHHH
Confidence            4577899999999999999999999 54

>2yu5_A Zinc finger protein 473; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=96.38  E-value=0.0013  Score=43.98  Aligned_cols=27  Identities=19%  Similarity=0.263  Sum_probs=25.2

Q ss_pred             CCcccCCCCCCCCChhHHhhhhhhhhc
Q 015261          181 DPACCFMCDLPHDAIENCMVHMHKCHG  207 (410)
Q Consensus       181 ~p~~ClfC~~~f~~~~~~~~HM~~~Hg  207 (410)
                      .|+.|.+|++.|.....|..||.+|++
T Consensus        11 k~~~C~~C~k~f~~~~~L~~H~~~H~~   37 (44)
T 2yu5_A           11 NPFKCSKCDRVFTQRNYLVQHERTHAR   37 (44)
T ss_dssp             CSEECSSSSCEESSSHHHHHHHHHCCC
T ss_pred             CCeECCCCCchhCCHHHHHHHhHhcCC
Confidence            689999999999999999999999776

>2lvu_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, transcription; NMR {Homo sapiens}

Probab=95.38  E-value=0.00056  Score=40.30  Aligned_cols=24  Identities=17%  Similarity=0.277  Sum_probs=22.4

Q ss_pred             CcccCCCCCCCCChhHHhhhhhhh
Q 015261          182 PACCFMCDLPHDAIENCMVHMHKC  205 (410)
Q Consensus       182 p~~ClfC~~~f~~~~~~~~HM~~~  205 (410)
                      |+.|..|++.|.+...|..||++|
T Consensus         2 p~~C~~C~k~f~~~~~l~~H~~~H   25 (26)
T 2lvu_A            2 PYVCERCGKRFVQSSQLANHIRHH   25 (26)
Confidence            689999999999999999999975

>2emg_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=96.36  E-value=0.0018  Score=43.67  Aligned_cols=28  Identities=21%  Similarity=0.442  Sum_probs=25.2

Q ss_pred             CCCCCcccccCcCCccCChHHHHHHHhh
Q 015261           61 NATPMTYSCGLCGKGYRSSKALAQHLNS   88 (410)
Q Consensus        61 ~~~~~~~~C~~C~K~f~s~~~l~~Hl~s   88 (410)
                      +.++++|.|.+|+|.|.+...|..|++.
T Consensus         7 H~~~k~~~C~~C~k~f~~~~~L~~H~~~   34 (46)
T 2emg_A            7 GTGENPFICSECGKVFTHKTNLIIHQKI   34 (46)
T ss_dssp             CCSCCSCBCTTTCCBCSSHHHHHHHHTT
T ss_pred             CCCCCCEECCccCcccCCHHHHHHHHHH
Confidence            4567899999999999999999999875

>2epp_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=96.36  E-value=0.0023  Score=48.27  Aligned_cols=30  Identities=10%  Similarity=-0.034  Sum_probs=27.1

Q ss_pred             CCCcccCCCCCCCCChhHHhhhhhhhhcCC
Q 015261          180 FDPACCFMCDLPHDAIENCMVHMHKCHGFF  209 (410)
Q Consensus       180 i~p~~ClfC~~~f~~~~~~~~HM~~~Hgf~  209 (410)
                      ..|+.|..|++.|.....|..||++|++..
T Consensus        11 ekpy~C~~CgK~F~~~s~L~~H~r~Htg~~   40 (66)
T 2epp_A           11 AGILPCGLCGKVFTDANRLRQHEAQHGVTS   40 (66)
T ss_dssp             CCCCCCTTTCCCCSCHHHHHHHHHHHTTTS
T ss_pred             ccCcCCCCCCCccCCHHHHHhhhhhhCCCc
Confidence            378999999999999999999999988743

>2eon_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=96.36  E-value=0.0018  Score=43.88  Aligned_cols=28  Identities=36%  Similarity=0.729  Sum_probs=25.3

Q ss_pred             CCCCCcccccCcCCccCChHHHHHHHhh
Q 015261           61 NATPMTYSCGLCGKGYRSSKALAQHLNS   88 (410)
Q Consensus        61 ~~~~~~~~C~~C~K~f~s~~~l~~Hl~s   88 (410)
                      +.++++|.|.+|+|.|.....|..|++.
T Consensus         7 H~~~k~~~C~~C~k~f~~~~~L~~H~~~   34 (46)
T 2eon_A            7 GTGEKPYKCQVCGKAFRVSSHLVQHHSV   34 (46)
T ss_dssp             CSSCCSCBCSSSCCBCSSHHHHHHHTTT
T ss_pred             CCCCcccCCCCCCcccCcHHHHHHHHHh
Confidence            5677899999999999999999999875

>2epv_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=96.35  E-value=0.0017  Score=43.52  Aligned_cols=28  Identities=25%  Similarity=0.508  Sum_probs=25.3

Q ss_pred             CCCCCcccccCcCCccCChHHHHHHHhh
Q 015261           61 NATPMTYSCGLCGKGYRSSKALAQHLNS   88 (410)
Q Consensus        61 ~~~~~~~~C~~C~K~f~s~~~l~~Hl~s   88 (410)
                      +.++++|.|.+|+|.|.....|..|++.
T Consensus         7 H~~~k~~~C~~C~k~F~~~~~L~~H~~~   34 (44)
T 2epv_A            7 GSGEKPYECNECGKAFIWKSLLIVHERT   34 (44)
T ss_dssp             CCCCCSEECSSSCCEESSHHHHHHHHGG
T ss_pred             cCCCcCeECCCCCcccCchHHHHHHHhH
Confidence            4577899999999999999999999875

>2eq2_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=96.35  E-value=0.002  Score=43.41  Aligned_cols=28  Identities=29%  Similarity=0.641  Sum_probs=25.2

Q ss_pred             CCCCCcccccCcCCccCChHHHHHHHhh
Q 015261           61 NATPMTYSCGLCGKGYRSSKALAQHLNS   88 (410)
Q Consensus        61 ~~~~~~~~C~~C~K~f~s~~~l~~Hl~s   88 (410)
                      +.++++|.|.+|+|.|.....|..|++.
T Consensus         7 H~~~k~~~C~~C~k~f~~~~~L~~H~~~   34 (46)
T 2eq2_A            7 GTGGKPYQCNECGKAFSQTSKLARHQRV   34 (46)
T ss_dssp             SSSSCSSSCCSSCCCCSSHHHHHHHGGG
T ss_pred             cCCCCCeECCCCCcccCCHHHHHHHHHH
Confidence            5577899999999999999999999865

>2emi_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=96.35  E-value=0.0017  Score=43.76  Aligned_cols=28  Identities=25%  Similarity=0.560  Sum_probs=25.3

Q ss_pred             CCCCCcccccCcCCccCChHHHHHHHhh
Q 015261           61 NATPMTYSCGLCGKGYRSSKALAQHLNS   88 (410)
Q Consensus        61 ~~~~~~~~C~~C~K~f~s~~~l~~Hl~s   88 (410)
                      +.++++|.|.+|+|.|.....|..|++.
T Consensus         7 H~~~~~~~C~~C~k~F~~~~~L~~H~~~   34 (46)
T 2emi_A            7 GTGERHYECSECGKAFIQKSTLSMHQRI   34 (46)
T ss_dssp             CSSCCCEECSSSCCEESSHHHHHHHHGG
T ss_pred             cCCCCCCCCCCCCcccCCHHHHHHHHhH
Confidence            5577899999999999999999999875

>2en9_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=96.34  E-value=0.002  Score=43.50  Aligned_cols=28  Identities=25%  Similarity=0.474  Sum_probs=25.4

Q ss_pred             CCCCCcccccCcCCccCChHHHHHHHhh
Q 015261           61 NATPMTYSCGLCGKGYRSSKALAQHLNS   88 (410)
Q Consensus        61 ~~~~~~~~C~~C~K~f~s~~~l~~Hl~s   88 (410)
                      +.++++|.|.+|+|.|.+...|..|++.
T Consensus         7 H~~~k~~~C~~C~k~F~~~~~L~~H~~~   34 (46)
T 2en9_A            7 GAGKKLFKCNECKKTFTQSSSLTVHQRI   34 (46)
T ss_dssp             CCSSCCCBCTTTCCBCSSHHHHHHHHHH
T ss_pred             CCCCCCEECCccCcccCCHHHHHHHHHH
Confidence            5677899999999999999999999875

>2en3_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=96.34  E-value=0.0013  Score=44.49  Aligned_cols=27  Identities=15%  Similarity=0.273  Sum_probs=25.2

Q ss_pred             CCcccCCCCCCCCChhHHhhhhhhhhc
Q 015261          181 DPACCFMCDLPHDAIENCMVHMHKCHG  207 (410)
Q Consensus       181 ~p~~ClfC~~~f~~~~~~~~HM~~~Hg  207 (410)
                      .|+.|.+|++.|.....|..||.+|++
T Consensus        11 k~~~C~~C~k~F~~~~~L~~H~~~H~~   37 (46)
T 2en3_A           11 KPFQCKECGMNFSWSCSLFKHLRSHER   37 (46)
T ss_dssp             CSEECSSSCCEESSSHHHHHHHHHHHH
T ss_pred             CCeeCcccChhhCCHHHHHHHHHHhCC
Confidence            689999999999999999999999776

>2els_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=96.34  E-value=0.0013  Score=41.93  Aligned_cols=27  Identities=11%  Similarity=0.166  Sum_probs=25.1

Q ss_pred             CCcccCCCCCCCCChhHHhhhhhhhhc
Q 015261          181 DPACCFMCDLPHDAIENCMVHMHKCHG  207 (410)
Q Consensus       181 ~p~~ClfC~~~f~~~~~~~~HM~~~Hg  207 (410)
                      .|+.|..|++.|.....|..||++|++
T Consensus         8 k~~~C~~C~k~f~~~~~l~~H~~~H~~   34 (36)
T 2els_A            8 KIFTCEYCNKVFKFKHSLQAHLRIHTN   34 (36)
T ss_dssp             CCEECTTTCCEESSHHHHHHHHHHHCC
T ss_pred             CCEECCCCCceeCCHHHHHHHHHHhCC
Confidence            689999999999999999999999765

>2eln_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=96.33  E-value=0.0013  Score=44.03  Aligned_cols=27  Identities=15%  Similarity=0.156  Sum_probs=25.0

Q ss_pred             CCcccCC--CCCCCCChhHHhhhhhhhhc
Q 015261          181 DPACCFM--CDLPHDAIENCMVHMHKCHG  207 (410)
Q Consensus       181 ~p~~Clf--C~~~f~~~~~~~~HM~~~Hg  207 (410)
                      .|+.|.+  |++.|.+...|..||++|.|
T Consensus         8 kp~~C~~~~C~k~F~~~~~L~~H~r~Htg   36 (38)
T 2eln_A            8 ILLKCPTDGCDYSTPDKYKLQAHLKVHTA   36 (38)
T ss_dssp             CCEECSSSSCCCEESCHHHHHHHHHHHSC
T ss_pred             CCCCCCCCCCCCccCCHHHHHHHHHhcCC
Confidence            6899987  99999999999999999876

>3iuf_A Zinc finger protein UBI-D4; structural genomics consortium (SGC), C2H2, APO metal-binding, nucleus, phosphoprotein, transcription, TRAN regulation; 1.80A {Homo sapiens}

Probab=96.33  E-value=0.0019  Score=44.62  Aligned_cols=27  Identities=30%  Similarity=0.768  Sum_probs=24.7

Q ss_pred             CCCCCcccccCcCCccCChHHHHHHHh
Q 015261           61 NATPMTYSCGLCGKGYRSSKALAQHLN   87 (410)
Q Consensus        61 ~~~~~~~~C~~C~K~f~s~~~l~~Hl~   87 (410)
                      ++++++|.|.+|+|.|.....|..|++
T Consensus         2 Ht~~kp~~C~~C~k~F~~~~~L~~H~~   28 (48)
T 3iuf_A            2 EDRDKPYACDICGKRYKNRPGLSYHYA   28 (48)
T ss_dssp             CTTTSCEECTTTCCEESSHHHHHHHHH
T ss_pred             CCCCcCEECCCcCcccCCHHHHHHHhh
Confidence            456789999999999999999999997

>2en7_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=96.33  E-value=0.0016  Score=43.29  Aligned_cols=24  Identities=21%  Similarity=0.506  Sum_probs=22.2

Q ss_pred             CCccccccCCCCcccCCHHHHHHHHHh
Q 015261          232 RDFMCLYCNDRCHPFNSLEAVRKHMEA  258 (410)
Q Consensus       232 ~~~~Cl~C~~~gk~F~s~~alr~HM~~  258 (410)
                      .++.|..|+   +.|.+...|+.||+.
T Consensus        11 k~~~C~~C~---k~f~~~~~L~~H~~~   34 (44)
T 2en7_A           11 KPYVCNECG---KAFRSKSYLIIHTRT   34 (44)
T ss_dssp             SSSCCTTTC---CCCSSHHHHHHHHTT
T ss_pred             cCeECCCCC---CccCCHHHHHHHhhh
Confidence            479999999   999999999999975

>2els_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=96.32  E-value=0.0021  Score=40.83  Aligned_cols=28  Identities=21%  Similarity=0.565  Sum_probs=24.8

Q ss_pred             CCCCCcccccCcCCccCChHHHHHHHhh
Q 015261           61 NATPMTYSCGLCGKGYRSSKALAQHLNS   88 (410)
Q Consensus        61 ~~~~~~~~C~~C~K~f~s~~~l~~Hl~s   88 (410)
                      +.++++|.|.+|+|.|.....|..|++.
T Consensus         4 ~~~~k~~~C~~C~k~f~~~~~l~~H~~~   31 (36)
T 2els_A            4 GSSGKIFTCEYCNKVFKFKHSLQAHLRI   31 (36)
T ss_dssp             TSCCCCEECTTTCCEESSHHHHHHHHHH
T ss_pred             CCCCCCEECCCCCceeCCHHHHHHHHHH
Confidence            3466889999999999999999999975

>2emj_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eoi_A

Probab=96.31  E-value=0.0017  Score=43.84  Aligned_cols=28  Identities=29%  Similarity=0.582  Sum_probs=25.3

Q ss_pred             CCCCCcccccCcCCccCChHHHHHHHhh
Q 015261           61 NATPMTYSCGLCGKGYRSSKALAQHLNS   88 (410)
Q Consensus        61 ~~~~~~~~C~~C~K~f~s~~~l~~Hl~s   88 (410)
                      +.++++|.|.+|+|.|.....|..|++.
T Consensus         7 H~~~k~~~C~~C~k~F~~~~~L~~H~~~   34 (46)
T 2emj_A            7 GTGEKPFECAECGKSFSISSQLATHQRI   34 (46)
T ss_dssp             CCCCCSEECSSSSCEESSHHHHHHHHHH
T ss_pred             CCCCCCEECCCCCcccCCHHHHHHHHHH
Confidence            4567899999999999999999999975

>2elv_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=96.31  E-value=0.0013  Score=41.92  Aligned_cols=27  Identities=15%  Similarity=0.092  Sum_probs=24.9

Q ss_pred             CCcccCCCCCCCCChhHHhhhhhhhhc
Q 015261          181 DPACCFMCDLPHDAIENCMVHMHKCHG  207 (410)
Q Consensus       181 ~p~~ClfC~~~f~~~~~~~~HM~~~Hg  207 (410)
                      .|+.|..|++.|.....|..||.+|.+
T Consensus         8 k~~~C~~C~k~f~~~~~l~~H~~~H~~   34 (36)
T 2elv_A            8 LLYDCHICERKFKNELDRDRHMLVHGD   34 (36)
T ss_dssp             CCEECSSSCCEESSHHHHHHHHTTTST
T ss_pred             CCeECCCCCCccCCHHHHHHHHHHhcC
Confidence            689999999999999999999998765

>2elp_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=96.31  E-value=0.0021  Score=41.07  Aligned_cols=28  Identities=14%  Similarity=0.361  Sum_probs=24.9

Q ss_pred             CCCCCcccccCcCCccCCh-HHHHHHHhh
Q 015261           61 NATPMTYSCGLCGKGYRSS-KALAQHLNS   88 (410)
Q Consensus        61 ~~~~~~~~C~~C~K~f~s~-~~l~~Hl~s   88 (410)
                      +.++++|.|.+|+|.|... ..|..|++.
T Consensus         4 h~~~k~~~C~~C~k~f~~~~~~L~~H~~~   32 (37)
T 2elp_A            4 GSSGRAMKCPYCDFYFMKNGSDLQRHIWA   32 (37)
T ss_dssp             CCCCCCEECSSSSCEECSSCHHHHHHHHH
T ss_pred             CCCCCCeECCCCChhhccCHHHHHHHHHh
Confidence            4567899999999999999 999999975

>2ent_A Krueppel-like factor 15; zinc binding, transcription factor, adipogenesis, CLCNKA, chloride channel Ka, rhodopsin, IRBP; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=96.31  E-value=0.0019  Score=43.82  Aligned_cols=24  Identities=25%  Similarity=0.560  Sum_probs=22.3

Q ss_pred             CCCccc--ccccccCChHHHhhhhhh
Q 015261            2 PGLTCN--SCNREFNDDAEQKLHYKS   25 (410)
Q Consensus         2 ~~ftC~--~C~~~F~~~~~qr~H~ks   25 (410)
                      .+|.|.  .|+..|.....|+.|+++
T Consensus        11 k~~~C~~~~C~k~f~~~~~L~~H~~~   36 (48)
T 2ent_A           11 KPFACTWPGCGWRFSRSDELSRHRRS   36 (48)
T ss_dssp             CCEECCSSSCCCEESSHHHHHHHHTT
T ss_pred             CCeECCCCCCCCccCCHHHHHHHHHH
Confidence            479998  899999999999999998

>2epc_A Zinc finger protein 32; zinc finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2yta_A

Probab=96.30  E-value=0.0019  Score=42.54  Aligned_cols=28  Identities=36%  Similarity=0.713  Sum_probs=25.2

Q ss_pred             CCCCCcccccCcCCccCChHHHHHHHhh
Q 015261           61 NATPMTYSCGLCGKGYRSSKALAQHLNS   88 (410)
Q Consensus        61 ~~~~~~~~C~~C~K~f~s~~~l~~Hl~s   88 (410)
                      +.++++|.|.+|+|.|.....|..|++.
T Consensus         6 H~~~~~~~C~~C~k~f~~~~~l~~H~~~   33 (42)
T 2epc_A            6 SGGETPYLCGQCGKSFTQRGSLAVHQRS   33 (42)
T ss_dssp             CCSSCCEECSSSCCEESSHHHHHHHHHH
T ss_pred             CCCCCCeECCCCCcccCCHHHHHHHhhh
Confidence            4567899999999999999999999875

>2eoh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=96.30  E-value=0.0022  Score=43.31  Aligned_cols=25  Identities=16%  Similarity=0.523  Sum_probs=22.9

Q ss_pred             CCccccccCCCCcccCCHHHHHHHHHhc
Q 015261          232 RDFMCLYCNDRCHPFNSLEAVRKHMEAK  259 (410)
Q Consensus       232 ~~~~Cl~C~~~gk~F~s~~alr~HM~~k  259 (410)
                      .+|.|..|+   +.|.+...|+.||+..
T Consensus        11 k~~~C~~C~---k~f~~~~~L~~H~~~H   35 (46)
T 2eoh_A           11 KPYECKECR---KTFIQIGHLNQHKRVH   35 (46)
T ss_dssp             CSCCCSSSC---CCCSSHHHHHHHHHHC
T ss_pred             CCcCCCCcC---chhCCHHHHHHHHHHh
Confidence            479999999   9999999999999874

>2en2_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=96.30  E-value=0.0016  Score=42.91  Aligned_cols=28  Identities=21%  Similarity=0.475  Sum_probs=25.3

Q ss_pred             CCCCCcccccCcCCccCChHHHHHHHhh
Q 015261           61 NATPMTYSCGLCGKGYRSSKALAQHLNS   88 (410)
Q Consensus        61 ~~~~~~~~C~~C~K~f~s~~~l~~Hl~s   88 (410)
                      +.++++|.|.+|+|.|.....|..|++.
T Consensus         6 H~~~k~~~C~~C~k~f~~~~~L~~H~~~   33 (42)
T 2en2_A            6 SGGEKPYKCETCGARFVQVAHLRAHVLI   33 (42)
T ss_dssp             CCSSCSEECTTTCCEESSHHHHHHHTHH
T ss_pred             cCCCCCEeCCCcChhhCCHHHHHHHHHH
Confidence            5577899999999999999999999874

>2el5_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eol_A 2emv_A 2eqw_A 2en0_A 2epy_A

Probab=96.29  E-value=0.0016  Score=42.93  Aligned_cols=25  Identities=20%  Similarity=0.525  Sum_probs=22.7

Q ss_pred             CCccccccCCCCcccCCHHHHHHHHHhc
Q 015261          232 RDFMCLYCNDRCHPFNSLEAVRKHMEAK  259 (410)
Q Consensus       232 ~~~~Cl~C~~~gk~F~s~~alr~HM~~k  259 (410)
                      .++.|..|+   +.|.+...|+.||+..
T Consensus         9 k~~~C~~C~---k~f~~~~~L~~H~~~H   33 (42)
T 2el5_A            9 NPYECSECG---KAFNRKDQLISHQRTH   33 (42)
T ss_dssp             CSEECSSSC---CEESSHHHHHHHHGGG
T ss_pred             CCccCCCcC---hhhCCHHHHHHHHHhc
Confidence            479999999   9999999999999863

>2ytp_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=96.29  E-value=0.0018  Score=43.81  Aligned_cols=28  Identities=25%  Similarity=0.554  Sum_probs=25.3

Q ss_pred             CCCCCcccccCcCCccCChHHHHHHHhh
Q 015261           61 NATPMTYSCGLCGKGYRSSKALAQHLNS   88 (410)
Q Consensus        61 ~~~~~~~~C~~C~K~f~s~~~l~~Hl~s   88 (410)
                      +.++++|.|.+|+|.|.....|..|++.
T Consensus         7 H~~~k~~~C~~C~k~F~~~~~L~~H~~~   34 (46)
T 2ytp_A            7 GTGERHYECSECGKAFARKSTLIMHQRI   34 (46)
T ss_dssp             SCCCCCEECSSSCCEESSHHHHHHHHTT
T ss_pred             cCCCCCeECCcCCcccCCHHHHHHHHHH
Confidence            5577899999999999999999999875

>2ept_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=96.28  E-value=0.0023  Score=41.98  Aligned_cols=28  Identities=29%  Similarity=0.610  Sum_probs=25.2

Q ss_pred             CCCCCcccccCcCCccCChHHHHHHHhh
Q 015261           61 NATPMTYSCGLCGKGYRSSKALAQHLNS   88 (410)
Q Consensus        61 ~~~~~~~~C~~C~K~f~s~~~l~~Hl~s   88 (410)
                      +.++++|.|.+|+|.|.....|..|++.
T Consensus         5 h~~~k~~~C~~C~k~f~~~~~L~~H~~~   32 (41)
T 2ept_A            5 SSGQRVYECQECGKSFRQKGSLTLHERI   32 (41)
T ss_dssp             CCCCCCEECSSSCCEESSHHHHHHHGGG
T ss_pred             cCCCCCeECCCCCCCcCCHHHHHHHHHH
Confidence            5577899999999999999999999865

>2enh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=96.28  E-value=0.0022  Score=43.26  Aligned_cols=28  Identities=25%  Similarity=0.595  Sum_probs=25.3

Q ss_pred             CCCCCcccccCcCCccCChHHHHHHHhh
Q 015261           61 NATPMTYSCGLCGKGYRSSKALAQHLNS   88 (410)
Q Consensus        61 ~~~~~~~~C~~C~K~f~s~~~l~~Hl~s   88 (410)
                      +.++++|.|.+|+|.|.....|..|++.
T Consensus         7 h~~~k~~~C~~C~k~F~~~~~L~~H~~~   34 (46)
T 2enh_A            7 GTGEKPYECDVCRKAFSHHASLTQHQRV   34 (46)
T ss_dssp             CCCSSSCBCTTTCCBCSSSHHHHHHGGG
T ss_pred             cCCCCCcCCCCcCchhCCHHHHHHHHHH
Confidence            5577899999999999999999999875

>2ep1_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=96.28  E-value=0.002  Score=43.32  Aligned_cols=25  Identities=16%  Similarity=0.437  Sum_probs=22.8

Q ss_pred             CCccccccCCCCcccCCHHHHHHHHHhc
Q 015261          232 RDFMCLYCNDRCHPFNSLEAVRKHMEAK  259 (410)
Q Consensus       232 ~~~~Cl~C~~~gk~F~s~~alr~HM~~k  259 (410)
                      .++.|..|+   +.|.+...|+.||+..
T Consensus        11 k~~~C~~C~---k~f~~~~~L~~H~~~H   35 (46)
T 2ep1_A           11 KPYECSDCG---KSFIKKSQLHVHQRIH   35 (46)
T ss_dssp             CSSCCSSSC---CCCSSHHHHHHHHGGG
T ss_pred             CCcCCCCCC---chhCCHHHHHHHHHHh
Confidence            479999999   9999999999999863

>2yti_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=96.28  E-value=0.0017  Score=43.79  Aligned_cols=24  Identities=17%  Similarity=0.458  Sum_probs=22.2

Q ss_pred             CCccccccCCCCcccCCHHHHHHHHHh
Q 015261          232 RDFMCLYCNDRCHPFNSLEAVRKHMEA  258 (410)
Q Consensus       232 ~~~~Cl~C~~~gk~F~s~~alr~HM~~  258 (410)
                      .+|.|..|+   +.|.+...|+.||+.
T Consensus        11 k~~~C~~C~---k~F~~~~~L~~H~~~   34 (46)
T 2yti_A           11 KPYKCNECG---KVFTQNSHLARHRGI   34 (46)
T ss_dssp             CTTCCSSSC---CCCSSHHHHHHHHTT
T ss_pred             cCeECCCCC---cccCChhHHHHHhHh
Confidence            479999999   999999999999975

>2ytb_A Zinc finger protein 32; zinc-finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=96.27  E-value=0.0016  Score=42.82  Aligned_cols=28  Identities=25%  Similarity=0.630  Sum_probs=25.1

Q ss_pred             CCCCCcccccCcCCccCChHHHHHHHhh
Q 015261           61 NATPMTYSCGLCGKGYRSSKALAQHLNS   88 (410)
Q Consensus        61 ~~~~~~~~C~~C~K~f~s~~~l~~Hl~s   88 (410)
                      +.++++|.|.+|+|.|.....|..|++.
T Consensus         6 H~~~k~~~C~~C~k~f~~~~~L~~H~~~   33 (42)
T 2ytb_A            6 SGGEKPYRCDQCGKAFSQKGSLIVHIRV   33 (42)
T ss_dssp             CCSCCSBCCTTTTCCBSSHHHHHTTGGG
T ss_pred             cCCCCCeeCCCccchhCCHHHHHHHHHH
Confidence            4577899999999999999999999864

>2enf_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=96.27  E-value=0.0018  Score=43.70  Aligned_cols=24  Identities=17%  Similarity=0.438  Sum_probs=22.2

Q ss_pred             CCccccccCCCCcccCCHHHHHHHHHh
Q 015261          232 RDFMCLYCNDRCHPFNSLEAVRKHMEA  258 (410)
Q Consensus       232 ~~~~Cl~C~~~gk~F~s~~alr~HM~~  258 (410)
                      .+|.|..|+   +.|.+...|+.||+.
T Consensus        11 k~~~C~~C~---k~F~~~~~L~~H~~~   34 (46)
T 2enf_A           11 KPYKCNECG---KVFTQNSHLVRHRGI   34 (46)
T ss_dssp             CSCBCSSSC---CBCSSHHHHHHHHTT
T ss_pred             cCeECCCCC---cccCCHHHHHHHHHh
Confidence            479999999   999999999999975

>2eq1_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=96.27  E-value=0.0017  Score=43.83  Aligned_cols=24  Identities=17%  Similarity=0.483  Sum_probs=22.2

Q ss_pred             CCccccccCCCCcccCCHHHHHHHHHh
Q 015261          232 RDFMCLYCNDRCHPFNSLEAVRKHMEA  258 (410)
Q Consensus       232 ~~~~Cl~C~~~gk~F~s~~alr~HM~~  258 (410)
                      .+|.|..|+   +.|.+...|+.||+.
T Consensus        11 k~~~C~~C~---k~f~~~~~L~~H~~~   34 (46)
T 2eq1_A           11 KPYKCNECG---KAFRAHSNLTTHQVI   34 (46)
T ss_dssp             CCCCCTTTT---CCCSSHHHHHHHHTT
T ss_pred             CCeECCcCC---hhhCCHHHHHHHHHH
Confidence            479999999   999999999999985

>2em3_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=96.26  E-value=0.002  Score=43.49  Aligned_cols=28  Identities=29%  Similarity=0.640  Sum_probs=25.3

Q ss_pred             CCCCCcccccCcCCccCChHHHHHHHhh
Q 015261           61 NATPMTYSCGLCGKGYRSSKALAQHLNS   88 (410)
Q Consensus        61 ~~~~~~~~C~~C~K~f~s~~~l~~Hl~s   88 (410)
                      +.++.+|.|.+|+|.|.+...|..|++.
T Consensus         7 H~~~~~~~C~~C~k~F~~~~~L~~H~~~   34 (46)
T 2em3_A            7 GTGEKPYECKVCSKAFTQKAHLAQHQKT   34 (46)
T ss_dssp             CSSCCSEECSSSCCEESSHHHHHHHHHH
T ss_pred             CCCCcCeECCCCCcccCCHHHHHHHHHH
Confidence            4567899999999999999999999975

>2eox_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=96.26  E-value=0.0011  Score=44.31  Aligned_cols=27  Identities=15%  Similarity=0.132  Sum_probs=25.3

Q ss_pred             CCcccCCCCCCCCChhHHhhhhhhhhc
Q 015261          181 DPACCFMCDLPHDAIENCMVHMHKCHG  207 (410)
Q Consensus       181 ~p~~ClfC~~~f~~~~~~~~HM~~~Hg  207 (410)
                      .|+.|..|++.|.+...|..||.+|+|
T Consensus        11 ~~~~C~~C~k~F~~~~~L~~H~~~H~~   37 (44)
T 2eox_A           11 KSYNCNECGKAFTRIFHLTRHQKIHTR   37 (44)
T ss_dssp             CCEEETTTTEEESSSHHHHTTHHHHCC
T ss_pred             CCeECcccCcccCCHHHHHHHHHHhCC
Confidence            689999999999999999999999776

>2eof_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=96.25  E-value=0.0017  Score=43.19  Aligned_cols=25  Identities=20%  Similarity=0.522  Sum_probs=22.8

Q ss_pred             CCccccccCCCCcccCCHHHHHHHHHhc
Q 015261          232 RDFMCLYCNDRCHPFNSLEAVRKHMEAK  259 (410)
Q Consensus       232 ~~~~Cl~C~~~gk~F~s~~alr~HM~~k  259 (410)
                      .++.|..|+   +.|.+...|+.||+..
T Consensus        11 k~~~C~~C~---k~f~~~~~L~~H~~~H   35 (44)
T 2eof_A           11 KPYECNECQ---KAFNTKSNLMVHQRTH   35 (44)
T ss_dssp             CSEECTTTC---CEESCHHHHHHHHHHT
T ss_pred             CCeECCCCC---cccCCHhHHHHHHHHh
Confidence            479999999   9999999999999873

>2em4_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=96.25  E-value=0.002  Score=43.49  Aligned_cols=28  Identities=29%  Similarity=0.593  Sum_probs=25.3

Q ss_pred             CCCCCcccccCcCCccCChHHHHHHHhh
Q 015261           61 NATPMTYSCGLCGKGYRSSKALAQHLNS   88 (410)
Q Consensus        61 ~~~~~~~~C~~C~K~f~s~~~l~~Hl~s   88 (410)
                      +.++++|.|.+|+|.|.....|..|++.
T Consensus         7 H~~~k~~~C~~C~k~f~~~~~L~~H~~~   34 (46)
T 2em4_A            7 GTGQRPYECIECGKAFKTKSSLICHRRS   34 (46)
T ss_dssp             CCCSSSEECSSSCCEESSHHHHHHHHHH
T ss_pred             cCCCcCcCCCCCCCccCCHHHHHHHHHh
Confidence            5577899999999999999999999875

>2elq_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=96.24  E-value=0.0014  Score=41.68  Aligned_cols=27  Identities=22%  Similarity=0.497  Sum_probs=25.1

Q ss_pred             CCcccCCCCCCCCChhHHhhhhhhhhc
Q 015261          181 DPACCFMCDLPHDAIENCMVHMHKCHG  207 (410)
Q Consensus       181 ~p~~ClfC~~~f~~~~~~~~HM~~~Hg  207 (410)
                      .|+.|..|++.|.....|..||.+|++
T Consensus         8 k~~~C~~C~k~f~~~~~l~~H~~~H~~   34 (36)
T 2elq_A            8 KPFKCSLCEYATRSKSNLKAHMNRHST   34 (36)
T ss_dssp             CSEECSSSSCEESCHHHHHHHHHHSST
T ss_pred             CCccCCCCCchhCCHHHHHHHHHHhcc
Confidence            689999999999999999999998765

>2kfq_A FP1; protein, de novo protein; NMR {Synthetic}

Probab=96.23  E-value=0.00052  Score=42.98  Aligned_cols=26  Identities=12%  Similarity=0.139  Sum_probs=24.0

Q ss_pred             CcccCCCCCCCCChhHHhhhhhhhhc
Q 015261          182 PACCFMCDLPHDAIENCMVHMHKCHG  207 (410)
Q Consensus       182 p~~ClfC~~~f~~~~~~~~HM~~~Hg  207 (410)
                      |+.|..|++.|.....|..||.+|.|
T Consensus         2 p~~C~~C~k~f~~~~~L~~H~~~H~~   27 (32)
T 2kfq_A            2 AFACPACPKRFMRSDALSKHIKTAFI   27 (32)
T ss_dssp             CSSSSSSCTTHHHHHTTSSSTTSSSS
T ss_pred             CCCCCCCCcccCCHHHHHHHHHHHcc
Confidence            68999999999999999999998765

>2eor_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=96.23  E-value=0.0021  Score=43.27  Aligned_cols=28  Identities=25%  Similarity=0.570  Sum_probs=25.3

Q ss_pred             CCCCCcccccCcCCccCChHHHHHHHhh
Q 015261           61 NATPMTYSCGLCGKGYRSSKALAQHLNS   88 (410)
Q Consensus        61 ~~~~~~~~C~~C~K~f~s~~~l~~Hl~s   88 (410)
                      +.++++|.|.+|+|.|.....|..|++.
T Consensus         7 H~~~~~~~C~~C~k~f~~~~~L~~H~~~   34 (46)
T 2eor_A            7 GTGEKPYNCEECGKAFIHDSQLQEHQRI   34 (46)
T ss_dssp             SSCCCSEECTTTCCEESSHHHHHHHHHH
T ss_pred             cCCCcCccCCCCCCCcCCHHHHHHHHHh
Confidence            4567899999999999999999999875

>2yu5_A Zinc finger protein 473; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=96.23  E-value=0.0021  Score=42.92  Aligned_cols=28  Identities=21%  Similarity=0.482  Sum_probs=25.3

Q ss_pred             CCCCCcccccCcCCccCChHHHHHHHhh
Q 015261           61 NATPMTYSCGLCGKGYRSSKALAQHLNS   88 (410)
Q Consensus        61 ~~~~~~~~C~~C~K~f~s~~~l~~Hl~s   88 (410)
                      +.++++|.|.+|+|.|.....|..|++.
T Consensus         7 H~~~k~~~C~~C~k~f~~~~~L~~H~~~   34 (44)
T 2yu5_A            7 GAGENPFKCSKCDRVFTQRNYLVQHERT   34 (44)
T ss_dssp             CSCCCSEECSSSSCEESSSHHHHHHHHH
T ss_pred             cCCCCCeECCCCCchhCCHHHHHHHhHh
Confidence            4577899999999999999999999875

>2yts_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=96.22  E-value=0.0022  Score=43.15  Aligned_cols=28  Identities=25%  Similarity=0.533  Sum_probs=25.1

Q ss_pred             CCCCCcccccCcCCccCChHHHHHHHhh
Q 015261           61 NATPMTYSCGLCGKGYRSSKALAQHLNS   88 (410)
Q Consensus        61 ~~~~~~~~C~~C~K~f~s~~~l~~Hl~s   88 (410)
                      +.++++|.|.+|+|.|.....|..|++.
T Consensus         7 H~~~k~~~C~~C~k~f~~~~~L~~H~~~   34 (46)
T 2yts_A            7 GTGEKPYICNECGKSFIQKSHLNRHRRI   34 (46)
T ss_dssp             CCSCCSEECSSSCCEESSHHHHHHHGGG
T ss_pred             CCCCcCEECCCCChhhCChHHHHHHHHh
Confidence            4567899999999999999999999864

>2yth_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=96.21  E-value=0.0019  Score=43.63  Aligned_cols=25  Identities=20%  Similarity=0.511  Sum_probs=22.7

Q ss_pred             CCccccccCCCCcccCCHHHHHHHHHhc
Q 015261          232 RDFMCLYCNDRCHPFNSLEAVRKHMEAK  259 (410)
Q Consensus       232 ~~~~Cl~C~~~gk~F~s~~alr~HM~~k  259 (410)
                      .+|.|..|+   +.|.+...|+.||+..
T Consensus        11 k~~~C~~C~---k~f~~~~~L~~H~~~H   35 (46)
T 2yth_A           11 KPFQCEECG---KRFTQNSHLHSHQRVH   35 (46)
T ss_dssp             SSBCCSSSC---CCBSSHHHHHHHGGGG
T ss_pred             cCCCCCCCC---cccCCHHHHHHHHHhc
Confidence            479999999   9999999999999864

>2kvg_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=96.21  E-value=0.0016  Score=38.87  Aligned_cols=24  Identities=17%  Similarity=0.321  Sum_probs=22.7

Q ss_pred             CCCcccccccccCChHHHhhhhhh
Q 015261            2 PGLTCNSCNREFNDDAEQKLHYKS   25 (410)
Q Consensus         2 ~~ftC~~C~~~F~~~~~qr~H~ks   25 (410)
                      .+|.|..|+..|.....|+.|+++
T Consensus         2 k~~~C~~C~k~f~~~~~l~~H~~~   25 (27)
T 2kvg_A            2 APYRCPLCRAGCPSLASMQAHMRG   25 (27)
T ss_dssp             CTEEETTTTEEESCHHHHHHHHTT
T ss_pred             cCcCCCCCCcccCCHHHHHHHHHh
Confidence            479999999999999999999987

>2eoy_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=96.20  E-value=0.002  Score=43.51  Aligned_cols=28  Identities=29%  Similarity=0.511  Sum_probs=25.1

Q ss_pred             CCCCCcccccCcCCccCChHHHHHHHhh
Q 015261           61 NATPMTYSCGLCGKGYRSSKALAQHLNS   88 (410)
Q Consensus        61 ~~~~~~~~C~~C~K~f~s~~~l~~Hl~s   88 (410)
                      +.++++|.|.+|+|.|.....|..|++.
T Consensus         7 H~~~k~~~C~~C~k~f~~~~~L~~H~~~   34 (46)
T 2eoy_A            7 GQKEKCFKCNKCEKTFSCSKYLTQHERI   34 (46)
T ss_dssp             CCCSCCEECSSSCCEESSSHHHHHHHTT
T ss_pred             cCCCCCEECcCCCCcCCCHHHHHHHHHH
Confidence            4567899999999999999999999865

>2eoz_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=96.18  E-value=0.0019  Score=43.68  Aligned_cols=28  Identities=39%  Similarity=0.730  Sum_probs=25.3

Q ss_pred             CCCCCcccccCcCCccCChHHHHHHHhh
Q 015261           61 NATPMTYSCGLCGKGYRSSKALAQHLNS   88 (410)
Q Consensus        61 ~~~~~~~~C~~C~K~f~s~~~l~~Hl~s   88 (410)
                      +.++++|.|.+|+|.|.....|..|++.
T Consensus         7 H~~~k~~~C~~C~k~f~~~~~L~~H~~~   34 (46)
T 2eoz_A            7 GTGEKPYSCNVCGKAFVLSAHLNQHLRV   34 (46)
T ss_dssp             CSSCCSEEETTTTEEESSHHHHHHHHHH
T ss_pred             CCCCCCeECcccChhhCCHHHHHHHHHH
Confidence            4567899999999999999999999875

>2emz_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=96.18  E-value=0.0024  Score=43.12  Aligned_cols=25  Identities=24%  Similarity=0.526  Sum_probs=22.8

Q ss_pred             CCccccccCCCCcccCCHHHHHHHHHhc
Q 015261          232 RDFMCLYCNDRCHPFNSLEAVRKHMEAK  259 (410)
Q Consensus       232 ~~~~Cl~C~~~gk~F~s~~alr~HM~~k  259 (410)
                      .+|.|..|+   +.|.+...|+.||+..
T Consensus        11 k~~~C~~C~---k~f~~~~~L~~H~~~H   35 (46)
T 2emz_A           11 RPFKCNECG---KGFGRRSHLAGHLRLH   35 (46)
T ss_dssp             CSCCCSSSC---CCCSSHHHHHHHHHHH
T ss_pred             CCeECCCCC---cccCCHHHHHHHHHHh
Confidence            479999999   9999999999999864

>2eln_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=96.18  E-value=0.0028  Score=42.37  Aligned_cols=28  Identities=18%  Similarity=0.357  Sum_probs=24.9

Q ss_pred             CCCCCcccccC--cCCccCChHHHHHHHhh
Q 015261           61 NATPMTYSCGL--CGKGYRSSKALAQHLNS   88 (410)
Q Consensus        61 ~~~~~~~~C~~--C~K~f~s~~~l~~Hl~s   88 (410)
                      +.++++|.|..  |+|.|.....|..|++.
T Consensus         4 ~~gekp~~C~~~~C~k~F~~~~~L~~H~r~   33 (38)
T 2eln_A            4 GSSGILLKCPTDGCDYSTPDKYKLQAHLKV   33 (38)
T ss_dssp             SSCCCCEECSSSSCCCEESCHHHHHHHHHH
T ss_pred             CCCCCCCCCCCCCCCCccCCHHHHHHHHHh
Confidence            35778999986  99999999999999975

>2em6_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=96.18  E-value=0.0021  Score=43.38  Aligned_cols=25  Identities=16%  Similarity=0.487  Sum_probs=22.6

Q ss_pred             CCccccccCCCCcccCCHHHHHHHHHhc
Q 015261          232 RDFMCLYCNDRCHPFNSLEAVRKHMEAK  259 (410)
Q Consensus       232 ~~~~Cl~C~~~gk~F~s~~alr~HM~~k  259 (410)
                      .+|.|..|+   +.|.+...|+.||+..
T Consensus        11 k~~~C~~C~---k~f~~~~~L~~H~~~H   35 (46)
T 2em6_A           11 KCYKCDVCG---KEFSQSSHLQTHQRVH   35 (46)
T ss_dssp             CCCBCSSSC---CBCSSHHHHHHHHTTT
T ss_pred             CCeECCCCC---cccCCHHHHHHHHHHc
Confidence            479999999   9999999999999753

>2en3_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=96.18  E-value=0.0022  Score=43.22  Aligned_cols=28  Identities=29%  Similarity=0.547  Sum_probs=25.2

Q ss_pred             CCCCCcccccCcCCccCChHHHHHHHhh
Q 015261           61 NATPMTYSCGLCGKGYRSSKALAQHLNS   88 (410)
Q Consensus        61 ~~~~~~~~C~~C~K~f~s~~~l~~Hl~s   88 (410)
                      +.++++|.|.+|+|.|.....|..|++.
T Consensus         7 H~~~k~~~C~~C~k~F~~~~~L~~H~~~   34 (46)
T 2en3_A            7 GTGEKPFQCKECGMNFSWSCSLFKHLRS   34 (46)
T ss_dssp             SCCCCSEECSSSCCEESSSHHHHHHHHH
T ss_pred             cCCCCCeeCcccChhhCCHHHHHHHHHH
Confidence            4567899999999999999999999965

>2yrj_A Zinc finger protein 473; C2H2-type zinc finger, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=96.17  E-value=0.0022  Score=43.17  Aligned_cols=28  Identities=32%  Similarity=0.680  Sum_probs=25.2

Q ss_pred             CCCCCcccccCcCCccCChHHHHHHHhh
Q 015261           61 NATPMTYSCGLCGKGYRSSKALAQHLNS   88 (410)
Q Consensus        61 ~~~~~~~~C~~C~K~f~s~~~l~~Hl~s   88 (410)
                      +.++++|.|.+|+|.|.....|..|++.
T Consensus         7 H~~~~~~~C~~C~k~f~~~~~L~~H~~~   34 (46)
T 2yrj_A            7 GTGEKPYRCGECGKAFAQKANLTQHQRI   34 (46)
T ss_dssp             CCCCCCEECSSSCCEESSHHHHHHHHTT
T ss_pred             CCCCCCeECCCCCCccCCHHHHHHHHHH
Confidence            4567899999999999999999999865

>2elp_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=96.17  E-value=0.0016  Score=41.65  Aligned_cols=27  Identities=19%  Similarity=0.294  Sum_probs=24.9

Q ss_pred             CCcccCCCCCCCCCh-hHHhhhhhhhhc
Q 015261          181 DPACCFMCDLPHDAI-ENCMVHMHKCHG  207 (410)
Q Consensus       181 ~p~~ClfC~~~f~~~-~~~~~HM~~~Hg  207 (410)
                      .|+.|.+|++.|... ..|..||.+|.|
T Consensus         8 k~~~C~~C~k~f~~~~~~L~~H~~~H~~   35 (37)
T 2elp_A            8 RAMKCPYCDFYFMKNGSDLQRHIWAHEG   35 (37)
T ss_dssp             CCEECSSSSCEECSSCHHHHHHHHHHHT
T ss_pred             CCeECCCCChhhccCHHHHHHHHHhcCC
Confidence            689999999999999 999999998765

>1paa_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=96.17  E-value=0.0028  Score=38.14  Aligned_cols=26  Identities=15%  Similarity=0.305  Sum_probs=22.5

Q ss_pred             CcccCCCCCCCCChhHHhhh-hhhhhc
Q 015261          182 PACCFMCDLPHDAIENCMVH-MHKCHG  207 (410)
Q Consensus       182 p~~ClfC~~~f~~~~~~~~H-M~~~Hg  207 (410)
                      |+.|..|++.|.+...|..| +.+|.|
T Consensus         2 ~~~C~~C~k~f~~~~~l~~H~~~~H~~   28 (30)
T 1paa_A            2 AYACGLCNRAFTRRDLLIRHAQKIHSG   28 (30)
T ss_dssp             CSBCTTTCCBCSSSHHHHHHHTTTSCC
T ss_pred             CcCCcccCcccCChHHHHHHHHHHccC
Confidence            68999999999999999999 566544

>1zu1_A DSRBP-ZFA, RNA binding protein ZFA; zinc finger protein, helix-loop-helix, helix-turn-helix; NMR {Xenopus laevis} SCOP: g.37.1.4 g.37.1.4

Probab=96.17  E-value=0.016  Score=49.24  Aligned_cols=32  Identities=22%  Similarity=0.345  Sum_probs=28.8

Q ss_pred             CcccccCcCCccCChHHHHHHHhhhhhhhhhc
Q 015261           65 MTYSCGLCGKGYRSSKALAQHLNSRSHIMRAS   96 (410)
Q Consensus        65 ~~~~C~~C~K~f~s~~~l~~Hl~skkHk~~~~   96 (410)
                      .++.|.+|+..|.+...+..|..+++|+.+..
T Consensus        31 ~~~~C~~C~v~~~S~s~~~~H~~gkkH~~~v~   62 (127)
T 1zu1_A           31 SDTQCKVCSAVLISESQKLAHYQSRKHANKVR   62 (127)
T ss_dssp             CSSEETTTTEECCSHHHHHHHHHCHHHHHHHH
T ss_pred             CCCcCcCCCCEeCCHHHHHHHHCcHHHHHHHH
Confidence            46889999999999999999999999988644

>2lvu_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, transcription; NMR {Homo sapiens}

Probab=95.16  E-value=0.00083  Score=39.50  Aligned_cols=23  Identities=17%  Similarity=0.543  Sum_probs=22.0

Q ss_pred             CCcccccccccCChHHHhhhhhh
Q 015261            3 GLTCNSCNREFNDDAEQKLHYKS   25 (410)
Q Consensus         3 ~ftC~~C~~~F~~~~~qr~H~ks   25 (410)
                      +|.|..|+..|.....|+.|+++
T Consensus         2 p~~C~~C~k~f~~~~~l~~H~~~   24 (26)
T 2lvu_A            2 PYVCERCGKRFVQSSQLANHIRH   24 (26)
Confidence            79999999999999999999987

>1ard_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 PDB: 1arf_A 1are_A

Probab=96.16  E-value=0.0031  Score=37.52  Aligned_cols=23  Identities=22%  Similarity=0.728  Sum_probs=21.5

Q ss_pred             cccccCcCCccCChHHHHHHHhh
Q 015261           66 TYSCGLCGKGYRSSKALAQHLNS   88 (410)
Q Consensus        66 ~~~C~~C~K~f~s~~~l~~Hl~s   88 (410)
                      +|.|.+|++.|.....|..|++.
T Consensus         2 ~~~C~~C~~~f~~~~~l~~H~~~   24 (29)
T 1ard_A            2 SFVCEVCTRAFARQEHLKRHYRS   24 (29)
T ss_dssp             CCBCTTTCCBCSSHHHHHHHHHH
T ss_pred             CeECCCCCcccCCHHHHHHHHHH
Confidence            68999999999999999999976

>2eou_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=96.16  E-value=0.0029  Score=42.29  Aligned_cols=28  Identities=36%  Similarity=0.538  Sum_probs=25.2

Q ss_pred             CCCCCcccccCcCCccCChHHHHHHHhh
Q 015261           61 NATPMTYSCGLCGKGYRSSKALAQHLNS   88 (410)
Q Consensus        61 ~~~~~~~~C~~C~K~f~s~~~l~~Hl~s   88 (410)
                      +.++++|.|.+|+|.|.....|..|++.
T Consensus         7 h~~~~~~~C~~C~k~f~~~~~L~~H~~~   34 (44)
T 2eou_A            7 GAAKTTSECQECGKIFRHSSLLIEHQAL   34 (44)
T ss_dssp             CSSSCCCCCTTTCCCCSSHHHHHHHHHH
T ss_pred             CCCCcCeECCCCCcccCCHHHHHHHHHH
Confidence            4567899999999999999999999875

>2m0d_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=96.15  E-value=0.0025  Score=38.05  Aligned_cols=24  Identities=25%  Similarity=0.800  Sum_probs=22.0

Q ss_pred             CcccccCcCCccCChHHHHHHHhh
Q 015261           65 MTYSCGLCGKGYRSSKALAQHLNS   88 (410)
Q Consensus        65 ~~~~C~~C~K~f~s~~~l~~Hl~s   88 (410)
                      ++|.|..|++.|.....|..|++.
T Consensus         2 k~~~C~~C~~~f~~~~~l~~H~~~   25 (30)
T 2m0d_A            2 KPYQCDYCGRSFSDPTSKMRHLET   25 (30)
T ss_dssp             CCEECTTTCCEESCHHHHHHHHHT
T ss_pred             cCccCCCCCcccCCHHHHHHHHHH
Confidence            579999999999999999999875

>2ytf_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=96.14  E-value=0.0019  Score=43.44  Aligned_cols=25  Identities=24%  Similarity=0.550  Sum_probs=22.8

Q ss_pred             CCccccccCCCCcccCCHHHHHHHHHhc
Q 015261          232 RDFMCLYCNDRCHPFNSLEAVRKHMEAK  259 (410)
Q Consensus       232 ~~~~Cl~C~~~gk~F~s~~alr~HM~~k  259 (410)
                      .+|.|..|+   +.|.+...|+.||+..
T Consensus        11 k~~~C~~C~---k~f~~~~~L~~H~~~H   35 (46)
T 2ytf_A           11 KPFECSECQ---KAFNTKSNLIVHQRTH   35 (46)
T ss_dssp             CSEECSSSC---CEESSHHHHHHHHHTS
T ss_pred             CCcCCCCCC---cccCCHHHHHHHHHHh
Confidence            479999999   9999999999999863

>1rim_A E6APC2 peptide; E6-binding domain, zinc finger, human papillomavirus, HPV E6 protein, de novo protein; NMR {Synthetic} SCOP: k.12.1.1

Probab=96.13  E-value=0.0031  Score=39.65  Aligned_cols=23  Identities=26%  Similarity=0.644  Sum_probs=21.4

Q ss_pred             cccccCcCCccCChHHHHHHHhh
Q 015261           66 TYSCGLCGKGYRSSKALAQHLNS   88 (410)
Q Consensus        66 ~~~C~~C~K~f~s~~~l~~Hl~s   88 (410)
                      +|.|.+|+|.|.....|..|++.
T Consensus         2 p~~C~~C~k~F~~~~~L~~H~~~   24 (33)
T 1rim_A            2 KFACPECPKRFMRSDHLSKHITL   24 (33)
T ss_dssp             CCCCSSSCCCCSSHHHHHHHHHH
T ss_pred             cccCCCCCchhCCHHHHHHHHHH
Confidence            68999999999999999999975

>2eom_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=96.13  E-value=0.0035  Score=42.32  Aligned_cols=28  Identities=21%  Similarity=0.323  Sum_probs=25.3

Q ss_pred             CCCCCcccccCcCCccCChHHHHHHHhh
Q 015261           61 NATPMTYSCGLCGKGYRSSKALAQHLNS   88 (410)
Q Consensus        61 ~~~~~~~~C~~C~K~f~s~~~l~~Hl~s   88 (410)
                      +.++++|.|.+|+|.|.....|..|++.
T Consensus         7 h~~~k~~~C~~C~k~F~~~~~L~~H~~~   34 (46)
T 2eom_A            7 GHGERGHRCSDCGKFFLQASNFIQHRRI   34 (46)
T ss_dssp             CCCCSSCCCSSSCCCCSSHHHHHHHHHH
T ss_pred             CCCCCCcCCCCCCCeeCChHHHHHHHHH
Confidence            5577899999999999999999999875

>2yto_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=96.12  E-value=0.0019  Score=43.69  Aligned_cols=25  Identities=16%  Similarity=0.530  Sum_probs=23.0

Q ss_pred             CCccccccCCCCcccCCHHHHHHHHHhc
Q 015261          232 RDFMCLYCNDRCHPFNSLEAVRKHMEAK  259 (410)
Q Consensus       232 ~~~~Cl~C~~~gk~F~s~~alr~HM~~k  259 (410)
                      .++.|..|+   +.|.+...|+.||+..
T Consensus        11 k~~~C~~C~---k~f~~~~~L~~H~~~H   35 (46)
T 2yto_A           11 KPYKCSDCG---KAFTRKSGLHIHQQSH   35 (46)
T ss_dssp             CCEECSSSC---CEESSHHHHHHHHHHH
T ss_pred             CCEECcccC---CccCCHhHHHHHHHHc
Confidence            479999999   9999999999999874

>2eow_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=96.11  E-value=0.0019  Score=43.50  Aligned_cols=25  Identities=16%  Similarity=0.495  Sum_probs=22.8

Q ss_pred             CCccccccCCCCcccCCHHHHHHHHHhc
Q 015261          232 RDFMCLYCNDRCHPFNSLEAVRKHMEAK  259 (410)
Q Consensus       232 ~~~~Cl~C~~~gk~F~s~~alr~HM~~k  259 (410)
                      .++.|..|+   +.|.+...|+.||+..
T Consensus        11 k~~~C~~C~---k~f~~~~~L~~H~~~H   35 (46)
T 2eow_A           11 KPYKCNECG---KAFRARSSLAIHQATH   35 (46)
T ss_dssp             CCEECTTSC---CEESSHHHHHHHHHHH
T ss_pred             CCeeccccC---ChhcCHHHHHHHHHHc
Confidence            479999999   9999999999999874

>2emb_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=96.11  E-value=0.0025  Score=42.47  Aligned_cols=28  Identities=29%  Similarity=0.530  Sum_probs=25.0

Q ss_pred             CCCCCcccccCcCCccCChHHHHHHHhh
Q 015261           61 NATPMTYSCGLCGKGYRSSKALAQHLNS   88 (410)
Q Consensus        61 ~~~~~~~~C~~C~K~f~s~~~l~~Hl~s   88 (410)
                      +.++++|.|.+|+|.|.....|..|++.
T Consensus         7 H~~~k~~~C~~C~k~f~~~~~L~~H~~~   34 (44)
T 2emb_A            7 GHTRKRYECSKCQATFNLRKHLIQHQKT   34 (44)
T ss_dssp             CCCCSSEECTTTCCEESCHHHHHHHGGG
T ss_pred             cCCCCCeECCCCCCccCCHHHHHHHHHH
Confidence            4567889999999999999999999975

>1njq_A Superman protein; zinc-finger, peptide-zinc complex, beta-BETA-ALFA motif, metal binding protein; NMR {Synthetic} SCOP: g.37.1.3 PDB: 2l1o_A

Probab=96.10  E-value=0.0018  Score=42.10  Aligned_cols=27  Identities=15%  Similarity=0.225  Sum_probs=25.1

Q ss_pred             CCcccCCCCCCCCChhHHhhhhhhhhc
Q 015261          181 DPACCFMCDLPHDAIENCMVHMHKCHG  207 (410)
Q Consensus       181 ~p~~ClfC~~~f~~~~~~~~HM~~~Hg  207 (410)
                      .|+.|..|++.|.+...|..||.+|+|
T Consensus         5 k~~~C~~C~k~f~~~~~L~~H~~~H~~   31 (39)
T 1njq_A            5 RSYTCSFCKREFRSAQALGGHMNVHRR   31 (39)
T ss_dssp             SSEECTTTCCEESSHHHHHHHHHTTCC
T ss_pred             CceECCCCCcccCCHHHHHHHHHHcCC
Confidence            578999999999999999999999776

>2yrm_A B-cell lymphoma 6 protein; ZF-C2H2, zinc binding, DNA binding, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=96.10  E-value=0.0041  Score=41.45  Aligned_cols=28  Identities=14%  Similarity=0.350  Sum_probs=25.3

Q ss_pred             CCCCCcccccCcCCccCChHHHHHHHhh
Q 015261           61 NATPMTYSCGLCGKGYRSSKALAQHLNS   88 (410)
Q Consensus        61 ~~~~~~~~C~~C~K~f~s~~~l~~Hl~s   88 (410)
                      +.++++|.|.+|+|.|.....|..|++.
T Consensus         5 h~~~k~~~C~~C~k~f~~~~~L~~H~~~   32 (43)
T 2yrm_A            5 SSGNGAFFCNECDCRFSEEASLKRHTLQ   32 (43)
T ss_dssp             CSSSCCBCCSSSCCCBSSHHHHHHHHHH
T ss_pred             cCCCCCEECCCCCCeeCChHHHHHHHHh
Confidence            4577899999999999999999999975

>1zfd_A SWI5; DNA binding motif, zinc finger DNA binding domain; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=96.09  E-value=0.0035  Score=38.52  Aligned_cols=27  Identities=19%  Similarity=0.282  Sum_probs=24.5

Q ss_pred             CCcccC--CCCCCCCChhHHhhhhhhhhc
Q 015261          181 DPACCF--MCDLPHDAIENCMVHMHKCHG  207 (410)
Q Consensus       181 ~p~~Cl--fC~~~f~~~~~~~~HM~~~Hg  207 (410)
                      .|+.|.  .|++.|.....|..||.+|+|
T Consensus         2 k~~~C~~~~C~k~f~~~~~L~~H~~~H~~   30 (32)
T 1zfd_A            2 RPYSCDHPGCDKAFVRNHDLIRHKKSHQE   30 (32)
T ss_dssp             CSBCCCCTTCCCCBSSSHHHHHHHGGGTC
T ss_pred             CCCcCcCCCCCCccCCHHHHHHHHHHccC
Confidence            478999  899999999999999999765

>2epv_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=96.08  E-value=0.0022  Score=42.92  Aligned_cols=25  Identities=16%  Similarity=0.332  Sum_probs=22.8

Q ss_pred             CCccccccCCCCcccCCHHHHHHHHHhc
Q 015261          232 RDFMCLYCNDRCHPFNSLEAVRKHMEAK  259 (410)
Q Consensus       232 ~~~~Cl~C~~~gk~F~s~~alr~HM~~k  259 (410)
                      .+|.|..|+   +.|.+...|+.||+..
T Consensus        11 k~~~C~~C~---k~F~~~~~L~~H~~~H   35 (44)
T 2epv_A           11 KPYECNECG---KAFIWKSLLIVHERTH   35 (44)
T ss_dssp             CSEECSSSC---CEESSHHHHHHHHGGG
T ss_pred             cCeECCCCC---cccCchHHHHHHHhHh
Confidence            479999999   9999999999999863

>2eoj_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=96.08  E-value=0.0021  Score=42.84  Aligned_cols=24  Identities=17%  Similarity=0.494  Sum_probs=22.3

Q ss_pred             CCccccccCCCCcccCCHHHHHHHHHh
Q 015261          232 RDFMCLYCNDRCHPFNSLEAVRKHMEA  258 (410)
Q Consensus       232 ~~~~Cl~C~~~gk~F~s~~alr~HM~~  258 (410)
                      .++.|..|+   +.|.+...|+.||+.
T Consensus        11 k~~~C~~C~---k~f~~~~~L~~H~~~   34 (44)
T 2eoj_A           11 NPYECCECG---KVFSRKDQLVSHQKT   34 (44)
T ss_dssp             CSCEETTTT---EECSSHHHHHHHHTT
T ss_pred             cCeeCCCCC---CccCCHHHHHHHHHH
Confidence            479999999   999999999999986

>2epu_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=95.99  E-value=0.0029  Score=42.45  Aligned_cols=28  Identities=25%  Similarity=0.602  Sum_probs=25.3

Q ss_pred             CCCCCcccccCcCCccCChHHHHHHHhh
Q 015261           61 NATPMTYSCGLCGKGYRSSKALAQHLNS   88 (410)
Q Consensus        61 ~~~~~~~~C~~C~K~f~s~~~l~~Hl~s   88 (410)
                      +.++++|.|.+|+|.|.....|..|++.
T Consensus         7 h~~~k~~~C~~C~k~F~~~~~L~~H~~~   34 (45)
T 2epu_A            7 GTGQKPFECTHCGKSFRAKGNLVTHQRI   34 (45)
T ss_dssp             CCSCCSEEETTTTEEESSHHHHHHHHTT
T ss_pred             CCCCcCccCCCCCCccCChHHHHHHHHH
Confidence            5677899999999999999999999875

>1rik_A E6APC1 peptide; E6-binding domain, zinc finger, human papillomavirus, HPV E6 protein, de novo protein; NMR {Synthetic} SCOP: k.12.1.1 PDB: 1sp1_A 1va3_A

Probab=95.98  E-value=0.0024  Score=38.13  Aligned_cols=23  Identities=22%  Similarity=0.504  Sum_probs=22.2

Q ss_pred             CCcccccccccCChHHHhhhhhh
Q 015261            3 GLTCNSCNREFNDDAEQKLHYKS   25 (410)
Q Consensus         3 ~ftC~~C~~~F~~~~~qr~H~ks   25 (410)
                      +|.|..|+..|.....|+.|+++
T Consensus         2 ~~~C~~C~k~f~~~~~l~~H~~~   24 (29)
T 1rik_A            2 KFACPECPKRFMRSDHLTLHILL   24 (29)
T ss_dssp             CEECSSSSCEESCSHHHHHHHTG
T ss_pred             CccCCCCCchhCCHHHHHHHHHH
Confidence            79999999999999999999998

>2eq3_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=95.97  E-value=0.0023  Score=43.06  Aligned_cols=24  Identities=17%  Similarity=0.509  Sum_probs=22.2

Q ss_pred             CCccccccCCCCcccCCHHHHHHHHHh
Q 015261          232 RDFMCLYCNDRCHPFNSLEAVRKHMEA  258 (410)
Q Consensus       232 ~~~~Cl~C~~~gk~F~s~~alr~HM~~  258 (410)
                      .++.|..|+   +.|.+...|+.||+.
T Consensus        11 k~~~C~~C~---k~f~~~~~L~~H~~~   34 (46)
T 2eq3_A           11 KPYECNQCG---KAFSVRSSLTTHQAI   34 (46)
T ss_dssp             CSSEETTTT---EECSSHHHHHHHHTT
T ss_pred             CCeECCCCC---hhhCCHHHHHHHHHH
Confidence            479999999   999999999999975

>2eox_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=95.95  E-value=0.0018  Score=43.22  Aligned_cols=28  Identities=25%  Similarity=0.589  Sum_probs=25.2

Q ss_pred             CCCCCcccccCcCCccCChHHHHHHHhh
Q 015261           61 NATPMTYSCGLCGKGYRSSKALAQHLNS   88 (410)
Q Consensus        61 ~~~~~~~~C~~C~K~f~s~~~l~~Hl~s   88 (410)
                      +.++++|.|.+|+|.|.....|..|++.
T Consensus         7 H~~~~~~~C~~C~k~F~~~~~L~~H~~~   34 (44)
T 2eox_A            7 GTDSKSYNCNECGKAFTRIFHLTRHQKI   34 (44)
T ss_dssp             CCCCCCEEETTTTEEESSSHHHHTTHHH
T ss_pred             CCCCCCeECcccCcccCCHHHHHHHHHH
Confidence            4567899999999999999999999875

>2m0e_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=95.85  E-value=0.0045  Score=36.56  Aligned_cols=23  Identities=26%  Similarity=0.509  Sum_probs=21.3

Q ss_pred             cccccCcCCccCChHHHHHHHhh
Q 015261           66 TYSCGLCGKGYRSSKALAQHLNS   88 (410)
Q Consensus        66 ~~~C~~C~K~f~s~~~l~~Hl~s   88 (410)
                      +|.|..|++.|.....|..|++.
T Consensus         2 ~~~C~~C~~~f~~~~~l~~H~~~   24 (29)
T 2m0e_A            2 EHKCPHCDKKFNQVGNLKAHLKI   24 (29)
T ss_dssp             CCCCSSCCCCCCTTTHHHHHHHH
T ss_pred             CCcCCCCCcccCCHHHHHHHHHH
Confidence            68999999999999999999875

>2m0f_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=95.80  E-value=0.0044  Score=36.71  Aligned_cols=23  Identities=35%  Similarity=0.710  Sum_probs=21.4

Q ss_pred             cccccCcCCccCChHHHHHHHhh
Q 015261           66 TYSCGLCGKGYRSSKALAQHLNS   88 (410)
Q Consensus        66 ~~~C~~C~K~f~s~~~l~~Hl~s   88 (410)
                      +|.|.+|++.|.....|..|++.
T Consensus         2 ~~~C~~C~k~f~~~~~l~~H~~~   24 (29)
T 2m0f_A            2 PLKCRECGKQFTTSGNLKRHLRI   24 (29)
T ss_dssp             CEECTTTSCEESCHHHHHHHHHH
T ss_pred             CccCCCCCCccCChhHHHHHHHH
Confidence            68999999999999999999975

>1klr_A Zinc finger Y-chromosomal protein; transcription; NMR {Synthetic} SCOP: g.37.1.1 PDB: 5znf_A 1kls_A 1xrz_A* 7znf_A

Probab=95.79  E-value=0.0054  Score=36.52  Aligned_cols=23  Identities=30%  Similarity=0.610  Sum_probs=21.3

Q ss_pred             cccccCcCCccCChHHHHHHHhh
Q 015261           66 TYSCGLCGKGYRSSKALAQHLNS   88 (410)
Q Consensus        66 ~~~C~~C~K~f~s~~~l~~Hl~s   88 (410)
                      +|.|.+|++.|.....|..|++.
T Consensus         2 ~~~C~~C~k~f~~~~~l~~H~~~   24 (30)
T 1klr_A            2 TYQCQYCEFRSADSSNLKTHIKT   24 (30)
T ss_dssp             CCCCSSSSCCCSCSHHHHHHHHH
T ss_pred             CccCCCCCCccCCHHHHHHHHHH
Confidence            68999999999999999999875

>2ab3_A ZNF29; zinc finger protein, beta BETA alpha, RREIIB-TR, RNA binding protein; NMR {Escherichia coli} SCOP: k.12.1.1 PDB: 2ab7_A

Probab=95.78  E-value=0.0028  Score=37.73  Aligned_cols=26  Identities=15%  Similarity=0.232  Sum_probs=23.5

Q ss_pred             CcccC--CCCCCCCChhHHhhhhhhhhc
Q 015261          182 PACCF--MCDLPHDAIENCMVHMHKCHG  207 (410)
Q Consensus       182 p~~Cl--fC~~~f~~~~~~~~HM~~~Hg  207 (410)
                      |+.|.  .|++.|.+...|..||++|.|
T Consensus         2 ~~~C~~~~C~k~f~~~~~l~~H~~~H~~   29 (29)
T 2ab3_A            2 VYVCHFENCGRSFNDRRKLNRHKKIHTG   29 (29)
T ss_dssp             CEEECSTTTCEEESSHHHHHHHHGGGTC
T ss_pred             CCCCcCCcCcCccCCHHHHHHHHHHhCC
Confidence            67899  999999999999999998754

>2eoy_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=95.77  E-value=0.0022  Score=43.36  Aligned_cols=25  Identities=20%  Similarity=0.491  Sum_probs=22.5

Q ss_pred             CCccccccCCCCcccCCHHHHHHHHHhc
Q 015261          232 RDFMCLYCNDRCHPFNSLEAVRKHMEAK  259 (410)
Q Consensus       232 ~~~~Cl~C~~~gk~F~s~~alr~HM~~k  259 (410)
                      .+|.|..|+   +.|.+...|+.||+..
T Consensus        11 k~~~C~~C~---k~f~~~~~L~~H~~~H   35 (46)
T 2eoy_A           11 KCFKCNKCE---KTFSCSKYLTQHERIH   35 (46)
T ss_dssp             CCEECSSSC---CEESSSHHHHHHHTTC
T ss_pred             CCEECcCCC---CcCCCHHHHHHHHHHc
Confidence            479999999   9999999999999753

>1va1_A Transcription factor SP1; C2H2 type zinc finger, DNA-binding protein; NMR {Homo sapiens}

Probab=95.74  E-value=0.0059  Score=39.21  Aligned_cols=28  Identities=29%  Similarity=0.507  Sum_probs=24.6

Q ss_pred             CCCCCcccccC--cCCccCChHHHHHHHhh
Q 015261           61 NATPMTYSCGL--CGKGYRSSKALAQHLNS   88 (410)
Q Consensus        61 ~~~~~~~~C~~--C~K~f~s~~~l~~Hl~s   88 (410)
                      +.++++|.|.+  |+|.|.....|..|++.
T Consensus         3 ~~~~k~~~C~~~~C~k~f~~~~~L~~H~~~   32 (37)
T 1va1_A            3 PGKKKQHICHIQGCGKVYGKTSHLRAHLRW   32 (37)
T ss_dssp             SSSCCCEECCSTTCCCEESCHHHHHHHHHH
T ss_pred             CCCCCCCCCCCCCCCCccCCHHHHHHHHHh
Confidence            35678999995  99999999999999875

>2lvt_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, transcription; NMR {Homo sapiens}

Probab=94.55  E-value=0.0022  Score=38.50  Aligned_cols=23  Identities=17%  Similarity=0.460  Sum_probs=22.0

Q ss_pred             CCcccccccccCChHHHhhhhhh
Q 015261            3 GLTCNSCNREFNDDAEQKLHYKS   25 (410)
Q Consensus         3 ~ftC~~C~~~F~~~~~qr~H~ks   25 (410)
                      +|.|..|+..|.....|+.|+++
T Consensus         2 ~~~C~~C~k~f~~~~~l~~H~~~   24 (29)
T 2lvt_A            2 PCQCVMCGKAFTQASSLIAHVRQ   24 (29)
Confidence            79999999999999999999997

>1paa_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=95.49  E-value=0.0062  Score=36.49  Aligned_cols=23  Identities=30%  Similarity=0.501  Sum_probs=21.3

Q ss_pred             CCcccccccccCChHHHhhh-hhh
Q 015261            3 GLTCNSCNREFNDDAEQKLH-YKS   25 (410)
Q Consensus         3 ~ftC~~C~~~F~~~~~qr~H-~ks   25 (410)
                      +|.|..|+..|.....|+.| +++
T Consensus         2 ~~~C~~C~k~f~~~~~l~~H~~~~   25 (30)
T 1paa_A            2 AYACGLCNRAFTRRDLLIRHAQKI   25 (30)
T ss_dssp             CSBCTTTCCBCSSSHHHHHHHTTT
T ss_pred             CcCCcccCcccCChHHHHHHHHHH
Confidence            79999999999999999999 566

>1zfd_A SWI5; DNA binding motif, zinc finger DNA binding domain; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=95.48  E-value=0.0094  Score=36.50  Aligned_cols=24  Identities=33%  Similarity=0.648  Sum_probs=22.1

Q ss_pred             Cccccc--CcCCccCChHHHHHHHhh
Q 015261           65 MTYSCG--LCGKGYRSSKALAQHLNS   88 (410)
Q Consensus        65 ~~~~C~--~C~K~f~s~~~l~~Hl~s   88 (410)
                      ++|.|.  .|+|.|.....|..|++.
T Consensus         2 k~~~C~~~~C~k~f~~~~~L~~H~~~   27 (32)
T 1zfd_A            2 RPYSCDHPGCDKAFVRNHDLIRHKKS   27 (32)
T ss_dssp             CSBCCCCTTCCCCBSSSHHHHHHHGG
T ss_pred             CCCcCcCCCCCCccCCHHHHHHHHHH
Confidence            578999  899999999999999976

>3iuf_A Zinc finger protein UBI-D4; structural genomics consortium (SGC), C2H2, APO metal-binding, nucleus, phosphoprotein, transcription, TRAN regulation; 1.80A {Homo sapiens}

Probab=95.47  E-value=0.0043  Score=42.73  Aligned_cols=27  Identities=15%  Similarity=0.229  Sum_probs=24.7

Q ss_pred             CCcccCCCCCCCCChhHHhhhhh-hhhc
Q 015261          181 DPACCFMCDLPHDAIENCMVHMH-KCHG  207 (410)
Q Consensus       181 ~p~~ClfC~~~f~~~~~~~~HM~-~~Hg  207 (410)
                      .|+.|.+|++.|.....|..||+ +|.|
T Consensus         6 kp~~C~~C~k~F~~~~~L~~H~~~~H~~   33 (48)
T 3iuf_A            6 KPYACDICGKRYKNRPGLSYHYAHSHLA   33 (48)
T ss_dssp             SCEECTTTCCEESSHHHHHHHHHHSSCC
T ss_pred             cCEECCCcCcccCCHHHHHHHhhhhcCC
Confidence            68999999999999999999999 7655

>1va1_A Transcription factor SP1; C2H2 type zinc finger, DNA-binding protein; NMR {Homo sapiens}

Probab=95.45  E-value=0.0054  Score=39.41  Aligned_cols=27  Identities=15%  Similarity=0.324  Sum_probs=24.7

Q ss_pred             CCcccCC--CCCCCCChhHHhhhhhhhhc
Q 015261          181 DPACCFM--CDLPHDAIENCMVHMHKCHG  207 (410)
Q Consensus       181 ~p~~Clf--C~~~f~~~~~~~~HM~~~Hg  207 (410)
                      .|+.|.+  |++.|.....|..||.+|.|
T Consensus         7 k~~~C~~~~C~k~f~~~~~L~~H~~~H~~   35 (37)
T 1va1_A            7 KQHICHIQGCGKVYGKTSHLRAHLRWHTG   35 (37)
T ss_dssp             CCEECCSTTCCCEESCHHHHHHHHHHHHT
T ss_pred             CCCCCCCCCCCCccCCHHHHHHHHHhcCC
Confidence            6899996  99999999999999999766

>2epp_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=95.43  E-value=0.0089  Score=45.01  Aligned_cols=28  Identities=32%  Similarity=0.583  Sum_probs=25.2

Q ss_pred             CCCCCcccccCcCCccCChHHHHHHHhh
Q 015261           61 NATPMTYSCGLCGKGYRSSKALAQHLNS   88 (410)
Q Consensus        61 ~~~~~~~~C~~C~K~f~s~~~l~~Hl~s   88 (410)
                      +..+++|.|..|+|.|.....|..|++.
T Consensus         8 ~~~ekpy~C~~CgK~F~~~s~L~~H~r~   35 (66)
T 2epp_A            8 LREAGILPCGLCGKVFTDANRLRQHEAQ   35 (66)
T ss_dssp             CCCCCCCCCTTTCCCCSCHHHHHHHHHH
T ss_pred             CCCccCcCCCCCCCccCCHHHHHhhhhh
Confidence            3467899999999999999999999986

>2lvr_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, classical zinc finger, transcription; NMR {Homo sapiens}

Probab=94.41  E-value=0.0026  Score=38.22  Aligned_cols=24  Identities=25%  Similarity=0.551  Sum_probs=22.7

Q ss_pred             CCCcccccccccCChHHHhhhhhh
Q 015261            2 PGLTCNSCNREFNDDAEQKLHYKS   25 (410)
Q Consensus         2 ~~ftC~~C~~~F~~~~~qr~H~ks   25 (410)
                      .+|.|..|+..|.....|+.|+++
T Consensus         2 k~~~C~~C~k~f~~~~~l~~H~~~   25 (30)
T 2lvr_A            2 KPYVCIHCQRQFADPGALQRHVRI   25 (30)
Confidence            579999999999999999999997

>1zw8_A Zinc-responsive transcriptional regulator ZAP1; interacting C2H2 zinc fingers, beta-BETA-alpha, solution structure; NMR {Saccharomyces cerevisiae}

Probab=95.31  E-value=0.011  Score=44.07  Aligned_cols=54  Identities=15%  Similarity=0.222  Sum_probs=39.1

Q ss_pred             CCCCCCCChhHHhhhhhhhhcCCCCCcccccChHHHHHHHHhHhcCCccccc--cCCCCcccCCHHHHHHHHHhc
Q 015261          187 MCDLPHDAIENCMVHMHKCHGFFIPDVEYLKDPKGLLTYLGLKVKRDFMCLY--CNDRCHPFNSLEAVRKHMEAK  259 (410)
Q Consensus       187 fC~~~f~~~~~~~~HM~~~Hgf~ip~~~~lvd~~gLl~yl~~ki~~~~~Cl~--C~~~gk~F~s~~alr~HM~~k  259 (410)
                      -|++.|.+.+.|+.|+...|-...+.                .-...+.|.|  |+   +.+.....|..|++.+
T Consensus         8 ~C~~~f~~~~~l~~Hv~~~Hv~~~~~----------------~~~~~~~C~W~~C~---~~~~~~~~L~~Hir~~   63 (64)
T 1zw8_A            8 ECPESASSLFDLQRHLLKDHVSQDFK----------------HPMEPLACNWEDCD---FLGDDTASIVNHINAQ   63 (64)
T ss_dssp             TCCCCCSSHHHHHHHHHHHSCCCCCC----------------CSSCCEECCCSSCC---CEESSHHHHHHHHHHH
T ss_pred             CCCCcCCCHHHHHHHHHhhccCcccC----------------CCCCCCEeeCCCCc---CCCCChHHHHhhcccc
Confidence            39999999999999997666311110                0012689995  99   5667778999999976

>2d9k_A FLN29 gene product; zinc finger, ZF-TRAF, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=95.29  E-value=0.0056  Score=46.76  Aligned_cols=51  Identities=25%  Similarity=0.417  Sum_probs=41.7

Q ss_pred             CCCcccCCCCCCCCChhHHhhhhhhhhcCCCCCcccccChHHHHHHHHhHhcCCccccccCCCCcccCCHHHHHHHHHhc
Q 015261          180 FDPACCFMCDLPHDAIENCMVHMHKCHGFFIPDVEYLKDPKGLLTYLGLKVKRDFMCLYCNDRCHPFNSLEAVRKHMEAK  259 (410)
Q Consensus       180 i~p~~ClfC~~~f~~~~~~~~HM~~~Hgf~ip~~~~lvd~~gLl~yl~~ki~~~~~Cl~C~~~gk~F~s~~alr~HM~~k  259 (410)
                      ..|+.|.+|+..|. ...|..|+ .+-|                       ..++.|..|+   +.|. ...|..|+...
T Consensus        15 ~r~~~C~~C~~~~~-~~~L~~H~-~~c~-----------------------~~~~~C~~C~---~~~~-~~~l~~H~~~c   65 (75)
T 2d9k_A           15 LRLAVCQHCDLELS-ILKLKEHE-DYCG-----------------------ARTELCGNCG---RNVL-VKDLKTHPEVC   65 (75)
T ss_dssp             CCCEECSSSCCEEC-HHHHHHHH-HHHH-----------------------HCEEECSSSC---CEEE-TTGGGTHHHHB
T ss_pred             CcccCCcccChHhh-HHHHHHHH-hHcC-----------------------CCceEcccCC---CcCc-HHHHHHHHHHc
Confidence            47899999999994 88999999 6544                       2378999999   7777 58999999864

>2elm_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=95.28  E-value=0.0039  Score=40.08  Aligned_cols=27  Identities=15%  Similarity=0.198  Sum_probs=24.0

Q ss_pred             CCcccCCCCCCCCChhHHhhh-hhhhhc
Q 015261          181 DPACCFMCDLPHDAIENCMVH-MHKCHG  207 (410)
Q Consensus       181 ~p~~ClfC~~~f~~~~~~~~H-M~~~Hg  207 (410)
                      .|+.|..|++.|.....|..| |..|.|
T Consensus         8 k~~~C~~C~k~f~~~~~L~~H~~~~H~~   35 (37)
T 2elm_A            8 HLYYCSQCHYSSITKNCLKRHVIQKHSN   35 (37)
T ss_dssp             CEEECSSSSCEEECHHHHHHHHHHHTCC
T ss_pred             cCeECCCCCcccCCHHHHHHHHHHHccC
Confidence            689999999999999999999 777554

>1sp2_A SP1F2; zinc finger, transcription activation; NMR {Homo sapiens} SCOP: g.37.1.1 PDB: 1va2_A

Probab=95.22  E-value=0.009  Score=36.37  Aligned_cols=23  Identities=22%  Similarity=0.605  Sum_probs=22.0

Q ss_pred             CCccc--ccccccCChHHHhhhhhh
Q 015261            3 GLTCN--SCNREFNDDAEQKLHYKS   25 (410)
Q Consensus         3 ~ftC~--~C~~~F~~~~~qr~H~ks   25 (410)
                      +|.|.  .|+..|.....|+.|+++
T Consensus         2 p~~C~~~~C~k~f~~~~~L~~H~~~   26 (31)
T 1sp2_A            2 PFMCTWSYCGKRFTRSDELQRHKRT   26 (31)
T ss_dssp             CCBCCSTTCCCBCSSHHHHHHHHTT
T ss_pred             CcCCcCCCCCcccCCHhHHHHHHHH
Confidence            79998  999999999999999998

>1bhi_A CRE-BP1, ATF-2; CRE binding protein, transcriptional activation domain, Zn finger, DNA-binding regulatory protein; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=95.20  E-value=0.011  Score=37.78  Aligned_cols=27  Identities=22%  Similarity=0.525  Sum_probs=23.7

Q ss_pred             CCCCccccc--CcCCccCChHHHHHHHhh
Q 015261           62 ATPMTYSCG--LCGKGYRSSKALAQHLNS   88 (410)
Q Consensus        62 ~~~~~~~C~--~C~K~f~s~~~l~~Hl~s   88 (410)
                      .++++|.|.  .|+|.|.....|..|++.
T Consensus         2 ~~~k~~~C~~~~C~k~f~~~~~L~~H~~~   30 (38)
T 1bhi_A            2 SDDKPFLCTAPGCGQRFTNEDHLAVHKHK   30 (38)
T ss_dssp             TTCCCEECCCTTTCCEESSHHHHHHHHHH
T ss_pred             CCCcceECCCCCCCcccCCHHHHHHHHHH
Confidence            356789999  599999999999999975

>2kfq_A FP1; protein, de novo protein; NMR {Synthetic}

Probab=95.19  E-value=0.0021  Score=40.04  Aligned_cols=23  Identities=22%  Similarity=0.574  Sum_probs=22.2

Q ss_pred             CCcccccccccCChHHHhhhhhh
Q 015261            3 GLTCNSCNREFNDDAEQKLHYKS   25 (410)
Q Consensus         3 ~ftC~~C~~~F~~~~~qr~H~ks   25 (410)
                      +|.|..|+..|.....|+.|+++
T Consensus         2 p~~C~~C~k~f~~~~~L~~H~~~   24 (32)
T 2kfq_A            2 AFACPACPKRFMRSDALSKHIKT   24 (32)
T ss_dssp             CSSSSSSCTTHHHHHTTSSSTTS
T ss_pred             CCCCCCCCcccCCHHHHHHHHHH
Confidence            79999999999999999999998

>1bhi_A CRE-BP1, ATF-2; CRE binding protein, transcriptional activation domain, Zn finger, DNA-binding regulatory protein; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=95.11  E-value=0.0078  Score=38.54  Aligned_cols=27  Identities=26%  Similarity=0.413  Sum_probs=24.6

Q ss_pred             CCcccCC--CCCCCCChhHHhhhhhhhhc
Q 015261          181 DPACCFM--CDLPHDAIENCMVHMHKCHG  207 (410)
Q Consensus       181 ~p~~Clf--C~~~f~~~~~~~~HM~~~Hg  207 (410)
                      .|+.|.+  |++.|.....|..||.+|.|
T Consensus         5 k~~~C~~~~C~k~f~~~~~L~~H~~~H~~   33 (38)
T 1bhi_A            5 KPFLCTAPGCGQRFTNEDHLAVHKHKHEM   33 (38)
T ss_dssp             CCEECCCTTTCCEESSHHHHHHHHHHHHT
T ss_pred             cceECCCCCCCcccCCHHHHHHHHHHhCC
Confidence            5799995  99999999999999999776

>2ctu_A Zinc finger protein 483; zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=95.07  E-value=0.0029  Score=46.46  Aligned_cols=23  Identities=13%  Similarity=0.316  Sum_probs=15.4

Q ss_pred             CCcccccccccCChHHHhhhhhh
Q 015261            3 GLTCNSCNREFNDDAEQKLHYKS   25 (410)
Q Consensus         3 ~ftC~~C~~~F~~~~~qr~H~ks   25 (410)
                      +|.|..|+..|.....|+.|+++
T Consensus        39 ~~~C~~C~~~f~~~~~l~~H~~~   61 (73)
T 2ctu_A           39 TPMCEKCRKDSCQEAALNKDEGN   61 (73)
T ss_dssp             SCCCHHHHHTCSCCCSSCCCSSC
T ss_pred             CCCCCCCChhhcCHHHHHHHHHh
Confidence            56666666666666666666665

>1vd4_A Transcription initiation factor IIE, alpha subunit; zinc finger; NMR {Homo sapiens} SCOP: g.41.3.1

Probab=95.07  E-value=0.0037  Score=45.51  Aligned_cols=42  Identities=17%  Similarity=0.301  Sum_probs=32.1

Q ss_pred             CCcccCCCCCCCCChhHHhhhhhhhhcCCCCCcccccChHHHHHHHHhHhcCCccccccCCCCcccCCHHH
Q 015261          181 DPACCFMCDLPHDAIENCMVHMHKCHGFFIPDVEYLKDPKGLLTYLGLKVKRDFMCLYCNDRCHPFNSLEA  251 (410)
Q Consensus       181 ~p~~ClfC~~~f~~~~~~~~HM~~~Hgf~ip~~~~lvd~~gLl~yl~~ki~~~~~Cl~C~~~gk~F~s~~a  251 (410)
                      .|+.|..|++.|.....|.   ..|.|                       ..+|.|..|+   +.|.....
T Consensus        13 k~~~C~~C~k~F~~~~~l~---~~H~~-----------------------~k~~~C~~C~---k~f~~~~~   54 (62)
T 1vd4_A           13 ASFKCPVCSSTFTDLEANQ---LFDPM-----------------------TGTFRCTFCH---TEVEEDES   54 (62)
T ss_dssp             SEEECSSSCCEEEHHHHHH---HEETT-----------------------TTEEBCSSSC---CBCEECTT
T ss_pred             CCccCCCCCchhccHHHhH---hhcCC-----------------------CCCEECCCCC---CccccCcc
Confidence            6899999999999877665   44444                       2479999999   88876543

>1x3c_A Zinc finger protein 292; DNA binding, nuclear protein, C2H2-type zinc finger, KIAA0530, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=94.84  E-value=0.02  Score=44.02  Aligned_cols=27  Identities=22%  Similarity=0.449  Sum_probs=23.7

Q ss_pred             CCcccCC--CCCCCCChhHHhhhhhhhhc
Q 015261          181 DPACCFM--CDLPHDAIENCMVHMHKCHG  207 (410)
Q Consensus       181 ~p~~Clf--C~~~f~~~~~~~~HM~~~Hg  207 (410)
                      .|+.|.+  |++.|.....|..||+..|.
T Consensus        26 KPYkC~~~~CgKaFsr~s~L~~H~rriHT   54 (73)
T 1x3c_A           26 RPYRCVHQGCFAAFTIQQNLILHYQAVHK   54 (73)
T ss_dssp             CSCBCCSTTCCCBCSSHHHHHHHHHHHSS
T ss_pred             CCeECCCCCcChhHcCHHHHHHHhhhhCC
Confidence            7999987  99999999999999964455

>2ab3_A ZNF29; zinc finger protein, beta BETA alpha, RREIIB-TR, RNA binding protein; NMR {Escherichia coli} SCOP: k.12.1.1 PDB: 2ab7_A

Probab=94.52  E-value=0.013  Score=34.57  Aligned_cols=23  Identities=35%  Similarity=0.655  Sum_probs=22.0

Q ss_pred             CCccc--ccccccCChHHHhhhhhh
Q 015261            3 GLTCN--SCNREFNDDAEQKLHYKS   25 (410)
Q Consensus         3 ~ftC~--~C~~~F~~~~~qr~H~ks   25 (410)
                      +|.|.  .|+..|.....|+.|+++
T Consensus         2 ~~~C~~~~C~k~f~~~~~l~~H~~~   26 (29)
T 2ab3_A            2 VYVCHFENCGRSFNDRRKLNRHKKI   26 (29)
T ss_dssp             CEEECSTTTCEEESSHHHHHHHHGG
T ss_pred             CCCCcCCcCcCccCCHHHHHHHHHH
Confidence            68999  999999999999999998

>2d9k_A FLN29 gene product; zinc finger, ZF-TRAF, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=94.41  E-value=0.0062  Score=46.51  Aligned_cols=49  Identities=27%  Similarity=0.395  Sum_probs=38.3

Q ss_pred             CCCcccccccccCChHHHhhhhhhccccchhhhhhcCCCCCCHHHHHHHHHHHHHhhhcCCCCCcccccCcCCccCChHH
Q 015261            2 PGLTCNSCNREFNDDAEQKLHYKSDWHRYNLKRKVAGVPGVTEALFLARQAALAQEKNKNATPMTYSCGLCGKGYRSSKA   81 (410)
Q Consensus         2 ~~ftC~~C~~~F~~~~~qr~H~ksdwHrYNlKRrva~Lppvs~~~F~~k~~~l~~~~~~~~~~~~~~C~~C~K~f~s~~~   81 (410)
                      .++.|..|+..|. ...|..|+ .  |                                 .+++++.|..|++.|. ...
T Consensus        16 r~~~C~~C~~~~~-~~~L~~H~-~--~---------------------------------c~~~~~~C~~C~~~~~-~~~   57 (75)
T 2d9k_A           16 RLAVCQHCDLELS-ILKLKEHE-D--Y---------------------------------CGARTELCGNCGRNVL-VKD   57 (75)
T ss_dssp             CCEECSSSCCEEC-HHHHHHHH-H--H---------------------------------HHHCEEECSSSCCEEE-TTG
T ss_pred             cccCCcccChHhh-HHHHHHHH-h--H---------------------------------cCCCceEcccCCCcCc-HHH
Confidence            3688999999995 78888887 4  2                                 1346899999999887 477


Q ss_pred             HHHHHhh
Q 015261           82 LAQHLNS   88 (410)
Q Consensus        82 l~~Hl~s   88 (410)
                      |..|++.
T Consensus        58 l~~H~~~   64 (75)
T 2d9k_A           58 LKTHPEV   64 (75)
T ss_dssp             GGTHHHH
T ss_pred             HHHHHHH
Confidence            8889863

>1x6f_A Zinc finger protein 462; zinc finger domain, KIAA1803, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=94.23  E-value=0.01  Score=46.91  Aligned_cols=27  Identities=15%  Similarity=0.257  Sum_probs=25.1

Q ss_pred             CCcccCCCCCCCCChhHHhhhhhhhhc
Q 015261          181 DPACCFMCDLPHDAIENCMVHMHKCHG  207 (410)
Q Consensus       181 ~p~~ClfC~~~f~~~~~~~~HM~~~Hg  207 (410)
                      .|+.|..|++.|.....|..||.+|.|
T Consensus        24 kpy~C~~C~k~F~~~~~L~~H~~~Ht~   50 (88)
T 1x6f_A           24 STYQCKHCDSKLQSTAELTSHLNIHNE   50 (88)
T ss_dssp             SCEECSSSCCEESSHHHHHHHHHHHHH
T ss_pred             CCCcCCCCCCEeCCHHHHHHHHHHhCC
Confidence            689999999999999999999998765

>1fv5_A First zinc finger of U-shaped; CCHC, protein interaction, transcription; NMR {Drosophila melanogaster} SCOP: g.37.1.2 PDB: 1y0j_B 2l6z_B

Probab=94.20  E-value=0.022  Score=37.51  Aligned_cols=22  Identities=36%  Similarity=0.730  Sum_probs=21.0

Q ss_pred             CCccccccCCCCcccCCHHHHHHHH
Q 015261          232 RDFMCLYCNDRCHPFNSLEAVRKHM  256 (410)
Q Consensus       232 ~~~~Cl~C~~~gk~F~s~~alr~HM  256 (410)
                      .+|+|..|+   |+|.+...|+.||
T Consensus         7 kp~~C~~Cg---K~F~~~s~L~~H~   28 (36)
T 1fv5_A            7 ARFMCLPCG---IAFSSPSTLEAHQ   28 (36)
T ss_dssp             CCCEETTTT---EECSCHHHHHHHH
T ss_pred             cCeECCCCC---CccCCHhHccCcC
Confidence            389999999   9999999999999

>1ncs_A Peptide M30F, transcriptional factor SWI5; DNA binding motif, transcription regulation, zinc-finger; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=93.92  E-value=0.012  Score=40.03  Aligned_cols=27  Identities=15%  Similarity=0.191  Sum_probs=24.4

Q ss_pred             CCcccC--CCCCCCCChhHHhhhhhhhhc
Q 015261          181 DPACCF--MCDLPHDAIENCMVHMHKCHG  207 (410)
Q Consensus       181 ~p~~Cl--fC~~~f~~~~~~~~HM~~~Hg  207 (410)
                      .|+.|.  .|++.|.....|..||++|.|
T Consensus        17 k~~~C~~~~C~k~F~~~~~L~~H~~~H~~   45 (47)
T 1ncs_A           17 KTFECLFPGCTKTFKRRYNIRSHIQTHLE   45 (47)
T ss_dssp             TEEECCCTTCCCEECSSSSHHHHHHHHTT
T ss_pred             CCeECCCCCCCCccCCHHHHHHHHHHccC
Confidence            689996  599999999999999999766

>1ncs_A Peptide M30F, transcriptional factor SWI5; DNA binding motif, transcription regulation, zinc-finger; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=93.56  E-value=0.021  Score=38.84  Aligned_cols=28  Identities=18%  Similarity=0.472  Sum_probs=24.7

Q ss_pred             CCCCCccccc--CcCCccCChHHHHHHHhh
Q 015261           61 NATPMTYSCG--LCGKGYRSSKALAQHLNS   88 (410)
Q Consensus        61 ~~~~~~~~C~--~C~K~f~s~~~l~~Hl~s   88 (410)
                      +.++++|.|.  .|+|.|.....|..|++.
T Consensus        13 H~~~k~~~C~~~~C~k~F~~~~~L~~H~~~   42 (47)
T 1ncs_A           13 EMPDKTFECLFPGCTKTFKRRYNIRSHIQT   42 (47)
T ss_dssp             EETTTEEECCCTTCCCEECSSSSHHHHHHH
T ss_pred             cCCCCCeECCCCCCCCccCCHHHHHHHHHH
Confidence            4577899996  799999999999999975

>1x3c_A Zinc finger protein 292; DNA binding, nuclear protein, C2H2-type zinc finger, KIAA0530, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=93.13  E-value=0.057  Score=41.46  Aligned_cols=27  Identities=19%  Similarity=0.349  Sum_probs=24.1

Q ss_pred             CCCCCcccccC--cCCccCChHHHHHHHh
Q 015261           61 NATPMTYSCGL--CGKGYRSSKALAQHLN   87 (410)
Q Consensus        61 ~~~~~~~~C~~--C~K~f~s~~~l~~Hl~   87 (410)
                      ..++++|.|..  |+|.|.....|..|++
T Consensus        22 ~sGEKPYkC~~~~CgKaFsr~s~L~~H~r   50 (73)
T 1x3c_A           22 YSPYRPYRCVHQGCFAAFTIQQNLILHYQ   50 (73)
T ss_dssp             SCSSCSCBCCSTTCCCBCSSHHHHHHHHH
T ss_pred             ccCCCCeECCCCCcChhHcCHHHHHHHhh
Confidence            35889999976  9999999999999985

>1x6f_A Zinc finger protein 462; zinc finger domain, KIAA1803, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=92.34  E-value=0.07  Score=41.97  Aligned_cols=29  Identities=31%  Similarity=0.559  Sum_probs=25.8

Q ss_pred             CCCCCcccccCcCCccCChHHHHHHHhhh
Q 015261           61 NATPMTYSCGLCGKGYRSSKALAQHLNSR   89 (410)
Q Consensus        61 ~~~~~~~~C~~C~K~f~s~~~l~~Hl~sk   89 (410)
                      +.++++|.|.+|+|.|.....|..|++..
T Consensus        20 H~~~kpy~C~~C~k~F~~~~~L~~H~~~H   48 (88)
T 1x6f_A           20 RLQNSTYQCKHCDSKLQSTAELTSHLNIH   48 (88)
T ss_dssp             CCCCSCEECSSSCCEESSHHHHHHHHHHH
T ss_pred             cCCCCCCcCCCCCCEeCCHHHHHHHHHHh
Confidence            55778999999999999999999999763

>2e72_A POGO transposable element with ZNF domain; zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=92.27  E-value=0.059  Score=37.81  Aligned_cols=24  Identities=21%  Similarity=0.308  Sum_probs=22.1

Q ss_pred             CCcccccccccCChHHHhhhhhhc
Q 015261            3 GLTCNSCNREFNDDAEQKLHYKSD   26 (410)
Q Consensus         3 ~ftC~~C~~~F~~~~~qr~H~ksd   26 (410)
                      .|.|..|+++|.-.+.||.|||-+
T Consensus        12 ~~~CPrCn~~f~~~~sLr~Hmkyc   35 (49)
T 2e72_A           12 RKICPRCNAQFRVTEALRGHMCYC   35 (49)
T ss_dssp             CCCCTTTCCCCSSHHHHHHHHHHH
T ss_pred             ceeCCcccccccchHHHHhhhhhc
Confidence            589999999999999999999953

>1zr9_A Zinc finger protein 593; DNA binding, structural genomics, PSI, protein structure initiative, center for eukaryotic structural genomics, CESG; NMR {Homo sapiens} SCOP: g.37.1.4

Probab=92.09  E-value=0.039  Score=46.82  Aligned_cols=28  Identities=32%  Similarity=0.547  Sum_probs=25.6

Q ss_pred             CCCcccccccccCChHHHhhhhhhcccc
Q 015261            2 PGLTCNSCNREFNDDAEQKLHYKSDWHR   29 (410)
Q Consensus         2 ~~ftC~~C~~~F~~~~~qr~H~ksdwHr   29 (410)
                      .+|.|..|+..|.+...|..|+++--|+
T Consensus        49 kpfyC~~C~K~F~~~~~L~~H~rsK~HK   76 (124)
T 1zr9_A           49 GLHRCLACARYFIDSTNLKTHFRSKDHK   76 (124)
T ss_dssp             GCSEETTTTEECSSHHHHHHHTTCHHHH
T ss_pred             cceEcccCcchhCCHHHHHHHHhhhhhh
Confidence            4799999999999999999999997774

>3mjh_B Early endosome antigen 1; protein-zinc finger complex, beta BETA alpha fold, beta HAIR RAB5A GTPase, EEA1, protein transport; HET: GTP; 2.03A {Homo sapiens}

Probab=90.75  E-value=0.072  Score=34.90  Aligned_cols=25  Identities=24%  Similarity=0.569  Sum_probs=23.3

Q ss_pred             CCCcccccccccCChHHHhhhhhhc
Q 015261            2 PGLTCNSCNREFNDDAEQKLHYKSD   26 (410)
Q Consensus         2 ~~ftC~~C~~~F~~~~~qr~H~ksd   26 (410)
                      .+|.|..|.+.|.++..|..||...
T Consensus         4 EGFiCP~C~~~l~s~~~L~~Hye~~   28 (34)
T 3mjh_B            4 EGFICPQCMKSLGSADELFKHYEAV   28 (34)
T ss_dssp             EEEECTTTCCEESSHHHHHHHHHHH
T ss_pred             cccCCcHHHHHcCCHHHHHHHHHhc
Confidence            3699999999999999999999987

>2e72_A POGO transposable element with ZNF domain; zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=90.62  E-value=0.19  Score=35.32  Aligned_cols=23  Identities=39%  Similarity=0.628  Sum_probs=21.6

Q ss_pred             CCccccccCCCCcccCCHHHHHHHHH
Q 015261          232 RDFMCLYCNDRCHPFNSLEAVRKHME  257 (410)
Q Consensus       232 ~~~~Cl~C~~~gk~F~s~~alr~HM~  257 (410)
                      ..+.|.-||   +.|..+++|+.||+
T Consensus        11 ~~~~CPrCn---~~f~~~~sLr~Hmk   33 (49)
T 2e72_A           11 GRKICPRCN---AQFRVTEALRGHMC   33 (49)
T ss_dssp             SCCCCTTTC---CCCSSHHHHHHHHH
T ss_pred             CceeCCccc---ccccchHHHHhhhh
Confidence            468999999   99999999999998

>2yrk_A Zinc finger homeobox protein 4; structure genomics, ZF-C2H2 domain, ZFH-4, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: g.37.1.4

Probab=90.50  E-value=0.096  Score=37.70  Aligned_cols=31  Identities=29%  Similarity=0.657  Sum_probs=27.9

Q ss_pred             ccccCcCCccCChHHHHHHHhhhhhhhhhcc
Q 015261           67 YSCGLCGKGYRSSKALAQHLNSRSHIMRASQ   97 (410)
Q Consensus        67 ~~C~~C~K~f~s~~~l~~Hl~skkHk~~~~~   97 (410)
                      -.|.+|+.+|..+-+++.|+-++.|+.+++.
T Consensus        14 ~eC~lC~vkYs~r~slqDHIFs~qHI~~vk~   44 (55)
T 2yrk_A           14 PECTLCGVKYSARLSIRDHIFSKQHISKVRE   44 (55)
T ss_dssp             SCCTTTTCCCCSSSCHHHHHTSHHHHHHHHH
T ss_pred             ccccccCcccccccchhhhhccHHHHHHHHH
Confidence            3799999999999999999999999986553

>1zw8_A Zinc-responsive transcriptional regulator ZAP1; interacting C2H2 zinc fingers, beta-BETA-alpha, solution structure; NMR {Saccharomyces cerevisiae}

Probab=90.49  E-value=0.3  Score=36.12  Aligned_cols=58  Identities=17%  Similarity=0.304  Sum_probs=42.9

Q ss_pred             Ccc--cccccccCChHHHhhhhhhccccchhhhhhcCCCCCCHHHHHHHHHHHHHhhhcCCCCCccccc--CcCCccCCh
Q 015261            4 LTC--NSCNREFNDDAEQKLHYKSDWHRYNLKRKVAGVPGVTEALFLARQAALAQEKNKNATPMTYSCG--LCGKGYRSS   79 (410)
Q Consensus         4 ftC--~~C~~~F~~~~~qr~H~ksdwHrYNlKRrva~Lppvs~~~F~~k~~~l~~~~~~~~~~~~~~C~--~C~K~f~s~   79 (410)
                      |.|  ..|+..|.+.+.|..|+..+ |.        +-++                   ......|.|.  -|++.+...
T Consensus         2 l~C~W~~C~~~f~~~~~l~~Hv~~~-Hv--------~~~~-------------------~~~~~~~~C~W~~C~~~~~~~   53 (64)
T 1zw8_A            2 LKCKWKECPESASSLFDLQRHLLKD-HV--------SQDF-------------------KHPMEPLACNWEDCDFLGDDT   53 (64)
T ss_dssp             CCCCCTTCCCCCSSHHHHHHHHHHH-SC--------CCCC-------------------CCSSCCEECCCSSCCCEESSH
T ss_pred             CeEeeCCCCCcCCCHHHHHHHHHhh-cc--------Cccc-------------------CCCCCCCEeeCCCCcCCCCCh
Confidence            456  45999999999999999655 52        2111                   0012378996  999999999


Q ss_pred             HHHHHHHhhh
Q 015261           80 KALAQHLNSR   89 (410)
Q Consensus        80 ~~l~~Hl~sk   89 (410)
                      ..|.+|++.+
T Consensus        54 ~~L~~Hir~~   63 (64)
T 1zw8_A           54 ASIVNHINAQ   63 (64)
T ss_dssp             HHHHHHHHHH
T ss_pred             HHHHhhcccc
Confidence            9999999875

>1wir_A Protein arginine N-methyltransferase 3; C2H2 zinc finger domain, PRMT3, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: g.37.1.5

Probab=87.27  E-value=0.23  Score=41.88  Aligned_cols=32  Identities=28%  Similarity=0.546  Sum_probs=28.4

Q ss_pred             CCCcccccccccCChHHHhhhhhhccccchhhh
Q 015261            2 PGLTCNSCNREFNDDAEQKLHYKSDWHRYNLKR   34 (410)
Q Consensus         2 ~~ftC~~C~~~F~~~~~qr~H~ksdwHrYNlKR   34 (410)
                      .+.+|.+|..+|.+...+..|||.. |.+||..
T Consensus        14 ~~~~CLFCd~~~~s~~~~l~H~k~~-H~FD~~~   45 (121)
T 1wir_A           14 QHTPCLFCDRLFASAEETFSHCKLE-HQFNIDS   45 (121)
T ss_dssp             CCEECSSSCCEESSHHHHHHHHHHS-SCCCHHH
T ss_pred             CceeEecCCCcccCHHHHHHHHHHh-cCCCHHH
Confidence            3679999999999999999999998 7798753

>3mjh_B Early endosome antigen 1; protein-zinc finger complex, beta BETA alpha fold, beta HAIR RAB5A GTPase, EEA1, protein transport; HET: GTP; 2.03A {Homo sapiens}

Probab=87.19  E-value=0.31  Score=31.83  Aligned_cols=25  Identities=24%  Similarity=0.453  Sum_probs=22.4

Q ss_pred             cccccCcCCccCChHHHHHHHhhhh
Q 015261           66 TYSCGLCGKGYRSSKALAQHLNSRS   90 (410)
Q Consensus        66 ~~~C~~C~K~f~s~~~l~~Hl~skk   90 (410)
                      .|.|++|.|.|.+...|..|-.++.
T Consensus         5 GFiCP~C~~~l~s~~~L~~Hye~~H   29 (34)
T 3mjh_B            5 GFICPQCMKSLGSADELFKHYEAVH   29 (34)
T ss_dssp             EEECTTTCCEESSHHHHHHHHHHHT
T ss_pred             ccCCcHHHHHcCCHHHHHHHHHhcc
Confidence            5899999999999999999997654

>1fu9_A U-shaped transcriptional cofactor; zinc-finger, beta-hairpin + alpha-helix; NMR {Drosophila melanogaster} SCOP: g.37.1.2 PDB: 1jn7_A

Probab=86.78  E-value=0.29  Score=32.28  Aligned_cols=24  Identities=21%  Similarity=0.281  Sum_probs=21.4

Q ss_pred             CCCcccccccccCChHHHhhhhhh
Q 015261            2 PGLTCNSCNREFNDDAEQKLHYKS   25 (410)
Q Consensus         2 ~~ftC~~C~~~F~~~~~qr~H~ks   25 (410)
                      ..+.|..|++.|.+-+.++.|.+-
T Consensus         7 ~~~~C~~C~IsF~~l~ty~aHKk~   30 (36)
T 1fu9_A            7 MKKYCSTCDISFNYVKTYLAHKQF   30 (36)
T ss_dssp             CCSEETTTTEECSSHHHHHHHHHH
T ss_pred             CcCeeccccceehhhHHHhhhhee
Confidence            358899999999999999999873

>2elu_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2elw_A

Probab=84.06  E-value=0.37  Score=30.97  Aligned_cols=24  Identities=21%  Similarity=0.549  Sum_probs=22.7

Q ss_pred             ccCCCCCCCCChhHHhhhhhhhhc
Q 015261          184 CCFMCDLPHDAIENCMVHMHKCHG  207 (410)
Q Consensus       184 ~ClfC~~~f~~~~~~~~HM~~~Hg  207 (410)
                      .|-||.+.++++..|++|.+..|.
T Consensus        11 hcrfckkkysdvknlikhire~hd   34 (37)
T 2elu_A           11 HCRFCKKKYSDVKNLIKHIRDAHD   34 (37)
T ss_dssp             EETTTTEECSSHHHHHHHHHHTTC
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhcC
Confidence            699999999999999999999886

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	410
d2csha1	53	Zinc finger protein 297b {Human (Homo sapiens) [Ta	98.66
d2csha1	53	Zinc finger protein 297b {Human (Homo sapiens) [Ta	98.59
d1wira_	121	Protein arginine N-methyltransferase 3 {Mouse (Mus	97.98
d1zr9a1	67	Zinc finger protein 593, ZNF593 {Human (Homo sapie	97.66
d1a1ia2	28	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	97.64
d2adra1	29	ADR1 {Synthetic, based on Saccharomyces cerevisiae	97.64
d1srka_	35	Zinc finger protein ZFPM1 (FOG-1) {Mouse (Mus musc	97.62
d1sp1a_	29	Transcription factor sp1 {Human (Homo sapiens) [Ta	97.58
d2ct1a2	36	Transcriptional repressor CTCF {Human (Homo sapien	97.49
d1x6ea1	33	Zinc finger protein 24 {Human (Homo sapiens) [TaxI	97.47
d1x6ha2	36	Transcriptional repressor CTCF {Human (Homo sapien	97.46
d1p7aa_	37	Kruppel-like factor 3, Bklf {Mouse (Mus musculus)	97.45
d2epsa1	39	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	97.44
d2cota2	38	Zinc finger and SCAN domain-containing protein 16,	97.43
d2dmda2	26	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	97.42
d1a1ia2	28	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	97.36
d1x6ha2	36	Transcriptional repressor CTCF {Human (Homo sapien	97.24
d2cota2	38	Zinc finger and SCAN domain-containing protein 16,	97.22
d2ct1a2	36	Transcriptional repressor CTCF {Human (Homo sapien	97.2
d2glia3	30	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	97.19
d1bboa2	29	Enhancer binding protein {Human (Homo sapiens) [Ta	97.18
d1ubdc3	30	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	97.13
d1x6ea2	26	Zinc finger protein 24 {Human (Homo sapiens) [TaxI	97.11
d1x6ea2	26	Zinc finger protein 24 {Human (Homo sapiens) [TaxI	97.11
d1x6ea1	33	Zinc finger protein 24 {Human (Homo sapiens) [TaxI	97.1
d1srka_	35	Zinc finger protein ZFPM1 (FOG-1) {Mouse (Mus musc	97.03
d2epsa1	39	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	96.96
d1p7aa_	37	Kruppel-like factor 3, Bklf {Mouse (Mus musculus)	96.96
d1sp1a_	29	Transcription factor sp1 {Human (Homo sapiens) [Ta	96.95
d1bboa2	29	Enhancer binding protein {Human (Homo sapiens) [Ta	96.93
d1sp2a_	31	Transcription factor sp1 {Human (Homo sapiens) [Ta	96.9
d2dlka2	36	Zinc finger protein 692, ZNF692 {Human (Homo sapie	96.81
d1a1ia1	29	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	96.81
d2adra1	29	ADR1 {Synthetic, based on Saccharomyces cerevisiae	96.79
d1ubdc4	28	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	96.66
d1zfda_	32	SWI5 zinc-finger domains {Baker's yeast (Saccharom	96.63
d2glia3	30	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	96.43
d1a1ia3	28	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	96.35
d1zfda_	32	SWI5 zinc-finger domains {Baker's yeast (Saccharom	96.2
d2dmda2	26	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	96.15
d2dlka2	36	Zinc finger protein 692, ZNF692 {Human (Homo sapie	96.15
d1ubdc3	30	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	96.13
d1ubdc4	28	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	96.13
d1ncsa_	47	SWI5 zinc-finger domains {Baker's yeast (Saccharom	95.94
d1a1ia3	28	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	95.85
d1klra_	30	ZFY {Human (Homo sapiens) [TaxId: 9606]}	95.79
d1a1ia1	29	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	95.77
d1ncsa_	47	SWI5 zinc-finger domains {Baker's yeast (Saccharom	95.63
d1njqa_	37	SUPERMAN zinc finger domain {Thale cress (Arabidop	95.62
d1sp2a_	31	Transcription factor sp1 {Human (Homo sapiens) [Ta	95.52
d2dlqa3	30	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	95.38
d2dmda3	29	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	95.18
d1x5wa2	29	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	95.18
d2adra2	31	ADR1 {Synthetic, based on Saccharomyces cerevisiae	95.08
d2glia5	29	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	94.92
d2epqa1	32	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	94.45
d2glia5	29	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	93.82
d2dlqa1	26	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	93.59
d1klra_	30	ZFY {Human (Homo sapiens) [TaxId: 9606]}	93.1
d1znfa_	26	XFIN, third domain {Xenopus laevis [TaxId: 8355]}	92.46
d1zr9a1	67	Zinc finger protein 593, ZNF593 {Human (Homo sapie	92.21
d2epqa1	32	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	92.15
d2glia2	33	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	91.87
d1bboa1	28	Enhancer binding protein {Human (Homo sapiens) [Ta	91.86
d2csha2	44	Zinc finger protein 297b {Human (Homo sapiens) [Ta	91.62
d2dlqa1	26	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	91.41
d2dmda3	29	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	91.29
d1njqa_	37	SUPERMAN zinc finger domain {Thale cress (Arabidop	91.28
d2dmda1	28	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	90.92
d1ubdc2	28	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	90.75
d1wira_	121	Protein arginine N-methyltransferase 3 {Mouse (Mus	90.5
d2adra2	31	ADR1 {Synthetic, based on Saccharomyces cerevisiae	89.65
d2dlqa4	27	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	89.36
d2dlqa3	30	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	89.3
d2yrka1	48	Zinc finger homeobox protein 4, ZFHX4 {Human (Homo	89.25
d1y0jb1	36	U-shaped transcription factor, different fingers {	89.19
d1bboa1	28	Enhancer binding protein {Human (Homo sapiens) [Ta	87.68
d2eppa1	53	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	87.44
d2dlqa2	28	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	86.63
d2glia4	31	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	85.84
d1y0jb1	36	U-shaped transcription factor, different fingers {	85.83
d1znfa_	26	XFIN, third domain {Xenopus laevis [TaxId: 8355]}	85.24
d2csha2	44	Zinc finger protein 297b {Human (Homo sapiens) [Ta	84.88
d2eppa1	53	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	84.75
d2ctda2	30	Zinc finger protein 512, ZNF512 {Human (Homo sapie	84.59
d1x6ha1	37	Transcriptional repressor CTCF {Human (Homo sapien	84.38
d2ct1a1	28	Transcriptional repressor CTCF {Human (Homo sapien	84.37
d2glia4	31	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	83.98
d1bhia_	38	Transactivation domain of cre-bp1/atf-2 {Human (Ho	83.64
d1ubdc2	28	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	82.85
d1x5wa2	29	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	82.12
d2ct1a1	28	Transcriptional repressor CTCF {Human (Homo sapien	81.71
d2drpa1	37	Tramtrack protein (two zinc-finger peptide) {Droso	81.28
d2epra1	35	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	80.92
d2ctda2	30	Zinc finger protein 512, ZNF512 {Human (Homo sapie	80.44
d2dlqa2	28	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	80.06

>d2csha1 g.37.1.1 (A:8-60) Zinc finger protein 297b {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 297b
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.66  E-value=5.7e-09  Score=74.24  Aligned_cols=51  Identities=25%  Similarity=0.673  Sum_probs=46.1

Q ss_pred             CCCcccccccccCChHHHhhhhhhccccchhhhhhcCCCCCCHHHHHHHHHHHHHhhhcCCCCCcccccCcCCccCChHH
Q 015261            2 PGLTCNSCNREFNDDAEQKLHYKSDWHRYNLKRKVAGVPGVTEALFLARQAALAQEKNKNATPMTYSCGLCGKGYRSSKA   81 (410)
Q Consensus         2 ~~ftC~~C~~~F~~~~~qr~H~ksdwHrYNlKRrva~Lppvs~~~F~~k~~~l~~~~~~~~~~~~~~C~~C~K~f~s~~~   81 (410)
                      -+|+|. ||..|.....|+.|+++  |                                 +++++|.|.+|+|.|.....
T Consensus         2 K~y~C~-Cgk~F~~~~~l~~H~~~--H---------------------------------t~ekpy~C~~C~k~F~~~~~   45 (53)
T d2csha1           2 KLYPCQ-CGKSFTHKSQRDRHMSM--H---------------------------------LGLRPYGCGVCGKKFKMKHH   45 (53)
T ss_dssp             CCEECT-TSCEESSHHHHHHHHHH--H---------------------------------SCCCSEECTTTSCEESSSHH
T ss_pred             cCCCCC-CCCeECCHHHhHHHhhc--c---------------------------------ccccCCcCCCcCCEecCHHH
Confidence            379995 99999999999999998  5                                 36789999999999999999


Q ss_pred             HHHHHhh
Q 015261           82 LAQHLNS   88 (410)
Q Consensus        82 l~~Hl~s   88 (410)
                      |..||+.
T Consensus        46 L~~H~r~   52 (53)
T d2csha1          46 LVGHMKI   52 (53)
T ss_dssp             HHHHHTT
T ss_pred             HHHHHhc
Confidence            9999974

>d2csha1 g.37.1.1 (A:8-60) Zinc finger protein 297b {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 297b
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.59  E-value=8e-09  Score=73.45  Aligned_cols=51  Identities=22%  Similarity=0.323  Sum_probs=46.3

Q ss_pred             CCcccCCCCCCCCChhHHhhhhhhhhcCCCCCcccccChHHHHHHHHhHhcCCccccccCCCCcccCCHHHHHHHHHh
Q 015261          181 DPACCFMCDLPHDAIENCMVHMHKCHGFFIPDVEYLKDPKGLLTYLGLKVKRDFMCLYCNDRCHPFNSLEAVRKHMEA  258 (410)
Q Consensus       181 ~p~~ClfC~~~f~~~~~~~~HM~~~Hgf~ip~~~~lvd~~gLl~yl~~ki~~~~~Cl~C~~~gk~F~s~~alr~HM~~  258 (410)
                      .|+.|. ||+.|.....|..||++|.|                       ..+|.|..|+   +.|.....|..||+.
T Consensus         2 K~y~C~-Cgk~F~~~~~l~~H~~~Ht~-----------------------ekpy~C~~C~---k~F~~~~~L~~H~r~   52 (53)
T d2csha1           2 KLYPCQ-CGKSFTHKSQRDRHMSMHLG-----------------------LRPYGCGVCG---KKFKMKHHLVGHMKI   52 (53)
T ss_dssp             CCEECT-TSCEESSHHHHHHHHHHHSC-----------------------CCSEECTTTS---CEESSSHHHHHHHTT
T ss_pred             cCCCCC-CCCeECCHHHhHHHhhcccc-----------------------ccCCcCCCcC---CEecCHHHHHHHHhc
Confidence            589995 99999999999999998766                       3589999999   999999999999975

>d1wira_ g.37.1.5 (A:) Protein arginine N-methyltransferase 3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: variant C2H2 finger
domain: Protein arginine N-methyltransferase 3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.98  E-value=8.1e-07  Score=73.46  Aligned_cols=50  Identities=22%  Similarity=0.371  Sum_probs=43.8

Q ss_pred             CCcccCCCCCCCCChhHHhhhhhhhhcCCCCCc--cc---ccChHHHHHHHHhHh
Q 015261          181 DPACCFMCDLPHDAIENCMVHMHKCHGFFIPDV--EY---LKDPKGLLTYLGLKV  230 (410)
Q Consensus       181 ~p~~ClfC~~~f~~~~~~~~HM~~~Hgf~ip~~--~~---lvd~~gLl~yl~~ki  230 (410)
                      .++.||||.+.|.+...++.||+..|+|.+...  ++   +++...||+|++.++
T Consensus        14 ~~~~CLFCd~~f~s~~~~l~H~k~~H~FD~~~~~~~~~LDfY~~IKLINYIR~~~   68 (121)
T d1wira_          14 QHTPCLFCDRLFASAEETFSHCKLEHQFNIDSMVHKHGLEFYGYIKLINFIRLKN   68 (121)
T ss_dssp             CCEECSSSCCEESSHHHHHHHHHHSSCCCHHHHHHHTTCCHHHHHHHHHHHHHTC
T ss_pred             ccceecccCCccCCHHHHHHHHHHhhCCCHHHHHHHcCCCccceEEEEeeeeccc
Confidence            578899999999999999999999999999875  22   478899999998764

>d1zr9a1 g.37.1.4 (A:28-94) Zinc finger protein 593, ZNF593 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: HkH motif-containing C2H2 finger
domain: Zinc finger protein 593, ZNF593
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.66  E-value=4.9e-06  Score=61.51  Aligned_cols=33  Identities=24%  Similarity=0.369  Sum_probs=29.7

Q ss_pred             CCcccccCcCCccCChHHHHHHHhhhhhhhhhc
Q 015261           64 PMTYSCGLCGKGYRSSKALAQHLNSRSHIMRAS   96 (410)
Q Consensus        64 ~~~~~C~~C~K~f~s~~~l~~Hl~skkHk~~~~   96 (410)
                      .-.|+|.+|.|.|.+.++|.+|++||+|+.+.+
T Consensus        13 ~gqfYCv~C~K~F~se~~l~~H~ksKkHKrrvk   45 (67)
T d1zr9a1          13 GGLHRCLACARYFIDSTNLKTHFRSKDHKKRLK   45 (67)
T ss_dssp             GGCSEETTTTEECSSHHHHHHHTTCHHHHHHHH
T ss_pred             CCEEecccccCccCCHHHHHHHHcccHHHHHHH
Confidence            346899999999999999999999999998654

>d1a1ia2 g.37.1.1 (A:132-159) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.64  E-value=7.5e-06  Score=50.23  Aligned_cols=27  Identities=19%  Similarity=0.416  Sum_probs=25.3

Q ss_pred             CCcccCCCCCCCCChhHHhhhhhhhhc
Q 015261          181 DPACCFMCDLPHDAIENCMVHMHKCHG  207 (410)
Q Consensus       181 ~p~~ClfC~~~f~~~~~~~~HM~~~Hg  207 (410)
                      .|+.|..|++.|...+.|..||++|.|
T Consensus         2 KPy~C~~C~k~F~~~~~L~~H~r~HTG   28 (28)
T d1a1ia2           2 KPFQCRICMRNFSRSDHLTTHIRTHTG   28 (28)
T ss_dssp             CCEECTTTCCEESCHHHHHHHHHHHHC
T ss_pred             cCccCCCCcCEecccccccccCCCccC
Confidence            589999999999999999999999865

>d2adra1 g.37.1.1 (A:102-130) ADR1 {Synthetic, based on Saccharomyces cerevisiae sequence}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ADR1
species: Synthetic, based on Saccharomyces cerevisiae sequence

Probab=97.64  E-value=1.2e-05  Score=49.69  Aligned_cols=27  Identities=15%  Similarity=0.235  Sum_probs=25.1

Q ss_pred             CCcccCCCCCCCCChhHHhhhhhhhhc
Q 015261          181 DPACCFMCDLPHDAIENCMVHMHKCHG  207 (410)
Q Consensus       181 ~p~~ClfC~~~f~~~~~~~~HM~~~Hg  207 (410)
                      .|+.|.+|++.|...+.|..||++|.|
T Consensus         1 kp~~C~~C~k~F~~~~~L~~H~r~HTg   27 (29)
T d2adra1           1 RSFVCEVCTRAFARQEHLKRHYRSHTN   27 (29)
T ss_dssp             CCBCCTTTCCCBSCHHHHHHHHHTTTS
T ss_pred             CcCCCCCCCCCCCCchHcccccCcccC
Confidence            389999999999999999999999876

>d1srka_ g.37.1.1 (A:) Zinc finger protein ZFPM1 (FOG-1) {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein ZFPM1 (FOG-1)
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.62  E-value=1.4e-05  Score=51.49  Aligned_cols=28  Identities=18%  Similarity=0.498  Sum_probs=25.9

Q ss_pred             CCCCCcccccCcCCccCChHHHHHHHhh
Q 015261           61 NATPMTYSCGLCGKGYRSSKALAQHLNS   88 (410)
Q Consensus        61 ~~~~~~~~C~~C~K~f~s~~~l~~Hl~s   88 (410)
                      ++++++|.|.+|+|.|.....|..|++.
T Consensus         2 ~TGekPy~C~~C~k~F~~~~~L~~H~r~   29 (35)
T d1srka_           2 SSGKRPFVCRICLSAFTTKANCARHLKV   29 (35)
T ss_dssp             CSCCSCEECSSSCCEESSHHHHHHHHGG
T ss_pred             CCCCccccCCCCCCcccChHHHHHHccc
Confidence            4689999999999999999999999975

>d1sp1a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor sp1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.58  E-value=2.1e-05  Score=48.61  Aligned_cols=27  Identities=11%  Similarity=0.186  Sum_probs=25.1

Q ss_pred             CCcccCCCCCCCCChhHHhhhhhhhhc
Q 015261          181 DPACCFMCDLPHDAIENCMVHMHKCHG  207 (410)
Q Consensus       181 ~p~~ClfC~~~f~~~~~~~~HM~~~Hg  207 (410)
                      .|+.|.+|++.|...+.|..||++|.|
T Consensus         1 Kpy~C~~C~k~F~~~s~L~~H~r~Htg   27 (29)
T d1sp1a_           1 KKFACPECPKRFMRSDHLSKHIKTHQN   27 (29)
T ss_dssp             CCSCCTTTTCCCSCSHHHHHHHHGGGC
T ss_pred             CCEECCcCCCeecchHHhhhhcCccCC
Confidence            379999999999999999999999866

>d2ct1a2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.49  E-value=2.5e-05  Score=50.69  Aligned_cols=29  Identities=17%  Similarity=0.498  Sum_probs=26.8

Q ss_pred             CCCCCcccccCcCCccCChHHHHHHHhhh
Q 015261           61 NATPMTYSCGLCGKGYRSSKALAQHLNSR   89 (410)
Q Consensus        61 ~~~~~~~~C~~C~K~f~s~~~l~~Hl~sk   89 (410)
                      ++++++|.|.+|+|.|.....|+.|++..
T Consensus         3 HTgekP~~C~~C~k~F~~~~~L~~H~~~~   31 (36)
T d2ct1a2           3 HSGEKPYECYICHARFTQSGTMKMHILQK   31 (36)
T ss_dssp             CSCCCSEECTTTCCEESCHHHHHHHHHHH
T ss_pred             cCCCCCEeCCCCcccccchHHHHHHcccc
Confidence            67899999999999999999999998764

>d1x6ea1 g.37.1.1 (A:8-40) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.47  E-value=2.9e-05  Score=49.36  Aligned_cols=29  Identities=31%  Similarity=0.599  Sum_probs=26.5

Q ss_pred             CCCCCcccccCcCCccCChHHHHHHHhhh
Q 015261           61 NATPMTYSCGLCGKGYRSSKALAQHLNSR   89 (410)
Q Consensus        61 ~~~~~~~~C~~C~K~f~s~~~l~~Hl~sk   89 (410)
                      ++++++|.|..|+|.|.....|..|++..
T Consensus         2 HTgekpy~C~~Cgk~F~~~~~L~~H~r~H   30 (33)
T d1x6ea1           2 HSGEKPYGCVECGKAFSRSSILVQHQRVH   30 (33)
T ss_dssp             TTTCCCEECSSSCCEESSHHHHHHHHHGG
T ss_pred             cCCCCCeeCCCCCCEeCchHHhHhhcccc
Confidence            56889999999999999999999999863

>d1x6ha2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.46  E-value=2.9e-05  Score=50.33  Aligned_cols=29  Identities=24%  Similarity=0.591  Sum_probs=26.7

Q ss_pred             CCCCCcccccCcCCccCChHHHHHHHhhh
Q 015261           61 NATPMTYSCGLCGKGYRSSKALAQHLNSR   89 (410)
Q Consensus        61 ~~~~~~~~C~~C~K~f~s~~~l~~Hl~sk   89 (410)
                      ++++++|.|.+|+|.|.....|..|++..
T Consensus         3 HTgekPy~C~~C~k~F~~~~~L~~H~r~H   31 (36)
T d1x6ha2           3 HTGEKPYACSHCDKTFRQKQLLDMHFKRY   31 (36)
T ss_dssp             CCCCCCEECSSSSCEESSHHHHHHHHHHT
T ss_pred             CCCCCCEECCCCCCCcCCHhHHHHhCccc
Confidence            67899999999999999999999999764

>d1p7aa_ g.37.1.1 (A:) Kruppel-like factor 3, Bklf {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Kruppel-like factor 3, Bklf
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.45  E-value=3.8e-05  Score=50.04  Aligned_cols=28  Identities=21%  Similarity=0.456  Sum_probs=26.1

Q ss_pred             CCCCCcccccCcCCccCChHHHHHHHhh
Q 015261           61 NATPMTYSCGLCGKGYRSSKALAQHLNS   88 (410)
Q Consensus        61 ~~~~~~~~C~~C~K~f~s~~~l~~Hl~s   88 (410)
                      ++++++|.|..|+|+|.....|..|++.
T Consensus         6 HTgeKPy~C~~C~k~F~~~~~L~~H~r~   33 (37)
T d1p7aa_           6 STGIKPFQCPDCDRSFSRSDHLALHRKR   33 (37)
T ss_dssp             TCCSSSBCCTTTCCCBSSHHHHHHHHGG
T ss_pred             cCCccCeEeCCCCCEecCHHHHHHHHhc
Confidence            6789999999999999999999999864

>d2epsa1 g.37.1.1 (A:408-446) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.44  E-value=2.8e-05  Score=51.34  Aligned_cols=24  Identities=25%  Similarity=0.499  Sum_probs=22.3

Q ss_pred             CCCcccccccccCChHHHhhhhhh
Q 015261            2 PGLTCNSCNREFNDDAEQKLHYKS   25 (410)
Q Consensus         2 ~~ftC~~C~~~F~~~~~qr~H~ks   25 (410)
                      -||.|..|+..|.....|+.||+.
T Consensus         4 Kpy~C~~Cgk~F~~~~~L~~H~r~   27 (39)
T d2epsa1           4 KPYICQSCGKGFSRPDHLNGHIKQ   27 (39)
T ss_dssp             CCEECSSSCCEESSHHHHHHHHHH
T ss_pred             CCccCCCCCCCcCChHHhhccCcC
Confidence            489999999999999999999985

>d2cota2 g.37.1.1 (A:7-44) Zinc finger and SCAN domain-containing protein 16, ZSCAN16 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger and SCAN domain-containing protein 16, ZSCAN16
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.43  E-value=2e-05  Score=51.72  Aligned_cols=32  Identities=25%  Similarity=0.565  Sum_probs=28.0

Q ss_pred             hhcCCCCCcccccCcCCccCChHHHHHHHhhh
Q 015261           58 KNKNATPMTYSCGLCGKGYRSSKALAQHLNSR   89 (410)
Q Consensus        58 ~~~~~~~~~~~C~~C~K~f~s~~~l~~Hl~sk   89 (410)
                      +..++++++|.|..|+|.|.....|..|++..
T Consensus         4 ~~~Ht~ekpy~C~~CgK~F~~~s~L~~H~r~H   35 (38)
T d2cota2           4 EWQQRERRRYKCDECGKSFSHSSDLSKHRRTH   35 (38)
T ss_dssp             CSCCCCSCSSBCSSSCCBCSCHHHHHHHHTTT
T ss_pred             CcccCCCCCEecCCCCceeeCHHHHHHhCccC
Confidence            34467899999999999999999999999853

>d2dmda2 g.37.1.1 (A:8-33) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.42  E-value=4e-05  Score=44.40  Aligned_cols=26  Identities=23%  Similarity=0.398  Sum_probs=23.7

Q ss_pred             CcccCCCCCCCCChhHHhhhhhhhhc
Q 015261          182 PACCFMCDLPHDAIENCMVHMHKCHG  207 (410)
Q Consensus       182 p~~ClfC~~~f~~~~~~~~HM~~~Hg  207 (410)
                      |.+|.+|++.|+....|..||+.|.|
T Consensus         1 phkc~~c~kcfsrkdklk~hmr~htg   26 (26)
T d2dmda2           1 PHKCEVCGKCFSRKDKLKTHMRCHTG   26 (26)
T ss_dssp             CCCBTTTTBCCCCHHHHHHHGGGCCC
T ss_pred             CCccchhhhHhcchhHHHHHhhccCC
Confidence            56899999999999999999998754

>d1a1ia2 g.37.1.1 (A:132-159) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.36  E-value=3.8e-05  Score=46.96  Aligned_cols=26  Identities=19%  Similarity=0.649  Sum_probs=23.8

Q ss_pred             CCcccccCcCCccCChHHHHHHHhhh
Q 015261           64 PMTYSCGLCGKGYRSSKALAQHLNSR   89 (410)
Q Consensus        64 ~~~~~C~~C~K~f~s~~~l~~Hl~sk   89 (410)
                      +++|.|.+|+|.|.....|..|++..
T Consensus         1 EKPy~C~~C~k~F~~~~~L~~H~r~H   26 (28)
T d1a1ia2           1 QKPFQCRICMRNFSRSDHLTTHIRTH   26 (28)
T ss_dssp             CCCEECTTTCCEESCHHHHHHHHHHH
T ss_pred             CcCccCCCCcCEecccccccccCCCc
Confidence            47899999999999999999999864

>d1x6ha2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.24  E-value=4.4e-05  Score=49.45  Aligned_cols=27  Identities=22%  Similarity=0.465  Sum_probs=26.0

Q ss_pred             CCcccCCCCCCCCChhHHhhhhhhhhc
Q 015261          181 DPACCFMCDLPHDAIENCMVHMHKCHG  207 (410)
Q Consensus       181 ~p~~ClfC~~~f~~~~~~~~HM~~~Hg  207 (410)
                      .|+.|.+||+.|.....|..||++||+
T Consensus         7 kPy~C~~C~k~F~~~~~L~~H~r~H~~   33 (36)
T d1x6ha2           7 KPYACSHCDKTFRQKQLLDMHFKRYHD   33 (36)
T ss_dssp             CCEECSSSSCEESSHHHHHHHHHHTTC
T ss_pred             CCEECCCCCCCcCCHhHHHHhCcccCC
Confidence            799999999999999999999999986

>d2cota2 g.37.1.1 (A:7-44) Zinc finger and SCAN domain-containing protein 16, ZSCAN16 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger and SCAN domain-containing protein 16, ZSCAN16
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.22  E-value=7.9e-05  Score=48.74  Aligned_cols=28  Identities=14%  Similarity=0.134  Sum_probs=26.0

Q ss_pred             CCCcccCCCCCCCCChhHHhhhhhhhhc
Q 015261          180 FDPACCFMCDLPHDAIENCMVHMHKCHG  207 (410)
Q Consensus       180 i~p~~ClfC~~~f~~~~~~~~HM~~~Hg  207 (410)
                      ..|+.|..||+.|...+.|..||++|.|
T Consensus        10 ekpy~C~~CgK~F~~~s~L~~H~r~HtG   37 (38)
T d2cota2          10 RRRYKCDECGKSFSHSSDLSKHRRTHTG   37 (38)
T ss_dssp             SCSSBCSSSCCBCSCHHHHHHHHTTTCC
T ss_pred             CCCEecCCCCceeeCHHHHHHhCccCCC
Confidence            3799999999999999999999999876

>d2ct1a2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.20  E-value=6.1e-05  Score=48.75  Aligned_cols=28  Identities=18%  Similarity=0.418  Sum_probs=26.4

Q ss_pred             CCcccCCCCCCCCChhHHhhhhhhhhcC
Q 015261          181 DPACCFMCDLPHDAIENCMVHMHKCHGF  208 (410)
Q Consensus       181 ~p~~ClfC~~~f~~~~~~~~HM~~~Hgf  208 (410)
                      .|+.|.+|++.|.....|..||..+|+-
T Consensus         7 kP~~C~~C~k~F~~~~~L~~H~~~~H~~   34 (36)
T d2ct1a2           7 KPYECYICHARFTQSGTMKMHILQKHTE   34 (36)
T ss_dssp             CSEECTTTCCEESCHHHHHHHHHHHSSS
T ss_pred             CCEeCCCCcccccchHHHHHHcccccCC
Confidence            7999999999999999999999998974

>d2glia3 g.37.1.1 (A:168-197) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.19  E-value=0.00011  Score=45.62  Aligned_cols=27  Identities=26%  Similarity=0.549  Sum_probs=24.9

Q ss_pred             CCcccCC--CCCCCCChhHHhhhhhhhhc
Q 015261          181 DPACCFM--CDLPHDAIENCMVHMHKCHG  207 (410)
Q Consensus       181 ~p~~Clf--C~~~f~~~~~~~~HM~~~Hg  207 (410)
                      .|+.|.+  |++.|...+.|..||++|.|
T Consensus         1 kp~~C~~~gCgk~F~~~~~L~~H~r~HtG   29 (30)
T d2glia3           1 KPHKCTFEGCRKSYSRLENLKTHLRSHTG   29 (30)
T ss_dssp             CCCCCCSTTCCCCCSSHHHHHHHHHHTTT
T ss_pred             CCeeCCCCCCCceECChhHhhhhcCcCcC
Confidence            3799999  99999999999999999766

>d1bboa2 g.37.1.1 (A:29-57) Enhancer binding protein {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Enhancer binding protein
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.18  E-value=6.2e-05  Score=44.87  Aligned_cols=28  Identities=25%  Similarity=0.710  Sum_probs=25.8

Q ss_pred             cccccCcCCccCChHHHHHHHhhhhhhh
Q 015261           66 TYSCGLCGKGYRSSKALAQHLNSRSHIM   93 (410)
Q Consensus        66 ~~~C~~C~K~f~s~~~l~~Hl~skkHk~   93 (410)
                      +|.|..|+..|+++..|..||+||.|..
T Consensus         1 py~C~~CnF~FKTKGNLTKHmkSKaH~k   28 (29)
T d1bboa2           1 PYHCTYCNFSFKTKGNLTKHMKSKAHSK   28 (29)
T ss_dssp             CEECSSSSCEESSHHHHHHHHHSSSSCC
T ss_pred             CcccceeeeeEeeccchhHhhhhhhhcc
Confidence            5889999999999999999999999854

>d1ubdc3 g.37.1.1 (C:351-380) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.13  E-value=7.3e-05  Score=46.42  Aligned_cols=27  Identities=22%  Similarity=0.324  Sum_probs=24.7

Q ss_pred             CCcccCC--CCCCCCChhHHhhhhhhhhc
Q 015261          181 DPACCFM--CDLPHDAIENCMVHMHKCHG  207 (410)
Q Consensus       181 ~p~~Clf--C~~~f~~~~~~~~HM~~~Hg  207 (410)
                      .|+.|.+  |++.|...+.|..||++|.|
T Consensus         1 kp~~C~~~gCgk~F~~~~~L~~H~r~HTG   29 (30)
T d1ubdc3           1 KPFQCTFEGCGKRFSLDFNLRTHVRIHTG   29 (30)
T ss_dssp             CCEECCSTTCCCEESCHHHHHHHHHHHHC
T ss_pred             CCccCCCCCCCceECcHHHcCccccccCC
Confidence            3789988  99999999999999999766

>d1x6ea2 g.37.1.1 (A:41-66) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.11  E-value=0.00011  Score=44.08  Aligned_cols=24  Identities=29%  Similarity=0.641  Sum_probs=22.3

Q ss_pred             CcccccCcCCccCChHHHHHHHhh
Q 015261           65 MTYSCGLCGKGYRSSKALAQHLNS   88 (410)
Q Consensus        65 ~~~~C~~C~K~f~s~~~l~~Hl~s   88 (410)
                      ++|.|..|||.|.....|..|++.
T Consensus         1 KPy~C~eCgK~F~~~s~L~~Hqri   24 (26)
T d1x6ea2           1 KPYKCLECGKAFSQNSGLINHQRI   24 (26)
T ss_dssp             CCEECSSSCCEESSHHHHHHHHHH
T ss_pred             CCccCCCCcCeeccCcccccCccC
Confidence            479999999999999999999985

>d1x6ea2 g.37.1.1 (A:41-66) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.11  E-value=7.4e-05  Score=44.78  Aligned_cols=25  Identities=16%  Similarity=0.313  Sum_probs=23.5

Q ss_pred             CCcccCCCCCCCCChhHHhhhhhhh
Q 015261          181 DPACCFMCDLPHDAIENCMVHMHKC  205 (410)
Q Consensus       181 ~p~~ClfC~~~f~~~~~~~~HM~~~  205 (410)
                      .|++|..||+.|...+.|+.|+++|
T Consensus         1 KPy~C~eCgK~F~~~s~L~~HqriH   25 (26)
T d1x6ea2           1 KPYKCLECGKAFSQNSGLINHQRIH   25 (26)
T ss_dssp             CCEECSSSCCEESSHHHHHHHHHHH
T ss_pred             CCccCCCCcCeeccCcccccCccCC
Confidence            4899999999999999999999986

>d1x6ea1 g.37.1.1 (A:8-40) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.10  E-value=8.5e-05  Score=47.13  Aligned_cols=27  Identities=19%  Similarity=0.325  Sum_probs=25.5

Q ss_pred             CCcccCCCCCCCCChhHHhhhhhhhhc
Q 015261          181 DPACCFMCDLPHDAIENCMVHMHKCHG  207 (410)
Q Consensus       181 ~p~~ClfC~~~f~~~~~~~~HM~~~Hg  207 (410)
                      .|+.|..||+.|...+.|..||++|.|
T Consensus         6 kpy~C~~Cgk~F~~~~~L~~H~r~Htg   32 (33)
T d1x6ea1           6 KPYGCVECGKAFSRSSILVQHQRVHTG   32 (33)
T ss_dssp             CCEECSSSCCEESSHHHHHHHHHGGGC
T ss_pred             CCeeCCCCCCEeCchHHhHhhccccCC
Confidence            799999999999999999999999765

>d1srka_ g.37.1.1 (A:) Zinc finger protein ZFPM1 (FOG-1) {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein ZFPM1 (FOG-1)
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.03  E-value=9.9e-05  Score=47.44  Aligned_cols=26  Identities=23%  Similarity=0.496  Sum_probs=24.3

Q ss_pred             CCcccCCCCCCCCChhHHhhhhhhhh
Q 015261          181 DPACCFMCDLPHDAIENCMVHMHKCH  206 (410)
Q Consensus       181 ~p~~ClfC~~~f~~~~~~~~HM~~~H  206 (410)
                      .|+.|.+|++.|.....|..||++|-
T Consensus         6 kPy~C~~C~k~F~~~~~L~~H~r~Ht   31 (35)
T d1srka_           6 RPFVCRICLSAFTTKANCARHLKVHT   31 (35)
T ss_dssp             SCEECSSSCCEESSHHHHHHHHGGGT
T ss_pred             ccccCCCCCCcccChHHHHHHccccC
Confidence            79999999999999999999999853

>d2epsa1 g.37.1.1 (A:408-446) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.96  E-value=0.00016  Score=47.57  Aligned_cols=27  Identities=19%  Similarity=0.369  Sum_probs=24.7

Q ss_pred             CCcccCCCCCCCCChhHHhhhhhhhhc
Q 015261          181 DPACCFMCDLPHDAIENCMVHMHKCHG  207 (410)
Q Consensus       181 ~p~~ClfC~~~f~~~~~~~~HM~~~Hg  207 (410)
                      .|+.|.+||+.|.....|..||+..|.
T Consensus         4 Kpy~C~~Cgk~F~~~~~L~~H~r~~Ht   30 (39)
T d2epsa1           4 KPYICQSCGKGFSRPDHLNGHIKQVHT   30 (39)
T ss_dssp             CCEECSSSCCEESSHHHHHHHHHHTSC
T ss_pred             CCccCCCCCCCcCChHHhhccCcCccC
Confidence            689999999999999999999986565

>d1p7aa_ g.37.1.1 (A:) Kruppel-like factor 3, Bklf {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Kruppel-like factor 3, Bklf
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=96.96  E-value=0.00021  Score=46.35  Aligned_cols=24  Identities=21%  Similarity=0.564  Sum_probs=22.4

Q ss_pred             CCccccccCCCCcccCCHHHHHHHHHh
Q 015261          232 RDFMCLYCNDRCHPFNSLEAVRKHMEA  258 (410)
Q Consensus       232 ~~~~Cl~C~~~gk~F~s~~alr~HM~~  258 (410)
                      .||+|..|+   ++|.....|+.||+.
T Consensus        10 KPy~C~~C~---k~F~~~~~L~~H~r~   33 (37)
T d1p7aa_          10 KPFQCPDCD---RSFSRSDHLALHRKR   33 (37)
T ss_dssp             SSBCCTTTC---CCBSSHHHHHHHHGG
T ss_pred             cCeEeCCCC---CEecCHHHHHHHHhc
Confidence            499999999   999999999999975

>d1sp1a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor sp1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.95  E-value=0.00016  Score=44.48  Aligned_cols=23  Identities=22%  Similarity=0.544  Sum_probs=22.5

Q ss_pred             CCcccccccccCChHHHhhhhhh
Q 015261            3 GLTCNSCNREFNDDAEQKLHYKS   25 (410)
Q Consensus         3 ~ftC~~C~~~F~~~~~qr~H~ks   25 (410)
                      ||.|..|+..|..++.|..|+++
T Consensus         2 py~C~~C~k~F~~~s~L~~H~r~   24 (29)
T d1sp1a_           2 KFACPECPKRFMRSDHLSKHIKT   24 (29)
T ss_dssp             CSCCTTTTCCCSCSHHHHHHHHG
T ss_pred             CEECCcCCCeecchHHhhhhcCc
Confidence            79999999999999999999999

>d1bboa2 g.37.1.1 (A:29-57) Enhancer binding protein {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Enhancer binding protein
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.93  E-value=0.00022  Score=42.43  Aligned_cols=28  Identities=39%  Similarity=0.858  Sum_probs=25.8

Q ss_pred             CccccccCCCCcccCCHHHHHHHHHhcCCcc
Q 015261          233 DFMCLYCNDRCHPFNSLEAVRKHMEAKRHCK  263 (410)
Q Consensus       233 ~~~Cl~C~~~gk~F~s~~alr~HM~~k~HCk  263 (410)
                      ||.|.+|+   -.|.+...|..||.+|.|.|
T Consensus         1 py~C~~Cn---F~FKTKGNLTKHmkSKaH~k   28 (29)
T d1bboa2           1 PYHCTYCN---FSFKTKGNLTKHMKSKAHSK   28 (29)
T ss_dssp             CEECSSSS---CEESSHHHHHHHHHSSSSCC
T ss_pred             Ccccceee---eeEeeccchhHhhhhhhhcc
Confidence            57899999   68999999999999999976

>d1sp2a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor sp1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.90  E-value=0.00026  Score=44.16  Aligned_cols=27  Identities=19%  Similarity=0.346  Sum_probs=24.0

Q ss_pred             CCcccCC--CCCCCCChhHHhhhhhhhhc
Q 015261          181 DPACCFM--CDLPHDAIENCMVHMHKCHG  207 (410)
Q Consensus       181 ~p~~Clf--C~~~f~~~~~~~~HM~~~Hg  207 (410)
                      .|+.|.+  |++.|...+.|..||++|.|
T Consensus         1 kpf~C~~~~C~k~F~~~~~L~~H~r~Htg   29 (31)
T d1sp2a_           1 RPFMCTWSYCGKRFTRSDELQRHKRTHTG   29 (31)
T ss_dssp             CCCBCCSTTCCCBCSSHHHHHHHHTTTSC
T ss_pred             CcCCCcCCCCCcCcCChhHhhhhcCcccc
Confidence            3789965  99999999999999999765

>d2dlka2 g.37.1.1 (A:38-73) Zinc finger protein 692, ZNF692 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 692, ZNF692
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.81  E-value=0.00024  Score=45.86  Aligned_cols=25  Identities=16%  Similarity=0.216  Sum_probs=22.8

Q ss_pred             cccCC--CCCCCCChhHHhhhhhhhhc
Q 015261          183 ACCFM--CDLPHDAIENCMVHMHKCHG  207 (410)
Q Consensus       183 ~~Clf--C~~~f~~~~~~~~HM~~~Hg  207 (410)
                      +.|.+  |++.|...+.|..||++|.|
T Consensus         2 f~C~~~~C~k~F~~~~~L~~H~r~Htg   28 (36)
T d2dlka2           2 FSCPEPACGKSFNFKKHLKEHMKLHSD   28 (36)
T ss_dssp             EECSCTTTCCEESSHHHHHHHHHHHHT
T ss_pred             eECCCCCCCCeeCChhHhccccCeeCC
Confidence            57888  99999999999999999766

>d1a1ia1 g.37.1.1 (A:103-131) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=96.81  E-value=0.0002  Score=44.04  Aligned_cols=27  Identities=22%  Similarity=0.447  Sum_probs=24.5

Q ss_pred             CCcccCC--CCCCCCChhHHhhhhhhhhc
Q 015261          181 DPACCFM--CDLPHDAIENCMVHMHKCHG  207 (410)
Q Consensus       181 ~p~~Clf--C~~~f~~~~~~~~HM~~~Hg  207 (410)
                      .|+.|.+  |++.|...+.|..|+++|.|
T Consensus         1 Kp~~C~~~gC~k~F~~~~~L~~H~r~HtG   29 (29)
T d1a1ia1           1 RPYACPVESCDRRFSRSADLTRHIRIHTG   29 (29)
T ss_dssp             CCEECCSTTCCCEESSHHHHHHHTHHHHT
T ss_pred             CCeECCCCCCCcEECchhHhhhhcCccCC
Confidence            3789999  99999999999999999765

>d2adra1 g.37.1.1 (A:102-130) ADR1 {Synthetic, based on Saccharomyces cerevisiae sequence}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ADR1
species: Synthetic, based on Saccharomyces cerevisiae sequence

Probab=96.79  E-value=0.00039  Score=42.63  Aligned_cols=24  Identities=25%  Similarity=0.728  Sum_probs=22.7

Q ss_pred             CccccccCCCCcccCCHHHHHHHHHhc
Q 015261          233 DFMCLYCNDRCHPFNSLEAVRKHMEAK  259 (410)
Q Consensus       233 ~~~Cl~C~~~gk~F~s~~alr~HM~~k  259 (410)
                      ||+|.+|+   +.|...+.|+.||+.+
T Consensus         2 p~~C~~C~---k~F~~~~~L~~H~r~H   25 (29)
T d2adra1           2 SFVCEVCT---RAFARQEHLKRHYRSH   25 (29)
T ss_dssp             CBCCTTTC---CCBSCHHHHHHHHHTT
T ss_pred             cCCCCCCC---CCCCCchHcccccCcc
Confidence            79999999   9999999999999975

>d1ubdc4 g.37.1.1 (C:381-408) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.66  E-value=0.00039  Score=42.30  Aligned_cols=25  Identities=20%  Similarity=0.377  Sum_probs=23.1

Q ss_pred             CCcccCC--CCCCCCChhHHhhhhhhh
Q 015261          181 DPACCFM--CDLPHDAIENCMVHMHKC  205 (410)
Q Consensus       181 ~p~~Clf--C~~~f~~~~~~~~HM~~~  205 (410)
                      .|+.|.+  |++.|...+.|..||++|
T Consensus         1 rPf~C~~~gC~K~F~~~~~L~~H~r~H   27 (28)
T d1ubdc4           1 RPYVCPFDGCNKKFAQSTNLKSHILTH   27 (28)
T ss_dssp             CCCCCCSTTCCCCCSSTTTTHHHHHHH
T ss_pred             CCcCCCCCCcCCcCCCHHHHHHHHhhc
Confidence            3789998  999999999999999985

>d1zfda_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: SWI5 zinc-finger domains
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=96.63  E-value=0.0005  Score=43.12  Aligned_cols=26  Identities=19%  Similarity=0.331  Sum_probs=24.0

Q ss_pred             CCcccCC--CCCCCCChhHHhhhhhhhh
Q 015261          181 DPACCFM--CDLPHDAIENCMVHMHKCH  206 (410)
Q Consensus       181 ~p~~Clf--C~~~f~~~~~~~~HM~~~H  206 (410)
                      .|+.|.+  |++.|+..+.|..||++|.
T Consensus         2 rP~~C~~pgC~k~F~r~~~L~~H~r~Ht   29 (32)
T d1zfda_           2 RPYSCDHPGCDKAFVRNHDLIRHKKSHQ   29 (32)
T ss_dssp             CSBCCCCTTCCCCBSSSHHHHHHHGGGT
T ss_pred             cCeECcCCCCCCeeCCHHHHHHHhhhcc
Confidence            5899999  9999999999999999864

>d2glia3 g.37.1.1 (A:168-197) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.43  E-value=0.0011  Score=40.95  Aligned_cols=24  Identities=21%  Similarity=0.757  Sum_probs=22.5

Q ss_pred             Cccccc--cCCCCcccCCHHHHHHHHHhc
Q 015261          233 DFMCLY--CNDRCHPFNSLEAVRKHMEAK  259 (410)
Q Consensus       233 ~~~Cl~--C~~~gk~F~s~~alr~HM~~k  259 (410)
                      +|+|.+  |+   |+|...+.|+.||+.+
T Consensus         2 p~~C~~~gCg---k~F~~~~~L~~H~r~H   27 (30)
T d2glia3           2 PHKCTFEGCR---KSYSRLENLKTHLRSH   27 (30)
T ss_dssp             CCCCCSTTCC---CCCSSHHHHHHHHHHT
T ss_pred             CeeCCCCCCC---ceECChhHhhhhcCcC
Confidence            799999  99   9999999999999975

>d1a1ia3 g.37.1.1 (A:160-187) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=96.35  E-value=0.00063  Score=40.44  Aligned_cols=24  Identities=33%  Similarity=0.671  Sum_probs=22.8

Q ss_pred             CCCcccccccccCChHHHhhhhhh
Q 015261            2 PGLTCNSCNREFNDDAEQKLHYKS   25 (410)
Q Consensus         2 ~~ftC~~C~~~F~~~~~qr~H~ks   25 (410)
                      -||.|.+||..|..++..+.|.|.
T Consensus         2 kPf~C~~CgrkFArsderkRH~ki   25 (28)
T d1a1ia3           2 KPFACDICGRKFARSDERKRHTKI   25 (28)
T ss_dssp             CCEECTTTCCEESSHHHHHHHHGG
T ss_pred             CCcccchhhhhhhcchhhhhhhhh
Confidence            489999999999999999999998

>d1zfda_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: SWI5 zinc-finger domains
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=96.20  E-value=0.00099  Score=41.71  Aligned_cols=24  Identities=25%  Similarity=0.569  Sum_probs=22.8

Q ss_pred             CCCcccc--cccccCChHHHhhhhhh
Q 015261            2 PGLTCNS--CNREFNDDAEQKLHYKS   25 (410)
Q Consensus         2 ~~ftC~~--C~~~F~~~~~qr~H~ks   25 (410)
                      -||.|..  |+..|..++.|+.|+++
T Consensus         2 rP~~C~~pgC~k~F~r~~~L~~H~r~   27 (32)
T d1zfda_           2 RPYSCDHPGCDKAFVRNHDLIRHKKS   27 (32)
T ss_dssp             CSBCCCCTTCCCCBSSSHHHHHHHGG
T ss_pred             cCeECcCCCCCCeeCCHHHHHHHhhh
Confidence            4899998  99999999999999999

>d2dmda2 g.37.1.1 (A:8-33) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.15  E-value=0.0015  Score=37.61  Aligned_cols=24  Identities=21%  Similarity=0.544  Sum_probs=22.1

Q ss_pred             CccccccCCCCcccCCHHHHHHHHHhc
Q 015261          233 DFMCLYCNDRCHPFNSLEAVRKHMEAK  259 (410)
Q Consensus       233 ~~~Cl~C~~~gk~F~s~~alr~HM~~k  259 (410)
                      +++|..|+   |.|+....|+.||+.+
T Consensus         1 phkc~~c~---kcfsrkdklk~hmr~h   24 (26)
T d2dmda2           1 PHKCEVCG---KCFSRKDKLKTHMRCH   24 (26)
T ss_dssp             CCCBTTTT---BCCCCHHHHHHHGGGC
T ss_pred             CCccchhh---hHhcchhHHHHHhhcc
Confidence            57999999   9999999999999964

>d2dlka2 g.37.1.1 (A:38-73) Zinc finger protein 692, ZNF692 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 692, ZNF692
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.15  E-value=0.00081  Score=43.26  Aligned_cols=23  Identities=30%  Similarity=0.609  Sum_probs=21.4

Q ss_pred             CCcccc--cccccCChHHHhhhhhh
Q 015261            3 GLTCNS--CNREFNDDAEQKLHYKS   25 (410)
Q Consensus         3 ~ftC~~--C~~~F~~~~~qr~H~ks   25 (410)
                      .|+|..  |+.+|.....|+.||++
T Consensus         1 tf~C~~~~C~k~F~~~~~L~~H~r~   25 (36)
T d2dlka2           1 SFSCPEPACGKSFNFKKHLKEHMKL   25 (36)
T ss_dssp             CEECSCTTTCCEESSHHHHHHHHHH
T ss_pred             CeECCCCCCCCeeCChhHhccccCe
Confidence            378987  99999999999999999

>d1ubdc3 g.37.1.1 (C:351-380) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.13  E-value=0.0012  Score=40.67  Aligned_cols=24  Identities=25%  Similarity=0.614  Sum_probs=22.3

Q ss_pred             Cccccc--cCCCCcccCCHHHHHHHHHhc
Q 015261          233 DFMCLY--CNDRCHPFNSLEAVRKHMEAK  259 (410)
Q Consensus       233 ~~~Cl~--C~~~gk~F~s~~alr~HM~~k  259 (410)
                      +|+|.+  |+   |+|...+.|+.||+.+
T Consensus         2 p~~C~~~gCg---k~F~~~~~L~~H~r~H   27 (30)
T d1ubdc3           2 PFQCTFEGCG---KRFSLDFNLRTHVRIH   27 (30)
T ss_dssp             CEECCSTTCC---CEESCHHHHHHHHHHH
T ss_pred             CccCCCCCCC---ceECcHHHcCcccccc
Confidence            789988  99   9999999999999974

>d1ubdc4 g.37.1.1 (C:381-408) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.13  E-value=0.00053  Score=41.66  Aligned_cols=23  Identities=26%  Similarity=0.569  Sum_probs=22.2

Q ss_pred             CCcccc--cccccCChHHHhhhhhh
Q 015261            3 GLTCNS--CNREFNDDAEQKLHYKS   25 (410)
Q Consensus         3 ~ftC~~--C~~~F~~~~~qr~H~ks   25 (410)
                      ||.|..  |+..|..++.|+.|+|+
T Consensus         2 Pf~C~~~gC~K~F~~~~~L~~H~r~   26 (28)
T d1ubdc4           2 PYVCPFDGCNKKFAQSTNLKSHILT   26 (28)
T ss_dssp             CCCCCSTTCCCCCSSTTTTHHHHHH
T ss_pred             CcCCCCCCcCCcCCCHHHHHHHHhh
Confidence            899988  99999999999999998

>d1ncsa_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: SWI5 zinc-finger domains
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=95.94  E-value=0.00066  Score=46.32  Aligned_cols=27  Identities=15%  Similarity=0.253  Sum_probs=25.5

Q ss_pred             CCcccCC--CCCCCCChhHHhhhhhhhhc
Q 015261          181 DPACCFM--CDLPHDAIENCMVHMHKCHG  207 (410)
Q Consensus       181 ~p~~Clf--C~~~f~~~~~~~~HM~~~Hg  207 (410)
                      .|+.|.+  |++.|...+.|..||++|.|
T Consensus        17 kpy~C~~~~C~k~F~~~~~L~~H~r~Htg   45 (47)
T d1ncsa_          17 KTFECLFPGCTKTFKRRYNIRSHIQTHLE   45 (47)
T ss_dssp             TEEECCCTTCCCEECSSSSHHHHHHHHTT
T ss_pred             CCeECCcCCCCccccCchHHHhhcccccC
Confidence            7999999  99999999999999999876

>d1a1ia3 g.37.1.1 (A:160-187) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=95.85  E-value=0.0017  Score=38.60  Aligned_cols=25  Identities=16%  Similarity=0.300  Sum_probs=23.3

Q ss_pred             CCcccCCCCCCCCChhHHhhhhhhh
Q 015261          181 DPACCFMCDLPHDAIENCMVHMHKC  205 (410)
Q Consensus       181 ~p~~ClfC~~~f~~~~~~~~HM~~~  205 (410)
                      .|+.|.+||+.|....+...|+.+|
T Consensus         2 kPf~C~~CgrkFArsderkRH~kiH   26 (28)
T d1a1ia3           2 KPFACDICGRKFARSDERKRHTKIH   26 (28)
T ss_dssp             CCEECTTTCCEESSHHHHHHHHGGG
T ss_pred             CCcccchhhhhhhcchhhhhhhhhc
Confidence            5899999999999999999999985

>d1klra_ g.37.1.1 (A:) ZFY {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZFY
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.79  E-value=0.003  Score=37.59  Aligned_cols=27  Identities=19%  Similarity=0.388  Sum_probs=25.5

Q ss_pred             CCcccCCCCCCCCChhHHhhhhhhhhc
Q 015261          181 DPACCFMCDLPHDAIENCMVHMHKCHG  207 (410)
Q Consensus       181 ~p~~ClfC~~~f~~~~~~~~HM~~~Hg  207 (410)
                      .|++|.+|...+.+.+.|..|..+.|+
T Consensus         1 kpy~cqyc~yrsadssnlkthiktkhs   27 (30)
T d1klra_           1 KTYQCQYCEFRSADSSNLKTHIKTKHS   27 (30)
T ss_dssp             CCCCCSSSSCCCSCSHHHHHHHHHHTS
T ss_pred             CCccccccccccccchhhhhhhhcccc
Confidence            389999999999999999999999998

>d1a1ia1 g.37.1.1 (A:103-131) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=95.77  E-value=0.0013  Score=40.20  Aligned_cols=23  Identities=26%  Similarity=0.625  Sum_probs=22.0

Q ss_pred             CCcccc--cccccCChHHHhhhhhh
Q 015261            3 GLTCNS--CNREFNDDAEQKLHYKS   25 (410)
Q Consensus         3 ~ftC~~--C~~~F~~~~~qr~H~ks   25 (410)
                      ||.|..  |+..|..++.|+.|+++
T Consensus         2 p~~C~~~gC~k~F~~~~~L~~H~r~   26 (29)
T d1a1ia1           2 PYACPVESCDRRFSRSADLTRHIRI   26 (29)
T ss_dssp             CEECCSTTCCCEESSHHHHHHHTHH
T ss_pred             CeECCCCCCCcEECchhHhhhhcCc
Confidence            799988  99999999999999998

>d1ncsa_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: SWI5 zinc-finger domains
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=95.63  E-value=0.0015  Score=44.46  Aligned_cols=29  Identities=17%  Similarity=0.536  Sum_probs=26.0

Q ss_pred             CCCCCcccccC--cCCccCChHHHHHHHhhh
Q 015261           61 NATPMTYSCGL--CGKGYRSSKALAQHLNSR   89 (410)
Q Consensus        61 ~~~~~~~~C~~--C~K~f~s~~~l~~Hl~sk   89 (410)
                      +.++++|.|.+  |+|.|.....|..|++..
T Consensus        13 h~gekpy~C~~~~C~k~F~~~~~L~~H~r~H   43 (47)
T d1ncsa_          13 EMPDKTFECLFPGCTKTFKRRYNIRSHIQTH   43 (47)
T ss_dssp             EETTTEEECCCTTCCCEECSSSSHHHHHHHH
T ss_pred             ccCCCCeECCcCCCCccccCchHHHhhcccc
Confidence            46789999988  999999999999999863

>d1njqa_ g.37.1.3 (A:) SUPERMAN zinc finger domain {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Plant C2H2 finger (QALGGH zinc finger)
domain: SUPERMAN zinc finger domain
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=95.62  E-value=0.0027  Score=40.75  Aligned_cols=26  Identities=35%  Similarity=0.869  Sum_probs=23.2

Q ss_pred             CcccccCcCCccCChHHHHHHHhhhh
Q 015261           65 MTYSCGLCGKGYRSSKALAQHLNSRS   90 (410)
Q Consensus        65 ~~~~C~~C~K~f~s~~~l~~Hl~skk   90 (410)
                      +.|.|.+|+|.|.+-.||--||++.+
T Consensus         4 r~~~C~~C~k~F~s~qALGGH~~~Hr   29 (37)
T d1njqa_           4 RSYTCSFCKREFRSAQALGGHMNVHR   29 (37)
T ss_dssp             SSEECTTTCCEESSHHHHHHHHHTTC
T ss_pred             CccCCCCCCCccCCcccccchHhhhc
Confidence            46999999999999999999997653

>d1sp2a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor sp1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.52  E-value=0.0038  Score=38.60  Aligned_cols=24  Identities=25%  Similarity=0.786  Sum_probs=21.7

Q ss_pred             Cccccc--cCCCCcccCCHHHHHHHHHhc
Q 015261          233 DFMCLY--CNDRCHPFNSLEAVRKHMEAK  259 (410)
Q Consensus       233 ~~~Cl~--C~~~gk~F~s~~alr~HM~~k  259 (410)
                      +|.|.+  |+   |+|...+.|+.||+.+
T Consensus         2 pf~C~~~~C~---k~F~~~~~L~~H~r~H   27 (31)
T d1sp2a_           2 PFMCTWSYCG---KRFTRSDELQRHKRTH   27 (31)
T ss_dssp             CCBCCSTTCC---CBCSSHHHHHHHHTTT
T ss_pred             cCCCcCCCCC---cCcCChhHhhhhcCcc
Confidence            789975  99   9999999999999874

>d2dlqa3 g.37.1.1 (A:63-92) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=95.38  E-value=0.0022  Score=38.03  Aligned_cols=24  Identities=33%  Similarity=0.638  Sum_probs=22.6

Q ss_pred             CCCcccccccccCChHHHhhhhhh
Q 015261            2 PGLTCNSCNREFNDDAEQKLHYKS   25 (410)
Q Consensus         2 ~~ftC~~C~~~F~~~~~qr~H~ks   25 (410)
                      ..|||..|+..|..+-.+|.||-|
T Consensus         3 qvftcs~cqe~f~rrmelr~hmvs   26 (30)
T d2dlqa3           3 QVFTCSVCQETFRRRMELRLHMVS   26 (30)
T ss_dssp             CCEECSSSCCEESSHHHHHHHHHH
T ss_pred             ceEEeHHHHHHHHHHHhheeeeec
Confidence            369999999999999999999998

>d2dmda3 g.37.1.1 (A:62-90) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.18  E-value=0.0032  Score=37.13  Aligned_cols=27  Identities=22%  Similarity=0.480  Sum_probs=25.0

Q ss_pred             CCcccCCCCCCCCChhHHhhhhhhhhc
Q 015261          181 DPACCFMCDLPHDAIENCMVHMHKCHG  207 (410)
Q Consensus       181 ~p~~ClfC~~~f~~~~~~~~HM~~~Hg  207 (410)
                      .|++|.+|.....+.+.|..|++.|.|
T Consensus         2 rpfkcqlcsy~srnssqltvhlr~htg   28 (29)
T d2dmda3           2 RPFKCQICPYASRNSSQLTVHLRSHTG   28 (29)
T ss_dssp             CCEECSSSSCEESSHHHHHHHHTTCCS
T ss_pred             CcceeeecccccCCchheEEeeecccC
Confidence            589999999999999999999999766

>d1x5wa2 g.37.1.1 (A:36-64) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.18  E-value=0.0035  Score=37.23  Aligned_cols=27  Identities=33%  Similarity=0.573  Sum_probs=24.8

Q ss_pred             CCcccCCCCCCCCChhHHhhhhhhhhc
Q 015261          181 DPACCFMCDLPHDAIENCMVHMHKCHG  207 (410)
Q Consensus       181 ~p~~ClfC~~~f~~~~~~~~HM~~~Hg  207 (410)
                      .|++|.||..--.+.++|.+||.+.||
T Consensus         1 rPFkC~~CsFDtkq~SnL~kH~kk~H~   27 (29)
T d1x5wa2           1 RPFKCNYCSFDTKQPSNLSKHMKKFHG   27 (29)
T ss_dssp             CSEECSSSSCEESSHHHHHHHHHHHHS
T ss_pred             CCcccceecccccCcchHHHHHHHHcc
Confidence            378999999888999999999999998

>d2adra2 g.37.1.1 (A:131-161) ADR1 {Synthetic, based on Saccharomyces cerevisiae sequence}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ADR1
species: Synthetic, based on Saccharomyces cerevisiae sequence

Probab=95.08  E-value=0.0047  Score=37.42  Aligned_cols=27  Identities=22%  Similarity=0.354  Sum_probs=25.3

Q ss_pred             CcccCCCCCCCCChhHHhhhhhhhhcC
Q 015261          182 PACCFMCDLPHDAIENCMVHMHKCHGF  208 (410)
Q Consensus       182 p~~ClfC~~~f~~~~~~~~HM~~~Hgf  208 (410)
                      |+.|.+|++.|+...-++.|..+-|+.
T Consensus         1 Pf~C~~C~R~FaRrDLlLRH~qKlH~g   27 (31)
T d2adra2           1 PYPCGLCNRAFTRRDLLIRHAQKIHSG   27 (31)
T ss_dssp             SEECTTTCCEESSHHHHHHHHTTTSCC
T ss_pred             CcccccccchhhHHHHHHHHHHHHhcC
Confidence            689999999999999999999999984

>d2glia5 g.37.1.1 (A:229-257) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.92  E-value=0.0044  Score=37.19  Aligned_cols=27  Identities=22%  Similarity=0.463  Sum_probs=24.5

Q ss_pred             CCcccCC--CCCCCCChhHHhhhhhhhhc
Q 015261          181 DPACCFM--CDLPHDAIENCMVHMHKCHG  207 (410)
Q Consensus       181 ~p~~Clf--C~~~f~~~~~~~~HM~~~Hg  207 (410)
                      .|+.|.+  |++++...+.|.+||..+||
T Consensus         1 KPY~Ck~~gC~K~YtdPSSLRKH~k~~HG   29 (29)
T d2glia5           1 KPYVCKLPGCTKRYTDPSSLRKHVKTVHG   29 (29)
T ss_dssp             CCEECCSTTTCCEESSHHHHHHHHHHSCC
T ss_pred             CCeecccCCCCcccCCHHHHHHHHHhhCC
Confidence            3788988  99999999999999999997

>d2epqa1 g.37.1.1 (A:380-411) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.45  E-value=0.0093  Score=35.83  Aligned_cols=27  Identities=26%  Similarity=0.693  Sum_probs=23.7

Q ss_pred             CCcccccCcCCccCChHHHHHHHhhhh
Q 015261           64 PMTYSCGLCGKGYRSSKALAQHLNSRS   90 (410)
Q Consensus        64 ~~~~~C~~C~K~f~s~~~l~~Hl~skk   90 (410)
                      +++|.|++|+..|+.+.-+.-|++|..
T Consensus         1 ekp~~cpic~qrfkrkdrmsyhvrshd   27 (32)
T d2epqa1           1 EKPYSCPVCGLRFKRKDRMSYHVRSHD   27 (32)
T ss_dssp             CCSSEETTTTEECSCHHHHHHHHHHHS
T ss_pred             CCCcccchHHHHhhccccceEeeeccc
Confidence            468999999999999999999998853

>d2glia5 g.37.1.1 (A:229-257) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=93.82  E-value=0.011  Score=35.42  Aligned_cols=24  Identities=21%  Similarity=0.560  Sum_probs=22.2

Q ss_pred             CCcccc--cccccCChHHHhhhhhhc
Q 015261            3 GLTCNS--CNREFNDDAEQKLHYKSD   26 (410)
Q Consensus         3 ~ftC~~--C~~~F~~~~~qr~H~ksd   26 (410)
                      ||.|..  |+..+.+++.||.|+|+.
T Consensus         2 PY~Ck~~gC~K~YtdPSSLRKH~k~~   27 (29)
T d2glia5           2 PYVCKLPGCTKRYTDPSSLRKHVKTV   27 (29)
T ss_dssp             CEECCSTTTCCEESSHHHHHHHHHHS
T ss_pred             CeecccCCCCcccCCHHHHHHHHHhh
Confidence            788977  999999999999999985

>d2dlqa1 g.37.1.1 (A:93-118) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=93.59  E-value=0.012  Score=33.41  Aligned_cols=23  Identities=22%  Similarity=0.563  Sum_probs=21.1

Q ss_pred             CCcccccccccCChHHHhhhhhh
Q 015261            3 GLTCNSCNREFNDDAEQKLHYKS   25 (410)
Q Consensus         3 ~ftC~~C~~~F~~~~~qr~H~ks   25 (410)
                      ||.|.+|..+|-...++..||-.
T Consensus         2 pykcsscsqqfmqkkdlqshmik   24 (26)
T d2dlqa1           2 PYKCSSCSQQFMQKKDLQSHMIK   24 (26)
T ss_dssp             SEECSSSCCEESSHHHHHHHHHH
T ss_pred             CCcccHHHHHHHHHHHHHHHHHh
Confidence            79999999999999999999853

>d1klra_ g.37.1.1 (A:) ZFY {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZFY
species: Human (Homo sapiens) [TaxId: 9606]

Probab=93.10  E-value=0.028  Score=33.30  Aligned_cols=29  Identities=24%  Similarity=0.448  Sum_probs=24.5

Q ss_pred             CcccccCcCCccCChHHHHHHHhhhhhhh
Q 015261           65 MTYSCGLCGKGYRSSKALAQHLNSRSHIM   93 (410)
Q Consensus        65 ~~~~C~~C~K~f~s~~~l~~Hl~skkHk~   93 (410)
                      ++|.|..|.......+.|+.|+++|..++
T Consensus         1 kpy~cqyc~yrsadssnlkthiktkhske   29 (30)
T d1klra_           1 KTYQCQYCEFRSADSSNLKTHIKTKHSKE   29 (30)
T ss_dssp             CCCCCSSSSCCCSCSHHHHHHHHHHTSSC
T ss_pred             CCccccccccccccchhhhhhhhcccccC
Confidence            37899999988888999999999876543

>d1znfa_ g.37.1.1 (A:) XFIN, third domain {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: XFIN, third domain
species: Xenopus laevis [TaxId: 8355]

Probab=92.46  E-value=0.043  Score=31.08  Aligned_cols=24  Identities=33%  Similarity=0.843  Sum_probs=21.2

Q ss_pred             ccccCcCCccCChHHHHHHHhhhh
Q 015261           67 YSCGLCGKGYRSSKALAQHLNSRS   90 (410)
Q Consensus        67 ~~C~~C~K~f~s~~~l~~Hl~skk   90 (410)
                      |+|..|.++|-.+++|..|++-.|
T Consensus         1 ykcglcersfveksalsrhqrvhk   24 (26)
T d1znfa_           1 YKCGLCERSFVEKSALSRHQRVHK   24 (26)
T ss_dssp             CBCSSSCCBCSSHHHHHHHGGGTC
T ss_pred             CcccchHHHHHHHHHHHHHHHhhc
Confidence            679999999999999999987543

>d1zr9a1 g.37.1.4 (A:28-94) Zinc finger protein 593, ZNF593 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: HkH motif-containing C2H2 finger
domain: Zinc finger protein 593, ZNF593
species: Human (Homo sapiens) [TaxId: 9606]

Probab=92.21  E-value=0.015  Score=42.19  Aligned_cols=30  Identities=30%  Similarity=0.491  Sum_probs=26.4

Q ss_pred             CCCcccccccccCChHHHhhhhhhccccch
Q 015261            2 PGLTCNSCNREFNDDAEQKLHYKSDWHRYN   31 (410)
Q Consensus         2 ~~ftC~~C~~~F~~~~~qr~H~ksdwHrYN   31 (410)
                      ..|-|..|+..|.+...+..|++|-=|+=+
T Consensus        14 gqfYCv~C~K~F~se~~l~~H~ksKkHKrr   43 (67)
T d1zr9a1          14 GLHRCLACARYFIDSTNLKTHFRSKDHKKR   43 (67)
T ss_dssp             GCSEETTTTEECSSHHHHHHHTTCHHHHHH
T ss_pred             CEEecccccCccCCHHHHHHHHcccHHHHH
Confidence            458999999999999999999999888433

>d2epqa1 g.37.1.1 (A:380-411) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=92.15  E-value=0.027  Score=33.78  Aligned_cols=24  Identities=21%  Similarity=0.501  Sum_probs=22.6

Q ss_pred             CCCcccccccccCChHHHhhhhhh
Q 015261            2 PGLTCNSCNREFNDDAEQKLHYKS   25 (410)
Q Consensus         2 ~~ftC~~C~~~F~~~~~qr~H~ks   25 (410)
                      -||.|..|+..|...+-...|.+|
T Consensus         2 kp~~cpic~qrfkrkdrmsyhvrs   25 (32)
T d2epqa1           2 KPYSCPVCGLRFKRKDRMSYHVRS   25 (32)
T ss_dssp             CSSEETTTTEECSCHHHHHHHHHH
T ss_pred             CCcccchHHHHhhccccceEeeec
Confidence            489999999999999999999998

>d2glia2 g.37.1.1 (A:135-167) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=91.87  E-value=0.054  Score=33.57  Aligned_cols=27  Identities=26%  Similarity=0.703  Sum_probs=23.8

Q ss_pred             Cccccc--cCCCCcccCCHHHHHHHHHhc
Q 015261          233 DFMCLY--CNDRCHPFNSLEAVRKHMEAK  259 (410)
Q Consensus       233 ~~~Cl~--C~~~gk~F~s~~alr~HM~~k  259 (410)
                      .|.|.|  |.-.|+.|.+...|..||+.+
T Consensus         2 ~y~C~W~~C~R~~~pf~a~YkLv~H~R~H   30 (33)
T d2glia2           2 EFVCHWGGCSRELRPFKAQYMLVVHMRRH   30 (33)
T ss_dssp             CCCCCBTTCTTTTCCCSSHHHHHHHTHHH
T ss_pred             CeEEECCCCCCCCCcchhHHHHHHHHhhc
Confidence            478888  888889999999999999964

>d1bboa1 g.37.1.1 (A:1-28) Enhancer binding protein {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Enhancer binding protein
species: Human (Homo sapiens) [TaxId: 9606]

Probab=91.86  E-value=0.039  Score=32.46  Aligned_cols=22  Identities=18%  Similarity=0.430  Sum_probs=21.5

Q ss_pred             CcccccccccCChHHHhhhhhh
Q 015261            4 LTCNSCNREFNDDAEQKLHYKS   25 (410)
Q Consensus         4 ftC~~C~~~F~~~~~qr~H~ks   25 (410)
                      |.|..|++...-++.|+.|.|+
T Consensus         2 YvC~~Cg~~C~KPSvL~KHIRs   23 (28)
T d1bboa1           2 YICEECGIRAKKPSMLKKHIRT   23 (28)
T ss_dssp             CBCTTTCCBCSSHHHHHHHHHH
T ss_pred             ccccccCcccCCHHHHHHHHHH
Confidence            8899999999999999999999

>d2csha2 g.37.1.1 (A:61-104) Zinc finger protein 297b {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 297b
species: Human (Homo sapiens) [TaxId: 9606]

Probab=91.62  E-value=0.052  Score=35.00  Aligned_cols=26  Identities=23%  Similarity=0.598  Sum_probs=23.1

Q ss_pred             CCCcccccCcCCccCChHHHHHHHhh
Q 015261           63 TPMTYSCGLCGKGYRSSKALAQHLNS   88 (410)
Q Consensus        63 ~~~~~~C~~C~K~f~s~~~l~~Hl~s   88 (410)
                      +.++|.|.+|+|.|--+-++..|..+
T Consensus         2 GiKPYeC~~C~KrFMWRDSF~RH~~~   27 (44)
T d2csha2           2 GIKPYECNICAKRFMWRDSFHRHVTS   27 (44)
T ss_dssp             CCCCEECSSSCCEESCHHHHHHHHHH
T ss_pred             CCCceeccchhhhhhhHHHHHHhhhh
Confidence            56899999999999999999988764

>d2dlqa1 g.37.1.1 (A:93-118) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=91.41  E-value=0.056  Score=30.58  Aligned_cols=23  Identities=22%  Similarity=0.556  Sum_probs=21.4

Q ss_pred             CccccccCCCCcccCCHHHHHHHHHh
Q 015261          233 DFMCLYCNDRCHPFNSLEAVRKHMEA  258 (410)
Q Consensus       233 ~~~Cl~C~~~gk~F~s~~alr~HM~~  258 (410)
                      +|+|..|.   ..|-....|+.||..
T Consensus         2 pykcsscs---qqfmqkkdlqshmik   24 (26)
T d2dlqa1           2 PYKCSSCS---QQFMQKKDLQSHMIK   24 (26)
T ss_dssp             SEECSSSC---CEESSHHHHHHHHHH
T ss_pred             CCcccHHH---HHHHHHHHHHHHHHh
Confidence            68999999   999999999999984

>d2dmda3 g.37.1.1 (A:62-90) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=91.29  E-value=0.055  Score=31.69  Aligned_cols=26  Identities=31%  Similarity=0.599  Sum_probs=22.1

Q ss_pred             CCcccccCcCCccCChHHHHHHHhhh
Q 015261           64 PMTYSCGLCGKGYRSSKALAQHLNSR   89 (410)
Q Consensus        64 ~~~~~C~~C~K~f~s~~~l~~Hl~sk   89 (410)
                      +++|+|.+|.-.-+..+.|..|+++.
T Consensus         1 erpfkcqlcsy~srnssqltvhlr~h   26 (29)
T d2dmda3           1 ERPFKCQICPYASRNSSQLTVHLRSH   26 (29)
T ss_dssp             CCCEECSSSSCEESSHHHHHHHHTTC
T ss_pred             CCcceeeecccccCCchheEEeeecc
Confidence            36899999998778888899999874

>d1njqa_ g.37.1.3 (A:) SUPERMAN zinc finger domain {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Plant C2H2 finger (QALGGH zinc finger)
domain: SUPERMAN zinc finger domain
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=91.28  E-value=0.054  Score=34.47  Aligned_cols=25  Identities=32%  Similarity=0.808  Sum_probs=22.7

Q ss_pred             CccccccCCCCcccCCHHHHHHHHHhcC
Q 015261          233 DFMCLYCNDRCHPFNSLEAVRKHMEAKR  260 (410)
Q Consensus       233 ~~~Cl~C~~~gk~F~s~~alr~HM~~k~  260 (410)
                      .|+|.+|+   |.|.|-.||=-||+.+.
T Consensus         5 ~~~C~~C~---k~F~s~qALGGH~~~Hr   29 (37)
T d1njqa_           5 SYTCSFCK---REFRSAQALGGHMNVHR   29 (37)
T ss_dssp             SEECTTTC---CEESSHHHHHHHHHTTC
T ss_pred             ccCCCCCC---CccCCcccccchHhhhc
Confidence            58999999   99999999999998754

>d2dmda1 g.37.1.1 (A:34-61) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=90.92  E-value=0.043  Score=31.88  Aligned_cols=25  Identities=20%  Similarity=0.344  Sum_probs=23.3

Q ss_pred             CCcccCCCCCCCCChhHHhhhhhhh
Q 015261          181 DPACCFMCDLPHDAIENCMVHMHKC  205 (410)
Q Consensus       181 ~p~~ClfC~~~f~~~~~~~~HM~~~  205 (410)
                      .|++|-.|++...+.+.|.+|.++|
T Consensus         2 kp~kck~cdyaaadsssl~kh~rih   26 (28)
T d2dmda1           2 KPYKCKTCDYAAADSSSLNKHLRIH   26 (28)
T ss_dssp             CSEECSSSCCEESSHHHHHHHHHHS
T ss_pred             CCcccccccchhcchhhHhhhhhcc
Confidence            6899999999999999999999985

>d1ubdc2 g.37.1.1 (C:323-350) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=90.75  E-value=0.052  Score=31.63  Aligned_cols=25  Identities=16%  Similarity=0.187  Sum_probs=22.6

Q ss_pred             cccCCCCCCCCChhHHhhhhhhhhc
Q 015261          183 ACCFMCDLPHDAIENCMVHMHKCHG  207 (410)
Q Consensus       183 ~~ClfC~~~f~~~~~~~~HM~~~Hg  207 (410)
                      ..|..||+.|...+.|..|...|.|
T Consensus         3 hvc~ecgkaf~essklkrh~lvhtg   27 (28)
T d1ubdc2           3 HVCAECGKAFVESSKLKRHQLVHTG   27 (28)
T ss_dssp             EECTTTCCEESSHHHHHHHGGGTSC
T ss_pred             chHHHHhHHHHHHHHHHHHhhcccC
Confidence            4699999999999999999998765

>d1wira_ g.37.1.5 (A:) Protein arginine N-methyltransferase 3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: variant C2H2 finger
domain: Protein arginine N-methyltransferase 3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=90.50  E-value=0.058  Score=43.52  Aligned_cols=30  Identities=30%  Similarity=0.587  Sum_probs=27.6

Q ss_pred             CCcccccccccCChHHHhhhhhhccccchhh
Q 015261            3 GLTCNSCNREFNDDAEQKLHYKSDWHRYNLK   33 (410)
Q Consensus         3 ~ftC~~C~~~F~~~~~qr~H~ksdwHrYNlK   33 (410)
                      +-+|.+|...|.+......|||+. |.|||.
T Consensus        15 ~~~CLFCd~~f~s~~~~l~H~k~~-H~FD~~   44 (121)
T d1wira_          15 HTPCLFCDRLFASAEETFSHCKLE-HQFNID   44 (121)
T ss_dssp             CEECSSSCCEESSHHHHHHHHHHS-SCCCHH
T ss_pred             cceecccCCccCCHHHHHHHHHHh-hCCCHH
Confidence            468999999999999999999998 889985

>d2adra2 g.37.1.1 (A:131-161) ADR1 {Synthetic, based on Saccharomyces cerevisiae sequence}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ADR1
species: Synthetic, based on Saccharomyces cerevisiae sequence

Probab=89.65  E-value=0.057  Score=32.55  Aligned_cols=23  Identities=26%  Similarity=0.459  Sum_probs=21.2

Q ss_pred             CCcccccccccCChHHHhhhhhh
Q 015261            3 GLTCNSCNREFNDDAEQKLHYKS   25 (410)
Q Consensus         3 ~ftC~~C~~~F~~~~~qr~H~ks   25 (410)
                      ||.|..|+..|..++++..|..-
T Consensus         1 Pf~C~~C~R~FaRrDLlLRH~qK   23 (31)
T d2adra2           1 PYPCGLCNRAFTRRDLLIRHAQK   23 (31)
T ss_dssp             SEECTTTCCEESSHHHHHHHHTT
T ss_pred             CcccccccchhhHHHHHHHHHHH
Confidence            79999999999999999999765

>d2dlqa4 g.37.1.1 (A:8-34) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=89.36  E-value=0.13  Score=29.52  Aligned_cols=24  Identities=25%  Similarity=0.240  Sum_probs=22.5

Q ss_pred             ccCCCCCCCCChhHHhhhhhhhhc
Q 015261          184 CCFMCDLPHDAIENCMVHMHKCHG  207 (410)
Q Consensus       184 ~ClfC~~~f~~~~~~~~HM~~~Hg  207 (410)
                      +|..|.+.|.+..-|..|-++|.|
T Consensus         2 qcp~c~k~f~skyylkvhnr~htg   25 (27)
T d2dlqa4           2 ECPTCHKKFLSKYYLKVHNRKHTG   25 (27)
T ss_dssp             CCTTTCCCCSSHHHHHHHHHHHSS
T ss_pred             cCcchHHHHHHhHhhhhccccccC
Confidence            799999999999999999999876

>d2dlqa3 g.37.1.1 (A:63-92) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=89.30  E-value=0.12  Score=30.28  Aligned_cols=26  Identities=23%  Similarity=0.623  Sum_probs=23.2

Q ss_pred             CCcccccCcCCccCChHHHHHHHhhh
Q 015261           64 PMTYSCGLCGKGYRSSKALAQHLNSR   89 (410)
Q Consensus        64 ~~~~~C~~C~K~f~s~~~l~~Hl~sk   89 (410)
                      +..|.|.+|...|+.+-.|.-||.|.
T Consensus         2 eqvftcs~cqe~f~rrmelr~hmvsh   27 (30)
T d2dlqa3           2 EQVFTCSVCQETFRRRMELRLHMVSH   27 (30)
T ss_dssp             CCCEECSSSCCEESSHHHHHHHHHHH
T ss_pred             cceEEeHHHHHHHHHHHhheeeeecc
Confidence            45789999999999999999999874

>d2yrka1 g.37.1.4 (A:8-55) Zinc finger homeobox protein 4, ZFHX4 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: HkH motif-containing C2H2 finger
domain: Zinc finger homeobox protein 4, ZFHX4
species: Human (Homo sapiens) [TaxId: 9606]

Probab=89.25  E-value=0.064  Score=35.78  Aligned_cols=31  Identities=29%  Similarity=0.657  Sum_probs=27.7

Q ss_pred             ccccCcCCccCChHHHHHHHhhhhhhhhhcc
Q 015261           67 YSCGLCGKGYRSSKALAQHLNSRSHIMRASQ   97 (410)
Q Consensus        67 ~~C~~C~K~f~s~~~l~~Hl~skkHk~~~~~   97 (410)
                      -.|.+|+..|..+-+.+.|+-++.|+.+++.
T Consensus         7 ~eC~lC~vKYs~~~SvrdHiFskqHI~~Vk~   37 (48)
T d2yrka1           7 PECTLCGVKYSARLSIRDHIFSKQHISKVRE   37 (48)
T ss_dssp             SCCTTTTCCCCSSSCHHHHHTSHHHHHHHHH
T ss_pred             ccCcccceeeeeecchHhhhhhHHHHHHHHH
Confidence            4699999999999999999999999986554

>d1y0jb1 g.37.1.2 (B:1-36) U-shaped transcription factor, different fingers {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: C2HC finger
domain: U-shaped transcription factor, different fingers
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

Probab=89.19  E-value=0.11  Score=31.76  Aligned_cols=23  Identities=17%  Similarity=0.437  Sum_probs=20.7

Q ss_pred             CCCcccccccccCChHHHhhhhh
Q 015261            2 PGLTCNSCNREFNDDAEQKLHYK   24 (410)
Q Consensus         2 ~~ftC~~C~~~F~~~~~qr~H~k   24 (410)
                      ..|.|.-||+.|.+.+.+-.|..
T Consensus         7 arf~c~pcgirfss~stleahqt   29 (36)
T d1y0jb1           7 ARFMCLPCGIAFSSPSTLEAHQA   29 (36)
T ss_dssp             CCCBCTTTCCBCSCHHHHHHHTT
T ss_pred             cceeccccceeecChhHHHhhhh
Confidence            45899999999999999999975

>d1bboa1 g.37.1.1 (A:1-28) Enhancer binding protein {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Enhancer binding protein
species: Human (Homo sapiens) [TaxId: 9606]

Probab=87.68  E-value=0.18  Score=29.55  Aligned_cols=25  Identities=12%  Similarity=0.183  Sum_probs=23.0

Q ss_pred             cccCCCCCCCCChhHHhhhhhhhhc
Q 015261          183 ACCFMCDLPHDAIENCMVHMHKCHG  207 (410)
Q Consensus       183 ~~ClfC~~~f~~~~~~~~HM~~~Hg  207 (410)
                      +.|.+||....-.+-|.+|.+.|.+
T Consensus         2 YvC~~Cg~~C~KPSvL~KHIRsHT~   26 (28)
T d1bboa1           2 YICEECGIRAKKPSMLKKHIRTHTD   26 (28)
T ss_dssp             CBCTTTCCBCSSHHHHHHHHHHTSS
T ss_pred             ccccccCcccCCHHHHHHHHHHhcC
Confidence            6799999999999999999999765

>d2eppa1 g.37.1.1 (A:286-338) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=87.44  E-value=0.11  Score=34.56  Aligned_cols=23  Identities=26%  Similarity=0.533  Sum_probs=21.5

Q ss_pred             CCcccccccccCChHHHhhhhhh
Q 015261            3 GLTCNSCNREFNDDAEQKLHYKS   25 (410)
Q Consensus         3 ~ftC~~C~~~F~~~~~qr~H~ks   25 (410)
                      .|.|.+|++.|.++.-+|.|-..
T Consensus         6 l~pCG~CgK~Ftd~~rLr~HEAQ   28 (53)
T d2eppa1           6 ILPCGLCGKVFTDANRLRQHEAQ   28 (53)
T ss_dssp             CCCCTTTCCCCSCHHHHHHHHHH
T ss_pred             eeeccccccccCCHHHHhHhHHh
Confidence            58999999999999999999887

>d2dlqa2 g.37.1.1 (A:35-62) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=86.63  E-value=0.2  Score=28.90  Aligned_cols=23  Identities=26%  Similarity=0.267  Sum_probs=20.5

Q ss_pred             CcccCCCCCCCCChhHHhhhhhh
Q 015261          182 PACCFMCDLPHDAIENCMVHMHK  204 (410)
Q Consensus       182 p~~ClfC~~~f~~~~~~~~HM~~  204 (410)
                      |++|+-||+.+-..+.|++|-..
T Consensus         1 pf~c~kcgkcyfrkenllehear   23 (28)
T d2dlqa2           1 PFECPKCGKCYFRKENLLEHEAR   23 (28)
T ss_dssp             SCBCTTTCCBCSSHHHHHHHHHH
T ss_pred             CCccccchhhhhhHhHHHHHHHH
Confidence            67999999999999999999653

>d2glia4 g.37.1.1 (A:198-228) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=85.84  E-value=0.072  Score=32.07  Aligned_cols=23  Identities=17%  Similarity=0.670  Sum_probs=20.9

Q ss_pred             CCcccc--cccccCChHHHhhhh-hh
Q 015261            3 GLTCNS--CNREFNDDAEQKLHY-KS   25 (410)
Q Consensus         3 ~ftC~~--C~~~F~~~~~qr~H~-ks   25 (410)
                      ||.|..  |.++|.++++.-.|. ||
T Consensus         2 PY~C~~~gC~KafsNsSDraKHqnRT   27 (31)
T d2glia4           2 PYMCEHEGCSKAFSNASDRAKHQNRT   27 (31)
T ss_dssp             CEECCSTTCCCEESSSSTTHHHHHHT
T ss_pred             CccccCCChhhhhcchhhhhhhcccc
Confidence            799988  999999999999996 66

>d1y0jb1 g.37.1.2 (B:1-36) U-shaped transcription factor, different fingers {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: C2HC finger
domain: U-shaped transcription factor, different fingers
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

Probab=85.83  E-value=0.24  Score=30.11  Aligned_cols=24  Identities=29%  Similarity=0.664  Sum_probs=21.0

Q ss_pred             CCcccccCcCCccCChHHHHHHHh
Q 015261           64 PMTYSCGLCGKGYRSSKALAQHLN   87 (410)
Q Consensus        64 ~~~~~C~~C~K~f~s~~~l~~Hl~   87 (410)
                      +..|.|..|+-.|++.++|..|+.
T Consensus         6 parf~c~pcgirfss~stleahqt   29 (36)
T d1y0jb1           6 PARFMCLPCGIAFSSPSTLEAHQA   29 (36)
T ss_dssp             CCCCBCTTTCCBCSCHHHHHHHTT
T ss_pred             ccceeccccceeecChhHHHhhhh
Confidence            346899999999999999999974

>d1znfa_ g.37.1.1 (A:) XFIN, third domain {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: XFIN, third domain
species: Xenopus laevis [TaxId: 8355]

Probab=85.24  E-value=0.32  Score=27.37  Aligned_cols=23  Identities=13%  Similarity=0.132  Sum_probs=21.1

Q ss_pred             cccCCCCCCCCChhHHhhhhhhh
Q 015261          183 ACCFMCDLPHDAIENCMVHMHKC  205 (410)
Q Consensus       183 ~~ClfC~~~f~~~~~~~~HM~~~  205 (410)
                      ++|-.|.++|-..+.+..|.+.|
T Consensus         1 ykcglcersfveksalsrhqrvh   23 (26)
T d1znfa_           1 YKCGLCERSFVEKSALSRHQRVH   23 (26)
T ss_dssp             CBCSSSCCBCSSHHHHHHHGGGT
T ss_pred             CcccchHHHHHHHHHHHHHHHhh
Confidence            57999999999999999999975

>d2csha2 g.37.1.1 (A:61-104) Zinc finger protein 297b {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 297b
species: Human (Homo sapiens) [TaxId: 9606]

Probab=84.88  E-value=0.16  Score=32.62  Aligned_cols=24  Identities=17%  Similarity=0.289  Sum_probs=21.9

Q ss_pred             CCCcccCCCCCCCCChhHHhhhhh
Q 015261          180 FDPACCFMCDLPHDAIENCMVHMH  203 (410)
Q Consensus       180 i~p~~ClfC~~~f~~~~~~~~HM~  203 (410)
                      |.|+.|..|++.|-.......|..
T Consensus         3 iKPYeC~~C~KrFMWRDSF~RH~~   26 (44)
T d2csha2           3 IKPYECNICAKRFMWRDSFHRHVT   26 (44)
T ss_dssp             CCCEECSSSCCEESCHHHHHHHHH
T ss_pred             CCceeccchhhhhhhHHHHHHhhh
Confidence            689999999999999999888865

>d2eppa1 g.37.1.1 (A:286-338) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=84.75  E-value=0.22  Score=33.11  Aligned_cols=23  Identities=39%  Similarity=0.808  Sum_probs=20.6

Q ss_pred             cccccCcCCccCChHHHHHHHhh
Q 015261           66 TYSCGLCGKGYRSSKALAQHLNS   88 (410)
Q Consensus        66 ~~~C~~C~K~f~s~~~l~~Hl~s   88 (410)
                      .|.|-+|+|.|.....|++|-..
T Consensus         6 l~pCG~CgK~Ftd~~rLr~HEAQ   28 (53)
T d2eppa1           6 ILPCGLCGKVFTDANRLRQHEAQ   28 (53)
T ss_dssp             CCCCTTTCCCCSCHHHHHHHHHH
T ss_pred             eeeccccccccCCHHHHhHhHHh
Confidence            58899999999999999999754

>d2ctda2 g.37.1.1 (A:61-90) Zinc finger protein 512, ZNF512 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 512, ZNF512
species: Human (Homo sapiens) [TaxId: 9606]

Probab=84.59  E-value=0.32  Score=28.54  Aligned_cols=25  Identities=24%  Similarity=0.513  Sum_probs=23.1

Q ss_pred             CCcccccccccCChHHHhhhhhhcc
Q 015261            3 GLTCNSCNREFNDDAEQKLHYKSDW   27 (410)
Q Consensus         3 ~ftC~~C~~~F~~~~~qr~H~ksdw   27 (410)
                      .|||.-|+.+..+....+.|.-.|+
T Consensus         2 ~ftc~hcgkqlks~~gmkyhvmadh   26 (30)
T d2ctda2           2 MFTCHHCGKQLRSLAGMKYHVMANH   26 (30)
T ss_dssp             CCCCSSSCCCCSSHHHHHHHHHHHT
T ss_pred             ceechhHHHHHhhccCceEEEeecc
Confidence            5999999999999999999998883

>d1x6ha1 g.37.1.1 (A:44-80) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=84.38  E-value=0.25  Score=30.37  Aligned_cols=23  Identities=26%  Similarity=0.777  Sum_probs=19.7

Q ss_pred             CcccccCcCCccCChHHHHHHHh
Q 015261           65 MTYSCGLCGKGYRSSKALAQHLN   87 (410)
Q Consensus        65 ~~~~C~~C~K~f~s~~~l~~Hl~   87 (410)
                      ..|.|.-|+|+|..++++..|-.
T Consensus         3 ~afvcskcgktftrrntm~rha~   25 (37)
T d1x6ha1           3 AAFVCSKCGKTFTRRNTMARHAD   25 (37)
T ss_dssp             CCEECSSSCCEESCHHHHHHHHH
T ss_pred             ceeeecccccchhcchHHHHHhh
Confidence            46899999999999999887753

>d2ct1a1 g.37.1.1 (A:44-71) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=84.37  E-value=0.18  Score=29.16  Aligned_cols=25  Identities=28%  Similarity=0.376  Sum_probs=23.3

Q ss_pred             cccCCCCCCCCChhHHhhhhhhhhc
Q 015261          183 ACCFMCDLPHDAIENCMVHMHKCHG  207 (410)
Q Consensus       183 ~~ClfC~~~f~~~~~~~~HM~~~Hg  207 (410)
                      ++|+.|+......++|..||+.-|+
T Consensus         3 ~qcphc~tiiarksdlrvhlrnlhs   27 (28)
T d2ct1a1           3 FHCPHCDTVIARKSDLGVHLRKQHS   27 (28)
T ss_dssp             EECSSSSCEESSHHHHHHHHHHTSC
T ss_pred             ccCCcchhheeehhhhhHHhhhccc
Confidence            6899999999999999999998886

>d2glia4 g.37.1.1 (A:198-228) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=83.98  E-value=0.14  Score=30.71  Aligned_cols=27  Identities=19%  Similarity=0.413  Sum_probs=23.3

Q ss_pred             CCcccCC--CCCCCCChhHHhhhhhhhhc
Q 015261          181 DPACCFM--CDLPHDAIENCMVHMHKCHG  207 (410)
Q Consensus       181 ~p~~Clf--C~~~f~~~~~~~~HM~~~Hg  207 (410)
                      .|+.|.|  |.+.|+..++--+|....|+
T Consensus         1 kPY~C~~~gC~KafsNsSDraKHqnRTHs   29 (31)
T d2glia4           1 KPYMCEHEGCSKAFSNASDRAKHQNRTHS   29 (31)
T ss_dssp             CCEECCSTTCCCEESSSSTTHHHHHHTTC
T ss_pred             CCccccCCChhhhhcchhhhhhhcccccc
Confidence            3789999  99999999999999855565

>d1bhia_ g.37.1.1 (A:) Transactivation domain of cre-bp1/atf-2 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transactivation domain of cre-bp1/atf-2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=83.64  E-value=0.17  Score=32.02  Aligned_cols=30  Identities=23%  Similarity=0.625  Sum_probs=25.0

Q ss_pred             CCCcccc--cccccCChHHHhhhhhhccccchhh
Q 015261            2 PGLTCNS--CNREFNDDAEQKLHYKSDWHRYNLK   33 (410)
Q Consensus         2 ~~ftC~~--C~~~F~~~~~qr~H~ksdwHrYNlK   33 (410)
                      .||.|.+  |+..|.+.+.|-.|-+-  |.-+||
T Consensus         5 kPF~C~~pGC~q~F~neDhL~vHk~K--H~m~Lk   36 (38)
T d1bhia_           5 KPFLCTAPGCGQRFTNEDHLAVHKHK--HEMTLK   36 (38)
T ss_dssp             CCEECCCTTTCCEESSHHHHHHHHHH--HHTTTT
T ss_pred             CceecCCCCccccccchHHHHHhhhh--heeeec
Confidence            4899955  99999999999999987  765554

>d1ubdc2 g.37.1.1 (C:323-350) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=82.85  E-value=0.29  Score=28.38  Aligned_cols=24  Identities=17%  Similarity=0.443  Sum_probs=20.9

Q ss_pred             CccccccCCCCcccCCHHHHHHHHHhc
Q 015261          233 DFMCLYCNDRCHPFNSLEAVRKHMEAK  259 (410)
Q Consensus       233 ~~~Cl~C~~~gk~F~s~~alr~HM~~k  259 (410)
                      .+.|..||   |.|.....|+.|...+
T Consensus         2 ~hvc~ecg---kaf~essklkrh~lvh   25 (28)
T d1ubdc2           2 VHVCAECG---KAFVESSKLKRHQLVH   25 (28)
T ss_dssp             CEECTTTC---CEESSHHHHHHHGGGT
T ss_pred             cchHHHHh---HHHHHHHHHHHHhhcc
Confidence            47899999   9999999999997653

>d1x5wa2 g.37.1.1 (A:36-64) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=82.12  E-value=0.26  Score=28.96  Aligned_cols=25  Identities=20%  Similarity=0.357  Sum_probs=22.4

Q ss_pred             CCCcccccccccCChHHHhhhhhhc
Q 015261            2 PGLTCNSCNREFNDDAEQKLHYKSD   26 (410)
Q Consensus         2 ~~ftC~~C~~~F~~~~~qr~H~ksd   26 (410)
                      .||.|.+|.-.-..++.|-.|+|--
T Consensus         1 rPFkC~~CsFDtkq~SnL~kH~kk~   25 (29)
T d1x5wa2           1 RPFKCNYCSFDTKQPSNLSKHMKKF   25 (29)
T ss_dssp             CSEECSSSSCEESSHHHHHHHHHHH
T ss_pred             CCcccceecccccCcchHHHHHHHH
Confidence            4899999999999999999999863

>d2ct1a1 g.37.1.1 (A:44-71) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=81.71  E-value=0.34  Score=27.99  Aligned_cols=27  Identities=19%  Similarity=0.614  Sum_probs=23.9

Q ss_pred             CCcccccccccCChHHHhhhhhhccccc
Q 015261            3 GLTCNSCNREFNDDAEQKLHYKSDWHRY   30 (410)
Q Consensus         3 ~ftC~~C~~~F~~~~~qr~H~ksdwHrY   30 (410)
                      .|.|.-|.......+++|.|++.- |.|
T Consensus         2 k~qcphc~tiiarksdlrvhlrnl-hsy   28 (28)
T d2ct1a1           2 KFHCPHCDTVIARKSDLGVHLRKQ-HSY   28 (28)
T ss_dssp             SEECSSSSCEESSHHHHHHHHHHT-SCC
T ss_pred             CccCCcchhheeehhhhhHHhhhc-ccC
Confidence            588999999999999999999974 655

>d2drpa1 g.37.1.1 (A:103-139) Tramtrack protein (two zinc-finger peptide) {Drosophila melanogaster [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Tramtrack protein (two zinc-finger peptide)
species: Drosophila melanogaster [TaxId: 7227]

Probab=81.28  E-value=0.24  Score=30.53  Aligned_cols=30  Identities=27%  Similarity=0.574  Sum_probs=26.0

Q ss_pred             CCcccccccccCChHHHhhhhhhccccchhh
Q 015261            3 GLTCNSCNREFNDDAEQKLHYKSDWHRYNLK   33 (410)
Q Consensus         3 ~ftC~~C~~~F~~~~~qr~H~ksdwHrYNlK   33 (410)
                      .|.|+.|...+...+.+-.||-+. |.-|+|
T Consensus         8 ~yRC~~C~r~YTHISNFCRHyvtS-Hk~nvk   37 (37)
T d2drpa1           8 TYRCKVCSRVYTHISNFCRHYVTS-HKRNVK   37 (37)
T ss_dssp             EEECTTTCCEESSHHHHHHHHHHH-SSSSCC
T ss_pred             EEEeehhhHHHHHHHHHHHHHHhh-cccCCC
Confidence            489999999999999999999997 655553

>d2epra1 g.37.1.1 (A:350-384) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=80.92  E-value=0.52  Score=28.60  Aligned_cols=22  Identities=27%  Similarity=0.504  Sum_probs=19.7

Q ss_pred             CcccccccccCChHHHhhhhhh
Q 015261            4 LTCNSCNREFNDDAEQKLHYKS   25 (410)
Q Consensus         4 ftC~~C~~~F~~~~~qr~H~ks   25 (410)
                      ..|..||.+|.+.-.|..|--|
T Consensus         6 ~~ce~cgk~frdvyhlnrhkls   27 (35)
T d2epra1           6 VACEICGKIFRDVYHLNRHKLS   27 (35)
T ss_dssp             EEETTTTEEESSHHHHHHHGGG
T ss_pred             hhHHHHHHHHHHHHHHHhhhcc
Confidence            4699999999999988888887

>d2ctda2 g.37.1.1 (A:61-90) Zinc finger protein 512, ZNF512 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 512, ZNF512
species: Human (Homo sapiens) [TaxId: 9606]

Probab=80.44  E-value=0.79  Score=26.79  Aligned_cols=25  Identities=28%  Similarity=0.603  Sum_probs=20.4

Q ss_pred             CccccccCCCCcccCCHHHHHHH-HHhcC
Q 015261          233 DFMCLYCNDRCHPFNSLEAVRKH-MEAKR  260 (410)
Q Consensus       233 ~~~Cl~C~~~gk~F~s~~alr~H-M~~k~  260 (410)
                      -+.|-.|+   |...|+..++-| |.++.
T Consensus         2 ~ftc~hcg---kqlks~~gmkyhvmadhn   27 (30)
T d2ctda2           2 MFTCHHCG---KQLRSLAGMKYHVMANHN   27 (30)
T ss_dssp             CCCCSSSC---CCCSSHHHHHHHHHHHTC
T ss_pred             ceechhHH---HHHhhccCceEEEeeccc
Confidence            36899999   899999999999 44443

>d2dlqa2 g.37.1.1 (A:35-62) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=80.06  E-value=0.53  Score=27.07  Aligned_cols=22  Identities=32%  Similarity=0.687  Sum_probs=18.4

Q ss_pred             cccccCcCCccCChHHHHHHHh
Q 015261           66 TYSCGLCGKGYRSSKALAQHLN   87 (410)
Q Consensus        66 ~~~C~~C~K~f~s~~~l~~Hl~   87 (410)
                      +|.|.-|+|.|-.+..|.+|-.
T Consensus         1 pf~c~kcgkcyfrkenllehea   22 (28)
T d2dlqa2           1 PFECPKCGKCYFRKENLLEHEA   22 (28)
T ss_dssp             SCBCTTTCCBCSSHHHHHHHHH
T ss_pred             CCccccchhhhhhHhHHHHHHH
Confidence            5789999999888888888753