Citrus Sinensis ID: 015460

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400------
Protein Sequence
MGKKKKRVSSKVWCYYCDREFDDEKILVQHQKAKHFKCHVCHKKLSTAGGMAIHVLQVHKENVTKVPNAKPGRESTDIEIYGMQGIPPDVLAAHYGEEEEVPSKMAKVDTSFPQLVGGVVPGQLGVSYPPQSTLGMMQPIYSSAVPVPPAGWPVPPRPQPWYPQHAAVSIPPPAAVGYAQQPLFPVQNVRPPLASSTSPALQPSPVVPPGMPSSTPPVTVSQPLFPVVNNNTTSQSSLFSAPIPSTSIALSSSAEIKGSVDAHSSANTSVTNSYHVPSMQGGTLSNSHSYASGPNTGGPSIGPPPVIANKAPATQPAVNEVYLVWEDEAMSMEERRMSSVKYQVHDETSQVSYNYLFKIWSWFVFSNQMDRPYVSCFQISCLRFVTYLERYFLYEFQFFFFLIFTK
Secondary Structure (PSIPRED)
ccccccccccccEEEEcccccccHHHHHHHHcccccccccccccccccccHHHHHHHHcccccccccccccccccccEEEEccccccHHHHHccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccEEEEEccccccHHHHHHccccccccccccHHHHHHHccEEEEEEEEccccccEEEEEEEEHHHHHHHHHHHHHHHHHHHHEEEccc
Secondary Structure Prediction (SSPRO)
ccccccccccccEEEEccccccHHHHHHHHHHHcccccccccccccccccHEEEHHHHHHccHcccccccccccccEEEEEccccccHHHHHHHHccccccHHHHccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccEEEEEcccccccHHHHHHccccccEccccHHHHHHHHHHHHEEEEEcccccccccEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHcc
Coil and Loop (DISEMBL)
mgkkkkrvssKVWCYycdrefddEKILVQHQKakhfkchvchkklstaggMAIHVLQVHKenvtkvpnakpgrestdieiygmqgippdvlaahygeeeevpskmakvdtsfpqlvggvvpgqlgvsyppqstlgmmqpiyssavpvppagwpvpprpqpwypqhaavsipppaavgyaqqplfpvqnvrpplasstspalqpspvvppgmpsstppvtvsqplfpvvnnnttsqsslfsapipstsialsssaeikgsvdahssantsvtnsyhvpsmqggtlsnshsyasgpntggpsigpppviankapatqpavnEVYLVWEDEAMSMEERRMSSVkyqvhdetsqVSYNYLFKIWSWFvfsnqmdrpyvscfqiSCLRFVTYLERYFLYEFQFFFFLIFTK
Flexible Loop (DISEMBL)
mgkkkkrvsskvWCYYCDREFDDEKILVQHQKAKHFKCHVCHKKLSTAGGMAIHVLQVHkenvtkvpnakpgrESTDIEIYGMQGIPPDVLAAHYGEEEEVPSKMAKVDTSFPQLVGGVVPGQLGVSYPPQSTLGMMQPIYSSAVPVPPAGWPVPPRPQPWYPQHAAVSIPPPAAVGYAQQPLFPVQNVRPPLASSTSPALQPSPVVPPGMPSSTPPVTVSQPLFPVVNNNTTSQSSLFSAPIPSTSIALSSSAEIKGSVDAHSSANTSVTNSYHVPSMQGGTLSNSHSYASGPNTGGPSIGPPPVIANKAPATQPAVNEVYLVWEDEAMSMEERRMSSVKYQVHDETSQVSYNYLFKIWSWFVFSNQMDRPYVSCFQISCLRFVTYLERYFLYEFQFFFFLIFTK
Low Complexity Region (SEG)
MGKKKKRVSSKVWCYYCDREFDDEKILVQHQKAKHFKCHVCHKKLSTAGGMAIHVLQVHKENVTKVPNAKPGRESTDIEIYGMQGIPPDVLAAHYGEEEEVPSKMAKVDTSFpqlvggvvpgqlgvSYPPQSTLGMMQPIYSSavpvppagwpvpprpqpwypqHAAVSIPPPAAVGYAQQPLFPVQNVRPPLASSTSPALqpspvvppgmpsstppvtvsqpLFPVVNNNTTSQSSLFSAPIPSTSIALSSSAEIKGSVDAHSSANTSVTNSYHVPSMQGGTLSNSHSYASGPNTGGPSIGPPPVIANKAPATQPAVNEVYLVWEDEAMSMEERRMSSVKYQVHDETSQVSYNYLFKIWSWFVFSNQMDRPYVSCFQISCLRFVTyleryflyefqfffflifTK
Disordered region (IsUnstruct)
**********KVWCYYCDREFDDEKILVQHQKAKHFKCHVCHKKLSTAGGMAIHVLQVHKENVT*************IEIYGMQGIPPDVLAAHY***************SFPQLVGGVVPGQLGVSYP***TLGMMQPIYSSAVPV***GW********WYPQHAAVSIP**AAVGYAQ**L*************************************************************************************************************************************AVNEVYLVWED**************YQVHDETSQVSYNYLFKIWSWFVFSNQMDRPYVSCFQISCLRFVTYLERYFLYEFQFFFFLIF**
Disordered Region (DISOPRED)
*********SKVWCYYCDREFDDEKILVQHQKAKHFKCHVCHKKLSTAGGMAIHVLQVHKEN***************IEIY**************************************************************************************************************************************************************************************************************************************************VWEDEAMSMEERRMSSVKYQVHDETSQVSYNYLFKIWSWFVFSNQMDRPYVSCFQISCLRFVTYLERYFLYEFQFFFFLIFTK
Disordered Region (DISEMBL)
**********KVWCYYCDREFDDEKILVQHQKAKHFKCHVCHKKLSTAGGMAIHVLQVHKENVTKVPNAKPGRESTDIEIYGMQGIPPDVLAAHYGEEEEVPSKMAKVDTSFPQLVGGVVPGQLGVSYPPQSTLGMMQPIYSSAVPVPPAGWPVPPRPQPWYPQHAAVSIPPPAAVGYAQQPLFPVQNVR************PSPVVPPGMPSSTPPVTVSQPLFPVVNNNTTSQSSLFSAPIPSTSIALSSSAEIKGSVDAHSSANTSVTNSYHVPSMQGGTLSNSHSYASGPNTGGPSIGPPPVIANKAPATQPAVNEVYLVWEDEAMSMEERRMSSVKYQVHDETSQVSYNYLFKIWSWFVFSNQMDRPYVSCFQISCLRFVTYLERYFLYEFQFFFFLIFTK
Disordered Region (DISPRO)
********SSKVWCYYCDREFDDEKILVQHQKAKHFKCHVCHKKLSTAGGMAIHVLQVHKENVTKVPNAKPGRESTDIEIYGMQGIPPDVLAAHYG*****************************VSYPPQSTLGMMQPIYSSAVPVPPAGWPVPPRPQPWYPQHAAVSIPPPAAVGYAQQPLFPVQNVRPPLASSTSPALQPSPVVPPGMPSSTPPVTVSQPLFPVVNNNTTSQSSLFS*****************************************************************************VNEVYLVWEDEAMSMEERRMSSVKYQVHDETSQVSYNYLFKIWSWFVFSNQMDRPYVSCFQISCLRFVTYLERYFLYEFQFFFFLIFTK
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHooo
TM Helix, Signal Peptide (Phobius)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MGKKKKRVSSKVWCYYCDREFDDEKILVQHQKAKHFKCHVCHKKLSTAGGMAIHVLQVHKENVTKVPNAKPGRESTDIEIYGMQGIPPDVLAAHYGEEEEVPSKMAKVDTSFPQLVGGVVPGQLGVSYPPQSTLGMMQPIYSSAVPVPPAGWPVPPRPQPWYPQHAAVSIPPPAAVGYAQQPLFPVQNVRPPLASSTSPALQPSPVVPPGMPSSTPPVTVSQPLFPVVNNNTTSQSSLFSAPIPSTSIALSSSAEIKGSVDAHSSANTSVTNSYHVPSMQGGTLSNSHSYASGPNTGGPSIGPPPVIANKAPATQPAVNEVYLVWEDEAMSMEERRMSSVKYQVHDETSQVSYNYLFKIWSWFVFSNQMDRPYVSCFQISCLRFVTYLERYFLYEFQFFFFLIFTK
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	406	2.2.26 [Sep-21-2011]
O43670	478	Zinc finger protein 207 O	yes	no	0.211	0.179	0.678	4e-33
Q5R8K4	494	Zinc finger protein 207 O	yes	no	0.211	0.174	0.678	2e-32

>sp|O43670|ZN207_HUMAN Zinc finger protein 207 OS=Homo sapiens GN=ZNF207 PE=1 SV=1

 Score =  142 bits (358), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 59/87 (67%), Positives = 72/87 (82%), Gaps = 1/87 (1%)

Query: 1  MGKKKKRVSSKVWCYYCDREFDDEKILVQHQKAKHFKCHVCHKKLSTAGGMAIHVLQVHK 60
          MG+KKK+   K WC+YC+R+FDDEKIL+QHQKAKHFKCH+CHKKL T  G+AIH +QVHK
Sbjct: 1  MGRKKKK-QLKPWCWYCNRDFDDEKILIQHQKAKHFKCHICHKKLYTGPGLAIHCMQVHK 59

Query: 61 ENVTKVPNAKPGRESTDIEIYGMQGIP 87
          E +  VPNA PGR   ++EIYGM+GIP
Sbjct: 60 ETIDAVPNAIPGRTDIELEIYGMEGIP 86

Homo sapiens (taxid: 9606)

>sp|Q5R8K4|ZN207_PONAB Zinc finger protein 207 OS=Pongo abelii GN=ZNF207 PE=2 SV=1

 Score =  140 bits (354), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 59/87 (67%), Positives = 71/87 (81%), Gaps = 1/87 (1%)

Query: 1  MGKKKKRVSSKVWCYYCDREFDDEKILVQHQKAKHFKCHVCHKKLSTAGGMAIHVLQVHK 60
          MG+KKK+   K WC+YC+R+FDDEKIL QHQKAKHFKCH+CHKKL T  G+AIH +QVHK
Sbjct: 1  MGRKKKK-QLKPWCWYCNRDFDDEKILTQHQKAKHFKCHICHKKLYTGPGLAIHCMQVHK 59

Query: 61 ENVTKVPNAKPGRESTDIEIYGMQGIP 87
          E +  VPNA PGR   ++EIYGM+GIP
Sbjct: 60 ETIDAVPNAIPGRTDIELEIYGMEGIP 86

Pongo abelii (taxid: 9601)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	406
224074127	385	predicted protein [Populus trichocarpa]	0.854	0.901	0.742	1e-145
357521469	465	Zinc finger protein [Medicago truncatula	0.955	0.834	0.686	1e-141
357521467	374	Zinc finger protein [Medicago truncatula	0.849	0.922	0.730	1e-135
297738020	375	unnamed protein product [Vitis vinifera]	0.864	0.936	0.726	1e-134
356524640	371	PREDICTED: uncharacterized protein LOC10	0.854	0.935	0.752	1e-132
225423609	362	PREDICTED: uncharacterized protein LOC10	0.832	0.933	0.707	1e-130
356513020	371	PREDICTED: uncharacterized protein LOC10	0.854	0.935	0.738	1e-129
224138544	363	predicted protein [Populus trichocarpa]	0.837	0.936	0.740	1e-128
356524642	359	PREDICTED: uncharacterized protein LOC10	0.827	0.935	0.740	1e-126
449433517	372	PREDICTED: uncharacterized protein LOC10	0.859	0.938	0.742	1e-126

>gi|224074127|ref|XP_002304263.1| predicted protein [Populus trichocarpa] gi|222841695|gb|EEE79242.1| predicted protein [Populus trichocarpa]

 Score =  522 bits (1345), Expect = e-145,   Method: Compositional matrix adjust.
 Identities = 274/369 (74%), Positives = 295/369 (79%), Gaps = 22/369 (5%)

Query: 1   MGKKKKRVSSKVWCYYCDREFDDEKILVQHQKAKHFKCHVCHKKLSTAGGMAIHVLQVHK 60
           MGKKKKR +SKVWCYYCDREFDDEKILVQHQKAKHFKCHVCHKKLSTAGGMAIHVLQVHK
Sbjct: 1   MGKKKKRAASKVWCYYCDREFDDEKILVQHQKAKHFKCHVCHKKLSTAGGMAIHVLQVHK 60

Query: 61  ENVTKVPNAKPGRESTDIEIYGMQGIPPDVLAAHYGEEE-EVPSKMAKVDTSFPQLVGGV 119
           E+VTKVPNAKPGRESTDIEIYGMQGIPPDVLAAHYGEEE E PSK AKVD    QLVGG+
Sbjct: 61  ESVTKVPNAKPGRESTDIEIYGMQGIPPDVLAAHYGEEEDENPSKAAKVDIPSAQLVGGM 120

Query: 120 VPGQLGVSYPPQSTLGMMQP---------------IYSSAVPVPPAGWPVPPRPQPWYPQ 164
           VPG LG  YPP+  L  MQP               +Y+SAVP P AGWPVPPR Q W PQ
Sbjct: 121 VPGPLGAGYPPRP-LAAMQPMSGPCTLGPVKLWNYLYNSAVPAPHAGWPVPPRSQHWLPQ 179

Query: 165 HAAVSIPPPAAVGYAQQPLFPVQNVRPPLASSTSPALQPSPVVPPGMPSSTPPVTVSQPL 224
           H AVSIPPPA + Y QQPLFPVQNVRPP+ S+ +PAL PS V PPG+PSSTP  +VSQPL
Sbjct: 180 HPAVSIPPPAPITYTQQPLFPVQNVRPPVPSTMTPALIPSQVTPPGLPSSTP--SVSQPL 237

Query: 225 FPVVNNNTTSQSSLFSAPIPSTSIALSSSAEIKGSVDAHSSANTSVTNSYHVPSMQG-GT 283
           FPV  NN   QSS FSAP PSTS+  SS AE++GS++ H   NTS+T  Y   S    GT
Sbjct: 238 FPV--NNNLPQSSTFSAPFPSTSLLPSSPAEVRGSMNVHLGVNTSMTTGYLTQSASASGT 295

Query: 284 LSNSHSYASGPNTGGPSIGPPPVIANKAPATQPAVNEVYLVWEDEAMSMEERRMSSVKYQ 343
           L N+HSYASGPNTGGPSIGPPPVIANKAP  QPAVNEVYLVW+DEAMSMEERRMS  KYQ
Sbjct: 296 LGNTHSYASGPNTGGPSIGPPPVIANKAPVIQPAVNEVYLVWDDEAMSMEERRMSLPKYQ 355

Query: 344 VHDETSQVS 352
           VHDETSQ+S
Sbjct: 356 VHDETSQMS 364

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357521469|ref|XP_003631023.1| Zinc finger protein [Medicago truncatula] gi|355525045|gb|AET05499.1| Zinc finger protein [Medicago truncatula]

 Score =  509 bits (1311), Expect = e-141,   Method: Compositional matrix adjust.
 Identities = 280/408 (68%), Positives = 315/408 (77%), Gaps = 20/408 (4%)

Query: 1   MGKKKKRVSSKVWCYYCDREFDDEKILVQHQKAKHFKCHVCHKKLSTAGGMAIHVLQVHK 60
           MG+KKKRV+SKVWCYYCDREFDDEKILVQHQKAKHFKCHVCHKKLSTAGGM+IHVLQVHK
Sbjct: 1   MGRKKKRVASKVWCYYCDREFDDEKILVQHQKAKHFKCHVCHKKLSTAGGMSIHVLQVHK 60

Query: 61  ENVTKVPNAKPGRESTDIEIYGMQGIPPDVLAAHYG-EEEEVPSKMAKVDTSFPQLVGGV 119
           ENVTKVPNAKPGREST+IEIYGMQGIPPDVLAAHYG E+++VPSK AKVD       GG+
Sbjct: 61  ENVTKVPNAKPGRESTEIEIYGMQGIPPDVLAAHYGDEDDDVPSKTAKVDIPSTPFAGGM 120

Query: 120 VPGQLGVSYPPQSTLGMMQPIYSSAVPVPPAGWP-VPPRPQPWYPQHAAVSIPPPAAVGY 178
           VP  +G  YPP+ST+G ++PIY+ AVP PP  W  VPPRPQPW+PQ   VS+  P  V Y
Sbjct: 121 VPPPMGTGYPPRSTMGPIRPIYNPAVPGPPNAWGVVPPRPQPWFPQPPTVSM--PPPVQY 178

Query: 179 AQQPLFPVQNVRPPLASSTSPALQPSPVVPPGMPSSTPPVTVSQPLFPVV-NNNTTSQSS 237
            QQPLFPVQNVRPPL S+TSPALQ S + PPG+PSSTPPV VSQPLFPVV NN+  +QSS
Sbjct: 179 PQQPLFPVQNVRPPLPSTTSPALQ-SQITPPGLPSSTPPVPVSQPLFPVVGNNHMATQSS 237

Query: 238 LFSAP-----IPSTSIALSSSAEIKGSVDAHSSANTSVTNSYHVPSMQGGTLSNSHSYAS 292
            FSA      +PS +  LSS+  I    DAH   N+SVT+SY    + GG  SNSHSYAS
Sbjct: 238 PFSAAPMSSSVPSITPGLSSNVPI----DAHLGINSSVTSSYQAIGIPGGIASNSHSYAS 293

Query: 293 GPNTGGPSIGPPPVIANKAPATQPAVNEVYLVWEDEAMSMEERRMSSVKYQVHDETSQVS 352
           GPNTGGPSIGPPPVI+NKAPATQPA NEVYLVW+DEAMSMEERRMS  KYQVHDE+SQVS
Sbjct: 294 GPNTGGPSIGPPPVISNKAPATQPATNEVYLVWDDEAMSMEERRMSLTKYQVHDESSQVS 353

Query: 353 YNYLFKIWSWFVFSNQMDRPYVSCFQISCLRFVTYLER-YFLYEFQFF 399
                 +   F  SNQM R Y  CFQI   +  T+++R  F    Q F
Sbjct: 354 RTTFLLLGVAFT-SNQMSRLYAFCFQI---QLFTHIKRGTFCISLQSF 397

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357521467|ref|XP_003631022.1| Zinc finger protein [Medicago truncatula] gi|355525044|gb|AET05498.1| Zinc finger protein [Medicago truncatula]

 Score =  489 bits (1259), Expect = e-135,   Method: Compositional matrix adjust.
 Identities = 263/360 (73%), Positives = 294/360 (81%), Gaps = 15/360 (4%)

Query: 1   MGKKKKRVSSKVWCYYCDREFDDEKILVQHQKAKHFKCHVCHKKLSTAGGMAIHVLQVHK 60
           MG+KKKRV+SKVWCYYCDREFDDEKILVQHQKAKHFKCHVCHKKLSTAGGM+IHVLQVHK
Sbjct: 1   MGRKKKRVASKVWCYYCDREFDDEKILVQHQKAKHFKCHVCHKKLSTAGGMSIHVLQVHK 60

Query: 61  ENVTKVPNAKPGRESTDIEIYGMQGIPPDVLAAHYG-EEEEVPSKMAKVDTSFPQLVGGV 119
           ENVTKVPNAKPGREST+IEIYGMQGIPPDVLAAHYG E+++VPSK AKVD       GG+
Sbjct: 61  ENVTKVPNAKPGRESTEIEIYGMQGIPPDVLAAHYGDEDDDVPSKTAKVDIPSTPFAGGM 120

Query: 120 VPGQLGVSYPPQSTLGMMQPIYSSAVPVPPAGWP-VPPRPQPWYPQHAAVSIPPPAAVGY 178
           VP  +G  YPP+ST+G ++PIY+ AVP PP  W  VPPRPQPW+PQ   VS+  P  V Y
Sbjct: 121 VPPPMGTGYPPRSTMGPIRPIYNPAVPGPPNAWGVVPPRPQPWFPQPPTVSM--PPPVQY 178

Query: 179 AQQPLFPVQNVRPPLASSTSPALQPSPVVPPGMPSSTPPVTVSQPLFPVV-NNNTTSQSS 237
            QQPLFPVQNVRPPL S+TSPALQ S + PPG+PSSTPPV VSQPLFPVV NN+  +QSS
Sbjct: 179 PQQPLFPVQNVRPPLPSTTSPALQ-SQITPPGLPSSTPPVPVSQPLFPVVGNNHMATQSS 237

Query: 238 LFSAP-----IPSTSIALSSSAEIKGSVDAHSSANTSVTNSYHVPSMQGGTLSNSHSYAS 292
            FSA      +PS +  LSS+  I    DAH   N+SVT+SY    + GG  SNSHSYAS
Sbjct: 238 PFSAAPMSSSVPSITPGLSSNVPI----DAHLGINSSVTSSYQAIGIPGGIASNSHSYAS 293

Query: 293 GPNTGGPSIGPPPVIANKAPATQPAVNEVYLVWEDEAMSMEERRMSSVKYQVHDETSQVS 352
           GPNTGGPSIGPPPVI+NKAPATQPA NEVYLVW+DEAMSMEERRMS  KYQVHDE+SQ+S
Sbjct: 294 GPNTGGPSIGPPPVISNKAPATQPATNEVYLVWDDEAMSMEERRMSLTKYQVHDESSQMS 353

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297738020|emb|CBI27221.3| unnamed protein product [Vitis vinifera]

 Score =  484 bits (1245), Expect = e-134,   Method: Compositional matrix adjust.
 Identities = 258/355 (72%), Positives = 296/355 (83%), Gaps = 4/355 (1%)

Query: 1   MGKKKKRVSSKVWCYYCDREFDDEKILVQHQKAKHFKCHVCHKKLSTAGGMAIHVLQVHK 60
           MGKKKKRV++KVWCYYCDREF+DEKILVQHQKAKHFKCHVCHKKLSTAGGM IHVLQVHK
Sbjct: 1   MGKKKKRVAAKVWCYYCDREFEDEKILVQHQKAKHFKCHVCHKKLSTAGGMVIHVLQVHK 60

Query: 61  ENVTKVPNAKPGRESTDIEIYGMQGIPPDVLAAHYGEE-EEVPSKMAKVDTSFPQLVGGV 119
           E V+KVPNAKPGREST+IEIYGM+GIP ++LAAHYGEE E+VPSK+AKV+    QL GG 
Sbjct: 61  ETVSKVPNAKPGRESTEIEIYGMEGIPHEILAAHYGEEDEDVPSKLAKVEIPSSQLGGGA 120

Query: 120 VPGQLGVSYPPQSTLGMMQPIYSSAVPVPPAGWPVPPRPQPWYPQHAAVSIPPPAAVGYA 179
           VPG LG+  PPQ  LG M P+Y+ A+ VPPAGWPVP RPQPWY QH A+SI PPA +G  
Sbjct: 121 VPGTLGIGVPPQPALGAMPPVYNPALAVPPAGWPVPARPQPWYSQHPAISI-PPAPLGMT 179

Query: 180 QQPLFPVQNVRPPLASSTSPALQPS-PVVPPGMPSSTPPVTVSQPLFPV-VNNNTTSQSS 237
           QQPLFP+Q V+PPL S+ S ALQPS  + PPG+P  +P   + QPLFPV VNNN  +++S
Sbjct: 180 QQPLFPIQPVKPPLPSTMSSALQPSLQITPPGLPIPSPSAPLPQPLFPVGVNNNLPTKNS 239

Query: 238 LFSAPIPSTSIALSSSAEIKGSVDAHSSANTSVTNSYHVPSMQGGTLSNSHSYASGPNTG 297
            FS P+ STSI LSS AE+  S++AHSS N+S+ +SY  PS+QGG   NSHSYASGPNTG
Sbjct: 240 PFSTPMLSTSIPLSSQAELNSSIEAHSSTNSSLASSYSAPSIQGGPSINSHSYASGPNTG 299

Query: 298 GPSIGPPPVIANKAPATQPAVNEVYLVWEDEAMSMEERRMSSVKYQVHDETSQVS 352
           GPSIGPPPVIANK PATQPA NEVYLVW+DEAMSMEERRMS +KYQVHDETSQ+S
Sbjct: 300 GPSIGPPPVIANKVPATQPAGNEVYLVWDDEAMSMEERRMSLMKYQVHDETSQMS 354

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356524640|ref|XP_003530936.1| PREDICTED: uncharacterized protein LOC100819009 isoform 1 [Glycine max]

 Score =  477 bits (1227), Expect = e-132,   Method: Compositional matrix adjust.
 Identities = 267/355 (75%), Positives = 297/355 (83%), Gaps = 8/355 (2%)

Query: 1   MGKKKKRVSSKVWCYYCDREFDDEKILVQHQKAKHFKCHVCHKKLSTAGGMAIHVLQVHK 60
           MGKKKKRVSSKVWCYYCDREFDDEKILVQHQKAKHFKCHVCHKKLSTAGGMAIHVLQVHK
Sbjct: 1   MGKKKKRVSSKVWCYYCDREFDDEKILVQHQKAKHFKCHVCHKKLSTAGGMAIHVLQVHK 60

Query: 61  ENVTKVPNAKPGRESTDIEIYGMQGIPPDVLAAHYGEEE-EVPSKMAKVDTSFPQLVGGV 119
           E+VTKVPNAKPGRESTDIEIYGMQGIPPD+LAAHYGEEE +VPSK AKVD    QLVGG+
Sbjct: 61  ESVTKVPNAKPGRESTDIEIYGMQGIPPDILAAHYGEEEDDVPSKAAKVDIPPTQLVGGM 120

Query: 120 VPGQLGVSYPPQSTLGMMQPIYSSAVPVPPAGWPVPPRPQPWYPQHAAVSIPPPAAVGYA 179
           +P  LG  YPP+ TL  M P+Y+ AVPVPP  W VPPRPQPW+ Q  AVS+PP  A  Y 
Sbjct: 121 IPPPLGTGYPPRPTLPTMPPMYNPAVPVPPNAWMVPPRPQPWFSQPPAVSVPP--AAPYT 178

Query: 180 QQPLFPVQNVRPPLASSTSPALQPSPVVPPGMPSSTPPVTVSQPLFPVV-NNNTTSQSSL 238
           QQPLFPVQNVRPPL  +T+PALQ + + PPG+P+S  PV VSQPLFPVV NN+TT+QSS 
Sbjct: 179 QQPLFPVQNVRPPL-PATAPALQ-TQITPPGLPTSA-PVPVSQPLFPVVGNNHTTTQSST 235

Query: 239 FSA-PIPSTSIALSSSAEIKGSVDAHSSANTSVTNSYHVPSMQGGTLSNSHSYASGPNTG 297
           FSA P+PS+  +++S       VD H S+N+SVT+SY    + GG  SNSHSYASGPNTG
Sbjct: 236 FSAPPLPSSVPSVTSVMSANVPVDTHLSSNSSVTSSYQAIGIPGGAASNSHSYASGPNTG 295

Query: 298 GPSIGPPPVIANKAPATQPAVNEVYLVWEDEAMSMEERRMSSVKYQVHDETSQVS 352
           GPSIGPPPVIANKAPATQPA NEVYLVW+DEAMSMEERRMS  KYQVHDE+SQ+S
Sbjct: 296 GPSIGPPPVIANKAPATQPATNEVYLVWDDEAMSMEERRMSLPKYQVHDESSQMS 350

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225423609|ref|XP_002274291.1| PREDICTED: uncharacterized protein LOC100266425 [Vitis vinifera]

 Score =  472 bits (1214), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 251/355 (70%), Positives = 286/355 (80%), Gaps = 17/355 (4%)

Query: 1   MGKKKKRVSSKVWCYYCDREFDDEKILVQHQKAKHFKCHVCHKKLSTAGGMAIHVLQVHK 60
           MGKKKKRV++KVWCYYCDREF+DEKILVQHQKAKHFKCHVCHKKLSTAGGM IHVLQVHK
Sbjct: 1   MGKKKKRVAAKVWCYYCDREFEDEKILVQHQKAKHFKCHVCHKKLSTAGGMVIHVLQVHK 60

Query: 61  ENVTKVPNAKPGRESTDIEIYGMQGIPPDVLAAHYGEE-EEVPSKMAKVDTSFPQLVGGV 119
           E V+KVPNAKPGREST+IEIYGM+GIP ++LAAHYGEE E+VPSK+AKV+    QL GG 
Sbjct: 61  ETVSKVPNAKPGRESTEIEIYGMEGIPHEILAAHYGEEDEDVPSKLAKVEIPSSQLGGGA 120

Query: 120 VPGQLGVSYPPQSTLGMMQPIYSSAVPVPPAGWPVPPRPQPWYPQHAAVSIPPPAAVGYA 179
           VPG LG+  PPQ  LG M P+Y+ A+ VPPAGWPVP RPQPWY QH A+SI PPA +G  
Sbjct: 121 VPGTLGIGVPPQPALGAMPPVYNPALAVPPAGWPVPARPQPWYSQHPAISI-PPAPLGMT 179

Query: 180 QQPLFPVQNVRPPLASSTSPALQPS-PVVPPGMPSSTPPVTVSQPLFPV-VNNNTTSQSS 237
           QQPLFP+Q V+PPL S+ S ALQPS  + PPG+P  +P   + QPLFPV VNNN  +++S
Sbjct: 180 QQPLFPIQPVKPPLPSTMSSALQPSLQITPPGLPIPSPSAPLPQPLFPVGVNNNLPTKNS 239

Query: 238 LFSAPIPSTSIALSSSAEIKGSVDAHSSANTSVTNSYHVPSMQGGTLSNSHSYASGPNTG 297
            FS P+ STSI LSS AE+  S++AHSS N+             G   NSHSYASGPNTG
Sbjct: 240 PFSTPMLSTSIPLSSQAELNSSIEAHSSTNS-------------GPSINSHSYASGPNTG 286

Query: 298 GPSIGPPPVIANKAPATQPAVNEVYLVWEDEAMSMEERRMSSVKYQVHDETSQVS 352
           GPSIGPPPVIANK PATQPA NEVYLVW+DEAMSMEERRMS +KYQVHDETSQ+S
Sbjct: 287 GPSIGPPPVIANKVPATQPAGNEVYLVWDDEAMSMEERRMSLMKYQVHDETSQMS 341

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356513020|ref|XP_003525212.1| PREDICTED: uncharacterized protein LOC100789368 [Glycine max]

 Score =  466 bits (1200), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 262/355 (73%), Positives = 292/355 (82%), Gaps = 8/355 (2%)

Query: 1   MGKKKKRVSSKVWCYYCDREFDDEKILVQHQKAKHFKCHVCHKKLSTAGGMAIHVLQVHK 60
           MGKKKKRVSSKVWCYYCDREFDDEKILVQHQKAKHFKCHVCHKKLSTAGGMAIHVLQVHK
Sbjct: 1   MGKKKKRVSSKVWCYYCDREFDDEKILVQHQKAKHFKCHVCHKKLSTAGGMAIHVLQVHK 60

Query: 61  ENVTKVPNAKPGRESTDIEIYGMQGIPPDVLAAHYGEEE-EVPSKMAKVDTSFPQLVGGV 119
           E+VTKVPNAKPGRESTDIEIYGMQGIPPD+LAAHYGEEE +VPSK AKVD    QLVGG+
Sbjct: 61  ESVTKVPNAKPGRESTDIEIYGMQGIPPDILAAHYGEEEDDVPSKAAKVDIPPTQLVGGM 120

Query: 120 VPGQLGVSYPPQSTLGMMQPIYSSAVPVPPAGWPVPPRPQPWYPQHAAVSIPPPAAVGYA 179
           +P  LG  YP +  L  M P+Y+ AVPVPP  W VPPRPQPW+ Q   VS+PP  A  Y 
Sbjct: 121 IPPPLGTGYPSRPALPTMPPVYNPAVPVPPNAWVVPPRPQPWFSQPPVVSVPP--AAPYT 178

Query: 180 QQPLFPVQNVRPPLASSTSPALQPSPVVPPGMPSSTPPVTVSQPLFPVV-NNNTTSQSSL 238
           QQPLFPVQNVRPPL  +T+PALQ + + PPG+P+S  PV VSQPLFPVV NN+TT+QSS 
Sbjct: 179 QQPLFPVQNVRPPL-PATAPALQ-TQITPPGLPTSA-PVPVSQPLFPVVGNNHTTTQSSA 235

Query: 239 FSA-PIPSTSIALSSSAEIKGSVDAHSSANTSVTNSYHVPSMQGGTLSNSHSYASGPNTG 297
           FSA P+PS+  +++        VD H S+N+SVT+SY    + GG  SNSHSYASGPNTG
Sbjct: 236 FSAPPLPSSVPSVTPVMSTNVPVDTHLSSNSSVTSSYQAIGVPGGAASNSHSYASGPNTG 295

Query: 298 GPSIGPPPVIANKAPATQPAVNEVYLVWEDEAMSMEERRMSSVKYQVHDETSQVS 352
           GPSIGPPPVIANKAPA QPA NEVYLVW+DEAMSMEERRMS  KYQVHDE+SQ+S
Sbjct: 296 GPSIGPPPVIANKAPAPQPATNEVYLVWDDEAMSMEERRMSLPKYQVHDESSQMS 350

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224138544|ref|XP_002326629.1| predicted protein [Populus trichocarpa] gi|222833951|gb|EEE72428.1| predicted protein [Populus trichocarpa]

 Score =  464 bits (1193), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 262/354 (74%), Positives = 287/354 (81%), Gaps = 14/354 (3%)

Query: 1   MGKKKKRVSSKVWCYYCDREFDDEKILVQHQKAKHFKCHVCHKKLSTAGGMAIHVLQVHK 60
           MGKKKKRVSSKVWCYYCDREFDDEKILVQHQKAKHFKCHVCHKKLSTAGGMAIHVLQVHK
Sbjct: 1   MGKKKKRVSSKVWCYYCDREFDDEKILVQHQKAKHFKCHVCHKKLSTAGGMAIHVLQVHK 60

Query: 61  ENVTKVPNAKPGRESTDIEIYGMQGIPPDVLAAHYG-EEEEVPSKMAKVDTSFPQLVGGV 119
           E+VTKVPNAKPGRESTDIEIYGMQGIPPDVLA+HYG +E+E PSK AK D    Q +GG+
Sbjct: 61  ESVTKVPNAKPGRESTDIEIYGMQGIPPDVLASHYGDDEDETPSKAAKGDIPSAQRIGGM 120

Query: 120 VPGQLGVSYPPQSTLGMMQPIYSSAVPV-PPAGWPVPPRPQPWYPQHAAVSIPPPAAVGY 178
           +PG L   YPPQ  LG MQPI  + +P   P    +PPRPQPW+P H AVSI P A + Y
Sbjct: 121 MPGPLSTGYPPQP-LGAMQPIGPTLIPAYTPTKNEIPPRPQPWFPTHPAVSISPSAPIAY 179

Query: 179 AQQPLFPVQNVRPPLASSTSPALQPSPVVPPGMPSSTPPVTVSQPLFPVVNNNTTSQSSL 238
           AQQPLFPVQN+RPP+ S+TS AL PS   PPG+PSSTPP  VSQPLFPVVNNN   QSS 
Sbjct: 180 AQQPLFPVQNMRPPVPSTTSIALPPSQTPPPGLPSSTPP--VSQPLFPVVNNN-LPQSSP 236

Query: 239 FSAPIPSTSIALSSSAEIKGSVDAHSSANTSVTNSYHVPSMQGGTLSNSHSYASGPNTGG 298
           FSAP+P TSI+ SS  E+KGSV+ HS  N+S+T  Y           N+HSYASGPNTGG
Sbjct: 237 FSAPLPPTSISSSSPGEVKGSVNVHSGVNSSMTTGY--------LPGNTHSYASGPNTGG 288

Query: 299 PSIGPPPVIANKAPATQPAVNEVYLVWEDEAMSMEERRMSSVKYQVHDETSQVS 352
           PSIGPPPVIANKAPATQ AVNEVYLVW+DEAMSMEERRMS  KYQVHDETSQ+S
Sbjct: 289 PSIGPPPVIANKAPATQTAVNEVYLVWDDEAMSMEERRMSLPKYQVHDETSQMS 342

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356524642|ref|XP_003530937.1| PREDICTED: uncharacterized protein LOC100819009 isoform 2 [Glycine max]

 Score =  458 bits (1178), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 262/354 (74%), Positives = 287/354 (81%), Gaps = 18/354 (5%)

Query: 1   MGKKKKRVSSKVWCYYCDREFDDEKILVQHQKAKHFKCHVCHKKLSTAGGMAIHVLQVHK 60
           MGKKKKRVSSKVWCYYCDREFDDEKILVQHQKAKHFKCHVCHKKLSTAGGMAIHVLQVHK
Sbjct: 1   MGKKKKRVSSKVWCYYCDREFDDEKILVQHQKAKHFKCHVCHKKLSTAGGMAIHVLQVHK 60

Query: 61  ENVTKVPNAKPGRESTDIEIYGMQGIPPDVLAAHYGEEE-EVPSKMAKVDTSFPQLVGGV 119
           E+VTKVPNAKPGRESTDIEIYGMQGIPPD+LAAHYGEEE +VPSK AKVD    QLVGG+
Sbjct: 61  ESVTKVPNAKPGRESTDIEIYGMQGIPPDILAAHYGEEEDDVPSKAAKVDIPPTQLVGGM 120

Query: 120 VPGQLGVSYPPQSTLGMMQPIYSSAVPVPPAGWPVPPRPQPWYPQHAAVSIPPPAAVGYA 179
           +P  LG  YPP+ TL  M P+Y+ AVPVPP  W VPPRPQPW+ Q  AVS+PP  A  Y 
Sbjct: 121 IPPPLGTGYPPRPTLPTMPPMYNPAVPVPPNAWMVPPRPQPWFSQPPAVSVPP--AAPYT 178

Query: 180 QQPLFPVQNVRPPLASSTSPALQPSPVVPPGMPSSTPPVTVSQPLFPVV-NNNTTSQSSL 238
           QQPLFPVQNVRPPL  +T+PALQ + + PPG+P+S  PV VSQPLFPVV NN+TT+QSS 
Sbjct: 179 QQPLFPVQNVRPPL-PATAPALQ-TQITPPGLPTSA-PVPVSQPLFPVVGNNHTTTQSST 235

Query: 239 FSAPIPSTSIALSSSAEIKGSVDAHSSANTSVTNSYHVPSMQGGTLSNSHSYASGPNTGG 298
           FSAP   +S+          SV +  SAN  V    H+ S    T SNSHSYASGPNTGG
Sbjct: 236 FSAPPLPSSVP---------SVTSVMSANVPVDT--HLSSNSSVTTSNSHSYASGPNTGG 284

Query: 299 PSIGPPPVIANKAPATQPAVNEVYLVWEDEAMSMEERRMSSVKYQVHDETSQVS 352
           PSIGPPPVIANKAPATQPA NEVYLVW+DEAMSMEERRMS  KYQVHDE+SQ+S
Sbjct: 285 PSIGPPPVIANKAPATQPATNEVYLVWDDEAMSMEERRMSLPKYQVHDESSQMS 338

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449433517|ref|XP_004134544.1| PREDICTED: uncharacterized protein LOC101206973 [Cucumis sativus] gi|449506782|ref|XP_004162847.1| PREDICTED: uncharacterized protein LOC101227282 [Cucumis sativus]

 Score =  457 bits (1175), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 263/354 (74%), Positives = 291/354 (82%), Gaps = 5/354 (1%)

Query: 1   MGKKKKRVSSKVWCYYCDREFDDEKILVQHQKAKHFKCHVCHKKLSTAGGMAIHVLQVHK 60
           MGKKKKRVSSKVWCYYCDREFDDEKILVQHQKAKHFKCHVCHKKLSTAGGM IHVLQVHK
Sbjct: 1   MGKKKKRVSSKVWCYYCDREFDDEKILVQHQKAKHFKCHVCHKKLSTAGGMVIHVLQVHK 60

Query: 61  ENVTKVPNAKPGRESTDIEIYGMQGIPPDVLAAHYGEEEEVP-SKMAKVDTSFPQLVGGV 119
           E+VTKVPNAKPGRE+TDIEIYGMQGIPPDVLAAHYGEEEE   SK+AKV+    Q+VGGV
Sbjct: 61  ESVTKVPNAKPGREATDIEIYGMQGIPPDVLAAHYGEEEEESLSKVAKVEMPSTQMVGGV 120

Query: 120 VPGQLGVSYPPQSTLGMMQPIYSSAVPVPPAGWPVPPRPQPWYPQHAAVSIPPPAAVGYA 179
           VPG LG+ YPPQ  L  MQPIY S     P  WPVPPRPQPW+P ++AVSIPPP  +GYA
Sbjct: 121 VPGSLGIMYPPQPGLASMQPIYPSTGQAQPTAWPVPPRPQPWFPPNSAVSIPPPVQLGYA 180

Query: 180 QQPLFPVQNVRPPLASSTSPALQPSPVVPPGMPSSTPPVTVSQPLFPVVNNNTT-SQSSL 238
           QQPLFPVQ  RPPL  S++P LQP  + PPG+ S+TP  +VSQPLFPVV+N+   +QSS 
Sbjct: 181 QQPLFPVQTARPPLPVSSTPMLQPLQITPPGLTSTTPTASVSQPLFPVVSNSHGPTQSSP 240

Query: 239 FSAPIPSTSIALSSSAEIKGSVDAHSSANTSVTNSYHVPSMQGGTLSNSHSYASGPNTGG 298
           FS+   S SI L+S+A+IKGSV  H   N S T    V ++ GG LSNSHSYASGPNTGG
Sbjct: 241 FSSSTLSASIPLTSAADIKGSV-THLGTNFS-TIGNQVANIPGGILSNSHSYASGPNTGG 298

Query: 299 PSIGPPPVIANKAPATQPAVNEVYLVWEDEAMSMEERRMSSVKYQVHDETSQVS 352
           PSIGPPPVIANKAP TQP+ NEVYLVW+DEAMSMEERRMS  KYQVHDETSQ+S
Sbjct: 299 PSIGPPPVIANKAP-TQPSTNEVYLVWDDEAMSMEERRMSLTKYQVHDETSQMS 351

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	406
TAIR|locus:2015776	367	SUF4 "suppressor of FRIGIDA4"	0.344	0.381	0.715	1.4e-93
UNIPROTKB|J3QRS9	493	ZNF207 "Zinc finger protein 20	0.211	0.174	0.678	1.4e-41
UNIPROTKB|F1PRK3	494	ZNF207 "Uncharacterized protei	0.211	0.174	0.678	1.4e-41
UNIPROTKB|O43670	478	ZNF207 "Zinc finger protein 20	0.211	0.179	0.678	1.4e-41
UNIPROTKB|E2RI65	457	ZNF207 "Uncharacterized protei	0.211	0.188	0.678	1.4e-41
UNIPROTKB|F1RKW7	464	ZNF207 "Uncharacterized protei	0.211	0.185	0.678	7.5e-41
UNIPROTKB|F1MVH9	420	ZNF207 "Uncharacterized protei	0.211	0.204	0.678	7.5e-41
RGD|1308121	464	Zfp207 "zinc finger protein 20	0.211	0.185	0.678	2e-40
WB|WBGene00007105	341	B0035.1 [Caenorhabditis elegan	0.258	0.307	0.581	2.2e-39
ZFIN|ZDB-GENE-030131-7377	436	znf207b "zinc finger protein 2	0.211	0.197	0.666	9.3e-38

TAIR|locus:2015776 SUF4 "suppressor of FRIGIDA4" [Arabidopsis thaliana (taxid:3702)]

 Score = 528 (190.9 bits), Expect = 1.4e-93, Sum P(2) = 1.4e-93
 Identities = 103/144 (71%), Positives = 111/144 (77%)

Query:     1 MGKKKKRVSSKVWCYYCDREFDDEKILVQHQKAKHFKCHVCHKKLSTAGGMAIHVLQVHK 60
             MGKKKKR + KVWCYYCDREFDDEKILVQHQKAKHFKCHVCHKKLSTA GM IHVLQVHK
Sbjct:     1 MGKKKKRATEKVWCYYCDREFDDEKILVQHQKAKHFKCHVCHKKLSTASGMVIHVLQVHK 60

Query:    61 ENVTKVPNAKPGRESTDIEIYGMQGIPPDVLAAHYGEEE-EVPSKMAKVDTSFXXXXXXX 119
             ENVTKVPNAK GR+STDIEIYGMQGIPP VL AHYGEEE E P+K+AKV+          
Sbjct:    61 ENVTKVPNAKDGRDSTDIEIYGMQGIPPHVLTAHYGEEEDEPPAKVAKVEIP-SAPLGGV 119

Query:   120 XXXXXXXSYPPQSTLGMM--QPIY 141
                     YPPQ   G +  +P+Y
Sbjct:   120 VPRPYGMVYPPQQVPGAVPARPMY 143

GO:0003677 "DNA binding" evidence=IEA;IDA

GO:0005622 "intracellular" evidence=IEA

GO:0005634 "nucleus" evidence=ISM;IDA

GO:0008270 "zinc ion binding" evidence=IEA

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IMP;TAS

GO:0009910 "negative regulation of flower development" evidence=IGI

GO:0005515 "protein binding" evidence=IPI

GO:0042803 "protein homodimerization activity" evidence=IPI

GO:0046982 "protein heterodimerization activity" evidence=IPI

UNIPROTKB|J3QRS9 ZNF207 "Zinc finger protein 207" [Homo sapiens (taxid:9606)]

 Score = 347 (127.2 bits), Expect = 1.4e-41, Sum P(3) = 1.4e-41
 Identities = 59/87 (67%), Positives = 72/87 (82%)

Query:     1 MGKKKKRVSSKVWCYYCDREFDDEKILVQHQKAKHFKCHVCHKKLSTAGGMAIHVLQVHK 60
             MG+KKK+   K WC+YC+R+FDDEKIL+QHQKAKHFKCH+CHKKL T  G+AIH +QVHK
Sbjct:     1 MGRKKKK-QLKPWCWYCNRDFDDEKILIQHQKAKHFKCHICHKKLYTGPGLAIHCMQVHK 59

Query:    61 ENVTKVPNAKPGRESTDIEIYGMQGIP 87
             E +  VPNA PGR   ++EIYGM+GIP
Sbjct:    60 ETIDAVPNAIPGRTDIELEIYGMEGIP 86

GO:0005622 "intracellular" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

UNIPROTKB|F1PRK3 ZNF207 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 347 (127.2 bits), Expect = 1.4e-41, Sum P(3) = 1.4e-41
 Identities = 59/87 (67%), Positives = 72/87 (82%)

Query:     1 MGKKKKRVSSKVWCYYCDREFDDEKILVQHQKAKHFKCHVCHKKLSTAGGMAIHVLQVHK 60
             MG+KKK+   K WC+YC+R+FDDEKIL+QHQKAKHFKCH+CHKKL T  G+AIH +QVHK
Sbjct:     1 MGRKKKK-QLKPWCWYCNRDFDDEKILIQHQKAKHFKCHICHKKLYTGPGLAIHCMQVHK 59

Query:    61 ENVTKVPNAKPGRESTDIEIYGMQGIP 87
             E +  VPNA PGR   ++EIYGM+GIP
Sbjct:    60 ETIDAVPNAIPGRTDIELEIYGMEGIP 86

GO:0008270 "zinc ion binding" evidence=IEA

GO:0005622 "intracellular" evidence=IEA

UNIPROTKB|O43670 ZNF207 "Zinc finger protein 207" [Homo sapiens (taxid:9606)]

 Score = 347 (127.2 bits), Expect = 1.4e-41, Sum P(3) = 1.4e-41
 Identities = 59/87 (67%), Positives = 72/87 (82%)

Query:     1 MGKKKKRVSSKVWCYYCDREFDDEKILVQHQKAKHFKCHVCHKKLSTAGGMAIHVLQVHK 60
             MG+KKK+   K WC+YC+R+FDDEKIL+QHQKAKHFKCH+CHKKL T  G+AIH +QVHK
Sbjct:     1 MGRKKKK-QLKPWCWYCNRDFDDEKILIQHQKAKHFKCHICHKKLYTGPGLAIHCMQVHK 59

Query:    61 ENVTKVPNAKPGRESTDIEIYGMQGIP 87
             E +  VPNA PGR   ++EIYGM+GIP
Sbjct:    60 ETIDAVPNAIPGRTDIELEIYGMEGIP 86

GO:0003677 "DNA binding" evidence=IEA

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=NAS

GO:0008270 "zinc ion binding" evidence=NAS

GO:0005634 "nucleus" evidence=IDA;NAS

GO:0006355 "regulation of transcription, DNA-dependent" evidence=NAS

GO:0005730 "nucleolus" evidence=IDA

UNIPROTKB|E2RI65 ZNF207 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 347 (127.2 bits), Expect = 1.4e-41, Sum P(3) = 1.4e-41
 Identities = 59/87 (67%), Positives = 72/87 (82%)

Query:     1 MGKKKKRVSSKVWCYYCDREFDDEKILVQHQKAKHFKCHVCHKKLSTAGGMAIHVLQVHK 60
             MG+KKK+   K WC+YC+R+FDDEKIL+QHQKAKHFKCH+CHKKL T  G+AIH +QVHK
Sbjct:     1 MGRKKKK-QLKPWCWYCNRDFDDEKILIQHQKAKHFKCHICHKKLYTGPGLAIHCMQVHK 59

Query:    61 ENVTKVPNAKPGRESTDIEIYGMQGIP 87
             E +  VPNA PGR   ++EIYGM+GIP
Sbjct:    60 ETIDAVPNAIPGRTDIELEIYGMEGIP 86

GO:0008270 "zinc ion binding" evidence=IEA

GO:0005622 "intracellular" evidence=IEA

UNIPROTKB|F1RKW7 ZNF207 "Uncharacterized protein" [Sus scrofa (taxid:9823)]

 Score = 347 (127.2 bits), Expect = 7.5e-41, Sum P(3) = 7.5e-41
 Identities = 59/87 (67%), Positives = 72/87 (82%)

Query:     1 MGKKKKRVSSKVWCYYCDREFDDEKILVQHQKAKHFKCHVCHKKLSTAGGMAIHVLQVHK 60
             MG+KKK+   K WC+YC+R+FDDEKIL+QHQKAKHFKCH+CHKKL T  G+AIH +QVHK
Sbjct:     1 MGRKKKK-QLKPWCWYCNRDFDDEKILIQHQKAKHFKCHICHKKLYTGPGLAIHCMQVHK 59

Query:    61 ENVTKVPNAKPGRESTDIEIYGMQGIP 87
             E +  VPNA PGR   ++EIYGM+GIP
Sbjct:    60 ETIDAVPNAIPGRTDIELEIYGMEGIP 86

GO:0008201 "heparin binding" evidence=IEA

GO:0005634 "nucleus" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

UNIPROTKB|F1MVH9 ZNF207 "Uncharacterized protein" [Bos taurus (taxid:9913)]

 Score = 347 (127.2 bits), Expect = 7.5e-41, Sum P(3) = 7.5e-41
 Identities = 59/87 (67%), Positives = 72/87 (82%)

Query:     1 MGKKKKRVSSKVWCYYCDREFDDEKILVQHQKAKHFKCHVCHKKLSTAGGMAIHVLQVHK 60
             MG+KKK+   K WC+YC+R+FDDEKIL+QHQKAKHFKCH+CHKKL T  G+AIH +QVHK
Sbjct:     1 MGRKKKK-QLKPWCWYCNRDFDDEKILIQHQKAKHFKCHICHKKLYTGPGLAIHCMQVHK 59

Query:    61 ENVTKVPNAKPGRESTDIEIYGMQGIP 87
             E +  VPNA PGR   ++EIYGM+GIP
Sbjct:    60 ETIDAVPNAIPGRTDIELEIYGMEGIP 86

GO:0008201 "heparin binding" evidence=IEA

GO:0005634 "nucleus" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

RGD|1308121 Zfp207 "zinc finger protein 207" [Rattus norvegicus (taxid:10116)]

 Score = 347 (127.2 bits), Expect = 2.0e-40, Sum P(3) = 2.0e-40
 Identities = 59/87 (67%), Positives = 72/87 (82%)

Query:     1 MGKKKKRVSSKVWCYYCDREFDDEKILVQHQKAKHFKCHVCHKKLSTAGGMAIHVLQVHK 60
             MG+KKK+   K WC+YC+R+FDDEKIL+QHQKAKHFKCH+CHKKL T  G+AIH +QVHK
Sbjct:     1 MGRKKKK-QLKPWCWYCNRDFDDEKILIQHQKAKHFKCHICHKKLYTGPGLAIHCMQVHK 59

Query:    61 ENVTKVPNAKPGRESTDIEIYGMQGIP 87
             E +  VPNA PGR   ++EIYGM+GIP
Sbjct:    60 ETIDAVPNAIPGRTDIELEIYGMEGIP 86

GO:0005634 "nucleus" evidence=IEA;ISO

GO:0008201 "heparin binding" evidence=IEA;ISO

GO:0008270 "zinc ion binding" evidence=IEA

GO:0005730 "nucleolus" evidence=ISO

WB|WBGene00007105 B0035.1 [Caenorhabditis elegans (taxid:6239)]

 Score = 354 (129.7 bits), Expect = 2.2e-39, Sum P(3) = 2.2e-39
 Identities = 64/110 (58%), Positives = 84/110 (76%)

Query:     1 MGKKKKRVSSKVWCYYCDREFDDEKILVQHQKAKHFKCHVCHKKLSTAGGMAIHVLQVHK 60
             MG+KKK+V  K WC+YC+REFDDEKIL+QHQKAKHFKCH+CHKKL +  G++IH +QVHK
Sbjct:     1 MGRKKKKVD-KPWCWYCNREFDDEKILIQHQKAKHFKCHICHKKLFSGPGLSIHCMQVHK 59

Query:    61 ENVTKVPNAKPGRESTDIEIYGMQGIPPDVLAAHYGEEEEVPS-KMAKVD 109
             E + K+P A  GR++  +EIYGMQGIP     A+ G  +E P  K +++D
Sbjct:    60 ETIDKIPAAVHGRDNIHVEIYGMQGIPS---GAYRGAADEEPDEKRSRMD 106

GO:0008270 "zinc ion binding" evidence=IEA

ZFIN|ZDB-GENE-030131-7377 znf207b "zinc finger protein 207, b" [Danio rerio (taxid:7955)]

 Score = 343 (125.8 bits), Expect = 9.3e-38, Sum P(2) = 9.3e-38
 Identities = 58/87 (66%), Positives = 72/87 (82%)

Query:     1 MGKKKKRVSSKVWCYYCDREFDDEKILVQHQKAKHFKCHVCHKKLSTAGGMAIHVLQVHK 60
             MG+KKK+   K WC+YC+R+FDDEKIL+QHQKAKHFKCH+CHKKL T  G+AIH +QVHK
Sbjct:     1 MGRKKKK-QLKPWCWYCNRDFDDEKILIQHQKAKHFKCHICHKKLYTGPGLAIHCMQVHK 59

Query:    61 ENVTKVPNAKPGRESTDIEIYGMQGIP 87
             + +  VPNA PGR   ++EIYGM+GIP
Sbjct:    60 DTIDGVPNAIPGRTDIELEIYGMEGIP 86

GO:0008270 "zinc ion binding" evidence=IEA

GO:0005622 "intracellular" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input: estExt_fgenesh4_pm.C_LG_III0155 hypothetical protein (385 aa) (Populus trichocarpa)

Predicted Functional Partners:

Sorry, there are no predicted associations at the current settings.

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	406
PRK14950	585	PRK14950, PRK14950, DNA polymerase III subunits ga	2e-04
pfam03153	332	pfam03153, TFIIA, Transcription factor IIA, alpha/	4e-04
PRK14951	618	PRK14951, PRK14951, DNA polymerase III subunits ga	4e-04
PRK03427	333	PRK03427, PRK03427, cell division protein ZipA; Pr	7e-04
PHA03378	991	PHA03378, PHA03378, EBNA-3B; Provisional	0.001
PHA03247	3151	PHA03247, PHA03247, large tegument protein UL36; P	0.001
PHA03378	991	PHA03378, PHA03378, EBNA-3B; Provisional	0.002
pfam09770	804	pfam09770, PAT1, Topoisomerase II-associated prote	0.002
PHA03247	3151	PHA03247, PHA03247, large tegument protein UL36; P	0.003
PRK14971	614	PRK14971, PRK14971, DNA polymerase III subunits ga	0.003

>gnl|CDD|237864 PRK14950, PRK14950, DNA polymerase III subunits gamma and tau; Provisional

 Score = 43.3 bits (102), Expect = 2e-04
 Identities = 22/73 (30%), Positives = 23/73 (31%), Gaps = 1/73 (1%)

Query: 144 AVPVPPAGWPVPPRPQPWYPQHAAVSIPPPAAVGYAQQPLFPVQNVRPPLASSTSPALQP 203
            VP P    P    P P  P   A S  P AA      P  PV+    P      P   P
Sbjct: 362 PVPAPQPAKPTAAAPSPVRPT-PAPSTRPKAAAAANIPPKEPVRETATPPPVPPRPVAPP 420

Query: 204 SPVVPPGMPSSTP 216
            P  P   P  T 
Sbjct: 421 VPHTPESAPKLTR 433

Length = 585

>gnl|CDD|217392 pfam03153, TFIIA, Transcription factor IIA, alpha/beta subunit

 Score = 42.0 bits (99), Expect = 4e-04
 Identities = 33/207 (15%), Positives = 46/207 (22%), Gaps = 22/207 (10%)

Query: 136 MMQPIYSSAVPVPPAGWPVPPRPQPWYPQHAAVSIPPPAAVGYAQQPLFPVQNVRPPLAS 195
           + Q   S     P    P  P P    PQ      P  A            Q+  P  + 
Sbjct: 39  LSQ---SGVAEFPWDPSPQAPPPVAQLPQPLPQPPPTQALQALPAGD--QQQHNTPTGSP 93

Query: 196 STSPALQPS-PVVPPGMPSSTPPVTVSQPLFPVVNNNTTSQSSLFSAPIPSTSIALSSSA 254
           + +P    + P  P G    T P  +     PV+     + S L           L    
Sbjct: 94  AANPPATFALPAGPAGPTIQTEPGQLYPVQVPVMVTQNPANSPLDQPAQQRALQQLQQRY 153

Query: 255 EIKGSVDAHSSANTSVTN-SYHVPSMQGGTLSNSHSYASGPNTGGPSIGPPPVIANKAPA 313
               S    S   ++  N    +     G             T G        +     A
Sbjct: 154 GAPASGQLPSQQQSAQKNDESQLQQQPNGETPP-------QQTDGAGDDESEALVRLREA 206

Query: 314 TQPAVNEVYLVWEDEAMSMEERRMSSV 340
                       E      E      V
Sbjct: 207 DGTL--------EQRIKGAEGGGAMKV 225

Transcription initiation factor IIA (TFIIA) is a heterotrimer, the three subunits being known as alpha, beta, and gamma, in order of molecular weight. The N and C-terminal domains of the gamma subunit are represented in pfam02268 and pfam02751, respectively. This family represents the precursor that yields both the alpha and beta subunits. The TFIIA heterotrimer is an essential general transcription initiation factor for the expression of genes transcribed by RNA polymerase II. Together with TFIID, TFIIA binds to the promoter region; this is the first step in the formation of a pre-initiation complex (PIC). Binding of the rest of the transcription machinery follows this step. After initiation, the PIC does not completely dissociate from the promoter. Some components, including TFIIA, remain attached and re-initiate a subsequent round of transcription. Length = 332

>gnl|CDD|237865 PRK14951, PRK14951, DNA polymerase III subunits gamma and tau; Provisional

 Score = 42.4 bits (100), Expect = 4e-04
 Identities = 21/86 (24%), Positives = 28/86 (32%), Gaps = 2/86 (2%)

Query: 138 QPIYSSAVPVPPAGWPVPPRPQPWYPQHAAVSIPPPAAVGYAQQPLFPVQNVRPPLASST 197
               +SA   PPA  P  P   P     A  + P  A    A  P  P Q     +A   
Sbjct: 407 PAAAASAPAAPPAAAPPAPVAAP--AAAAPAAAPAAAPAAVALAPAPPAQAAPETVAIPV 464

Query: 198 SPALQPSPVVPPGMPSSTPPVTVSQP 223
             A +P+       P++ P      P
Sbjct: 465 RVAPEPAVASAAPAPAAAPAAARLTP 490

Length = 618

>gnl|CDD|235124 PRK03427, PRK03427, cell division protein ZipA; Provisional

 Score = 41.2 bits (97), Expect = 7e-04
 Identities = 26/108 (24%), Positives = 33/108 (30%), Gaps = 2/108 (1%)

Query: 129 PPQSTLGMMQPIYSSAVPVPPAGWPV-PPRPQPWYPQHAAVSIPPPAAVGYAQQPLFPVQ 187
              S     QP Y+SA P  P   P     P    P+ A  +  P     Y  QP  P+Q
Sbjct: 84  ARPSPQHQYQPPYASAQPRQPVQQPPEAQVPPQHAPRPAQPAPQPVQQPAYQPQPEQPLQ 143

Query: 188 NVRPPLASSTSPALQPSPVVPPGMPSSTPPVTVSQPLFPVVNNNTTSQ 235
               P  +     +  +P           PV   QP  PV        
Sbjct: 144 QPVSPQVAPAPQPVHSAPQPAQQAFQPAEPVAAPQPE-PVAEPAPVMD 190

Length = 333

>gnl|CDD|223065 PHA03378, PHA03378, EBNA-3B; Provisional

 Score = 41.2 bits (96), Expect = 0.001
 Identities = 33/97 (34%), Positives = 40/97 (41%), Gaps = 11/97 (11%)

Query: 129 PPQSTLGMMQPIYSSAVPV-PPAGWPVPPRPQPWYPQHAAVSIPPPAAVGYAQQPLFPVQ 187
           PP +  G  Q   ++     PPA  P   RP    P  A    PP AA G A+ P     
Sbjct: 706 PPAAPPGRAQRPAAATGRARPPAAAPGRARPPAAAPGRAR---PPAAAPGRARPPAAAPG 762

Query: 188 NVRPPLASSTSPALQPSPVVPP-------GMPSSTPP 217
             RPP A+  +P  QP P  PP       G P+  PP
Sbjct: 763 RARPPAAAPGAPTPQPPPQAPPAPQQRPRGAPTPQPP 799

Length = 991

>gnl|CDD|223021 PHA03247, PHA03247, large tegument protein UL36; Provisional

 Score = 41.1 bits (96), Expect = 0.001
 Identities = 35/172 (20%), Positives = 49/172 (28%), Gaps = 8/172 (4%)

Query: 153  PVPPRPQPWYPQHAAVS---IPPPAAVGYAQQPLFPVQNVRPPLASST----SPALQPSP 205
            P PP   P    HA VS   +PP  A      P  P     P + +       PA    P
Sbjct: 2702 PPPPPT-PEPAPHALVSATPLPPGPAAARQASPALPAAPAPPAVPAGPATPGGPARPARP 2760

Query: 206  VVPPGMPSSTPPVTVSQPLFPVVNNNTTSQSSLFSAPIPSTSIALSSSAEIKGSVDAHSS 265
                G P+  PP   +      +     +  S     +PS        A +     A   
Sbjct: 2761 PTTAGPPAPAPPAAPAAGPPRRLTRPAVASLSESRESLPSPWDPADPPAAVLAPAAALPP 2820

Query: 266  ANTSVTNSYHVPSMQGGTLSNSHSYASGPNTGGPSIGPPPVIANKAPATQPA 317
            A +         S Q                 G S+ P   +  + P+  PA
Sbjct: 2821 AASPAGPLPPPTSAQPTAPPPPPGPPPPSLPLGGSVAPGGDVRRRPPSRSPA 2872

Length = 3151

>gnl|CDD|223065 PHA03378, PHA03378, EBNA-3B; Provisional

 Score = 40.4 bits (94), Expect = 0.002
 Identities = 32/106 (30%), Positives = 39/106 (36%), Gaps = 13/106 (12%)

Query: 121 PGQLGVSYPPQSTLGMMQPIYSSAVPV-PPAGWPVPPRPQPWYPQHAAVSIPPPAAV-GY 178
           P       P Q   G MQP   +  P+ PPA  P   +     P  A     PPAA  G 
Sbjct: 678 PTGANTMLPIQWAPGTMQPPPRAPTPMRPPAAPPGRAQR----PAAATGRARPPAAAPGR 733

Query: 179 AQQPLFPVQNVRPPLASST-------SPALQPSPVVPPGMPSSTPP 217
           A+ P       RPP A+         +P     P   PG P+  PP
Sbjct: 734 ARPPAAAPGRARPPAAAPGRARPPAAAPGRARPPAAAPGAPTPQPP 779

Length = 991

>gnl|CDD|220392 pfam09770, PAT1, Topoisomerase II-associated protein PAT1

 Score = 40.5 bits (95), Expect = 0.002
 Identities = 37/168 (22%), Positives = 45/168 (26%), Gaps = 22/168 (13%)

Query: 129 PPQSTLGMMQP----IYSSAVPVPPAGWPVPPRPQPWYPQHAAVSIPPPAAVGYAQQPLF 184
           P Q     M P          P  P G+P PP+  P   Q       P  A     QP  
Sbjct: 176 PQQVLPQGMPPRQAAFPQQGPPEQPPGYPQPPQGHPEQVQPQQFLPAPSQA---PAQPPL 232

Query: 185 PVQ--NVRPPLASSTSPALQ----PSPVVPPGMPSSTPPVTVSQPLFPVVNNNTTSQSSL 238
           P Q     PPL     P L     P P  PP      PP   +QP  P  N  T      
Sbjct: 233 PPQLPQQPPPLQQPQFPGLSQQMPPPPPQPPQQ-QQQPPQPQAQP--PPQNQPTPHPGLP 289

Query: 239 FSA------PIPSTSIALSSSAEIKGSVDAHSSANTSVTNSYHVPSMQ 280
                    P     + L    + +            ++        Q
Sbjct: 290 QGQNAPLPPPQQPQLLPLVQQPQGQQRGPQFREQLVQLSQQQREALSQ 337

Members of this family are necessary for accurate chromosome transmission during cell division. Length = 804

>gnl|CDD|223021 PHA03247, PHA03247, large tegument protein UL36; Provisional

 Score = 39.9 bits (93), Expect = 0.003
 Identities = 44/191 (23%), Positives = 69/191 (36%), Gaps = 14/191 (7%)

Query: 129  PPQSTLGMMQPIYSSAVPVPPAGWPVPPRPQPWYPQHAAVSIPPPAAVGYAQQPLFPVQN 188
              +ST     P      P  P   P PP+PQP  P       PPP      Q PL P   
Sbjct: 2891 VSRSTESFALPPDQPERPPQPQA-PPPPQPQPQPPP-PPQPQPPPPPPPRPQPPLAP--- 2945

Query: 189  VRPPLASSTSPALQPSPVVPPGMPSSTPPVTVSQPLFPVVNNNTTSQSSLFSAPIPSTSI 248
                  +  + A +PS  VP     +  P  V+ P F V     + ++   S P P T  
Sbjct: 2946 -----TTDPAGAGEPSGAVPQPWLGALVPGRVAVPRFRVPQPAPSREAPASSTP-PLTGH 2999

Query: 249  ALSSSAEIKGSVDAHSSAN---TSVTNSYHVPSMQGGTLSNSHSYASGPNTGGPSIGPPP 305
            +LS  +    S+  H   +    S+  +   P     + ++S   +    +   ++ P P
Sbjct: 3000 SLSRVSSWASSLALHEETDPPPVSLKQTLWPPDDTEDSDADSLFDSDSERSDLEALDPLP 3059

Query: 306  VIANKAPATQP 316
               +   A +P
Sbjct: 3060 PEPHDPFAHEP 3070

Length = 3151

>gnl|CDD|237874 PRK14971, PRK14971, DNA polymerase III subunits gamma and tau; Provisional

 Score = 39.4 bits (92), Expect = 0.003
 Identities = 17/95 (17%), Positives = 30/95 (31%), Gaps = 4/95 (4%)

Query: 129 PPQSTLGMMQPIYSSAVPVPPAGWPVPPRPQPWYPQHAAVSIPPPAAVGYAQQPLFPVQ- 187
             +     ++P+++     P         P P     ++ +  P A     Q    P   
Sbjct: 371 GGRGPKQHIKPVFTQPAAAPQPSAAAAASPSP---SQSSAAAQPSAPQSATQPAGTPPTV 427

Query: 188 NVRPPLASSTSPALQPSPVVPPGMPSSTPPVTVSQ 222
           +V PP A   +P       V P        + VS+
Sbjct: 428 SVDPPAAVPVNPPSTAPQAVRPAQFKEEKKIPVSK 462

Length = 614

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	406
KOG2893	341	consensus Zn finger protein [General function pred	99.94
KOG2462	279	consensus C2H2-type Zn-finger protein [Transcripti	99.51
KOG2462	279	consensus C2H2-type Zn-finger protein [Transcripti	99.4
KOG3623	1007	consensus Homeobox transcription factor SIP1 [Tran	99.19
KOG3576	267	consensus Ovo and related transcription factors [T	99.09
KOG3576	267	consensus Ovo and related transcription factors [T	99.04
KOG3623	1007	consensus Homeobox transcription factor SIP1 [Tran	98.95
KOG1074	958	consensus Transcriptional repressor SALM [Transcri	98.79
KOG1074	958	consensus Transcriptional repressor SALM [Transcri	98.71
PHA00733	128	hypothetical protein	98.54
PHA00733	128	hypothetical protein	98.54
KOG3608	467	consensus Zn finger proteins [General function pre	98.5
PHA02768	55	hypothetical protein; Provisional	98.48
KOG3608	467	consensus Zn finger proteins [General function pre	98.32
KOG3993	500	consensus Transcription factor (contains Zn finger	98.31
PLN03086	567	PRLI-interacting factor K; Provisional	98.27
PHA02768	55	hypothetical protein; Provisional	98.21
PHA00616	44	hypothetical protein	97.94
PHA00732	79	hypothetical protein	97.93
PHA00732	79	hypothetical protein	97.72
KOG3993	500	consensus Transcription factor (contains Zn finger	97.64
COG5189	423	SFP1 Putative transcriptional repressor regulating	97.57
PF05605	54	zf-Di19: Drought induced 19 protein (Di19), zinc-b	97.45
PF13465	26	zf-H2C2_2: Zinc-finger double domain; PDB: 2EN7_A	97.41
KOG2893	341	consensus Zn finger protein [General function pred	97.33
PF00096	23	zf-C2H2: Zinc finger, C2H2 type; InterPro: IPR0070	97.31
PF13894	24	zf-C2H2_4: C2H2-type zinc finger; PDB: 2ELX_A 2EPP	97.21
PLN03086	567	PRLI-interacting factor K; Provisional	97.2
PF12756	100	zf-C2H2_2: C2H2 type zinc-finger (2 copies); PDB:	97.07
PF13912	27	zf-C2H2_6: C2H2-type zinc finger; PDB: 1JN7_A 1FU9	96.95
PHA00616	44	hypothetical protein	96.66
COG5189	423	SFP1 Putative transcriptional repressor regulating	96.4
PF00096	23	zf-C2H2: Zinc finger, C2H2 type; InterPro: IPR0070	96.39
PF12756	100	zf-C2H2_2: C2H2 type zinc-finger (2 copies); PDB:	96.34
PF09237	54	GAGA: GAGA factor; InterPro: IPR015318 Zinc finger	96.31
smart00355	26	ZnF_C2H2 zinc finger.	96.19
KOG1924	1102	consensus RhoA GTPase effector DIA/Diaphanous [Sig	96.05
PF05605	54	zf-Di19: Drought induced 19 protein (Di19), zinc-b	95.85
PF13465	26	zf-H2C2_2: Zinc-finger double domain; PDB: 2EN7_A	95.56
PF13894	24	zf-C2H2_4: C2H2-type zinc finger; PDB: 2ELX_A 2EPP	95.18
PF12171	27	zf-C2H2_jaz: Zinc-finger double-stranded RNA-bindi	95.02
PF13909	24	zf-H2C2_5: C2H2-type zinc-finger domain; PDB: 1X5W	94.78
KOG3671	569	consensus Actin regulatory protein (Wiskott-Aldric	94.59
PF12874	25	zf-met: Zinc-finger of C2H2 type; PDB: 1ZU1_A 2KVG	94.45
PF13912	27	zf-C2H2_6: C2H2-type zinc finger; PDB: 1JN7_A 1FU9	94.31
KOG2231	669	consensus Predicted E3 ubiquitin ligase [Posttrans	94.01
COG5236	493	Uncharacterized conserved protein, contains RING Z	93.94
KOG1924	1102	consensus RhoA GTPase effector DIA/Diaphanous [Sig	93.92
PF12171	27	zf-C2H2_jaz: Zinc-finger double-stranded RNA-bindi	93.81
smart00355	26	ZnF_C2H2 zinc finger.	93.42
PF12874	25	zf-met: Zinc-finger of C2H2 type; PDB: 1ZU1_A 2KVG	92.55
KOG2482	423	consensus Predicted C2H2-type Zn-finger protein [T	91.88
PF09237	54	GAGA: GAGA factor; InterPro: IPR015318 Zinc finger	91.33
COG5048	467	FOG: Zn-finger [General function prediction only]	90.96
smart00451	35	ZnF_U1 U1-like zinc finger. Family of C2H2-type zi	90.94
KOG1146	1406	consensus Homeobox protein [General function predi	90.38
PRK04860	160	hypothetical protein; Provisional	88.86
KOG2231	669	consensus Predicted E3 ubiquitin ligase [Posttrans	88.48
PF09538	108	FYDLN_acid: Protein of unknown function (FYDLN_aci	88.12
PF13913	25	zf-C2HC_2: zinc-finger of a C2HC-type	87.18
smart00451	35	ZnF_U1 U1-like zinc finger. Family of C2H2-type zi	86.82
COG5048	467	FOG: Zn-finger [General function prediction only]	85.58
PF13913	25	zf-C2HC_2: zinc-finger of a C2HC-type	85.53
KOG1146	1406	consensus Homeobox protein [General function predi	84.84
TIGR02300	129	FYDLN_acid conserved hypothetical protein TIGR0230	83.13
PHA03247	3151	large tegument protein UL36; Provisional	82.17
COG5236	493	Uncharacterized conserved protein, contains RING Z	80.34

>KOG2893 consensus Zn finger protein [General function prediction only]

Probab=99.94  E-value=4.3e-25  Score=208.14  Aligned_cols=93  Identities=61%  Similarity=1.170  Sum_probs=87.1

Q ss_pred             CCCCccCCCCccccCccCcccCChHHHHHHhhccccccccccCccCCchhhHhhhhhhccCcccccCCCCCCCCccceee
Q 015460            1 MGKKKKRVSSKVWCYYCDREFDDEKILVQHQKAKHFKCHVCHKKLSTAGGMAIHVLQVHKENVTKVPNAKPGRESTDIEI   80 (406)
Q Consensus         1 M~rKkkr~gEKp~C~~CgK~Fs~ks~Lk~H~REKPfkC~~CgksFss~s~LkrH~rthHgek~~~Cp~~~~~r~s~~c~i   80 (406)
                      |+||||| ..|+||-+|++.|.++..|.+|++.|.|||++|+|.+.+--.|..|..++|+|...+.+++..+|...+.+|
T Consensus         1 mgrkkkk-~~kpwcwycnrefddekiliqhqkakhfkchichkkl~sgpglsihcmqvhketid~ip~av~gr~~i~vei   79 (341)
T KOG2893|consen    1 MGRKKKK-VDKPWCWYCNREFDDEKILIQHQKAKHFKCHICHKKLFSGPGLSIHCMQVHKETIDKIPAAVHGRDNIHVEI   79 (341)
T ss_pred             CCccccc-cCCceeeecccccchhhhhhhhhhhccceeeeehhhhccCCCceeehhhhhhhhhhcccccccCCcceeEEE
Confidence            8999998 789999999999999999999999999999999999999999999999999998889999999999999999


Q ss_pred             cCCCCCCHhHHHHH
Q 015460           81 YGMQGIPPDVLAAH   94 (406)
Q Consensus        81 CG~~fi~~~~L~~H   94 (406)
                      +|+.+|.+...+.-
T Consensus        80 ygmqgip~~~~r~~   93 (341)
T KOG2893|consen   80 YGMQGIPSGAYRGA   93 (341)
T ss_pred             eeccCCCchhhhhh
Confidence            99999999766543

>KOG2462 consensus C2H2-type Zn-finger protein [Transcription]

Probab=99.51  E-value=1.4e-14  Score=140.09  Aligned_cols=75  Identities=21%  Similarity=0.342  Sum_probs=63.6

Q ss_pred             cCccCcccCChHHHHHHhh--ccccccccccCccCCchhhHhhhhhhccCcccccCCCCCCCCccceeecCCCCCCHhHH
Q 015460           14 CYYCDREFDDEKILVQHQK--AKHFKCHVCHKKLSTAGGMAIHVLQVHKENVTKVPNAKPGRESTDIEIYGMQGIPPDVL   91 (406)
Q Consensus        14 C~~CgK~Fs~ks~Lk~H~R--EKPfkC~~CgksFss~s~LkrH~rthHgek~~~Cp~~~~~r~s~~c~iCG~~fi~~~~L   91 (406)
                      |++|||.|.....|+.|+|  .-+++|.+|||.|.+...|+.|+|+|+|||+|.|+.            |++.|.++++|
T Consensus       164 C~~C~K~YvSmpALkMHirTH~l~c~C~iCGKaFSRPWLLQGHiRTHTGEKPF~C~h------------C~kAFADRSNL  231 (279)
T KOG2462|consen  164 CKYCGKVYVSMPALKMHIRTHTLPCECGICGKAFSRPWLLQGHIRTHTGEKPFSCPH------------CGKAFADRSNL  231 (279)
T ss_pred             CCCCCceeeehHHHhhHhhccCCCcccccccccccchHHhhcccccccCCCCccCCc------------ccchhcchHHH
Confidence            9999999999999999999  669999999999999999999999999999887764            55666666666


Q ss_pred             HHHhhhccC
Q 015460           92 AAHYGEEEE  100 (406)
Q Consensus        92 ~~H~k~he~  100 (406)
                      +.|+++|.+
T Consensus       232 RAHmQTHS~  240 (279)
T KOG2462|consen  232 RAHMQTHSD  240 (279)
T ss_pred             HHHHHhhcC
Confidence            666666655

>KOG2462 consensus C2H2-type Zn-finger protein [Transcription]

Probab=99.40  E-value=7.6e-14  Score=134.93  Aligned_cols=72  Identities=19%  Similarity=0.309  Sum_probs=66.3

Q ss_pred             ccCccCcccCChHHHHHHhh----ccccccccccCccCCchhhHhhhhhhccCcccccCCCCCCCCccceeecCCCCCCH
Q 015460           13 WCYYCDREFDDEKILVQHQK----AKHFKCHVCHKKLSTAGGMAIHVLQVHKENVTKVPNAKPGRESTDIEIYGMQGIPP   88 (406)
Q Consensus        13 ~C~~CgK~Fs~ks~Lk~H~R----EKPfkC~~CgksFss~s~LkrH~rthHgek~~~Cp~~~~~r~s~~c~iCG~~fi~~   88 (406)
                      .|.+|||.|.+.=.|..|+|    ||||.|..|+|+|..++||+.|+++|.+.|.|            .|..||+.|...
T Consensus       189 ~C~iCGKaFSRPWLLQGHiRTHTGEKPF~C~hC~kAFADRSNLRAHmQTHS~~K~~------------qC~~C~KsFsl~  256 (279)
T KOG2462|consen  189 ECGICGKAFSRPWLLQGHIRTHTGEKPFSCPHCGKAFADRSNLRAHMQTHSDVKKH------------QCPRCGKSFALK  256 (279)
T ss_pred             ccccccccccchHHhhcccccccCCCCccCCcccchhcchHHHHHHHHhhcCCccc------------cCcchhhHHHHH
Confidence            39999999999999999999    99999999999999999999999999888754            456699999999


Q ss_pred             hHHHHHhh
Q 015460           89 DVLAAHYG   96 (406)
Q Consensus        89 ~~L~~H~k   96 (406)
                      +.|.+|++
T Consensus       257 SyLnKH~E  264 (279)
T KOG2462|consen  257 SYLNKHSE  264 (279)
T ss_pred             HHHHHhhh
Confidence            99999974

>KOG3623 consensus Homeobox transcription factor SIP1 [Transcription]

Probab=99.19  E-value=4.1e-12  Score=135.16  Aligned_cols=81  Identities=16%  Similarity=0.350  Sum_probs=71.6

Q ss_pred             CccCCCCccc-cCccCcccCChHHHHHHhh----ccccccccccCccCCchhhHhhhhhhccCcccccCCCCCCCCccce
Q 015460            4 KKKRVSSKVW-CYYCDREFDDEKILVQHQK----AKHFKCHVCHKKLSTAGGMAIHVLQVHKENVTKVPNAKPGRESTDI   78 (406)
Q Consensus         4 Kkkr~gEKp~-C~~CgK~Fs~ks~Lk~H~R----EKPfkC~~CgksFss~s~LkrH~rthHgek~~~Cp~~~~~r~s~~c   78 (406)
                      |.++..+..| |+.|+|.|...+.|.||.-    .|||+|.+|.|+|+.+.+|..|+|.|.|||+|.|            
T Consensus       886 k~~kte~gmyaCDqCDK~FqKqSSLaRHKYEHsGqRPyqC~iCkKAFKHKHHLtEHkRLHSGEKPfQC------------  953 (1007)
T KOG3623|consen  886 KHAKTEDGMYACDQCDKAFQKQSSLARHKYEHSGQRPYQCIICKKAFKHKHHLTEHKRLHSGEKPFQC------------  953 (1007)
T ss_pred             ccccCccccchHHHHHHHHHhhHHHHHhhhhhcCCCCcccchhhHhhhhhhhhhhhhhhccCCCcchh------------
Confidence            3445556678 9999999999999999976    8999999999999999999999999999997655            


Q ss_pred             eecCCCCCCHhHHHHHhh
Q 015460           79 EIYGMQGIPPDVLAAHYG   96 (406)
Q Consensus        79 ~iCG~~fi~~~~L~~H~k   96 (406)
                      +.|+++|.+.....+||.
T Consensus       954 dKClKRFSHSGSYSQHMN  971 (1007)
T KOG3623|consen  954 DKCLKRFSHSGSYSQHMN  971 (1007)
T ss_pred             hhhhhhcccccchHhhhc
Confidence            568899999999999985

>KOG3576 consensus Ovo and related transcription factors [Transcription]

Probab=99.09  E-value=1.8e-11  Score=114.19  Aligned_cols=91  Identities=20%  Similarity=0.278  Sum_probs=69.0

Q ss_pred             CccccCccCcccCChHHHHHHhh----ccccccccccCccCCchhhHhhhhhhccCcccccCCCC---CCC---------
Q 015460           10 SKVWCYYCDREFDDEKILVQHQK----AKHFKCHVCHKKLSTAGGMAIHVLQVHKENVTKVPNAK---PGR---------   73 (406)
Q Consensus        10 EKp~C~~CgK~Fs~ks~Lk~H~R----EKPfkC~~CgksFss~s~LkrH~rthHgek~~~Cp~~~---~~r---------   73 (406)
                      ..+.|.+|+|.|....-|.+|++    .|.|.|..|||.|...-+|+||+|+|+|.++|+|..|.   ..|         
T Consensus       116 d~ftCrvCgK~F~lQRmlnrh~kch~~vkr~lct~cgkgfndtfdlkrh~rthtgvrpykc~~c~kaftqrcsleshl~k  195 (267)
T KOG3576|consen  116 DSFTCRVCGKKFGLQRMLNRHLKCHSDVKRHLCTFCGKGFNDTFDLKRHTRTHTGVRPYKCSLCEKAFTQRCSLESHLKK  195 (267)
T ss_pred             CeeeeehhhhhhhHHHHHHHHhhhccHHHHHHHhhccCcccchhhhhhhhccccCccccchhhhhHHHHhhccHHHHHHH
Confidence            34449999999999999999998    78889999999999999999999999998887776531   111         


Q ss_pred             ---------------CccceeecCCCCCCHhHHHHHhhhccC
Q 015460           74 ---------------ESTDIEIYGMQGIPPDVLAAHYGEEEE  100 (406)
Q Consensus        74 ---------------~s~~c~iCG~~fi~~~~L~~H~k~he~  100 (406)
                                     +-|.|+.||-.....+.+..|.+.|..
T Consensus       196 vhgv~~~yaykerr~kl~vcedcg~t~~~~e~~~~h~~~~hp  237 (267)
T KOG3576|consen  196 VHGVQHQYAYKERRAKLYVCEDCGYTSERPEVYYLHLKLHHP  237 (267)
T ss_pred             HcCchHHHHHHHhhhheeeecccCCCCCChhHHHHHHHhcCC
Confidence                           124667777776777777777766554

>KOG3576 consensus Ovo and related transcription factors [Transcription]

Probab=99.04  E-value=3.7e-11  Score=112.09  Aligned_cols=62  Identities=23%  Similarity=0.544  Sum_probs=54.1

Q ss_pred             CCccc-cCccCcccCChHHHHHHhh----ccccccccccCccCCchhhHhhhhhhccC-----------cccccCCCC
Q 015460            9 SSKVW-CYYCDREFDDEKILVQHQK----AKHFKCHVCHKKLSTAGGMAIHVLQVHKE-----------NVTKVPNAK   70 (406)
Q Consensus         9 gEKp~-C~~CgK~Fs~ks~Lk~H~R----EKPfkC~~CgksFss~s~LkrH~rthHge-----------k~~~Cp~~~   70 (406)
                      .-|.+ |..|||.|.+-.+|++|+|    .|||+|..|+|+|+++..|..|.+.+||.           |.|.|..|-
T Consensus       142 ~vkr~lct~cgkgfndtfdlkrh~rthtgvrpykc~~c~kaftqrcsleshl~kvhgv~~~yaykerr~kl~vcedcg  219 (267)
T KOG3576|consen  142 DVKRHLCTFCGKGFNDTFDLKRHTRTHTGVRPYKCSLCEKAFTQRCSLESHLKKVHGVQHQYAYKERRAKLYVCEDCG  219 (267)
T ss_pred             HHHHHHHhhccCcccchhhhhhhhccccCccccchhhhhHHHHhhccHHHHHHHHcCchHHHHHHHhhhheeeecccC
Confidence            34556 9999999999999999999    89999999999999999999999988863           447787743

>KOG3623 consensus Homeobox transcription factor SIP1 [Transcription]

Probab=98.95  E-value=2e-10  Score=122.51  Aligned_cols=62  Identities=24%  Similarity=0.428  Sum_probs=56.0

Q ss_pred             CccccCccCcccCChHHHHHHhh-----------------ccccccccccCccCCchhhHhhhhhhccCcccccCCCCC
Q 015460           10 SKVWCYYCDREFDDEKILVQHQK-----------------AKHFKCHVCHKKLSTAGGMAIHVLQVHKENVTKVPNAKP   71 (406)
Q Consensus        10 EKp~C~~CgK~Fs~ks~Lk~H~R-----------------EKPfkC~~CgksFss~s~LkrH~rthHgek~~~Cp~~~~   71 (406)
                      +.+.|..|..+|..+..|.+|+.                 .|.|||.+|||+|+.+.+|+.|+|+|.|||+|.|++|+.
T Consensus       239 ~nfsC~lCsytFAyRtQLErhm~~hkpg~dqa~sltqsa~lRKFKCtECgKAFKfKHHLKEHlRIHSGEKPfeCpnCkK  317 (1007)
T KOG3623|consen  239 PNFSCMLCSYTFAYRTQLERHMQLHKPGGDQAISLTQSALLRKFKCTECGKAFKFKHHLKEHLRIHSGEKPFECPNCKK  317 (1007)
T ss_pred             CCCcchhhhhhhhhHHHHHHHHHhhcCCCcccccccchhhhccccccccchhhhhHHHHHhhheeecCCCCcCCccccc
Confidence            33449999999999999999986                 678999999999999999999999999999999998653

>KOG1074 consensus Transcriptional repressor SALM [Transcription]

Probab=98.79  E-value=1.7e-09  Score=117.13  Aligned_cols=79  Identities=24%  Similarity=0.408  Sum_probs=70.0

Q ss_pred             cCccCcccCChHHHHHHhh----ccccccccccCccCCchhhHhhhhhhccCcccccCCCCCCCCcccee---ecCCCCC
Q 015460           14 CYYCDREFDDEKILVQHQK----AKHFKCHVCHKKLSTAGGMAIHVLQVHKENVTKVPNAKPGRESTDIE---IYGMQGI   86 (406)
Q Consensus        14 C~~CgK~Fs~ks~Lk~H~R----EKPfkC~~CgksFss~s~LkrH~rthHgek~~~Cp~~~~~r~s~~c~---iCG~~fi   86 (406)
                      |-+|-|+.+.++.|+.|.|    ||||||.+||++|+++.+|+.|+-. |+.|+       ..|-.+.|.   +|.+.|.
T Consensus       608 CiiC~rVlSC~saLqmHyrtHtGERPFkCKiCgRAFtTkGNLkaH~~v-Hka~p-------~~R~q~ScP~~~ic~~kft  679 (958)
T KOG1074|consen  608 CIICLRVLSCPSALQMHYRTHTGERPFKCKICGRAFTTKGNLKAHMSV-HKAKP-------PARVQFSCPSTFICQKKFT  679 (958)
T ss_pred             eeeeeecccchhhhhhhhhcccCcCccccccccchhccccchhhcccc-cccCc-------cccccccCCchhhhccccc
Confidence            9999999999999999999    9999999999999999999999844 44443       345667787   9999999


Q ss_pred             CHhHHHHHhhhccC
Q 015460           87 PPDVLAAHYGEEEE  100 (406)
Q Consensus        87 ~~~~L~~H~k~he~  100 (406)
                      ..-.|.+|++.|..
T Consensus       680 n~V~lpQhIriH~~  693 (958)
T KOG1074|consen  680 NAVTLPQHIRIHLG  693 (958)
T ss_pred             ccccccceEEeecC
Confidence            99999999999884

>KOG1074 consensus Transcriptional repressor SALM [Transcription]

Probab=98.71  E-value=4.9e-09  Score=113.64  Aligned_cols=76  Identities=24%  Similarity=0.452  Sum_probs=59.7

Q ss_pred             CccccCccCcccCChHHHHHHhh----ccccccccccCccCCchhhHhhhhhhccCcccccCCCCCCCCccceeecCCCC
Q 015460           10 SKVWCYYCDREFDDEKILVQHQK----AKHFKCHVCHKKLSTAGGMAIHVLQVHKENVTKVPNAKPGRESTDIEIYGMQG   85 (406)
Q Consensus        10 EKp~C~~CgK~Fs~ks~Lk~H~R----EKPfkC~~CgksFss~s~LkrH~rthHgek~~~Cp~~~~~r~s~~c~iCG~~f   85 (406)
                      .|..|.+|.|.|...+.|+.|.|    ||||+|.+||++|+++.+|+.|..+|+.+-+..--+.+..-.-++|.+|-..+
T Consensus       352 ~khkCr~CakvfgS~SaLqiHlRSHTGERPfqCnvCG~~FSTkGNLKvH~~rH~e~~p~~~m~p~~~~e~l~~~i~st~~  431 (958)
T KOG1074|consen  352 FKHKCRFCAKVFGSDSALQIHLRSHTGERPFQCNVCGNRFSTKGNLKVHFQRHREKYPHVQMNPHPVQEHLQYVITSTGL  431 (958)
T ss_pred             ccchhhhhHhhcCchhhhhhhhhccCCCCCeeecccccccccccceeeeeeeccccCCccccCCCCchhhhcceeecccc
Confidence            34459999999999999999999    99999999999999999999998777655443333445555556666664433

>PHA00733 hypothetical protein

Probab=98.54  E-value=6.2e-08  Score=85.33  Aligned_cols=76  Identities=14%  Similarity=0.181  Sum_probs=62.5

Q ss_pred             ccc-cCccCcccCChHHHHHH------hh---ccccccccccCccCCchhhHhhhhhhccCcccccCCCCCCCCccceee
Q 015460           11 KVW-CYYCDREFDDEKILVQH------QK---AKHFKCHVCHKKLSTAGGMAIHVLQVHKENVTKVPNAKPGRESTDIEI   80 (406)
Q Consensus        11 Kp~-C~~CgK~Fs~ks~Lk~H------~R---EKPfkC~~CgksFss~s~LkrH~rthHgek~~~Cp~~~~~r~s~~c~i   80 (406)
                      |.+ |.+|++.|.....|+.|      +.   +++|+|.+|++.|.+...|+.|++.+  ++            .+.|.+
T Consensus        39 ~~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~kPy~C~~Cgk~Fss~s~L~~H~r~h--~~------------~~~C~~  104 (128)
T PHA00733         39 KRLIRAVVKTLIYNPQLLDESSYLYKLLTSKAVSPYVCPLCLMPFSSSVSLKQHIRYT--EH------------SKVCPV  104 (128)
T ss_pred             hhHHHHHHhhhccChhhhcchHHHHhhcccCCCCCccCCCCCCcCCCHHHHHHHHhcC--Cc------------CccCCC
Confidence            344 99999999888777666      22   78999999999999999999998754  21            367889


Q ss_pred             cCCCCCCHhHHHHHhhhccC
Q 015460           81 YGMQGIPPDVLAAHYGEEEE  100 (406)
Q Consensus        81 CG~~fi~~~~L~~H~k~he~  100 (406)
                      |++.|.....|.+|+....+
T Consensus       105 CgK~F~~~~sL~~H~~~~h~  124 (128)
T PHA00733        105 CGKEFRNTDSTLDHVCKKHN  124 (128)
T ss_pred             CCCccCCHHHHHHHHHHhcC
Confidence            99999999999999876543

>PHA00733 hypothetical protein

Probab=98.54  E-value=6.8e-08  Score=85.07  Aligned_cols=54  Identities=24%  Similarity=0.398  Sum_probs=49.5

Q ss_pred             CCCccc-cCccCcccCChHHHHHHhh--ccccccccccCccCCchhhHhhhhhhccC
Q 015460            8 VSSKVW-CYYCDREFDDEKILVQHQK--AKHFKCHVCHKKLSTAGGMAIHVLQVHKE   61 (406)
Q Consensus         8 ~gEKp~-C~~CgK~Fs~ks~Lk~H~R--EKPfkC~~CgksFss~s~LkrH~rthHge   61 (406)
                      .+++++ |..||+.|.....|++|++  +++|+|.+|++.|.....|++|++..|+.
T Consensus        69 ~~~kPy~C~~Cgk~Fss~s~L~~H~r~h~~~~~C~~CgK~F~~~~sL~~H~~~~h~~  125 (128)
T PHA00733         69 KAVSPYVCPLCLMPFSSSVSLKQHIRYTEHSKVCPVCGKEFRNTDSTLDHVCKKHNI  125 (128)
T ss_pred             CCCCCccCCCCCCcCCCHHHHHHHHhcCCcCccCCCCCCccCCHHHHHHHHHHhcCc
Confidence            356778 9999999999999999998  78999999999999999999999888763

>KOG3608 consensus Zn finger proteins [General function prediction only]

Probab=98.50  E-value=5.2e-08  Score=97.44  Aligned_cols=95  Identities=20%  Similarity=0.331  Sum_probs=69.1

Q ss_pred             CCCccc-cCccCcccCChHHHHHHhh------ccccccccccCccCCchhhHhhhhhhccCcccccCCCC----------
Q 015460            8 VSSKVW-CYYCDREFDDEKILVQHQK------AKHFKCHVCHKKLSTAGGMAIHVLQVHKENVTKVPNAK----------   70 (406)
Q Consensus         8 ~gEKp~-C~~CgK~Fs~ks~Lk~H~R------EKPfkC~~CgksFss~s~LkrH~rthHgek~~~Cp~~~----------   70 (406)
                      .+||.. |.+||+-|+++..|-.|.|      ..+|.|..|.|+|.++..|+.|+++|-.  .|+|+.|.          
T Consensus       203 s~eKvvACp~Cg~~F~~~tkl~DH~rRqt~l~~n~fqC~~C~KrFaTeklL~~Hv~rHvn--~ykCplCdmtc~~~ssL~  280 (467)
T KOG3608|consen  203 SNEKVVACPHCGELFRTKTKLFDHLRRQTELNTNSFQCAQCFKRFATEKLLKSHVVRHVN--CYKCPLCDMTCSSASSLT  280 (467)
T ss_pred             CCCeEEecchHHHHhccccHHHHHHHhhhhhcCCchHHHHHHHHHhHHHHHHHHHHHhhh--cccccccccCCCChHHHH
Confidence            467776 8888888888888888876      5678888888888888888888766643  46777531          


Q ss_pred             -------CCCCccceeecCCCCCCHhHHHHHhhhccCCCCc
Q 015460           71 -------PGRESTDIEIYGMQGIPPDVLAAHYGEEEEVPSK  104 (406)
Q Consensus        71 -------~~r~s~~c~iCG~~fi~~~~L~~H~k~he~~~sk  104 (406)
                             ...+.|+|+.|...+..+.+|.+|...|.+....
T Consensus       281 ~H~r~rHs~dkpfKCd~Cd~~c~~esdL~kH~~~HS~~~y~  321 (467)
T KOG3608|consen  281 THIRYRHSKDKPFKCDECDTRCVRESDLAKHVQVHSKTVYQ  321 (467)
T ss_pred             HHHHhhhccCCCccccchhhhhccHHHHHHHHHhcccccee
Confidence                   2245678888888888888888888777654333

>PHA02768 hypothetical protein; Provisional

Probab=98.48  E-value=5.6e-08  Score=73.43  Aligned_cols=39  Identities=18%  Similarity=0.425  Sum_probs=32.7

Q ss_pred             cCccCcccCChHHHHHHhh--ccccccccccCccCCchhhH
Q 015460           14 CYYCDREFDDEKILVQHQK--AKHFKCHVCHKKLSTAGGMA   52 (406)
Q Consensus        14 C~~CgK~Fs~ks~Lk~H~R--EKPfkC~~CgksFss~s~Lk   52 (406)
                      |++|||.|.+.++|.+|+|  .|+|+|..|++.|.+.+.|.
T Consensus         8 C~~CGK~Fs~~~~L~~H~r~H~k~~kc~~C~k~f~~~s~l~   48 (55)
T PHA02768          8 CPICGEIYIKRKSMITHLRKHNTNLKLSNCKRISLRTGEYI   48 (55)
T ss_pred             cchhCCeeccHHHHHHHHHhcCCcccCCcccceecccceeE
Confidence            8888888888888888888  67888888888888877765

>KOG3608 consensus Zn finger proteins [General function prediction only]

Probab=98.32  E-value=6.3e-07  Score=89.83  Aligned_cols=83  Identities=20%  Similarity=0.280  Sum_probs=65.5

Q ss_pred             cCccCcccCChHHHHHHhh-----ccccccccccCccCCchhhHhhhhhhccCcccccCC--CC----------------
Q 015460           14 CYYCDREFDDEKILVQHQK-----AKHFKCHVCHKKLSTAGGMAIHVLQVHKENVTKVPN--AK----------------   70 (406)
Q Consensus        14 C~~CgK~Fs~ks~Lk~H~R-----EKPfkC~~CgksFss~s~LkrH~rthHgek~~~Cp~--~~----------------   70 (406)
                      |..|+.+....+.|.+|+|     +|+|||+.|++.|.+.++|.+|...| .+..|.|..  |.                
T Consensus       266 CplCdmtc~~~ssL~~H~r~rHs~dkpfKCd~Cd~~c~~esdL~kH~~~H-S~~~y~C~h~~C~~s~r~~~q~~~H~~ev  344 (467)
T KOG3608|consen  266 CPLCDMTCSSASSLTTHIRYRHSKDKPFKCDECDTRCVRESDLAKHVQVH-SKTVYQCEHPDCHYSVRTYTQMRRHFLEV  344 (467)
T ss_pred             ccccccCCCChHHHHHHHHhhhccCCCccccchhhhhccHHHHHHHHHhc-cccceecCCCCCcHHHHHHHHHHHHHHHh
Confidence            7777777777777777777     89999999999999999999998644 477788876  31                


Q ss_pred             ---CCCCccceeecCCCCCCHhHHHHHhhh
Q 015460           71 ---PGRESTDIEIYGMQGIPPDVLAAHYGE   97 (406)
Q Consensus        71 ---~~r~s~~c~iCG~~fi~~~~L~~H~k~   97 (406)
                         .....|.|+.|.+-|..-..|.+|+..
T Consensus       345 hEg~np~~Y~CH~Cdr~ft~G~~L~~HL~k  374 (467)
T KOG3608|consen  345 HEGNNPILYACHCCDRFFTSGKSLSAHLMK  374 (467)
T ss_pred             ccCCCCCceeeecchhhhccchhHHHHHHH
Confidence               112347899999999999999999754

>KOG3993 consensus Transcription factor (contains Zn finger) [Transcription]

Probab=98.31  E-value=1.6e-07  Score=95.71  Aligned_cols=90  Identities=19%  Similarity=0.310  Sum_probs=69.3

Q ss_pred             c-cCccCcccCChHHHHHHhh----ccccccccccCccCCchhhHhhhhhhccCccccc--CC--CC-------------
Q 015460           13 W-CYYCDREFDDEKILVQHQK----AKHFKCHVCHKKLSTAGGMAIHVLQVHKENVTKV--PN--AK-------------   70 (406)
Q Consensus        13 ~-C~~CgK~Fs~ks~Lk~H~R----EKPfkC~~CgksFss~s~LkrH~rthHgek~~~C--p~--~~-------------   70 (406)
                      | |+.|...|.+...|.+|.-    ..-|+|.+|+|.|+...||..|.|.|. -+...-  ..  .+             
T Consensus       268 yiCqLCK~kYeD~F~LAQHrC~RIV~vEYrCPEC~KVFsCPANLASHRRWHK-PR~eaa~a~~~P~k~~~~~rae~~ea~  346 (500)
T KOG3993|consen  268 YICQLCKEKYEDAFALAQHRCPRIVHVEYRCPECDKVFSCPANLASHRRWHK-PRPEAAKAGSPPPKQAVETRAEVQEAE  346 (500)
T ss_pred             HHHHHHHHhhhhHHHHhhccCCeeEEeeecCCcccccccCchhhhhhhcccC-CchhhhhcCCCChhhhhhhhhhhhhcc
Confidence            5 9999999999999999965    456999999999999999999965554 322111  00  00             


Q ss_pred             -----CCCCccceeecCCCCCCHhHHHHHhhhccCCCC
Q 015460           71 -----PGRESTDIEIYGMQGIPPDVLAAHYGEEEEVPS  103 (406)
Q Consensus        71 -----~~r~s~~c~iCG~~fi~~~~L~~H~k~he~~~s  103 (406)
                           ....-|.|.+||+.|.++..|++|...|.....
T Consensus       347 rsg~dss~gi~~C~~C~KkFrRqAYLrKHqlthq~~~~  384 (500)
T KOG3993|consen  347 RSGDDSSSGIFSCHTCGKKFRRQAYLRKHQLTHQRAPL  384 (500)
T ss_pred             ccCCcccCceeecHHhhhhhHHHHHHHHhHHhhhcccc
Confidence                 111238999999999999999999998877333

>PLN03086 PRLI-interacting factor K; Provisional

Probab=98.27  E-value=9.8e-07  Score=94.34  Aligned_cols=58  Identities=17%  Similarity=0.315  Sum_probs=49.0

Q ss_pred             CCccc-cCccCcccCChHHHHHHhh--ccccccccccCccCCchhhHhhhhhhccCcccccCCC
Q 015460            9 SSKVW-CYYCDREFDDEKILVQHQK--AKHFKCHVCHKKLSTAGGMAIHVLQVHKENVTKVPNA   69 (406)
Q Consensus         9 gEKp~-C~~CgK~Fs~ks~Lk~H~R--EKPfkC~~CgksFss~s~LkrH~rthHgek~~~Cp~~   69 (406)
                      .++++ |++|++.|. ...|+.|++  .+++.|. |++.+ .+..|..|+++|..++.+.|..|
T Consensus       450 l~~H~~C~~Cgk~f~-~s~LekH~~~~Hkpv~Cp-Cg~~~-~R~~L~~H~~thCp~Kpi~C~fC  510 (567)
T PLN03086        450 AKNHVHCEKCGQAFQ-QGEMEKHMKVFHEPLQCP-CGVVL-EKEQMVQHQASTCPLRLITCRFC  510 (567)
T ss_pred             cccCccCCCCCCccc-hHHHHHHHHhcCCCccCC-CCCCc-chhHHHhhhhccCCCCceeCCCC
Confidence            45666 999999996 688999998  7899999 99765 67899999988888888888764

>PHA02768 hypothetical protein; Provisional

Probab=98.21  E-value=2.9e-07  Score=69.53  Aligned_cols=44  Identities=11%  Similarity=0.220  Sum_probs=34.4

Q ss_pred             ccccccccCccCCchhhHhhhhhhccCcccccCCCCCCCCccceeecCCCCCCHhHHH
Q 015460           35 HFKCHVCHKKLSTAGGMAIHVLQVHKENVTKVPNAKPGRESTDIEIYGMQGIPPDVLA   92 (406)
Q Consensus        35 PfkC~~CgksFss~s~LkrH~rthHgek~~~Cp~~~~~r~s~~c~iCG~~fi~~~~L~   92 (406)
                      -|+|++||+.|.+.++|.+|+|+|+  +.++            |..|++.|.....|.
T Consensus         5 ~y~C~~CGK~Fs~~~~L~~H~r~H~--k~~k------------c~~C~k~f~~~s~l~   48 (55)
T PHA02768          5 GYECPICGEIYIKRKSMITHLRKHN--TNLK------------LSNCKRISLRTGEYI   48 (55)
T ss_pred             ccCcchhCCeeccHHHHHHHHHhcC--Cccc------------CCcccceecccceeE
Confidence            4899999999999999999999987  3333            455667776665554

>PHA00616 hypothetical protein

Probab=97.94  E-value=2.7e-06  Score=61.55  Aligned_cols=33  Identities=24%  Similarity=0.465  Sum_probs=30.7

Q ss_pred             ccccccccCccCCchhhHhhhhhhccCcccccC
Q 015460           35 HFKCHVCHKKLSTAGGMAIHVLQVHKENVTKVP   67 (406)
Q Consensus        35 PfkC~~CgksFss~s~LkrH~rthHgek~~~Cp   67 (406)
                      +|+|..||+.|..+.+|++|++.||+++.+.|.
T Consensus         1 pYqC~~CG~~F~~~s~l~~H~r~~hg~~~~~~~   33 (44)
T PHA00616          1 MYQCLRCGGIFRKKKEVIEHLLSVHKQNKLTLE   33 (44)
T ss_pred             CCccchhhHHHhhHHHHHHHHHHhcCCCcccee
Confidence            689999999999999999999999999987775

>PHA00732 hypothetical protein

Probab=97.93  E-value=6.7e-06  Score=66.75  Aligned_cols=42  Identities=26%  Similarity=0.397  Sum_probs=35.3

Q ss_pred             cCccCcccCChHHHHHHhh--ccccccccccCccCCchhhHhhhhhh
Q 015460           14 CYYCDREFDDEKILVQHQK--AKHFKCHVCHKKLSTAGGMAIHVLQV   58 (406)
Q Consensus        14 C~~CgK~Fs~ks~Lk~H~R--EKPfkC~~CgksFss~s~LkrH~rth   58 (406)
                      |.+||+.|.+...|++|++  ..++.|.+|+++|.   .|..|.+++
T Consensus         4 C~~Cgk~F~s~s~Lk~H~r~~H~~~~C~~CgKsF~---~l~~H~~~~   47 (79)
T PHA00732          4 CPICGFTTVTLFALKQHARRNHTLTKCPVCNKSYR---RLNQHFYSQ   47 (79)
T ss_pred             CCCCCCccCCHHHHHHHhhcccCCCccCCCCCEeC---Chhhhhccc
Confidence            9999999999999999986  56788999999998   478887544

>PHA00732 hypothetical protein

Probab=97.72  E-value=1.8e-05  Score=64.30  Aligned_cols=49  Identities=20%  Similarity=0.259  Sum_probs=39.1

Q ss_pred             ccccccccCccCCchhhHhhhhhhccCcccccCCCCCCCCccceeecCCCCCCHhHHHHHhhhccC
Q 015460           35 HFKCHVCHKKLSTAGGMAIHVLQVHKENVTKVPNAKPGRESTDIEIYGMQGIPPDVLAAHYGEEEE  100 (406)
Q Consensus        35 PfkC~~CgksFss~s~LkrH~rthHgek~~~Cp~~~~~r~s~~c~iCG~~fi~~~~L~~H~k~he~  100 (406)
                      +|+|.+|++.|.+..+|++|++.+|..              +.|+.||+.|.   .|..|.+.+.|
T Consensus         1 py~C~~Cgk~F~s~s~Lk~H~r~~H~~--------------~~C~~CgKsF~---~l~~H~~~~~~   49 (79)
T PHA00732          1 MFKCPICGFTTVTLFALKQHARRNHTL--------------TKCPVCNKSYR---RLNQHFYSQYD   49 (79)
T ss_pred             CccCCCCCCccCCHHHHHHHhhcccCC--------------CccCCCCCEeC---ChhhhhcccCC
Confidence            589999999999999999999754431              24788999987   47788766554

>KOG3993 consensus Transcription factor (contains Zn finger) [Transcription]

Probab=97.64  E-value=1.5e-05  Score=81.74  Aligned_cols=48  Identities=29%  Similarity=0.599  Sum_probs=43.3

Q ss_pred             cCccCcccCChHHHHHHhh----------------cc---------------------ccccccccCccCCchhhHhhhh
Q 015460           14 CYYCDREFDDEKILVQHQK----------------AK---------------------HFKCHVCHKKLSTAGGMAIHVL   56 (406)
Q Consensus        14 C~~CgK~Fs~ks~Lk~H~R----------------EK---------------------PfkC~~CgksFss~s~LkrH~r   56 (406)
                      |.+|+|.|+.-.+|..|+|                ++                     -|.|.+|+|+|.+...|+.|+.
T Consensus       298 CPEC~KVFsCPANLASHRRWHKPR~eaa~a~~~P~k~~~~~rae~~ea~rsg~dss~gi~~C~~C~KkFrRqAYLrKHql  377 (500)
T KOG3993|consen  298 CPECDKVFSCPANLASHRRWHKPRPEAAKAGSPPPKQAVETRAEVQEAERSGDDSSSGIFSCHTCGKKFRRQAYLRKHQL  377 (500)
T ss_pred             CCcccccccCchhhhhhhcccCCchhhhhcCCCChhhhhhhhhhhhhccccCCcccCceeecHHhhhhhHHHHHHHHhHH
Confidence            9999999999999999988                11                     2889999999999999999998


Q ss_pred             hhccC
Q 015460           57 QVHKE   61 (406)
Q Consensus        57 thHge   61 (406)
                      +||..
T Consensus       378 thq~~  382 (500)
T KOG3993|consen  378 THQRA  382 (500)
T ss_pred             hhhcc
Confidence            98854

>COG5189 SFP1 Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division and chromosome partitioning]

Probab=97.57  E-value=2.1e-05  Score=78.16  Aligned_cols=64  Identities=23%  Similarity=0.398  Sum_probs=39.7

Q ss_pred             cccccccc--ccCccCCchhhHhhhhhhc-cCcccccCC------CCCCCCccceeecCCCCCCHhHHHHHhh
Q 015460           33 AKHFKCHV--CHKKLSTAGGMAIHVLQVH-KENVTKVPN------AKPGRESTDIEIYGMQGIPPDVLAAHYG   96 (406)
Q Consensus        33 EKPfkC~~--CgksFss~s~LkrH~rthH-gek~~~Cp~------~~~~r~s~~c~iCG~~fi~~~~L~~H~k   96 (406)
                      +|||||.+  |.|+++....|+.|++.-| ..+...-+.      =....+.|.|++|++++....-|+-|.+
T Consensus       347 ~KpykCpV~gC~K~YknqnGLKYH~lhGH~~~~~~~~p~p~~~~~F~~~~KPYrCevC~KRYKNlNGLKYHr~  419 (423)
T COG5189         347 GKPYKCPVEGCNKKYKNQNGLKYHMLHGHQNQKLHENPSPEKMNIFSAKDKPYRCEVCDKRYKNLNGLKYHRK  419 (423)
T ss_pred             CceecCCCCCchhhhccccchhhhhhccccCcccCCCCCccccccccccCCceeccccchhhccCccceeccc
Confidence            57788877  7788877777777764333 111111111      1234677777788877777777776665

>PF05605 zf-Di19: Drought induced 19 protein (Di19), zinc-binding; InterPro: IPR008598 This entry consists of several drought induced 19 (Di19) like and RING finger 114 proteins

Probab=97.45  E-value=0.00014  Score=54.54  Aligned_cols=46  Identities=28%  Similarity=0.701  Sum_probs=36.1

Q ss_pred             cccCccCcccCChHHHHHHhh------ccccccccccCccCCchhhHhhhhhhcc
Q 015460           12 VWCYYCDREFDDEKILVQHQK------AKHFKCHVCHKKLSTAGGMAIHVLQVHK   60 (406)
Q Consensus        12 p~C~~CgK~Fs~ks~Lk~H~R------EKPfkC~~CgksFss~s~LkrH~rthHg   60 (406)
                      +.|.+|++.|+ ...|..|..      .+.+.|.+|.+.+.  .+|.+|++.+|+
T Consensus         3 f~CP~C~~~~~-~~~L~~H~~~~H~~~~~~v~CPiC~~~~~--~~l~~Hl~~~H~   54 (54)
T PF05605_consen    3 FTCPYCGKGFS-ESSLVEHCEDEHRSESKNVVCPICSSRVT--DNLIRHLNSQHR   54 (54)
T ss_pred             cCCCCCCCccC-HHHHHHHHHhHCcCCCCCccCCCchhhhh--hHHHHHHHHhcC
Confidence            44999999544 578999976      46789999998755  489999988774

Di19 has been found to be strongly expressed in both the roots and leaves of Arabidopsis thaliana during progressive drought [], whilst RING finger proteins are thought to play a role in spermatogenesis. The precise function is unknown.

>PF13465 zf-H2C2_2: Zinc-finger double domain; PDB: 2EN7_A 1TF6_A 1TF3_A 2ELT_A 2EOS_A 2EN2_A 2DMD_A 2WBS_A 2WBU_A 2EM5_A

Probab=97.41  E-value=6.6e-05  Score=48.21  Aligned_cols=21  Identities=38%  Similarity=0.725  Sum_probs=14.6

Q ss_pred             HHHHHhh----ccccccccccCccC
Q 015460           26 ILVQHQK----AKHFKCHVCHKKLS   46 (406)
Q Consensus        26 ~Lk~H~R----EKPfkC~~CgksFs   46 (406)
                      +|++|++    ||+|+|++|+++|.
T Consensus         1 ~l~~H~~~H~~~k~~~C~~C~k~F~   25 (26)
T PF13465_consen    1 NLRRHMRTHTGEKPYKCPYCGKSFS   25 (26)
T ss_dssp             HHHHHHHHHSSSSSEEESSSSEEES
T ss_pred             CHHHHhhhcCCCCCCCCCCCcCeeC
Confidence            3556665    77777777777775

...

>KOG2893 consensus Zn finger protein [General function prediction only]

Probab=97.33  E-value=0.0027  Score=61.27  Aligned_cols=54  Identities=33%  Similarity=0.447  Sum_probs=40.9

Q ss_pred             CCCCCCCCCCCCCCCcccCCCCCCCCCCceEEEEEcccccChHHHhhccCceee
Q 015460          291 ASGPNTGGPSIGPPPVIANKAPATQPAVNEVYLVWEDEAMSMEERRMSSVKYQV  344 (406)
Q Consensus       291 ~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  344 (406)
                      ++...|+.++.+.+.++...-+++--++.-.-|+-+||.+|.||||+.|+|||-
T Consensus       283 ~sttsttnsta~kpaasitskpatltttsatklihpdedisleerraqlpkyqr  336 (341)
T KOG2893|consen  283 ESTTSTTNSTAGKPAASITSKPATLTTTSATKLIHPDEDISLEERRAQLPKYQR  336 (341)
T ss_pred             cccccCcccccccchhhhhcccceeccccceeeeCCcccccHHHHhhhhhhhhh
Confidence            344445555566666655555777766777789999999999999999999984

>PF00096 zf-C2H2: Zinc finger, C2H2 type; InterPro: IPR007087 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule

Probab=97.31  E-value=8.1e-05  Score=45.80  Aligned_cols=22  Identities=27%  Similarity=0.730  Sum_probs=17.1

Q ss_pred             cccccccCccCCchhhHhhhhh
Q 015460           36 FKCHVCHKKLSTAGGMAIHVLQ   57 (406)
Q Consensus        36 fkC~~CgksFss~s~LkrH~rt   57 (406)
                      |+|.+|++.|.++..|++|++.
T Consensus         1 y~C~~C~~~f~~~~~l~~H~~~   22 (23)
T PF00096_consen    1 YKCPICGKSFSSKSNLKRHMRR   22 (23)
T ss_dssp             EEETTTTEEESSHHHHHHHHHH
T ss_pred             CCCCCCCCccCCHHHHHHHHhH
Confidence            5778888888888888888765

Some of these domains bind zinc, but many do not; instead binding other metals such as iron, or no metal at all. For example, some family members form salt bridges to stabilise the finger-like folds. They were first identified as a DNA-binding motif in transcription factor TFIIIA from Xenopus laevis (African clawed frog), however they are now recognised to bind DNA, RNA, protein and/or lipid substrates [, , , , ]. Their binding properties depend on the amino acid sequence of the finger domains and of the linker between fingers, as well as on the higher-order structures and the number of fingers. Znf domains are often found in clusters, where fingers can have different binding specificities. There are many superfamilies of Znf motifs, varying in both sequence and structure. They display considerable versatility in binding modes, even between members of the same class (e.g. some bind DNA, others protein), suggesting that Znf motifs are stable scaffolds that have evolved specialised functions. For example, Znf-containing proteins function in gene transcription, translation, mRNA trafficking, cytoskeleton organisation, epithelial development, cell adhesion, protein folding, chromatin remodelling and zinc sensing, to name but a few []. Zinc-binding motifs are stable structures, and they rarely undergo conformational changes upon binding their target. The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger: #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C], where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter []. This entry represents the classical C2H2 zinc finger domain. More information about these proteins can be found at Protein of the Month: Zinc Fingers [].; GO: 0008270 zinc ion binding, 0005622 intracellular; PDB: 2D9H_A 2EPC_A 1SP1_A 1VA3_A 2WBT_B 2ELR_A 2YTP_A 2YTT_A 1VA1_A 2ELO_A ....

>PF13894 zf-C2H2_4: C2H2-type zinc finger; PDB: 2ELX_A 2EPP_A 2DLK_A 1X6H_A 2EOU_A 2EMB_A 2GQJ_A 2CSH_A 2WBT_B 2ELM_A

Probab=97.21  E-value=0.00015  Score=44.20  Aligned_cols=24  Identities=25%  Similarity=0.661  Sum_probs=18.6

Q ss_pred             cccccccCccCCchhhHhhhhhhc
Q 015460           36 FKCHVCHKKLSTAGGMAIHVLQVH   59 (406)
Q Consensus        36 fkC~~CgksFss~s~LkrH~rthH   59 (406)
                      |+|.+|++.|.+...|++|+++||
T Consensus         1 ~~C~~C~~~~~~~~~l~~H~~~~H   24 (24)
T PF13894_consen    1 FQCPICGKSFRSKSELRQHMRTHH   24 (24)
T ss_dssp             EE-SSTS-EESSHHHHHHHHHHHS
T ss_pred             CCCcCCCCcCCcHHHHHHHHHhhC
Confidence            678888888888888888888775

...

>PLN03086 PRLI-interacting factor K; Provisional

Probab=97.20  E-value=0.00033  Score=75.27  Aligned_cols=64  Identities=16%  Similarity=0.203  Sum_probs=45.8

Q ss_pred             ccccccccccCccCCchhhHhhhhhhccCcccccCCCC---------------CCCCccceeecCCCCCC----------
Q 015460           33 AKHFKCHVCHKKLSTAGGMAIHVLQVHKENVTKVPNAK---------------PGRESTDIEIYGMQGIP----------   87 (406)
Q Consensus        33 EKPfkC~~CgksFss~s~LkrH~rthHgek~~~Cp~~~---------------~~r~s~~c~iCG~~fi~----------   87 (406)
                      +++++|.+|++.|. ...|+.|++.||  +.+.|+ |.               ...+.+.|..|++.+..          
T Consensus       451 ~~H~~C~~Cgk~f~-~s~LekH~~~~H--kpv~Cp-Cg~~~~R~~L~~H~~thCp~Kpi~C~fC~~~v~~g~~~~d~~d~  526 (567)
T PLN03086        451 KNHVHCEKCGQAFQ-QGEMEKHMKVFH--EPLQCP-CGVVLEKEQMVQHQASTCPLRLITCRFCGDMVQAGGSAMDVRDR  526 (567)
T ss_pred             ccCccCCCCCCccc-hHHHHHHHHhcC--CCccCC-CCCCcchhHHHhhhhccCCCCceeCCCCCCccccCccccchhhh
Confidence            45689999999996 688999999987  567786 41               12344678889888741          


Q ss_pred             HhHHHHHhhhccC
Q 015460           88 PDVLAAHYGEEEE  100 (406)
Q Consensus        88 ~~~L~~H~k~he~  100 (406)
                      ...|..|+..+..
T Consensus       527 ~s~Lt~HE~~CG~  539 (567)
T PLN03086        527 LRGMSEHESICGS  539 (567)
T ss_pred             hhhHHHHHHhcCC
Confidence            2367788776543

>PF12756 zf-C2H2_2: C2H2 type zinc-finger (2 copies); PDB: 2DMI_A

Probab=97.07  E-value=0.00024  Score=57.71  Aligned_cols=72  Identities=21%  Similarity=0.279  Sum_probs=17.9

Q ss_pred             cCccCcccCChHHHHHHhh-ccccccccccCccCCchhhHhhhhhhccCcccccCCCCCCCCccceeecCCCCCCHhHHH
Q 015460           14 CYYCDREFDDEKILVQHQK-AKHFKCHVCHKKLSTAGGMAIHVLQVHKENVTKVPNAKPGRESTDIEIYGMQGIPPDVLA   92 (406)
Q Consensus        14 C~~CgK~Fs~ks~Lk~H~R-EKPfkC~~CgksFss~s~LkrH~rthHgek~~~Cp~~~~~r~s~~c~iCG~~fi~~~~L~   92 (406)
                      |.+|+..|.....|..|++ ...+... ..+.+.....|..+.+.             .....+.|.+|++.|.....|.
T Consensus         2 C~~C~~~f~~~~~l~~H~~~~H~~~~~-~~~~l~~~~~~~~~~~~-------------~~~~~~~C~~C~~~f~s~~~l~   67 (100)
T PF12756_consen    2 CLFCDESFSSVDDLLQHMKKKHGFDIP-DQKYLVDPNRLLNYLRK-------------KVKESFRCPYCNKTFRSREALQ   67 (100)
T ss_dssp             -------------------------------------------------------------SSEEBSSSS-EESSHHHHH
T ss_pred             ccccccccccccccccccccccccccc-ccccccccccccccccc-------------ccCCCCCCCccCCCCcCHHHHH
Confidence            7778888888888888776 1111111 11112222222222211             1223567777777777777888


Q ss_pred             HHhhhcc
Q 015460           93 AHYGEEE   99 (406)
Q Consensus        93 ~H~k~he   99 (406)
                      .|++.+.
T Consensus        68 ~Hm~~~~   74 (100)
T PF12756_consen   68 EHMRSKH   74 (100)
T ss_dssp             HHHHHTT
T ss_pred             HHHcCcc
Confidence            8877543

>PF13912 zf-C2H2_6: C2H2-type zinc finger; PDB: 1JN7_A 1FU9_A 2L1O_A 1NJQ_A 2EN8_A 2EMM_A 1FV5_A 1Y0J_B 2L6Z_B

Probab=96.95  E-value=0.00033  Score=44.75  Aligned_cols=26  Identities=23%  Similarity=0.443  Sum_probs=21.9

Q ss_pred             ccccccccCccCCchhhHhhhhhhcc
Q 015460           35 HFKCHVCHKKLSTAGGMAIHVLQVHK   60 (406)
Q Consensus        35 PfkC~~CgksFss~s~LkrH~rthHg   60 (406)
                      +|+|.+|++.|.+...|..|++.|++
T Consensus         1 ~~~C~~C~~~F~~~~~l~~H~~~h~~   26 (27)
T PF13912_consen    1 PFECDECGKTFSSLSALREHKRSHCS   26 (27)
T ss_dssp             SEEETTTTEEESSHHHHHHHHCTTTT
T ss_pred             CCCCCccCCccCChhHHHHHhHHhcC
Confidence            57899999999999999999877753

>PHA00616 hypothetical protein

Probab=96.66  E-value=0.00072  Score=49.03  Aligned_cols=29  Identities=17%  Similarity=0.458  Sum_probs=26.4

Q ss_pred             c-cCccCcccCChHHHHHHhh----ccccccccc
Q 015460           13 W-CYYCDREFDDEKILVQHQK----AKHFKCHVC   41 (406)
Q Consensus        13 ~-C~~CgK~Fs~ks~Lk~H~R----EKPfkC~~C   41 (406)
                      | |..||+.|..++.|++|++    ++++.|+.-
T Consensus         2 YqC~~CG~~F~~~s~l~~H~r~~hg~~~~~~~~~   35 (44)
T PHA00616          2 YQCLRCGGIFRKKKEVIEHLLSVHKQNKLTLEYF   35 (44)
T ss_pred             CccchhhHHHhhHHHHHHHHHHhcCCCccceeEE
Confidence            5 9999999999999999998    889998763

>COG5189 SFP1 Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division and chromosome partitioning]

Probab=96.40  E-value=0.0011  Score=66.19  Aligned_cols=48  Identities=25%  Similarity=0.651  Sum_probs=43.6

Q ss_pred             CCCccc-cCc--cCcccCChHHHHHHhh-----------------------ccccccccccCccCCchhhHhhh
Q 015460            8 VSSKVW-CYY--CDREFDDEKILVQHQK-----------------------AKHFKCHVCHKKLSTAGGMAIHV   55 (406)
Q Consensus         8 ~gEKp~-C~~--CgK~Fs~ks~Lk~H~R-----------------------EKPfkC~~CgksFss~s~LkrH~   55 (406)
                      .++|+| |.+  |+|.++...-||-|+.                       +|||.|++|+|+++....|+.|+
T Consensus       345 ~d~KpykCpV~gC~K~YknqnGLKYH~lhGH~~~~~~~~p~p~~~~~F~~~~KPYrCevC~KRYKNlNGLKYHr  418 (423)
T COG5189         345 KDGKPYKCPVEGCNKKYKNQNGLKYHMLHGHQNQKLHENPSPEKMNIFSAKDKPYRCEVCDKRYKNLNGLKYHR  418 (423)
T ss_pred             ecCceecCCCCCchhhhccccchhhhhhccccCcccCCCCCccccccccccCCceeccccchhhccCccceecc
Confidence            467999 987  9999999999999976                       59999999999999999999995

>PF00096 zf-C2H2: Zinc finger, C2H2 type; InterPro: IPR007087 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule

Probab=96.39  E-value=0.0018  Score=39.67  Aligned_cols=19  Identities=26%  Similarity=0.705  Sum_probs=18.3

Q ss_pred             cCccCcccCChHHHHHHhh
Q 015460           14 CYYCDREFDDEKILVQHQK   32 (406)
Q Consensus        14 C~~CgK~Fs~ks~Lk~H~R   32 (406)
                      |.+|++.|.++..|++|++
T Consensus         3 C~~C~~~f~~~~~l~~H~~   21 (23)
T PF00096_consen    3 CPICGKSFSSKSNLKRHMR   21 (23)
T ss_dssp             ETTTTEEESSHHHHHHHHH
T ss_pred             CCCCCCccCCHHHHHHHHh
Confidence            9999999999999999985

Some of these domains bind zinc, but many do not; instead binding other metals such as iron, or no metal at all. For example, some family members form salt bridges to stabilise the finger-like folds. They were first identified as a DNA-binding motif in transcription factor TFIIIA from Xenopus laevis (African clawed frog), however they are now recognised to bind DNA, RNA, protein and/or lipid substrates [, , , , ]. Their binding properties depend on the amino acid sequence of the finger domains and of the linker between fingers, as well as on the higher-order structures and the number of fingers. Znf domains are often found in clusters, where fingers can have different binding specificities. There are many superfamilies of Znf motifs, varying in both sequence and structure. They display considerable versatility in binding modes, even between members of the same class (e.g. some bind DNA, others protein), suggesting that Znf motifs are stable scaffolds that have evolved specialised functions. For example, Znf-containing proteins function in gene transcription, translation, mRNA trafficking, cytoskeleton organisation, epithelial development, cell adhesion, protein folding, chromatin remodelling and zinc sensing, to name but a few []. Zinc-binding motifs are stable structures, and they rarely undergo conformational changes upon binding their target. The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger: #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C], where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter []. This entry represents the classical C2H2 zinc finger domain. More information about these proteins can be found at Protein of the Month: Zinc Fingers [].; GO: 0008270 zinc ion binding, 0005622 intracellular; PDB: 2D9H_A 2EPC_A 1SP1_A 1VA3_A 2WBT_B 2ELR_A 2YTP_A 2YTT_A 1VA1_A 2ELO_A ....

>PF12756 zf-C2H2_2: C2H2 type zinc-finger (2 copies); PDB: 2DMI_A

Probab=96.34  E-value=0.0015  Score=52.93  Aligned_cols=23  Identities=22%  Similarity=0.619  Sum_probs=16.1

Q ss_pred             ccccccccCccCCchhhHhhhhh
Q 015460           35 HFKCHVCHKKLSTAGGMAIHVLQ   57 (406)
Q Consensus        35 PfkC~~CgksFss~s~LkrH~rt   57 (406)
                      .+.|.+|++.|.+...|+.|++.
T Consensus        50 ~~~C~~C~~~f~s~~~l~~Hm~~   72 (100)
T PF12756_consen   50 SFRCPYCNKTFRSREALQEHMRS   72 (100)
T ss_dssp             SEEBSSSS-EESSHHHHHHHHHH
T ss_pred             CCCCCccCCCCcCHHHHHHHHcC
Confidence            47777777777777777777743

>PF09237 GAGA: GAGA factor; InterPro: IPR015318 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule

Probab=96.31  E-value=0.0015  Score=48.80  Aligned_cols=31  Identities=13%  Similarity=0.288  Sum_probs=23.6

Q ss_pred             ccccccccccCccCCchhhHhhhhhhccCcc
Q 015460           33 AKHFKCHVCHKKLSTAGGMAIHVLQVHKENV   63 (406)
Q Consensus        33 EKPfkC~~CgksFss~s~LkrH~rthHgek~   63 (406)
                      ++|..|.+|+..+.+..+|++|++.+|+.|+
T Consensus        22 ~~PatCP~C~a~~~~srnLrRHle~~H~~k~   52 (54)
T PF09237_consen   22 EQPATCPICGAVIRQSRNLRRHLEIRHFKKP   52 (54)
T ss_dssp             S--EE-TTT--EESSHHHHHHHHHHHTTTS-
T ss_pred             CCCCCCCcchhhccchhhHHHHHHHHhcccC
Confidence            8999999999999999999999999998774

Some of these domains bind zinc, but many do not; instead binding other metals such as iron, or no metal at all. For example, some family members form salt bridges to stabilise the finger-like folds. They were first identified as a DNA-binding motif in transcription factor TFIIIA from Xenopus laevis (African clawed frog), however they are now recognised to bind DNA, RNA, protein and/or lipid substrates [, , , , ]. Their binding properties depend on the amino acid sequence of the finger domains and of the linker between fingers, as well as on the higher-order structures and the number of fingers. Znf domains are often found in clusters, where fingers can have different binding specificities. There are many superfamilies of Znf motifs, varying in both sequence and structure. They display considerable versatility in binding modes, even between members of the same class (e.g. some bind DNA, others protein), suggesting that Znf motifs are stable scaffolds that have evolved specialised functions. For example, Znf-containing proteins function in gene transcription, translation, mRNA trafficking, cytoskeleton organisation, epithelial development, cell adhesion, protein folding, chromatin remodelling and zinc sensing, to name but a few []. Zinc-binding motifs are stable structures, and they rarely undergo conformational changes upon binding their target. Members of this entry bind to a 5'-GAGAG-3' DNA consensus binding site, and contain a Cys2-His2 zinc finger core as well as an N-terminal extension containing two highly basic regions. The zinc finger core binds in the DNA major groove and recognises the first three GAG bases of the consensus in a manner similar to that seen in other classical zinc finger-DNA complexes. The second basic region forms a helix that interacts in the major groove recognising the last G of the consensus, while the first basic region wraps around the DNA in the minor groove and recognises the A in the fourth position of the consensus sequence []. More information about these proteins can be found at Protein of the Month: Zinc Fingers [].; PDB: 1YUI_A 1YUJ_A.

>smart00355 ZnF_C2H2 zinc finger

Probab=96.19  E-value=0.003  Score=38.60  Aligned_cols=23  Identities=17%  Similarity=0.509  Sum_probs=18.4

Q ss_pred             cccccccCccCCchhhHhhhhhh
Q 015460           36 FKCHVCHKKLSTAGGMAIHVLQV   58 (406)
Q Consensus        36 fkC~~CgksFss~s~LkrH~rth   58 (406)
                      |+|..|++.|.....|..|++.|
T Consensus         1 ~~C~~C~~~f~~~~~l~~H~~~H   23 (26)
T smart00355        1 YRCPECGKVFKSKSALKEHMRTH   23 (26)
T ss_pred             CCCCCCcchhCCHHHHHHHHHHh
Confidence            57888888888888888887644

>KOG1924 consensus RhoA GTPase effector DIA/Diaphanous [Signal transduction mechanisms; Cytoskeleton]

Probab=96.05  E-value=0.082  Score=58.60  Aligned_cols=9  Identities=11%  Similarity=0.264  Sum_probs=4.0

Q ss_pred             CCCCCCCCC
Q 015460          242 PIPSTSIAL  250 (406)
Q Consensus       242 ~~~~~~~p~  250 (406)
                      +..|=+...
T Consensus       608 PvlP~gLkp  616 (1102)
T KOG1924|consen  608 PVLPFGLKP  616 (1102)
T ss_pred             ccCCCCCCc
Confidence            444444443

>PF05605 zf-Di19: Drought induced 19 protein (Di19), zinc-binding; InterPro: IPR008598 This entry consists of several drought induced 19 (Di19) like and RING finger 114 proteins

Probab=95.85  E-value=0.0088  Score=44.71  Aligned_cols=51  Identities=20%  Similarity=0.313  Sum_probs=37.0

Q ss_pred             ccccccccCccCCchhhHhhhhhhccCcccccCCCCCCCCccceeecCCCCCCHhHHHHHhhhc
Q 015460           35 HFKCHVCHKKLSTAGGMAIHVLQVHKENVTKVPNAKPGRESTDIEIYGMQGIPPDVLAAHYGEE   98 (406)
Q Consensus        35 PfkC~~CgksFss~s~LkrH~rthHgek~~~Cp~~~~~r~s~~c~iCG~~fi~~~~L~~H~k~h   98 (406)
                      -|.|.+|++ ..+...|..|....|...          ++.+.|.+|...+.  ..|..|+..+
T Consensus         2 ~f~CP~C~~-~~~~~~L~~H~~~~H~~~----------~~~v~CPiC~~~~~--~~l~~Hl~~~   52 (54)
T PF05605_consen    2 SFTCPYCGK-GFSESSLVEHCEDEHRSE----------SKNVVCPICSSRVT--DNLIRHLNSQ   52 (54)
T ss_pred             CcCCCCCCC-ccCHHHHHHHHHhHCcCC----------CCCccCCCchhhhh--hHHHHHHHHh
Confidence            489999999 455688999988877653          13566777776533  4888888754

Di19 has been found to be strongly expressed in both the roots and leaves of Arabidopsis thaliana during progressive drought [], whilst RING finger proteins are thought to play a role in spermatogenesis. The precise function is unknown.

>PF13465 zf-H2C2_2: Zinc-finger double domain; PDB: 2EN7_A 1TF6_A 1TF3_A 2ELT_A 2EOS_A 2EN2_A 2DMD_A 2WBS_A 2WBU_A 2EM5_A

Probab=95.56  E-value=0.0071  Score=38.73  Aligned_cols=19  Identities=21%  Similarity=0.218  Sum_probs=15.4

Q ss_pred             hhHhhhhhhccCcccccCC
Q 015460           50 GMAIHVLQVHKENVTKVPN   68 (406)
Q Consensus        50 ~LkrH~rthHgek~~~Cp~   68 (406)
                      +|++|+++|+++++|.|+.
T Consensus         1 ~l~~H~~~H~~~k~~~C~~   19 (26)
T PF13465_consen    1 NLRRHMRTHTGEKPYKCPY   19 (26)
T ss_dssp             HHHHHHHHHSSSSSEEESS
T ss_pred             CHHHHhhhcCCCCCCCCCC
Confidence            5899999999998766644

...

>PF13894 zf-C2H2_4: C2H2-type zinc finger; PDB: 2ELX_A 2EPP_A 2DLK_A 1X6H_A 2EOU_A 2EMB_A 2GQJ_A 2CSH_A 2WBT_B 2ELM_A

Probab=95.18  E-value=0.013  Score=35.39  Aligned_cols=19  Identities=32%  Similarity=0.709  Sum_probs=16.2

Q ss_pred             cCccCcccCChHHHHHHhh
Q 015460           14 CYYCDREFDDEKILVQHQK   32 (406)
Q Consensus        14 C~~CgK~Fs~ks~Lk~H~R   32 (406)
                      |.+|++.|.+...|++|++
T Consensus         3 C~~C~~~~~~~~~l~~H~~   21 (24)
T PF13894_consen    3 CPICGKSFRSKSELRQHMR   21 (24)
T ss_dssp             -SSTS-EESSHHHHHHHHH
T ss_pred             CcCCCCcCCcHHHHHHHHH
Confidence            9999999999999999985

...

>PF12171 zf-C2H2_jaz: Zinc-finger double-stranded RNA-binding; InterPro: IPR022755 This zinc finger is found in archaea and eukaryotes, and is approximately 30 amino acids in length

Probab=95.02  E-value=0.01  Score=38.04  Aligned_cols=20  Identities=45%  Similarity=0.841  Sum_probs=10.1

Q ss_pred             ccCccCcccCChHHHHHHhh
Q 015460           13 WCYYCDREFDDEKILVQHQK   32 (406)
Q Consensus        13 ~C~~CgK~Fs~ks~Lk~H~R   32 (406)
                      +|..|+|.|.....|+.|++
T Consensus         3 ~C~~C~k~f~~~~~~~~H~~   22 (27)
T PF12171_consen    3 YCDACDKYFSSENQLKQHMK   22 (27)
T ss_dssp             BBTTTTBBBSSHHHHHCCTT
T ss_pred             CcccCCCCcCCHHHHHHHHc
Confidence            35555555555555555543

The mammalian members of this group occur multiple times along the protein, joined by flexible linkers, and are referred to as JAZ - dsRNA-binding ZF protein - zinc-fingers. The JAZ proteins are expressed in all tissues tested and localise in the nucleus, particularly the nucleolus []. JAZ preferentially binds to double-stranded (ds) RNA or RNA/DNA hybrids rather than DNA. In addition to binding double-stranded RNA, these zinc-fingers are required for nucleolar localisation. This entry represents the multiple-adjacent-C2H2 zinc finger, JAZ. ; PDB: 4DGW_A 1ZR9_A.

>PF13909 zf-H2C2_5: C2H2-type zinc-finger domain; PDB: 1X5W_A

Probab=94.78  E-value=0.013  Score=36.34  Aligned_cols=24  Identities=25%  Similarity=0.527  Sum_probs=18.4

Q ss_pred             cccccccCccCCchhhHhhhhhhcc
Q 015460           36 FKCHVCHKKLSTAGGMAIHVLQVHK   60 (406)
Q Consensus        36 fkC~~CgksFss~s~LkrH~rthHg   60 (406)
                      |+|..|+.... +..|++|++.+|+
T Consensus         1 y~C~~C~y~t~-~~~l~~H~~~~H~   24 (24)
T PF13909_consen    1 YKCPHCSYSTS-KSNLKRHLKRHHP   24 (24)
T ss_dssp             EE-SSSS-EES-HHHHHHHHHHHHS
T ss_pred             CCCCCCCCcCC-HHHHHHHHHhhCc
Confidence            68999998887 8899999988774

>KOG3671 consensus Actin regulatory protein (Wiskott-Aldrich syndrome protein) [Signal transduction mechanisms; Cytoskeleton]

Probab=94.59  E-value=2.7  Score=44.95  Aligned_cols=18  Identities=22%  Similarity=0.257  Sum_probs=13.8

Q ss_pred             hHHHhhccCceeeecccc
Q 015460          332 MEERRMSSVKYQVHDETS  349 (406)
Q Consensus       332 ~~~~~~~~~~~~~~~~~~  349 (406)
                      |++|||+|=+..-.||-+
T Consensus       541 m~ara~a~~i~~tkd~de  558 (569)
T KOG3671|consen  541 MDARASALAIHSTKDEDE  558 (569)
T ss_pred             HHHHHHhhcccccccccc
Confidence            899999999888544433

>PF12874 zf-met: Zinc-finger of C2H2 type; PDB: 1ZU1_A 2KVG_A

Probab=94.45  E-value=0.016  Score=36.08  Aligned_cols=21  Identities=29%  Similarity=0.767  Sum_probs=13.6

Q ss_pred             cccccccCccCCchhhHhhhh
Q 015460           36 FKCHVCHKKLSTAGGMAIHVL   56 (406)
Q Consensus        36 fkC~~CgksFss~s~LkrH~r   56 (406)
                      |.|++|++.|.+...|+.|++
T Consensus         1 ~~C~~C~~~f~s~~~~~~H~~   21 (25)
T PF12874_consen    1 FYCDICNKSFSSENSLRQHLR   21 (25)
T ss_dssp             EEETTTTEEESSHHHHHHHHT
T ss_pred             CCCCCCCCCcCCHHHHHHHHC
Confidence            456666666666666666664

>PF13912 zf-C2H2_6: C2H2-type zinc finger; PDB: 1JN7_A 1FU9_A 2L1O_A 1NJQ_A 2EN8_A 2EMM_A 1FV5_A 1Y0J_B 2L6Z_B

Probab=94.31  E-value=0.025  Score=35.88  Aligned_cols=19  Identities=26%  Similarity=0.677  Sum_probs=18.3

Q ss_pred             cCccCcccCChHHHHHHhh
Q 015460           14 CYYCDREFDDEKILVQHQK   32 (406)
Q Consensus        14 C~~CgK~Fs~ks~Lk~H~R   32 (406)
                      |..|++.|.....|.+|++
T Consensus         4 C~~C~~~F~~~~~l~~H~~   22 (27)
T PF13912_consen    4 CDECGKTFSSLSALREHKR   22 (27)
T ss_dssp             ETTTTEEESSHHHHHHHHC
T ss_pred             CCccCCccCChhHHHHHhH
Confidence            9999999999999999986

>KOG2231 consensus Predicted E3 ubiquitin ligase [Posttranslational modification, protein turnover, chaperones]

Probab=94.01  E-value=0.057  Score=59.30  Aligned_cols=42  Identities=31%  Similarity=0.672  Sum_probs=25.1

Q ss_pred             cCccCcccCChHHHHHHhh--ccccccccccC---------ccCCchhhHhhhh
Q 015460           14 CYYCDREFDDEKILVQHQK--AKHFKCHVCHK---------KLSTAGGMAIHVL   56 (406)
Q Consensus        14 C~~CgK~Fs~ks~Lk~H~R--EKPfkC~~Cgk---------sFss~s~LkrH~r   56 (406)
                      |.+| -.|.....|+.|++  -+-+.|.+|-.         ...++..|.+|++
T Consensus       118 ~~~c-~~~~s~~~Lk~H~~~~H~~~~c~lC~~~~kif~~e~k~Yt~~el~~h~~  170 (669)
T KOG2231|consen  118 CLHC-TEFKSVENLKNHMRDQHKLHLCSLCLQNLKIFINERKLYTRAELNLHLM  170 (669)
T ss_pred             Cccc-cchhHHHHHHHHHHHhhhhhccccccccceeeeeeeehehHHHHHHHHh
Confidence            4444 34447888999987  45566666532         2334566777764

>COG5236 Uncharacterized conserved protein, contains RING Zn-finger [General function prediction only]

Probab=93.94  E-value=0.041  Score=55.83  Aligned_cols=72  Identities=19%  Similarity=0.335  Sum_probs=51.8

Q ss_pred             cCccCcccCChHHHHHHhhccccccccccCc-------cCCchhhHhhhhhhccCcccccCC--CCCCCCccceeecCCC
Q 015460           14 CYYCDREFDDEKILVQHQKAKHFKCHVCHKK-------LSTAGGMAIHVLQVHKENVTKVPN--AKPGRESTDIEIYGMQ   84 (406)
Q Consensus        14 C~~CgK~Fs~ks~Lk~H~REKPfkC~~Cgks-------Fss~s~LkrH~rthHgek~~~Cp~--~~~~r~s~~c~iCG~~   84 (406)
                      |.+|.+.|.+...|.+|+|+|.-+|.+|++.       |..-..|.+|-+.    ..|.|..  |..++.        -.
T Consensus       223 C~FC~~~FYdDDEL~~HcR~~HE~ChICD~v~p~~~QYFK~Y~~Le~HF~~----~hy~ct~qtc~~~k~--------~v  290 (493)
T COG5236         223 CIFCKIYFYDDDELRRHCRLRHEACHICDMVGPIRYQYFKSYEDLEAHFRN----AHYCCTFQTCRVGKC--------YV  290 (493)
T ss_pred             hhhccceecChHHHHHHHHhhhhhhhhhhccCccchhhhhCHHHHHHHhhc----CceEEEEEEEecCcE--------EE
Confidence            9999999999999999999777778888763       7788888888732    3355543  221111        34


Q ss_pred             CCCHhHHHHHhhh
Q 015460           85 GIPPDVLAAHYGE   97 (406)
Q Consensus        85 fi~~~~L~~H~k~   97 (406)
                      |.....|..|+..
T Consensus       291 f~~~~el~~h~~~  303 (493)
T COG5236         291 FPYHTELLEHLTR  303 (493)
T ss_pred             eccHHHHHHHHHH
Confidence            6777888888654

>KOG1924 consensus RhoA GTPase effector DIA/Diaphanous [Signal transduction mechanisms; Cytoskeleton]

Probab=93.92  E-value=0.21  Score=55.46  Aligned_cols=10  Identities=0%  Similarity=-0.091  Sum_probs=4.7

Q ss_pred             cccccccccc
Q 015460          370 DRPYVSCFQI  379 (406)
Q Consensus       370 ~~~~~~~~~~  379 (406)
                      |-||+++.+|
T Consensus       692 el~ilDsKta  701 (1102)
T KOG1924|consen  692 ELRILDSKTA  701 (1102)
T ss_pred             hheecchHHH
Confidence            3455555443

>PF12171 zf-C2H2_jaz: Zinc-finger double-stranded RNA-binding; InterPro: IPR022755 This zinc finger is found in archaea and eukaryotes, and is approximately 30 amino acids in length

Probab=93.81  E-value=0.027  Score=36.06  Aligned_cols=22  Identities=27%  Similarity=0.625  Sum_probs=19.9

Q ss_pred             cccccccCccCCchhhHhhhhh
Q 015460           36 FKCHVCHKKLSTAGGMAIHVLQ   57 (406)
Q Consensus        36 fkC~~CgksFss~s~LkrH~rt   57 (406)
                      |.|..|++.|.+...|..|++.
T Consensus         2 ~~C~~C~k~f~~~~~~~~H~~s   23 (27)
T PF12171_consen    2 FYCDACDKYFSSENQLKQHMKS   23 (27)
T ss_dssp             CBBTTTTBBBSSHHHHHCCTTS
T ss_pred             CCcccCCCCcCCHHHHHHHHcc
Confidence            7899999999999999999864

The mammalian members of this group occur multiple times along the protein, joined by flexible linkers, and are referred to as JAZ - dsRNA-binding ZF protein - zinc-fingers. The JAZ proteins are expressed in all tissues tested and localise in the nucleus, particularly the nucleolus []. JAZ preferentially binds to double-stranded (ds) RNA or RNA/DNA hybrids rather than DNA. In addition to binding double-stranded RNA, these zinc-fingers are required for nucleolar localisation. This entry represents the multiple-adjacent-C2H2 zinc finger, JAZ. ; PDB: 4DGW_A 1ZR9_A.

>smart00355 ZnF_C2H2 zinc finger

Probab=93.42  E-value=0.057  Score=32.71  Aligned_cols=19  Identities=26%  Similarity=0.672  Sum_probs=18.1

Q ss_pred             cCccCcccCChHHHHHHhh
Q 015460           14 CYYCDREFDDEKILVQHQK   32 (406)
Q Consensus        14 C~~CgK~Fs~ks~Lk~H~R   32 (406)
                      |..|++.|.....|..|++
T Consensus         3 C~~C~~~f~~~~~l~~H~~   21 (26)
T smart00355        3 CPECGKVFKSKSALKEHMR   21 (26)
T ss_pred             CCCCcchhCCHHHHHHHHH
Confidence            9999999999999999975

>PF12874 zf-met: Zinc-finger of C2H2 type; PDB: 1ZU1_A 2KVG_A

Probab=92.55  E-value=0.075  Score=33.01  Aligned_cols=20  Identities=35%  Similarity=0.851  Sum_probs=18.8

Q ss_pred             ccCccCcccCChHHHHHHhh
Q 015460           13 WCYYCDREFDDEKILVQHQK   32 (406)
Q Consensus        13 ~C~~CgK~Fs~ks~Lk~H~R   32 (406)
                      +|+.|++.|..+..|+.|++
T Consensus         2 ~C~~C~~~f~s~~~~~~H~~   21 (25)
T PF12874_consen    2 YCDICNKSFSSENSLRQHLR   21 (25)
T ss_dssp             EETTTTEEESSHHHHHHHHT
T ss_pred             CCCCCCCCcCCHHHHHHHHC
Confidence            49999999999999999986

>KOG2482 consensus Predicted C2H2-type Zn-finger protein [Transcription]

Probab=91.88  E-value=0.082  Score=53.62  Aligned_cols=91  Identities=19%  Similarity=0.353  Sum_probs=64.2

Q ss_pred             CccccCccCcccCChHHHHHHhh---------------------------------------------------------
Q 015460           10 SKVWCYYCDREFDDEKILVQHQK---------------------------------------------------------   32 (406)
Q Consensus        10 EKp~C~~CgK~Fs~ks~Lk~H~R---------------------------------------------------------   32 (406)
                      ++..|-+|.|.|..+..|+.|||                                                         
T Consensus       194 ~r~~CLyCekifrdkntLkeHMrkK~HrrinPknreYDkfyiINY~ev~ks~t~~~~e~dret~~d~~E~D~~wsDw~ed  273 (423)
T KOG2482|consen  194 ERLRCLYCEKIFRDKNTLKEHMRKKRHRRINPKNREYDKFYIINYLEVGKSWTIVHSEDDRETNEDINETDDTWSDWNED  273 (423)
T ss_pred             hhheeeeeccccCCcHHHHHHHHhccCcccCCCccccceEEEEeHhhcCCccchhhhhhhhhhhccccccccchhhhhcC
Confidence            34459999999999999999998                                                         


Q ss_pred             -ccc--cccccccCccCCchhhHhhhhhhccCcccccCCC---------------CCCCCccceeecCCCCCCHhHHHHH
Q 015460           33 -AKH--FKCHVCHKKLSTAGGMAIHVLQVHKENVTKVPNA---------------KPGRESTDIEIYGMQGIPPDVLAAH   94 (406)
Q Consensus        33 -EKP--fkC~~CgksFss~s~LkrH~rthHgek~~~Cp~~---------------~~~r~s~~c~iCG~~fi~~~~L~~H   94 (406)
                       +-.  .+|-.|.+..-....|..||+.+|.-.-.+-...               ........|-.|...|-.+..|..|
T Consensus       274 ~a~a~~v~CLfC~~~~en~~~l~eHmk~vHe~Dl~Ki~sd~~Ln~YqrvrviNyiRkq~~~~~c~~cd~~F~~e~~l~~h  353 (423)
T KOG2482|consen  274 DAEALSVVCLFCTNFYENPVFLFEHMKIVHEFDLLKIQSDYSLNFYQRVRVINYIRKQKKKSRCAECDLSFWKEPGLLIH  353 (423)
T ss_pred             CCCccceEEEeeccchhhHHHHHHHHHHHHHhhHHhhccccccchhhhhhHHHHHHHHhhccccccccccccCcchhhhh
Confidence             001  3788888888778889999988885332222110               0111234678888899999999999


Q ss_pred             hhhccC
Q 015460           95 YGEEEE  100 (406)
Q Consensus        95 ~k~he~  100 (406)
                      +..+..
T Consensus       354 m~e~k~  359 (423)
T KOG2482|consen  354 MVEDKH  359 (423)
T ss_pred             cccccc
Confidence            876543

>PF09237 GAGA: GAGA factor; InterPro: IPR015318 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule

Probab=91.33  E-value=0.17  Score=37.96  Aligned_cols=26  Identities=19%  Similarity=0.314  Sum_probs=18.1

Q ss_pred             CCCCccc-cCccCcccCChHHHHHHhh
Q 015460            7 RVSSKVW-CYYCDREFDDEKILVQHQK   32 (406)
Q Consensus         7 r~gEKp~-C~~CgK~Fs~ks~Lk~H~R   32 (406)
                      ...+.+. |.+|+..+.+..+|++|+.
T Consensus        19 ~~S~~PatCP~C~a~~~~srnLrRHle   45 (54)
T PF09237_consen   19 SQSEQPATCPICGAVIRQSRNLRRHLE   45 (54)
T ss_dssp             CTTS--EE-TTT--EESSHHHHHHHHH
T ss_pred             hccCCCCCCCcchhhccchhhHHHHHH
Confidence            3456666 9999999999999999986

Some of these domains bind zinc, but many do not; instead binding other metals such as iron, or no metal at all. For example, some family members form salt bridges to stabilise the finger-like folds. They were first identified as a DNA-binding motif in transcription factor TFIIIA from Xenopus laevis (African clawed frog), however they are now recognised to bind DNA, RNA, protein and/or lipid substrates [, , , , ]. Their binding properties depend on the amino acid sequence of the finger domains and of the linker between fingers, as well as on the higher-order structures and the number of fingers. Znf domains are often found in clusters, where fingers can have different binding specificities. There are many superfamilies of Znf motifs, varying in both sequence and structure. They display considerable versatility in binding modes, even between members of the same class (e.g. some bind DNA, others protein), suggesting that Znf motifs are stable scaffolds that have evolved specialised functions. For example, Znf-containing proteins function in gene transcription, translation, mRNA trafficking, cytoskeleton organisation, epithelial development, cell adhesion, protein folding, chromatin remodelling and zinc sensing, to name but a few []. Zinc-binding motifs are stable structures, and they rarely undergo conformational changes upon binding their target. Members of this entry bind to a 5'-GAGAG-3' DNA consensus binding site, and contain a Cys2-His2 zinc finger core as well as an N-terminal extension containing two highly basic regions. The zinc finger core binds in the DNA major groove and recognises the first three GAG bases of the consensus in a manner similar to that seen in other classical zinc finger-DNA complexes. The second basic region forms a helix that interacts in the major groove recognising the last G of the consensus, while the first basic region wraps around the DNA in the minor groove and recognises the A in the fourth position of the consensus sequence []. More information about these proteins can be found at Protein of the Month: Zinc Fingers [].; PDB: 1YUI_A 1YUJ_A.

>COG5048 FOG: Zn-finger [General function prediction only]

Probab=90.96  E-value=0.079  Score=52.47  Aligned_cols=54  Identities=24%  Similarity=0.428  Sum_probs=41.5

Q ss_pred             cCccCcccCChHHHHHHhh------c--cccccc--cccCccCCchhhHhhhhhhccCcccccC
Q 015460           14 CYYCDREFDDEKILVQHQK------A--KHFKCH--VCHKKLSTAGGMAIHVLQVHKENVTKVP   67 (406)
Q Consensus        14 C~~CgK~Fs~ks~Lk~H~R------E--KPfkC~--~CgksFss~s~LkrH~rthHgek~~~Cp   67 (406)
                      |..|.+.|.+...|.+|.+      +  +++.|.  .|++.|.+.+.|++|..+|.+.+.++|.
T Consensus       292 ~~~~~~~~s~~~~l~~~~~~~~h~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  355 (467)
T COG5048         292 SKQCNISFSRSSPLTRHLRSVNHSGESLKPFSCPYSLCGKLFSRNDALKRHILLHTSISPAKEK  355 (467)
T ss_pred             CccccCCccccccccccccccccccccCCceeeeccCCCccccccccccCCcccccCCCccccc
Confidence            8888888888888877765      5  788888  6888888888888888777776655554

>smart00451 ZnF_U1 U1-like zinc finger

Probab=90.94  E-value=0.18  Score=33.65  Aligned_cols=20  Identities=35%  Similarity=0.730  Sum_probs=11.8

Q ss_pred             ccCccCcccCChHHHHHHhh
Q 015460           13 WCYYCDREFDDEKILVQHQK   32 (406)
Q Consensus        13 ~C~~CgK~Fs~ks~Lk~H~R   32 (406)
                      +|+.|++.|.....++.|++
T Consensus         5 ~C~~C~~~~~~~~~~~~H~~   24 (35)
T smart00451        5 YCKLCNVTFTDEISVEAHLK   24 (35)
T ss_pred             EccccCCccCCHHHHHHHHC
Confidence            36666666666666666654

Family of C2H2-type zinc fingers, present in matrin, U1 small nuclear ribonucleoprotein C and other RNA-binding proteins.

>KOG1146 consensus Homeobox protein [General function prediction only]

Probab=90.38  E-value=0.12  Score=60.11  Aligned_cols=84  Identities=14%  Similarity=0.163  Sum_probs=62.4

Q ss_pred             cCccCcccCChHHHHHHhh-----ccccccccccCccCCchhhHhhhhhhccCcc-cccC-------CC-----CCCCCc
Q 015460           14 CYYCDREFDDEKILVQHQK-----AKHFKCHVCHKKLSTAGGMAIHVLQVHKENV-TKVP-------NA-----KPGRES   75 (406)
Q Consensus        14 C~~CgK~Fs~ks~Lk~H~R-----EKPfkC~~CgksFss~s~LkrH~rthHgek~-~~Cp-------~~-----~~~r~s   75 (406)
                      |.-|+..|.++..+..|+.     .|-|+|.+|+..|+....|-.|+|..|-+-. -.|-       .+     ......
T Consensus       439 ~~~~e~~~~s~r~~~~~t~~L~S~~kt~~cpkc~~~yk~a~~L~vhmRskhp~~~~~~c~~gq~~~~~arg~~~~~~~~p  518 (1406)
T KOG1146|consen  439 LTKAEPLLESKRSLEGQTVVLHSFFKTLKCPKCNWHYKLAQTLGVHMRSKHPESQSAYCKAGQNHPRLARGEVYRCPGKP  518 (1406)
T ss_pred             ccchhhhhhhhcccccceeeeecccccccCCccchhhhhHHHhhhcccccccccchhHhHhccccccccccccccCCCCc
Confidence            5556667777777777766     7889999999999999999999998654311 1221       11     112356


Q ss_pred             cceeecCCCCCCHhHHHHHhhh
Q 015460           76 TDIEIYGMQGIPPDVLAAHYGE   97 (406)
Q Consensus        76 ~~c~iCG~~fi~~~~L~~H~k~   97 (406)
                      +.|..|.-.+.....|..|++.
T Consensus       519 ~~C~~C~~stttng~LsihlqS  540 (1406)
T KOG1146|consen  519 YPCRACNYSTTTNGNLSIHLQS  540 (1406)
T ss_pred             ccceeeeeeeecchHHHHHHHH
Confidence            7899999999999999999874

>PRK04860 hypothetical protein; Provisional

Probab=88.86  E-value=0.25  Score=45.28  Aligned_cols=32  Identities=19%  Similarity=0.339  Sum_probs=25.2

Q ss_pred             cccccccccCccCCchhhHhhhhhhccCcccccCCC
Q 015460           34 KHFKCHVCHKKLSTAGGMAIHVLQVHKENVTKVPNA   69 (406)
Q Consensus        34 KPfkC~~CgksFss~s~LkrH~rthHgek~~~Cp~~   69 (406)
                      -+|+|. |++   ....+++|.++|.+++.|.|..|
T Consensus       118 ~~Y~C~-C~~---~~~~~rrH~ri~~g~~~YrC~~C  149 (160)
T PRK04860        118 FPYRCK-CQE---HQLTVRRHNRVVRGEAVYRCRRC  149 (160)
T ss_pred             EEEEcC-CCC---eeCHHHHHHHHhcCCccEECCCC
Confidence            368997 987   77788999999988887777553

>KOG2231 consensus Predicted E3 ubiquitin ligase [Posttranslational modification, protein turnover, chaperones]

Probab=88.48  E-value=0.35  Score=53.31  Aligned_cols=46  Identities=26%  Similarity=0.553  Sum_probs=27.7

Q ss_pred             cCccCcccCChHHHHHHhhccccccccccC------ccCCchhhHhhhhhhc
Q 015460           14 CYYCDREFDDEKILVQHQKAKHFKCHVCHK------KLSTAGGMAIHVLQVH   59 (406)
Q Consensus        14 C~~CgK~Fs~ks~Lk~H~REKPfkC~~Cgk------sFss~s~LkrH~rthH   59 (406)
                      |.+|...|-....|.+|++...|.|..|.+      -|..-++|..|-|.+|
T Consensus       185 C~~C~~~fld~~el~rH~~~~h~~chfC~~~~~~neyy~~~~dLe~HfR~~H  236 (669)
T KOG2231|consen  185 CKFCHERFLDDDELYRHLRFDHEFCHFCDYKTGQNEYYNDYDDLEEHFRKGH  236 (669)
T ss_pred             chhhhhhhccHHHHHHhhccceeheeecCcccccchhcccchHHHHHhhhcC
Confidence            666666666666666666655566666642      3455566666665444

>PF09538 FYDLN_acid: Protein of unknown function (FYDLN_acid); InterPro: IPR012644 Members of this family are bacterial proteins with a conserved motif [KR]FYDLN, sometimes flanked by a pair of CXXC motifs, followed by a long region of low complexity sequence in which roughly half the residues are Asp and Glu, including multiple runs of five or more acidic residues

Probab=88.12  E-value=0.3  Score=42.09  Aligned_cols=37  Identities=19%  Similarity=0.429  Sum_probs=28.8

Q ss_pred             CCCccccCccCcccCChHHHHHHhhccccccccccCccCCchhh
Q 015460            8 VSSKVWCYYCDREFDDEKILVQHQKAKHFKCHVCHKKLSTAGGM   51 (406)
Q Consensus         8 ~gEKp~C~~CgK~Fs~ks~Lk~H~REKPfkC~~CgksFss~s~L   51 (406)
                      .|.|..|..||++|....       ..|..|.+||..|.-...+
T Consensus         6 lGtKR~Cp~CG~kFYDLn-------k~PivCP~CG~~~~~~~~~   42 (108)
T PF09538_consen    6 LGTKRTCPSCGAKFYDLN-------KDPIVCPKCGTEFPPEPPL   42 (108)
T ss_pred             cCCcccCCCCcchhccCC-------CCCccCCCCCCccCccccc
Confidence            356666999999997643       5688999999999887333

The function of members of this family is unknown.

>PF13913 zf-C2HC_2: zinc-finger of a C2HC-type

Probab=87.18  E-value=0.43  Score=30.35  Aligned_cols=18  Identities=39%  Similarity=0.861  Sum_probs=13.2

Q ss_pred             cCccCcccCChHHHHHHhh
Q 015460           14 CYYCDREFDDEKILVQHQK   32 (406)
Q Consensus        14 C~~CgK~Fs~ks~Lk~H~R   32 (406)
                      |..||+.| ..+.|.+|++
T Consensus         5 C~~CgR~F-~~~~l~~H~~   22 (25)
T PF13913_consen    5 CPICGRKF-NPDRLEKHEK   22 (25)
T ss_pred             CCCCCCEE-CHHHHHHHHH
Confidence            78888888 5667777754

>smart00451 ZnF_U1 U1-like zinc finger

Probab=86.82  E-value=0.39  Score=32.01  Aligned_cols=23  Identities=17%  Similarity=0.485  Sum_probs=19.7

Q ss_pred             ccccccccCccCCchhhHhhhhh
Q 015460           35 HFKCHVCHKKLSTAGGMAIHVLQ   57 (406)
Q Consensus        35 PfkC~~CgksFss~s~LkrH~rt   57 (406)
                      .|.|++|++.|.....++.|++.
T Consensus         3 ~~~C~~C~~~~~~~~~~~~H~~g   25 (35)
T smart00451        3 GFYCKLCNVTFTDEISVEAHLKG   25 (35)
T ss_pred             CeEccccCCccCCHHHHHHHHCh
Confidence            57899999999999999999753

Family of C2H2-type zinc fingers, present in matrin, U1 small nuclear ribonucleoprotein C and other RNA-binding proteins.

>COG5048 FOG: Zn-finger [General function prediction only]

Probab=85.58  E-value=0.36  Score=47.78  Aligned_cols=60  Identities=17%  Similarity=0.191  Sum_probs=49.9

Q ss_pred             cccccccccCccCCchhhHhhhh--hhccC--cccccCCCCCCCCccceeecCCCCCCHhHHHHHhhhccCCCC
Q 015460           34 KHFKCHVCHKKLSTAGGMAIHVL--QVHKE--NVTKVPNAKPGRESTDIEIYGMQGIPPDVLAAHYGEEEEVPS  103 (406)
Q Consensus        34 KPfkC~~CgksFss~s~LkrH~r--thHge--k~~~Cp~~~~~r~s~~c~iCG~~fi~~~~L~~H~k~he~~~s  103 (406)
                      +.+.|..|.+.|.+...|.+|.+  .|.++  +++.|+..          .|++.|.+...+..|...|.....
T Consensus       288 ~~~~~~~~~~~~s~~~~l~~~~~~~~h~~~~~~~~~~p~~----------~~~~~~~~~~~~~~~~~~~~~~~~  351 (467)
T COG5048         288 LPIKSKQCNISFSRSSPLTRHLRSVNHSGESLKPFSCPYS----------LCGKLFSRNDALKRHILLHTSISP  351 (467)
T ss_pred             cCCCCccccCCccccccccccccccccccccCCceeeecc----------CCCccccccccccCCcccccCCCc
Confidence            47999999999999999999999  67777  66666531          788999999999999998887443

>PF13913 zf-C2HC_2: zinc-finger of a C2HC-type

Probab=85.53  E-value=0.49  Score=30.08  Aligned_cols=20  Identities=20%  Similarity=0.561  Sum_probs=15.5

Q ss_pred             cccccccCccCCchhhHhhhh
Q 015460           36 FKCHVCHKKLSTAGGMAIHVL   56 (406)
Q Consensus        36 fkC~~CgksFss~s~LkrH~r   56 (406)
                      ..|..||+.| ..+.|.+|++
T Consensus         3 ~~C~~CgR~F-~~~~l~~H~~   22 (25)
T PF13913_consen    3 VPCPICGRKF-NPDRLEKHEK   22 (25)
T ss_pred             CcCCCCCCEE-CHHHHHHHHH
Confidence            4688899999 5577888864

>KOG1146 consensus Homeobox protein [General function prediction only]

Probab=84.84  E-value=0.37  Score=56.34  Aligned_cols=82  Identities=11%  Similarity=0.119  Sum_probs=61.4

Q ss_pred             cCccCcccCChHHHHHHhh-ccccccccccCccCCchhhHhhhhhhccC-cc--cccC--CCCCCCCccceeecCCCCCC
Q 015460           14 CYYCDREFDDEKILVQHQK-AKHFKCHVCHKKLSTAGGMAIHVLQVHKE-NV--TKVP--NAKPGRESTDIEIYGMQGIP   87 (406)
Q Consensus        14 C~~CgK~Fs~ks~Lk~H~R-EKPfkC~~CgksFss~s~LkrH~rthHge-k~--~~Cp--~~~~~r~s~~c~iCG~~fi~   87 (406)
                      |..|++.|.-...+. |.- +++|+|.+|...|..+..|..|.+....- +.  ..-+  .....+.-+ |.+|...+..
T Consensus      1263 c~~~~~~~~~~~~~~-~l~~~~~~~~~~~~~~~~~~~~l~~~~~k~~~~~~~~~~~~~~~l~~~d~~~~-c~~c~~~~~~ 1340 (1406)
T KOG1146|consen 1263 CGAVDELLTPSFGIS-TLDVTHRYLCRQCKMAFDGEAPLTAHQRKFCFAGRGSGGSMPPPLRVPDCTYH-CLACEVLLSG 1340 (1406)
T ss_pred             hhhccccccCcccee-ecccchhHHHHHHHhhhcchhHHHHHHHHHHhccCccccCCCCcccCcccccc-chHHHhhcch
Confidence            999999999888888 877 99999999999999999999997322110 00  0000  012233344 9999999999


Q ss_pred             HhHHHHHhhh
Q 015460           88 PDVLAAHYGE   97 (406)
Q Consensus        88 ~~~L~~H~k~   97 (406)
                      +..|+.|++.
T Consensus      1341 ~~alqihm~~ 1350 (1406)
T KOG1146|consen 1341 REALQIHMRS 1350 (1406)
T ss_pred             hHHHHHHHHH
Confidence            9999999986

>TIGR02300 FYDLN_acid conserved hypothetical protein TIGR02300

Probab=83.13  E-value=0.73  Score=40.78  Aligned_cols=38  Identities=11%  Similarity=0.159  Sum_probs=29.1

Q ss_pred             CCCccccCccCcccCChHHHHHHhhccccccccccCccCCchhhH
Q 015460            8 VSSKVWCYYCDREFDDEKILVQHQKAKHFKCHVCHKKLSTAGGMA   52 (406)
Q Consensus         8 ~gEKp~C~~CgK~Fs~ks~Lk~H~REKPfkC~~CgksFss~s~Lk   52 (406)
                      .|.|..|..||++|....       ..|..|.+||..|.....++
T Consensus         6 lGtKr~Cp~cg~kFYDLn-------k~p~vcP~cg~~~~~~~~~~   43 (129)
T TIGR02300         6 LGTKRICPNTGSKFYDLN-------RRPAVSPYTGEQFPPEEALK   43 (129)
T ss_pred             hCccccCCCcCccccccC-------CCCccCCCcCCccCcchhhc
Confidence            355666999999997643       56899999999987764444

Members of this family are bacterial proteins with a conserved motif [KR]FYDLN, sometimes flanked by a pair of CXXC motifs, followed by a long region of low complexity sequence in which roughly half the residues are Asp and Glu, including multiple runs of five or more acidic residues. The function of members of this family is unknown.

>PHA03247 large tegument protein UL36; Provisional

Probab=82.17  E-value=1.7e+02  Score=37.98  Aligned_cols=10  Identities=10%  Similarity=-0.164  Sum_probs=4.0

Q ss_pred             ccCccCCchh
Q 015460           41 CHKKLSTAGG   50 (406)
Q Consensus        41 CgksFss~s~   50 (406)
                      |+.-|-..-.
T Consensus      2470 ~~~~y~~~p~ 2479 (3151)
T PHA03247       2470 LGELFPGAPV 2479 (3151)
T ss_pred             ccccCCCCcc
Confidence            4444434333

>COG5236 Uncharacterized conserved protein, contains RING Zn-finger [General function prediction only]

Probab=80.34  E-value=1.1  Score=45.73  Aligned_cols=87  Identities=17%  Similarity=0.132  Sum_probs=48.1

Q ss_pred             cCc--cCcccCChHHHHHHhh--ccccccccccC---ccC------CchhhHhhhhhhccCcccccCCCCCCCCccceee
Q 015460           14 CYY--CDREFDDEKILVQHQK--AKHFKCHVCHK---KLS------TAGGMAIHVLQVHKENVTKVPNAKPGRESTDIEI   80 (406)
Q Consensus        14 C~~--CgK~Fs~ks~Lk~H~R--EKPfkC~~Cgk---sFs------s~s~LkrH~rthHgek~~~Cp~~~~~r~s~~c~i   80 (406)
                      |..  |.++......|+.|.+  -..+.|.+|-+   .|.      ++..|+.|.     ++..   ....++..-.|..
T Consensus       154 CP~skc~~~C~~~k~lk~H~K~~H~~~~C~~C~~nKk~F~~E~~lF~~~~Lr~H~-----~~G~---~e~GFKGHP~C~F  225 (493)
T COG5236         154 CPKSKCHRRCGSLKELKKHYKAQHGFVLCSECIGNKKDFWNEIRLFRSSTLRDHK-----NGGL---EEEGFKGHPLCIF  225 (493)
T ss_pred             CCchhhhhhhhhHHHHHHHHHhhcCcEEhHhhhcCcccCccceeeeecccccccc-----cCCc---cccCcCCCchhhh
Confidence            643  5555556667777776  23455776643   233      233444443     1100   0112333446778


Q ss_pred             cCCCCCCHhHHHHHhhhccCCCCccccC
Q 015460           81 YGMQGIPPDVLAAHYGEEEEVPSKMAKV  108 (406)
Q Consensus        81 CG~~fi~~~~L~~H~k~he~~~sk~~k~  108 (406)
                      |...|-..+.|..|++...+...-|..+
T Consensus       226 C~~~FYdDDEL~~HcR~~HE~ChICD~v  253 (493)
T COG5236         226 CKIYFYDDDELRRHCRLRHEACHICDMV  253 (493)
T ss_pred             ccceecChHHHHHHHHhhhhhhhhhhcc
Confidence            8888888888888887766555555544

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	406
1wjp_A	107	Zinc finger protein 295; ZF-C2H2 domain, zinc bind	1e-05
1twf_A	1733	B220, DNA-directed RNA polymerase II largest subun	2e-05
1zr9_A	124	Zinc finger protein 593; DNA binding, structural g	2e-05
1m2v_B	926	SEC24, protein transport protein SEC24, SEC24P, SE	1e-04
1m2v_B	926	SEC24, protein transport protein SEC24, SEC24P, SE	2e-04
1m2v_B	926	SEC24, protein transport protein SEC24, SEC24P, SE	6e-04
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	2e-04
2ghf_A	102	ZHX1, zinc fingers and homeoboxes protein 1; C2H2	2e-04
3h0g_A	1752	DNA-directed RNA polymerase II subunit RPB1; trans	3e-04

>1wjp_A Zinc finger protein 295; ZF-C2H2 domain, zinc binding, nucleic acid binding, KIAA1227 protein, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 Length = 107

 Score = 43.0 bits (100), Expect = 1e-05
 Identities = 12/52 (23%), Positives = 24/52 (46%), Gaps = 3/52 (5%)

Query: 14 CYYCDREFDDEKILVQHQ---KAKHFKCHVCHKKLSTAGGMAIHVLQVHKEN 62
          C YC   F   ++  +H+   + K   C  C +   ++  +  H ++VH +N
Sbjct: 45 CPYCSLRFFSPELKQEHESKCEYKKLTCLECMRTFKSSFSIWRHQVEVHNQN 96

>1twf_A B220, DNA-directed RNA polymerase II largest subunit; transcription, mRNA, multiprotein complex; HET: UTP; 2.30A {Saccharomyces cerevisiae} SCOP: e.29.1.2 PDB: 1i3q_A 1i6h_A 1k83_A* 1nik_A 1nt9_A 1pqv_A 1r5u_A 1r9s_A* 1r9t_A* 1sfo_A* 1twa_A* 1twc_A* 1i50_A* 1twg_A* 1twh_A* 1wcm_A 1y1v_A 1y1w_A 1y1y_A 1y77_A* ... Length = 1733

 Score = 46.2 bits (109), Expect = 2e-05
 Identities = 39/211 (18%), Positives = 61/211 (28%), Gaps = 17/211 (8%)

Query: 117  GGVVPGQLGVSYPPQSTL----GMMQPIYSSAVPVPPAGWPVPPRPQPWYPQHAAVSIPP 172
            GGV P                  M  P+  S      AG         +    +      
Sbjct: 1468 GGVTPYSNESGLVNADLDVKDELMFSPLVDSGSNDAMAGGFTAYGGADYGEATSPFGAYG 1527

Query: 173  PAAVGYAQQPLFPVQNVRPPLASSTSPALQPSPVVP----PGMPSSTPPVTVSQPLFPVV 228
             A          P  +   P  S TSPA  P+        P    ++P  + + P +   
Sbjct: 1528 EAPTSPGFGVSSPGFSPTSPTYSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1587

Query: 229  NNNTTSQSSLFSAPIPSTSIALSSSAEIKGSVDAHSSANTSVTNSYHVPSMQGGTLSNSH 288
            + + +  S  +S   PS S    S           S + +  + SY   S      S S+
Sbjct: 1588 SPSYSPTSPSYSPTSPSYSPTSPSY-------SPTSPSYSPTSPSYSPTSPSYSPTSPSY 1640

Query: 289  SYASGPNTGGPSIGPP--PVIANKAPATQPA 317
            S  S   +       P  P  +  +P+  P 
Sbjct: 1641 SPTSPSYSPTSPSYSPTSPAYSPTSPSYSPT 1671

>1zr9_A Zinc finger protein 593; DNA binding, structural genomics, PSI, protein structure initiative, center for eukaryotic structural genomics, CESG; NMR {Homo sapiens} SCOP: g.37.1.4 Length = 124

 Score = 42.8 bits (100), Expect = 2e-05
 Identities = 19/74 (25%), Positives = 28/74 (37%), Gaps = 12/74 (16%)

Query: 13  WCYYCDREFDDEKILVQHQKAKHFKCHVCHKKLST----------AGGMAIHVLQVHKEN 62
            C  C R F D   L  H ++K  K  +  K+LS           A GM  +V       
Sbjct: 52  RCLACARYFIDSTNLKTHFRSKDHKKRL--KQLSVEPYSQEEAERAAGMGSYVPPRRLAV 109

Query: 63  VTKVPNAKPGREST 76
            T+V    P  +++
Sbjct: 110 PTEVSTEVPEMDTS 123

>1m2v_B SEC24, protein transport protein SEC24, SEC24P, SEC24 protein, abnormal nuclear; zinc-finger, beta barrel, VWA domain, gelsolin domain,; 2.75A {Saccharomyces cerevisiae} SCOP: a.71.2.1 b.2.8.1 c.62.1.2 d.109.2.1 g.41.10.1 Length = 926

 Score = 43.3 bits (101), Expect = 1e-04
 Identities = 18/132 (13%), Positives = 29/132 (21%), Gaps = 5/132 (3%)

Query: 113 PQLVGGVVPGQLGVSYPPQSTLGMMQPIYSSAVPVPPAGWPVPPRPQPWYPQHAAVSIPP 172
            Q      P Q    + P          Y      P    P   + Q   P    +    
Sbjct: 14  LQYGQNATPLQQPAQFMPPQDPAAAGMSYGQMGMPPQGAVPSMGQQQFLTPAQEQLHQQI 73

Query: 173 PAAVGYAQQPLFPVQNVRPPLASSTSPALQPSPVVPPGMPSSTPPVTVSQPLFPVVNNNT 232
             A             +  P     +  +QP   V  G P       ++ P +   +   
Sbjct: 74  DQATTSMNDMHLHNVPLVDP-----NAYMQPQVPVQMGTPLQQQQQPMAAPAYGQPSAAM 128

Query: 233 TSQSSLFSAPIP 244
                  +   P
Sbjct: 129 GQNMRPMNQLYP 140

>1m2v_B SEC24, protein transport protein SEC24, SEC24P, SEC24 protein, abnormal nuclear; zinc-finger, beta barrel, VWA domain, gelsolin domain,; 2.75A {Saccharomyces cerevisiae} SCOP: a.71.2.1 b.2.8.1 c.62.1.2 d.109.2.1 g.41.10.1 Length = 926

 Score = 42.5 bits (99), Expect = 2e-04
 Identities = 19/126 (15%), Positives = 33/126 (26%), Gaps = 4/126 (3%)

Query: 128 YPPQSTLGMMQPIYSSAVPVPPAGWPVPPRPQPWYPQHAAVSIPPPAAVGYAQQPLFPVQ 187
           YP       +Q   ++     PA +  P  P      +  + +PP  AV    Q  F   
Sbjct: 9   YPQA----QLQYGQNATPLQQPAQFMPPQDPAAAGMSYGQMGMPPQGAVPSMGQQQFLTP 64

Query: 188 NVRPPLASSTSPALQPSPVVPPGMPSSTPPVTVSQPLFPVVNNNTTSQSSLFSAPIPSTS 247
                           + +    +P   P   +   +   +      Q    +AP     
Sbjct: 65  AQEQLHQQIDQATTSMNDMHLHNVPLVDPNAYMQPQVPVQMGTPLQQQQQPMAAPAYGQP 124

Query: 248 IALSSS 253
            A    
Sbjct: 125 SAAMGQ 130

>1m2v_B SEC24, protein transport protein SEC24, SEC24P, SEC24 protein, abnormal nuclear; zinc-finger, beta barrel, VWA domain, gelsolin domain,; 2.75A {Saccharomyces cerevisiae} SCOP: a.71.2.1 b.2.8.1 c.62.1.2 d.109.2.1 g.41.10.1 Length = 926

 Score = 41.3 bits (96), Expect = 6e-04
 Identities = 12/127 (9%), Positives = 23/127 (18%)

Query: 121 PGQLGVSYPPQSTLGMMQPIYSSAVPVPPAGWPVPPRPQPWYPQHAAVSIPPPAAVGYAQ 180
             QL             Q +           +     P                A     
Sbjct: 11  QAQLQYGQNATPLQQPAQFMPPQDPAAAGMSYGQMGMPPQGAVPSMGQQQFLTPAQEQLH 70

Query: 181 QPLFPVQNVRPPLASSTSPALQPSPVVPPGMPSSTPPVTVSQPLFPVVNNNTTSQSSLFS 240
           Q +         +     P + P+  + P +P         Q             +++  
Sbjct: 71  QQIDQATTSMNDMHLHNVPLVDPNAYMQPQVPVQMGTPLQQQQQPMAAPAYGQPSAAMGQ 130

Query: 241 APIPSTS 247
              P   
Sbjct: 131 NMRPMNQ 137

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 42.5 bits (99), Expect = 2e-04
 Identities = 19/143 (13%), Positives = 48/143 (33%), Gaps = 34/143 (23%)

Query: 4   KKKRVSSKVWCYYCDREFDDEKILVQHQKAKHFKCHVCHKKLSTAGGMAIHVLQVHKENV 63
           ++  + ++++    DR ++D ++  ++        +V   +           L+      
Sbjct: 103 RQPSMMTRMYIEQRDRLYNDNQVFAKY--------NVSRLQP-------YLKLR------ 141

Query: 64  TKVPNAKPGRESTDIEIYGMQGIPPDVLAAHYGEEEEVPSKMAKVDTSFPQLVGGVVPGQ 123
             +   +P +   ++ I G+ G     +A       +V     KV          +    
Sbjct: 142 QALLELRPAK---NVLIDGVLGSGKTWVAL------DV-CLSYKVQCKMD---FKIFWLN 188

Query: 124 LGVSYPPQSTLGMMQPIYSSAVP 146
           L     P++ L M+Q +     P
Sbjct: 189 LKNCNSPETVLEMLQKLLYQIDP 211

>2ghf_A ZHX1, zinc fingers and homeoboxes protein 1; C2H2 zinc fingers, 4-stranded parallel/anti-parallel beta- sheet, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 102

 Score = 39.4 bits (91), Expect = 2e-04
 Identities = 16/83 (19%), Positives = 31/83 (37%), Gaps = 9/83 (10%)

Query: 3  KKKKRVSSKVWCYYCDREFDDEKILVQHQKAKH--------FKCHVCHKKLSTAGGMAIH 54
          ++ K+V     C YC  +  D  +   H  ++H        + C  C+        ++ H
Sbjct: 10 QQNKKVEGGYECKYCTFQTPDLNMFTFHVDSEHPNVVLNSSYVCVECNFLTKRYDALSEH 69

Query: 55 VLQVHK-ENVTKVPNAKPGREST 76
           L+ H  E   K+   K   ++ 
Sbjct: 70 NLKYHPGEENFKLTMVKRNNQTI 92

>3h0g_A DNA-directed RNA polymerase II subunit RPB1; transcription, multi-protein complex, DNA- binding, magnesium; 3.65A {Schizosaccharomyces pombe} Length = 1752

 Score = 42.4 bits (99), Expect = 3e-04
 Identities = 39/190 (20%), Positives = 61/190 (32%), Gaps = 11/190 (5%)

Query: 127  SYPPQSTLGMMQPIYSSAVPVPPAGWPVPPRPQPWYPQHAAVSIPPPAAVGYAQQPLFPV 186
             +          P+          G+          P     S   P         + P 
Sbjct: 1495 GFVGSPDAAAFSPLVQGGSE-GREGFGDYGLLGAASPYKGVQS---PGYTSPFSSAMSPG 1550

Query: 187  QNVRPPLASSTSPALQPSPVVPPGMPSSTPPVTVSQPLFPVVNNNTTSQSSLFSAPIPS- 245
              +  P  S +SP    SP   P  PS +P      P  P  + + TS S   ++P  S 
Sbjct: 1551 YGLTSPSYSPSSPGYSTSPAYMPSSPSYSPTSPSYSPTSP--SYSPTSPSYSPTSPSYSA 1608

Query: 246  TSIALSSSAEIKGSVDAHSSANTSVTNSYHVPSMQGGTLSNSHSYASGPNTGGPSIGPPP 305
            TS + S ++    S    S + +  + SY   S      S S+S  S P+    S    P
Sbjct: 1609 TSPSYSPTS---PSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTS-PSYSPTSPSYSP 1664

Query: 306  VIANKAPATQ 315
               + +P + 
Sbjct: 1665 TSPSYSPTSP 1674

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	406
2ee8_A	106	Protein ODD-skipped-related 2; zinc binding, ZF-C2	99.6
2lt7_A	133	Transcriptional regulator kaiso; zinc finger, doub	99.6
2dmd_A	96	Zinc finger protein 64, isoforms 1 and 2; ZNF338,	99.57
2yt9_A	95	Zinc finger-containing protein 1; C2H2, structural	99.56
2csh_A	110	Zinc finger protein 297B; ZF-C2H2 domain, zinc fin	99.53
1wjp_A	107	Zinc finger protein 295; ZF-C2H2 domain, zinc bind	99.53
4gzn_C	60	ZFP-57, zinc finger protein 57; transcription-DNA	99.52
2kmk_A	82	Zinc finger protein GFI-1; tandem repeat zinc fing	99.52
1a1h_A	90	QGSR zinc finger peptide; complex (zinc finger/DNA	99.52
2dlq_A	124	GLI-kruppel family member HKR3; ZF-C2H2 domain, st	99.5
2jp9_A	119	Wilms tumor 1; DNA binding, nucleic acid recogniti	99.5
2i13_A	190	AART; DNA binding, zinc finger, DNA binding protei	99.49
2i13_A	190	AART; DNA binding, zinc finger, DNA binding protei	99.46
2ebt_A	100	Krueppel-like factor 5; C2H2-type zinc-finger, met	99.45
2cot_A	77	Zinc finger protein 435; ADK_LID domain, zinc fing	99.45
2dmi_A	115	Teashirt homolog 3; zinc finger protein 537, struc	99.45
1tf6_A	190	Protein (transcription factor IIIA); complex (tran	99.44
1ubd_C	124	Protein (YY1 zinc finger domain); transcription in	99.44
2rpc_A	155	Zinc finger protein ZIC 3; ZF-C2H2, zinc finger pr	99.43
2wbs_A	89	Krueppel-like factor 4; transcription-DNA complex,	99.41
4gzn_C	60	ZFP-57, zinc finger protein 57; transcription-DNA	99.41
1llm_C	88	Chimera of ZIF23-GCN4; dimerization, DNA recogniti	99.4
2lt7_A	133	Transcriptional regulator kaiso; zinc finger, doub	99.39
2lce_A	74	B-cell lymphoma 6 protein; structural genomics, no	99.37
2j7j_A	85	Transcription factor IIIA; zinc finger module, alt	99.35
2gli_A	155	Protein (five-finger GLI); protein/DNA complex, tr	99.34
2ghf_A	102	ZHX1, zinc fingers and homeoboxes protein 1; C2H2	99.34
1x5w_A	70	Zinc finger protein 64, isoforms 1; ZNF338, nuclea	99.32
1tf6_A	190	Protein (transcription factor IIIA); complex (tran	99.32
2dlk_A	79	Novel protein; ZF-C2H2 domain, zinc finger protein	99.32
1x6e_A	72	Zinc finger protein 24; ZNF24, KOX17, ZNF191, zsca	99.3
3uk3_C	57	Zinc finger protein 217; transcription factor, DNA	99.29
1x6h_A	86	Transcriptional repressor CTCF; zinc finger protei	99.29
2gqj_A	98	Zinc finger protein KIAA1196; ZF-C2H2 like domain,	99.28
2lv2_A	85	Insulinoma-associated protein 1; structural genomi	99.23
2gli_A	155	Protein (five-finger GLI); protein/DNA complex, tr	99.23
2drp_A	66	Protein (tramtrack DNA-binding domain); protein-DN	99.21
1bbo_A	57	Human enhancer-binding protein MBP-1; DNA-binding	99.21
2ct1_A	77	Transcriptional repressor CTCF; CCCTC-BINDING fact	99.21
2gqj_A	98	Zinc finger protein KIAA1196; ZF-C2H2 like domain,	99.19
2d9h_A	78	Zinc finger protein 692; ZF-C2H2 domain, structura	99.19
2wbt_A	129	B-129; zinc finger; 2.70A {Sulfolobus virus 1}	99.17
2ee8_A	106	Protein ODD-skipped-related 2; zinc binding, ZF-C2	99.17
2ctd_A	96	Zinc finger protein 512; zinc binding, two ZF-C2H2	99.16
2ctd_A	96	Zinc finger protein 512; zinc binding, two ZF-C2H2	99.15
2ej4_A	95	Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc bi	99.13
2adr_A	60	ADR1; transcription regulation, zinc finger,; NMR	99.11
2dlq_A	124	GLI-kruppel family member HKR3; ZF-C2H2 domain, st	99.1
2dmd_A	96	Zinc finger protein 64, isoforms 1 and 2; ZNF338,	99.1
1f2i_G	73	Fusion of N-terminal 17-MER peptide extension to Z	99.08
1a1h_A	90	QGSR zinc finger peptide; complex (zinc finger/DNA	99.08
2eod_A	66	TNF receptor-associated factor 4; zinc binding, NF	99.08
1x6e_A	72	Zinc finger protein 24; ZNF24, KOX17, ZNF191, zsca	99.06
2ctu_A	73	Zinc finger protein 483; zinc finger domain, struc	99.05
2wbt_A	129	B-129; zinc finger; 2.70A {Sulfolobus virus 1}	99.04
2kmk_A	82	Zinc finger protein GFI-1; tandem repeat zinc fing	99.03
2jp9_A	119	Wilms tumor 1; DNA binding, nucleic acid recogniti	99.03
2lv2_A	85	Insulinoma-associated protein 1; structural genomi	99.02
2lce_A	74	B-cell lymphoma 6 protein; structural genomics, no	99.02
3uk3_C	57	Zinc finger protein 217; transcription factor, DNA	99.01
2ct1_A	77	Transcriptional repressor CTCF; CCCTC-BINDING fact	99.01
1wjp_A	107	Zinc finger protein 295; ZF-C2H2 domain, zinc bind	99.01
1x5w_A	70	Zinc finger protein 64, isoforms 1; ZNF338, nuclea	99.0
1x6h_A	86	Transcriptional repressor CTCF; zinc finger protei	99.0
2rpc_A	155	Zinc finger protein ZIC 3; ZF-C2H2, zinc finger pr	98.99
2cot_A	77	Zinc finger protein 435; ADK_LID domain, zinc fing	98.97
2d9h_A	78	Zinc finger protein 692; ZF-C2H2 domain, structura	98.95
2epa_A	72	Krueppel-like factor 10; transforming growth facto	98.95
1ubd_C	124	Protein (YY1 zinc finger domain); transcription in	98.94
2yt9_A	95	Zinc finger-containing protein 1; C2H2, structural	98.93
1bbo_A	57	Human enhancer-binding protein MBP-1; DNA-binding	98.93
2drp_A	66	Protein (tramtrack DNA-binding domain); protein-DN	98.91
2adr_A	60	ADR1; transcription regulation, zinc finger,; NMR	98.89
2csh_A	110	Zinc finger protein 297B; ZF-C2H2 domain, zinc fin	98.89
1f2i_G	73	Fusion of N-terminal 17-MER peptide extension to Z	98.87
2ebt_A	100	Krueppel-like factor 5; C2H2-type zinc-finger, met	98.87
2wbs_A	89	Krueppel-like factor 4; transcription-DNA complex,	98.81
2eps_A	54	POZ-, at HOOK-, and zinc finger-containing protein	98.77
1llm_C	88	Chimera of ZIF23-GCN4; dimerization, DNA recogniti	98.75
2dmi_A	115	Teashirt homolog 3; zinc finger protein 537, struc	98.74
1yui_A	54	GAGA-factor; complex (DNA-binding protein/DNA), ch	98.72
2ghf_A	102	ZHX1, zinc fingers and homeoboxes protein 1; C2H2	98.71
2eod_A	66	TNF receptor-associated factor 4; zinc binding, NF	98.7
2emk_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.68
2em0_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	98.67
2ytn_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.67
2ep1_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.66
2enf_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.66
2eq4_A	46	Zinc finger protein 224; C2H2, zinc finger domain,	98.66
2epa_A	72	Krueppel-like factor 10; transforming growth facto	98.66
2eop_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	98.66
2yth_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.66
2emf_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.66
2eoh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.65
2ely_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	98.65
2epz_A	46	Zinc finger protein 28 homolog; C2H2, zinc finger	98.65
2ema_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.65
2eq2_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	98.65
2ep3_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.65
2el5_A	42	Zinc finger protein 268; alternative splicing, DNA	98.65
2el4_A	46	Zinc finger protein 268; alternative splicing, DNA	98.65
2elz_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	98.65
2eml_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.65
2eon_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.65
2eoo_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.65
2ytq_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	98.64
2em3_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.64
2yti_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.64
2emy_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	98.64
2ytp_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.64
2eoq_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.64
2ytr_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.64
2eov_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.64
2ytj_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.64
2yte_A	42	Zinc finger protein 473; ZF-C2H2, structural genom	98.64
2em6_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.64
2yto_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.64
2eoe_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.64
2em4_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.63
2emh_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.63
2em5_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.63
2eme_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	98.63
2eq1_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	98.63
2emg_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.63
2yts_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.63
2emx_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	98.63
2eq0_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	98.63
2ytg_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.63
2emm_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.63
2ep2_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.63
2ytf_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	98.63
2en8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.63
2enh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.62
2em7_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.62
2emi_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.62
2en7_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	98.62
2eoz_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	98.62
2emj_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.62
2yu8_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.62
2eow_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.62
2ytk_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.62
2emp_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.62
2ytm_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.62
2yrj_A	46	Zinc finger protein 473; C2H2-type zinc finger, st	98.62
2epw_A	46	Zinc finger protein 268; C2H2, zinc finger domain,	98.61
2ytd_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	98.61
2en1_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.61
2ene_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.61
2emz_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.61
2yu5_A	44	Zinc finger protein 473; ZF-C2H2 domain, structura	98.61
2em9_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.6
2eor_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.6
2ytb_A	42	Zinc finger protein 32; zinc-finger domain, C2H2,	98.6
2en9_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.6
2em2_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.59
2eof_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	98.59
2en3_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.59
2eoj_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	98.59
2el6_A	46	Zinc finger protein 268; alternative splicing, DNA	98.59
2enc_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.58
2eos_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	98.58
2ysp_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.58
2en6_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	98.58
2yso_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.57
2em8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.57
2epr_A	48	POZ-, at HOOK-, and zinc finger-containing protein	98.57
2eq3_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	98.57
2epc_A	42	Zinc finger protein 32; zinc finger domain, C2H2,	98.56
2emb_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	98.56
2epx_A	47	Zinc finger protein 28 homolog; C2H2, zinc finger	98.55
2eox_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	98.55
2en2_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	98.55
2eom_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.55
2j7j_A	85	Transcription factor IIIA; zinc finger module, alt	98.55
2eou_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	98.54
2eoy_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	98.54
2yrm_A	43	B-cell lymphoma 6 protein; ZF-C2H2, zinc binding,	98.53
2epv_A	44	Zinc finger protein 268; C2H2, zinc finger domain,	98.51
2ytt_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	98.51
2ej4_A	95	Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc bi	98.51
2epq_A	45	POZ-, at HOOK-, and zinc finger-containing protein	98.51
2elz_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	98.51
2epu_A	45	Zinc finger protein 32; C2H2, zinc finger domain,	98.5
2ep0_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.5
2ept_A	41	Zinc finger protein 32; C2H2, zinc finger domain,	98.5
2eps_A	54	POZ-, at HOOK-, and zinc finger-containing protein	98.48
2dlk_A	79	Novel protein; ZF-C2H2 domain, zinc finger protein	98.48
2ytq_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	98.48
2epr_A	48	POZ-, at HOOK-, and zinc finger-containing protein	98.46
2ytt_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	98.45
2ytm_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.45
2ytn_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.45
2epz_A	46	Zinc finger protein 28 homolog; C2H2, zinc finger	98.45
2em7_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.45
2em0_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	98.44
2eq4_A	46	Zinc finger protein 224; C2H2, zinc finger domain,	98.44
2epq_A	45	POZ-, at HOOK-, and zinc finger-containing protein	98.44
2emk_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.43
2ely_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	98.43
2el4_A	46	Zinc finger protein 268; alternative splicing, DNA	98.43
2ene_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.43
2enc_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.43
2eop_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	98.43
2ep0_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.43
2eq0_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	98.43
2emf_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.43
2emm_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.43
2emx_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	98.42
2ytr_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.42
2eml_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.42
2eoe_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.42
2ema_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.42
2emh_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.42
2emp_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.41
2eov_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.41
2el6_A	46	Zinc finger protein 268; alternative splicing, DNA	98.41
2yso_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.41
2em9_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.41
2em8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.41
2yu8_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.41
1rim_A	33	E6APC2 peptide; E6-binding domain, zinc finger, hu	98.41
2emy_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	98.41
2ytd_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	98.4
2eoo_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.4
2eoq_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.4
2ysp_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.4
2ep2_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.4
2en6_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	98.4
2ytj_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.4
2em5_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.39
1vd4_A	62	Transcription initiation factor IIE, alpha subunit	98.39
2eme_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	98.39
2ytk_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.39
2en8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.39
2epw_A	46	Zinc finger protein 268; C2H2, zinc finger domain,	98.39
1njq_A	39	Superman protein; zinc-finger, peptide-zinc comple	98.38
2ep3_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.37
2ytg_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.36
2en1_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.36
2d9k_A	75	FLN29 gene product; zinc finger, ZF-TRAF, structur	98.35
2em2_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.34
2epx_A	47	Zinc finger protein 28 homolog; C2H2, zinc finger	98.33
1x6f_A	88	Zinc finger protein 462; zinc finger domain, KIAA1	98.32
1x6f_A	88	Zinc finger protein 462; zinc finger domain, KIAA1	98.3
1x3c_A	73	Zinc finger protein 292; DNA binding, nuclear prot	98.27
2ent_A	48	Krueppel-like factor 15; zinc binding, transcripti	98.27
2kfq_A	32	FP1; protein, de novo protein; NMR {Synthetic}	98.27
2ctu_A	73	Zinc finger protein 483; zinc finger domain, struc	98.26
2elx_A	35	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.25
2m0d_A	30	Zinc finger and BTB domain-containing protein 17;	98.22
1srk_A	35	Zinc finger protein ZFPM1; classical zinc finger,	98.22
2elo_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.21
2yrm_A	43	B-cell lymphoma 6 protein; ZF-C2H2, zinc binding,	98.21
1p7a_A	37	BF3, BKLF, kruppel-like factor 3; classical zinc f	98.2
2eom_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.2
2ent_A	48	Krueppel-like factor 15; zinc binding, transcripti	98.2
2emg_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.19
2enf_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.19
1rik_A	29	E6APC1 peptide; E6-binding domain, zinc finger, hu	98.18
2yti_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.18
2eon_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.18
2emj_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.17
1ard_A	29	Yeast transcription factor ADR1; transcription reg	98.17
2eln_A	38	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.17
2elr_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.17
2ytp_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.17
2em4_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.17
2ept_A	41	Zinc finger protein 32; C2H2, zinc finger domain,	98.17
2ytf_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	98.17
2eq2_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	98.16
2epu_A	45	Zinc finger protein 32; C2H2, zinc finger domain,	98.16
2em6_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.16
2eor_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.16
2yth_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.15
1zfd_A	32	SWI5; DNA binding motif, zinc finger DNA binding d	98.15
2enh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.15
2lvr_A	30	Zinc finger and BTB domain-containing protein 17;	97.45
1klr_A	30	Zinc finger Y-chromosomal protein; transcription;	98.15
2emi_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.15
2ep1_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.15
2en9_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.15
2eos_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	98.15
2eow_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.15
2elv_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.15
2yts_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.14
2m0e_A	29	Zinc finger and BTB domain-containing protein 17;	98.14
2elt_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.14
2eq1_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	98.14
2yte_A	42	Zinc finger protein 473; ZF-C2H2, structural genom	98.13
2em3_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.13
2yrj_A	46	Zinc finger protein 473; C2H2-type zinc finger, st	98.13
2epc_A	42	Zinc finger protein 32; zinc finger domain, C2H2,	98.13
2kvf_A	28	Zinc finger and BTB domain-containing protein 32;	98.12
2eou_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	98.12
2els_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.12
2elq_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.12
2en2_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	98.11
2eoh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.11
2el5_A	42	Zinc finger protein 268; alternative splicing, DNA	98.1
2eoj_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	98.1
2en7_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	98.1
2emz_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.1
1vd4_A	62	Transcription initiation factor IIE, alpha subunit	98.09
2elp_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.09
2m0f_A	29	Zinc finger and BTB domain-containing protein 17;	98.08
2lvt_A	29	Zinc finger and BTB domain-containing protein 17;	97.36
2kvh_A	27	Zinc finger and BTB domain-containing protein 32;	98.08
2kvg_A	27	Zinc finger and BTB domain-containing protein 32;	98.08
2eoz_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	98.08
2yto_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.07
2eof_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	98.06
2eq3_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	98.06
2emb_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	98.05
2ytb_A	42	Zinc finger protein 32; zinc-finger domain, C2H2,	98.05
1sp2_A	31	SP1F2; zinc finger, transcription activation; NMR	98.04
3iuf_A	48	Zinc finger protein UBI-D4; structural genomics co	98.03
1bhi_A	38	CRE-BP1, ATF-2; CRE binding protein, transcription	98.03
2yu5_A	44	Zinc finger protein 473; ZF-C2H2 domain, structura	98.02
2en3_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.02
1znf_A	27	31ST zinc finger from XFIN; zinc finger DNA bindin	98.01
1paa_A	30	Yeast transcription factor ADR1; transcription reg	98.0
2epp_A	66	POZ-, at HOOK-, and zinc finger-containing protein	97.99
2eox_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	97.96
2eoy_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	97.94
2epv_A	44	Zinc finger protein 268; C2H2, zinc finger domain,	97.94
1fv5_A	36	First zinc finger of U-shaped; CCHC, protein inter	97.93
2d9k_A	75	FLN29 gene product; zinc finger, ZF-TRAF, structur	97.92
1fv5_A	36	First zinc finger of U-shaped; CCHC, protein inter	97.92
2elm_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	97.9
1va1_A	37	Transcription factor SP1; C2H2 type zinc finger, D	97.9
2lvu_A	26	Zinc finger and BTB domain-containing protein 17;	97.12
1yui_A	54	GAGA-factor; complex (DNA-binding protein/DNA), ch	97.84
1njq_A	39	Superman protein; zinc-finger, peptide-zinc comple	97.81
1ncs_A	47	Peptide M30F, transcriptional factor SWI5; DNA bin	97.78
2ab3_A	29	ZNF29; zinc finger protein, beta BETA alpha, RREII	97.64
1x3c_A	73	Zinc finger protein 292; DNA binding, nuclear prot	97.63
1rim_A	33	E6APC2 peptide; E6-binding domain, zinc finger, hu	97.54
2elo_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	97.46
2elx_A	35	Zinc finger protein 406; ZFAT zinc finger 1, struc	97.44
2epp_A	66	POZ-, at HOOK-, and zinc finger-containing protein	97.42
1srk_A	35	Zinc finger protein ZFPM1; classical zinc finger,	97.38
1p7a_A	37	BF3, BKLF, kruppel-like factor 3; classical zinc f	97.33
2kvh_A	27	Zinc finger and BTB domain-containing protein 32;	97.23
2kvg_A	27	Zinc finger and BTB domain-containing protein 32;	97.21
1bhi_A	38	CRE-BP1, ATF-2; CRE binding protein, transcription	97.2
2elm_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	97.19
2elr_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	97.13
3iuf_A	48	Zinc finger protein UBI-D4; structural genomics co	97.13
2elt_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	97.13
2eln_A	38	Zinc finger protein 406; ZFAT zinc finger 1, struc	97.12
2elv_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	97.11
2kvf_A	28	Zinc finger and BTB domain-containing protein 32;	97.1
2elq_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	97.1
2elp_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	97.02
2els_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	97.0
2kfq_A	32	FP1; protein, de novo protein; NMR {Synthetic}	96.99
2m0d_A	30	Zinc finger and BTB domain-containing protein 17;	96.92
2lvu_A	26	Zinc finger and BTB domain-containing protein 17;	95.85
1ard_A	29	Yeast transcription factor ADR1; transcription reg	96.75
1klr_A	30	Zinc finger Y-chromosomal protein; transcription;	96.73
1va1_A	37	Transcription factor SP1; C2H2 type zinc finger, D	96.73
1rik_A	29	E6APC1 peptide; E6-binding domain, zinc finger, hu	96.7
2m0e_A	29	Zinc finger and BTB domain-containing protein 17;	96.63
1znf_A	27	31ST zinc finger from XFIN; zinc finger DNA bindin	96.6
2m0f_A	29	Zinc finger and BTB domain-containing protein 17;	96.59
2lvr_A	30	Zinc finger and BTB domain-containing protein 17;	95.61
1zfd_A	32	SWI5; DNA binding motif, zinc finger DNA binding d	96.51
1zw8_A	64	Zinc-responsive transcriptional regulator ZAP1; in	96.48
2lvt_A	29	Zinc finger and BTB domain-containing protein 17;	95.42
1paa_A	30	Yeast transcription factor ADR1; transcription reg	96.38
1sp2_A	31	SP1F2; zinc finger, transcription activation; NMR	96.22
2ab3_A	29	ZNF29; zinc finger protein, beta BETA alpha, RREII	96.03
1ncs_A	47	Peptide M30F, transcriptional factor SWI5; DNA bin	95.86
1zu1_A	127	DSRBP-ZFA, RNA binding protein ZFA; zinc finger pr	95.04
1zr9_A	124	Zinc finger protein 593; DNA binding, structural g	94.74
1zr9_A	124	Zinc finger protein 593; DNA binding, structural g	94.23
1zu1_A	127	DSRBP-ZFA, RNA binding protein ZFA; zinc finger pr	93.82
1zw8_A	64	Zinc-responsive transcriptional regulator ZAP1; in	92.4
2e72_A	49	POGO transposable element with ZNF domain; zinc fi	91.04
2e72_A	49	POGO transposable element with ZNF domain; zinc fi	87.85
2elu_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	85.36
2jsp_A	87	Transcriptional regulatory protein ROS; prokaryoti	84.88
3hcs_A	170	TNF receptor-associated factor 6; cross-brace, bet	82.25
3hcs_A	170	TNF receptor-associated factor 6; cross-brace, bet	80.06

>2ee8_A Protein ODD-skipped-related 2; zinc binding, ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: k.12.1.1

Probab=99.60  E-value=1.9e-15  Score=122.89  Aligned_cols=81  Identities=22%  Similarity=0.411  Sum_probs=73.7

Q ss_pred             CCCccc-cCccCcccCChHHHHHHhh----ccccccccccCccCCchhhHhhhhhhccCcccccCCCCCCCCccceeecC
Q 015460            8 VSSKVW-CYYCDREFDDEKILVQHQK----AKHFKCHVCHKKLSTAGGMAIHVLQVHKENVTKVPNAKPGRESTDIEIYG   82 (406)
Q Consensus         8 ~gEKp~-C~~CgK~Fs~ks~Lk~H~R----EKPfkC~~CgksFss~s~LkrH~rthHgek~~~Cp~~~~~r~s~~c~iCG   82 (406)
                      ..++.+ |.+|++.|.....|.+|++    +++|+|.+|++.|.+...|++|++.|++++.            +.|.+|+
T Consensus        13 ~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~------------~~C~~C~   80 (106)
T 2ee8_A           13 KTKKEFICKFCGRHFTKSYNLLIHERTHTDERPYTCDICHKAFRRQDHLRDHRYIHSKEKP------------FKCQECG   80 (106)
T ss_dssp             CCCCCCBCSSSCCBCSSHHHHHHHHHHHCCSCCCBCSSSCCBCSCHHHHHHHGGGSCCCCT------------TSCSSSC
T ss_pred             CCCcCeECCCCCCccCCHHHHHHHHHHcCCCCCcCCCCccchhCCHHHHHHHHHHhCCCCC------------eECCCcC
Confidence            356677 9999999999999999998    7999999999999999999999999987764            5667899


Q ss_pred             CCCCCHhHHHHHhhhccC
Q 015460           83 MQGIPPDVLAAHYGEEEE  100 (406)
Q Consensus        83 ~~fi~~~~L~~H~k~he~  100 (406)
                      +.|.....|.+|++.|..
T Consensus        81 ~~f~~~~~L~~H~~~H~~   98 (106)
T 2ee8_A           81 KGFCQSRTLAVHKTLHMQ   98 (106)
T ss_dssp             CCCSSHHHHHHHHHHTTS
T ss_pred             CcccCHHHHHHHHHHhCC
Confidence            999999999999999976

>2lt7_A Transcriptional regulator kaiso; zinc finger, double helix, metal binding protein-DNA complex; HET: DNA; NMR {Homo sapiens} PDB: 4f6m_A* 4f6n_A*

Probab=99.60  E-value=2.7e-16  Score=136.51  Aligned_cols=81  Identities=19%  Similarity=0.270  Sum_probs=74.5

Q ss_pred             CCCccc-cCccCcccCChHHHHHHhh----ccccccccccCccCCchhhHhhhhhhccCcccccCCCCCCCCccceeecC
Q 015460            8 VSSKVW-CYYCDREFDDEKILVQHQK----AKHFKCHVCHKKLSTAGGMAIHVLQVHKENVTKVPNAKPGRESTDIEIYG   82 (406)
Q Consensus         8 ~gEKp~-C~~CgK~Fs~ks~Lk~H~R----EKPfkC~~CgksFss~s~LkrH~rthHgek~~~Cp~~~~~r~s~~c~iCG   82 (406)
                      .||+.| |.+||+.|.....|++|++    +|+|+|++|++.|.+...|.+|+++|.++++            +.|++||
T Consensus        18 ~Gek~y~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~------------~~C~~C~   85 (133)
T 2lt7_A           18 DGRVYYICIVCKRSYVCLTSLRRHFNIHSWEKKYPCRYCEKVFPLAEYRTKHEIHHTGERR------------YQCLACG   85 (133)
T ss_dssp             TTEEEEEETTTCCEESCHHHHHHHHHHHHCCSCEECSSSSCEESSHHHHHHHHHHHHTCCC------------EEESSSC
T ss_pred             CCCcCeECCCCCCCcCCHHHHHHHHHHcCCCCCeeCCccCeecccccchhhhccccCCCcc------------ccCCCCC
Confidence            488889 9999999999999999998    8999999999999999999999999988764            5567899


Q ss_pred             CCCCCHhHHHHHhhhccC
Q 015460           83 MQGIPPDVLAAHYGEEEE  100 (406)
Q Consensus        83 ~~fi~~~~L~~H~k~he~  100 (406)
                      +.|.....|..|++.|..
T Consensus        86 k~F~~~~~L~~H~~~hh~  103 (133)
T 2lt7_A           86 KSFINYQFMSSHIKSVHS  103 (133)
T ss_dssp             CEESSHHHHHHHHHHHTC
T ss_pred             CCcCCHHHHHHHhHHhcC
Confidence            999999999999998754

>2dmd_A Zinc finger protein 64, isoforms 1 and 2; ZNF338, nuclear protein, DNA- binding, transcription, C2H2-type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.57  E-value=2.6e-15  Score=119.76  Aligned_cols=81  Identities=20%  Similarity=0.322  Sum_probs=73.6

Q ss_pred             CCCccc-cCccCcccCChHHHHHHhh----ccccccccccCccCCchhhHhhhhhhccCcccccCCCCCCCCccceeecC
Q 015460            8 VSSKVW-CYYCDREFDDEKILVQHQK----AKHFKCHVCHKKLSTAGGMAIHVLQVHKENVTKVPNAKPGRESTDIEIYG   82 (406)
Q Consensus         8 ~gEKp~-C~~CgK~Fs~ks~Lk~H~R----EKPfkC~~CgksFss~s~LkrH~rthHgek~~~Cp~~~~~r~s~~c~iCG   82 (406)
                      .++++| |.+|++.|.....|.+|++    +++|+|.+|++.|.+...|++|++.|++++.            +.|.+|+
T Consensus         4 ~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~------------~~C~~C~   71 (96)
T 2dmd_A            4 GSSGPHKCEVCGKCFSRKDKLKTHMRCHTGVKPYKCKTCDYAAADSSSLNKHLRIHSDERP------------FKCQICP   71 (96)
T ss_dssp             CCCCCCCBTTTTBCCCCHHHHHHHGGGCCCCCSEECSSSCCEESSHHHHHHHHHHSCCCCC------------EECSSSS
T ss_pred             CCCcCeECCCCCCccCCHHHHHHHHHhcCCCCCEeCCCCCCccCCHHHHHHHHHHhCCCCC------------ccCCCCC
Confidence            466778 9999999999999999998    7999999999999999999999999988764            5567799


Q ss_pred             CCCCCHhHHHHHhhhccC
Q 015460           83 MQGIPPDVLAAHYGEEEE  100 (406)
Q Consensus        83 ~~fi~~~~L~~H~k~he~  100 (406)
                      +.|.....|..|++.|.+
T Consensus        72 ~~f~~~~~l~~H~~~h~~   89 (96)
T 2dmd_A           72 YASRNSSQLTVHLRSHTG   89 (96)
T ss_dssp             CEESSHHHHHHHHTTCCS
T ss_pred             CccCCHHHHHHHHHHhcC
Confidence            999999999999999875

>2yt9_A Zinc finger-containing protein 1; C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.56  E-value=4.5e-15  Score=118.15  Aligned_cols=84  Identities=23%  Similarity=0.293  Sum_probs=74.1

Q ss_pred             CCCccc-cCccCcccCChHHHHHHhh----ccccccccccCccCCchhhHhhhhhhccCcccccCCCCCCCCccceeecC
Q 015460            8 VSSKVW-CYYCDREFDDEKILVQHQK----AKHFKCHVCHKKLSTAGGMAIHVLQVHKENVTKVPNAKPGRESTDIEIYG   82 (406)
Q Consensus         8 ~gEKp~-C~~CgK~Fs~ks~Lk~H~R----EKPfkC~~CgksFss~s~LkrH~rthHgek~~~Cp~~~~~r~s~~c~iCG   82 (406)
                      .+++.+ |.+|++.|.....|.+|++    +++|+|.+|++.|.+...|++|++.|+++.          ...+.|.+|+
T Consensus         3 ~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~----------~~~~~C~~C~   72 (95)
T 2yt9_A            3 SGSSGVACEICGKIFRDVYHLNRHKLSHSGEKPYSCPVCGLRFKRKDRMSYHVRSHDGSV----------GKPYICQSCG   72 (95)
T ss_dssp             CCCSCEECSSSCCEESSSHHHHHHHHHSCSSCSEECSSSCCEESCHHHHHHHHHHHCCCC----------CSSBCCSSSC
T ss_pred             CCCCCeECCCCCCccCChHHHHHHHHhcCCCCCCcCCCCCCccCCHHHHHHHHHHhcCCC----------CCceECCCcc
Confidence            367778 9999999999999999998    899999999999999999999999998762          1357778899


Q ss_pred             CCCCCHhHHHHHhh-hccCC
Q 015460           83 MQGIPPDVLAAHYG-EEEEV  101 (406)
Q Consensus        83 ~~fi~~~~L~~H~k-~he~~  101 (406)
                      +.|.....|..|++ .|.+.
T Consensus        73 ~~f~~~~~L~~H~~~~H~~~   92 (95)
T 2yt9_A           73 KGFSRPDHLNGHIKQVHSGP   92 (95)
T ss_dssp             CCBSSHHHHHHHHHHTSCCC
T ss_pred             chhCCHHHHHHHHHHhcCCC
Confidence            99999999999986 67654

>2csh_A Zinc finger protein 297B; ZF-C2H2 domain, zinc finger and BTB domain containing protein 22B, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.53  E-value=4.1e-15  Score=121.93  Aligned_cols=81  Identities=17%  Similarity=0.296  Sum_probs=73.4

Q ss_pred             CCCCccc-cCccCcccCChHHHHHHhh----ccccccccccCccCCchhhHhhhhhhccCcccccCCCCCCCCccceeec
Q 015460            7 RVSSKVW-CYYCDREFDDEKILVQHQK----AKHFKCHVCHKKLSTAGGMAIHVLQVHKENVTKVPNAKPGRESTDIEIY   81 (406)
Q Consensus         7 r~gEKp~-C~~CgK~Fs~ks~Lk~H~R----EKPfkC~~CgksFss~s~LkrH~rthHgek~~~Cp~~~~~r~s~~c~iC   81 (406)
                      +.+++.| | +|++.|.....|++|++    +++|+|.+|++.|.+...|++|++.|++++.            |.|.+|
T Consensus         5 h~~~k~~~C-~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~------------~~C~~C   71 (110)
T 2csh_A            5 SSGDKLYPC-QCGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHMKIHTGIKP------------YECNIC   71 (110)
T ss_dssp             CCCCCCEEC-TTSCEESSHHHHHHHHHHHSCCCSEECTTTSCEESSSHHHHHHHTTTCCCCC------------EECSSS
T ss_pred             CCCCCCEec-cCCCccCCHHHHHHHHHHcCCCcCccCCCCCcccCCHHHHHHHHHHcCCCCC------------eeCCCC
Confidence            4577888 9 99999999999999998    7999999999999999999999999988764            556779


Q ss_pred             CCCCCCHhHHHHHhhhccC
Q 015460           82 GMQGIPPDVLAAHYGEEEE  100 (406)
Q Consensus        82 G~~fi~~~~L~~H~k~he~  100 (406)
                      ++.|.....|..|++.|..
T Consensus        72 ~~~f~~~~~l~~H~~~~~~   90 (110)
T 2csh_A           72 AKRFMWRDSFHRHVTSCTK   90 (110)
T ss_dssp             CCEESCHHHHHHHHHHHHH
T ss_pred             cchhcCHHHHHHHHHHccc
Confidence            9999999999999998776

>1wjp_A Zinc finger protein 295; ZF-C2H2 domain, zinc binding, nucleic acid binding, KIAA1227 protein, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.53  E-value=8e-15  Score=120.02  Aligned_cols=81  Identities=10%  Similarity=0.046  Sum_probs=72.5

Q ss_pred             CCCCccc-cCccCcccCChHHHHHHhh--ccccccccccCccCCchhhHhhhhhhccCcccccCCCCCCCCccceeecCC
Q 015460            7 RVSSKVW-CYYCDREFDDEKILVQHQK--AKHFKCHVCHKKLSTAGGMAIHVLQVHKENVTKVPNAKPGRESTDIEIYGM   83 (406)
Q Consensus         7 r~gEKp~-C~~CgK~Fs~ks~Lk~H~R--EKPfkC~~CgksFss~s~LkrH~rthHgek~~~Cp~~~~~r~s~~c~iCG~   83 (406)
                      +.+++.| |.+|++.|.....|++|++  +++|+|.+|++.|.+...|++|++ |+++++            |.|++|++
T Consensus        11 h~~~~~~~C~~C~~~f~~~~~l~~H~~~H~~~~~C~~C~~~f~~~~~l~~H~~-H~~~~~------------~~C~~C~~   77 (107)
T 1wjp_A           11 VENKEVYQCRLCNAKLSSLLEQGSHERLCRNAAVCPYCSLRFFSPELKQEHES-KCEYKK------------LTCLECMR   77 (107)
T ss_dssp             CCCCCCCBCTTTCCBCSSHHHHHHHHHHHHHSBCCTTTCCCBSSHHHHHHHHH-HCSTGG------------GEEGGGTE
T ss_pred             cCCCcCeECCCCCCccCCHHHHHHHHHHCCCCccCCCCCCccCCHHHHHHHHH-cCCCCC------------ccCccccc
Confidence            4477888 9999999999999999999  899999999999999999999985 777654            66778999


Q ss_pred             CCCCHhHHHHHhh-hccC
Q 015460           84 QGIPPDVLAAHYG-EEEE  100 (406)
Q Consensus        84 ~fi~~~~L~~H~k-~he~  100 (406)
                      .|.....|+.|++ .|.+
T Consensus        78 ~f~~~~~L~~H~~~~H~~   95 (107)
T 1wjp_A           78 TFKSSFSIWRHQVEVHNQ   95 (107)
T ss_dssp             ECSSHHHHHHHHHHTSCC
T ss_pred             hhCCHHHHHHHHHHHcCC
Confidence            9999999999997 7765

>4gzn_C ZFP-57, zinc finger protein 57; transcription-DNA complex; HET: DNA 5CM; 0.99A {Mus musculus}

Probab=99.52  E-value=4.6e-15  Score=112.37  Aligned_cols=53  Identities=17%  Similarity=0.465  Sum_probs=46.6

Q ss_pred             Cccc-cCccCcccCChHHHHHHhh----ccccccccccCccCCchhhHhhhhhhccCc
Q 015460           10 SKVW-CYYCDREFDDEKILVQHQK----AKHFKCHVCHKKLSTAGGMAIHVLQVHKEN   62 (406)
Q Consensus        10 EKp~-C~~CgK~Fs~ks~Lk~H~R----EKPfkC~~CgksFss~s~LkrH~rthHgek   62 (406)
                      ||+| |.+|||.|.+...|++|++    +|+|+|.+|+++|.+.++|++|+++|++++
T Consensus         2 EKpy~C~~C~k~F~~~~~L~~H~~~Ht~ekp~~C~~C~k~F~~~~~L~~H~~~Htgep   59 (60)
T 4gzn_C            2 ERPFFCNFCGKTYRDASGLSRHRRAHLGYRPRSCPECGKCFRDQSEVNRHLKVHQNKP   59 (60)
T ss_dssp             CCCEECTTTCCEESSHHHHHHHHHHHHTCCCEECTTTCCEESSHHHHHHHGGGGSCC-
T ss_pred             CCCccCCCCCCEeCCHHHHHHHHHHhCCCcCeECCCCCCCcCCHHHHHHHhCccCCCC
Confidence            7888 9999999999999999988    899999999999999999999998887764

>2kmk_A Zinc finger protein GFI-1; tandem repeat zinc finger domain, protein-DNA complex, DNA-B metal-binding, nucleus; HET: DNA; NMR {Rattus norvegicus}

Probab=99.52  E-value=6.9e-15  Score=113.52  Aligned_cols=75  Identities=19%  Similarity=0.384  Sum_probs=68.8

Q ss_pred             cCccCcccCChHHHHHHhh----ccccccccccCccCCchhhHhhhhhhccCcccccCCCCCCCCccceeecCCCCCCHh
Q 015460           14 CYYCDREFDDEKILVQHQK----AKHFKCHVCHKKLSTAGGMAIHVLQVHKENVTKVPNAKPGRESTDIEIYGMQGIPPD   89 (406)
Q Consensus        14 C~~CgK~Fs~ks~Lk~H~R----EKPfkC~~CgksFss~s~LkrH~rthHgek~~~Cp~~~~~r~s~~c~iCG~~fi~~~   89 (406)
                      |.+|++.|.....|.+|++    +++|+|.+|++.|.++..|.+|++.|++++.            +.|.+|++.|....
T Consensus         4 C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~------------~~C~~C~~~f~~~~   71 (82)
T 2kmk_A            4 CKICGKSFKRSSTLSTHLLIHSDTRPYPCQYCGKRFHQKSDMKKHTFIHTGEKP------------HKCQVCGKAFSQSS   71 (82)
T ss_dssp             CSSSCCEESSHHHHHHHHHHHHTCCCEECSSSCCEESSHHHHHHHHHHHHTCCC------------EECTTTSCEESSHH
T ss_pred             CCCCcccccCchhHHHHHHHcCCCCCeeCCcCChhhCCHHHHHHHHHHhcCCCC------------CcCCCcchhhCChH
Confidence            9999999999999999998    8999999999999999999999999988765            45567999999999


Q ss_pred             HHHHHhhhccC
Q 015460           90 VLAAHYGEEEE  100 (406)
Q Consensus        90 ~L~~H~k~he~  100 (406)
                      .|.+|++.|.+
T Consensus        72 ~l~~H~~~H~g   82 (82)
T 2kmk_A           72 NLITHSRKHTG   82 (82)
T ss_dssp             HHHHHHHHHC-
T ss_pred             HHHHHHHhhCC
Confidence            99999998863

>1a1h_A QGSR zinc finger peptide; complex (zinc finger/DNA), DNA-binding protein, transcription/DNA complex; HET: DNA; 1.60A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1jk2_A 1jk1_A 1a1g_A* 1a1f_A* 1a1i_A* 1a1j_A* 1a1k_A* 1aay_A* 1a1l_A* 1p47_A 1zaa_C* 1g2f_C 1g2d_C

Probab=99.52  E-value=8.6e-15  Score=115.14  Aligned_cols=80  Identities=23%  Similarity=0.426  Sum_probs=71.3

Q ss_pred             CCccc-cC--ccCcccCChHHHHHHhh----ccccccccccCccCCchhhHhhhhhhccCcccccCCCCCCCCccceeec
Q 015460            9 SSKVW-CY--YCDREFDDEKILVQHQK----AKHFKCHVCHKKLSTAGGMAIHVLQVHKENVTKVPNAKPGRESTDIEIY   81 (406)
Q Consensus         9 gEKp~-C~--~CgK~Fs~ks~Lk~H~R----EKPfkC~~CgksFss~s~LkrH~rthHgek~~~Cp~~~~~r~s~~c~iC   81 (406)
                      ++++| |.  .|++.|.....|.+|++    +++|.|.+|++.|.+...|++|+++|++++.            +.|.+|
T Consensus         1 ~~k~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~------------~~C~~C   68 (90)
T 1a1h_A            1 MERPYACPVESCDRRFSQSGSLTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTHTGEKP------------FACDIC   68 (90)
T ss_dssp             --CCEECCSSSCCCEESSHHHHHHHHHHHHCCCCEECTTTCCEESCHHHHHHHHHHHHCCCC------------EECTTT
T ss_pred             CCCceECCCCCCCCccCCHHHHHHHHHHhCCCCCccCCCCCcccCCHHHHHHHHHHcCCCCC------------ccCCCC
Confidence            46778 98  69999999999999998    8999999999999999999999999988765            455679


Q ss_pred             CCCCCCHhHHHHHhhhccC
Q 015460           82 GMQGIPPDVLAAHYGEEEE  100 (406)
Q Consensus        82 G~~fi~~~~L~~H~k~he~  100 (406)
                      ++.|.....|..|++.|.+
T Consensus        69 ~~~f~~~~~l~~H~~~H~~   87 (90)
T 1a1h_A           69 GRKFARSDERKRHTKIHLR   87 (90)
T ss_dssp             CCEESSHHHHHHHHGGGGC
T ss_pred             CchhCCHHHHHHHHHHhcc
Confidence            9999999999999999875

>2dlq_A GLI-kruppel family member HKR3; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.50  E-value=2.3e-14  Score=118.75  Aligned_cols=92  Identities=20%  Similarity=0.251  Sum_probs=75.0

Q ss_pred             CCccc-cCccCcccCChHHHHHHhh----ccccccccccCccCCchhhHhhhhhh---ccCcccccCCCC----------
Q 015460            9 SSKVW-CYYCDREFDDEKILVQHQK----AKHFKCHVCHKKLSTAGGMAIHVLQV---HKENVTKVPNAK----------   70 (406)
Q Consensus         9 gEKp~-C~~CgK~Fs~ks~Lk~H~R----EKPfkC~~CgksFss~s~LkrH~rth---Hgek~~~Cp~~~----------   70 (406)
                      +++.+ |.+|++.|.....|++|++    +++|+|.+|++.|.+...|++|++.+   .+++.|.|..|.          
T Consensus         4 ~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~C~~C~~~f~~~~~l~   83 (124)
T 2dlq_A            4 GSSGVECPTCHKKFLSKYYLKVHNRKHTGEKPFECPKCGKCYFRKENLLEHEARNCMNRSEQVFTCSVCQETFRRRMELR   83 (124)
T ss_dssp             CCSSCCCTTTCCCCSSHHHHHHHHHHHSSCCSCBCTTTCCBCSSHHHHHHHHHHCCCCSCCCCEECSSSCCEESSHHHHH
T ss_pred             CCCCCCCCCCCCcCCCHHHHHHHHHhCCCCCCeECCCCCchhcCHHHHHHHHhhhhcCCCCCCeECCCCCCccCCHHHHH
Confidence            56677 9999999999999999988    78999999999999999999998863   466778887642          


Q ss_pred             ------CCCCccceeecCCCCCCHhHHHHHhhh-ccC
Q 015460           71 ------PGRESTDIEIYGMQGIPPDVLAAHYGE-EEE  100 (406)
Q Consensus        71 ------~~r~s~~c~iCG~~fi~~~~L~~H~k~-he~  100 (406)
                            .+...|.|.+|++.|.....|.+|++. |.+
T Consensus        84 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~  120 (124)
T 2dlq_A           84 LHMVSHTGEMPYKCSSCSQQFMQKKDLQSHMIKLHSG  120 (124)
T ss_dssp             HHHHHHSSSCSEECSSSCCEESSHHHHHHHHHHTSSC
T ss_pred             HHHHHcCCCCCccCCCccchhCCHHHHHHHHHHHCCC
Confidence                  234457888999999999999999874 544

>2jp9_A Wilms tumor 1; DNA binding, nucleic acid recognition, X-RAY; HET: DNA; NMR {Homo sapiens} PDB: 2jpa_A* 2prt_A*

Probab=99.50  E-value=1.9e-14  Score=118.56  Aligned_cols=90  Identities=16%  Similarity=0.323  Sum_probs=70.9

Q ss_pred             CCccc-cCc--cCcccCChHHHHHHhh----ccccccc--cccCccCCchhhHhhhhhhccCcccccCCCCC--------
Q 015460            9 SSKVW-CYY--CDREFDDEKILVQHQK----AKHFKCH--VCHKKLSTAGGMAIHVLQVHKENVTKVPNAKP--------   71 (406)
Q Consensus         9 gEKp~-C~~--CgK~Fs~ks~Lk~H~R----EKPfkC~--~CgksFss~s~LkrH~rthHgek~~~Cp~~~~--------   71 (406)
                      +++.| |.+  |++.|.....|.+|++    +++|+|.  .|++.|.+...|++|++.|++++.|.|..+..        
T Consensus         3 ~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l   82 (119)
T 2jp9_A            3 EKRPFMCAYPGCNKRYFKLSHLQMHSRKHTGEKPYQCDFKDCERRFSRSDQLKRHQRRHTGVKPFQCKTCQRKFSRSDHL   82 (119)
T ss_dssp             SSCCBCCCSTTSCCCBSCHHHHHHHHHHHHTTCCEECCSTTCCCEESSHHHHHHHHHHHHCCCCEECTTTCCEESCHHHH
T ss_pred             CCeeeeCCCCCCcchhCCHHHHHHHHHhhCCCCCccCCCCCCcCccCCHHHHHHHHHHcCCCCCccCCccCchhCCHHHH
Confidence            56777 987  9999999999999988    7899999  79999999999999999999888777765321        


Q ss_pred             --------CCCccce--eecCCCCCCHhHHHHHhhhc
Q 015460           72 --------GRESTDI--EIYGMQGIPPDVLAAHYGEE   98 (406)
Q Consensus        72 --------~r~s~~c--~iCG~~fi~~~~L~~H~k~h   98 (406)
                              +...+.|  .+||+.|.....|.+|++.|
T Consensus        83 ~~H~~~h~~~~~~~C~~~~C~~~f~~~~~L~~H~~~H  119 (119)
T 2jp9_A           83 KTHTRTHTGEKPFSCRWPSCQKKFARSDELVRHHNMH  119 (119)
T ss_dssp             HHHHHHHHTCCCEECCSTTCCCEESSHHHHHHHHHTC
T ss_pred             HHHHHHhcCCCCeeCCCCCCccccCCHHHHHHHHhcC
Confidence                    2234566  56777777777777776654

>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C*

Probab=99.49  E-value=2.1e-14  Score=128.67  Aligned_cols=92  Identities=25%  Similarity=0.396  Sum_probs=64.2

Q ss_pred             CCccc-cCccCcccCChHHHHHHhh----ccccccccccCccCCchhhHhhhhhhccCcccccCCCCC------------
Q 015460            9 SSKVW-CYYCDREFDDEKILVQHQK----AKHFKCHVCHKKLSTAGGMAIHVLQVHKENVTKVPNAKP------------   71 (406)
Q Consensus         9 gEKp~-C~~CgK~Fs~ks~Lk~H~R----EKPfkC~~CgksFss~s~LkrH~rthHgek~~~Cp~~~~------------   71 (406)
                      +++.+ |.+|++.|.....|.+|++    +++|+|.+|++.|.+...|++|++.|++++.|.|..+..            
T Consensus        46 ~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~  125 (190)
T 2i13_A           46 GEKPYKCPECGKSFSDKKDLTRHQRTHTGEKPYKCPECGKSFSQRANLRAHQRTHTGEKPYACPECGKSFSQLAHLRAHQ  125 (190)
T ss_dssp             --CCEECTTTCCEESSHHHHHHHHHHHHCCCCEECTTTCCEESCHHHHHHHHHHHHTCCCEECTTTCCEESSHHHHHHHH
T ss_pred             CCCCccCCCcCchhCCHHHHHHHHHhcCCCCCccCcccCCccCCHHHHHHHHHhcCCCCCCcCCCCCCccCCHHHHHHHH
Confidence            55566 7777777777777777776    677777777777777777777777777777777776421            


Q ss_pred             ----CCCccceeecCCCCCCHhHHHHHhhhccC
Q 015460           72 ----GRESTDIEIYGMQGIPPDVLAAHYGEEEE  100 (406)
Q Consensus        72 ----~r~s~~c~iCG~~fi~~~~L~~H~k~he~  100 (406)
                          +...+.|.+||+.|.....|..|++.|.+
T Consensus       126 ~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~  158 (190)
T 2i13_A          126 RTHTGEKPYKCPECGKSFSREDNLHTHQRTHTG  158 (190)
T ss_dssp             HHHHCCCCEECTTTCCEESCHHHHHHHHHHHHC
T ss_pred             HHhCCCCCeECCCCCcccCCHHHHHHHHHhcCC
Confidence                23446677777777777777777777654

>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C*

Probab=99.46  E-value=4.3e-14  Score=126.64  Aligned_cols=92  Identities=24%  Similarity=0.360  Sum_probs=43.4

Q ss_pred             CCccc-cCccCcccCChHHHHHHhh----ccccccccccCccCCchhhHhhhhhhccCcccccCCCCC------------
Q 015460            9 SSKVW-CYYCDREFDDEKILVQHQK----AKHFKCHVCHKKLSTAGGMAIHVLQVHKENVTKVPNAKP------------   71 (406)
Q Consensus         9 gEKp~-C~~CgK~Fs~ks~Lk~H~R----EKPfkC~~CgksFss~s~LkrH~rthHgek~~~Cp~~~~------------   71 (406)
                      +++.| |.+|++.|.....|.+|++    +++|+|.+|++.|.+...|++|++.|++++.|.|..+..            
T Consensus        18 ~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~   97 (190)
T 2i13_A           18 GEKPYACPECGKSFSRSDHLAEHQRTHTGEKPYKCPECGKSFSDKKDLTRHQRTHTGEKPYKCPECGKSFSQRANLRAHQ   97 (190)
T ss_dssp             -------------CCSSHHHHHGGGCC---CCEECTTTCCEESSHHHHHHHHHHHHCCCCEECTTTCCEESCHHHHHHHH
T ss_pred             CCCCCcCCCCccccCCHHHHHHHHHHcCCCCCccCCCcCchhCCHHHHHHHHHhcCCCCCccCcccCCccCCHHHHHHHH
Confidence            44445 5555555555555555555    455555555555555555555555555555555554321            


Q ss_pred             ----CCCccceeecCCCCCCHhHHHHHhhhccC
Q 015460           72 ----GRESTDIEIYGMQGIPPDVLAAHYGEEEE  100 (406)
Q Consensus        72 ----~r~s~~c~iCG~~fi~~~~L~~H~k~he~  100 (406)
                          +...+.|.+|++.|.....|..|++.|.+
T Consensus        98 ~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~  130 (190)
T 2i13_A           98 RTHTGEKPYACPECGKSFSQLAHLRAHQRTHTG  130 (190)
T ss_dssp             HHHHTCCCEECTTTCCEESSHHHHHHHHHHHHC
T ss_pred             HhcCCCCCCcCCCCCCccCCHHHHHHHHHHhCC
Confidence                12334555555555555555555555543

>2ebt_A Krueppel-like factor 5; C2H2-type zinc-finger, metal BIND, transcription factor, kruppel-like factor, GC-box promoter elements, structural genomics; NMR {Homo sapiens}

Probab=99.45  E-value=8.3e-14  Score=111.54  Aligned_cols=80  Identities=18%  Similarity=0.363  Sum_probs=71.1

Q ss_pred             CCccc-cCc--cCcccCChHHHHHHhh----ccccccc--cccCccCCchhhHhhhhhhccCcccccCCCCCCCCcccee
Q 015460            9 SSKVW-CYY--CDREFDDEKILVQHQK----AKHFKCH--VCHKKLSTAGGMAIHVLQVHKENVTKVPNAKPGRESTDIE   79 (406)
Q Consensus         9 gEKp~-C~~--CgK~Fs~ks~Lk~H~R----EKPfkC~--~CgksFss~s~LkrH~rthHgek~~~Cp~~~~~r~s~~c~   79 (406)
                      .++.+ |.+  |++.|.....|++|++    +++|+|.  .|++.|.+...|.+|+++|++++.            |.|.
T Consensus        12 ~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~------------~~C~   79 (100)
T 2ebt_A           12 KRRIHYCDYPGCTKVYTKSSHLKAHLRTHTGEKPYKCTWEGCDWRFARSDELTRHYRKHTGAKP------------FQCG   79 (100)
T ss_dssp             SCCCEECCSSSCCCEESCHHHHHHHHHHHSCCCCEECCSSSCCCEESSHHHHHHHHHHHTSCCS------------CBCS
T ss_pred             cCcceEcCCCCCCCcccCHHHHHHHHHHhCCCCCeeCCCCCCCCccCCHHHHHHHHHHhCCCCC------------eECC
Confidence            34566 997  9999999999999998    7999996  699999999999999999988764            5667


Q ss_pred             ecCCCCCCHhHHHHHhhhccC
Q 015460           80 IYGMQGIPPDVLAAHYGEEEE  100 (406)
Q Consensus        80 iCG~~fi~~~~L~~H~k~he~  100 (406)
                      +|++.|.....|..|++.|.+
T Consensus        80 ~C~~~f~~~~~l~~H~~~H~~  100 (100)
T 2ebt_A           80 VCNRSFSRSDHLALHMKRHQN  100 (100)
T ss_dssp             SSCCBCSSHHHHHHHHHHHCC
T ss_pred             CCcCccCCHHHHHHHHHHhCC
Confidence            799999999999999999863

>2cot_A Zinc finger protein 435; ADK_LID domain, zinc finger and SCAN domain containing protein 16, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.45  E-value=7e-14  Score=107.94  Aligned_cols=60  Identities=18%  Similarity=0.375  Sum_probs=56.2

Q ss_pred             CCCCccc-cCccCcccCChHHHHHHhh----ccccccccccCccCCchhhHhhhhhhccCccccc
Q 015460            7 RVSSKVW-CYYCDREFDDEKILVQHQK----AKHFKCHVCHKKLSTAGGMAIHVLQVHKENVTKV   66 (406)
Q Consensus         7 r~gEKp~-C~~CgK~Fs~ks~Lk~H~R----EKPfkC~~CgksFss~s~LkrH~rthHgek~~~C   66 (406)
                      +.+++.| |.+|++.|.....|++|++    +++|+|.+|++.|.++..|++|+++|+++++|+|
T Consensus        13 ~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~~p~~C   77 (77)
T 2cot_A           13 QRERRRYKCDECGKSFSHSSDLSKHRRTHTGEKPYKCDECGKAFIQRSHLIGHHRVHTGSGPSSG   77 (77)
T ss_dssp             CCCSCSSBCSSSCCBCSCHHHHHHHHTTTCCSCSEECSSSCCEESSHHHHHHHGGGSCCCCCCCC
T ss_pred             CCCCCCEECCCCCcccCCHHHHHHHHHHcCCCcCeeCCCCCCccCCHHHHHHHHHHhCCCCCCCC
Confidence            4467888 9999999999999999998    8999999999999999999999999999998887

>2dmi_A Teashirt homolog 3; zinc finger protein 537, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.45  E-value=6.3e-14  Score=115.67  Aligned_cols=82  Identities=12%  Similarity=0.078  Sum_probs=71.3

Q ss_pred             CCCCccc-cCccCcccCChHHHHHHhh------ccc-cccccccCcc--CCchhhHhhhhhhccCcccccCCCCCCCCcc
Q 015460            7 RVSSKVW-CYYCDREFDDEKILVQHQK------AKH-FKCHVCHKKL--STAGGMAIHVLQVHKENVTKVPNAKPGREST   76 (406)
Q Consensus         7 r~gEKp~-C~~CgK~Fs~ks~Lk~H~R------EKP-fkC~~CgksF--ss~s~LkrH~rthHgek~~~Cp~~~~~r~s~   76 (406)
                      +.++++| |.+|+|.|..+..|++|++      +++ ++|.+|++.|  .+...|++|+++|+++++            |
T Consensus        14 H~~~~~~~C~~C~k~f~~~~~L~~H~~~~~h~~~~~~~~C~~C~~~f~f~~~~~l~~H~~~H~~~~~------------~   81 (115)
T 2dmi_A           14 FTGASKFRCKDCSAAYDTLVELTVHMNETGHYRDDNHETDNNNPKRWSKPRKRSLLEMEGKEDAQKV------------L   81 (115)
T ss_dssp             CCCCCSEEBSSSSCEESSHHHHHHHHHHTCCCBCSCCCCCCCCCSCCSSCCCCCCCCCCCSCCCCSS------------C
T ss_pred             eCCCCCEECCccCchhcCHHHHHHHHHHhCccccCCCccCCCCCcccccccHHHHHHHhhccCCCcc------------e
Confidence            4578888 9999999999999999987      344 4599999999  999999999999887764            5


Q ss_pred             ceeecCCCCCCHhHHHHHhhhccC
Q 015460           77 DIEIYGMQGIPPDVLAAHYGEEEE  100 (406)
Q Consensus        77 ~c~iCG~~fi~~~~L~~H~k~he~  100 (406)
                      .|++||+.|.....|.+|++.|..
T Consensus        82 ~C~~C~k~f~~~~~L~~H~~~hh~  105 (115)
T 2dmi_A           82 KCMYCGHSFESLQDLSVHMIKTKH  105 (115)
T ss_dssp             BCSSSCCBCSSHHHHHHHHHHTTT
T ss_pred             ECCCCCCccCCHHHHHHHHHHhCC
Confidence            567899999999999999998764

>1tf6_A Protein (transcription factor IIIA); complex (transcription regulation/DNA), RNA polymerase III, transcription initiation, zinc finger protein; HET: DNA; 3.10A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1tf3_A

Probab=99.44  E-value=1.3e-13  Score=123.59  Aligned_cols=100  Identities=21%  Similarity=0.228  Sum_probs=76.9

Q ss_pred             CCCCccCCCCccc-c--CccCcccCChHHHHHHhh----cccccc--ccccCccCCchhhHhhhhhhccCcccccC--CC
Q 015460            1 MGKKKKRVSSKVW-C--YYCDREFDDEKILVQHQK----AKHFKC--HVCHKKLSTAGGMAIHVLQVHKENVTKVP--NA   69 (406)
Q Consensus         1 M~rKkkr~gEKp~-C--~~CgK~Fs~ks~Lk~H~R----EKPfkC--~~CgksFss~s~LkrH~rthHgek~~~Cp--~~   69 (406)
                      |+.+....+++.| |  ..||+.|.....|.+|++    +++|+|  .+|++.|.+...|++|+++|++++.|.|.  .+
T Consensus         1 ~~~~~~~~~~~~~~C~~~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C   80 (190)
T 1tf6_A            1 MGEKALPVVYKRYICSFADCGAAYNKNWKLQAHLCKHTGEKPFPCKEEGCEKGFTSLHHLTRHSLTHTGEKNFTCDSDGC   80 (190)
T ss_dssp             ---------CCCCBCSSTTTCCBCSSHHHHHHHHHHHHCCCSSCCSSTTCCCCCSSHHHHHHHHTTTTTCCCEECCSSSC
T ss_pred             CccccccCCCcceeCCCCCCcchhCCHHHHHHHHHhcCCCCCccCCCCCCChhhCCHHHHHHHHHHccCCCceeCCCCCC
Confidence            5566666667777 8  679999999999999988    789999  88999999999999999999998888888  32


Q ss_pred             -----------------C-CCCCccce--eecCCCCCCHhHHHHHhhhccC
Q 015460           70 -----------------K-PGRESTDI--EIYGMQGIPPDVLAAHYGEEEE  100 (406)
Q Consensus        70 -----------------~-~~r~s~~c--~iCG~~fi~~~~L~~H~k~he~  100 (406)
                                       . .....+.|  ++||+.|.....|..|++.|.+
T Consensus        81 ~~~f~~~~~l~~H~~~~h~~~~~~~~C~~~~C~k~f~~~~~L~~H~~~H~~  131 (190)
T 1tf6_A           81 DLRFTTKANMKKHFNRFHNIKICVYVCHFENCGKAFKKHNQLKVHQFSHTQ  131 (190)
T ss_dssp             CCEESCHHHHHHHHHTTSSTTTSCCEECSSSSCEECSSHHHHHHHHGGGSS
T ss_pred             CCccCCHHHHHHHHHHhcCCCcceeeCCCCCCccccCCHHHHHHHHHHhCC
Confidence                             1 23456788  8899999999999999988876

>1ubd_C Protein (YY1 zinc finger domain); transcription initiation, initiator element, zinc finger protein, DNA- protein recognition; HET: DNA; 2.50A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1znm_A*

Probab=99.44  E-value=8.6e-14  Score=115.92  Aligned_cols=91  Identities=15%  Similarity=0.208  Sum_probs=67.3

Q ss_pred             Cccc-cC--ccCcccCChHHHHHHhh---ccccccccccCccCCchhhHhhhhhhccCcccccCC--CC-----------
Q 015460           10 SKVW-CY--YCDREFDDEKILVQHQK---AKHFKCHVCHKKLSTAGGMAIHVLQVHKENVTKVPN--AK-----------   70 (406)
Q Consensus        10 EKp~-C~--~CgK~Fs~ks~Lk~H~R---EKPfkC~~CgksFss~s~LkrH~rthHgek~~~Cp~--~~-----------   70 (406)
                      ++.+ |.  .|++.|.....|++|++   +++|+|.+|++.|.+...|.+|++.|++++.|.|..  +.           
T Consensus         3 ~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~   82 (124)
T 1ubd_C            3 PRTIACPHKGCTKMFRDNSAMRKHLHTHGPRVHVCAECGKAFVESSKLKRHQLVHTGEKPFQCTFEGCGKRFSLDFNLRT   82 (124)
T ss_dssp             --CEECCSTTCCCEESSHHHHHHHHGGGSCCCEECTTTCCEESSHHHHHHHGGGTSCCCCEECCSTTCCCEESCHHHHHH
T ss_pred             CCcccCCCCCCcCccCCHHHHHHHHHHcCCCCeECCCCCchhCCHHHHHHHHHHcCCCCCeeCCCCCCcCccCCHHHHHH
Confidence            3455 77  68888888888888877   677888888888888888888888887777777753  31           


Q ss_pred             -----CCCCcccee--ecCCCCCCHhHHHHHhhhccC
Q 015460           71 -----PGRESTDIE--IYGMQGIPPDVLAAHYGEEEE  100 (406)
Q Consensus        71 -----~~r~s~~c~--iCG~~fi~~~~L~~H~k~he~  100 (406)
                           .+...+.|.  .||+.|.....|.+|++.|.+
T Consensus        83 H~~~h~~~~~~~C~~~~C~~~f~~~~~L~~H~~~H~~  119 (124)
T 1ubd_C           83 HVRIHTGDRPYVCPFDGCNKKFAQSTNLKSHILTHAK  119 (124)
T ss_dssp             HHHHHHCCCCCCCCSTTCCCCCSSTTTTHHHHHHHC-
T ss_pred             HHHHhCCCCceECCCCCCCCccCCHHHHHHHHHHHcc
Confidence                 123457774  599999999999999988865

>2rpc_A Zinc finger protein ZIC 3; ZF-C2H2, zinc finger protein of the cerebellum 3, disease mutation, DNA-binding, metal-binding, nucleus, polymorphism; NMR {Homo sapiens}

Probab=99.43  E-value=2.6e-13  Score=117.45  Aligned_cols=92  Identities=16%  Similarity=0.129  Sum_probs=76.4

Q ss_pred             CCccc-cCccCcccCChHHHHHHhh-----ccc--------cccccccCccCCchhhHhhhhhhccCcccccCC--CC--
Q 015460            9 SSKVW-CYYCDREFDDEKILVQHQK-----AKH--------FKCHVCHKKLSTAGGMAIHVLQVHKENVTKVPN--AK--   70 (406)
Q Consensus         9 gEKp~-C~~CgK~Fs~ks~Lk~H~R-----EKP--------fkC~~CgksFss~s~LkrH~rthHgek~~~Cp~--~~--   70 (406)
                      .++.+ |.+|++.|.....|++|++     +++        |+|.+|++.|.....|.+|+++|++++.|.|..  +.  
T Consensus        22 ~~~~~~C~~C~~~f~~~~~L~~H~~~~H~~~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~  101 (155)
T 2rpc_A           22 AQLSRPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYWEECPREGKSFKAKYKLVNHIRVHTGEKPFPCPFPGCGKI  101 (155)
T ss_dssp             TCCSSSCCCCCCCBSSHHHHHHHHHTTTSCCTTCSSCCCCBTTCTTSSCCCSSHHHHHHHTHHHHCCCSEECSCTTTCCE
T ss_pred             hhcccccccCCcccCCHHHHHHHHHhhcCCCcccCCccccccCCCCcccccCCHHHHHHHHHhcCCCCcccCCcCCCCCc
Confidence            34455 9999999999999999987     232        889999999999999999999999999888875  42  


Q ss_pred             --------------CCCCccceee--cCCCCCCHhHHHHHhhhccC
Q 015460           71 --------------PGRESTDIEI--YGMQGIPPDVLAAHYGEEEE  100 (406)
Q Consensus        71 --------------~~r~s~~c~i--CG~~fi~~~~L~~H~k~he~  100 (406)
                                    .+.+.|.|.+  |++.|.....|.+|++.|.+
T Consensus       102 f~~~~~L~~H~~~h~~~~~~~C~~~~C~k~f~~~~~L~~H~~~H~~  147 (155)
T 2rpc_A          102 FARSENLKIHKRTHTGEKPFKCEFEGCDRRFANSSDRKKHMHVHTS  147 (155)
T ss_dssp             ESCHHHHHHHHTTTCSSCSBCCSSTTCCCCBSSHHHHHHSSTTTTS
T ss_pred             cCCHHHHHHHHHhhCCCCCccCCCCCCCCccCCHHHHHHHHHHhcC
Confidence                          2345688987  99999999999999998876

>2wbs_A Krueppel-like factor 4; transcription-DNA complex, DNA-binding, transcription, metal-binding, DNA, protein, nucleus, activator; 1.70A {Mus musculus} PDB: 2wbu_A

Probab=99.41  E-value=1.5e-13  Score=107.68  Aligned_cols=76  Identities=18%  Similarity=0.323  Sum_probs=68.7

Q ss_pred             ccc-cCc--cCcccCChHHHHHHhh----ccccccc--cccCccCCchhhHhhhhhhccCcccccCCCCCCCCccceeec
Q 015460           11 KVW-CYY--CDREFDDEKILVQHQK----AKHFKCH--VCHKKLSTAGGMAIHVLQVHKENVTKVPNAKPGRESTDIEIY   81 (406)
Q Consensus        11 Kp~-C~~--CgK~Fs~ks~Lk~H~R----EKPfkC~--~CgksFss~s~LkrH~rthHgek~~~Cp~~~~~r~s~~c~iC   81 (406)
                      +.+ |.+  |++.|.....|.+|++    +++|+|.  .|++.|.+...|.+|++.|++++.            +.|.+|
T Consensus         4 ~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~------------~~C~~C   71 (89)
T 2wbs_A            4 ATHTCDYAGCGKTYTKSSHLKAHLRTHTGEKPYHCDWDGCGWKFARSDELTRHYRKHTGHRP------------FQCQKC   71 (89)
T ss_dssp             CCEECCSTTTCCEESSHHHHHHHHTTSCSSCCEECCSTTTCCEESSHHHHHHHHHHHHCCCC------------EECSSS
T ss_pred             CCeeCCCCCCCCcCCCHHHHHHHHHhcCCCCCcCCCCCCCCCccCCHHHHHHHHHHcCCCCC------------ccCCCC
Confidence            345 999  9999999999999998    8999997  699999999999999999988765            556679


Q ss_pred             CCCCCCHhHHHHHhhhc
Q 015460           82 GMQGIPPDVLAAHYGEE   98 (406)
Q Consensus        82 G~~fi~~~~L~~H~k~h   98 (406)
                      ++.|.....|..|++.|
T Consensus        72 ~~~f~~~~~l~~H~~~H   88 (89)
T 2wbs_A           72 DRAFSRSDHLALHMKRH   88 (89)
T ss_dssp             SCEESSHHHHHHHGGGG
T ss_pred             CcccCCHHHHHHHHHhh
Confidence            99999999999999987

>4gzn_C ZFP-57, zinc finger protein 57; transcription-DNA complex; HET: DNA 5CM; 0.99A {Mus musculus}

Probab=99.41  E-value=9.7e-14  Score=105.06  Aligned_cols=58  Identities=17%  Similarity=0.205  Sum_probs=52.5

Q ss_pred             ccccccccccCccCCchhhHhhhhhhccCcccccCCCCCCCCccceeecCCCCCCHhHHHHHhhhccCCC
Q 015460           33 AKHFKCHVCHKKLSTAGGMAIHVLQVHKENVTKVPNAKPGRESTDIEIYGMQGIPPDVLAAHYGEEEEVP  102 (406)
Q Consensus        33 EKPfkC~~CgksFss~s~LkrH~rthHgek~~~Cp~~~~~r~s~~c~iCG~~fi~~~~L~~H~k~he~~~  102 (406)
                      ||||+|++|+++|.+..+|++|+++|.++++|.            |++||+.|.....|.+|+++|.+.+
T Consensus         2 EKpy~C~~C~k~F~~~~~L~~H~~~Ht~ekp~~------------C~~C~k~F~~~~~L~~H~~~Htgep   59 (60)
T 4gzn_C            2 ERPFFCNFCGKTYRDASGLSRHRRAHLGYRPRS------------CPECGKCFRDQSEVNRHLKVHQNKP   59 (60)
T ss_dssp             CCCEECTTTCCEESSHHHHHHHHHHHHTCCCEE------------CTTTCCEESSHHHHHHHGGGGSCC-
T ss_pred             CCCccCCCCCCEeCCHHHHHHHHHHhCCCcCeE------------CCCCCCCcCCHHHHHHHhCccCCCC
Confidence            799999999999999999999999999987655            5679999999999999999998754

>1llm_C Chimera of ZIF23-GCN4; dimerization, DNA recognition, leucine zipper, X-RAY crystallography, structure-based design, zinc fingers; 1.50A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 PDB: 1xf7_A

Probab=99.40  E-value=1.3e-14  Score=114.81  Aligned_cols=78  Identities=19%  Similarity=0.251  Sum_probs=70.2

Q ss_pred             Cccc-cCccCcccCChHHHHHHhh----ccccccccccCccCCchhhHhhhhhhccCcccccCCCCCCCCccceeecCCC
Q 015460           10 SKVW-CYYCDREFDDEKILVQHQK----AKHFKCHVCHKKLSTAGGMAIHVLQVHKENVTKVPNAKPGRESTDIEIYGMQ   84 (406)
Q Consensus        10 EKp~-C~~CgK~Fs~ks~Lk~H~R----EKPfkC~~CgksFss~s~LkrH~rthHgek~~~Cp~~~~~r~s~~c~iCG~~   84 (406)
                      |++| |.+|++.|.....|.+|++    +++|+|.+|++.|.+...|.+|++.||+ +            .+.|..|++.
T Consensus         1 ek~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~h~~-~------------~~~c~~C~~~   67 (88)
T 1llm_C            1 MKPFQCRICMRNFSRSDHLTTHIRTHTGEKPFACDICGRKFARSDERKRHRDIQHI-L------------PILEDKVEEL   67 (88)
T ss_dssp             CCCEECTTTCCEESCHHHHHHHHHHHHCCCCEECTTTCCEESSHHHHHHHHHHHTH-H------------HHHHHHHHHH
T ss_pred             CCCCcCCCCCCccCCHHHHHHHHHHcCCCCCccCCCCCCccCCHHHHHHHHHHhCC-C------------cchHHHHHHH
Confidence            5677 9999999999999999998    8999999999999999999999999985 2            4667889999


Q ss_pred             CCCHhHHHHHhhhccC
Q 015460           85 GIPPDVLAAHYGEEEE  100 (406)
Q Consensus        85 fi~~~~L~~H~k~he~  100 (406)
                      |.....|..|++.+.+
T Consensus        68 f~~~~~L~~H~~~~h~   83 (88)
T 1llm_C           68 LSKNYHLENEVARLKK   83 (88)
T ss_dssp             HHHHHHHHHHHHHHHH
T ss_pred             HHHHhhhHHHHHHHHH
Confidence            9999999999987543

>2lt7_A Transcriptional regulator kaiso; zinc finger, double helix, metal binding protein-DNA complex; HET: DNA; NMR {Homo sapiens} PDB: 4f6m_A* 4f6n_A*

Probab=99.39  E-value=1.8e-13  Score=118.69  Aligned_cols=76  Identities=18%  Similarity=0.350  Sum_probs=68.4

Q ss_pred             CCCccc-cCccCcccCChHHHHHHhh----ccccccccccCccCCchhhHhhhhhhccCcccccCCCCCCCCccceeecC
Q 015460            8 VSSKVW-CYYCDREFDDEKILVQHQK----AKHFKCHVCHKKLSTAGGMAIHVLQVHKENVTKVPNAKPGRESTDIEIYG   82 (406)
Q Consensus         8 ~gEKp~-C~~CgK~Fs~ks~Lk~H~R----EKPfkC~~CgksFss~s~LkrH~rthHgek~~~Cp~~~~~r~s~~c~iCG   82 (406)
                      .++++| |++||+.|.+...|.+|++    +++|+|.+|++.|.++..|++|+++||+++++.|.      ..+.|++|+
T Consensus        46 ~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~hh~~~p~~~~------k~~~C~~C~  119 (133)
T 2lt7_A           46 SWEKKYPCRYCEKVFPLAEYRTKHEIHHTGERRYQCLACGKSFINYQFMSSHIKSVHSQDPSGDS------KLYRLHPCR  119 (133)
T ss_dssp             HCCSCEECSSSSCEESSHHHHHHHHHHHHTCCCEEESSSCCEESSHHHHHHHHHHHTCCCTTSSS------CCEEECCCC
T ss_pred             CCCCCeeCCccCeecccccchhhhccccCCCccccCCCCCCCcCCHHHHHHHhHHhcCCCCCCCC------CCeecCCCC
Confidence            478888 9999999999999999998    89999999999999999999999999999876553      458899999


Q ss_pred             CCCCCHh
Q 015460           83 MQGIPPD   89 (406)
Q Consensus        83 ~~fi~~~   89 (406)
                      +.|+...
T Consensus       120 k~~~~~~  126 (133)
T 2lt7_A          120 SLQIRQY  126 (133)
T ss_dssp             SSCCCCC
T ss_pred             chhhhcc
Confidence            9988754

>2lce_A B-cell lymphoma 6 protein; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}

Probab=99.37  E-value=3.5e-13  Score=103.22  Aligned_cols=58  Identities=21%  Similarity=0.460  Sum_probs=52.9

Q ss_pred             CCCCccc-cCccCcccCChHHHHHHhh----ccccccccccCccCCchhhHhhhhhhccCccc
Q 015460            7 RVSSKVW-CYYCDREFDDEKILVQHQK----AKHFKCHVCHKKLSTAGGMAIHVLQVHKENVT   64 (406)
Q Consensus         7 r~gEKp~-C~~CgK~Fs~ks~Lk~H~R----EKPfkC~~CgksFss~s~LkrH~rthHgek~~   64 (406)
                      ..+++.| |.+|+|.|..+..|++|++    +++|+|.+|++.|.++..|++|+++|+++++|
T Consensus        12 ~~~~~~~~C~~C~k~f~~~~~l~~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~kp~   74 (74)
T 2lce_A           12 THSDKPYKCDRCQASFRYKGNLASHKTVHTGEKPYRCNICGAQFNRPANLKTHTRIHSGEKPY   74 (74)
T ss_dssp             CCCCCSBCCTTSSCCBSCHHHHHHHHHHHCCCCSEECTTTCCEESCHHHHHHHHHHHCCSCCC
T ss_pred             cCCCCCeECCCCCceeCCHHHHHHHHHHcCCCCCEECCCCCchhCCHHHHHHHHHhcCCCCCC
Confidence            3467788 9999999999999999998    89999999999999999999999999998764

>2j7j_A Transcription factor IIIA; zinc finger module, alternative initiation, nuclear protein, phosphorylation, hydrophobic core, zinc, RNA-binding; 1.65A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1un6_B 2hgh_A

Probab=99.35  E-value=4.4e-13  Score=103.76  Aligned_cols=71  Identities=20%  Similarity=0.307  Sum_probs=64.9

Q ss_pred             c--CccCcccCChHHHHHHhh----cccccccc--ccCccCCchhhHhhhhhhccCcccccCCCCCCCCccceee---cC
Q 015460           14 C--YYCDREFDDEKILVQHQK----AKHFKCHV--CHKKLSTAGGMAIHVLQVHKENVTKVPNAKPGRESTDIEI---YG   82 (406)
Q Consensus        14 C--~~CgK~Fs~ks~Lk~H~R----EKPfkC~~--CgksFss~s~LkrH~rthHgek~~~Cp~~~~~r~s~~c~i---CG   82 (406)
                      |  +.||+.|.....|++|++    +++|+|.+  |++.|.+...|++|+++|++               +.|.+   |+
T Consensus         4 C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~---------------~~C~~~~~C~   68 (85)
T 2j7j_A            4 CHFENCGKAFKKHNQLKVHQFSHTQQLPYECPHEGCDKRFSLPSRLKRHEKVHAG---------------YPCKKDDSCS   68 (85)
T ss_dssp             CCSTTCCCEESSHHHHHHHHHHHHTTCCEECCSTTCCCEESSHHHHHHHHHHHHS---------------EECCSCSSCC
T ss_pred             CCCCCCCcccCCHHHHHHHHHHhCCCCCeeCCCCCCcCccCCHHHHHHHHHHhCC---------------CCCCCCCCCC
Confidence            9  889999999999999998    89999998  99999999999999999886               44555   99


Q ss_pred             CCCCCHhHHHHHhhhcc
Q 015460           83 MQGIPPDVLAAHYGEEE   99 (406)
Q Consensus        83 ~~fi~~~~L~~H~k~he   99 (406)
                      +.|.....|.+|++.|.
T Consensus        69 ~~f~~~~~l~~H~~~hh   85 (85)
T 2j7j_A           69 FVGKTWTLYLKHVAECH   85 (85)
T ss_dssp             CEESSHHHHHHHHHHCC
T ss_pred             CccCCHHHHHHHHHhcC
Confidence            99999999999998763

>2gli_A Protein (five-finger GLI); protein/DNA complex, transcription/DNA complex; HET: DNA; 2.60A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.34  E-value=1.5e-12  Score=112.23  Aligned_cols=92  Identities=20%  Similarity=0.286  Sum_probs=69.4

Q ss_pred             CCCccc-cCc-----cCcccCChHHHHHHhh----cccccccc--ccCccCCchhhHhhhhhhccCcccccCC--CC---
Q 015460            8 VSSKVW-CYY-----CDREFDDEKILVQHQK----AKHFKCHV--CHKKLSTAGGMAIHVLQVHKENVTKVPN--AK---   70 (406)
Q Consensus         8 ~gEKp~-C~~-----CgK~Fs~ks~Lk~H~R----EKPfkC~~--CgksFss~s~LkrH~rthHgek~~~Cp~--~~---   70 (406)
                      .+++.+ |.+     |++.|.....|++|++    +++|+|.+  |++.|.+...|++|++.|++++.|.|..  +.   
T Consensus        30 ~~~~~~~C~~c~C~~c~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f  109 (155)
T 2gli_A           30 GERKEFVCHWGGCSRELRPFKAQYMLVVHMRRHTGEKPHKCTFEGCRKSYSRLENLKTHLRSHTGEKPYMCEHEGCSKAF  109 (155)
T ss_dssp             SCSSCCCCCBTTCTTTTCCCSSHHHHHHHTHHHHCCCCCCCCSTTCCCCCSSHHHHHHHHHHTTTCCCEECCSTTCCCEE
T ss_pred             CCCcceeCCCCCccchhhhhhhHHHHHHHHHhcCCCCCccCCCCCCCCcccCHHHHHHHHHHcCCCCCeeCCCCCCCCcc
Confidence            345555 664     3488888888888877    78888875  8888888888888888888888888774  31   


Q ss_pred             --------------CCCCccceee--cCCCCCCHhHHHHHhhhcc
Q 015460           71 --------------PGRESTDIEI--YGMQGIPPDVLAAHYGEEE   99 (406)
Q Consensus        71 --------------~~r~s~~c~i--CG~~fi~~~~L~~H~k~he   99 (406)
                                    .+.+.+.|.+  |++.|.....|..|++.|.
T Consensus       110 ~~~~~L~~H~~~~H~~~~~~~C~~~~C~~~f~~~~~L~~H~~~hh  154 (155)
T 2gli_A          110 SNASDRAKHQNRTHSNEKPYVCKLPGCTKRYTDPSSLRKHVKTVH  154 (155)
T ss_dssp             SSSSTTHHHHHHTTCSCCCEECCSTTTCCEESSHHHHHHHHHHSC
T ss_pred             CCHHHHHHHHHHhcCCCCCeeCCCCCCccccCCHHHHHHHHHhhc
Confidence                          2334567877  8888888888888888765

>2ghf_A ZHX1, zinc fingers and homeoboxes protein 1; C2H2 zinc fingers, 4-stranded parallel/anti-parallel beta- sheet, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.34  E-value=4.7e-13  Score=111.65  Aligned_cols=64  Identities=17%  Similarity=0.293  Sum_probs=57.9

Q ss_pred             CCCCccc-cCccCcccCChHHHHHHhh--------ccccccccccCccCCchhhHhh-hhhhccCcccccCCCC
Q 015460            7 RVSSKVW-CYYCDREFDDEKILVQHQK--------AKHFKCHVCHKKLSTAGGMAIH-VLQVHKENVTKVPNAK   70 (406)
Q Consensus         7 r~gEKp~-C~~CgK~Fs~ks~Lk~H~R--------EKPfkC~~CgksFss~s~LkrH-~rthHgek~~~Cp~~~   70 (406)
                      +.||++| |.+|||.|.++..|++|++        +++|+|.+|++.|.++..|++| +++|.++++|.|...+
T Consensus        13 ~~gekpy~C~~Cgk~F~~~~~L~~H~r~~H~~~~~ekpf~C~~Cgk~F~~~~~L~~H~~r~Htgekpy~C~~~~   86 (102)
T 2ghf_A           13 KKVEGGYECKYCTFQTPDLNMFTFHVDSEHPNVVLNSSYVCVECNFLTKRYDALSEHNLKYHPGEENFKLTMVK   86 (102)
T ss_dssp             CCCCSSEECSSCSCEESCHHHHHHHHHHHCSSCCCSCCEEETTTTEEESSTHHHHTHHHHTSTTCCCEEEEECC
T ss_pred             CCCCcCcCCCCCCCccCCHHHHHHHHHhhCCCCCCCCCcCCCCCCcccCCHHHHHHHHHHhcCCCCCeeCCccc
Confidence            4588999 9999999999999999975        4799999999999999999999 8999999999987643

>1x5w_A Zinc finger protein 64, isoforms 1; ZNF338, nuclear protein, DNA binding, transcription, C2H2 type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.32  E-value=8.5e-13  Score=99.97  Aligned_cols=57  Identities=19%  Similarity=0.398  Sum_probs=52.8

Q ss_pred             CCCCccc-cCccCcccCChHHHHHHhh----ccccccccccCccCCchhhHhhhhhhccCcc
Q 015460            7 RVSSKVW-CYYCDREFDDEKILVQHQK----AKHFKCHVCHKKLSTAGGMAIHVLQVHKENV   63 (406)
Q Consensus         7 r~gEKp~-C~~CgK~Fs~ks~Lk~H~R----EKPfkC~~CgksFss~s~LkrH~rthHgek~   63 (406)
                      ..++++| |.+|++.|.....|++|++    +++|+|.+|++.|.++..|++|+++||++++
T Consensus         4 ~~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~p   65 (70)
T 1x5w_A            4 GSSGHPEKCSECSYSCSSKAALRIHERIHCTDRPFKCNYCSFDTKQPSNLSKHMKKFHGDMS   65 (70)
T ss_dssp             CCCCCSEECSSSSCEESSHHHHHHHHGGGCCSCSEECSSSSCEESSHHHHHHHHHHHHSSSC
T ss_pred             CCCCCCeECCCCCcccCCHHHHHHHHHHcCCCCCEeCCCCCCccCCHHHHHHHHHHHhCCCC
Confidence            4567888 9999999999999999998    8999999999999999999999999999874

>1tf6_A Protein (transcription factor IIIA); complex (transcription regulation/DNA), RNA polymerase III, transcription initiation, zinc finger protein; HET: DNA; 3.10A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1tf3_A

Probab=99.32  E-value=2.7e-12  Score=114.88  Aligned_cols=92  Identities=22%  Similarity=0.315  Sum_probs=64.0

Q ss_pred             CCccc-c--CccCcccCChHHHHHHhh----ccccccc--cccCccCCchhhHhhhhhhc--cCccccc--CCCC-----
Q 015460            9 SSKVW-C--YYCDREFDDEKILVQHQK----AKHFKCH--VCHKKLSTAGGMAIHVLQVH--KENVTKV--PNAK-----   70 (406)
Q Consensus         9 gEKp~-C--~~CgK~Fs~ks~Lk~H~R----EKPfkC~--~CgksFss~s~LkrH~rthH--gek~~~C--p~~~-----   70 (406)
                      +++.+ |  .+|++.|.....|++|++    +++|+|.  .|++.|.+...|++|++.+|  +++.|.|  ..+.     
T Consensus        39 ~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~~h~~~~~~~~C~~~~C~k~f~~  118 (190)
T 1tf6_A           39 GEKPFPCKEEGCEKGFTSLHHLTRHSLTHTGEKNFTCDSDGCDLRFTTKANMKKHFNRFHNIKICVYVCHFENCGKAFKK  118 (190)
T ss_dssp             CCCSSCCSSTTCCCCCSSHHHHHHHHTTTTTCCCEECCSSSCCCEESCHHHHHHHHHTTSSTTTSCCEECSSSSCEECSS
T ss_pred             CCCCccCCCCCCChhhCCHHHHHHHHHHccCCCceeCCCCCCCCccCCHHHHHHHHHHhcCCCcceeeCCCCCCccccCC
Confidence            55566 7  667777777777777776    6777777  67777777777777774444  3456777  4431     


Q ss_pred             -----------CCCCccceee--cCCCCCCHhHHHHHhhhccC
Q 015460           71 -----------PGRESTDIEI--YGMQGIPPDVLAAHYGEEEE  100 (406)
Q Consensus        71 -----------~~r~s~~c~i--CG~~fi~~~~L~~H~k~he~  100 (406)
                                 .+.+.+.|.+  ||+.|.....|..|++.|.+
T Consensus       119 ~~~L~~H~~~H~~~~~~~C~~~~C~k~F~~~~~L~~H~~~H~~  161 (190)
T 1tf6_A          119 HNQLKVHQFSHTQQLPYECPHEGCDKRFSLPSRLKRHEKVHAG  161 (190)
T ss_dssp             HHHHHHHHGGGSSSCSSBCCSSSCCCBCSSHHHHHHHHTSSCS
T ss_pred             HHHHHHHHHHhCCCCCccCCCCCCCchhcCHHHHHHHHHHhCC
Confidence                       2334577766  88888888888888887776

>2dlk_A Novel protein; ZF-C2H2 domain, zinc finger protein 692, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.32  E-value=1.1e-12  Score=100.95  Aligned_cols=60  Identities=23%  Similarity=0.411  Sum_probs=52.9

Q ss_pred             CCCccc-cCc--cCcccCChHHHHHHhh-----cccccccc--ccCccCCchhhHhhhhhhccCcccccC
Q 015460            8 VSSKVW-CYY--CDREFDDEKILVQHQK-----AKHFKCHV--CHKKLSTAGGMAIHVLQVHKENVTKVP   67 (406)
Q Consensus         8 ~gEKp~-C~~--CgK~Fs~ks~Lk~H~R-----EKPfkC~~--CgksFss~s~LkrH~rthHgek~~~Cp   67 (406)
                      .+++.+ |..  |++.|..+..|++|++     +++|+|.+  |++.|.++..|++|+++|+++++|.|.
T Consensus         3 ~~~~~~~C~~~~C~~~f~~~~~L~~H~~~~H~~~~~~~C~~~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   72 (79)
T 2dlk_A            3 SGSSGMPCDFPGCGRIFSNRQYLNHHKKYQHIHQKSFSCPEPACGKSFNFKKHLKEHMKLHSDTRDYICE   72 (79)
T ss_dssp             SCCSSEECSSTTTCCEESSHHHHHHHHHHGGGSCCCEECSCTTTCCEESSHHHHHHHHHHHHTSCCCSCC
T ss_pred             CCCCCccCCCCCCcCccCCHHHHHHHHHHHhCCCCCeECCCCCCcCccCCHHHHHHHHHHhCCCCCeeCC
Confidence            356777 887  9999999999999986     89999999  999999999999999999988755543

>1x6e_A Zinc finger protein 24; ZNF24, KOX17, ZNF191, zscan3, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.30  E-value=1.4e-12  Score=99.50  Aligned_cols=58  Identities=31%  Similarity=0.547  Sum_probs=51.3

Q ss_pred             ccCCCCccc-cCccCcccCChHHHHHHhh----ccccccccccCccCCchhhHhhhhhhccCc
Q 015460            5 KKRVSSKVW-CYYCDREFDDEKILVQHQK----AKHFKCHVCHKKLSTAGGMAIHVLQVHKEN   62 (406)
Q Consensus         5 kkr~gEKp~-C~~CgK~Fs~ks~Lk~H~R----EKPfkC~~CgksFss~s~LkrH~rthHgek   62 (406)
                      +.+.++++| |.+|++.|.....|++|++    +++|+|.+|++.|.++..|++|+++|+++.
T Consensus         7 ~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~~   69 (72)
T 1x6e_A            7 GIHSGEKPYGCVECGKAFSRSSILVQHQRVHTGEKPYKCLECGKAFSQNSGLINHQRIHTSGP   69 (72)
T ss_dssp             CTTTTCCCEECSSSCCEESSHHHHHHHHHGGGCSCCEECSSSCCEESSHHHHHHHHHHHHSSS
T ss_pred             cccCCCCCccCCCCCCccCCHHHHHHHHHhcCCCCCeECCCCCcccCCHHHHHHHHHhcCCCC
Confidence            345578888 9999999999999999988    889999999999999999999999988764

>3uk3_C Zinc finger protein 217; transcription factor, DNA binding, DNA-metal BI protein complex; 2.10A {Homo sapiens}

Probab=99.29  E-value=1.4e-12  Score=94.32  Aligned_cols=52  Identities=27%  Similarity=0.552  Sum_probs=43.4

Q ss_pred             CCccc-cCccCcccCChHHHHHHhh----ccccccccccCccCCchhhHhhhhhhcc
Q 015460            9 SSKVW-CYYCDREFDDEKILVQHQK----AKHFKCHVCHKKLSTAGGMAIHVLQVHK   60 (406)
Q Consensus         9 gEKp~-C~~CgK~Fs~ks~Lk~H~R----EKPfkC~~CgksFss~s~LkrH~rthHg   60 (406)
                      ++++| |.+|++.|.....|.+|++    +++|+|.+|++.|.+...|.+|+++||+
T Consensus         1 g~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~hh~   57 (57)
T 3uk3_C            1 GSSSRECSYCGKFFRSNYYLNIHLRTHTGEKPYKCEFCEYAAAQKTSLRYHLERHHK   57 (57)
T ss_dssp             ----CBCTTTCCBCSCHHHHHHHHHHHHCCCCEECSSSSCEESSHHHHHHHHHHHC-
T ss_pred             CCCCccCCCCcchhCChHHHHHHHHHcCCCCCcCCCCCcchhCCHHHHHHHHHHhcC
Confidence            45677 9999999999999999988    8899999999999999999999988874

>1x6h_A Transcriptional repressor CTCF; zinc finger protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.29  E-value=3.2e-12  Score=99.47  Aligned_cols=62  Identities=26%  Similarity=0.468  Sum_probs=55.8

Q ss_pred             CCCCccc-cCccCcccCChHHHHHHhh----c----cccccccccCccCCchhhHhhhhhhccCcccccCC
Q 015460            7 RVSSKVW-CYYCDREFDDEKILVQHQK----A----KHFKCHVCHKKLSTAGGMAIHVLQVHKENVTKVPN   68 (406)
Q Consensus         7 r~gEKp~-C~~CgK~Fs~ks~Lk~H~R----E----KPfkC~~CgksFss~s~LkrH~rthHgek~~~Cp~   68 (406)
                      +.++++| |.+|++.|.....|++|++    +    ++|+|.+|++.|.+...|++|+++|++++.+.|..
T Consensus        10 H~~~k~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~~~~   80 (86)
T 1x6h_A           10 HTGEKPYACSHCDKTFRQKQLLDMHFKRYHDPNFVPAAFVCSKCGKTFTRRNTMARHADNCAGPDGVEGEN   80 (86)
T ss_dssp             CCCCCCEECSSSSCEESSHHHHHHHHHHTTCSSCCCCCEECSSSCCEESCHHHHHHHHHHCCCCCSCCCCC
T ss_pred             ecCCCCCcCCCCCCccCCHHHHHHHHHHhcCCcCCCcceECCCCCChhCCHHHHHHHHHHccCCCCcccCC
Confidence            4578888 9999999999999999987    3    78999999999999999999999999988776654

>2gqj_A Zinc finger protein KIAA1196; ZF-C2H2 like domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.28  E-value=2.4e-12  Score=104.58  Aligned_cols=55  Identities=20%  Similarity=0.391  Sum_probs=31.9

Q ss_pred             CCccc-cCccCcccC-ChHHHHHHhh-----ccccccccccCccCCchhhHhhhhhhccCcc
Q 015460            9 SSKVW-CYYCDREFD-DEKILVQHQK-----AKHFKCHVCHKKLSTAGGMAIHVLQVHKENV   63 (406)
Q Consensus         9 gEKp~-C~~CgK~Fs-~ks~Lk~H~R-----EKPfkC~~CgksFss~s~LkrH~rthHgek~   63 (406)
                      +++.| |.+|+|.|. .+..|++|++     +++|+|.+|++.|.++..|++|+++||++++
T Consensus        21 ~~~~~~C~~C~k~f~~~~~~L~~H~~~h~~~~~~~~C~~C~k~F~~~~~L~~H~~~h~~~kp   82 (98)
T 2gqj_A           21 ERGEAVCPTCNVVTRKTLVGLKKHMEVCQKLQDALKCQHCRKQFKSKAGLNYHTMAEHSAKP   82 (98)
T ss_dssp             TTSCCCCTTTCCCCSSCSHHHHHHHHHHHHHHHHHSCSSSCCCCSCHHHHHHHHHHHSCSCS
T ss_pred             cCCCcCCCCCCCChhhhHHHHHHHHHHHcCCCCCEECCCCCCccCCHHHHHHHHHHHcCCCC
Confidence            44555 666666666 5666655555     4556666666666666666666555555554

>2lv2_A Insulinoma-associated protein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}

Probab=99.23  E-value=6.3e-12  Score=101.45  Aligned_cols=52  Identities=23%  Similarity=0.551  Sum_probs=42.9

Q ss_pred             CCccc-cCccCcccCChHHHHHHhh----ccccccccccCccCCchhhHhhhhhhcc
Q 015460            9 SSKVW-CYYCDREFDDEKILVQHQK----AKHFKCHVCHKKLSTAGGMAIHVLQVHK   60 (406)
Q Consensus         9 gEKp~-C~~CgK~Fs~ks~Lk~H~R----EKPfkC~~CgksFss~s~LkrH~rthHg   60 (406)
                      .++.| |.+|||.|.++..|++|++    +|+|+|.+|+++|.++++|++|+++.|.
T Consensus        25 ~~~~h~C~~Cgk~F~~~~~L~~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~~H~   81 (85)
T 2lv2_A           25 SAECHLCPVCGESFASKGAQERHLRLLHAAQVFPCKYCPATFYSSPGLTRHINKCHP   81 (85)
T ss_dssp             CCTTEECTTSCCEESSHHHHHHHHHTTSCSSSEECTTSSCEESSHHHHHHHHHTTCT
T ss_pred             CCCCEECCCCCCCcCcHHHHhhhhhhccCCCccCCCCCCCEeCCHHHHHHhCcccCc
Confidence            45566 9999999999999999988    8889999999999999999999755443

>2gli_A Protein (five-finger GLI); protein/DNA complex, transcription/DNA complex; HET: DNA; 2.60A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.23  E-value=7.5e-12  Score=107.80  Aligned_cols=91  Identities=20%  Similarity=0.221  Sum_probs=74.6

Q ss_pred             Cccc-cCccCcccCChHHHHHHhh-------cccccccc-----ccCccCCchhhHhhhhhhccCcccccCC--CC----
Q 015460           10 SKVW-CYYCDREFDDEKILVQHQK-------AKHFKCHV-----CHKKLSTAGGMAIHVLQVHKENVTKVPN--AK----   70 (406)
Q Consensus        10 EKp~-C~~CgK~Fs~ks~Lk~H~R-------EKPfkC~~-----CgksFss~s~LkrH~rthHgek~~~Cp~--~~----   70 (406)
                      |..+ |+.|++.|.....|.+|++       +++|+|.+     |++.|.+...|++|++.|+++++|.|..  +.    
T Consensus         1 E~~~~C~~C~~~f~~~~~L~~H~~~~h~h~~~~~~~C~~c~C~~c~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~   80 (155)
T 2gli_A            1 ETDCRWDGCSQEFDSQEQLVHHINSEHIHGERKEFVCHWGGCSRELRPFKAQYMLVVHMRRHTGEKPHKCTFEGCRKSYS   80 (155)
T ss_dssp             CCBCCBTTCCCBCSCHHHHHHHHHHHTSSSCSSCCCCCBTTCTTTTCCCSSHHHHHHHTHHHHCCCCCCCCSTTCCCCCS
T ss_pred             CCcCCcCCCccccCCHHHHHHHHHhhccCCCCcceeCCCCCccchhhhhhhHHHHHHHHHhcCCCCCccCCCCCCCCccc
Confidence            3456 9999999999999999985       68999875     3499999999999999999999999873  31    


Q ss_pred             ------------CCCCccceee--cCCCCCCHhHHHHHh-hhccC
Q 015460           71 ------------PGRESTDIEI--YGMQGIPPDVLAAHY-GEEEE  100 (406)
Q Consensus        71 ------------~~r~s~~c~i--CG~~fi~~~~L~~H~-k~he~  100 (406)
                                  .+...+.|.+  |++.|.....|..|+ +.|.+
T Consensus        81 ~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~L~~H~~~~H~~  125 (155)
T 2gli_A           81 RLENLKTHLRSHTGEKPYMCEHEGCSKAFSNASDRAKHQNRTHSN  125 (155)
T ss_dssp             SHHHHHHHHHHTTTCCCEECCSTTCCCEESSSSTTHHHHHHTTCS
T ss_pred             CHHHHHHHHHHcCCCCCeeCCCCCCCCccCCHHHHHHHHHHhcCC
Confidence                        2334578887  888888888888887 67765

>2drp_A Protein (tramtrack DNA-binding domain); protein-DNA complex, double helix, transcription/DNA complex; HET: DNA; 2.80A {Drosophila melanogaster} SCOP: g.37.1.1 g.37.1.1

Probab=99.21  E-value=3.7e-12  Score=94.96  Aligned_cols=54  Identities=24%  Similarity=0.573  Sum_probs=46.4

Q ss_pred             CCCCccc-cCccCcccCChHHHHHHhh------ccccccccccCccCCchhhHhhhhhhcc
Q 015460            7 RVSSKVW-CYYCDREFDDEKILVQHQK------AKHFKCHVCHKKLSTAGGMAIHVLQVHK   60 (406)
Q Consensus         7 r~gEKp~-C~~CgK~Fs~ks~Lk~H~R------EKPfkC~~CgksFss~s~LkrH~rthHg   60 (406)
                      +.++++| |.+|++.|.....|.+|++      +++|+|.+|++.|.+++.|++|++.||+
T Consensus         5 h~~~k~~~C~~C~k~f~~~~~l~~H~~~~H~~~~~~~~C~~C~k~f~~~~~L~~H~~~~H~   65 (66)
T 2drp_A            5 KEGEHTYRCKVCSRVYTHISNFCRHYVTSHKRNVKVYPCPFCFKEFTRKDNMTAHVKIIHK   65 (66)
T ss_dssp             EEETTEEECTTTCCEESSHHHHHHHHHHHSSSSCCCEECTTTCCEESCHHHHHHHHHHHTC
T ss_pred             cCCCcceECCCCcchhCCHHHHHHHHHHHcCCCCcCeECCCCCCccCCHHHHHHHHHHHcC
Confidence            3467788 9999999999999998876      5889999999999999999999988886

>1bbo_A Human enhancer-binding protein MBP-1; DNA-binding protein; HET: ABA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 PDB: 3znf_A 4znf_A

Probab=99.21  E-value=7e-12  Score=90.64  Aligned_cols=49  Identities=18%  Similarity=0.504  Sum_probs=45.1

Q ss_pred             cCccCcccCChHHHHHHhh----ccccccccccCccCCchhhHhhhhhhccCc
Q 015460           14 CYYCDREFDDEKILVQHQK----AKHFKCHVCHKKLSTAGGMAIHVLQVHKEN   62 (406)
Q Consensus        14 C~~CgK~Fs~ks~Lk~H~R----EKPfkC~~CgksFss~s~LkrH~rthHgek   62 (406)
                      |.+|++.|.....|.+|++    +++|+|.+|++.|.+...|.+|+++|++++
T Consensus         4 C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~k   56 (57)
T 1bbo_A            4 CEECGIRXKKPSMLKKHIRTHTDVRPYHCTYCNFSFKTKGNLTKHMKSKAHSK   56 (57)
T ss_dssp             CTTTCCBCSSHHHHHHHHHHTSSCCCEECSSSSCEESSHHHHHHHHHSSSSCC
T ss_pred             CCCCcCcCCCHHHHHHHHHhcCCCCCccCCCCCchhcCHHHHHHHHHHhcccC
Confidence            9999999999999999988    789999999999999999999999988875

>2ct1_A Transcriptional repressor CTCF; CCCTC-BINDING factor, zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.21  E-value=8.8e-12  Score=96.03  Aligned_cols=56  Identities=20%  Similarity=0.544  Sum_probs=49.1

Q ss_pred             CCCCccc-cCccCcccCChHHHHHHhh------ccccccccccCccCCchhhHhhhhhhccCc
Q 015460            7 RVSSKVW-CYYCDREFDDEKILVQHQK------AKHFKCHVCHKKLSTAGGMAIHVLQVHKEN   62 (406)
Q Consensus         7 r~gEKp~-C~~CgK~Fs~ks~Lk~H~R------EKPfkC~~CgksFss~s~LkrH~rthHgek   62 (406)
                      +.++++| |.+|++.|..+..|++|++      +++|+|.+|++.|.++..|++|++++|+..
T Consensus        10 H~~~k~~~C~~C~k~f~~~~~L~~H~~~~h~~~~~~~~C~~C~~~f~~~~~L~~H~~~~H~~~   72 (77)
T 2ct1_A           10 HSGEKPYECYICHARFTQSGTMKMHILQKHTENVAKFHCPHCDTVIARKSDLGVHLRKQHSYS   72 (77)
T ss_dssp             CSCCCSEECTTTCCEESCHHHHHHHHHHHSSSSCSSEECSSSSCEESSHHHHHHHHHHTSCCS
T ss_pred             cCCCCCeECCCcCchhCCHHHHHHHHHHhcCCCCCccCCCCCCCccCCHHHHHHHHHHhCCCC
Confidence            4578888 9999999999999999975      279999999999999999999999888754

>2gqj_A Zinc finger protein KIAA1196; ZF-C2H2 like domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.19  E-value=9.8e-12  Score=100.91  Aligned_cols=69  Identities=17%  Similarity=0.084  Sum_probs=58.9

Q ss_pred             ccCChHHHHHHhh----ccccccccccCccC-CchhhHhhhhhhcc-CcccccCCCCCCCCccceeecCCCCCCHhHHHH
Q 015460           20 EFDDEKILVQHQK----AKHFKCHVCHKKLS-TAGGMAIHVLQVHK-ENVTKVPNAKPGRESTDIEIYGMQGIPPDVLAA   93 (406)
Q Consensus        20 ~Fs~ks~Lk~H~R----EKPfkC~~CgksFs-s~s~LkrH~rthHg-ek~~~Cp~~~~~r~s~~c~iCG~~fi~~~~L~~   93 (406)
                      .+.....+.+|++    +++|+|.+|++.|. ++..|++|+++|++ +++            |.|.+|++.|.....|.+
T Consensus         5 s~~~~~~~~~h~~~h~~~~~~~C~~C~k~f~~~~~~L~~H~~~h~~~~~~------------~~C~~C~k~F~~~~~L~~   72 (98)
T 2gqj_A            5 SSGPGGPEEQWQRAIHERGEAVCPTCNVVTRKTLVGLKKHMEVCQKLQDA------------LKCQHCRKQFKSKAGLNY   72 (98)
T ss_dssp             CCCCCCSCSHHHHTTTTTSCCCCTTTCCCCSSCSHHHHHHHHHHHHHHHH------------HSCSSSCCCCSCHHHHHH
T ss_pred             CCCCCCcHHHHHHHhccCCCcCCCCCCCChhhhHHHHHHHHHHHcCCCCC------------EECCCCCCccCCHHHHHH
Confidence            4555556667766    89999999999999 99999999999998 664            556779999999999999


Q ss_pred             HhhhccC
Q 015460           94 HYGEEEE  100 (406)
Q Consensus        94 H~k~he~  100 (406)
                      |++.|..
T Consensus        73 H~~~h~~   79 (98)
T 2gqj_A           73 HTMAEHS   79 (98)
T ss_dssp             HHHHHSC
T ss_pred             HHHHHcC
Confidence            9998876

>2d9h_A Zinc finger protein 692; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.19  E-value=1e-11  Score=95.73  Aligned_cols=55  Identities=25%  Similarity=0.424  Sum_probs=45.8

Q ss_pred             CCCccc-cCccCcccCChHHHHHHhh-------ccccccccccCccCCchhhHhhhhhhccCc
Q 015460            8 VSSKVW-CYYCDREFDDEKILVQHQK-------AKHFKCHVCHKKLSTAGGMAIHVLQVHKEN   62 (406)
Q Consensus         8 ~gEKp~-C~~CgK~Fs~ks~Lk~H~R-------EKPfkC~~CgksFss~s~LkrH~rthHgek   62 (406)
                      .++++| |.+|+|.|..+..|.+|++       +++|+|.+|++.|.++..|++|++.+|...
T Consensus         3 ~~~k~~~C~~C~k~f~~~~~L~~H~~~h~~~~~~~~~~C~~C~k~f~~~~~L~~H~~~~H~~~   65 (78)
T 2d9h_A            3 SGSSGLQCEICGFTCRQKASLNWHQRKHAETVAALRFPCEFCGKRFEKPDSVAAHRSKSHPAL   65 (78)
T ss_dssp             CSCCCEECSSSCCEESSHHHHHHHHHHHHHHTTTCCEECTTTCCEESSHHHHHHHHHHTSTTT
T ss_pred             CCCcCeECCCCCCeeCCHHHHHHHHHHhhccCCCcccCCCCCCchhCCHHHHHHHHHHhCCCC
Confidence            467888 9999999999999999887       378999999999999999999987666543

>2wbt_A B-129; zinc finger; 2.70A {Sulfolobus virus 1}

Probab=99.17  E-value=4.2e-12  Score=106.91  Aligned_cols=73  Identities=12%  Similarity=0.175  Sum_probs=63.3

Q ss_pred             cCccCcccC------ChHHHHHHhh---ccccccccccCccCCchhhHhhhhhhccCcccccCCCCCCCCccceeecCCC
Q 015460           14 CYYCDREFD------DEKILVQHQK---AKHFKCHVCHKKLSTAGGMAIHVLQVHKENVTKVPNAKPGRESTDIEIYGMQ   84 (406)
Q Consensus        14 C~~CgK~Fs------~ks~Lk~H~R---EKPfkC~~CgksFss~s~LkrH~rthHgek~~~Cp~~~~~r~s~~c~iCG~~   84 (406)
                      |++|++.|.      ....|..|++   +|+|+|.+|++.|.+..+|++|+++|  ++            .|.|++||+.
T Consensus        44 c~~~~~~~~~~~~~~~~~~l~~h~~h~~~~~~~C~~C~k~f~~~~~l~~H~~~H--~~------------~~~C~~C~k~  109 (129)
T 2wbt_A           44 RAIVKTLIHNPQLLDESSYLYRLLASKAISQFVCPLCLMPFSSSVSLKQHIRYT--EH------------TKVCPVCKKE  109 (129)
T ss_dssp             HHHHHHHHHCGGGTTTHHHHHHHHHHHHHCSEECTTTCCEESSHHHHHHHHHHT--CC------------CCBCTTTCCB
T ss_pred             chhhhcccCCCcccCCHHHHHHHHHhCCCCCeECCCCCcccCCHhHHHHHHHHC--CC------------CCCCCCCCcc
Confidence            777766654      7788888887   99999999999999999999999887  54            3567789999


Q ss_pred             CCCHhHHHHHhhhccC
Q 015460           85 GIPPDVLAAHYGEEEE  100 (406)
Q Consensus        85 fi~~~~L~~H~k~he~  100 (406)
                      |.....|..|++.|.+
T Consensus       110 f~~~~~l~~H~~~h~~  125 (129)
T 2wbt_A          110 FTSTDSALDHVCKKHN  125 (129)
T ss_dssp             CSSHHHHHHHHHHTTC
T ss_pred             cCCHHHHHHHHHHHCC
Confidence            9999999999998875

>2ee8_A Protein ODD-skipped-related 2; zinc binding, ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: k.12.1.1

Probab=99.17  E-value=1.6e-11  Score=99.42  Aligned_cols=59  Identities=22%  Similarity=0.495  Sum_probs=54.5

Q ss_pred             CCCccc-cCccCcccCChHHHHHHhh----ccccccccccCccCCchhhHhhhhhhccCccccc
Q 015460            8 VSSKVW-CYYCDREFDDEKILVQHQK----AKHFKCHVCHKKLSTAGGMAIHVLQVHKENVTKV   66 (406)
Q Consensus         8 ~gEKp~-C~~CgK~Fs~ks~Lk~H~R----EKPfkC~~CgksFss~s~LkrH~rthHgek~~~C   66 (406)
                      .+++.| |.+|++.|.....|++|++    +++|+|.+|++.|.+...|++|+++|+++++|.+
T Consensus        41 ~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~~~~~~  104 (106)
T 2ee8_A           41 TDERPYTCDICHKAFRRQDHLRDHRYIHSKEKPFKCQECGKGFCQSRTLAVHKTLHMQTSSPTA  104 (106)
T ss_dssp             CCSCCCBCSSSCCBCSCHHHHHHHGGGSCCCCTTSCSSSCCCCSSHHHHHHHHHHTTSCCCCCC
T ss_pred             CCCCCcCCCCccchhCCHHHHHHHHHHhCCCCCeECCCcCCcccCHHHHHHHHHHhCCCCCCcC
Confidence            467778 9999999999999999998    8999999999999999999999999999987654

>2ctd_A Zinc finger protein 512; zinc binding, two ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.16  E-value=3.3e-11  Score=98.45  Aligned_cols=70  Identities=14%  Similarity=0.151  Sum_probs=61.4

Q ss_pred             CcccCChHHHHHHhh----ccccccccccCcc-CCchhhHhhhhhhccCcccccCCCCCCCCccceeecCCCCCCHhHHH
Q 015460           18 DREFDDEKILVQHQK----AKHFKCHVCHKKL-STAGGMAIHVLQVHKENVTKVPNAKPGRESTDIEIYGMQGIPPDVLA   92 (406)
Q Consensus        18 gK~Fs~ks~Lk~H~R----EKPfkC~~CgksF-ss~s~LkrH~rthHgek~~~Cp~~~~~r~s~~c~iCG~~fi~~~~L~   92 (406)
                      ...|.....|.+|++    +++|+|++|++.| .++.+|++|+++| ++++            |.|++||+.|.....|+
T Consensus        13 ~~~~~~~~~~~~~~~~~~~~~~~~C~~C~k~F~~~~~~L~~H~~~h-~~k~------------~~C~~Cgk~F~~~~~L~   79 (96)
T 2ctd_A           13 PPVYAAGSLEEQWYLEIVDKGSVSCPTCQAVGRKTIEGLKKHMENC-KQEM------------FTCHHCGKQLRSLAGMK   79 (96)
T ss_dssp             CCSSCTTCHHHHHHHHHHHTSCEECTTTCSCEESSHHHHHHHHHHH-CCCC------------CCCSSSCCCCSSHHHHH
T ss_pred             CCCCCCchHHHHHHHHhcCCCCcCCCCCCCCcccCHHHHHHHHHHH-CCCC------------eECCCCCCeeCCHHHHH
Confidence            456788888998887    8999999999999 9999999999998 7654            56678999999999999


Q ss_pred             HH-hhhccC
Q 015460           93 AH-YGEEEE  100 (406)
Q Consensus        93 ~H-~k~he~  100 (406)
                      .| ++.|.+
T Consensus        80 ~H~~~~H~~   88 (96)
T 2ctd_A           80 YHVMANHNS   88 (96)
T ss_dssp             HHHHHHTCC
T ss_pred             HHhHHhcCC
Confidence            99 888875

>2ctd_A Zinc finger protein 512; zinc binding, two ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.15  E-value=2.2e-11  Score=99.43  Aligned_cols=53  Identities=25%  Similarity=0.421  Sum_probs=48.0

Q ss_pred             CCccc-cCccCccc-CChHHHHHHhh---ccccccccccCccCCchhhHhh-hhhhccC
Q 015460            9 SSKVW-CYYCDREF-DDEKILVQHQK---AKHFKCHVCHKKLSTAGGMAIH-VLQVHKE   61 (406)
Q Consensus         9 gEKp~-C~~CgK~F-s~ks~Lk~H~R---EKPfkC~~CgksFss~s~LkrH-~rthHge   61 (406)
                      ++++| |.+|+|.| ..+..|++|++   +|+|+|.+|+|.|.++..|++| +++|.++
T Consensus        31 ~~~~~~C~~C~k~F~~~~~~L~~H~~~h~~k~~~C~~Cgk~F~~~~~L~~H~~~~H~~~   89 (96)
T 2ctd_A           31 DKGSVSCPTCQAVGRKTIEGLKKHMENCKQEMFTCHHCGKQLRSLAGMKYHVMANHNSL   89 (96)
T ss_dssp             HTSCEECTTTCSCEESSHHHHHHHHHHHCCCCCCCSSSCCCCSSHHHHHHHHHHHTCCC
T ss_pred             CCCCcCCCCCCCCcccCHHHHHHHHHHHCCCCeECCCCCCeeCCHHHHHHHhHHhcCCC
Confidence            56777 99999999 99999999998   8999999999999999999999 7666544

>2ej4_A Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc binding, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.13  E-value=3.5e-11  Score=95.55  Aligned_cols=54  Identities=20%  Similarity=0.216  Sum_probs=49.2

Q ss_pred             cCccCcccCChHHHHHHhh-----ccc--------cccccccCccCCchhhHhhhhhhccCcccccC
Q 015460           14 CYYCDREFDDEKILVQHQK-----AKH--------FKCHVCHKKLSTAGGMAIHVLQVHKENVTKVP   67 (406)
Q Consensus        14 C~~CgK~Fs~ks~Lk~H~R-----EKP--------fkC~~CgksFss~s~LkrH~rthHgek~~~Cp   67 (406)
                      |.+|++.|.....|++|++     +++        |+|.+|++.|.++..|++|+++|+++++|.|.
T Consensus        28 C~~C~k~f~~~~~L~~H~~~~H~~~~~~~~~~c~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   94 (95)
T 2ej4_A           28 KKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYWEECPREGKSFKAKYKLVNHIRVHTGEKSGPSS   94 (95)
T ss_dssp             CCCCCCCCSSHHHHHHHHHHTTTCCTTCSCCCCCCTTCSSTTCCCSSHHHHHHHHHHHHTCCCCSSC
T ss_pred             ccccccccCCHHHHHHHHHHhccCCCCCCccceeccCCCCCCcccCCHHHHHHHHHhcCCCCCCCCC
Confidence            8899999999999999986     555        89999999999999999999999999999885

>2adr_A ADR1; transcription regulation, zinc finger,; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 g.37.1.1

Probab=99.11  E-value=4.2e-11  Score=87.52  Aligned_cols=48  Identities=23%  Similarity=0.632  Sum_probs=39.9

Q ss_pred             cc-cCccCcccCChHHHHHHhh----ccccccccccCccCCchhhHhhhhhhc
Q 015460           12 VW-CYYCDREFDDEKILVQHQK----AKHFKCHVCHKKLSTAGGMAIHVLQVH   59 (406)
Q Consensus        12 p~-C~~CgK~Fs~ks~Lk~H~R----EKPfkC~~CgksFss~s~LkrH~rthH   59 (406)
                      +| |.+|++.|.....|.+|++    +++|+|.+|++.|.++..|.+|++..|
T Consensus         2 ~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~H   54 (60)
T 2adr_A            2 SFVCEVCTRAFARQEHLKRHYRSHTNEKPYPCGLCNRAFTRRDLLIRHAQKIH   54 (60)
T ss_dssp             CBCCTTTCCCBSCHHHHHHHHHTTTSSCSEECTTTCCEESSHHHHHHHHTTTS
T ss_pred             cCcCCCCccccCCHHHHHHHHHHhCCCCCccCCCCCCccCCHHHHHHHHHHHc
Confidence            45 8889999999888988887    788889999999998888998864433

>2dlq_A GLI-kruppel family member HKR3; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.10  E-value=4.2e-11  Score=98.92  Aligned_cols=63  Identities=19%  Similarity=0.445  Sum_probs=57.9

Q ss_pred             CCCccc-cCccCcccCChHHHHHHhh-------ccccccccccCccCCchhhHhhhhhhccCcccccCCCC
Q 015460            8 VSSKVW-CYYCDREFDDEKILVQHQK-------AKHFKCHVCHKKLSTAGGMAIHVLQVHKENVTKVPNAK   70 (406)
Q Consensus         8 ~gEKp~-C~~CgK~Fs~ks~Lk~H~R-------EKPfkC~~CgksFss~s~LkrH~rthHgek~~~Cp~~~   70 (406)
                      .+++.+ |.+|++.|..+..|.+|++       +++|+|.+|++.|.+...|++|+++|+++++|.|..|.
T Consensus        31 ~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~  101 (124)
T 2dlq_A           31 TGEKPFECPKCGKCYFRKENLLEHEARNCMNRSEQVFTCSVCQETFRRRMELRLHMVSHTGEMPYKCSSCS  101 (124)
T ss_dssp             SSCCSCBCTTTCCBCSSHHHHHHHHHHCCCCSCCCCEECSSSCCEESSHHHHHHHHHHHSSSCSEECSSSC
T ss_pred             CCCCCeECCCCCchhcCHHHHHHHHhhhhcCCCCCCeECCCCCCccCCHHHHHHHHHHcCCCCCccCCCcc
Confidence            466777 9999999999999999975       78999999999999999999999999999999999854

>2dmd_A Zinc finger protein 64, isoforms 1 and 2; ZNF338, nuclear protein, DNA- binding, transcription, C2H2-type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.10  E-value=5.8e-11  Score=94.29  Aligned_cols=57  Identities=21%  Similarity=0.479  Sum_probs=52.5

Q ss_pred             CCCCccc-cCccCcccCChHHHHHHhh----ccccccccccCccCCchhhHhhhhhhccCcc
Q 015460            7 RVSSKVW-CYYCDREFDDEKILVQHQK----AKHFKCHVCHKKLSTAGGMAIHVLQVHKENV   63 (406)
Q Consensus         7 r~gEKp~-C~~CgK~Fs~ks~Lk~H~R----EKPfkC~~CgksFss~s~LkrH~rthHgek~   63 (406)
                      +.+++.+ |.+|++.|.....|.+|++    +++|+|.+|++.|.+...|.+|+++|++++.
T Consensus        31 h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~   92 (96)
T 2dmd_A           31 HTGVKPYKCKTCDYAAADSSSLNKHLRIHSDERPFKCQICPYASRNSSQLTVHLRSHTGDSG   92 (96)
T ss_dssp             CCCCCSEECSSSCCEESSHHHHHHHHHHSCCCCCEECSSSSCEESSHHHHHHHHTTCCSCCC
T ss_pred             cCCCCCEeCCCCCCccCCHHHHHHHHHHhCCCCCccCCCCCCccCCHHHHHHHHHHhcCCCC
Confidence            3467778 9999999999999999998    8999999999999999999999999998864

>1f2i_G Fusion of N-terminal 17-MER peptide extension to ZIF12; zinc finger, dimer, protein-DNA complex, cooperativity, transcription/DNA complex; 2.35A {Mus musculus} SCOP: g.37.1.1 g.37.1.1

Probab=99.08  E-value=7.6e-11  Score=89.48  Aligned_cols=52  Identities=25%  Similarity=0.616  Sum_probs=41.3

Q ss_pred             CCCCccc-cC--ccCcccCChHHHHHHhh----ccccccccccCccCCchhhHhhhhhh
Q 015460            7 RVSSKVW-CY--YCDREFDDEKILVQHQK----AKHFKCHVCHKKLSTAGGMAIHVLQV   58 (406)
Q Consensus         7 r~gEKp~-C~--~CgK~Fs~ks~Lk~H~R----EKPfkC~~CgksFss~s~LkrH~rth   58 (406)
                      ..+++.| |.  .|++.|..+..|++|++    +++|+|.+|++.|.+++.|.+|+++|
T Consensus        14 ~~~~~~~~C~~~~C~k~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~H   72 (73)
T 1f2i_G           14 VPKMRPYACPVESCDRRFSRSDELTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTH   72 (73)
T ss_dssp             CCCCCCEECSSTTBCCEESSHHHHHHHHHHHHCCCCEECTTTCCEESCHHHHHHHHTTC
T ss_pred             CCCCCccCCcCCCCCCccCCHHHHHHHHHhhCCCCCeECCCCCchhCCHHHHHHHHHhc
Confidence            3466777 86  48888888888888877    77888888888888888888888765

>1a1h_A QGSR zinc finger peptide; complex (zinc finger/DNA), DNA-binding protein, transcription/DNA complex; HET: DNA; 1.60A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1jk2_A 1jk1_A 1a1g_A* 1a1f_A* 1a1i_A* 1a1j_A* 1a1k_A* 1aay_A* 1a1l_A* 1p47_A 1zaa_C* 1g2f_C 1g2d_C

Probab=99.08  E-value=6.6e-11  Score=92.68  Aligned_cols=54  Identities=24%  Similarity=0.538  Sum_probs=49.5

Q ss_pred             CCccc-cCccCcccCChHHHHHHhh----ccccccccccCccCCchhhHhhhhhhccCc
Q 015460            9 SSKVW-CYYCDREFDDEKILVQHQK----AKHFKCHVCHKKLSTAGGMAIHVLQVHKEN   62 (406)
Q Consensus         9 gEKp~-C~~CgK~Fs~ks~Lk~H~R----EKPfkC~~CgksFss~s~LkrH~rthHgek   62 (406)
                      +++.+ |.+|++.|.....|++|++    +++|+|.+|++.|.++..|++|+++|++++
T Consensus        31 ~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~H~~~k   89 (90)
T 1a1h_A           31 GQKPFQCRICMRNFSRSDHLTTHIRTHTGEKPFACDICGRKFARSDERKRHTKIHLRQK   89 (90)
T ss_dssp             CCCCEECTTTCCEESCHHHHHHHHHHHHCCCCEECTTTCCEESSHHHHHHHHGGGGC--
T ss_pred             CCCCccCCCCCcccCCHHHHHHHHHHcCCCCCccCCCCCchhCCHHHHHHHHHHhcccC
Confidence            56777 9999999999999999998    899999999999999999999999999875

>2eod_A TNF receptor-associated factor 4; zinc binding, NF-KB, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.08  E-value=4.2e-11  Score=89.95  Aligned_cols=53  Identities=19%  Similarity=0.355  Sum_probs=47.5

Q ss_pred             CCccc-cCccCcccCChHHHHHHhh---ccccccc-cccCccCCchhhHhhhhhhccCc
Q 015460            9 SSKVW-CYYCDREFDDEKILVQHQK---AKHFKCH-VCHKKLSTAGGMAIHVLQVHKEN   62 (406)
Q Consensus         9 gEKp~-C~~CgK~Fs~ks~Lk~H~R---EKPfkC~-~CgksFss~s~LkrH~rthHgek   62 (406)
                      ++++| |.+|+|.|. ...|++|++   +++|+|. +|++.|..++.|++|+++|...+
T Consensus         7 ~~~~~~C~~C~k~f~-~~~L~~H~~~~~~~p~~C~~~C~k~f~~~~~L~~H~~~hc~~~   64 (66)
T 2eod_A            7 GKRTQPCTYCTKEFV-FDTIQSHQYQCPRLPVACPNQCGVGTVAREDLPGHLKDSCNTA   64 (66)
T ss_dssp             CCCEEECSSSCCEEE-HHHHHHHHHHCSSSEEECTTCCSCCEEETTTHHHHHHTTSSSC
T ss_pred             CCCCeeccccCCccC-HHHHHHHHHHcCCcCccCCcccCcccccHHHHHHHHHhhcccC
Confidence            56788 999999999 999999988   8999999 99999999999999998876543

>1x6e_A Zinc finger protein 24; ZNF24, KOX17, ZNF191, zscan3, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.06  E-value=6.1e-11  Score=90.27  Aligned_cols=61  Identities=20%  Similarity=0.153  Sum_probs=53.5

Q ss_pred             HhhccccccccccCccCCchhhHhhhhhhccCcccccCCCCCCCCccceeecCCCCCCHhHHHHHhhhccCCC
Q 015460           30 HQKAKHFKCHVCHKKLSTAGGMAIHVLQVHKENVTKVPNAKPGRESTDIEIYGMQGIPPDVLAAHYGEEEEVP  102 (406)
Q Consensus        30 H~REKPfkC~~CgksFss~s~LkrH~rthHgek~~~Cp~~~~~r~s~~c~iCG~~fi~~~~L~~H~k~he~~~  102 (406)
                      |..+|+|+|.+|++.|.+...|++|+++|+++++            |.|.+|++.|.....|.+|++.|.+.+
T Consensus         9 H~~~k~~~C~~C~k~f~~~~~L~~H~~~h~~~~~------------~~C~~C~~~f~~~~~L~~H~~~H~~~~   69 (72)
T 1x6e_A            9 HSGEKPYGCVECGKAFSRSSILVQHQRVHTGEKP------------YKCLECGKAFSQNSGLINHQRIHTSGP   69 (72)
T ss_dssp             TTTCCCEECSSSCCEESSHHHHHHHHHGGGCSCC------------EECSSSCCEESSHHHHHHHHHHHHSSS
T ss_pred             cCCCCCccCCCCCCccCCHHHHHHHHHhcCCCCC------------eECCCCCcccCCHHHHHHHHHhcCCCC
Confidence            4448999999999999999999999999988765            555779999999999999999998644

>2ctu_A Zinc finger protein 483; zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.05  E-value=8.3e-12  Score=93.94  Aligned_cols=59  Identities=14%  Similarity=0.225  Sum_probs=53.8

Q ss_pred             CCCCccc-cCccCcccCChHHHHHHhhccccccccccCccCCchhhHhhhhhhccCcccccCC
Q 015460            7 RVSSKVW-CYYCDREFDDEKILVQHQKAKHFKCHVCHKKLSTAGGMAIHVLQVHKENVTKVPN   68 (406)
Q Consensus         7 r~gEKp~-C~~CgK~Fs~ks~Lk~H~REKPfkC~~CgksFss~s~LkrH~rthHgek~~~Cp~   68 (406)
                      +.+++++ |.+||+.|.....|.+   +++|+|.+|++.|.+...|++|+++|+++++|.|..
T Consensus        13 h~~~~~~~C~~C~k~f~~~~~l~~---~~~~~C~~C~~~f~~~~~l~~H~~~H~~~~~~~C~~   72 (73)
T 2ctu_A           13 HLGDRSQKCSKCGIIFIRRSTLSR---RKTPMCEKCRKDSCQEAALNKDEGNESGKKTSGPSS   72 (73)
T ss_dssp             CCCCSEEECSSSCCEEECCCCCCC---SSSCCCHHHHHTCSCCCSSCCCSSCCCCCCCSSCCC
T ss_pred             hCCCCCeeCCcccchhCCHHHhCc---CCCCCCCCCChhhcCHHHHHHHHHhhcCCCCCCCCC
Confidence            4578888 9999999999998877   889999999999999999999999999999888864

>2wbt_A B-129; zinc finger; 2.70A {Sulfolobus virus 1}

Probab=99.04  E-value=6.5e-11  Score=99.55  Aligned_cols=54  Identities=24%  Similarity=0.420  Sum_probs=51.0

Q ss_pred             CCCccc-cCccCcccCChHHHHHHhh--ccccccccccCccCCchhhHhhhhhhccC
Q 015460            8 VSSKVW-CYYCDREFDDEKILVQHQK--AKHFKCHVCHKKLSTAGGMAIHVLQVHKE   61 (406)
Q Consensus         8 ~gEKp~-C~~CgK~Fs~ks~Lk~H~R--EKPfkC~~CgksFss~s~LkrH~rthHge   61 (406)
                      .++++| |.+|||.|.....|++|++  +++|+|.+|++.|.+.++|++|+++||++
T Consensus        70 ~~~~~~~C~~C~k~f~~~~~l~~H~~~H~~~~~C~~C~k~f~~~~~l~~H~~~h~~~  126 (129)
T 2wbt_A           70 KAISQFVCPLCLMPFSSSVSLKQHIRYTEHTKVCPVCKKEFTSTDSALDHVCKKHNI  126 (129)
T ss_dssp             HHHCSEECTTTCCEESSHHHHHHHHHHTCCCCBCTTTCCBCSSHHHHHHHHHHTTCC
T ss_pred             CCCCCeECCCCCcccCCHhHHHHHHHHCCCCCCCCCCCcccCCHHHHHHHHHHHCCc
Confidence            467888 9999999999999999999  89999999999999999999999999985

>2kmk_A Zinc finger protein GFI-1; tandem repeat zinc finger domain, protein-DNA complex, DNA-B metal-binding, nucleus; HET: DNA; NMR {Rattus norvegicus}

Probab=99.03  E-value=1.1e-10  Score=89.66  Aligned_cols=52  Identities=25%  Similarity=0.597  Sum_probs=48.3

Q ss_pred             CCccc-cCccCcccCChHHHHHHhh----ccccccccccCccCCchhhHhhhhhhcc
Q 015460            9 SSKVW-CYYCDREFDDEKILVQHQK----AKHFKCHVCHKKLSTAGGMAIHVLQVHK   60 (406)
Q Consensus         9 gEKp~-C~~CgK~Fs~ks~Lk~H~R----EKPfkC~~CgksFss~s~LkrH~rthHg   60 (406)
                      +++.+ |.+|++.|..+..|.+|++    +++|+|.+|++.|.++++|++|+++|+|
T Consensus        26 ~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~H~g   82 (82)
T 2kmk_A           26 DTRPYPCQYCGKRFHQKSDMKKHTFIHTGEKPHKCQVCGKAFSQSSNLITHSRKHTG   82 (82)
T ss_dssp             TCCCEECSSSCCEESSHHHHHHHHHHHHTCCCEECTTTSCEESSHHHHHHHHHHHC-
T ss_pred             CCCCeeCCcCChhhCCHHHHHHHHHHhcCCCCCcCCCcchhhCChHHHHHHHHhhCC
Confidence            56777 9999999999999999998    8999999999999999999999999875

>2jp9_A Wilms tumor 1; DNA binding, nucleic acid recognition, X-RAY; HET: DNA; NMR {Homo sapiens} PDB: 2jpa_A* 2prt_A*

Probab=99.03  E-value=1.3e-10  Score=95.45  Aligned_cols=61  Identities=28%  Similarity=0.598  Sum_probs=56.7

Q ss_pred             CCccc-cC--ccCcccCChHHHHHHhh----ccccccccccCccCCchhhHhhhhhhccCccccc--CCC
Q 015460            9 SSKVW-CY--YCDREFDDEKILVQHQK----AKHFKCHVCHKKLSTAGGMAIHVLQVHKENVTKV--PNA   69 (406)
Q Consensus         9 gEKp~-C~--~CgK~Fs~ks~Lk~H~R----EKPfkC~~CgksFss~s~LkrH~rthHgek~~~C--p~~   69 (406)
                      +++.+ |.  .|++.|.....|++|++    +++|+|.+|++.|.+...|++|+++|++++.|.|  +.+
T Consensus        33 ~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C  102 (119)
T 2jp9_A           33 GEKPYQCDFKDCERRFSRSDQLKRHQRRHTGVKPFQCKTCQRKFSRSDHLKTHTRTHTGEKPFSCRWPSC  102 (119)
T ss_dssp             TTCCEECCSTTCCCEESSHHHHHHHHHHHHCCCCEECTTTCCEESCHHHHHHHHHHHHTCCCEECCSTTC
T ss_pred             CCCCccCCCCCCcCccCCHHHHHHHHHHcCCCCCccCCccCchhCCHHHHHHHHHHhcCCCCeeCCCCCC
Confidence            56777 99  79999999999999998    8999999999999999999999999999999999  554

>2lv2_A Insulinoma-associated protein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}

Probab=99.02  E-value=4.5e-11  Score=96.43  Aligned_cols=56  Identities=18%  Similarity=0.240  Sum_probs=49.5

Q ss_pred             ccccccccccCccCCchhhHhhhhhhccCcccccCCCCCCCCccceeecCCCCCCHhHHHHHhh-hccC
Q 015460           33 AKHFKCHVCHKKLSTAGGMAIHVLQVHKENVTKVPNAKPGRESTDIEIYGMQGIPPDVLAAHYG-EEEE  100 (406)
Q Consensus        33 EKPfkC~~CgksFss~s~LkrH~rthHgek~~~Cp~~~~~r~s~~c~iCG~~fi~~~~L~~H~k-~he~  100 (406)
                      ++.|.|.+|++.|.++.+|++|+++|+++++|            .|++|++.|.....|.+|++ .|.+
T Consensus        26 ~~~h~C~~Cgk~F~~~~~L~~H~~~H~~~k~~------------~C~~C~k~F~~~~~L~~H~~~~H~~   82 (85)
T 2lv2_A           26 AECHLCPVCGESFASKGAQERHLRLLHAAQVF------------PCKYCPATFYSSPGLTRHINKCHPS   82 (85)
T ss_dssp             CTTEECTTSCCEESSHHHHHHHHHTTSCSSSE------------ECTTSSCEESSHHHHHHHHHTTCTT
T ss_pred             CCCEECCCCCCCcCcHHHHhhhhhhccCCCcc------------CCCCCCCEeCCHHHHHHhCcccCcC
Confidence            78999999999999999999999999988755            45679999999999999974 5654

>2lce_A B-cell lymphoma 6 protein; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}

Probab=99.02  E-value=1.2e-10  Score=88.82  Aligned_cols=56  Identities=25%  Similarity=0.319  Sum_probs=51.0

Q ss_pred             ccccccccccCccCCchhhHhhhhhhccCcccccCCCCCCCCccceeecCCCCCCHhHHHHHhhhccC
Q 015460           33 AKHFKCHVCHKKLSTAGGMAIHVLQVHKENVTKVPNAKPGRESTDIEIYGMQGIPPDVLAAHYGEEEE  100 (406)
Q Consensus        33 EKPfkC~~CgksFss~s~LkrH~rthHgek~~~Cp~~~~~r~s~~c~iCG~~fi~~~~L~~H~k~he~  100 (406)
                      +++|+|.+|++.|.++..|++|++.|++++.            |.|.+|++.|.....|.+|++.|.+
T Consensus        15 ~~~~~C~~C~k~f~~~~~l~~H~~~H~~~~~------------~~C~~C~k~f~~~~~L~~H~~~H~~   70 (74)
T 2lce_A           15 DKPYKCDRCQASFRYKGNLASHKTVHTGEKP------------YRCNICGAQFNRPANLKTHTRIHSG   70 (74)
T ss_dssp             CCSBCCTTSSCCBSCHHHHHHHHHHHCCCCS------------EECTTTCCEESCHHHHHHHHHHHCC
T ss_pred             CCCeECCCCCceeCCHHHHHHHHHHcCCCCC------------EECCCCCchhCCHHHHHHHHHhcCC
Confidence            8999999999999999999999999988765            5556799999999999999999875

>3uk3_C Zinc finger protein 217; transcription factor, DNA binding, DNA-metal BI protein complex; 2.10A {Homo sapiens}

Probab=99.01  E-value=1.2e-10  Score=83.96  Aligned_cols=55  Identities=16%  Similarity=0.192  Sum_probs=47.2

Q ss_pred             ccccccccccCccCCchhhHhhhhhhccCcccccCCCCCCCCccceeecCCCCCCHhHHHHHhhhcc
Q 015460           33 AKHFKCHVCHKKLSTAGGMAIHVLQVHKENVTKVPNAKPGRESTDIEIYGMQGIPPDVLAAHYGEEE   99 (406)
Q Consensus        33 EKPfkC~~CgksFss~s~LkrH~rthHgek~~~Cp~~~~~r~s~~c~iCG~~fi~~~~L~~H~k~he   99 (406)
                      +++|+|.+|++.|.+...|++|+++|+++++            +.|.+|++.|.....|..|++.|.
T Consensus         2 ~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~------------~~C~~C~~~f~~~~~l~~H~~~hh   56 (57)
T 3uk3_C            2 SSSRECSYCGKFFRSNYYLNIHLRTHTGEKP------------YKCEFCEYAAAQKTSLRYHLERHH   56 (57)
T ss_dssp             ---CBCTTTCCBCSCHHHHHHHHHHHHCCCC------------EECSSSSCEESSHHHHHHHHHHHC
T ss_pred             CCCccCCCCcchhCChHHHHHHHHHcCCCCC------------cCCCCCcchhCCHHHHHHHHHHhc
Confidence            5899999999999999999999999988765            455679999999999999999875

>2ct1_A Transcriptional repressor CTCF; CCCTC-BINDING factor, zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.01  E-value=5.4e-11  Score=91.55  Aligned_cols=64  Identities=22%  Similarity=0.391  Sum_probs=52.6

Q ss_pred             HHHHhh----ccccccccccCccCCchhhHhhhhhhccCcccccCCCCCCCCccceeecCCCCCCHhHHHHHhhhccC
Q 015460           27 LVQHQK----AKHFKCHVCHKKLSTAGGMAIHVLQVHKENVTKVPNAKPGRESTDIEIYGMQGIPPDVLAAHYGEEEE  100 (406)
Q Consensus        27 Lk~H~R----EKPfkC~~CgksFss~s~LkrH~rthHgek~~~Cp~~~~~r~s~~c~iCG~~fi~~~~L~~H~k~he~  100 (406)
                      |.+|++    +|+|+|.+|++.|.++.+|++|++.+|.++          ...|.|.+|++.|.....|.+|++.|..
T Consensus         3 ~~~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~~h~~~----------~~~~~C~~C~~~f~~~~~L~~H~~~~H~   70 (77)
T 2ct1_A            3 SGSSGRTHSGEKPYECYICHARFTQSGTMKMHILQKHTEN----------VAKFHCPHCDTVIARKSDLGVHLRKQHS   70 (77)
T ss_dssp             CCCCCCCCSCCCSEECTTTCCEESCHHHHHHHHHHHSSSS----------CSSEECSSSSCEESSHHHHHHHHHHTSC
T ss_pred             CCccccccCCCCCeECCCcCchhCCHHHHHHHHHHhcCCC----------CCccCCCCCCCccCCHHHHHHHHHHhCC
Confidence            345665    899999999999999999999998655432          1356778899999999999999997654

>1wjp_A Zinc finger protein 295; ZF-C2H2 domain, zinc binding, nucleic acid binding, KIAA1227 protein, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.01  E-value=2.1e-10  Score=93.48  Aligned_cols=58  Identities=17%  Similarity=0.401  Sum_probs=52.2

Q ss_pred             ccc-cCccCcccCChHHHHHHhh---ccccccccccCccCCchhhHhhhh-hhccCcccccCC
Q 015460           11 KVW-CYYCDREFDDEKILVQHQK---AKHFKCHVCHKKLSTAGGMAIHVL-QVHKENVTKVPN   68 (406)
Q Consensus        11 Kp~-C~~CgK~Fs~ks~Lk~H~R---EKPfkC~~CgksFss~s~LkrH~r-thHgek~~~Cp~   68 (406)
                      +.+ |.+|++.|.....|++|++   +++|+|.+|++.|.++.+|++|++ .|.+++.|.|..
T Consensus        41 ~~~~C~~C~~~f~~~~~l~~H~~H~~~~~~~C~~C~~~f~~~~~L~~H~~~~H~~~~~~~~~~  103 (107)
T 1wjp_A           41 NAAVCPYCSLRFFSPELKQEHESKCEYKKLTCLECMRTFKSSFSIWRHQVEVHNQNNMAPTSG  103 (107)
T ss_dssp             HSBCCTTTCCCBSSHHHHHHHHHHCSTGGGEEGGGTEECSSHHHHHHHHHHTSCCCCCCCCCC
T ss_pred             CCccCCCCCCccCCHHHHHHHHHcCCCCCccCccccchhCCHHHHHHHHHHHcCCCCCCCCCC
Confidence            466 9999999999999999998   899999999999999999999997 677778777653

>1x5w_A Zinc finger protein 64, isoforms 1; ZNF338, nuclear protein, DNA binding, transcription, C2H2 type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.00  E-value=1.4e-10  Score=87.52  Aligned_cols=56  Identities=16%  Similarity=0.202  Sum_probs=50.7

Q ss_pred             ccccccccccCccCCchhhHhhhhhhccCcccccCCCCCCCCccceeecCCCCCCHhHHHHHhhhccC
Q 015460           33 AKHFKCHVCHKKLSTAGGMAIHVLQVHKENVTKVPNAKPGRESTDIEIYGMQGIPPDVLAAHYGEEEE  100 (406)
Q Consensus        33 EKPfkC~~CgksFss~s~LkrH~rthHgek~~~Cp~~~~~r~s~~c~iCG~~fi~~~~L~~H~k~he~  100 (406)
                      +++|+|.+|++.|.+...|++|+++|++++.            |.|.+|++.|.....|..|++.|.+
T Consensus         7 ~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~------------~~C~~C~~~f~~~~~L~~H~~~h~~   62 (70)
T 1x5w_A            7 GHPEKCSECSYSCSSKAALRIHERIHCTDRP------------FKCNYCSFDTKQPSNLSKHMKKFHG   62 (70)
T ss_dssp             CCSEECSSSSCEESSHHHHHHHHGGGCCSCS------------EECSSSSCEESSHHHHHHHHHHHHS
T ss_pred             CCCeECCCCCcccCCHHHHHHHHHHcCCCCC------------EeCCCCCCccCCHHHHHHHHHHHhC
Confidence            7899999999999999999999999888764            5567799999999999999998875

>1x6h_A Transcriptional repressor CTCF; zinc finger protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.00  E-value=1.6e-10  Score=89.64  Aligned_cols=66  Identities=15%  Similarity=0.187  Sum_probs=55.9

Q ss_pred             HHHHhh----ccccccccccCccCCchhhHhhhhhhccCcccccCCCCCCCCccceeecCCCCCCHhHHHHHhhhccC
Q 015460           27 LVQHQK----AKHFKCHVCHKKLSTAGGMAIHVLQVHKENVTKVPNAKPGRESTDIEIYGMQGIPPDVLAAHYGEEEE  100 (406)
Q Consensus        27 Lk~H~R----EKPfkC~~CgksFss~s~LkrH~rthHgek~~~Cp~~~~~r~s~~c~iCG~~fi~~~~L~~H~k~he~  100 (406)
                      |++|++    +|+|+|.+|++.|.+...|++|++.||+++.        ....|.|.+|++.|.....|..|++.|..
T Consensus         3 ~~~H~~~H~~~k~~~C~~C~~~f~~~~~l~~H~~~~~~~~~--------~~~~~~C~~C~~~f~~~~~L~~H~~~h~~   72 (86)
T 1x6h_A            3 SGSSGRTHTGEKPYACSHCDKTFRQKQLLDMHFKRYHDPNF--------VPAAFVCSKCGKTFTRRNTMARHADNCAG   72 (86)
T ss_dssp             TTCCSTTCCCCCCEECSSSSCEESSHHHHHHHHHHTTCSSC--------CCCCEECSSSCCEESCHHHHHHHHHHCCC
T ss_pred             cccccceecCCCCCcCCCCCCccCCHHHHHHHHHHhcCCcC--------CCcceECCCCCChhCCHHHHHHHHHHccC
Confidence            455666    8999999999999999999999998887530        12457788999999999999999999876

>2rpc_A Zinc finger protein ZIC 3; ZF-C2H2, zinc finger protein of the cerebellum 3, disease mutation, DNA-binding, metal-binding, nucleus, polymorphism; NMR {Homo sapiens}

Probab=98.99  E-value=2.6e-10  Score=98.43  Aligned_cols=56  Identities=25%  Similarity=0.360  Sum_probs=52.5

Q ss_pred             c-cCccCcccCChHHHHHHhh----cccccccc--ccCccCCchhhHhhhhhhccCcccccCC
Q 015460           13 W-CYYCDREFDDEKILVQHQK----AKHFKCHV--CHKKLSTAGGMAIHVLQVHKENVTKVPN   68 (406)
Q Consensus        13 ~-C~~CgK~Fs~ks~Lk~H~R----EKPfkC~~--CgksFss~s~LkrH~rthHgek~~~Cp~   68 (406)
                      + |.+|++.|.....|.+|++    +++|+|.+  |++.|.+...|++|+++|+++++|.|..
T Consensus        63 ~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~  125 (155)
T 2rpc_A           63 EECPREGKSFKAKYKLVNHIRVHTGEKPFPCPFPGCGKIFARSENLKIHKRTHTGEKPFKCEF  125 (155)
T ss_dssp             TTCTTSSCCCSSHHHHHHHTHHHHCCCSEECSCTTTCCEESCHHHHHHHHTTTCSSCSBCCSS
T ss_pred             cCCCCcccccCCHHHHHHHHHhcCCCCcccCCcCCCCCccCCHHHHHHHHHhhCCCCCccCCC
Confidence            5 9999999999999999988    79999998  9999999999999999999999999985

>2cot_A Zinc finger protein 435; ADK_LID domain, zinc finger and SCAN domain containing protein 16, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=98.97  E-value=3.7e-10  Score=86.81  Aligned_cols=56  Identities=20%  Similarity=0.269  Sum_probs=51.0

Q ss_pred             ccccccccccCccCCchhhHhhhhhhccCcccccCCCCCCCCccceeecCCCCCCHhHHHHHhhhccC
Q 015460           33 AKHFKCHVCHKKLSTAGGMAIHVLQVHKENVTKVPNAKPGRESTDIEIYGMQGIPPDVLAAHYGEEEE  100 (406)
Q Consensus        33 EKPfkC~~CgksFss~s~LkrH~rthHgek~~~Cp~~~~~r~s~~c~iCG~~fi~~~~L~~H~k~he~  100 (406)
                      +++|+|.+|++.|.+...|++|+++|+++++            |.|.+|++.|.....|.+|++.|.+
T Consensus        16 ~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~------------~~C~~C~~~f~~~~~L~~H~~~H~~   71 (77)
T 2cot_A           16 RRRYKCDECGKSFSHSSDLSKHRRTHTGEKP------------YKCDECGKAFIQRSHLIGHHRVHTG   71 (77)
T ss_dssp             SCSSBCSSSCCBCSCHHHHHHHHTTTCCSCS------------EECSSSCCEESSHHHHHHHGGGSCC
T ss_pred             CCCEECCCCCcccCCHHHHHHHHHHcCCCcC------------eeCCCCCCccCCHHHHHHHHHHhCC
Confidence            8999999999999999999999999988764            5567799999999999999999876

>2d9h_A Zinc finger protein 692; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.95  E-value=3.6e-10  Score=86.91  Aligned_cols=59  Identities=17%  Similarity=0.247  Sum_probs=49.5

Q ss_pred             ccccccccccCccCCchhhHhhhhhhccCcccccCCCCCCCCccceeecCCCCCCHhHHHHHhhh-ccC
Q 015460           33 AKHFKCHVCHKKLSTAGGMAIHVLQVHKENVTKVPNAKPGRESTDIEIYGMQGIPPDVLAAHYGE-EEE  100 (406)
Q Consensus        33 EKPfkC~~CgksFss~s~LkrH~rthHgek~~~Cp~~~~~r~s~~c~iCG~~fi~~~~L~~H~k~-he~  100 (406)
                      +|+|+|.+|++.|.++..|++|+++|+++.         ..+.|.|.+|++.|.....|..|++. |.+
T Consensus         5 ~k~~~C~~C~k~f~~~~~L~~H~~~h~~~~---------~~~~~~C~~C~k~f~~~~~L~~H~~~~H~~   64 (78)
T 2d9h_A            5 SSGLQCEICGFTCRQKASLNWHQRKHAETV---------AALRFPCEFCGKRFEKPDSVAAHRSKSHPA   64 (78)
T ss_dssp             CCCEECSSSCCEESSHHHHHHHHHHHHHHT---------TTCCEECTTTCCEESSHHHHHHHHHHTSTT
T ss_pred             CcCeECCCCCCeeCCHHHHHHHHHHhhccC---------CCcccCCCCCCchhCCHHHHHHHHHHhCCC
Confidence            799999999999999999999999998631         11356677899999999999999954 544

>2epa_A Krueppel-like factor 10; transforming growth factor-beta-inducible early growth response protein 1, TGFB-inducible early growth response protein 1; NMR {Homo sapiens}

Probab=98.95  E-value=4.9e-10  Score=84.87  Aligned_cols=52  Identities=17%  Similarity=0.444  Sum_probs=42.5

Q ss_pred             CCCCccc-cCc--cCcccCChHHHHHHhh----cccccccc--ccCccCCchhhHhhhhhh
Q 015460            7 RVSSKVW-CYY--CDREFDDEKILVQHQK----AKHFKCHV--CHKKLSTAGGMAIHVLQV   58 (406)
Q Consensus         7 r~gEKp~-C~~--CgK~Fs~ks~Lk~H~R----EKPfkC~~--CgksFss~s~LkrH~rth   58 (406)
                      ...++.+ |.+  |+|.|.....|++|++    +++|+|.+  |++.|.++..|++|+++|
T Consensus        12 ~~~~~~~~C~~~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~~~C~k~f~~~~~l~~H~~~H   72 (72)
T 2epa_A           12 SSRIRSHICSHPGCGKTYFKSSHLKAHTRTHTGEKPFSCSWKGCERRFARSDELSRHRRTH   72 (72)
T ss_dssp             CCCCCCEECSSTTTCCEESSHHHHHHHHHHHSSSCSEECCCTTCCCEESSHHHHHHHTTTC
T ss_pred             ccccCceeCCCCCCccccCCHHHHHHHHHhcCCCCCccCCCCCCCcccCCHHHHHhHhhcC
Confidence            3355666 888  9999999999999987    78899965  999999999999998654

>1ubd_C Protein (YY1 zinc finger domain); transcription initiation, initiator element, zinc finger protein, DNA- protein recognition; HET: DNA; 2.50A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1znm_A*

Probab=98.94  E-value=4.6e-10  Score=93.12  Aligned_cols=59  Identities=27%  Similarity=0.491  Sum_probs=55.7

Q ss_pred             CCccc-cCccCcccCChHHHHHHhh----cccccccc--ccCccCCchhhHhhhhhhccCcccccC
Q 015460            9 SSKVW-CYYCDREFDDEKILVQHQK----AKHFKCHV--CHKKLSTAGGMAIHVLQVHKENVTKVP   67 (406)
Q Consensus         9 gEKp~-C~~CgK~Fs~ks~Lk~H~R----EKPfkC~~--CgksFss~s~LkrH~rthHgek~~~Cp   67 (406)
                      +++.+ |.+|++.|.....|.+|++    +++|+|.+  |++.|.+...|++|++.|++++.|.|+
T Consensus        31 ~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~   96 (124)
T 1ubd_C           31 GPRVHVCAECGKAFVESSKLKRHQLVHTGEKPFQCTFEGCGKRFSLDFNLRTHVRIHTGDRPYVCP   96 (124)
T ss_dssp             SCCCEECTTTCCEESSHHHHHHHGGGTSCCCCEECCSTTCCCEESCHHHHHHHHHHHHCCCCCCCC
T ss_pred             CCCCeECCCCCchhCCHHHHHHHHHHcCCCCCeeCCCCCCcCccCCHHHHHHHHHHhCCCCceECC
Confidence            67777 9999999999999999998    89999986  999999999999999999999999996

>2yt9_A Zinc finger-containing protein 1; C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=98.93  E-value=6.2e-10  Score=88.09  Aligned_cols=55  Identities=25%  Similarity=0.523  Sum_probs=48.7

Q ss_pred             CCCCccc-cCccCcccCChHHHHHHhh----c--cccccccccCccCCchhhHhhhhhhccC
Q 015460            7 RVSSKVW-CYYCDREFDDEKILVQHQK----A--KHFKCHVCHKKLSTAGGMAIHVLQVHKE   61 (406)
Q Consensus         7 r~gEKp~-C~~CgK~Fs~ks~Lk~H~R----E--KPfkC~~CgksFss~s~LkrH~rthHge   61 (406)
                      +.+++.| |.+|++.|.....|.+|++    +  ++|+|.+|++.|.++..|++|++..|..
T Consensus        30 h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~~C~~C~~~f~~~~~L~~H~~~~H~~   91 (95)
T 2yt9_A           30 HSGEKPYSCPVCGLRFKRKDRMSYHVRSHDGSVGKPYICQSCGKGFSRPDHLNGHIKQVHSG   91 (95)
T ss_dssp             SCSSCSEECSSSCCEESCHHHHHHHHHHHCCCCCSSBCCSSSCCCBSSHHHHHHHHHHTSCC
T ss_pred             cCCCCCCcCCCCCCccCCHHHHHHHHHHhcCCCCCceECCCccchhCCHHHHHHHHHHhcCC
Confidence            3467778 9999999999999999998    3  8999999999999999999999755543

>1bbo_A Human enhancer-binding protein MBP-1; DNA-binding protein; HET: ABA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 PDB: 3znf_A 4znf_A

Probab=98.93  E-value=5.2e-10  Score=80.62  Aligned_cols=54  Identities=9%  Similarity=0.140  Sum_probs=48.5

Q ss_pred             ccccccccCccCCchhhHhhhhhhccCcccccCCCCCCCCccceeecCCCCCCHhHHHHHhhhccC
Q 015460           35 HFKCHVCHKKLSTAGGMAIHVLQVHKENVTKVPNAKPGRESTDIEIYGMQGIPPDVLAAHYGEEEE  100 (406)
Q Consensus        35 PfkC~~CgksFss~s~LkrH~rthHgek~~~Cp~~~~~r~s~~c~iCG~~fi~~~~L~~H~k~he~  100 (406)
                      +|+|.+|++.|.+...|.+|+++|+++++            +.|.+||+.|.....|..|++.|..
T Consensus         1 p~~C~~C~~~f~~~~~l~~H~~~h~~~~~------------~~C~~C~~~f~~~~~l~~H~~~h~~   54 (57)
T 1bbo_A            1 KYICEECGIRXKKPSMLKKHIRTHTDVRP------------YHCTYCNFSFKTKGNLTKHMKSKAH   54 (57)
T ss_dssp             CCBCTTTCCBCSSHHHHHHHHHHTSSCCC------------EECSSSSCEESSHHHHHHHHHSSSS
T ss_pred             CCcCCCCcCcCCCHHHHHHHHHhcCCCCC------------ccCCCCCchhcCHHHHHHHHHHhcc
Confidence            68999999999999999999999988764            5567799999999999999998865

>2drp_A Protein (tramtrack DNA-binding domain); protein-DNA complex, double helix, transcription/DNA complex; HET: DNA; 2.80A {Drosophila melanogaster} SCOP: g.37.1.1 g.37.1.1

Probab=98.91  E-value=4.3e-10  Score=83.60  Aligned_cols=56  Identities=14%  Similarity=0.237  Sum_probs=48.8

Q ss_pred             ccccccccccCccCCchhhHhhhhhhc--cCcccccCCCCCCCCccceeecCCCCCCHhHHHHHhhhccC
Q 015460           33 AKHFKCHVCHKKLSTAGGMAIHVLQVH--KENVTKVPNAKPGRESTDIEIYGMQGIPPDVLAAHYGEEEE  100 (406)
Q Consensus        33 EKPfkC~~CgksFss~s~LkrH~rthH--gek~~~Cp~~~~~r~s~~c~iCG~~fi~~~~L~~H~k~he~  100 (406)
                      +|+|+|.+|++.|.+..+|++|++++|  +++            .|.|.+||+.|.....|..|++.|.+
T Consensus         8 ~k~~~C~~C~k~f~~~~~l~~H~~~~H~~~~~------------~~~C~~C~k~f~~~~~L~~H~~~~H~   65 (66)
T 2drp_A            8 EHTYRCKVCSRVYTHISNFCRHYVTSHKRNVK------------VYPCPFCFKEFTRKDNMTAHVKIIHK   65 (66)
T ss_dssp             TTEEECTTTCCEESSHHHHHHHHHHHSSSSCC------------CEECTTTCCEESCHHHHHHHHHHHTC
T ss_pred             CcceECCCCcchhCCHHHHHHHHHHHcCCCCc------------CeECCCCCCccCCHHHHHHHHHHHcC
Confidence            899999999999999999999999855  444            46677899999999999999988753

>2adr_A ADR1; transcription regulation, zinc finger,; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 g.37.1.1

Probab=98.89  E-value=1e-09  Score=79.96  Aligned_cols=55  Identities=16%  Similarity=0.236  Sum_probs=48.2

Q ss_pred             cccccccccCccCCchhhHhhhhhhccCcccccCCCCCCCCccceeecCCCCCCHhHHHHHh-hhccC
Q 015460           34 KHFKCHVCHKKLSTAGGMAIHVLQVHKENVTKVPNAKPGRESTDIEIYGMQGIPPDVLAAHY-GEEEE  100 (406)
Q Consensus        34 KPfkC~~CgksFss~s~LkrH~rthHgek~~~Cp~~~~~r~s~~c~iCG~~fi~~~~L~~H~-k~he~  100 (406)
                      |+|+|.+|++.|.+...|++|+++|+++++            +.|.+|++.|.....|..|+ +.|.+
T Consensus         1 k~~~C~~C~~~f~~~~~l~~H~~~h~~~~~------------~~C~~C~~~f~~~~~l~~H~~~~H~~   56 (60)
T 2adr_A            1 RSFVCEVCTRAFARQEHLKRHYRSHTNEKP------------YPCGLCNRAFTRRDLLIRHAQKIHSG   56 (60)
T ss_dssp             CCBCCTTTCCCBSCHHHHHHHHHTTTSSCS------------EECTTTCCEESSHHHHHHHHTTTSCC
T ss_pred             CcCcCCCCccccCCHHHHHHHHHHhCCCCC------------ccCCCCCCccCCHHHHHHHHHHHcCC
Confidence            689999999999999999999999988765            45567999999999999997 56764

>2csh_A Zinc finger protein 297B; ZF-C2H2 domain, zinc finger and BTB domain containing protein 22B, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=98.89  E-value=4.3e-10  Score=91.75  Aligned_cols=54  Identities=26%  Similarity=0.572  Sum_probs=50.1

Q ss_pred             CCCccc-cCccCcccCChHHHHHHhh----ccccccccccCccCCchhhHhhhhhhccC
Q 015460            8 VSSKVW-CYYCDREFDDEKILVQHQK----AKHFKCHVCHKKLSTAGGMAIHVLQVHKE   61 (406)
Q Consensus         8 ~gEKp~-C~~CgK~Fs~ks~Lk~H~R----EKPfkC~~CgksFss~s~LkrH~rthHge   61 (406)
                      .+++.+ |.+|++.|.....|++|++    +++|+|.+|++.|.++..|++|+++|++.
T Consensus        33 ~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~   91 (110)
T 2csh_A           33 LGLRPYGCGVCGKKFKMKHHLVGHMKIHTGIKPYECNICAKRFMWRDSFHRHVTSCTKS   91 (110)
T ss_dssp             SCCCSEECTTTSCEESSSHHHHHHHTTTCCCCCEECSSSCCEESCHHHHHHHHHHHHHH
T ss_pred             CCCcCccCCCCCcccCCHHHHHHHHHHcCCCCCeeCCCCcchhcCHHHHHHHHHHcccc
Confidence            466777 9999999999999999998    89999999999999999999999999865

>1f2i_G Fusion of N-terminal 17-MER peptide extension to ZIF12; zinc finger, dimer, protein-DNA complex, cooperativity, transcription/DNA complex; 2.35A {Mus musculus} SCOP: g.37.1.1 g.37.1.1

Probab=98.87  E-value=4.7e-10  Score=85.05  Aligned_cols=55  Identities=15%  Similarity=0.256  Sum_probs=49.1

Q ss_pred             ccccccc--cccCccCCchhhHhhhhhhccCcccccCCCCCCCCccceeecCCCCCCHhHHHHHhhhcc
Q 015460           33 AKHFKCH--VCHKKLSTAGGMAIHVLQVHKENVTKVPNAKPGRESTDIEIYGMQGIPPDVLAAHYGEEE   99 (406)
Q Consensus        33 EKPfkC~--~CgksFss~s~LkrH~rthHgek~~~Cp~~~~~r~s~~c~iCG~~fi~~~~L~~H~k~he   99 (406)
                      +++|+|.  .|++.|.++..|++|++.|+++++            |.|.+||+.|.....|.+|++.|.
T Consensus        17 ~~~~~C~~~~C~k~f~~~~~l~~H~~~h~~~~~------------~~C~~C~~~f~~~~~l~~H~~~Ht   73 (73)
T 1f2i_G           17 MRPYACPVESCDRRFSRSDELTRHIRIHTGQKP------------FQCRICMRNFSRSDHLTTHIRTHT   73 (73)
T ss_dssp             CCCEECSSTTBCCEESSHHHHHHHHHHHHCCCC------------EECTTTCCEESCHHHHHHHHTTCC
T ss_pred             CCccCCcCCCCCCccCCHHHHHHHHHhhCCCCC------------eECCCCCchhCCHHHHHHHHHhcC
Confidence            8999997  599999999999999999988765            455679999999999999999874

>2ebt_A Krueppel-like factor 5; C2H2-type zinc-finger, metal BIND, transcription factor, kruppel-like factor, GC-box promoter elements, structural genomics; NMR {Homo sapiens}

Probab=98.87  E-value=1.5e-09  Score=86.53  Aligned_cols=53  Identities=30%  Similarity=0.657  Sum_probs=48.4

Q ss_pred             CCCccc-cC--ccCcccCChHHHHHHhh----ccccccccccCccCCchhhHhhhhhhcc
Q 015460            8 VSSKVW-CY--YCDREFDDEKILVQHQK----AKHFKCHVCHKKLSTAGGMAIHVLQVHK   60 (406)
Q Consensus         8 ~gEKp~-C~--~CgK~Fs~ks~Lk~H~R----EKPfkC~~CgksFss~s~LkrH~rthHg   60 (406)
                      .+++.+ |.  .|++.|.....|.+|++    +++|+|.+|++.|.+...|++|+++|++
T Consensus        41 ~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~H~~  100 (100)
T 2ebt_A           41 TGEKPYKCTWEGCDWRFARSDELTRHYRKHTGAKPFQCGVCNRSFSRSDHLALHMKRHQN  100 (100)
T ss_dssp             SCCCCEECCSSSCCCEESSHHHHHHHHHHHTSCCSCBCSSSCCBCSSHHHHHHHHHHHCC
T ss_pred             CCCCCeeCCCCCCCCccCCHHHHHHHHHHhCCCCCeECCCCcCccCCHHHHHHHHHHhCC
Confidence            467778 96  69999999999999998    8999999999999999999999998864

>2wbs_A Krueppel-like factor 4; transcription-DNA complex, DNA-binding, transcription, metal-binding, DNA, protein, nucleus, activator; 1.70A {Mus musculus} PDB: 2wbu_A

Probab=98.81  E-value=2.8e-09  Score=83.12  Aligned_cols=52  Identities=23%  Similarity=0.583  Sum_probs=47.5

Q ss_pred             CCCCccc-cC--ccCcccCChHHHHHHhh----ccccccccccCccCCchhhHhhhhhh
Q 015460            7 RVSSKVW-CY--YCDREFDDEKILVQHQK----AKHFKCHVCHKKLSTAGGMAIHVLQV   58 (406)
Q Consensus         7 r~gEKp~-C~--~CgK~Fs~ks~Lk~H~R----EKPfkC~~CgksFss~s~LkrH~rth   58 (406)
                      +.+++.+ |.  .|++.|.....|.+|++    +++|+|.+|++.|.+...|.+|+++|
T Consensus        30 h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~H   88 (89)
T 2wbs_A           30 HTGEKPYHCDWDGCGWKFARSDELTRHYRKHTGHRPFQCQKCDRAFSRSDHLALHMKRH   88 (89)
T ss_dssp             SCSSCCEECCSTTTCCEESSHHHHHHHHHHHHCCCCEECSSSSCEESSHHHHHHHGGGG
T ss_pred             cCCCCCcCCCCCCCCCccCCHHHHHHHHHHcCCCCCccCCCCCcccCCHHHHHHHHHhh
Confidence            3467778 97  59999999999999988    89999999999999999999999877

>2eps_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.77  E-value=5e-09  Score=75.64  Aligned_cols=41  Identities=27%  Similarity=0.453  Sum_probs=29.7

Q ss_pred             CCCCccc-cCccCcccCChHHHHHHhh-----ccccccccccCccCC
Q 015460            7 RVSSKVW-CYYCDREFDDEKILVQHQK-----AKHFKCHVCHKKLST   47 (406)
Q Consensus         7 r~gEKp~-C~~CgK~Fs~ks~Lk~H~R-----EKPfkC~~CgksFss   47 (406)
                      ..++++| |.+|+|.|.+...|++|++     +|+|+|.+|++.|.+
T Consensus         7 ~~~~k~~~C~~C~k~f~~~~~L~~H~~~~H~~~k~~~C~~C~k~F~~   53 (54)
T 2eps_A            7 GSVGKPYICQSCGKGFSRPDHLNGHIKQVHTSERPHKCQVWVSGPSS   53 (54)
T ss_dssp             CCSSCCEECSSSCCEESSHHHHHHHHHHTSCCCCCCCSSSSCCSSCC
T ss_pred             CCCCCCeECCCCCcccCCHHHHHHHHHHhcCCCCCccCCCCCCCCCC
Confidence            4456666 7777777777777777753     677777777777765

>1llm_C Chimera of ZIF23-GCN4; dimerization, DNA recognition, leucine zipper, X-RAY crystallography, structure-based design, zinc fingers; 1.50A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 PDB: 1xf7_A

Probab=98.75  E-value=3.6e-09  Score=83.28  Aligned_cols=56  Identities=20%  Similarity=0.326  Sum_probs=50.1

Q ss_pred             ccccccccccCccCCchhhHhhhhhhccCcccccCCCCCCCCccceeecCCCCCCHhHHHHHhhhccC
Q 015460           33 AKHFKCHVCHKKLSTAGGMAIHVLQVHKENVTKVPNAKPGRESTDIEIYGMQGIPPDVLAAHYGEEEE  100 (406)
Q Consensus        33 EKPfkC~~CgksFss~s~LkrH~rthHgek~~~Cp~~~~~r~s~~c~iCG~~fi~~~~L~~H~k~he~  100 (406)
                      ||+|+|.+|++.|.+...|.+|+++|+++++            |.|.+||+.|.....|..|++.|.+
T Consensus         1 ek~~~C~~C~k~f~~~~~L~~H~~~H~~~~~------------~~C~~C~k~f~~~~~L~~H~~~h~~   56 (88)
T 1llm_C            1 MKPFQCRICMRNFSRSDHLTTHIRTHTGEKP------------FACDICGRKFARSDERKRHRDIQHI   56 (88)
T ss_dssp             CCCEECTTTCCEESCHHHHHHHHHHHHCCCC------------EECTTTCCEESSHHHHHHHHHHHTH
T ss_pred             CCCCcCCCCCCccCCHHHHHHHHHHcCCCCC------------ccCCCCCCccCCHHHHHHHHHHhCC
Confidence            6899999999999999999999999988765            4556799999999999999998764

>2dmi_A Teashirt homolog 3; zinc finger protein 537, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.74  E-value=2e-09  Score=88.38  Aligned_cols=52  Identities=12%  Similarity=0.283  Sum_probs=47.8

Q ss_pred             cc-cCccCccc--CChHHHHHHhh----ccccccccccCccCCchhhHhhhhhhccCcc
Q 015460           12 VW-CYYCDREF--DDEKILVQHQK----AKHFKCHVCHKKLSTAGGMAIHVLQVHKENV   63 (406)
Q Consensus        12 p~-C~~CgK~F--s~ks~Lk~H~R----EKPfkC~~CgksFss~s~LkrH~rthHgek~   63 (406)
                      .+ |.+|++.|  ..+..|++|++    +++|+|.+|++.|.++..|++|+++||..+.
T Consensus        50 ~~~C~~C~~~f~f~~~~~l~~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~hh~~~~  108 (115)
T 2dmi_A           50 HETDNNNPKRWSKPRKRSLLEMEGKEDAQKVLKCMYCGHSFESLQDLSVHMIKTKHYQK  108 (115)
T ss_dssp             CCCCCCCCSCCSSCCCCCCCCCCCSCCCCSSCBCSSSCCBCSSHHHHHHHHHHTTTTTC
T ss_pred             CccCCCCCcccccccHHHHHHHhhccCCCcceECCCCCCccCCHHHHHHHHHHhCCccc
Confidence            44 99999999  99999999988    8999999999999999999999999987653

>1yui_A GAGA-factor; complex (DNA-binding protein/DNA), chromatin remodeling, DNA binding protein/DNA complex; HET: DNA; NMR {Drosophila melanogaster} SCOP: g.37.1.1 PDB: 1yuj_A*

Probab=98.72  E-value=1.4e-09  Score=78.45  Aligned_cols=47  Identities=9%  Similarity=0.133  Sum_probs=41.6

Q ss_pred             CcccCChHHHHHHhh----ccccccccccCccCCchhhHhhhhhhccCccc
Q 015460           18 DREFDDEKILVQHQK----AKHFKCHVCHKKLSTAGGMAIHVLQVHKENVT   64 (406)
Q Consensus        18 gK~Fs~ks~Lk~H~R----EKPfkC~~CgksFss~s~LkrH~rthHgek~~   64 (406)
                      +|.|.+...|..|++    +++|+|.+|++.|.+.+.|.+|+++|+++++|
T Consensus         3 ~k~~~~~~~l~~h~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~kp~   53 (54)
T 1yui_A            3 AKRAKHPPGTEKPRSRSQSEQPATCPICYAVIRQSRNLRRHLELRHFAKPG   53 (54)
T ss_dssp             CCCCSCSSCCCCCHHHHTSSCCEECTTTCCEESSHHHHHHHHHHHTTTSCC
T ss_pred             ccccCCCcchhhHHHhcCCCCCccCCCCCcccCCHHHHHHHHHHhccCCCC
Confidence            567888888888877    89999999999999999999999999998865

>2ghf_A ZHX1, zinc fingers and homeoboxes protein 1; C2H2 zinc fingers, 4-stranded parallel/anti-parallel beta- sheet, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=98.71  E-value=3.8e-09  Score=87.88  Aligned_cols=59  Identities=14%  Similarity=0.076  Sum_probs=49.8

Q ss_pred             ccccccccccCccCCchhhHhhhhh-hccCcccccCCCCCCCCccceeecCCCCCCHhHHHHH-hhhccC
Q 015460           33 AKHFKCHVCHKKLSTAGGMAIHVLQ-VHKENVTKVPNAKPGRESTDIEIYGMQGIPPDVLAAH-YGEEEE  100 (406)
Q Consensus        33 EKPfkC~~CgksFss~s~LkrH~rt-hHgek~~~Cp~~~~~r~s~~c~iCG~~fi~~~~L~~H-~k~he~  100 (406)
                      ||+|+|.+|++.|.++..|++|++. |.+..         +.+.|.|++||+.|.....|..| ++.|.+
T Consensus        16 ekpy~C~~Cgk~F~~~~~L~~H~r~~H~~~~---------~ekpf~C~~Cgk~F~~~~~L~~H~~r~Htg   76 (102)
T 2ghf_A           16 EGGYECKYCTFQTPDLNMFTFHVDSEHPNVV---------LNSSYVCVECNFLTKRYDALSEHNLKYHPG   76 (102)
T ss_dssp             CSSEECSSCSCEESCHHHHHHHHHHHCSSCC---------CSCCEEETTTTEEESSTHHHHTHHHHTSTT
T ss_pred             CcCcCCCCCCCccCCHHHHHHHHHhhCCCCC---------CCCCcCCCCCCcccCCHHHHHHHHHHhcCC
Confidence            8999999999999999999999985 53211         12457788999999999999999 788876

>2eod_A TNF receptor-associated factor 4; zinc binding, NF-KB, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.70  E-value=3.3e-09  Score=79.49  Aligned_cols=54  Identities=15%  Similarity=0.237  Sum_probs=47.5

Q ss_pred             ccccccccccCccCCchhhHhhhhhhccCcccccCCCCCCCCcccee-ecCCCCCCHhHHHHHhhhccC
Q 015460           33 AKHFKCHVCHKKLSTAGGMAIHVLQVHKENVTKVPNAKPGRESTDIE-IYGMQGIPPDVLAAHYGEEEE  100 (406)
Q Consensus        33 EKPfkC~~CgksFss~s~LkrH~rthHgek~~~Cp~~~~~r~s~~c~-iCG~~fi~~~~L~~H~k~he~  100 (406)
                      +|+|+|.+|++.|. ..+|++|+++ +++++|.            |+ .||+.|.....|.+|++.|-.
T Consensus         8 ~~~~~C~~C~k~f~-~~~L~~H~~~-~~~~p~~------------C~~~C~k~f~~~~~L~~H~~~hc~   62 (66)
T 2eod_A            8 KRTQPCTYCTKEFV-FDTIQSHQYQ-CPRLPVA------------CPNQCGVGTVAREDLPGHLKDSCN   62 (66)
T ss_dssp             CCEEECSSSCCEEE-HHHHHHHHHH-CSSSEEE------------CTTCCSCCEEETTTHHHHHHTTSS
T ss_pred             CCCeeccccCCccC-HHHHHHHHHH-cCCcCcc------------CCcccCcccccHHHHHHHHHhhcc
Confidence            78999999999999 9999999988 7776554            55 799999999999999998754

>2emk_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ysv_A

Probab=98.68  E-value=5.6e-09  Score=72.38  Aligned_cols=36  Identities=19%  Similarity=0.314  Sum_probs=30.3

Q ss_pred             ccccccccccCccCCchhhHhhhhhhccCcccccCC
Q 015460           33 AKHFKCHVCHKKLSTAGGMAIHVLQVHKENVTKVPN   68 (406)
Q Consensus        33 EKPfkC~~CgksFss~s~LkrH~rthHgek~~~Cp~   68 (406)
                      +|+|+|.+|++.|.+++.|++|+++|+++++|+|..
T Consensus        10 ~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2emk_A           10 EKPYECKECGKAFSQTTHLIQHQRVHTGEKPSGPSS   45 (46)
T ss_dssp             SCSCBCSSSCCBCSCHHHHHHHHHHHSSCCCSSCCC
T ss_pred             CCceECCCCCchhCCHHHHHHHHHHcCCCCCCCCCC
Confidence            788888888888888888888888888888777764

>2em0_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens}

Probab=98.67  E-value=6.3e-09  Score=71.98  Aligned_cols=36  Identities=22%  Similarity=0.348  Sum_probs=30.0

Q ss_pred             ccccccccccCccCCchhhHhhhhhhccCcccccCC
Q 015460           33 AKHFKCHVCHKKLSTAGGMAIHVLQVHKENVTKVPN   68 (406)
Q Consensus        33 EKPfkC~~CgksFss~s~LkrH~rthHgek~~~Cp~   68 (406)
                      +|+|+|++|++.|.++.+|++|+++|+++++|+|..
T Consensus        10 ~k~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C~~   45 (46)
T 2em0_A           10 EKTWKCRECDMCFSQASSLRLHQNVHVGEKPSGPSS   45 (46)
T ss_dssp             CCCCCCSSSCCCCSSHHHHHHHGGGGSSSSCSCSSC
T ss_pred             CcCeECCCCCcccCCHHHHHHHHHHcCCCCCcCCCC
Confidence            788888888888888888888888888888777754

>2ytn_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.67  E-value=6.2e-09  Score=72.03  Aligned_cols=36  Identities=22%  Similarity=0.318  Sum_probs=29.9

Q ss_pred             ccccccccccCccCCchhhHhhhhhhccCcccccCC
Q 015460           33 AKHFKCHVCHKKLSTAGGMAIHVLQVHKENVTKVPN   68 (406)
Q Consensus        33 EKPfkC~~CgksFss~s~LkrH~rthHgek~~~Cp~   68 (406)
                      +++|+|.+|++.|.++.+|++|+++|+++++|.|..
T Consensus        10 ~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2ytn_A           10 KKPYKCNECGKVFTQNSHLARHRGIHTGEKPSGPSS   45 (46)
T ss_dssp             CSSCBCTTTCCBCSSHHHHHHHGGGTSCCCCCSCCC
T ss_pred             CcCeECCCCCCeeCCHHHHHHHhhhcCCCCCCCCCC
Confidence            788888888888888888888888888888777754

>2ep1_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.66  E-value=7.2e-09  Score=71.57  Aligned_cols=36  Identities=19%  Similarity=0.345  Sum_probs=33.3

Q ss_pred             ccccccccccCccCCchhhHhhhhhhccCcccccCC
Q 015460           33 AKHFKCHVCHKKLSTAGGMAIHVLQVHKENVTKVPN   68 (406)
Q Consensus        33 EKPfkC~~CgksFss~s~LkrH~rthHgek~~~Cp~   68 (406)
                      +++|+|.+|++.|.++.+|++|+++|+++++|.|..
T Consensus        10 ~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2ep1_A           10 EKPYECSDCGKSFIKKSQLHVHQRIHTGENPSGPSS   45 (46)
T ss_dssp             CCSSCCSSSCCCCSSHHHHHHHHGGGSSSCCCSSSC
T ss_pred             CCCcCCCCCCchhCCHHHHHHHHHHhCCCCCCCCCC
Confidence            889999999999999999999999999999998864

>2enf_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.66  E-value=6.5e-09  Score=71.93  Aligned_cols=36  Identities=19%  Similarity=0.301  Sum_probs=33.1

Q ss_pred             ccccccccccCccCCchhhHhhhhhhccCcccccCC
Q 015460           33 AKHFKCHVCHKKLSTAGGMAIHVLQVHKENVTKVPN   68 (406)
Q Consensus        33 EKPfkC~~CgksFss~s~LkrH~rthHgek~~~Cp~   68 (406)
                      +++|+|.+|++.|.++.+|++|+++|+++++|.|..
T Consensus        10 ~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2enf_A           10 EKPYKCNECGKVFTQNSHLVRHRGIHTGEKPSGPSS   45 (46)
T ss_dssp             CCSCBCSSSCCBCSSHHHHHHHHTTTTTSSCCCCSC
T ss_pred             CcCeECCCCCcccCCHHHHHHHHHhhCCCCCCCCCC
Confidence            889999999999999999999999999999998864

>2eq4_A Zinc finger protein 224; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.66  E-value=6.1e-09  Score=71.91  Aligned_cols=36  Identities=22%  Similarity=0.303  Sum_probs=29.6

Q ss_pred             ccccccccccCccCCchhhHhhhhhhccCcccccCC
Q 015460           33 AKHFKCHVCHKKLSTAGGMAIHVLQVHKENVTKVPN   68 (406)
Q Consensus        33 EKPfkC~~CgksFss~s~LkrH~rthHgek~~~Cp~   68 (406)
                      +|+|+|.+|++.|.++.+|++|+++|+++++|.|..
T Consensus        10 ~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~   45 (46)
T 2eq4_A           10 EKLYNCKECGKSFSRAPCLLKHERLHSGEKPSGPSS   45 (46)
T ss_dssp             CCCCCBTTTTBCCSCHHHHHHHHHHCCSSSCCCCCC
T ss_pred             CCCeECCCCCCccCchHHHHHHHHhcCCCCCCCCCC
Confidence            788888888888888888888888888888777754

>2epa_A Krueppel-like factor 10; transforming growth factor-beta-inducible early growth response protein 1, TGFB-inducible early growth response protein 1; NMR {Homo sapiens}

Probab=98.66  E-value=9e-09  Score=77.80  Aligned_cols=56  Identities=14%  Similarity=0.112  Sum_probs=48.9

Q ss_pred             cccccccc--ccCccCCchhhHhhhhhhccCcccccCCCCCCCCccceeecCCCCCCHhHHHHHhhhc
Q 015460           33 AKHFKCHV--CHKKLSTAGGMAIHVLQVHKENVTKVPNAKPGRESTDIEIYGMQGIPPDVLAAHYGEE   98 (406)
Q Consensus        33 EKPfkC~~--CgksFss~s~LkrH~rthHgek~~~Cp~~~~~r~s~~c~iCG~~fi~~~~L~~H~k~h   98 (406)
                      +++|.|.+  |++.|.+...|++|+++|+++++|+|..          +.|++.|.....|.+|++.|
T Consensus        15 ~~~~~C~~~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~----------~~C~k~f~~~~~l~~H~~~H   72 (72)
T 2epa_A           15 IRSHICSHPGCGKTYFKSSHLKAHTRTHTGEKPFSCSW----------KGCERRFARSDELSRHRRTH   72 (72)
T ss_dssp             CCCEECSSTTTCCEESSHHHHHHHHHHHSSSCSEECCC----------TTCCCEESSHHHHHHHTTTC
T ss_pred             cCceeCCCCCCccccCCHHHHHHHHHhcCCCCCccCCC----------CCCCcccCCHHHHHhHhhcC
Confidence            78999999  9999999999999999999887665531          24999999999999999876

>2eop_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.66  E-value=6.6e-09  Score=71.77  Aligned_cols=36  Identities=22%  Similarity=0.330  Sum_probs=29.8

Q ss_pred             ccccccccccCccCCchhhHhhhhhhccCcccccCC
Q 015460           33 AKHFKCHVCHKKLSTAGGMAIHVLQVHKENVTKVPN   68 (406)
Q Consensus        33 EKPfkC~~CgksFss~s~LkrH~rthHgek~~~Cp~   68 (406)
                      +++|+|.+|++.|.++.+|++|+++|+++++|.|..
T Consensus        10 ~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2eop_A           10 EKPHECRECGKSFSFNSQLIVHQRIHTGENPSGPSS   45 (46)
T ss_dssp             CCSCBCTTTCCBCSSHHHHHHHHTTTTTSCCSCCCC
T ss_pred             CCCeeCCCCCchhCCHHHHHHHHHHcCCCCCCCCCC
Confidence            788888888888888888888888888888777754

>2yth_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.66  E-value=7.6e-09  Score=71.70  Aligned_cols=36  Identities=19%  Similarity=0.361  Sum_probs=33.2

Q ss_pred             ccccccccccCccCCchhhHhhhhhhccCcccccCC
Q 015460           33 AKHFKCHVCHKKLSTAGGMAIHVLQVHKENVTKVPN   68 (406)
Q Consensus        33 EKPfkC~~CgksFss~s~LkrH~rthHgek~~~Cp~   68 (406)
                      +++|+|.+|++.|.++.+|++|+++|+++++|.|..
T Consensus        10 ~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2yth_A           10 EKPFQCEECGKRFTQNSHLHSHQRVHTGEKPSGPSS   45 (46)
T ss_dssp             SSSBCCSSSCCCBSSHHHHHHHGGGGTTCCCSSCCC
T ss_pred             CcCCCCCCCCcccCCHHHHHHHHHhcCCCCCCCCCC
Confidence            889999999999999999999999999999998864

>2emf_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.66  E-value=7.7e-09  Score=71.66  Aligned_cols=36  Identities=22%  Similarity=0.448  Sum_probs=30.9

Q ss_pred             ccccccccccCccCCchhhHhhhhhhccCcccccCC
Q 015460           33 AKHFKCHVCHKKLSTAGGMAIHVLQVHKENVTKVPN   68 (406)
Q Consensus        33 EKPfkC~~CgksFss~s~LkrH~rthHgek~~~Cp~   68 (406)
                      +|+|+|.+|++.|.++.+|++|+++|+++++|+|..
T Consensus        10 ~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2emf_A           10 GKHFECTECGKAFTRKSTLSMHQKIHTGEKPSGPSS   45 (46)
T ss_dssp             SCCEECSSSCCEESCHHHHHHHGGGTSCSSCSCCCC
T ss_pred             CCCeECCCCCchhCCHHHHHHHHHHhCCCCCCCCCC
Confidence            788999999999999999999988888888877764

>2eoh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.65  E-value=8.6e-09  Score=71.43  Aligned_cols=36  Identities=19%  Similarity=0.361  Sum_probs=33.4

Q ss_pred             ccccccccccCccCCchhhHhhhhhhccCcccccCC
Q 015460           33 AKHFKCHVCHKKLSTAGGMAIHVLQVHKENVTKVPN   68 (406)
Q Consensus        33 EKPfkC~~CgksFss~s~LkrH~rthHgek~~~Cp~   68 (406)
                      +|+|+|.+|++.|.++.+|++|+++|+++++|+|+.
T Consensus        10 ~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2eoh_A           10 KKPYECKECRKTFIQIGHLNQHKRVHTGERSSGPSS   45 (46)
T ss_dssp             SCSCCCSSSCCCCSSHHHHHHHHHHCSSCCSCSTTC
T ss_pred             CCCcCCCCcCchhCCHHHHHHHHHHhCCCCCCCCCC
Confidence            899999999999999999999999999999999864

>2ely_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ena_A 2en4_A

Probab=98.65  E-value=1e-08  Score=71.10  Aligned_cols=36  Identities=25%  Similarity=0.385  Sum_probs=30.8

Q ss_pred             ccccccccccCccCCchhhHhhhhhhccCcccccCC
Q 015460           33 AKHFKCHVCHKKLSTAGGMAIHVLQVHKENVTKVPN   68 (406)
Q Consensus        33 EKPfkC~~CgksFss~s~LkrH~rthHgek~~~Cp~   68 (406)
                      +|+|+|.+|++.|.++..|++|+++|+++++|+|..
T Consensus        10 ~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2ely_A           10 EKPFKCVECGKGFSRRSALNVHHKLHTGEKPSGPSS   45 (46)
T ss_dssp             CCSBCCSSSCCCBSSTTHHHHHHHHHSCCSSCSCCC
T ss_pred             CCCcccCccCcccCCHHHHHHHHHHcCCCCCCCCCC
Confidence            788889899999999899999988888888877764

>2epz_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.65  E-value=9.1e-09  Score=71.17  Aligned_cols=36  Identities=25%  Similarity=0.316  Sum_probs=29.7

Q ss_pred             ccccccccccCccCCchhhHhhhhhhccCcccccCC
Q 015460           33 AKHFKCHVCHKKLSTAGGMAIHVLQVHKENVTKVPN   68 (406)
Q Consensus        33 EKPfkC~~CgksFss~s~LkrH~rthHgek~~~Cp~   68 (406)
                      +|+|+|.+|++.|.++.+|++|+++|+++++|+|..
T Consensus        10 ~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2epz_A           10 EKPFDCIDCGKAFSDHIGLNQHRRIHTGEKPSGPSS   45 (46)
T ss_dssp             CCSBCCTTTCCCBSSHHHHHHHHTTTTTCCCCSSCC
T ss_pred             CCCeECCCCCceeCCHHHHHHHHHHhCCCCCCCCCC
Confidence            788888888888888888888888888888777754

>2ema_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2emc_A

Probab=98.65  E-value=6.1e-09  Score=72.07  Aligned_cols=36  Identities=22%  Similarity=0.364  Sum_probs=30.5

Q ss_pred             ccccccccccCccCCchhhHhhhhhhccCcccccCC
Q 015460           33 AKHFKCHVCHKKLSTAGGMAIHVLQVHKENVTKVPN   68 (406)
Q Consensus        33 EKPfkC~~CgksFss~s~LkrH~rthHgek~~~Cp~   68 (406)
                      +|+|+|.+|++.|.++.+|++|+++|+++++|+|..
T Consensus        10 ~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2ema_A           10 EKRYKCNECGKVFSRNSQLSQHQKIHTGEKPSGPSS   45 (46)
T ss_dssp             SCCEECSSSCCEESSHHHHHHHHTGGGCCCCCSSSC
T ss_pred             CcCcCCCCCcchhCCHHHHHHHHHhcCCCCCCCCCC
Confidence            788888888888888888888888888888877764

>2eq2_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.65  E-value=7.8e-09  Score=71.51  Aligned_cols=36  Identities=22%  Similarity=0.369  Sum_probs=33.2

Q ss_pred             ccccccccccCccCCchhhHhhhhhhccCcccccCC
Q 015460           33 AKHFKCHVCHKKLSTAGGMAIHVLQVHKENVTKVPN   68 (406)
Q Consensus        33 EKPfkC~~CgksFss~s~LkrH~rthHgek~~~Cp~   68 (406)
                      +++|+|.+|++.|.++.+|++|+++|+++++|.|..
T Consensus        10 ~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2eq2_A           10 GKPYQCNECGKAFSQTSKLARHQRVHTGEKPSGPSS   45 (46)
T ss_dssp             SCSSSCCSSCCCCSSHHHHHHHGGGGCCCCCCCCCC
T ss_pred             CCCeECCCCCcccCCHHHHHHHHHHcCCCCCCCCCC
Confidence            889999999999999999999999999999998864

>2ep3_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.65  E-value=5.6e-09  Score=72.28  Aligned_cols=36  Identities=17%  Similarity=0.324  Sum_probs=31.3

Q ss_pred             ccccccccccCccCCchhhHhhhhhhccCcccccCC
Q 015460           33 AKHFKCHVCHKKLSTAGGMAIHVLQVHKENVTKVPN   68 (406)
Q Consensus        33 EKPfkC~~CgksFss~s~LkrH~rthHgek~~~Cp~   68 (406)
                      +|+|+|.+|++.|.++.+|++|+++|+++++|+|..
T Consensus        10 ~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~   45 (46)
T 2ep3_A           10 EKPYRCAECGKAFTDRSNLFTHQKIHTGEKPSGPSS   45 (46)
T ss_dssp             CCSEECSSSCCEESSHHHHHHHHTTTTTSCCCCTTC
T ss_pred             CCCeECCCCCchhCCHHHHHHHHHHcCCCCCCCCCC
Confidence            788999999999999999999988888888888864

>2el5_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eol_A 2emv_A 2eqw_A 2en0_A 2epy_A

Probab=98.65  E-value=7.3e-09  Score=70.16  Aligned_cols=35  Identities=14%  Similarity=0.260  Sum_probs=32.2

Q ss_pred             ccccccccccCccCCchhhHhhhhhhccCcccccC
Q 015460           33 AKHFKCHVCHKKLSTAGGMAIHVLQVHKENVTKVP   67 (406)
Q Consensus        33 EKPfkC~~CgksFss~s~LkrH~rthHgek~~~Cp   67 (406)
                      +|+|+|.+|++.|.++++|++|+++|+++++|.|+
T Consensus         8 ~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   42 (42)
T 2el5_A            8 ENPYECSECGKAFNRKDQLISHQRTHAGESGPSSG   42 (42)
T ss_dssp             CCSEECSSSCCEESSHHHHHHHHGGGCCCCSCCCC
T ss_pred             CCCccCCCcChhhCCHHHHHHHHHhcCCCCCCCCC
Confidence            88999999999999999999999999999988884

>2el4_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eog_A 2em1_A 2emw_A 2eok_A

Probab=98.65  E-value=6e-09  Score=71.96  Aligned_cols=36  Identities=17%  Similarity=0.308  Sum_probs=29.6

Q ss_pred             ccccccccccCccCCchhhHhhhhhhccCcccccCC
Q 015460           33 AKHFKCHVCHKKLSTAGGMAIHVLQVHKENVTKVPN   68 (406)
Q Consensus        33 EKPfkC~~CgksFss~s~LkrH~rthHgek~~~Cp~   68 (406)
                      +|+|+|.+|++.|.+++.|++|+++|+++++|.|..
T Consensus        10 ~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2el4_A           10 VKPYGCSQCAKTFSLKSQLIVHQRSHTGVKPSGPSS   45 (46)
T ss_dssp             CCSEECSSSSCEESSHHHHHHHGGGSSSCCCSCCTT
T ss_pred             CCceECCCCCchhCCHHHHHHHHHHhCCCCCCCCCC
Confidence            788888888888888888888888888888777754

>2elz_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.65  E-value=1.1e-08  Score=70.84  Aligned_cols=36  Identities=19%  Similarity=0.311  Sum_probs=28.8

Q ss_pred             ccccccccccCccCCchhhHhhhhhhccCcccccCC
Q 015460           33 AKHFKCHVCHKKLSTAGGMAIHVLQVHKENVTKVPN   68 (406)
Q Consensus        33 EKPfkC~~CgksFss~s~LkrH~rthHgek~~~Cp~   68 (406)
                      +|+|+|.+|++.|.++.+|++|+++|+++++|+|..
T Consensus        10 ~k~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C~~   45 (46)
T 2elz_A           10 EKPYKCEDCGKGYNRRLNLDMHQRVHMGEKTSGPSS   45 (46)
T ss_dssp             CSSCBCSSSCCBCSSHHHHHHHGGGGGSCCCCCSCC
T ss_pred             CCCeeCcccCchhCCHHHHHHHHHhcCCCCCCCCCC
Confidence            778888888888888888888888888877777754

>2eml_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.65  E-value=6.6e-09  Score=71.89  Aligned_cols=36  Identities=19%  Similarity=0.398  Sum_probs=29.9

Q ss_pred             ccccccccccCccCCchhhHhhhhhhccCcccccCC
Q 015460           33 AKHFKCHVCHKKLSTAGGMAIHVLQVHKENVTKVPN   68 (406)
Q Consensus        33 EKPfkC~~CgksFss~s~LkrH~rthHgek~~~Cp~   68 (406)
                      +++|+|.+|++.|.++..|++|+++|+++++|.|..
T Consensus        10 ~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~   45 (46)
T 2eml_A           10 EKPYECSVCGKAFSHRQSLSVHQRIHSGKKPSGPSS   45 (46)
T ss_dssp             CCSEECSSSCCEESSHHHHHHHHGGGSSCCCSCSSC
T ss_pred             CCCeeCCCcCCccCCHHHHHHHHHHhcCCCCCCCCC
Confidence            788888888888888888888888888888777754

>2eon_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.65  E-value=9.7e-09  Score=71.28  Aligned_cols=36  Identities=22%  Similarity=0.385  Sum_probs=33.3

Q ss_pred             ccccccccccCccCCchhhHhhhhhhccCcccccCC
Q 015460           33 AKHFKCHVCHKKLSTAGGMAIHVLQVHKENVTKVPN   68 (406)
Q Consensus        33 EKPfkC~~CgksFss~s~LkrH~rthHgek~~~Cp~   68 (406)
                      +|+|+|.+|++.|.++.+|++|+++|+++++|.|+.
T Consensus        10 ~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2eon_A           10 EKPYKCQVCGKAFRVSSHLVQHHSVHSGERPSGPSS   45 (46)
T ss_dssp             CCSCBCSSSCCBCSSHHHHHHHTTTTTSCCSCTTSC
T ss_pred             CcccCCCCCCcccCcHHHHHHHHHhcCCCCCCCCCC
Confidence            899999999999999999999999999999998864

>2eoo_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.65  E-value=4e-09  Score=73.14  Aligned_cols=36  Identities=14%  Similarity=0.384  Sum_probs=28.9

Q ss_pred             ccccccccccCccCCchhhHhhhhhhccCcccccCC
Q 015460           33 AKHFKCHVCHKKLSTAGGMAIHVLQVHKENVTKVPN   68 (406)
Q Consensus        33 EKPfkC~~CgksFss~s~LkrH~rthHgek~~~Cp~   68 (406)
                      +++|+|++|++.|.+.++|++|+++|+++++|+|..
T Consensus        10 ~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2eoo_A           10 ERPYGCNECGKNFGRHSHLIEHLKRHFREKSSGPSS   45 (46)
T ss_dssp             CCCEECSSSCCEESSHHHHHHHHHHHHSTTSSCCSC
T ss_pred             CCCEEccccCcccCCHHHHHHHHHHHcCCCCCCCCC
Confidence            778888888888888888888888888877777754

>2ytq_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.64  E-value=1.1e-08  Score=70.95  Aligned_cols=36  Identities=22%  Similarity=0.378  Sum_probs=29.2

Q ss_pred             ccccccccccCccCCchhhHhhhhhhccCcccccCC
Q 015460           33 AKHFKCHVCHKKLSTAGGMAIHVLQVHKENVTKVPN   68 (406)
Q Consensus        33 EKPfkC~~CgksFss~s~LkrH~rthHgek~~~Cp~   68 (406)
                      +|+|+|.+|++.|.++.+|++|+++|+++++|+|..
T Consensus        10 ~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2ytq_A           10 EKPYGCSECGKAFSSKSYLIIHMRTHSGEKPSGPSS   45 (46)
T ss_dssp             CCSCBCSSSCCBCSCHHHHHHHHTTTCCSCSSCCCC
T ss_pred             CCCcCCCccChhhCChHHHHHHHHHhCCCCCCCCCC
Confidence            788888888888888888888888888887777754

>2em3_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.64  E-value=4.6e-09  Score=72.72  Aligned_cols=36  Identities=22%  Similarity=0.418  Sum_probs=33.2

Q ss_pred             ccccccccccCccCCchhhHhhhhhhccCcccccCC
Q 015460           33 AKHFKCHVCHKKLSTAGGMAIHVLQVHKENVTKVPN   68 (406)
Q Consensus        33 EKPfkC~~CgksFss~s~LkrH~rthHgek~~~Cp~   68 (406)
                      +++|+|.+|++.|.++.+|++|+++|+++++|.|..
T Consensus        10 ~~~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C~~   45 (46)
T 2em3_A           10 EKPYECKVCSKAFTQKAHLAQHQKTHTGEKPSGPSS   45 (46)
T ss_dssp             CCSEECSSSCCEESSHHHHHHHHHHHCCCCCCCSCC
T ss_pred             CcCeECCCCCcccCCHHHHHHHHHHhCCCCCCCCCC
Confidence            889999999999999999999999999999998864

>2yti_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.64  E-value=7.6e-09  Score=71.58  Aligned_cols=36  Identities=22%  Similarity=0.322  Sum_probs=33.0

Q ss_pred             ccccccccccCccCCchhhHhhhhhhccCcccccCC
Q 015460           33 AKHFKCHVCHKKLSTAGGMAIHVLQVHKENVTKVPN   68 (406)
Q Consensus        33 EKPfkC~~CgksFss~s~LkrH~rthHgek~~~Cp~   68 (406)
                      +|+|+|.+|++.|.++.+|++|+++|+++++|.|..
T Consensus        10 ~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2yti_A           10 EKPYKCNECGKVFTQNSHLARHRGIHTGEKPSGPSS   45 (46)
T ss_dssp             CCTTCCSSSCCCCSSHHHHHHHHTTTSCSCCSSTTC
T ss_pred             CcCeECCCCCcccCChhHHHHHhHhcCCCCCCCCCC
Confidence            889999999999999999999999999999998864

>2emy_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.64  E-value=6e-09  Score=72.09  Aligned_cols=36  Identities=19%  Similarity=0.318  Sum_probs=30.0

Q ss_pred             ccccccccccCccCCchhhHhhhhhhccCcccccCC
Q 015460           33 AKHFKCHVCHKKLSTAGGMAIHVLQVHKENVTKVPN   68 (406)
Q Consensus        33 EKPfkC~~CgksFss~s~LkrH~rthHgek~~~Cp~   68 (406)
                      +|+|+|.+|++.|.++.+|++|+++|+++++|.|..
T Consensus        10 ~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2emy_A           10 ENPYECHECGKAFSRKYQLISHQRTHAGEKPSGPSS   45 (46)
T ss_dssp             SCCEECSSSCCEESSHHHHHHHHHHHTTSCCSCSSC
T ss_pred             CcCcCCCCCCcccCcHHHHHHHHHHcCCCCCCCCCC
Confidence            788888888888888888888888888888777754

>2ytp_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.64  E-value=7.9e-09  Score=71.62  Aligned_cols=36  Identities=17%  Similarity=0.400  Sum_probs=33.3

Q ss_pred             ccccccccccCccCCchhhHhhhhhhccCcccccCC
Q 015460           33 AKHFKCHVCHKKLSTAGGMAIHVLQVHKENVTKVPN   68 (406)
Q Consensus        33 EKPfkC~~CgksFss~s~LkrH~rthHgek~~~Cp~   68 (406)
                      +|+|+|.+|++.|.++.+|++|+++|+++++|+|+.
T Consensus        10 ~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2ytp_A           10 ERHYECSECGKAFARKSTLIMHQRIHTGEKPSGPSS   45 (46)
T ss_dssp             CCCEECSSSCCEESSHHHHHHHHTTTSCCCCCSSCC
T ss_pred             CCCeECCcCCcccCCHHHHHHHHHHhCCCCCCCCCC
Confidence            899999999999999999999999999999999864

>2eoq_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.64  E-value=7.9e-09  Score=71.50  Aligned_cols=36  Identities=22%  Similarity=0.433  Sum_probs=30.3

Q ss_pred             ccccccccccCccCCchhhHhhhhhhccCcccccCC
Q 015460           33 AKHFKCHVCHKKLSTAGGMAIHVLQVHKENVTKVPN   68 (406)
Q Consensus        33 EKPfkC~~CgksFss~s~LkrH~rthHgek~~~Cp~   68 (406)
                      +++|+|.+|++.|.++.+|++|+++|+++++|.|..
T Consensus        10 ~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2eoq_A           10 EKPFKCDICGKSFCGRSRLNRHSMVHTAEKPSGPSS   45 (46)
T ss_dssp             SCSCCCSSSCCCCSSHHHHHHHHHHTTCCCSSSCCC
T ss_pred             CCCcCCCcCCchhCCHHHHHHHHHHcCCCCCCCCCC
Confidence            788888888888888888888888888888777754

>2ytr_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.64  E-value=8.1e-09  Score=71.29  Aligned_cols=36  Identities=25%  Similarity=0.376  Sum_probs=29.5

Q ss_pred             ccccccccccCccCCchhhHhhhhhhccCcccccCC
Q 015460           33 AKHFKCHVCHKKLSTAGGMAIHVLQVHKENVTKVPN   68 (406)
Q Consensus        33 EKPfkC~~CgksFss~s~LkrH~rthHgek~~~Cp~   68 (406)
                      +|+|+|.+|++.|.++..|++|+++|+++++|.|..
T Consensus        10 ~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~   45 (46)
T 2ytr_A           10 EKPYKCNECGKAFSQTSKLARHQRIHTGEKPSGPSS   45 (46)
T ss_dssp             CCTTCCTTTCCCCSSHHHHHHHHTTTTTCSCCCSCC
T ss_pred             CcCcCCCCCCCccCCHHHHHHHHHhcCCCCCCCCCC
Confidence            788888888888888888888888888887777754

>2eov_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.64  E-value=8.3e-09  Score=71.25  Aligned_cols=36  Identities=22%  Similarity=0.333  Sum_probs=29.6

Q ss_pred             ccccccccccCccCCchhhHhhhhhhccCcccccCC
Q 015460           33 AKHFKCHVCHKKLSTAGGMAIHVLQVHKENVTKVPN   68 (406)
Q Consensus        33 EKPfkC~~CgksFss~s~LkrH~rthHgek~~~Cp~   68 (406)
                      +++|+|.+|++.|.++..|++|+++|+++++|+|..
T Consensus        10 ~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~   45 (46)
T 2eov_A           10 EKPYKCSDCGKSFTWKSRLRIHQKCHTGERHSGPSS   45 (46)
T ss_dssp             CCSCBCSSSCCBCSSHHHHHHHHHHHSCCSSCCSCC
T ss_pred             CCCccCCccChhhCCHHHHHHHHHhcCCCCCCCCCC
Confidence            788888888888888888888888888888777754

>2ytj_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.64  E-value=6.8e-09  Score=71.82  Aligned_cols=36  Identities=17%  Similarity=0.296  Sum_probs=30.9

Q ss_pred             ccccccccccCccCCchhhHhhhhhhccCcccccCC
Q 015460           33 AKHFKCHVCHKKLSTAGGMAIHVLQVHKENVTKVPN   68 (406)
Q Consensus        33 EKPfkC~~CgksFss~s~LkrH~rthHgek~~~Cp~   68 (406)
                      +++|+|.+|++.|.++++|++|+++|+++++|.|..
T Consensus        10 ~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2ytj_A           10 EKPYICAECGKAFTIRSNLIKHQKIHTKQKPSGPSS   45 (46)
T ss_dssp             CCSEECSSSCCEESSHHHHHHHHHHTSCCCCSSCSC
T ss_pred             CcCeECCCCChhhCCHHHHHHHHHHcCCCCCCCCCC
Confidence            788899999999999999999988888888887764

>2yte_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.64  E-value=9.9e-09  Score=69.35  Aligned_cols=35  Identities=14%  Similarity=0.265  Sum_probs=31.9

Q ss_pred             ccccccccccCccCCchhhHhhhhhhccCcccccC
Q 015460           33 AKHFKCHVCHKKLSTAGGMAIHVLQVHKENVTKVP   67 (406)
Q Consensus        33 EKPfkC~~CgksFss~s~LkrH~rthHgek~~~Cp   67 (406)
                      +|+|+|.+|++.|.++++|++|+++|+++++|.|.
T Consensus         8 ~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   42 (42)
T 2yte_A            8 EKPYSCAECKETFSDNNRLVQHQKMHTVKSGPSSG   42 (42)
T ss_dssp             CCSCBCTTTCCBCSSHHHHHHHHHHTSCCSSCCCC
T ss_pred             CCCeECCCCCCccCCHHHHHHHHHHhCCCCCCCCC
Confidence            88999999999999999999999999999888884

>2em6_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.64  E-value=8.6e-09  Score=71.44  Aligned_cols=36  Identities=25%  Similarity=0.429  Sum_probs=33.0

Q ss_pred             ccccccccccCccCCchhhHhhhhhhccCcccccCC
Q 015460           33 AKHFKCHVCHKKLSTAGGMAIHVLQVHKENVTKVPN   68 (406)
Q Consensus        33 EKPfkC~~CgksFss~s~LkrH~rthHgek~~~Cp~   68 (406)
                      +++|+|.+|++.|.++.+|++|+++|+++++|.|..
T Consensus        10 ~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2em6_A           10 EKCYKCDVCGKEFSQSSHLQTHQRVHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCBCSSSCCBCSSHHHHHHHHTTTSSSCCCCTTC
T ss_pred             CCCeECCCCCcccCCHHHHHHHHHHcCCCCCCCCCC
Confidence            889999999999999999999999999999998864

>2yto_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.64  E-value=6.3e-09  Score=72.14  Aligned_cols=36  Identities=25%  Similarity=0.456  Sum_probs=33.1

Q ss_pred             ccccccccccCccCCchhhHhhhhhhccCcccccCC
Q 015460           33 AKHFKCHVCHKKLSTAGGMAIHVLQVHKENVTKVPN   68 (406)
Q Consensus        33 EKPfkC~~CgksFss~s~LkrH~rthHgek~~~Cp~   68 (406)
                      +|+|+|.+|++.|.++..|++|+++|+++++|+|..
T Consensus        10 ~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2yto_A           10 EKPYKCSDCGKAFTRKSGLHIHQQSHTGERHSGPSS   45 (46)
T ss_dssp             CCCEECSSSCCEESSHHHHHHHHHHHTCCCBTTTBC
T ss_pred             CCCEECcccCCccCCHhHHHHHHHHcCCCCCCCCCC
Confidence            889999999999999999999999999999998864

>2eoe_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.64  E-value=6.8e-09  Score=71.68  Aligned_cols=36  Identities=19%  Similarity=0.292  Sum_probs=29.1

Q ss_pred             ccccccccccCccCCchhhHhhhhhhccCcccccCC
Q 015460           33 AKHFKCHVCHKKLSTAGGMAIHVLQVHKENVTKVPN   68 (406)
Q Consensus        33 EKPfkC~~CgksFss~s~LkrH~rthHgek~~~Cp~   68 (406)
                      +++|+|.+|++.|.++++|++|+++|+++++|.|..
T Consensus        10 ~~~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C~~   45 (46)
T 2eoe_A           10 EKPYKCNECGKVFTQNSHLANHQRIHTGVKPSGPSS   45 (46)
T ss_dssp             CCSSEETTTTEECSSHHHHHHHHGGGSCCCSCSSCC
T ss_pred             CCCeECCCcChhhCCHHHHHHHHHHcCCCCCCCCCC
Confidence            778888888888888888888888888887777754

>2em4_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.63  E-value=9e-09  Score=71.33  Aligned_cols=36  Identities=17%  Similarity=0.326  Sum_probs=33.2

Q ss_pred             ccccccccccCccCCchhhHhhhhhhccCcccccCC
Q 015460           33 AKHFKCHVCHKKLSTAGGMAIHVLQVHKENVTKVPN   68 (406)
Q Consensus        33 EKPfkC~~CgksFss~s~LkrH~rthHgek~~~Cp~   68 (406)
                      +|+|+|.+|++.|.++.+|++|+++|+++++|+|+.
T Consensus        10 ~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2em4_A           10 QRPYECIECGKAFKTKSSLICHRRSHTGEKPSGPSS   45 (46)
T ss_dssp             SSSEECSSSCCEESSHHHHHHHHHHHSSSSCCCCCC
T ss_pred             CcCcCCCCCCCccCCHHHHHHHHHhcCCCCCCCCCC
Confidence            889999999999999999999999999999999864

>2emh_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.63  E-value=6e-09  Score=72.10  Aligned_cols=36  Identities=17%  Similarity=0.328  Sum_probs=29.4

Q ss_pred             ccccccccccCccCCchhhHhhhhhhccCcccccCC
Q 015460           33 AKHFKCHVCHKKLSTAGGMAIHVLQVHKENVTKVPN   68 (406)
Q Consensus        33 EKPfkC~~CgksFss~s~LkrH~rthHgek~~~Cp~   68 (406)
                      +++|+|.+|++.|.++.+|++|+++|+++++|+|..
T Consensus        10 ~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2emh_A           10 ERPYICTVCGKAFTDRSNLIKHQKIHTGEKPSGPSS   45 (46)
T ss_dssp             CCSEECTTTCCEESSHHHHHHHHHHHHCSSCSSSCC
T ss_pred             CCCcCCCCCCchhCCHHHHHHHHHhcCCCCCCCCCC
Confidence            788888888888888888888888888888777754

>2em5_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.63  E-value=5.3e-09  Score=72.53  Aligned_cols=36  Identities=17%  Similarity=0.309  Sum_probs=29.2

Q ss_pred             ccccccccccCccCCchhhHhhhhhhccCcccccCC
Q 015460           33 AKHFKCHVCHKKLSTAGGMAIHVLQVHKENVTKVPN   68 (406)
Q Consensus        33 EKPfkC~~CgksFss~s~LkrH~rthHgek~~~Cp~   68 (406)
                      +++|+|.+|++.|.++.+|++|+++|+++++|+|..
T Consensus        10 ~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~   45 (46)
T 2em5_A           10 TKSHQCHECGRGFTLKSHLNQHQRIHTGEKPSGPSS   45 (46)
T ss_dssp             SCSEECSSSCCEESSHHHHHHHHTTTSCSCCSSCCC
T ss_pred             CCCeECCcCCCccCCHHHHHHHHHHhCCCCCCCCCC
Confidence            778888888888888888888888888887777754

>2eme_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.63  E-value=6e-09  Score=71.98  Aligned_cols=36  Identities=17%  Similarity=0.290  Sum_probs=30.0

Q ss_pred             ccccccccccCccCCchhhHhhhhhhccCcccccCC
Q 015460           33 AKHFKCHVCHKKLSTAGGMAIHVLQVHKENVTKVPN   68 (406)
Q Consensus        33 EKPfkC~~CgksFss~s~LkrH~rthHgek~~~Cp~   68 (406)
                      +++|+|++|++.|.+...|++|+++|+++++|+|..
T Consensus        10 ~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~   45 (46)
T 2eme_A           10 EKPYVCDYCGKAFGLSAELVRHQRIHTGEKPSGPSS   45 (46)
T ss_dssp             CCSEECSSSCCEESSHHHHHHHHGGGCCCSCCSSCC
T ss_pred             CCCeECCCCChhhCCHHHHHHHHHhcCCCCCCCCCC
Confidence            788888888888888888888888888888777754

>2eq1_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.63  E-value=8.6e-09  Score=71.29  Aligned_cols=36  Identities=19%  Similarity=0.397  Sum_probs=33.1

Q ss_pred             ccccccccccCccCCchhhHhhhhhhccCcccccCC
Q 015460           33 AKHFKCHVCHKKLSTAGGMAIHVLQVHKENVTKVPN   68 (406)
Q Consensus        33 EKPfkC~~CgksFss~s~LkrH~rthHgek~~~Cp~   68 (406)
                      +|+|+|.+|++.|.++.+|++|+++|+++++|.|..
T Consensus        10 ~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2eq1_A           10 EKPYKCNECGKAFRAHSNLTTHQVIHTGEKPSGPSS   45 (46)
T ss_dssp             SCCCCCTTTTCCCSSHHHHHHHHTTTCCSCCSSCCC
T ss_pred             CCCeECCcCChhhCCHHHHHHHHHHhCCCCCCCCCC
Confidence            889999999999999999999999999999988864

>2emg_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.63  E-value=1.2e-08  Score=70.62  Aligned_cols=36  Identities=19%  Similarity=0.305  Sum_probs=32.9

Q ss_pred             ccccccccccCccCCchhhHhhhhhhccCcccccCC
Q 015460           33 AKHFKCHVCHKKLSTAGGMAIHVLQVHKENVTKVPN   68 (406)
Q Consensus        33 EKPfkC~~CgksFss~s~LkrH~rthHgek~~~Cp~   68 (406)
                      +++|+|.+|++.|.++.+|++|+++|+++++|+|..
T Consensus        10 ~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~   45 (46)
T 2emg_A           10 ENPFICSECGKVFTHKTNLIIHQKIHTGERPSGPSS   45 (46)
T ss_dssp             CCSCBCTTTCCBCSSHHHHHHHHTTTSCCCCSCSCC
T ss_pred             CCCEECCccCcccCCHHHHHHHHHHhCCCCCCCCCC
Confidence            889999999999999999999999999999888864

>2yts_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.63  E-value=7.7e-09  Score=71.39  Aligned_cols=36  Identities=17%  Similarity=0.254  Sum_probs=33.0

Q ss_pred             ccccccccccCccCCchhhHhhhhhhccCcccccCC
Q 015460           33 AKHFKCHVCHKKLSTAGGMAIHVLQVHKENVTKVPN   68 (406)
Q Consensus        33 EKPfkC~~CgksFss~s~LkrH~rthHgek~~~Cp~   68 (406)
                      +++|+|.+|++.|.++.+|++|+++|+++++|.|..
T Consensus        10 ~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~p~~C~~   45 (46)
T 2yts_A           10 EKPYICNECGKSFIQKSHLNRHRRIHTGEKPSGPSS   45 (46)
T ss_dssp             CCSEECSSSCCEESSHHHHHHHGGGTSSCCSSCCCC
T ss_pred             CcCEECCCCChhhCChHHHHHHHHhcCCCCCcCCCC
Confidence            889999999999999999999999999999988864

>2emx_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.63  E-value=9.2e-09  Score=70.48  Aligned_cols=36  Identities=22%  Similarity=0.410  Sum_probs=28.9

Q ss_pred             ccccccccccCccCCchhhHhhhhhhccCcccccCC
Q 015460           33 AKHFKCHVCHKKLSTAGGMAIHVLQVHKENVTKVPN   68 (406)
Q Consensus        33 EKPfkC~~CgksFss~s~LkrH~rthHgek~~~Cp~   68 (406)
                      +|+|+|.+|++.|.++++|++|+++|+++++|.|..
T Consensus         8 ~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~   43 (44)
T 2emx_A            8 EKPFGCSCCEKAFSSKSYLLVHQQTHAEEKPSGPSS   43 (44)
T ss_dssp             CCCEECSSSSCEESSHHHHHHHHHHHTSSCSCSCCC
T ss_pred             CcCccCCCCCcccCCHHHHHHHHHHhCCCCCCCCCC
Confidence            778888888888888888888888888887777754

>2eq0_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.63  E-value=6.9e-09  Score=71.79  Aligned_cols=36  Identities=28%  Similarity=0.431  Sum_probs=29.1

Q ss_pred             ccccccccccCccCCchhhHhhhhhhccCcccccCC
Q 015460           33 AKHFKCHVCHKKLSTAGGMAIHVLQVHKENVTKVPN   68 (406)
Q Consensus        33 EKPfkC~~CgksFss~s~LkrH~rthHgek~~~Cp~   68 (406)
                      +++|+|.+|++.|.++.+|++|+++|+++++|+|..
T Consensus        10 ~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2eq0_A           10 EKPYKCHECGKVFRRNSHLARHQLIHTGEKPSGPSS   45 (46)
T ss_dssp             CCCEECTTTCCEESSHHHHHHHHTTTCCCCCSCCSC
T ss_pred             CCCeECCCCCchhCCHHHHHHHHHHcCCCCCCCCCC
Confidence            778888888888888888888888888887777754

>2ytg_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.63  E-value=7.3e-09  Score=71.66  Aligned_cols=36  Identities=22%  Similarity=0.288  Sum_probs=31.5

Q ss_pred             ccccccccccCccCCchhhHhhhhhhccCcccccCC
Q 015460           33 AKHFKCHVCHKKLSTAGGMAIHVLQVHKENVTKVPN   68 (406)
Q Consensus        33 EKPfkC~~CgksFss~s~LkrH~rthHgek~~~Cp~   68 (406)
                      +++|+|.+|++.|.++..|++|+++|+++++|+|..
T Consensus        10 ~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2ytg_A           10 EKPFKCGECGKSYNQRVHLTQHQRVHTGEKPSGPSS   45 (46)
T ss_dssp             CCSEECTTTCCEESSSHHHHTTGGGGSSCCSSCSCC
T ss_pred             CCCeECCCCCcccCCHHHHHHHHHHcCCCCCCCCCC
Confidence            788999999999999999999998888888888764

>2emm_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.63  E-value=7.1e-09  Score=71.59  Aligned_cols=36  Identities=17%  Similarity=0.269  Sum_probs=28.8

Q ss_pred             ccccccccccCccCCchhhHhhhhhhccCcccccCC
Q 015460           33 AKHFKCHVCHKKLSTAGGMAIHVLQVHKENVTKVPN   68 (406)
Q Consensus        33 EKPfkC~~CgksFss~s~LkrH~rthHgek~~~Cp~   68 (406)
                      +|+|+|.+|++.|.++.+|++|+++|+++++|.|..
T Consensus        10 ~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2emm_A           10 ERPHKCNECGKSFIQSAHLIQHQRIHTGEKPSGPSS   45 (46)
T ss_dssp             CCSEECSSSCCEESSHHHHHHHHHHHSCCCTTSSSC
T ss_pred             CCCeeCCCCChhhCCHHHHHHHHHHhCCCCCCCCCC
Confidence            778888888888888888888888888877777754

>2ep2_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.63  E-value=7.6e-09  Score=71.58  Aligned_cols=36  Identities=17%  Similarity=0.409  Sum_probs=30.0

Q ss_pred             ccccccccccCccCCchhhHhhhhhhccCcccccCC
Q 015460           33 AKHFKCHVCHKKLSTAGGMAIHVLQVHKENVTKVPN   68 (406)
Q Consensus        33 EKPfkC~~CgksFss~s~LkrH~rthHgek~~~Cp~   68 (406)
                      +++|+|.+|++.|.++.+|++|+++|+++++|+|..
T Consensus        10 ~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2ep2_A           10 EKPYECSICGKSFTKKSQLHVHQQIHTGEKPSGPSS   45 (46)
T ss_dssp             CCSEECSSSCCEESSHHHHHHHHHTTSSCCSCCSCC
T ss_pred             CcCcCCCCCCcccCCHHHHHHHHHHhCCCCCCCCCC
Confidence            788888888888888888888888888888777764

>2ytf_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.63  E-value=7.1e-09  Score=71.60  Aligned_cols=36  Identities=22%  Similarity=0.441  Sum_probs=32.9

Q ss_pred             ccccccccccCccCCchhhHhhhhhhccCcccccCC
Q 015460           33 AKHFKCHVCHKKLSTAGGMAIHVLQVHKENVTKVPN   68 (406)
Q Consensus        33 EKPfkC~~CgksFss~s~LkrH~rthHgek~~~Cp~   68 (406)
                      +|+|+|.+|++.|.++.+|++|+++|+++++|+|..
T Consensus        10 ~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2ytf_A           10 EKPFECSECQKAFNTKSNLIVHQRTHTGEKPSGPSS   45 (46)
T ss_dssp             CCSEECSSSCCEESSHHHHHHHHHTSCSSSSSCCCC
T ss_pred             CCCcCCCCCCcccCCHHHHHHHHHHhCCCCCCCCCC
Confidence            889999999999999999999999999999888864

>2en8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.63  E-value=7.2e-09  Score=71.55  Aligned_cols=36  Identities=19%  Similarity=0.319  Sum_probs=29.4

Q ss_pred             ccccccccccCccCCchhhHhhhhhhccCcccccCC
Q 015460           33 AKHFKCHVCHKKLSTAGGMAIHVLQVHKENVTKVPN   68 (406)
Q Consensus        33 EKPfkC~~CgksFss~s~LkrH~rthHgek~~~Cp~   68 (406)
                      +++|+|.+|++.|.+..+|++|+++|+++++|+|..
T Consensus        10 ~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2en8_A           10 EKSHTCDECGKNFCYISALRIHQRVHMGEKCSGPSS   45 (46)
T ss_dssp             CSSEECTTTCCEESSHHHHHHHHTTTCCSCSSCCSC
T ss_pred             CCCeECCCcCcccCCHHHHHHHHHHhCCCCCCCCCC
Confidence            788888888888888888888888888888777754

>2enh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.62  E-value=1.4e-08  Score=70.28  Aligned_cols=36  Identities=22%  Similarity=0.409  Sum_probs=33.3

Q ss_pred             ccccccccccCccCCchhhHhhhhhhccCcccccCC
Q 015460           33 AKHFKCHVCHKKLSTAGGMAIHVLQVHKENVTKVPN   68 (406)
Q Consensus        33 EKPfkC~~CgksFss~s~LkrH~rthHgek~~~Cp~   68 (406)
                      +|+|+|.+|++.|.++.+|++|+++|+++++|+|..
T Consensus        10 ~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2enh_A           10 EKPYECDVCRKAFSHHASLTQHQRVHSGEKPSGPSS   45 (46)
T ss_dssp             SSSCBCTTTCCBCSSSHHHHHHGGGSCCSCCCCCCC
T ss_pred             CCCcCCCCcCchhCCHHHHHHHHHHhCCCCCCCCCC
Confidence            889999999999999999999999999999998864

>2em7_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.62  E-value=1.1e-08  Score=70.77  Aligned_cols=36  Identities=19%  Similarity=0.327  Sum_probs=29.3

Q ss_pred             ccccccccccCccCCchhhHhhhhhhccCcccccCC
Q 015460           33 AKHFKCHVCHKKLSTAGGMAIHVLQVHKENVTKVPN   68 (406)
Q Consensus        33 EKPfkC~~CgksFss~s~LkrH~rthHgek~~~Cp~   68 (406)
                      +|+|+|.+|++.|.++.+|++|+++|+++++|+|..
T Consensus        10 ~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2em7_A           10 EKPYKCEECGKGFICRRDLYTHHMVHTGEKPSGPSS   45 (46)
T ss_dssp             CCSEECSSSCCEESCHHHHHHHGGGGTTCCCSSTTC
T ss_pred             CcCccCCCccchhCCHHHHHHHHHHhCCCCCCCCCC
Confidence            778888888888888888888888888887777754

>2emi_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.62  E-value=1.1e-08  Score=70.77  Aligned_cols=36  Identities=17%  Similarity=0.401  Sum_probs=33.1

Q ss_pred             ccccccccccCccCCchhhHhhhhhhccCcccccCC
Q 015460           33 AKHFKCHVCHKKLSTAGGMAIHVLQVHKENVTKVPN   68 (406)
Q Consensus        33 EKPfkC~~CgksFss~s~LkrH~rthHgek~~~Cp~   68 (406)
                      +++|+|.+|++.|.++..|++|+++|+++++|+|..
T Consensus        10 ~~~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2emi_A           10 ERHYECSECGKAFIQKSTLSMHQRIHRGEKPSGPSS   45 (46)
T ss_dssp             CCCEECSSSCCEESSHHHHHHHHGGGCSCCCCSCCC
T ss_pred             CCCCCCCCCCcccCCHHHHHHHHhHhCCCCCCCCCC
Confidence            889999999999999999999999999999988864

>2en7_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.62  E-value=8.6e-09  Score=70.36  Aligned_cols=35  Identities=20%  Similarity=0.316  Sum_probs=32.1

Q ss_pred             ccccccccccCccCCchhhHhhhhhhccCcccccC
Q 015460           33 AKHFKCHVCHKKLSTAGGMAIHVLQVHKENVTKVP   67 (406)
Q Consensus        33 EKPfkC~~CgksFss~s~LkrH~rthHgek~~~Cp   67 (406)
                      +++|+|.+|++.|.++..|++|+++|+++++|.|+
T Consensus        10 ~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (44)
T 2en7_A           10 MKPYVCNECGKAFRSKSYLIIHTRTHTGESGPSSG   44 (44)
T ss_dssp             SSSSCCTTTCCCCSSHHHHHHHHTTTCCSSSSCCC
T ss_pred             CcCeECCCCCCccCCHHHHHHHhhhcCCCCCCCCC
Confidence            88999999999999999999999999999988884

>2eoz_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.62  E-value=6.2e-09  Score=72.16  Aligned_cols=36  Identities=19%  Similarity=0.426  Sum_probs=33.1

Q ss_pred             ccccccccccCccCCchhhHhhhhhhccCcccccCC
Q 015460           33 AKHFKCHVCHKKLSTAGGMAIHVLQVHKENVTKVPN   68 (406)
Q Consensus        33 EKPfkC~~CgksFss~s~LkrH~rthHgek~~~Cp~   68 (406)
                      +++|+|.+|++.|.++..|++|+++|+++++|+|..
T Consensus        10 ~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~   45 (46)
T 2eoz_A           10 EKPYSCNVCGKAFVLSAHLNQHLRVHTQETLSGPSS   45 (46)
T ss_dssp             CCSEEETTTTEEESSHHHHHHHHHHHSSCCSSSCCC
T ss_pred             CCCeECcccChhhCCHHHHHHHHHHhCCCCCCCCCC
Confidence            889999999999999999999999999999998864

>2emj_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eoi_A

Probab=98.62  E-value=9.8e-09  Score=71.13  Aligned_cols=36  Identities=25%  Similarity=0.378  Sum_probs=32.9

Q ss_pred             ccccccccccCccCCchhhHhhhhhhccCcccccCC
Q 015460           33 AKHFKCHVCHKKLSTAGGMAIHVLQVHKENVTKVPN   68 (406)
Q Consensus        33 EKPfkC~~CgksFss~s~LkrH~rthHgek~~~Cp~   68 (406)
                      +|+|+|.+|++.|.++.+|++|+++|+++++|+|..
T Consensus        10 ~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2emj_A           10 EKPFECAECGKSFSISSQLATHQRIHTGEKPSGPSS   45 (46)
T ss_dssp             CCSEECSSSSCEESSHHHHHHHHHHHTTSCSSSSCC
T ss_pred             CCCEECCCCCcccCCHHHHHHHHHHhCCCCCCCCCC
Confidence            889999999999999999999999999999888864

>2yu8_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.62  E-value=7.1e-09  Score=71.71  Aligned_cols=36  Identities=19%  Similarity=0.305  Sum_probs=29.2

Q ss_pred             ccccccccccCccCCchhhHhhhhhhccCcccccCC
Q 015460           33 AKHFKCHVCHKKLSTAGGMAIHVLQVHKENVTKVPN   68 (406)
Q Consensus        33 EKPfkC~~CgksFss~s~LkrH~rthHgek~~~Cp~   68 (406)
                      +|+|+|.+|++.|.++.+|++|+++|+++++|.|..
T Consensus        10 ~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~   45 (46)
T 2yu8_A           10 EKPYKCNECGKVFTQNSHLARHRRVHTGGKPSGPSS   45 (46)
T ss_dssp             CSSEECSSSCCEESSSHHHHHHTHHHHSCCCSCSCC
T ss_pred             CCCeECCcCCchhCCHHHHHHHHHhcCCCCCCCCCC
Confidence            778888888888888888888888888887777754

>2eow_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.62  E-value=7.5e-09  Score=71.46  Aligned_cols=36  Identities=25%  Similarity=0.449  Sum_probs=32.8

Q ss_pred             ccccccccccCccCCchhhHhhhhhhccCcccccCC
Q 015460           33 AKHFKCHVCHKKLSTAGGMAIHVLQVHKENVTKVPN   68 (406)
Q Consensus        33 EKPfkC~~CgksFss~s~LkrH~rthHgek~~~Cp~   68 (406)
                      +|+|+|.+|++.|.++..|++|+++|+++++|+|..
T Consensus        10 ~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2eow_A           10 EKPYKCNECGKAFRARSSLAIHQATHSGEKPSGPSS   45 (46)
T ss_dssp             CCCEECTTSCCEESSHHHHHHHHHHHCCCSCSCTTC
T ss_pred             CCCeeccccCChhcCHHHHHHHHHHcCCCCCCCCCC
Confidence            889999999999999999999999999999988864

>2ytk_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.62  E-value=7.8e-09  Score=71.53  Aligned_cols=36  Identities=19%  Similarity=0.316  Sum_probs=29.9

Q ss_pred             ccccccccccCccCCchhhHhhhhhhccCcccccCC
Q 015460           33 AKHFKCHVCHKKLSTAGGMAIHVLQVHKENVTKVPN   68 (406)
Q Consensus        33 EKPfkC~~CgksFss~s~LkrH~rthHgek~~~Cp~   68 (406)
                      +++|+|.+|++.|.++.+|++|+++|+++++|.|..
T Consensus        10 ~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~   45 (46)
T 2ytk_A           10 EKPYKCNECGKVFTQNSHLTNHWRIHTGEKPSGPSS   45 (46)
T ss_dssp             SCSEECSSSCCEESSHHHHHHHHHHHSSSSCSSCCC
T ss_pred             CCCEeCCcCCCccCCHHHHHHHHHHHCCCCCCCCCC
Confidence            788888888888888888888888888888777754

>2emp_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.62  E-value=7.3e-09  Score=71.66  Aligned_cols=36  Identities=19%  Similarity=0.360  Sum_probs=28.8

Q ss_pred             ccccccccccCccCCchhhHhhhhhhccCcccccCC
Q 015460           33 AKHFKCHVCHKKLSTAGGMAIHVLQVHKENVTKVPN   68 (406)
Q Consensus        33 EKPfkC~~CgksFss~s~LkrH~rthHgek~~~Cp~   68 (406)
                      +++|+|.+|++.|.+++.|++|+++|+++++|+|..
T Consensus        10 ~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2emp_A           10 VKPYMCNECGKAFSVYSSLTTHQVIHTGEKPSGPSS   45 (46)
T ss_dssp             CCSEECSSSCCEESCHHHHHHHHHHHHCCSCCSCCC
T ss_pred             CcCeECCCCCchhCCHHHHHHHHHHcCCCCCCCCCC
Confidence            778888888888888888888888888877777754

>2ytm_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.62  E-value=1.2e-08  Score=70.83  Aligned_cols=36  Identities=17%  Similarity=0.277  Sum_probs=28.2

Q ss_pred             ccccccccccCccCCchhhHhhhhhhccCcccccCC
Q 015460           33 AKHFKCHVCHKKLSTAGGMAIHVLQVHKENVTKVPN   68 (406)
Q Consensus        33 EKPfkC~~CgksFss~s~LkrH~rthHgek~~~Cp~   68 (406)
                      +|+|+|.+|++.|.++..|++|+++|+++++|+|..
T Consensus        10 ~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~   45 (46)
T 2ytm_A           10 EKPYKCMECGKAFGDNSSCTQHQRLHTGQRPSGPSS   45 (46)
T ss_dssp             CCSSSBTTTTBCCSSHHHHHHHHHHHHSCCCCCCCC
T ss_pred             CCCcCCCCCCchhCCHHHHHHHHHHcCCCCCCCCCC
Confidence            778888888888888888888888887777777754

>2yrj_A Zinc finger protein 473; C2H2-type zinc finger, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.62  E-value=8e-09  Score=71.32  Aligned_cols=36  Identities=17%  Similarity=0.331  Sum_probs=32.9

Q ss_pred             ccccccccccCccCCchhhHhhhhhhccCcccccCC
Q 015460           33 AKHFKCHVCHKKLSTAGGMAIHVLQVHKENVTKVPN   68 (406)
Q Consensus        33 EKPfkC~~CgksFss~s~LkrH~rthHgek~~~Cp~   68 (406)
                      +++|+|.+|++.|.++.+|++|+++|+++++|.|..
T Consensus        10 ~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2yrj_A           10 EKPYRCGECGKAFAQKANLTQHQRIHTGEKPSGPSS   45 (46)
T ss_dssp             CCCEECSSSCCEESSHHHHHHHHTTTSSCCSSCSCC
T ss_pred             CCCeECCCCCCccCCHHHHHHHHHHcCCCCCCCCCC
Confidence            889999999999999999999999999999888864

>2epw_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.61  E-value=8.7e-09  Score=71.13  Aligned_cols=36  Identities=17%  Similarity=0.270  Sum_probs=30.0

Q ss_pred             ccccccccccCccCCchhhHhhhhhhccCcccccCC
Q 015460           33 AKHFKCHVCHKKLSTAGGMAIHVLQVHKENVTKVPN   68 (406)
Q Consensus        33 EKPfkC~~CgksFss~s~LkrH~rthHgek~~~Cp~   68 (406)
                      +++|+|.+|++.|.++..|++|+++|+++++|.|..
T Consensus        10 ~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2epw_A           10 EKPCKCTECGKAFCWKSQLIMHQRTHVDDKHSGPSS   45 (46)
T ss_dssp             CCSEECSSSCCEESSSHHHHHHHHHCCSCCCSCCCC
T ss_pred             CCCeeCCCCCCccCCHHHHHHHHHHhCCCCCCCCCC
Confidence            788888888888888888888888888888777754

>2ytd_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.61  E-value=8.4e-09  Score=71.34  Aligned_cols=36  Identities=17%  Similarity=0.215  Sum_probs=29.3

Q ss_pred             ccccccccccCccCCchhhHhhhhhhccCcccccCC
Q 015460           33 AKHFKCHVCHKKLSTAGGMAIHVLQVHKENVTKVPN   68 (406)
Q Consensus        33 EKPfkC~~CgksFss~s~LkrH~rthHgek~~~Cp~   68 (406)
                      +|+|+|.+|++.|.++..|++|+++|+++++|+|..
T Consensus        10 ~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~   45 (46)
T 2ytd_A           10 EKPYKCSECGKAFHRHTHLNEHRRIHTGYRPSGPSS   45 (46)
T ss_dssp             CCSEECSSSCCEESSHHHHHHHHHHHTCCCSSCSSC
T ss_pred             CcCeECCCCCCeeCChHHHHHHHHHcCCCCCCCCCC
Confidence            778888888888888888888888888888777754

>2en1_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.61  E-value=6.7e-09  Score=71.84  Aligned_cols=36  Identities=22%  Similarity=0.381  Sum_probs=29.7

Q ss_pred             ccccccccccCccCCchhhHhhhhhhccCcccccCC
Q 015460           33 AKHFKCHVCHKKLSTAGGMAIHVLQVHKENVTKVPN   68 (406)
Q Consensus        33 EKPfkC~~CgksFss~s~LkrH~rthHgek~~~Cp~   68 (406)
                      +++|+|.+|++.|.++.+|++|+++|+++++|.|..
T Consensus        10 ~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~   45 (46)
T 2en1_A           10 EKPFKCEECGKRFTQNSQLHSHQRVHTGEKPSGPSS   45 (46)
T ss_dssp             CCSEEETTTTEEESSHHHHHHHGGGGSCCCCSCCCC
T ss_pred             CCCeeCCCCCcccCCHHHHHHHHHHcCCCCCCCCCC
Confidence            788888888888888888888888888888777754

>2ene_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.61  E-value=1.1e-08  Score=70.68  Aligned_cols=36  Identities=19%  Similarity=0.292  Sum_probs=28.9

Q ss_pred             ccccccccccCccCCchhhHhhhhhhccCcccccCC
Q 015460           33 AKHFKCHVCHKKLSTAGGMAIHVLQVHKENVTKVPN   68 (406)
Q Consensus        33 EKPfkC~~CgksFss~s~LkrH~rthHgek~~~Cp~   68 (406)
                      +|+|+|.+|++.|.+++.|++|+++|+++++|+|..
T Consensus        10 ~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2ene_A           10 EKPYKCNECGKVFRHNSYLSRHQRIHTGEKPSGPSS   45 (46)
T ss_dssp             SSSEECSSSCCEESSHHHHHHHHTTTCCCCCCSCCC
T ss_pred             CCCeECCCCCchhCChHHHHHHHhhcCCCCCCCCCC
Confidence            778888888888888888888888888877777754

>2emz_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.61  E-value=8.5e-09  Score=71.47  Aligned_cols=36  Identities=22%  Similarity=0.408  Sum_probs=32.7

Q ss_pred             ccccccccccCccCCchhhHhhhhhhccCcccccCC
Q 015460           33 AKHFKCHVCHKKLSTAGGMAIHVLQVHKENVTKVPN   68 (406)
Q Consensus        33 EKPfkC~~CgksFss~s~LkrH~rthHgek~~~Cp~   68 (406)
                      +|+|+|.+|++.|.+..+|++|+++|+++++|.|..
T Consensus        10 ~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2emz_A           10 ERPFKCNECGKGFGRRSHLAGHLRLHSREKSSGPSS   45 (46)
T ss_dssp             CCSCCCSSSCCCCSSHHHHHHHHHHHHHTTCCCSCC
T ss_pred             CCCeECCCCCcccCCHHHHHHHHHHhCCCCCCCCCC
Confidence            889999999999999999999999999999888864

>2yu5_A Zinc finger protein 473; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.61  E-value=8.4e-09  Score=70.67  Aligned_cols=35  Identities=14%  Similarity=0.296  Sum_probs=32.2

Q ss_pred             ccccccccccCccCCchhhHhhhhhhccCcccccC
Q 015460           33 AKHFKCHVCHKKLSTAGGMAIHVLQVHKENVTKVP   67 (406)
Q Consensus        33 EKPfkC~~CgksFss~s~LkrH~rthHgek~~~Cp   67 (406)
                      +|+|+|.+|++.|.+..+|++|+++|+++++|.|.
T Consensus        10 ~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (44)
T 2yu5_A           10 ENPFKCSKCDRVFTQRNYLVQHERTHARKSGPSSG   44 (44)
T ss_dssp             CCSEECSSSSCEESSSHHHHHHHHHCCCCCSSCCC
T ss_pred             CCCeECCCCCchhCCHHHHHHHhHhcCCCCCCCCC
Confidence            89999999999999999999999999999988884

>2em9_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2yrh_A

Probab=98.60  E-value=1.4e-08  Score=70.13  Aligned_cols=36  Identities=19%  Similarity=0.281  Sum_probs=29.4

Q ss_pred             ccccccccccCccCCchhhHhhhhhhccCcccccCC
Q 015460           33 AKHFKCHVCHKKLSTAGGMAIHVLQVHKENVTKVPN   68 (406)
Q Consensus        33 EKPfkC~~CgksFss~s~LkrH~rthHgek~~~Cp~   68 (406)
                      +|+|+|.+|++.|.+...|++|+++|+++++|+|..
T Consensus        10 ~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~   45 (46)
T 2em9_A           10 EKPYNCKECGKSFRWASCLLKHQRVHSGEKPSGPSS   45 (46)
T ss_dssp             CCSEECSSSCCEESSHHHHHHHGGGGTSCCCCSTTC
T ss_pred             CcCeECCccccccCChHHHHHHHHHhCCCCCCCCCC
Confidence            788888888888888888888888888888777754

>2eor_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.60  E-value=1.1e-08  Score=70.58  Aligned_cols=36  Identities=17%  Similarity=0.273  Sum_probs=32.9

Q ss_pred             ccccccccccCccCCchhhHhhhhhhccCcccccCC
Q 015460           33 AKHFKCHVCHKKLSTAGGMAIHVLQVHKENVTKVPN   68 (406)
Q Consensus        33 EKPfkC~~CgksFss~s~LkrH~rthHgek~~~Cp~   68 (406)
                      +++|+|.+|++.|.++.+|++|+++|+++++|.|+.
T Consensus        10 ~~~~~C~~C~k~f~~~~~L~~H~~~H~~~kp~~C~~   45 (46)
T 2eor_A           10 EKPYNCEECGKAFIHDSQLQEHQRIHTGEKPSGPSS   45 (46)
T ss_dssp             CCSEECTTTCCEESSHHHHHHHHHHHHSCCCSSSTT
T ss_pred             CcCccCCCCCCCcCCHHHHHHHHHhcCCCCCCCCCC
Confidence            889999999999999999999999999999888864

>2ytb_A Zinc finger protein 32; zinc-finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.60  E-value=9.4e-09  Score=69.45  Aligned_cols=34  Identities=21%  Similarity=0.473  Sum_probs=31.7

Q ss_pred             ccccccccccCccCCchhhHhhhhhhccCccccc
Q 015460           33 AKHFKCHVCHKKLSTAGGMAIHVLQVHKENVTKV   66 (406)
Q Consensus        33 EKPfkC~~CgksFss~s~LkrH~rthHgek~~~C   66 (406)
                      +++|+|.+|++.|.++++|++|+++|+++++|.|
T Consensus         9 ~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   42 (42)
T 2ytb_A            9 EKPYRCDQCGKAFSQKGSLIVHIRVHTGSGPSSG   42 (42)
T ss_dssp             CCSBCCTTTTCCBSSHHHHHTTGGGTSCCSCCCC
T ss_pred             CCCeeCCCccchhCCHHHHHHHHHHhCCCCCCCC
Confidence            8899999999999999999999999999998877

>2en9_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.60  E-value=1.6e-08  Score=69.98  Aligned_cols=36  Identities=22%  Similarity=0.452  Sum_probs=33.0

Q ss_pred             ccccccccccCccCCchhhHhhhhhhccCcccccCC
Q 015460           33 AKHFKCHVCHKKLSTAGGMAIHVLQVHKENVTKVPN   68 (406)
Q Consensus        33 EKPfkC~~CgksFss~s~LkrH~rthHgek~~~Cp~   68 (406)
                      +|+|+|.+|++.|.++..|++|+++|+++++|.|..
T Consensus        10 ~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2en9_A           10 KKLFKCNECKKTFTQSSSLTVHQRIHTGEKPSGPSS   45 (46)
T ss_dssp             SCCCBCTTTCCBCSSHHHHHHHHHHHTSSCCCSCCC
T ss_pred             CCCEECCccCcccCCHHHHHHHHHHcCCCCCCCCCC
Confidence            889999999999999999999999999999988864

>2em2_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.59  E-value=1.3e-08  Score=70.47  Aligned_cols=36  Identities=25%  Similarity=0.346  Sum_probs=30.9

Q ss_pred             ccccccccccCccCCchhhHhhhhhhccCcccccCC
Q 015460           33 AKHFKCHVCHKKLSTAGGMAIHVLQVHKENVTKVPN   68 (406)
Q Consensus        33 EKPfkC~~CgksFss~s~LkrH~rthHgek~~~Cp~   68 (406)
                      +|+|+|.+|++.|.++.+|++|+++|+++++|+|..
T Consensus        10 ~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2em2_A           10 EKPFKCKECGKAFRQNIHLASHLRIHTGEKPSGPSS   45 (46)
T ss_dssp             CCSEECSSSCCEESSHHHHHHHHHHHCCCCSSCSSC
T ss_pred             CCCEECCcCCchhCCHHHHHHHHHHhCCCCCCCCCC
Confidence            788899999999999999999988888888888864

>2eof_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.59  E-value=9.3e-09  Score=70.18  Aligned_cols=35  Identities=20%  Similarity=0.414  Sum_probs=32.1

Q ss_pred             ccccccccccCccCCchhhHhhhhhhccCcccccC
Q 015460           33 AKHFKCHVCHKKLSTAGGMAIHVLQVHKENVTKVP   67 (406)
Q Consensus        33 EKPfkC~~CgksFss~s~LkrH~rthHgek~~~Cp   67 (406)
                      +++|+|.+|++.|.+..+|++|+++|+++++|.|+
T Consensus        10 ~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (44)
T 2eof_A           10 EKPYECNECQKAFNTKSNLMVHQRTHTGESGPSSG   44 (44)
T ss_dssp             CCSEECTTTCCEESCHHHHHHHHHHTTTSSCSCCC
T ss_pred             CCCeECCCCCcccCCHhHHHHHHHHhCCCCCCCCC
Confidence            88999999999999999999999999999988884

>2en3_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.59  E-value=8.6e-09  Score=71.29  Aligned_cols=36  Identities=17%  Similarity=0.335  Sum_probs=33.0

Q ss_pred             ccccccccccCccCCchhhHhhhhhhccCcccccCC
Q 015460           33 AKHFKCHVCHKKLSTAGGMAIHVLQVHKENVTKVPN   68 (406)
Q Consensus        33 EKPfkC~~CgksFss~s~LkrH~rthHgek~~~Cp~   68 (406)
                      +|+|+|.+|++.|.+..+|++|+++|+++++|+|+.
T Consensus        10 ~k~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C~~   45 (46)
T 2en3_A           10 EKPFQCKECGMNFSWSCSLFKHLRSHERTDPSGPSS   45 (46)
T ss_dssp             CCSEECSSSCCEESSSHHHHHHHHHHHHSCCSSCSC
T ss_pred             CCCeeCcccChhhCCHHHHHHHHHHhCCCCCCCCCC
Confidence            889999999999999999999999999999998864

>2eoj_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.59  E-value=1.1e-08  Score=69.91  Aligned_cols=35  Identities=14%  Similarity=0.246  Sum_probs=31.9

Q ss_pred             ccccccccccCccCCchhhHhhhhhhccCcccccC
Q 015460           33 AKHFKCHVCHKKLSTAGGMAIHVLQVHKENVTKVP   67 (406)
Q Consensus        33 EKPfkC~~CgksFss~s~LkrH~rthHgek~~~Cp   67 (406)
                      +|+|+|.+|++.|.++.+|++|+++|+++++|+|+
T Consensus        10 ~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (44)
T 2eoj_A           10 ENPYECCECGKVFSRKDQLVSHQKTHSGQSGPSSG   44 (44)
T ss_dssp             CCSCEETTTTEECSSHHHHHHHHTTSSSSCSCCCC
T ss_pred             CcCeeCCCCCCccCCHHHHHHHHHHcCCCCCCCCC
Confidence            88999999999999999999999999999888884

>2el6_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens}

Probab=98.59  E-value=1.7e-08  Score=69.96  Aligned_cols=36  Identities=19%  Similarity=0.365  Sum_probs=28.4

Q ss_pred             ccccccccccCccCCchhhHhhhhhhccCcccccCC
Q 015460           33 AKHFKCHVCHKKLSTAGGMAIHVLQVHKENVTKVPN   68 (406)
Q Consensus        33 EKPfkC~~CgksFss~s~LkrH~rthHgek~~~Cp~   68 (406)
                      +|+|+|.+|++.|.++.+|++|+++|+++++|.|..
T Consensus        10 ~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~   45 (46)
T 2el6_A           10 VNPYKCSQCEKSFSGKLRLLVHQRMHTREKPSGPSS   45 (46)
T ss_dssp             CCSEECSSSSCEESSHHHHHHHHGGGCCSSCCSCCC
T ss_pred             CCCeECCCCCcccCCHHHHHHHHHHcCCCCCCCCCC
Confidence            778888888888888888888888888777777754

>2enc_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.58  E-value=1.5e-08  Score=70.04  Aligned_cols=36  Identities=25%  Similarity=0.307  Sum_probs=28.2

Q ss_pred             ccccccccccCccCCchhhHhhhhhhccCcccccCC
Q 015460           33 AKHFKCHVCHKKLSTAGGMAIHVLQVHKENVTKVPN   68 (406)
Q Consensus        33 EKPfkC~~CgksFss~s~LkrH~rthHgek~~~Cp~   68 (406)
                      +|+|+|.+|++.|.++..|++|+++|+++++|+|..
T Consensus        10 ~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~   45 (46)
T 2enc_A           10 EKPFKCEECGKGFYTNSQCYSHQRSHSGEKPSGPSS   45 (46)
T ss_dssp             CCSEECSSSCCEESSHHHHHHHHHHSCCSSCCSSCC
T ss_pred             CCCcCCCCCCCcCCChHHHHHHHHHhCCCCCCCCCC
Confidence            778888888888888888888888887777777754

>2eos_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.58  E-value=1.5e-08  Score=68.63  Aligned_cols=34  Identities=12%  Similarity=0.302  Sum_probs=31.0

Q ss_pred             ccccccccccCccCCchhhHhhhhhhccCccccc
Q 015460           33 AKHFKCHVCHKKLSTAGGMAIHVLQVHKENVTKV   66 (406)
Q Consensus        33 EKPfkC~~CgksFss~s~LkrH~rthHgek~~~C   66 (406)
                      +|+|+|.+|++.|.+++.|++|+++|+++++|+|
T Consensus         9 ~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   42 (42)
T 2eos_A            9 EKPYPCEICGTRFRHLQTLKSHLRIHTGSGPSSG   42 (42)
T ss_dssp             SCCBCCSSSCCCBSSHHHHHHHTTTTSCCSSTTC
T ss_pred             CCCEECCCCCCccCCHHHHHHHHHhcCCCCCCCC
Confidence            8899999999999999999999999999888877

>2ysp_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.58  E-value=1.2e-08  Score=70.53  Aligned_cols=36  Identities=19%  Similarity=0.321  Sum_probs=28.3

Q ss_pred             ccccccccccCccCCchhhHhhhhhhccCcccccCC
Q 015460           33 AKHFKCHVCHKKLSTAGGMAIHVLQVHKENVTKVPN   68 (406)
Q Consensus        33 EKPfkC~~CgksFss~s~LkrH~rthHgek~~~Cp~   68 (406)
                      +|+|+|.+|++.|.++.+|++|+++|+++++|+|..
T Consensus        10 ~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~   45 (46)
T 2ysp_A           10 EKPYKCEKCGKGYNSKFNLDMHQKVHTGERPSGPSS   45 (46)
T ss_dssp             CCSEEETTTTEEESCHHHHHHHHTTSCSCCSSCCSC
T ss_pred             CCCeECCCCCCccCCHHHHHHHHHhhCCCCCCCCCC
Confidence            778888888888888888888888887777777754

>2en6_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.58  E-value=9.8e-09  Score=71.01  Aligned_cols=36  Identities=19%  Similarity=0.321  Sum_probs=28.3

Q ss_pred             ccccccccccCccCCchhhHhhhhhhccCcccccCC
Q 015460           33 AKHFKCHVCHKKLSTAGGMAIHVLQVHKENVTKVPN   68 (406)
Q Consensus        33 EKPfkC~~CgksFss~s~LkrH~rthHgek~~~Cp~   68 (406)
                      +++|+|.+|++.|.++.+|++|+++|+++++|.|..
T Consensus        10 ~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2en6_A           10 EKPYGCNECGKTFSQKSILSAHQRTHTGEKPSGPSS   45 (46)
T ss_dssp             SCCEEETTTTEEESSHHHHHHHHHHHSSCCCSSSCC
T ss_pred             CcCeECCCCCcccCchHHHHHHHHHcCCCCCCCCCC
Confidence            777888888888888888888888887777777754

>2yso_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.57  E-value=1.6e-08  Score=69.89  Aligned_cols=36  Identities=11%  Similarity=0.166  Sum_probs=28.4

Q ss_pred             ccccccccccCccCCchhhHhhhhhhccCcccccCC
Q 015460           33 AKHFKCHVCHKKLSTAGGMAIHVLQVHKENVTKVPN   68 (406)
Q Consensus        33 EKPfkC~~CgksFss~s~LkrH~rthHgek~~~Cp~   68 (406)
                      +++|+|.+|++.|.+...|++|+++|+++++|+|..
T Consensus        10 ~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2yso_A           10 EKSHQCRECGEIFFQYVSLIEHQVLHMGQKNSGPSS   45 (46)
T ss_dssp             CCCEECTTTCCEESSHHHHHHHHHHHSCCSCCCTTC
T ss_pred             CCCEEccccChhhCCHHHHHHHHHHhCCCCCCCCCC
Confidence            777888888888888888888888887777777754

>2em8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.57  E-value=1.5e-08  Score=70.12  Aligned_cols=36  Identities=19%  Similarity=0.300  Sum_probs=27.4

Q ss_pred             ccccccccccCccCCchhhHhhhhhhccCcccccCC
Q 015460           33 AKHFKCHVCHKKLSTAGGMAIHVLQVHKENVTKVPN   68 (406)
Q Consensus        33 EKPfkC~~CgksFss~s~LkrH~rthHgek~~~Cp~   68 (406)
                      +|+|+|.+|++.|.++.+|++|+++|+++++|.|..
T Consensus        10 ~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~   45 (46)
T 2em8_A           10 EKPYKCVECGKGYKRRLDLDFHQRVHTGEKLSGPSS   45 (46)
T ss_dssp             CCSEECSSSCCEESSHHHHHHHHHHHHCCCCCCSCC
T ss_pred             CCCeECcccCchhCCHHHHHHHHHHHcCCCCCCCCC
Confidence            677788888888888888888877777777777654

>2epr_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.57  E-value=3.7e-08  Score=69.02  Aligned_cols=34  Identities=21%  Similarity=0.308  Sum_probs=16.9

Q ss_pred             ccccccccccCccCCchhhHhhhhhhccCccccc
Q 015460           33 AKHFKCHVCHKKLSTAGGMAIHVLQVHKENVTKV   66 (406)
Q Consensus        33 EKPfkC~~CgksFss~s~LkrH~rthHgek~~~C   66 (406)
                      +++|+|.+|++.|.+...|++|+++|+++++|.|
T Consensus        10 ~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C   43 (48)
T 2epr_A           10 RKQVACEICGKIFRDVYHLNRHKLSHSGEKPYSS   43 (48)
T ss_dssp             CCSEEETTTTEEESSHHHHHHHGGGSCSCCCCCS
T ss_pred             CcCeeCCCCCcccCCHHHHHHHHHhcCCCCCccC
Confidence            4455555555555555555555555544444333

>2eq3_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.57  E-value=1.2e-08  Score=70.45  Aligned_cols=36  Identities=17%  Similarity=0.351  Sum_probs=32.8

Q ss_pred             ccccccccccCccCCchhhHhhhhhhccCcccccCC
Q 015460           33 AKHFKCHVCHKKLSTAGGMAIHVLQVHKENVTKVPN   68 (406)
Q Consensus        33 EKPfkC~~CgksFss~s~LkrH~rthHgek~~~Cp~   68 (406)
                      +++|+|.+|++.|.+...|++|+++|+++++|.|..
T Consensus        10 ~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2eq3_A           10 EKPYECNQCGKAFSVRSSLTTHQAIHTGKKPSGPSS   45 (46)
T ss_dssp             CCSSEETTTTEECSSHHHHHHHHTTSCCCCCCCSCC
T ss_pred             CCCeECCCCChhhCCHHHHHHHHHHhCCCCCCCCCC
Confidence            889999999999999999999999999999888864

>2epc_A Zinc finger protein 32; zinc finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2yta_A

Probab=98.56  E-value=1.6e-08  Score=68.26  Aligned_cols=34  Identities=18%  Similarity=0.424  Sum_probs=30.8

Q ss_pred             ccccccccccCccCCchhhHhhhhhhccCccccc
Q 015460           33 AKHFKCHVCHKKLSTAGGMAIHVLQVHKENVTKV   66 (406)
Q Consensus        33 EKPfkC~~CgksFss~s~LkrH~rthHgek~~~C   66 (406)
                      +++|+|.+|++.|.++++|++|+++|+++++|+|
T Consensus         9 ~~~~~C~~C~k~f~~~~~l~~H~~~H~~~k~~~C   42 (42)
T 2epc_A            9 ETPYLCGQCGKSFTQRGSLAVHQRSCSQSGPSSG   42 (42)
T ss_dssp             SCCEECSSSCCEESSHHHHHHHHHHTTCCCCCCC
T ss_pred             CCCeECCCCCcccCCHHHHHHHhhhcCCCCCCCC
Confidence            7899999999999999999999999999888877

>2emb_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.56  E-value=1.5e-08  Score=69.42  Aligned_cols=35  Identities=11%  Similarity=0.246  Sum_probs=32.0

Q ss_pred             ccccccccccCccCCchhhHhhhhhhccCcccccC
Q 015460           33 AKHFKCHVCHKKLSTAGGMAIHVLQVHKENVTKVP   67 (406)
Q Consensus        33 EKPfkC~~CgksFss~s~LkrH~rthHgek~~~Cp   67 (406)
                      +++|+|.+|++.|.+..+|++|+++|+++++|+|.
T Consensus        10 ~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (44)
T 2emb_A           10 RKRYECSKCQATFNLRKHLIQHQKTHAAKSGPSSG   44 (44)
T ss_dssp             CSSEECTTTCCEESCHHHHHHHGGGGCCCCCTTCC
T ss_pred             CCCeECCCCCCccCCHHHHHHHHHHcCCCCCcCCC
Confidence            88999999999999999999999999999988884

>2epx_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.55  E-value=2.6e-08  Score=68.83  Aligned_cols=36  Identities=17%  Similarity=0.240  Sum_probs=31.2

Q ss_pred             ccccccccccCccCCchhhHhhhh-hhccCcccccCC
Q 015460           33 AKHFKCHVCHKKLSTAGGMAIHVL-QVHKENVTKVPN   68 (406)
Q Consensus        33 EKPfkC~~CgksFss~s~LkrH~r-thHgek~~~Cp~   68 (406)
                      +|+|+|.+|++.|.++.+|++|++ .|+++++|+|..
T Consensus        10 ~k~~~C~~C~k~F~~~~~L~~H~~~~H~~~k~~~C~~   46 (47)
T 2epx_A           10 KKPYECIECGKAFIQNTSLIRHWRYYHTGEKPSGPSS   46 (47)
T ss_dssp             CCSBCCSSSCCCBSSHHHHHHHHTTTTTTSCSSSCCC
T ss_pred             CCCEECCccCchhCChHHHHHHhHhhcCCCCCCCCCC
Confidence            788999999999999999999998 888888887754

>2eox_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.55  E-value=8.1e-09  Score=70.77  Aligned_cols=35  Identities=14%  Similarity=0.267  Sum_probs=32.5

Q ss_pred             ccccccccccCccCCchhhHhhhhhhccCcccccC
Q 015460           33 AKHFKCHVCHKKLSTAGGMAIHVLQVHKENVTKVP   67 (406)
Q Consensus        33 EKPfkC~~CgksFss~s~LkrH~rthHgek~~~Cp   67 (406)
                      +++|+|.+|++.|.+..+|++|+++|+++++|.|.
T Consensus        10 ~~~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C~   44 (44)
T 2eox_A           10 SKSYNCNECGKAFTRIFHLTRHQKIHTRKSGPSSG   44 (44)
T ss_dssp             CCCEEETTTTEEESSSHHHHTTHHHHCCCCCCSCC
T ss_pred             CCCeECcccCcccCCHHHHHHHHHHhCCCCCCCCC
Confidence            89999999999999999999999999999988884

>2en2_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.55  E-value=1.5e-08  Score=68.61  Aligned_cols=34  Identities=21%  Similarity=0.408  Sum_probs=30.5

Q ss_pred             ccccccccccCccCCchhhHhhhhhhccCccccc
Q 015460           33 AKHFKCHVCHKKLSTAGGMAIHVLQVHKENVTKV   66 (406)
Q Consensus        33 EKPfkC~~CgksFss~s~LkrH~rthHgek~~~C   66 (406)
                      +|+|+|.+|++.|.+...|++|+++|+++++|.|
T Consensus         9 ~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   42 (42)
T 2en2_A            9 EKPYKCETCGARFVQVAHLRAHVLIHTGSGPSSG   42 (42)
T ss_dssp             SCSEECTTTCCEESSHHHHHHHTHHHHSCCSSCC
T ss_pred             CCCEeCCCcChhhCCHHHHHHHHHHcCCCCCCCC
Confidence            7899999999999999999999999988888876

>2eom_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.55  E-value=3.5e-08  Score=68.42  Aligned_cols=36  Identities=17%  Similarity=0.218  Sum_probs=32.3

Q ss_pred             ccccccccccCccCCchhhHhhhhhhccCcccccCC
Q 015460           33 AKHFKCHVCHKKLSTAGGMAIHVLQVHKENVTKVPN   68 (406)
Q Consensus        33 EKPfkC~~CgksFss~s~LkrH~rthHgek~~~Cp~   68 (406)
                      +|+|+|.+|++.|.++.+|++|+++|+++++|+|..
T Consensus        10 ~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2eom_A           10 ERGHRCSDCGKFFLQASNFIQHRRIHTGEKPSGPSS   45 (46)
T ss_dssp             CSSCCCSSSCCCCSSHHHHHHHHHHHSSCCCSSCCC
T ss_pred             CCCcCCCCCCCeeCChHHHHHHHHHhCCCCCCCCCC
Confidence            789999999999999999999999999999888864

>2j7j_A Transcription factor IIIA; zinc finger module, alternative initiation, nuclear protein, phosphorylation, hydrophobic core, zinc, RNA-binding; 1.65A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1un6_B 2hgh_A

Probab=98.55  E-value=3.8e-08  Score=75.61  Aligned_cols=51  Identities=27%  Similarity=0.429  Sum_probs=46.4

Q ss_pred             CCCccc-cCc--cCcccCChHHHHHHhh--cccccccc---ccCccCCchhhHhhhhhhc
Q 015460            8 VSSKVW-CYY--CDREFDDEKILVQHQK--AKHFKCHV---CHKKLSTAGGMAIHVLQVH   59 (406)
Q Consensus         8 ~gEKp~-C~~--CgK~Fs~ks~Lk~H~R--EKPfkC~~---CgksFss~s~LkrH~rthH   59 (406)
                      .+++++ |.+  |++.|.....|++|++  .. |+|.+   |++.|.+...|++|+++||
T Consensus        27 ~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~-~~C~~~~~C~~~f~~~~~l~~H~~~hh   85 (85)
T 2j7j_A           27 TQQLPYECPHEGCDKRFSLPSRLKRHEKVHAG-YPCKKDDSCSFVGKTWTLYLKHVAECH   85 (85)
T ss_dssp             HTTCCEECCSTTCCCEESSHHHHHHHHHHHHS-EECCSCSSCCCEESSHHHHHHHHHHCC
T ss_pred             CCCCCeeCCCCCCcCccCCHHHHHHHHHHhCC-CCCCCCCCCCCccCCHHHHHHHHHhcC
Confidence            367778 988  9999999999999999  33 99999   9999999999999998876

>2eou_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.54  E-value=2.5e-08  Score=68.40  Aligned_cols=35  Identities=14%  Similarity=0.138  Sum_probs=31.6

Q ss_pred             ccccccccccCccCCchhhHhhhhhhccCcccccC
Q 015460           33 AKHFKCHVCHKKLSTAGGMAIHVLQVHKENVTKVP   67 (406)
Q Consensus        33 EKPfkC~~CgksFss~s~LkrH~rthHgek~~~Cp   67 (406)
                      +++|+|.+|++.|.+..+|++|+++|+++++|+|.
T Consensus        10 ~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (44)
T 2eou_A           10 KTTSECQECGKIFRHSSLLIEHQALHAGESGPSSG   44 (44)
T ss_dssp             SCCCCCTTTCCCCSSHHHHHHHHHHHTTSCCCCCC
T ss_pred             CcCeECCCCCcccCCHHHHHHHHHHHCCCCCCCCC
Confidence            78999999999999999999999999999888884

>2eoy_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.54  E-value=2.2e-08  Score=69.33  Aligned_cols=35  Identities=23%  Similarity=0.339  Sum_probs=32.8

Q ss_pred             ccccccccccCccCCchhhHhhhhhhcc-CcccccC
Q 015460           33 AKHFKCHVCHKKLSTAGGMAIHVLQVHK-ENVTKVP   67 (406)
Q Consensus        33 EKPfkC~~CgksFss~s~LkrH~rthHg-ek~~~Cp   67 (406)
                      +|+|+|.+|++.|.+..+|++|+++|++ +++|.|.
T Consensus        10 ~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~~C~   45 (46)
T 2eoy_A           10 EKCFKCNKCEKTFSCSKYLTQHERIHTRGVKSGPSS   45 (46)
T ss_dssp             SCCEECSSSCCEESSSHHHHHHHTTCCSCCTTSSSC
T ss_pred             CCCEECcCCCCcCCCHHHHHHHHHHcCCCCCCCCCC
Confidence            8999999999999999999999999999 8988885

>2yrm_A B-cell lymphoma 6 protein; ZF-C2H2, zinc binding, DNA binding, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=98.53  E-value=3.8e-08  Score=67.36  Aligned_cols=35  Identities=23%  Similarity=0.459  Sum_probs=31.3

Q ss_pred             ccccccccccCccCCchhhHhhhhhhccCcccccC
Q 015460           33 AKHFKCHVCHKKLSTAGGMAIHVLQVHKENVTKVP   67 (406)
Q Consensus        33 EKPfkC~~CgksFss~s~LkrH~rthHgek~~~Cp   67 (406)
                      +|+|+|.+|++.|.++.+|++|+++|+++++|+|.
T Consensus         8 ~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   42 (43)
T 2yrm_A            8 NGAFFCNECDCRFSEEASLKRHTLQTHSDKSGPSS   42 (43)
T ss_dssp             SCCBCCSSSCCCBSSHHHHHHHHHHHTCTTCSSSC
T ss_pred             CCCEECCCCCCeeCChHHHHHHHHhhCCCCCccCC
Confidence            78899999999999999999999999988888885

>2epv_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.51  E-value=2.9e-08  Score=68.17  Aligned_cols=34  Identities=15%  Similarity=0.221  Sum_probs=31.4

Q ss_pred             ccccccccccCccCCchhhHhhhhhhccCccccc
Q 015460           33 AKHFKCHVCHKKLSTAGGMAIHVLQVHKENVTKV   66 (406)
Q Consensus        33 EKPfkC~~CgksFss~s~LkrH~rthHgek~~~C   66 (406)
                      +|+|+|.+|++.|.+.+.|++|+++|+++++|.|
T Consensus        10 ~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~~   43 (44)
T 2epv_A           10 EKPYECNECGKAFIWKSLLIVHERTHAGVSGPSS   43 (44)
T ss_dssp             CCSEECSSSCCEESSHHHHHHHHGGGSSCSCCCC
T ss_pred             CcCeECCCCCcccCchHHHHHHHhHhcCCCCCCC
Confidence            8899999999999999999999999999988876

>2ytt_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.51  E-value=3.7e-08  Score=68.16  Aligned_cols=36  Identities=19%  Similarity=0.384  Sum_probs=24.8

Q ss_pred             ccccccccccCccCCchhhHhhhhhhccCcccccCC
Q 015460           33 AKHFKCHVCHKKLSTAGGMAIHVLQVHKENVTKVPN   68 (406)
Q Consensus        33 EKPfkC~~CgksFss~s~LkrH~rthHgek~~~Cp~   68 (406)
                      +|+|+|.+|++.|.++.+|++|+++|+++++|.|..
T Consensus        10 ~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2ytt_A           10 EKPYQCSECGKSFSGSYRLTQHWITHTREKPSGPSS   45 (46)
T ss_dssp             CCTTCCSSSCCCCSSHHHHHHHHTHHHHCCCCSCCC
T ss_pred             CCCeeCCCCCcccCCHHHHHHHHHHcCCCCCCCCCC
Confidence            666777777777777777777777777666666643

>2ej4_A Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc binding, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=98.51  E-value=9.5e-08  Score=75.47  Aligned_cols=63  Identities=13%  Similarity=-0.026  Sum_probs=50.4

Q ss_pred             cccccccccCccCCchhhHhhhhh-hccCcccccCCCCCCCCccceeecCCCCCCHhHHHHHhhhccC
Q 015460           34 KHFKCHVCHKKLSTAGGMAIHVLQ-VHKENVTKVPNAKPGRESTDIEIYGMQGIPPDVLAAHYGEEEE  100 (406)
Q Consensus        34 KPfkC~~CgksFss~s~LkrH~rt-hHgek~~~Cp~~~~~r~s~~c~iCG~~fi~~~~L~~H~k~he~  100 (406)
                      ..|.|.+|++.|.+..+|++|+++ |.+++...+-.+    ..+.|.+||+.|.....|..|++.|.+
T Consensus        24 ~~~~C~~C~k~f~~~~~L~~H~~~~H~~~~~~~~~~c----~~~~C~~C~k~f~~~~~L~~H~~~H~~   87 (95)
T 2ej4_A           24 LSRPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVC----YWEECPREGKSFKAKYKLVNHIRVHTG   87 (95)
T ss_dssp             SSSSCCCCCCCCSSHHHHHHHHHHTTTCCTTCSCCCC----CCTTCSSTTCCCSSHHHHHHHHHHHHT
T ss_pred             CCCcccccccccCCHHHHHHHHHHhccCCCCCCccce----eccCCCCCCcccCCHHHHHHHHHhcCC
Confidence            357899999999999999999998 655543221111    237899999999999999999999976

>2epq_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.51  E-value=3.7e-08  Score=67.82  Aligned_cols=36  Identities=22%  Similarity=0.389  Sum_probs=27.1

Q ss_pred             ccccccccccCccCCchhhHhhhhhhccCcccccCC
Q 015460           33 AKHFKCHVCHKKLSTAGGMAIHVLQVHKENVTKVPN   68 (406)
Q Consensus        33 EKPfkC~~CgksFss~s~LkrH~rthHgek~~~Cp~   68 (406)
                      +|+|+|.+|++.|.++.+|++|+++|++++.|.|+.
T Consensus         8 ~k~~~C~~C~k~f~~~~~l~~H~~~H~~~~~~~C~~   43 (45)
T 2epq_A            8 EKPYSCPVCGLRFKRKDRMSYHVRSHDGSVGKSGPS   43 (45)
T ss_dssp             CCSSEETTTTEECSCHHHHHHHHHHHSCCCCCCCCC
T ss_pred             CCCCcCCCCCcccCCHHHHHHHHHHccCCCCCCCcC
Confidence            677777777777777777777877777777666654

>2elz_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.51  E-value=9.6e-08  Score=66.02  Aligned_cols=37  Identities=19%  Similarity=0.264  Sum_probs=33.6

Q ss_pred             ccCCCCccc-cCccCcccCChHHHHHHhh----ccccccccc
Q 015460            5 KKRVSSKVW-CYYCDREFDDEKILVQHQK----AKHFKCHVC   41 (406)
Q Consensus         5 kkr~gEKp~-C~~CgK~Fs~ks~Lk~H~R----EKPfkC~~C   41 (406)
                      +.+.++++| |.+|+|.|.++..|++|++    +++|+|.+|
T Consensus         5 ~~h~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2elz_A            5 SSGSVEKPYKCEDCGKGYNRRLNLDMHQRVHMGEKTSGPSSG   46 (46)
T ss_dssp             SCCCCCSSCBCSSSCCBCSSHHHHHHHGGGGGSCCCCCSCCC
T ss_pred             CCCCCCCCeeCcccCchhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            445688888 9999999999999999998    899999998

>2epu_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.50  E-value=3.2e-08  Score=68.14  Aligned_cols=35  Identities=23%  Similarity=0.402  Sum_probs=31.2

Q ss_pred             ccccccccccCccCCchhhHhhhhhhccCcccccC
Q 015460           33 AKHFKCHVCHKKLSTAGGMAIHVLQVHKENVTKVP   67 (406)
Q Consensus        33 EKPfkC~~CgksFss~s~LkrH~rthHgek~~~Cp   67 (406)
                      +|+|+|.+|++.|.++.+|++|+++|+++++|.|+
T Consensus        10 ~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~   44 (45)
T 2epu_A           10 QKPFECTHCGKSFRAKGNLVTHQRIHTGEKSGPSS   44 (45)
T ss_dssp             CCSEEETTTTEEESSHHHHHHHHTTTSSCCCCCSC
T ss_pred             CcCccCCCCCCccCChHHHHHHHHHhCCCCCCCCC
Confidence            78899999999999999999999999888888885

>2ep0_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.50  E-value=4.3e-08  Score=67.69  Aligned_cols=36  Identities=25%  Similarity=0.498  Sum_probs=27.5

Q ss_pred             ccccccccccCccCCchhhHhhhhhhccCcccccCC
Q 015460           33 AKHFKCHVCHKKLSTAGGMAIHVLQVHKENVTKVPN   68 (406)
Q Consensus        33 EKPfkC~~CgksFss~s~LkrH~rthHgek~~~Cp~   68 (406)
                      +|+|+|.+|++.|.++.+|++|+++|+++++|+|..
T Consensus        10 ~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2ep0_A           10 EKPYKCDVCHKSFRYGSSLTVHQRIHTGEKPSGPSS   45 (46)
T ss_dssp             CCSEECSSSCCEESSHHHHHHHHTTTSSSCCCSCCC
T ss_pred             CCCeeCcccCcccCChHHHHHHHHHhCCCCCCCCCC
Confidence            677788888888888888888877777777776654

>2ept_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.50  E-value=3.9e-08  Score=66.27  Aligned_cols=34  Identities=15%  Similarity=0.387  Sum_probs=29.7

Q ss_pred             ccccccccccCccCCchhhHhhhhhhccCccccc
Q 015460           33 AKHFKCHVCHKKLSTAGGMAIHVLQVHKENVTKV   66 (406)
Q Consensus        33 EKPfkC~~CgksFss~s~LkrH~rthHgek~~~C   66 (406)
                      +++|+|.+|++.|.+..+|++|+++|+++++|.|
T Consensus         8 ~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C   41 (41)
T 2ept_A            8 QRVYECQECGKSFRQKGSLTLHERIHTGSGPSSG   41 (41)
T ss_dssp             CCCEECSSSCCEESSHHHHHHHGGGCCCCSCSCC
T ss_pred             CCCeECCCCCCCcCCHHHHHHHHHHhCCCCCcCC
Confidence            7888999999999999999999888888888776

>2eps_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.48  E-value=5.6e-08  Score=70.00  Aligned_cols=43  Identities=16%  Similarity=0.274  Sum_probs=36.0

Q ss_pred             ccccccccccCccCCchhhHhhhh-hhccCcccccCCCCCCCCccceeecCCCCCC
Q 015460           33 AKHFKCHVCHKKLSTAGGMAIHVL-QVHKENVTKVPNAKPGRESTDIEIYGMQGIP   87 (406)
Q Consensus        33 EKPfkC~~CgksFss~s~LkrH~r-thHgek~~~Cp~~~~~r~s~~c~iCG~~fi~   87 (406)
                      +|+|+|.+|++.|.+...|++|++ .|+++++            |.|++|++.|..
T Consensus        10 ~k~~~C~~C~k~f~~~~~L~~H~~~~H~~~k~------------~~C~~C~k~F~~   53 (54)
T 2eps_A           10 GKPYICQSCGKGFSRPDHLNGHIKQVHTSERP------------HKCQVWVSGPSS   53 (54)
T ss_dssp             SCCEECSSSCCEESSHHHHHHHHHHTSCCCCC------------CCSSSSCCSSCC
T ss_pred             CCCeECCCCCcccCCHHHHHHHHHHhcCCCCC------------ccCCCCCCCCCC
Confidence            899999999999999999999997 7777665            455668887754

>2dlk_A Novel protein; ZF-C2H2 domain, zinc finger protein 692, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=98.48  E-value=5.8e-08  Score=74.13  Aligned_cols=56  Identities=14%  Similarity=0.118  Sum_probs=48.7

Q ss_pred             cccccccc--ccCccCCchhhHhhhh-hhccCcccccCCCCCCCCccceee--cCCCCCCHhHHHHHhhhccC
Q 015460           33 AKHFKCHV--CHKKLSTAGGMAIHVL-QVHKENVTKVPNAKPGRESTDIEI--YGMQGIPPDVLAAHYGEEEE  100 (406)
Q Consensus        33 EKPfkC~~--CgksFss~s~LkrH~r-thHgek~~~Cp~~~~~r~s~~c~i--CG~~fi~~~~L~~H~k~he~  100 (406)
                      +++|.|..  |++.|.+..+|++|++ .|.+++.            +.|.+  |++.|.....|.+|++.|.+
T Consensus         5 ~~~~~C~~~~C~~~f~~~~~L~~H~~~~H~~~~~------------~~C~~~~C~k~f~~~~~L~~H~~~H~~   65 (79)
T 2dlk_A            5 SSGMPCDFPGCGRIFSNRQYLNHHKKYQHIHQKS------------FSCPEPACGKSFNFKKHLKEHMKLHSD   65 (79)
T ss_dssp             CSSEECSSTTTCCEESSHHHHHHHHHHGGGSCCC------------EECSCTTTCCEESSHHHHHHHHHHHHT
T ss_pred             CCCccCCCCCCcCccCCHHHHHHHHHHHhCCCCC------------eECCCCCCcCccCCHHHHHHHHHHhCC
Confidence            68899997  9999999999999998 5766664            45566  99999999999999999876

>2ytq_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.48  E-value=1.1e-07  Score=65.80  Aligned_cols=36  Identities=19%  Similarity=0.371  Sum_probs=32.9

Q ss_pred             cCCCCccc-cCccCcccCChHHHHHHhh----ccccccccc
Q 015460            6 KRVSSKVW-CYYCDREFDDEKILVQHQK----AKHFKCHVC   41 (406)
Q Consensus         6 kr~gEKp~-C~~CgK~Fs~ks~Lk~H~R----EKPfkC~~C   41 (406)
                      .+.++++| |.+|+|.|.++..|++|++    +|+|+|.+|
T Consensus         6 ~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ytq_A            6 SGAGEKPYGCSECGKAFSSKSYLIIHMRTHSGEKPSGPSSG   46 (46)
T ss_dssp             CSSCCCSCBCSSSCCBCSCHHHHHHHHTTTCCSCSSCCCCC
T ss_pred             CcCCCCCcCCCccChhhCChHHHHHHHHHhCCCCCCCCCCC
Confidence            45578888 9999999999999999998    899999998

>2epr_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.46  E-value=5.6e-08  Score=68.10  Aligned_cols=38  Identities=21%  Similarity=0.301  Sum_probs=34.6

Q ss_pred             cCCCCccc-cCccCcccCChHHHHHHhh----ccccccccccC
Q 015460            6 KRVSSKVW-CYYCDREFDDEKILVQHQK----AKHFKCHVCHK   43 (406)
Q Consensus         6 kr~gEKp~-C~~CgK~Fs~ks~Lk~H~R----EKPfkC~~Cgk   43 (406)
                      .+.+++.| |.+|+|.|.+...|++|++    +|+|+|.+|+|
T Consensus         6 ~~~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C~k   48 (48)
T 2epr_A            6 SGRTRKQVACEICGKIFRDVYHLNRHKLSHSGEKPYSSGPSSG   48 (48)
T ss_dssp             CCCCCCSEEETTTTEEESSHHHHHHHGGGSCSCCCCCSCCCCC
T ss_pred             CCCCCcCeeCCCCCcccCCHHHHHHHHHhcCCCCCccCCCCCC
Confidence            44577888 9999999999999999998    89999999986

>2ytt_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.45  E-value=1.4e-07  Score=65.17  Aligned_cols=37  Identities=22%  Similarity=0.253  Sum_probs=33.4

Q ss_pred             ccCCCCccc-cCccCcccCChHHHHHHhh----ccccccccc
Q 015460            5 KKRVSSKVW-CYYCDREFDDEKILVQHQK----AKHFKCHVC   41 (406)
Q Consensus         5 kkr~gEKp~-C~~CgK~Fs~ks~Lk~H~R----EKPfkC~~C   41 (406)
                      ..+.++++| |.+|+|.|.++..|++|++    +|+|+|.+|
T Consensus         5 ~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ytt_A            5 SSGEGEKPYQCSECGKSFSGSYRLTQHWITHTREKPSGPSSG   46 (46)
T ss_dssp             SSCSCCCTTCCSSSCCCCSSHHHHHHHHTHHHHCCCCSCCCC
T ss_pred             CCCCCCCCeeCCCCCcccCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            345578888 9999999999999999998    899999998

>2ytm_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.45  E-value=1.4e-07  Score=65.37  Aligned_cols=37  Identities=22%  Similarity=0.389  Sum_probs=33.3

Q ss_pred             ccCCCCccc-cCccCcccCChHHHHHHhh----ccccccccc
Q 015460            5 KKRVSSKVW-CYYCDREFDDEKILVQHQK----AKHFKCHVC   41 (406)
Q Consensus         5 kkr~gEKp~-C~~CgK~Fs~ks~Lk~H~R----EKPfkC~~C   41 (406)
                      +.+.++++| |.+|+|.|.++..|++|++    +|+|+|.+|
T Consensus         5 ~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2ytm_A            5 SSGTGEKPYKCMECGKAFGDNSSCTQHQRLHTGQRPSGPSSG   46 (46)
T ss_dssp             CCCSSCCSSSBTTTTBCCSSHHHHHHHHHHHHSCCCCCCCCC
T ss_pred             cCCCCCCCcCCCCCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            345578888 9999999999999999998    899999988

>2ytn_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.45  E-value=1.3e-07  Score=65.18  Aligned_cols=36  Identities=19%  Similarity=0.330  Sum_probs=32.8

Q ss_pred             cCCCCccc-cCccCcccCChHHHHHHhh----ccccccccc
Q 015460            6 KRVSSKVW-CYYCDREFDDEKILVQHQK----AKHFKCHVC   41 (406)
Q Consensus         6 kr~gEKp~-C~~CgK~Fs~ks~Lk~H~R----EKPfkC~~C   41 (406)
                      .+.++++| |.+|+|.|.++..|++|++    +|+|+|.+|
T Consensus         6 ~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ytn_A            6 SGTGKKPYKCNECGKVFTQNSHLARHRGIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCSCCSSCBCTTTCCBCSSHHHHHHHGGGTSCCCCCSCCCC
T ss_pred             CCCCCcCeECCCCCCeeCCHHHHHHHhhhcCCCCCCCCCCC
Confidence            34578888 9999999999999999998    899999988

>2epz_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.45  E-value=1.3e-07  Score=65.16  Aligned_cols=36  Identities=25%  Similarity=0.368  Sum_probs=32.9

Q ss_pred             cCCCCccc-cCccCcccCChHHHHHHhh----ccccccccc
Q 015460            6 KRVSSKVW-CYYCDREFDDEKILVQHQK----AKHFKCHVC   41 (406)
Q Consensus         6 kr~gEKp~-C~~CgK~Fs~ks~Lk~H~R----EKPfkC~~C   41 (406)
                      .+.++++| |.+|+|.|.++..|++|++    +|+|+|.+|
T Consensus         6 ~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2epz_A            6 SGTGEKPFDCIDCGKAFSDHIGLNQHRRIHTGEKPSGPSSG   46 (46)
T ss_dssp             SCCCCCSBCCTTTCCCBSSHHHHHHHHTTTTTCCCCSSCCC
T ss_pred             CcCCCCCeECCCCCceeCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            44578888 9999999999999999998    899999988

>2em7_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.45  E-value=1.2e-07  Score=65.41  Aligned_cols=36  Identities=19%  Similarity=0.230  Sum_probs=32.8

Q ss_pred             cCCCCccc-cCccCcccCChHHHHHHhh----ccccccccc
Q 015460            6 KRVSSKVW-CYYCDREFDDEKILVQHQK----AKHFKCHVC   41 (406)
Q Consensus         6 kr~gEKp~-C~~CgK~Fs~ks~Lk~H~R----EKPfkC~~C   41 (406)
                      .+.++++| |.+|+|.|.++..|++|++    +|+|+|++|
T Consensus         6 ~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2em7_A            6 SGTGEKPYKCEECGKGFICRRDLYTHHMVHTGEKPSGPSSG   46 (46)
T ss_dssp             SSSCCCSEECSSSCCEESCHHHHHHHGGGGTTCCCSSTTCC
T ss_pred             CCCCCcCccCCCccchhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            34578888 9999999999999999998    899999998

>2em0_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens}

Probab=98.44  E-value=1.4e-07  Score=64.99  Aligned_cols=36  Identities=28%  Similarity=0.424  Sum_probs=32.8

Q ss_pred             cCCCCccc-cCccCcccCChHHHHHHhh----ccccccccc
Q 015460            6 KRVSSKVW-CYYCDREFDDEKILVQHQK----AKHFKCHVC   41 (406)
Q Consensus         6 kr~gEKp~-C~~CgK~Fs~ks~Lk~H~R----EKPfkC~~C   41 (406)
                      .+.++++| |++|+|.|.++..|++|++    +++|+|.+|
T Consensus         6 ~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2em0_A            6 SGMGEKTWKCRECDMCFSQASSLRLHQNVHVGEKPSGPSSG   46 (46)
T ss_dssp             CSCCCCCCCCSSSCCCCSSHHHHHHHGGGGSSSSCSCSSCC
T ss_pred             ccCCCcCeECCCCCcccCCHHHHHHHHHHcCCCCCcCCCCC
Confidence            34578888 9999999999999999998    899999988

>2eq4_A Zinc finger protein 224; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.44  E-value=1.4e-07  Score=64.97  Aligned_cols=36  Identities=19%  Similarity=0.419  Sum_probs=32.8

Q ss_pred             cCCCCccc-cCccCcccCChHHHHHHhh----ccccccccc
Q 015460            6 KRVSSKVW-CYYCDREFDDEKILVQHQK----AKHFKCHVC   41 (406)
Q Consensus         6 kr~gEKp~-C~~CgK~Fs~ks~Lk~H~R----EKPfkC~~C   41 (406)
                      .+.++++| |.+|+|.|.++..|++|++    +++|+|.+|
T Consensus         6 ~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2eq4_A            6 SGTGEKLYNCKECGKSFSRAPCLLKHERLHSGEKPSGPSSG   46 (46)
T ss_dssp             CSSCCCCCCBTTTTBCCSCHHHHHHHHHHCCSSSCCCCCCC
T ss_pred             cCCCCCCeECCCCCCccCchHHHHHHHHhcCCCCCCCCCCC
Confidence            34578888 9999999999999999998    899999988

>2epq_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.44  E-value=1.1e-07  Score=65.38  Aligned_cols=37  Identities=14%  Similarity=0.219  Sum_probs=33.7

Q ss_pred             cCCCCccc-cCccCcccCChHHHHHHhh----cccccccccc
Q 015460            6 KRVSSKVW-CYYCDREFDDEKILVQHQK----AKHFKCHVCH   42 (406)
Q Consensus         6 kr~gEKp~-C~~CgK~Fs~ks~Lk~H~R----EKPfkC~~Cg   42 (406)
                      .+.++++| |.+|+|.|.++..|++|++    +++|.|.+||
T Consensus         4 ~h~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~~~~~C~~cg   45 (45)
T 2epq_A            4 GSSGEKPYSCPVCGLRFKRKDRMSYHVRSHDGSVGKSGPSSG   45 (45)
T ss_dssp             CCSSCCSSEETTTTEECSCHHHHHHHHHHHSCCCCCCCCCCC
T ss_pred             CcCCCCCCcCCCCCcccCCHHHHHHHHHHccCCCCCCCcCCC
Confidence            34578888 9999999999999999998    9999999996

>2emk_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ysv_A

Probab=98.43  E-value=1.5e-07  Score=65.08  Aligned_cols=36  Identities=25%  Similarity=0.422  Sum_probs=32.8

Q ss_pred             cCCCCccc-cCccCcccCChHHHHHHhh----ccccccccc
Q 015460            6 KRVSSKVW-CYYCDREFDDEKILVQHQK----AKHFKCHVC   41 (406)
Q Consensus         6 kr~gEKp~-C~~CgK~Fs~ks~Lk~H~R----EKPfkC~~C   41 (406)
                      .+.++++| |.+|+|.|.++..|++|++    +|+|+|.+|
T Consensus         6 ~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2emk_A            6 SGTGEKPYECKECGKAFSQTTHLIQHQRVHTGEKPSGPSSG   46 (46)
T ss_dssp             CCSSSCSCBCSSSCCBCSCHHHHHHHHHHHSSCCCSSCCCC
T ss_pred             ccCCCCceECCCCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            34578888 9999999999999999998    899999988

>2ely_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ena_A 2en4_A

Probab=98.43  E-value=1.3e-07  Score=65.33  Aligned_cols=36  Identities=22%  Similarity=0.329  Sum_probs=32.8

Q ss_pred             cCCCCccc-cCccCcccCChHHHHHHhh----ccccccccc
Q 015460            6 KRVSSKVW-CYYCDREFDDEKILVQHQK----AKHFKCHVC   41 (406)
Q Consensus         6 kr~gEKp~-C~~CgK~Fs~ks~Lk~H~R----EKPfkC~~C   41 (406)
                      .+.++++| |.+|+|.|.++..|++|++    +|+|+|.+|
T Consensus         6 ~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ely_A            6 SGTGEKPFKCVECGKGFSRRSALNVHHKLHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCCSBCCSSSCCCBSSTTHHHHHHHHHSCCSSCSCCCC
T ss_pred             CCCCCCCcccCccCcccCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            34578888 9999999999999999998    899999998

>2el4_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eog_A 2em1_A 2emw_A 2eok_A

Probab=98.43  E-value=1.4e-07  Score=64.96  Aligned_cols=36  Identities=22%  Similarity=0.350  Sum_probs=32.9

Q ss_pred             cCCCCccc-cCccCcccCChHHHHHHhh----ccccccccc
Q 015460            6 KRVSSKVW-CYYCDREFDDEKILVQHQK----AKHFKCHVC   41 (406)
Q Consensus         6 kr~gEKp~-C~~CgK~Fs~ks~Lk~H~R----EKPfkC~~C   41 (406)
                      .+.++++| |.+|||.|.++..|++|++    +++|+|.+|
T Consensus         6 ~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2el4_A            6 SGTGVKPYGCSQCAKTFSLKSQLIVHQRSHTGVKPSGPSSG   46 (46)
T ss_dssp             CSCCCCSEECSSSSCEESSHHHHHHHGGGSSSCCCSCCTTC
T ss_pred             CCCCCCceECCCCCchhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            34578888 9999999999999999998    899999988

>2ene_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.43  E-value=1.3e-07  Score=65.23  Aligned_cols=36  Identities=22%  Similarity=0.374  Sum_probs=32.8

Q ss_pred             cCCCCccc-cCccCcccCChHHHHHHhh----ccccccccc
Q 015460            6 KRVSSKVW-CYYCDREFDDEKILVQHQK----AKHFKCHVC   41 (406)
Q Consensus         6 kr~gEKp~-C~~CgK~Fs~ks~Lk~H~R----EKPfkC~~C   41 (406)
                      .+.++++| |.+|||.|.+++.|++|++    +|+|+|.+|
T Consensus         6 ~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ene_A            6 SGTGEKPYKCNECGKVFRHNSYLSRHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             SCCCSSSEECSSSCCEESSHHHHHHHHTTTCCCCCCSCCCC
T ss_pred             CCCCCCCeECCCCCchhCChHHHHHHHhhcCCCCCCCCCCC
Confidence            34578888 9999999999999999998    899999998

>2enc_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.43  E-value=1.3e-07  Score=65.19  Aligned_cols=36  Identities=19%  Similarity=0.256  Sum_probs=32.9

Q ss_pred             cCCCCccc-cCccCcccCChHHHHHHhh----ccccccccc
Q 015460            6 KRVSSKVW-CYYCDREFDDEKILVQHQK----AKHFKCHVC   41 (406)
Q Consensus         6 kr~gEKp~-C~~CgK~Fs~ks~Lk~H~R----EKPfkC~~C   41 (406)
                      .+.++++| |.+|+|.|.++..|++|++    +++|+|++|
T Consensus         6 ~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2enc_A            6 SGSGEKPFKCEECGKGFYTNSQCYSHQRSHSGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCCSEECSSSCCEESSHHHHHHHHHHSCCSSCCSSCCC
T ss_pred             CCCCCCCcCCCCCCCcCCChHHHHHHHHHhCCCCCCCCCCC
Confidence            44578888 9999999999999999998    899999998

>2eop_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.43  E-value=1.6e-07  Score=64.68  Aligned_cols=36  Identities=19%  Similarity=0.283  Sum_probs=32.8

Q ss_pred             cCCCCccc-cCccCcccCChHHHHHHhh----ccccccccc
Q 015460            6 KRVSSKVW-CYYCDREFDDEKILVQHQK----AKHFKCHVC   41 (406)
Q Consensus         6 kr~gEKp~-C~~CgK~Fs~ks~Lk~H~R----EKPfkC~~C   41 (406)
                      .+.++++| |.+|+|.|.++..|++|++    +++|+|.+|
T Consensus         6 ~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2eop_A            6 SGTGEKPHECRECGKSFSFNSQLIVHQRIHTGENPSGPSSG   46 (46)
T ss_dssp             SCCCCCSCBCTTTCCBCSSHHHHHHHHTTTTTSCCSCCCCC
T ss_pred             ccCCCCCeeCCCCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            34578888 9999999999999999998    899999988

>2ep0_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.43  E-value=1.5e-07  Score=64.96  Aligned_cols=37  Identities=22%  Similarity=0.316  Sum_probs=33.5

Q ss_pred             ccCCCCccc-cCccCcccCChHHHHHHhh----ccccccccc
Q 015460            5 KKRVSSKVW-CYYCDREFDDEKILVQHQK----AKHFKCHVC   41 (406)
Q Consensus         5 kkr~gEKp~-C~~CgK~Fs~ks~Lk~H~R----EKPfkC~~C   41 (406)
                      +.+.++++| |.+|+|.|.++..|++|++    +|+|+|.+|
T Consensus         5 ~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ep0_A            5 SSGTGEKPYKCDVCHKSFRYGSSLTVHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CSSTTCCSEECSSSCCEESSHHHHHHHHTTTSSSCCCSCCCC
T ss_pred             CCCCCCCCeeCcccCcccCChHHHHHHHHHhCCCCCCCCCCC
Confidence            445688888 9999999999999999998    899999988

>2eq0_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.43  E-value=1.3e-07  Score=65.25  Aligned_cols=36  Identities=22%  Similarity=0.312  Sum_probs=32.9

Q ss_pred             cCCCCccc-cCccCcccCChHHHHHHhh----ccccccccc
Q 015460            6 KRVSSKVW-CYYCDREFDDEKILVQHQK----AKHFKCHVC   41 (406)
Q Consensus         6 kr~gEKp~-C~~CgK~Fs~ks~Lk~H~R----EKPfkC~~C   41 (406)
                      .+.++++| |.+|+|.|.++..|++|++    +|+|+|.+|
T Consensus         6 ~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2eq0_A            6 SGTGEKPYKCHECGKVFRRNSHLARHQLIHTGEKPSGPSSG   46 (46)
T ss_dssp             CTTCCCCEECTTTCCEESSHHHHHHHHTTTCCCCCSCCSCC
T ss_pred             CCCCCCCeECCCCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            34578888 9999999999999999998    899999988

>2emf_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.43  E-value=1.4e-07  Score=65.25  Aligned_cols=36  Identities=25%  Similarity=0.363  Sum_probs=32.7

Q ss_pred             cCCCCccc-cCccCcccCChHHHHHHhh----ccccccccc
Q 015460            6 KRVSSKVW-CYYCDREFDDEKILVQHQK----AKHFKCHVC   41 (406)
Q Consensus         6 kr~gEKp~-C~~CgK~Fs~ks~Lk~H~R----EKPfkC~~C   41 (406)
                      .+.++++| |.+|||.|.++..|++|++    +|+|+|.+|
T Consensus         6 ~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2emf_A            6 SGTGGKHFECTECGKAFTRKSTLSMHQKIHTGEKPSGPSSG   46 (46)
T ss_dssp             SSSSSCCEECSSSCCEESCHHHHHHHGGGTSCSSCSCCCCC
T ss_pred             ccCCCCCeECCCCCchhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            34578888 9999999999999999998    899999988

>2emm_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.43  E-value=1.3e-07  Score=65.03  Aligned_cols=36  Identities=22%  Similarity=0.339  Sum_probs=32.8

Q ss_pred             cCCCCccc-cCccCcccCChHHHHHHhh----ccccccccc
Q 015460            6 KRVSSKVW-CYYCDREFDDEKILVQHQK----AKHFKCHVC   41 (406)
Q Consensus         6 kr~gEKp~-C~~CgK~Fs~ks~Lk~H~R----EKPfkC~~C   41 (406)
                      .+.++++| |.+|+|.|.++..|++|++    +|+|+|.+|
T Consensus         6 ~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2emm_A            6 SGTGERPHKCNECGKSFIQSAHLIQHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CSSCCCSEECSSSCCEESSHHHHHHHHHHHSCCCTTSSSCC
T ss_pred             CcCCCCCeeCCCCChhhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            34578888 9999999999999999998    899999998

>2emx_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.42  E-value=1.3e-07  Score=64.62  Aligned_cols=35  Identities=23%  Similarity=0.433  Sum_probs=32.3

Q ss_pred             CCCCccc-cCccCcccCChHHHHHHhh----ccccccccc
Q 015460            7 RVSSKVW-CYYCDREFDDEKILVQHQK----AKHFKCHVC   41 (406)
Q Consensus         7 r~gEKp~-C~~CgK~Fs~ks~Lk~H~R----EKPfkC~~C   41 (406)
                      +.++++| |.+|||.|.++..|++|++    +|+|+|.+|
T Consensus         5 H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   44 (44)
T 2emx_A            5 SSGEKPFGCSCCEKAFSSKSYLLVHQQTHAEEKPSGPSSG   44 (44)
T ss_dssp             CSSCCCEECSSSSCEESSHHHHHHHHHHHTSSCSCSCCCC
T ss_pred             cCCCcCccCCCCCcccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            4578888 9999999999999999998    899999988

>2ytr_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.42  E-value=1.6e-07  Score=64.66  Aligned_cols=36  Identities=22%  Similarity=0.391  Sum_probs=32.8

Q ss_pred             cCCCCccc-cCccCcccCChHHHHHHhh----ccccccccc
Q 015460            6 KRVSSKVW-CYYCDREFDDEKILVQHQK----AKHFKCHVC   41 (406)
Q Consensus         6 kr~gEKp~-C~~CgK~Fs~ks~Lk~H~R----EKPfkC~~C   41 (406)
                      .+.++++| |.+|||.|.++..|++|++    +++|+|.+|
T Consensus         6 ~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2ytr_A            6 SGTGEKPYKCNECGKAFSQTSKLARHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCSSCCTTCCTTTCCCCSSHHHHHHHHTTTTTCSCCCSCCC
T ss_pred             CCCCCcCcCCCCCCCccCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            34578888 9999999999999999998    899999998

>2eml_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.42  E-value=1.4e-07  Score=65.05  Aligned_cols=36  Identities=22%  Similarity=0.375  Sum_probs=32.8

Q ss_pred             cCCCCccc-cCccCcccCChHHHHHHhh----ccccccccc
Q 015460            6 KRVSSKVW-CYYCDREFDDEKILVQHQK----AKHFKCHVC   41 (406)
Q Consensus         6 kr~gEKp~-C~~CgK~Fs~ks~Lk~H~R----EKPfkC~~C   41 (406)
                      .+.++++| |.+|||.|..+..|++|++    +++|+|.+|
T Consensus         6 ~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2eml_A            6 SGTGEKPYECSVCGKAFSHRQSLSVHQRIHSGKKPSGPSSG   46 (46)
T ss_dssp             CCSSCCSEECSSSCCEESSHHHHHHHHGGGSSCCCSCSSCC
T ss_pred             CcCCCCCeeCCCcCCccCCHHHHHHHHHHhcCCCCCCCCCC
Confidence            34578888 9999999999999999998    899999988

>2eoe_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.42  E-value=1.5e-07  Score=64.84  Aligned_cols=36  Identities=22%  Similarity=0.371  Sum_probs=32.8

Q ss_pred             cCCCCccc-cCccCcccCChHHHHHHhh----ccccccccc
Q 015460            6 KRVSSKVW-CYYCDREFDDEKILVQHQK----AKHFKCHVC   41 (406)
Q Consensus         6 kr~gEKp~-C~~CgK~Fs~ks~Lk~H~R----EKPfkC~~C   41 (406)
                      .+.++++| |.+|+|.|.++..|++|++    +++|+|.+|
T Consensus         6 ~H~~~~~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2eoe_A            6 SGTGEKPYKCNECGKVFTQNSHLANHQRIHTGVKPSGPSSG   46 (46)
T ss_dssp             CCCCCCSSEETTTTEECSSHHHHHHHHGGGSCCCSCSSCCC
T ss_pred             CCCCCCCeECCCcChhhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            34578888 9999999999999999998    899999998

>2ema_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2emc_A

Probab=98.42  E-value=1.4e-07  Score=65.02  Aligned_cols=36  Identities=28%  Similarity=0.377  Sum_probs=32.8

Q ss_pred             cCCCCccc-cCccCcccCChHHHHHHhh----ccccccccc
Q 015460            6 KRVSSKVW-CYYCDREFDDEKILVQHQK----AKHFKCHVC   41 (406)
Q Consensus         6 kr~gEKp~-C~~CgK~Fs~ks~Lk~H~R----EKPfkC~~C   41 (406)
                      .+.++++| |.+|+|.|.++..|++|++    +|+|+|++|
T Consensus         6 ~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2ema_A            6 SGTGEKRYKCNECGKVFSRNSQLSQHQKIHTGEKPSGPSSG   46 (46)
T ss_dssp             SCTTSCCEECSSSCCEESSHHHHHHHHTGGGCCCCCSSSCC
T ss_pred             CCCCCcCcCCCCCcchhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            34578888 9999999999999999998    899999988

>2emh_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.42  E-value=1.4e-07  Score=65.02  Aligned_cols=36  Identities=25%  Similarity=0.457  Sum_probs=32.7

Q ss_pred             cCCCCccc-cCccCcccCChHHHHHHhh----ccccccccc
Q 015460            6 KRVSSKVW-CYYCDREFDDEKILVQHQK----AKHFKCHVC   41 (406)
Q Consensus         6 kr~gEKp~-C~~CgK~Fs~ks~Lk~H~R----EKPfkC~~C   41 (406)
                      .+.++++| |.+|+|.|.++..|++|++    +++|+|.+|
T Consensus         6 ~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2emh_A            6 SGTGERPYICTVCGKAFTDRSNLIKHQKIHTGEKPSGPSSG   46 (46)
T ss_dssp             SCSCCCSEECTTTCCEESSHHHHHHHHHHHHCSSCSSSCCC
T ss_pred             CCCCCCCcCCCCCCchhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            34578888 9999999999999999998    899999988

>2emp_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.41  E-value=1.5e-07  Score=64.86  Aligned_cols=36  Identities=22%  Similarity=0.268  Sum_probs=32.8

Q ss_pred             cCCCCccc-cCccCcccCChHHHHHHhh----ccccccccc
Q 015460            6 KRVSSKVW-CYYCDREFDDEKILVQHQK----AKHFKCHVC   41 (406)
Q Consensus         6 kr~gEKp~-C~~CgK~Fs~ks~Lk~H~R----EKPfkC~~C   41 (406)
                      .+.++++| |.+|||.|.++..|++|++    +++|+|.+|
T Consensus         6 ~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2emp_A            6 SGTGVKPYMCNECGKAFSVYSSLTTHQVIHTGEKPSGPSSG   46 (46)
T ss_dssp             CSSCCCSEECSSSCCEESCHHHHHHHHHHHHCCSCCSCCCC
T ss_pred             ccCCCcCeECCCCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            34578888 9999999999999999998    899999988

>2eov_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.41  E-value=1.8e-07  Score=64.42  Aligned_cols=35  Identities=26%  Similarity=0.359  Sum_probs=32.2

Q ss_pred             CCCCccc-cCccCcccCChHHHHHHhh----ccccccccc
Q 015460            7 RVSSKVW-CYYCDREFDDEKILVQHQK----AKHFKCHVC   41 (406)
Q Consensus         7 r~gEKp~-C~~CgK~Fs~ks~Lk~H~R----EKPfkC~~C   41 (406)
                      +.++++| |.+|||.|.++..|++|++    +++|+|.+|
T Consensus         7 H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2eov_A            7 GTGEKPYKCSDCGKSFTWKSRLRIHQKCHTGERHSGPSSG   46 (46)
T ss_dssp             CSSCCSCBCSSSCCBCSSHHHHHHHHHHHSCCSSCCSCCC
T ss_pred             CCCCCCccCCccChhhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            4578888 9999999999999999998    899999988

>2el6_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens}

Probab=98.41  E-value=1.8e-07  Score=64.59  Aligned_cols=36  Identities=19%  Similarity=0.359  Sum_probs=32.9

Q ss_pred             cCCCCccc-cCccCcccCChHHHHHHhh----ccccccccc
Q 015460            6 KRVSSKVW-CYYCDREFDDEKILVQHQK----AKHFKCHVC   41 (406)
Q Consensus         6 kr~gEKp~-C~~CgK~Fs~ks~Lk~H~R----EKPfkC~~C   41 (406)
                      .+.++++| |.+|+|.|.++..|++|++    +|+|+|.+|
T Consensus         6 ~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2el6_A            6 SGAGVNPYKCSQCEKSFSGKLRLLVHQRMHTREKPSGPSSG   46 (46)
T ss_dssp             SSCCCCSEECSSSSCEESSHHHHHHHHGGGCCSSCCSCCCC
T ss_pred             CCCCCCCeECCCCCcccCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            34578888 9999999999999999998    899999988

>2yso_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.41  E-value=1.5e-07  Score=64.94  Aligned_cols=36  Identities=22%  Similarity=0.213  Sum_probs=32.8

Q ss_pred             cCCCCccc-cCccCcccCChHHHHHHhh----ccccccccc
Q 015460            6 KRVSSKVW-CYYCDREFDDEKILVQHQK----AKHFKCHVC   41 (406)
Q Consensus         6 kr~gEKp~-C~~CgK~Fs~ks~Lk~H~R----EKPfkC~~C   41 (406)
                      .+.++++| |.+|||.|.++..|++|++    +|+|+|.+|
T Consensus         6 ~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2yso_A            6 SGSREKSHQCRECGEIFFQYVSLIEHQVLHMGQKNSGPSSG   46 (46)
T ss_dssp             CSSCCCCEECTTTCCEESSHHHHHHHHHHHSCCSCCCTTCC
T ss_pred             ccCCCCCEEccccChhhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            44578888 9999999999999999998    899999988

>2em9_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2yrh_A

Probab=98.41  E-value=1.6e-07  Score=64.63  Aligned_cols=36  Identities=22%  Similarity=0.349  Sum_probs=32.8

Q ss_pred             cCCCCccc-cCccCcccCChHHHHHHhh----ccccccccc
Q 015460            6 KRVSSKVW-CYYCDREFDDEKILVQHQK----AKHFKCHVC   41 (406)
Q Consensus         6 kr~gEKp~-C~~CgK~Fs~ks~Lk~H~R----EKPfkC~~C   41 (406)
                      .+.++++| |.+|+|.|.++..|++|++    +|+|+|.+|
T Consensus         6 ~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2em9_A            6 SGTGEKPYNCKECGKSFRWASCLLKHQRVHSGEKPSGPSSG   46 (46)
T ss_dssp             SCCCCCSEECSSSCCEESSHHHHHHHGGGGTSCCCCSTTCC
T ss_pred             CCCCCcCeECCccccccCChHHHHHHHHHhCCCCCCCCCCC
Confidence            34578888 9999999999999999998    899999988

>2em8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.41  E-value=1.7e-07  Score=64.80  Aligned_cols=37  Identities=19%  Similarity=0.239  Sum_probs=33.3

Q ss_pred             ccCCCCccc-cCccCcccCChHHHHHHhh----ccccccccc
Q 015460            5 KKRVSSKVW-CYYCDREFDDEKILVQHQK----AKHFKCHVC   41 (406)
Q Consensus         5 kkr~gEKp~-C~~CgK~Fs~ks~Lk~H~R----EKPfkC~~C   41 (406)
                      +.+.++++| |.+|+|.|.++..|++|++    +|+|+|.+|
T Consensus         5 ~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2em8_A            5 SSGSGEKPYKCVECGKGYKRRLDLDFHQRVHTGEKLSGPSSG   46 (46)
T ss_dssp             CCCCSCCSEECSSSCCEESSHHHHHHHHHHHHCCCCCCSCCC
T ss_pred             CCCCCCCCeECcccCchhCCHHHHHHHHHHHcCCCCCCCCCC
Confidence            345578888 9999999999999999998    899999998

>2yu8_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.41  E-value=1.4e-07  Score=65.10  Aligned_cols=36  Identities=19%  Similarity=0.371  Sum_probs=32.9

Q ss_pred             cCCCCccc-cCccCcccCChHHHHHHhh----ccccccccc
Q 015460            6 KRVSSKVW-CYYCDREFDDEKILVQHQK----AKHFKCHVC   41 (406)
Q Consensus         6 kr~gEKp~-C~~CgK~Fs~ks~Lk~H~R----EKPfkC~~C   41 (406)
                      .+.++++| |.+|+|.|.++..|++|++    +++|+|.+|
T Consensus         6 ~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2yu8_A            6 SGTGEKPYKCNECGKVFTQNSHLARHRRVHTGGKPSGPSSG   46 (46)
T ss_dssp             CCCCCSSEECSSSCCEESSSHHHHHHTHHHHSCCCSCSCCC
T ss_pred             CCCCCCCeECCcCCchhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            34578888 9999999999999999998    899999988

>1rim_A E6APC2 peptide; E6-binding domain, zinc finger, human papillomavirus, HPV E6 protein, de novo protein; NMR {Synthetic} SCOP: k.12.1.1

Probab=98.41  E-value=1.1e-07  Score=61.47  Aligned_cols=32  Identities=16%  Similarity=0.342  Sum_probs=29.4

Q ss_pred             cccccccccCccCCchhhHhhhhhhccCcccc
Q 015460           34 KHFKCHVCHKKLSTAGGMAIHVLQVHKENVTK   65 (406)
Q Consensus        34 KPfkC~~CgksFss~s~LkrH~rthHgek~~~   65 (406)
                      |+|+|.+|++.|.+.++|.+|+++|+++++|.
T Consensus         1 kp~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~   32 (33)
T 1rim_A            1 YKFACPECPKRFMRSDHLSKHITLHELLGEER   32 (33)
T ss_dssp             CCCCCSSSCCCCSSHHHHHHHHHHHTTTCCCC
T ss_pred             CcccCCCCCchhCCHHHHHHHHHHhCCCCCCC
Confidence            68999999999999999999999999988764

>2emy_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.41  E-value=1.5e-07  Score=64.83  Aligned_cols=36  Identities=19%  Similarity=0.360  Sum_probs=32.7

Q ss_pred             cCCCCccc-cCccCcccCChHHHHHHhh----ccccccccc
Q 015460            6 KRVSSKVW-CYYCDREFDDEKILVQHQK----AKHFKCHVC   41 (406)
Q Consensus         6 kr~gEKp~-C~~CgK~Fs~ks~Lk~H~R----EKPfkC~~C   41 (406)
                      .+.++++| |.+|||.|.++..|++|++    +++|+|.+|
T Consensus         6 ~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2emy_A            6 SGTGENPYECHECGKAFSRKYQLISHQRTHAGEKPSGPSSG   46 (46)
T ss_dssp             CCCSSCCEECSSSCCEESSHHHHHHHHHHHTTSCCSCSSCC
T ss_pred             CCCCCcCcCCCCCCcccCcHHHHHHHHHHcCCCCCCCCCCC
Confidence            34578888 9999999999999999998    899999988

>2ytd_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.40  E-value=1.7e-07  Score=64.68  Aligned_cols=36  Identities=17%  Similarity=0.314  Sum_probs=32.8

Q ss_pred             cCCCCccc-cCccCcccCChHHHHHHhh----ccccccccc
Q 015460            6 KRVSSKVW-CYYCDREFDDEKILVQHQK----AKHFKCHVC   41 (406)
Q Consensus         6 kr~gEKp~-C~~CgK~Fs~ks~Lk~H~R----EKPfkC~~C   41 (406)
                      .+.++++| |.+|+|.|.++..|++|++    +|+|+|.+|
T Consensus         6 ~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2ytd_A            6 SGSGEKPYKCSECGKAFHRHTHLNEHRRIHTGYRPSGPSSG   46 (46)
T ss_dssp             CSCCCCSEECSSSCCEESSHHHHHHHHHHHTCCCSSCSSCC
T ss_pred             ccCCCcCeECCCCCCeeCChHHHHHHHHHcCCCCCCCCCCC
Confidence            34578888 9999999999999999998    899999988

>2eoo_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.40  E-value=1.6e-07  Score=64.86  Aligned_cols=36  Identities=19%  Similarity=0.377  Sum_probs=32.8

Q ss_pred             cCCCCccc-cCccCcccCChHHHHHHhh----ccccccccc
Q 015460            6 KRVSSKVW-CYYCDREFDDEKILVQHQK----AKHFKCHVC   41 (406)
Q Consensus         6 kr~gEKp~-C~~CgK~Fs~ks~Lk~H~R----EKPfkC~~C   41 (406)
                      .+.++++| |.+|||.|.+.+.|++|++    +++|+|.+|
T Consensus         6 ~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2eoo_A            6 SGSGERPYGCNECGKNFGRHSHLIEHLKRHFREKSSGPSSG   46 (46)
T ss_dssp             CCSCCCCEECSSSCCEESSHHHHHHHHHHHHSTTSSCCSCC
T ss_pred             CCCCCCCEEccccCcccCCHHHHHHHHHHHcCCCCCCCCCC
Confidence            34578888 9999999999999999998    899999988

>2eoq_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.40  E-value=1.9e-07  Score=64.40  Aligned_cols=35  Identities=20%  Similarity=0.279  Sum_probs=32.3

Q ss_pred             CCCCccc-cCccCcccCChHHHHHHhh----ccccccccc
Q 015460            7 RVSSKVW-CYYCDREFDDEKILVQHQK----AKHFKCHVC   41 (406)
Q Consensus         7 r~gEKp~-C~~CgK~Fs~ks~Lk~H~R----EKPfkC~~C   41 (406)
                      +.++++| |.+|+|.|.++..|++|++    +++|+|.+|
T Consensus         7 H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2eoq_A            7 GTGEKPFKCDICGKSFCGRSRLNRHSMVHTAEKPSGPSSG   46 (46)
T ss_dssp             SSSSCSCCCSSSCCCCSSHHHHHHHHHHTTCCCSSSCCCC
T ss_pred             CCCCCCcCCCcCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            4578888 9999999999999999988    899999988

>2ysp_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.40  E-value=1.4e-07  Score=65.04  Aligned_cols=36  Identities=19%  Similarity=0.295  Sum_probs=32.9

Q ss_pred             cCCCCccc-cCccCcccCChHHHHHHhh----ccccccccc
Q 015460            6 KRVSSKVW-CYYCDREFDDEKILVQHQK----AKHFKCHVC   41 (406)
Q Consensus         6 kr~gEKp~-C~~CgK~Fs~ks~Lk~H~R----EKPfkC~~C   41 (406)
                      .+.++++| |.+|+|.|.++..|++|++    +|+|+|.+|
T Consensus         6 ~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2ysp_A            6 SGTGEKPYKCEKCGKGYNSKFNLDMHQKVHTGERPSGPSSG   46 (46)
T ss_dssp             CCSSCCSEEETTTTEEESCHHHHHHHHTTSCSCCSSCCSCC
T ss_pred             CCCCCCCeECCCCCCccCCHHHHHHHHHhhCCCCCCCCCCC
Confidence            44578888 9999999999999999998    899999998

>2ep2_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.40  E-value=1.7e-07  Score=64.62  Aligned_cols=36  Identities=22%  Similarity=0.354  Sum_probs=32.8

Q ss_pred             cCCCCccc-cCccCcccCChHHHHHHhh----ccccccccc
Q 015460            6 KRVSSKVW-CYYCDREFDDEKILVQHQK----AKHFKCHVC   41 (406)
Q Consensus         6 kr~gEKp~-C~~CgK~Fs~ks~Lk~H~R----EKPfkC~~C   41 (406)
                      .+.++++| |.+|+|.|.++..|++|++    +++|+|++|
T Consensus         6 ~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2ep2_A            6 SGTGEKPYECSICGKSFTKKSQLHVHQQIHTGEKPSGPSSG   46 (46)
T ss_dssp             CSSCCCSEECSSSCCEESSHHHHHHHHHTTSSCCSCCSCCC
T ss_pred             CCCCCcCcCCCCCCcccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            34578888 9999999999999999998    899999988

>2en6_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.40  E-value=1.4e-07  Score=65.05  Aligned_cols=36  Identities=25%  Similarity=0.423  Sum_probs=32.9

Q ss_pred             cCCCCccc-cCccCcccCChHHHHHHhh----ccccccccc
Q 015460            6 KRVSSKVW-CYYCDREFDDEKILVQHQK----AKHFKCHVC   41 (406)
Q Consensus         6 kr~gEKp~-C~~CgK~Fs~ks~Lk~H~R----EKPfkC~~C   41 (406)
                      .+.++++| |.+|+|.|.++..|++|++    +|+|+|.+|
T Consensus         6 ~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2en6_A            6 SGSGEKPYGCNECGKTFSQKSILSAHQRTHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCSSCCEEETTTTEEESSHHHHHHHHHHHSSCCCSSSCCC
T ss_pred             ccCCCcCeECCCCCcccCchHHHHHHHHHcCCCCCCCCCCC
Confidence            34578888 9999999999999999998    899999998

>2ytj_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.40  E-value=1.7e-07  Score=64.64  Aligned_cols=36  Identities=25%  Similarity=0.364  Sum_probs=32.7

Q ss_pred             cCCCCccc-cCccCcccCChHHHHHHhh----ccccccccc
Q 015460            6 KRVSSKVW-CYYCDREFDDEKILVQHQK----AKHFKCHVC   41 (406)
Q Consensus         6 kr~gEKp~-C~~CgK~Fs~ks~Lk~H~R----EKPfkC~~C   41 (406)
                      .+.++++| |.+|||.|.++..|++|++    +++|+|.+|
T Consensus         6 ~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2ytj_A            6 SGTGEKPYICAECGKAFTIRSNLIKHQKIHTKQKPSGPSSG   46 (46)
T ss_dssp             TTSSCCSEECSSSCCEESSHHHHHHHHHHTSCCCCSSCSCC
T ss_pred             CCCCCcCeECCCCChhhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            34578888 9999999999999999998    899999987

>2em5_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.39  E-value=1.8e-07  Score=64.62  Aligned_cols=36  Identities=31%  Similarity=0.327  Sum_probs=32.7

Q ss_pred             cCCCCccc-cCccCcccCChHHHHHHhh----ccccccccc
Q 015460            6 KRVSSKVW-CYYCDREFDDEKILVQHQK----AKHFKCHVC   41 (406)
Q Consensus         6 kr~gEKp~-C~~CgK~Fs~ks~Lk~H~R----EKPfkC~~C   41 (406)
                      .+.++++| |.+|||.|.++..|++|++    +++|+|.+|
T Consensus         6 ~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2em5_A            6 SGSSTKSHQCHECGRGFTLKSHLNQHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCSCSEECSSSCCEESSHHHHHHHHTTTSCSCCSSCCCC
T ss_pred             CCCCCCCeECCcCCCccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            34578888 9999999999999999998    899999998

>1vd4_A Transcription initiation factor IIE, alpha subunit; zinc finger; NMR {Homo sapiens} SCOP: g.41.3.1

Probab=98.39  E-value=5.4e-08  Score=72.42  Aligned_cols=50  Identities=16%  Similarity=0.397  Sum_probs=39.9

Q ss_pred             cCCCCccc-cCccCcccCChHHHHH-HhhccccccccccCccCCchhhHhhh
Q 015460            6 KRVSSKVW-CYYCDREFDDEKILVQ-HQKAKHFKCHVCHKKLSTAGGMAIHV   55 (406)
Q Consensus         6 kr~gEKp~-C~~CgK~Fs~ks~Lk~-H~REKPfkC~~CgksFss~s~LkrH~   55 (406)
                      .+.++++| |.+||+.|.....|.+ |..+++|+|.+|++.|....++..|.
T Consensus         8 ~H~~~k~~~C~~C~k~F~~~~~l~~~H~~~k~~~C~~C~k~f~~~~~~~~~~   59 (62)
T 1vd4_A            8 DSTNRASFKCPVCSSTFTDLEANQLFDPMTGTFRCTFCHTEVEEDESAMPKK   59 (62)
T ss_dssp             SCCSSSEEECSSSCCEEEHHHHHHHEETTTTEEBCSSSCCBCEECTTCSCCC
T ss_pred             HcCCCCCccCCCCCchhccHHHhHhhcCCCCCEECCCCCCccccCccccccc
Confidence            34578888 9999999999888862 22289999999999999988876553

>2eme_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.39  E-value=2e-07  Score=64.12  Aligned_cols=36  Identities=28%  Similarity=0.440  Sum_probs=32.8

Q ss_pred             cCCCCccc-cCccCcccCChHHHHHHhh----ccccccccc
Q 015460            6 KRVSSKVW-CYYCDREFDDEKILVQHQK----AKHFKCHVC   41 (406)
Q Consensus         6 kr~gEKp~-C~~CgK~Fs~ks~Lk~H~R----EKPfkC~~C   41 (406)
                      .+.++++| |.+||+.|..+..|++|++    +++|+|.+|
T Consensus         6 ~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2eme_A            6 SGSGEKPYVCDYCGKAFGLSAELVRHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             TTCCCCSEECSSSCCEESSHHHHHHHHGGGCCCSCCSSCCC
T ss_pred             CCCCCCCeECCCCChhhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            34578888 9999999999999999998    899999998

>2ytk_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.39  E-value=1.8e-07  Score=64.46  Aligned_cols=36  Identities=19%  Similarity=0.310  Sum_probs=32.7

Q ss_pred             cCCCCccc-cCccCcccCChHHHHHHhh----ccccccccc
Q 015460            6 KRVSSKVW-CYYCDREFDDEKILVQHQK----AKHFKCHVC   41 (406)
Q Consensus         6 kr~gEKp~-C~~CgK~Fs~ks~Lk~H~R----EKPfkC~~C   41 (406)
                      .+.++++| |.+|+|.|.++..|++|++    +++|+|.+|
T Consensus         6 ~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~c   46 (46)
T 2ytk_A            6 SGSGEKPYKCNECGKVFTQNSHLTNHWRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CSSSSCSEECSSSCCEESSHHHHHHHHHHHSSSSCSSCCCC
T ss_pred             cCCCCCCEeCCcCCCccCCHHHHHHHHHHHCCCCCCCCCCC
Confidence            34578888 9999999999999999998    899999988

>2en8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.39  E-value=1.9e-07  Score=64.22  Aligned_cols=36  Identities=22%  Similarity=0.207  Sum_probs=32.7

Q ss_pred             cCCCCccc-cCccCcccCChHHHHHHhh----ccccccccc
Q 015460            6 KRVSSKVW-CYYCDREFDDEKILVQHQK----AKHFKCHVC   41 (406)
Q Consensus         6 kr~gEKp~-C~~CgK~Fs~ks~Lk~H~R----EKPfkC~~C   41 (406)
                      .+.++++| |.+|+|.|.+...|++|++    +|+|+|..|
T Consensus         6 ~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2en8_A            6 SGSGEKSHTCDECGKNFCYISALRIHQRVHMGEKCSGPSSG   46 (46)
T ss_dssp             CCCCCSSEECTTTCCEESSHHHHHHHHTTTCCSCSSCCSCC
T ss_pred             cCCCCCCeECCCcCcccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            34578888 9999999999999999998    899999988

>2epw_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.39  E-value=1.8e-07  Score=64.36  Aligned_cols=36  Identities=25%  Similarity=0.330  Sum_probs=32.8

Q ss_pred             cCCCCccc-cCccCcccCChHHHHHHhh----ccccccccc
Q 015460            6 KRVSSKVW-CYYCDREFDDEKILVQHQK----AKHFKCHVC   41 (406)
Q Consensus         6 kr~gEKp~-C~~CgK~Fs~ks~Lk~H~R----EKPfkC~~C   41 (406)
                      .+.++++| |.+|||.|.++..|++|++    +|+|+|.+|
T Consensus         6 ~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2epw_A            6 SGTGEKPCKCTECGKAFCWKSQLIMHQRTHVDDKHSGPSSG   46 (46)
T ss_dssp             CCCCCCSEECSSSCCEESSSHHHHHHHHHCCSCCCSCCCCC
T ss_pred             cCCCCCCeeCCCCCCccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            34578888 9999999999999999998    899999988

>1njq_A Superman protein; zinc-finger, peptide-zinc complex, beta-BETA-ALFA motif, metal binding protein; NMR {Synthetic} SCOP: g.37.1.3 PDB: 2l1o_A

Probab=98.38  E-value=1.1e-07  Score=63.33  Aligned_cols=34  Identities=12%  Similarity=0.419  Sum_probs=30.8

Q ss_pred             ccccccccccCccCCchhhHhhhhhhccCccccc
Q 015460           33 AKHFKCHVCHKKLSTAGGMAIHVLQVHKENVTKV   66 (406)
Q Consensus        33 EKPfkC~~CgksFss~s~LkrH~rthHgek~~~C   66 (406)
                      +|+|+|.+|++.|.+.++|++|+++|+++++|.|
T Consensus         4 ~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~~   37 (39)
T 1njq_A            4 PRSYTCSFCKREFRSAQALGGHMNVHRRDRARLR   37 (39)
T ss_dssp             SSSEECTTTCCEESSHHHHHHHHHTTCCSCTTTT
T ss_pred             CCceECCCCCcccCCHHHHHHHHHHcCCCcccee
Confidence            7899999999999999999999999999887765

>2ep3_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.37  E-value=2.3e-07  Score=63.94  Aligned_cols=36  Identities=28%  Similarity=0.403  Sum_probs=32.4

Q ss_pred             cCCCCccc-cCccCcccCChHHHHHHhh----ccccccccc
Q 015460            6 KRVSSKVW-CYYCDREFDDEKILVQHQK----AKHFKCHVC   41 (406)
Q Consensus         6 kr~gEKp~-C~~CgK~Fs~ks~Lk~H~R----EKPfkC~~C   41 (406)
                      .+.++++| |.+|+|.|.++..|++|++    +++|+|.+|
T Consensus         6 ~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~~   46 (46)
T 2ep3_A            6 SGTGEKPYRCAECGKAFTDRSNLFTHQKIHTGEKPSGPSSG   46 (46)
T ss_dssp             SSSCCCSEECSSSCCEESSHHHHHHHHTTTTTSCCCCTTCC
T ss_pred             CCCCCCCeECCCCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            34578888 9999999999999999998    899999876

>2ytg_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.36  E-value=1.4e-07  Score=64.98  Aligned_cols=36  Identities=22%  Similarity=0.360  Sum_probs=32.8

Q ss_pred             cCCCCccc-cCccCcccCChHHHHHHhh----ccccccccc
Q 015460            6 KRVSSKVW-CYYCDREFDDEKILVQHQK----AKHFKCHVC   41 (406)
Q Consensus         6 kr~gEKp~-C~~CgK~Fs~ks~Lk~H~R----EKPfkC~~C   41 (406)
                      .+.++++| |.+|+|.|.++..|++|++    +++|+|.+|
T Consensus         6 ~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ytg_A            6 SGTGEKPFKCGECGKSYNQRVHLTQHQRVHTGEKPSGPSSG   46 (46)
T ss_dssp             CCSSCCSEECTTTCCEESSSHHHHTTGGGGSSCCSSCSCCC
T ss_pred             CCCCCCCeECCCCCcccCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            34578888 9999999999999999998    899999998

>2en1_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.36  E-value=2.1e-07  Score=64.12  Aligned_cols=36  Identities=22%  Similarity=0.344  Sum_probs=32.9

Q ss_pred             cCCCCccc-cCccCcccCChHHHHHHhh----ccccccccc
Q 015460            6 KRVSSKVW-CYYCDREFDDEKILVQHQK----AKHFKCHVC   41 (406)
Q Consensus         6 kr~gEKp~-C~~CgK~Fs~ks~Lk~H~R----EKPfkC~~C   41 (406)
                      .+.++++| |.+|||.|.++..|++|++    +++|+|.+|
T Consensus         6 ~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2en1_A            6 SGSGEKPFKCEECGKRFTQNSQLHSHQRVHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCCSEEETTTTEEESSHHHHHHHGGGGSCCCCSCCCCC
T ss_pred             CCCCCCCeeCCCCCcccCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            34578888 9999999999999999998    899999988

>2d9k_A FLN29 gene product; zinc finger, ZF-TRAF, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.35  E-value=3.1e-07  Score=71.46  Aligned_cols=54  Identities=20%  Similarity=0.364  Sum_probs=47.1

Q ss_pred             CCCCccc-cCccCcccCChHHHHHHhh---ccccccccccCccCCchhhHhhhhhhccCc
Q 015460            7 RVSSKVW-CYYCDREFDDEKILVQHQK---AKHFKCHVCHKKLSTAGGMAIHVLQVHKEN   62 (406)
Q Consensus         7 r~gEKp~-C~~CgK~Fs~ks~Lk~H~R---EKPfkC~~CgksFss~s~LkrH~rthHgek   62 (406)
                      .-+++++ |.+|++.| ....|..|+.   +++|.|..|++.|. +..|..|+++|.+++
T Consensus        12 ~c~~r~~~C~~C~~~~-~~~~L~~H~~~c~~~~~~C~~C~~~~~-~~~l~~H~~~c~~~~   69 (75)
T 2d9k_A           12 ECPLRLAVCQHCDLEL-SILKLKEHEDYCGARTELCGNCGRNVL-VKDLKTHPEVCGREG   69 (75)
T ss_dssp             CCCCCCEECSSSCCEE-CHHHHHHHHHHHHHCEEECSSSCCEEE-TTGGGTHHHHBTTBS
T ss_pred             cCCCcccCCcccChHh-hHHHHHHHHhHcCCCceEcccCCCcCc-HHHHHHHHHHccCCc
Confidence            3477888 99999999 4999999988   99999999999987 589999998887764

>2em2_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.34  E-value=2.9e-07  Score=63.51  Aligned_cols=36  Identities=19%  Similarity=0.300  Sum_probs=32.4

Q ss_pred             cCCCCccc-cCccCcccCChHHHHHHhh----ccccccccc
Q 015460            6 KRVSSKVW-CYYCDREFDDEKILVQHQK----AKHFKCHVC   41 (406)
Q Consensus         6 kr~gEKp~-C~~CgK~Fs~ks~Lk~H~R----EKPfkC~~C   41 (406)
                      .+.++++| |.+|+|.|.++..|++|++    +|+|+|.+|
T Consensus         6 ~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~~   46 (46)
T 2em2_A            6 SGSGEKPFKCKECGKAFRQNIHLASHLRIHTGEKPSGPSSG   46 (46)
T ss_dssp             SCCCCCSEECSSSCCEESSHHHHHHHHHHHCCCCSSCSSCC
T ss_pred             CCCCCCCEECCcCCchhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            34578888 9999999999999999998    899999876

>2epx_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.33  E-value=3.9e-07  Score=62.79  Aligned_cols=36  Identities=19%  Similarity=0.347  Sum_probs=32.3

Q ss_pred             cCCCCccc-cCccCcccCChHHHHHHhh-----ccccccccc
Q 015460            6 KRVSSKVW-CYYCDREFDDEKILVQHQK-----AKHFKCHVC   41 (406)
Q Consensus         6 kr~gEKp~-C~~CgK~Fs~ks~Lk~H~R-----EKPfkC~~C   41 (406)
                      .+.++++| |.+|+|.|.++..|++|++     +|+|+|.+|
T Consensus         6 ~H~~~k~~~C~~C~k~F~~~~~L~~H~~~~H~~~k~~~C~~C   47 (47)
T 2epx_A            6 SGTGKKPYECIECGKAFIQNTSLIRHWRYYHTGEKPSGPSSG   47 (47)
T ss_dssp             CCCCCCSBCCSSSCCCBSSHHHHHHHHTTTTTTSCSSSCCCC
T ss_pred             ccCCCCCEECCccCchhCChHHHHHHhHhhcCCCCCCCCCCC
Confidence            34578888 9999999999999999986     899999988

>1x6f_A Zinc finger protein 462; zinc finger domain, KIAA1803, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.32  E-value=1.7e-07  Score=75.53  Aligned_cols=50  Identities=12%  Similarity=0.214  Sum_probs=36.4

Q ss_pred             CCCCccc-cCccCcccCChHHHHHHhh----ccccccccccCccCCchhhHhhhhhhcc
Q 015460            7 RVSSKVW-CYYCDREFDDEKILVQHQK----AKHFKCHVCHKKLSTAGGMAIHVLQVHK   60 (406)
Q Consensus         7 r~gEKp~-C~~CgK~Fs~ks~Lk~H~R----EKPfkC~~CgksFss~s~LkrH~rthHg   60 (406)
                      +.++++| |.+|+|.|.+...|++|++    +++|+|..|.    ++..|..|+++|.+
T Consensus        20 H~~~kpy~C~~C~k~F~~~~~L~~H~~~Ht~ekp~~C~~~~----~~~~~~~~~~~~~~   74 (88)
T 1x6f_A           20 RLQNSTYQCKHCDSKLQSTAELTSHLNIHNEEFQKRAKRQE----RRKQLLSKQKYADG   74 (88)
T ss_dssp             CCCCSCEECSSSCCEESSHHHHHHHHHHHHHHHHHHCCCCS----CCCCCCCCCCCCCC
T ss_pred             cCCCCCCcCCCCCCEeCCHHHHHHHHHHhCCCCCcccchhh----hHHHHHhhhccccc
Confidence            3467777 8888888888888888877    7888886653    45666667666655

>1x6f_A Zinc finger protein 462; zinc finger domain, KIAA1803, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.30  E-value=1.3e-08  Score=82.05  Aligned_cols=36  Identities=17%  Similarity=0.408  Sum_probs=33.8

Q ss_pred             ccccccccccCccCCchhhHhhhhhhccCcccccCC
Q 015460           33 AKHFKCHVCHKKLSTAGGMAIHVLQVHKENVTKVPN   68 (406)
Q Consensus        33 EKPfkC~~CgksFss~s~LkrH~rthHgek~~~Cp~   68 (406)
                      +++|+|.+|++.|.+..+|++|+++|+++++|+|..
T Consensus        23 ~kpy~C~~C~k~F~~~~~L~~H~~~Ht~ekp~~C~~   58 (88)
T 1x6f_A           23 NSTYQCKHCDSKLQSTAELTSHLNIHNEEFQKRAKR   58 (88)
T ss_dssp             CSCEECSSSCCEESSHHHHHHHHHHHHHHHHHHCCC
T ss_pred             CCCCcCCCCCCEeCCHHHHHHHHHHhCCCCCcccch
Confidence            899999999999999999999999999999998843

>1x3c_A Zinc finger protein 292; DNA binding, nuclear protein, C2H2-type zinc finger, KIAA0530, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.27  E-value=7.4e-07  Score=69.88  Aligned_cols=36  Identities=8%  Similarity=0.265  Sum_probs=32.5

Q ss_pred             cccccccc--ccCccCCchhhHhhh-hhhccCcccccCC
Q 015460           33 AKHFKCHV--CHKKLSTAGGMAIHV-LQVHKENVTKVPN   68 (406)
Q Consensus        33 EKPfkC~~--CgksFss~s~LkrH~-rthHgek~~~Cp~   68 (406)
                      ||||+|.+  |+|+|.+.++|++|+ ++|+++|++-|-.
T Consensus        25 EKPYkC~~~~CgKaFsr~s~L~~H~rriHTgEKP~~~~~   63 (73)
T 1x3c_A           25 YRPYRCVHQGCFAAFTIQQNLILHYQAVHKSDLPAFSAE   63 (73)
T ss_dssp             SCSCBCCSTTCCCBCSSHHHHHHHHHHHSSSCCCCCCCS
T ss_pred             CCCeECCCCCcChhHcCHHHHHHHhhhhCCCCCCccccc
Confidence            99999976  999999999999997 5799999988864

>2ent_A Krueppel-like factor 15; zinc binding, transcription factor, adipogenesis, CLCNKA, chloride channel Ka, rhodopsin, IRBP; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.27  E-value=3.2e-07  Score=63.50  Aligned_cols=36  Identities=17%  Similarity=0.256  Sum_probs=26.0

Q ss_pred             ccccccc--cccCccCCchhhHhhhhhhccCcccccCC
Q 015460           33 AKHFKCH--VCHKKLSTAGGMAIHVLQVHKENVTKVPN   68 (406)
Q Consensus        33 EKPfkC~--~CgksFss~s~LkrH~rthHgek~~~Cp~   68 (406)
                      +|+|+|.  +|++.|.++..|++|+++|+++++|+|..
T Consensus        10 ~k~~~C~~~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   47 (48)
T 2ent_A           10 EKPFACTWPGCGWRFSRSDELSRHRRSHSGVKPSGPSS   47 (48)
T ss_dssp             CCCEECCSSSCCCEESSHHHHHHHHTTSCCCCSCSSCC
T ss_pred             CCCeECCCCCCCCccCCHHHHHHHHHHhCCCCCCCCCC
Confidence            6777776  67777777777777777777777666653

>2kfq_A FP1; protein, de novo protein; NMR {Synthetic}

Probab=98.27  E-value=8.7e-08  Score=61.51  Aligned_cols=31  Identities=16%  Similarity=0.367  Sum_probs=28.7

Q ss_pred             cccccccccCccCCchhhHhhhhhhccCccc
Q 015460           34 KHFKCHVCHKKLSTAGGMAIHVLQVHKENVT   64 (406)
Q Consensus        34 KPfkC~~CgksFss~s~LkrH~rthHgek~~   64 (406)
                      |+|+|.+|++.|.++++|++|+++|+++++|
T Consensus         1 kp~~C~~C~k~f~~~~~L~~H~~~H~~~kp~   31 (32)
T 2kfq_A            1 YAFACPACPKRFMRSDALSKHIKTAFIVVAL   31 (32)
T ss_dssp             CCSSSSSSCTTHHHHHTTSSSTTSSSSSSSC
T ss_pred             CCCCCCCCCcccCCHHHHHHHHHHHccCCCC
Confidence            6899999999999999999999999988765

>2ctu_A Zinc finger protein 483; zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.26  E-value=7.1e-09  Score=77.63  Aligned_cols=58  Identities=16%  Similarity=0.157  Sum_probs=49.7

Q ss_pred             hHHHHHHhh----ccccccccccCccCCchhhHhhhhhhccCcccccCCCCCCCCccceeecCCCCCCHhHHHHHhhhcc
Q 015460           24 EKILVQHQK----AKHFKCHVCHKKLSTAGGMAIHVLQVHKENVTKVPNAKPGRESTDIEIYGMQGIPPDVLAAHYGEEE   99 (406)
Q Consensus        24 ks~Lk~H~R----EKPfkC~~CgksFss~s~LkrH~rthHgek~~~Cp~~~~~r~s~~c~iCG~~fi~~~~L~~H~k~he   99 (406)
                      +..|.+|++    +++|+|.+|++.|.....|.+       +            ..+.|++||+.|.....|..|++.|.
T Consensus         3 ~~~l~~H~~~h~~~~~~~C~~C~k~f~~~~~l~~-------~------------~~~~C~~C~~~f~~~~~l~~H~~~H~   63 (73)
T 2ctu_A            3 SGSSGKRQKIHLGDRSQKCSKCGIIFIRRSTLSR-------R------------KTPMCEKCRKDSCQEAALNKDEGNES   63 (73)
T ss_dssp             CCSCCCCCCCCCCCSEEECSSSCCEEECCCCCCC-------S------------SSCCCHHHHHTCSCCCSSCCCSSCCC
T ss_pred             chhHHHHHHHhCCCCCeeCCcccchhCCHHHhCc-------C------------CCCCCCCCChhhcCHHHHHHHHHhhc
Confidence            455677777    899999999999999998876       2            45788999999999999999999987


Q ss_pred             C
Q 015460          100 E  100 (406)
Q Consensus       100 ~  100 (406)
                      +
T Consensus        64 ~   64 (73)
T 2ctu_A           64 G   64 (73)
T ss_dssp             C
T ss_pred             C
Confidence            6

>2elx_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}

Probab=98.25  E-value=3.2e-07  Score=59.03  Aligned_cols=30  Identities=23%  Similarity=0.521  Sum_probs=27.5

Q ss_pred             ccccccccccCccCCchhhHhhhhhhccCc
Q 015460           33 AKHFKCHVCHKKLSTAGGMAIHVLQVHKEN   62 (406)
Q Consensus        33 EKPfkC~~CgksFss~s~LkrH~rthHgek   62 (406)
                      +|+|+|.+|++.|.++++|++|++.|++++
T Consensus         5 ~k~~~C~~C~k~f~~~~~L~~H~~~h~~~k   34 (35)
T 2elx_A            5 SSGYVCALCLKKFVSSIRLRSHIREVHGAA   34 (35)
T ss_dssp             CCSEECSSSCCEESSHHHHHHHHHHTSCTT
T ss_pred             CCCeECCCCcchhCCHHHHHHHHHHHcCCC
Confidence            789999999999999999999999998875

>2m0d_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=98.22  E-value=4.1e-07  Score=55.96  Aligned_cols=30  Identities=17%  Similarity=0.423  Sum_probs=27.1

Q ss_pred             ccccccccccCccCCchhhHhhhhhhccCc
Q 015460           33 AKHFKCHVCHKKLSTAGGMAIHVLQVHKEN   62 (406)
Q Consensus        33 EKPfkC~~CgksFss~s~LkrH~rthHgek   62 (406)
                      +++|+|.+|++.|.....|.+|+++|++++
T Consensus         1 ~k~~~C~~C~~~f~~~~~l~~H~~~h~~~k   30 (30)
T 2m0d_A            1 MKPYQCDYCGRSFSDPTSKMRHLETHDTDK   30 (30)
T ss_dssp             CCCEECTTTCCEESCHHHHHHHHHTTCCCC
T ss_pred             CcCccCCCCCcccCCHHHHHHHHHHhccCC
Confidence            589999999999999999999999888764

>1srk_A Zinc finger protein ZFPM1; classical zinc finger, transcription; NMR {Mus musculus} SCOP: g.37.1.1

Probab=98.22  E-value=4.6e-07  Score=58.52  Aligned_cols=30  Identities=20%  Similarity=0.400  Sum_probs=27.5

Q ss_pred             ccccccccccCccCCchhhHhhhhhhccCc
Q 015460           33 AKHFKCHVCHKKLSTAGGMAIHVLQVHKEN   62 (406)
Q Consensus        33 EKPfkC~~CgksFss~s~LkrH~rthHgek   62 (406)
                      +|+|+|.+|++.|.+++.|++|++.|++++
T Consensus         5 ~k~~~C~~C~k~f~~~~~l~~H~~~H~~~~   34 (35)
T 1srk_A            5 KRPFVCRICLSAFTTKANCARHLKVHTDTL   34 (35)
T ss_dssp             CSCEECSSSCCEESSHHHHHHHHGGGTSCC
T ss_pred             CcCeeCCCCCcccCCHHHHHHHHHHcCCCC
Confidence            789999999999999999999999988765

>2elo_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.21  E-value=3.9e-07  Score=59.61  Aligned_cols=30  Identities=27%  Similarity=0.528  Sum_probs=27.5

Q ss_pred             ccccccccccCccCCchhhHhhhhhhccCc
Q 015460           33 AKHFKCHVCHKKLSTAGGMAIHVLQVHKEN   62 (406)
Q Consensus        33 EKPfkC~~CgksFss~s~LkrH~rthHgek   62 (406)
                      +++|+|.+|++.|.++.+|++|+++|++++
T Consensus         7 ~k~~~C~~C~k~f~~~~~l~~H~~~h~~~k   36 (37)
T 2elo_A            7 GRSYSCPVCEKSFSEDRLIKSHIKTNHPEV   36 (37)
T ss_dssp             CCCCEETTTTEECSSHHHHHHHHHHHCSSC
T ss_pred             CCCcCCCCCCCccCCHHHHHHHHHHHcCCC
Confidence            789999999999999999999999998876

>2yrm_A B-cell lymphoma 6 protein; ZF-C2H2, zinc binding, DNA binding, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=98.21  E-value=8.9e-07  Score=60.37  Aligned_cols=34  Identities=24%  Similarity=0.367  Sum_probs=30.6

Q ss_pred             CCCCccc-cCccCcccCChHHHHHHhh----cccccccc
Q 015460            7 RVSSKVW-CYYCDREFDDEKILVQHQK----AKHFKCHV   40 (406)
Q Consensus         7 r~gEKp~-C~~CgK~Fs~ks~Lk~H~R----EKPfkC~~   40 (406)
                      +.++++| |.+|+|.|.++..|++|++    +|+|+|.+
T Consensus         5 h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   43 (43)
T 2yrm_A            5 SSGNGAFFCNECDCRFSEEASLKRHTLQTHSDKSGPSSG   43 (43)
T ss_dssp             CSSSCCBCCSSSCCCBSSHHHHHHHHHHHTCTTCSSSCC
T ss_pred             cCCCCCEECCCCCCeeCChHHHHHHHHhhCCCCCccCCC
Confidence            4578888 9999999999999999998    89999974

>1p7a_A BF3, BKLF, kruppel-like factor 3; classical zinc finger, transcription factor, DNA binding protein; NMR {Mus musculus} SCOP: g.37.1.1 PDB: 1u85_A 1u86_A

Probab=98.20  E-value=4.8e-07  Score=59.15  Aligned_cols=29  Identities=24%  Similarity=0.460  Sum_probs=25.7

Q ss_pred             ccccccccccCccCCchhhHhhhhhhccC
Q 015460           33 AKHFKCHVCHKKLSTAGGMAIHVLQVHKE   61 (406)
Q Consensus        33 EKPfkC~~CgksFss~s~LkrH~rthHge   61 (406)
                      +|+|+|.+|++.|.++..|.+|+++|+++
T Consensus         9 ~k~~~C~~C~k~f~~~~~l~~H~~~H~~~   37 (37)
T 1p7a_A            9 IKPFQCPDCDRSFSRSDHLALHRKRHMLV   37 (37)
T ss_dssp             SSSBCCTTTCCCBSSHHHHHHHHGGGTCC
T ss_pred             CCCccCCCCCcccCcHHHHHHHHHHhccC
Confidence            88999999999999999999999888764

>2eom_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.20  E-value=9.7e-07  Score=60.95  Aligned_cols=35  Identities=17%  Similarity=0.255  Sum_probs=31.2

Q ss_pred             cCCCCccc-cCccCcccCChHHHHHHhh----cccccccc
Q 015460            6 KRVSSKVW-CYYCDREFDDEKILVQHQK----AKHFKCHV   40 (406)
Q Consensus         6 kr~gEKp~-C~~CgK~Fs~ks~Lk~H~R----EKPfkC~~   40 (406)
                      .+.++++| |.+|+|.|.++..|++|++    +|+|+|++
T Consensus         6 ~h~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2eom_A            6 SGHGERGHRCSDCGKFFLQASNFIQHRRIHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCCSSCCCSSSCCCCSSHHHHHHHHHHHSSCCCSSCCC
T ss_pred             CCCCCCCcCCCCCCCeeCChHHHHHHHHHhCCCCCCCCCC
Confidence            44578888 9999999999999999998    89999973

>2ent_A Krueppel-like factor 15; zinc binding, transcription factor, adipogenesis, CLCNKA, chloride channel Ka, rhodopsin, IRBP; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.20  E-value=9.3e-07  Score=61.11  Aligned_cols=37  Identities=19%  Similarity=0.296  Sum_probs=33.0

Q ss_pred             ccCCCCccc-cC--ccCcccCChHHHHHHhh----ccccccccc
Q 015460            5 KKRVSSKVW-CY--YCDREFDDEKILVQHQK----AKHFKCHVC   41 (406)
Q Consensus         5 kkr~gEKp~-C~--~CgK~Fs~ks~Lk~H~R----EKPfkC~~C   41 (406)
                      ..+.++++| |.  +|+|.|.++..|++|++    +|+|+|.+|
T Consensus         5 ~~H~~~k~~~C~~~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   48 (48)
T 2ent_A            5 SSGTGEKPFACTWPGCGWRFSRSDELSRHRRSHSGVKPSGPSSG   48 (48)
T ss_dssp             CSSCCCCCEECCSSSCCCEESSHHHHHHHHTTSCCCCSCSSCCC
T ss_pred             CCcCCCCCeECCCCCCCCccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            345578888 98  89999999999999998    899999988

>2emg_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.19  E-value=1.1e-06  Score=60.45  Aligned_cols=35  Identities=20%  Similarity=0.363  Sum_probs=31.0

Q ss_pred             cCCCCccc-cCccCcccCChHHHHHHhh----cccccccc
Q 015460            6 KRVSSKVW-CYYCDREFDDEKILVQHQK----AKHFKCHV   40 (406)
Q Consensus         6 kr~gEKp~-C~~CgK~Fs~ks~Lk~H~R----EKPfkC~~   40 (406)
                      .+.++++| |.+|+|.|.++..|++|++    +|+|+|++
T Consensus         6 ~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~   45 (46)
T 2emg_A            6 SGTGENPFICSECGKVFTHKTNLIIHQKIHTGERPSGPSS   45 (46)
T ss_dssp             CCCSCCSCBCTTTCCBCSSHHHHHHHHTTTSCCCCSCSCC
T ss_pred             CCCCCCCEECCccCcccCCHHHHHHHHHHhCCCCCCCCCC
Confidence            34578888 9999999999999999998    89999974

>2enf_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.19  E-value=1.2e-06  Score=60.29  Aligned_cols=35  Identities=23%  Similarity=0.391  Sum_probs=31.1

Q ss_pred             cCCCCccc-cCccCcccCChHHHHHHhh----cccccccc
Q 015460            6 KRVSSKVW-CYYCDREFDDEKILVQHQK----AKHFKCHV   40 (406)
Q Consensus         6 kr~gEKp~-C~~CgK~Fs~ks~Lk~H~R----EKPfkC~~   40 (406)
                      .+.++++| |.+|+|.|.++..|++|++    +++|+|.+
T Consensus         6 ~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2enf_A            6 SGTGEKPYKCNECGKVFTQNSHLVRHRGIHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCCCSCBCSSSCCBCSSHHHHHHHHTTTTTSSCCCCSC
T ss_pred             CCCCCcCeECCCCCcccCCHHHHHHHHHhhCCCCCCCCCC
Confidence            34578888 9999999999999999998    89999974

>1rik_A E6APC1 peptide; E6-binding domain, zinc finger, human papillomavirus, HPV E6 protein, de novo protein; NMR {Synthetic} SCOP: k.12.1.1 PDB: 1sp1_A 1va3_A

Probab=98.18  E-value=6.6e-07  Score=54.93  Aligned_cols=29  Identities=21%  Similarity=0.564  Sum_probs=26.4

Q ss_pred             cccccccccCccCCchhhHhhhhhhccCc
Q 015460           34 KHFKCHVCHKKLSTAGGMAIHVLQVHKEN   62 (406)
Q Consensus        34 KPfkC~~CgksFss~s~LkrH~rthHgek   62 (406)
                      |+|+|.+|++.|.+...|.+|+++|++++
T Consensus         1 k~~~C~~C~k~f~~~~~l~~H~~~H~~~k   29 (29)
T 1rik_A            1 YKFACPECPKRFMRSDHLTLHILLHENKK   29 (29)
T ss_dssp             CCEECSSSSCEESCSHHHHHHHTGGGSCC
T ss_pred             CCccCCCCCchhCCHHHHHHHHHHhcCCC
Confidence            68999999999999999999999988764

>2yti_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.18  E-value=1.2e-06  Score=60.25  Aligned_cols=35  Identities=20%  Similarity=0.359  Sum_probs=31.0

Q ss_pred             cCCCCccc-cCccCcccCChHHHHHHhh----cccccccc
Q 015460            6 KRVSSKVW-CYYCDREFDDEKILVQHQK----AKHFKCHV   40 (406)
Q Consensus         6 kr~gEKp~-C~~CgK~Fs~ks~Lk~H~R----EKPfkC~~   40 (406)
                      .+.++++| |.+|+|.|.++..|++|++    +++|+|.+
T Consensus         6 ~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2yti_A            6 SGTGEKPYKCNECGKVFTQNSHLARHRGIHTGEKPSGPSS   45 (46)
T ss_dssp             CCSCCCTTCCSSSCCCCSSHHHHHHHHTTTSCSCCSSTTC
T ss_pred             CCCCCcCeECCCCCcccCChhHHHHHhHhcCCCCCCCCCC
Confidence            34578888 9999999999999999998    89999974

>2eon_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.18  E-value=1.1e-06  Score=60.67  Aligned_cols=35  Identities=23%  Similarity=0.391  Sum_probs=31.1

Q ss_pred             cCCCCccc-cCccCcccCChHHHHHHhh----cccccccc
Q 015460            6 KRVSSKVW-CYYCDREFDDEKILVQHQK----AKHFKCHV   40 (406)
Q Consensus         6 kr~gEKp~-C~~CgK~Fs~ks~Lk~H~R----EKPfkC~~   40 (406)
                      .+.++++| |.+|+|.|.++..|++|++    +|+|+|.+
T Consensus         6 ~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2eon_A            6 SGTGEKPYKCQVCGKAFRVSSHLVQHHSVHSGERPSGPSS   45 (46)
T ss_dssp             SCSSCCSCBCSSSCCBCSSHHHHHHHTTTTTSCCSCTTSC
T ss_pred             CCCCCcccCCCCCCcccCcHHHHHHHHHhcCCCCCCCCCC
Confidence            34578888 9999999999999999998    89999974

>2emj_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eoi_A

Probab=98.17  E-value=1.1e-06  Score=60.60  Aligned_cols=35  Identities=23%  Similarity=0.357  Sum_probs=31.2

Q ss_pred             cCCCCccc-cCccCcccCChHHHHHHhh----cccccccc
Q 015460            6 KRVSSKVW-CYYCDREFDDEKILVQHQK----AKHFKCHV   40 (406)
Q Consensus         6 kr~gEKp~-C~~CgK~Fs~ks~Lk~H~R----EKPfkC~~   40 (406)
                      .+.++++| |.+|+|.|.++..|++|++    +|+|+|++
T Consensus         6 ~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2emj_A            6 SGTGEKPFECAECGKSFSISSQLATHQRIHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCCCSEECSSSSCEESSHHHHHHHHHHHTTSCSSSSCC
T ss_pred             CCCCCCCEECCCCCcccCCHHHHHHHHHHhCCCCCCCCCC
Confidence            34578888 9999999999999999998    89999974

>1ard_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 PDB: 1arf_A 1are_A

Probab=98.17  E-value=7.6e-07  Score=54.52  Aligned_cols=29  Identities=21%  Similarity=0.494  Sum_probs=26.1

Q ss_pred             cccccccccCccCCchhhHhhhhhhccCc
Q 015460           34 KHFKCHVCHKKLSTAGGMAIHVLQVHKEN   62 (406)
Q Consensus        34 KPfkC~~CgksFss~s~LkrH~rthHgek   62 (406)
                      |+|+|.+|++.|.+...|.+|+++|++++
T Consensus         1 k~~~C~~C~~~f~~~~~l~~H~~~h~~~k   29 (29)
T 1ard_A            1 RSFVCEVCTRAFARQEHLKRHYRSHTNEK   29 (29)
T ss_dssp             CCCBCTTTCCBCSSHHHHHHHHHHHSCCC
T ss_pred             CCeECCCCCcccCCHHHHHHHHHHhcCCC
Confidence            58999999999999999999999988763

>2eln_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.17  E-value=5.6e-07  Score=61.66  Aligned_cols=29  Identities=14%  Similarity=0.187  Sum_probs=26.6

Q ss_pred             cccccccc--ccCccCCchhhHhhhhhhccC
Q 015460           33 AKHFKCHV--CHKKLSTAGGMAIHVLQVHKE   61 (406)
Q Consensus        33 EKPfkC~~--CgksFss~s~LkrH~rthHge   61 (406)
                      ||||+|.+  |+++|.++++|++|+++|+++
T Consensus         7 ekp~~C~~~~C~k~F~~~~~L~~H~r~Htg~   37 (38)
T 2eln_A            7 GILLKCPTDGCDYSTPDKYKLQAHLKVHTAL   37 (38)
T ss_dssp             CCCEECSSSSCCCEESCHHHHHHHHHHHSCC
T ss_pred             CCCCCCCCCCCCCccCCHHHHHHHHHhcCCC
Confidence            89999986  999999999999999999875

>2elr_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.17  E-value=7.5e-07  Score=57.71  Aligned_cols=30  Identities=27%  Similarity=0.530  Sum_probs=27.1

Q ss_pred             ccccccccccCccCCchhhHhhhhhhccCc
Q 015460           33 AKHFKCHVCHKKLSTAGGMAIHVLQVHKEN   62 (406)
Q Consensus        33 EKPfkC~~CgksFss~s~LkrH~rthHgek   62 (406)
                      +++|+|.+|++.|.++..|.+|+++|++++
T Consensus         7 ~~~~~C~~C~k~f~~~~~l~~H~~~H~~ek   36 (36)
T 2elr_A            7 GKTHLCDMCGKKFKSKGTLKSHKLLHTADG   36 (36)
T ss_dssp             CSSCBCTTTCCBCSSHHHHHHHHHHHSSCC
T ss_pred             CCCeecCcCCCCcCchHHHHHHHHHhcCCC
Confidence            789999999999999999999999888764

>2ytp_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.17  E-value=1.1e-06  Score=60.47  Aligned_cols=35  Identities=20%  Similarity=0.422  Sum_probs=31.2

Q ss_pred             cCCCCccc-cCccCcccCChHHHHHHhh----cccccccc
Q 015460            6 KRVSSKVW-CYYCDREFDDEKILVQHQK----AKHFKCHV   40 (406)
Q Consensus         6 kr~gEKp~-C~~CgK~Fs~ks~Lk~H~R----EKPfkC~~   40 (406)
                      .+.++++| |.+|+|.|.++..|++|++    +|+|+|.+
T Consensus         6 ~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2ytp_A            6 SGTGERHYECSECGKAFARKSTLIMHQRIHTGEKPSGPSS   45 (46)
T ss_dssp             SSCCCCCEECSSSCCEESSHHHHHHHHTTTSCCCCCSSCC
T ss_pred             CcCCCCCeECCcCCcccCCHHHHHHHHHHhCCCCCCCCCC
Confidence            34578888 9999999999999999998    89999974

>2em4_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.17  E-value=1.1e-06  Score=60.53  Aligned_cols=35  Identities=17%  Similarity=0.410  Sum_probs=31.2

Q ss_pred             cCCCCccc-cCccCcccCChHHHHHHhh----cccccccc
Q 015460            6 KRVSSKVW-CYYCDREFDDEKILVQHQK----AKHFKCHV   40 (406)
Q Consensus         6 kr~gEKp~-C~~CgK~Fs~ks~Lk~H~R----EKPfkC~~   40 (406)
                      .+.++++| |.+|+|.|.++..|++|++    +|+|+|.+
T Consensus         6 ~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2em4_A            6 SGTGQRPYECIECGKAFKTKSSLICHRRSHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCSSSEECSSSCCEESSHHHHHHHHHHHSSSSCCCCCC
T ss_pred             ccCCCcCcCCCCCCCccCCHHHHHHHHHhcCCCCCCCCCC
Confidence            34578888 9999999999999999998    89999974

>2ept_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.17  E-value=1.2e-06  Score=58.73  Aligned_cols=33  Identities=18%  Similarity=0.435  Sum_probs=29.8

Q ss_pred             cCCCCccc-cCccCcccCChHHHHHHhh----cccccc
Q 015460            6 KRVSSKVW-CYYCDREFDDEKILVQHQK----AKHFKC   38 (406)
Q Consensus         6 kr~gEKp~-C~~CgK~Fs~ks~Lk~H~R----EKPfkC   38 (406)
                      .+.++++| |.+|+|.|.....|++|++    +|+|+|
T Consensus         4 ~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C   41 (41)
T 2ept_A            4 GSSGQRVYECQECGKSFRQKGSLTLHERIHTGSGPSSG   41 (41)
T ss_dssp             SCCCCCCEECSSSCCEESSHHHHHHHGGGCCCCSCSCC
T ss_pred             ccCCCCCeECCCCCCCcCCHHHHHHHHHHhCCCCCcCC
Confidence            44578888 9999999999999999998    899988

>2ytf_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.17  E-value=1.2e-06  Score=60.19  Aligned_cols=35  Identities=23%  Similarity=0.433  Sum_probs=31.2

Q ss_pred             cCCCCccc-cCccCcccCChHHHHHHhh----cccccccc
Q 015460            6 KRVSSKVW-CYYCDREFDDEKILVQHQK----AKHFKCHV   40 (406)
Q Consensus         6 kr~gEKp~-C~~CgK~Fs~ks~Lk~H~R----EKPfkC~~   40 (406)
                      .+.++++| |.+|+|.|.++..|++|++    +++|+|.+
T Consensus         6 ~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2ytf_A            6 SGTGEKPFECSECQKAFNTKSNLIVHQRTHTGEKPSGPSS   45 (46)
T ss_dssp             SSCCCCSEECSSSCCEESSHHHHHHHHHTSCSSSSSCCCC
T ss_pred             CCCCCCCcCCCCCCcccCCHHHHHHHHHHhCCCCCCCCCC
Confidence            34578888 9999999999999999998    89999974

>2eq2_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.16  E-value=1.4e-06  Score=59.97  Aligned_cols=35  Identities=23%  Similarity=0.423  Sum_probs=31.1

Q ss_pred             cCCCCccc-cCccCcccCChHHHHHHhh----cccccccc
Q 015460            6 KRVSSKVW-CYYCDREFDDEKILVQHQK----AKHFKCHV   40 (406)
Q Consensus         6 kr~gEKp~-C~~CgK~Fs~ks~Lk~H~R----EKPfkC~~   40 (406)
                      .+.++++| |.+|+|.|.++..|++|++    +|+|+|++
T Consensus         6 ~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2eq2_A            6 SGTGGKPYQCNECGKAFSQTSKLARHQRVHTGEKPSGPSS   45 (46)
T ss_dssp             SSSSSCSSSCCSSCCCCSSHHHHHHHGGGGCCCCCCCCCC
T ss_pred             ccCCCCCeECCCCCcccCCHHHHHHHHHHcCCCCCCCCCC
Confidence            34578888 9999999999999999998    89999974

>2epu_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.16  E-value=1.1e-06  Score=60.30  Aligned_cols=35  Identities=26%  Similarity=0.410  Sum_probs=31.3

Q ss_pred             cCCCCccc-cCccCcccCChHHHHHHhh----cccccccc
Q 015460            6 KRVSSKVW-CYYCDREFDDEKILVQHQK----AKHFKCHV   40 (406)
Q Consensus         6 kr~gEKp~-C~~CgK~Fs~ks~Lk~H~R----EKPfkC~~   40 (406)
                      .+.++++| |.+|+|.|.++..|++|++    +|+|+|.+
T Consensus         6 ~h~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (45)
T 2epu_A            6 SGTGQKPFECTHCGKSFRAKGNLVTHQRIHTGEKSGPSSG   45 (45)
T ss_dssp             CCCSCCSEEETTTTEEESSHHHHHHHHTTTSSCCCCCSCC
T ss_pred             CCCCCcCccCCCCCCccCChHHHHHHHHHhCCCCCCCCCC
Confidence            45578888 9999999999999999998    89999974

>2em6_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.16  E-value=1.5e-06  Score=59.89  Aligned_cols=35  Identities=26%  Similarity=0.462  Sum_probs=31.1

Q ss_pred             cCCCCccc-cCccCcccCChHHHHHHhh----cccccccc
Q 015460            6 KRVSSKVW-CYYCDREFDDEKILVQHQK----AKHFKCHV   40 (406)
Q Consensus         6 kr~gEKp~-C~~CgK~Fs~ks~Lk~H~R----EKPfkC~~   40 (406)
                      .+.++++| |.+|+|.|.++..|++|++    +|+|+|..
T Consensus         6 ~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2em6_A            6 SGMGEKCYKCDVCGKEFSQSSHLQTHQRVHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCCCCCBCSSSCCBCSSHHHHHHHHTTTSSSCCCCTTC
T ss_pred             ccCCCCCeECCCCCcccCCHHHHHHHHHHcCCCCCCCCCC
Confidence            34578888 9999999999999999998    89999974

>2eor_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.16  E-value=1.2e-06  Score=60.11  Aligned_cols=35  Identities=23%  Similarity=0.378  Sum_probs=31.1

Q ss_pred             cCCCCccc-cCccCcccCChHHHHHHhh----cccccccc
Q 015460            6 KRVSSKVW-CYYCDREFDDEKILVQHQK----AKHFKCHV   40 (406)
Q Consensus         6 kr~gEKp~-C~~CgK~Fs~ks~Lk~H~R----EKPfkC~~   40 (406)
                      .+.++++| |.+|+|.|.++..|++|++    +|+|+|++
T Consensus         6 ~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~kp~~C~~   45 (46)
T 2eor_A            6 SGTGEKPYNCEECGKAFIHDSQLQEHQRIHTGEKPSGPSS   45 (46)
T ss_dssp             SSSCCCSEECTTTCCEESSHHHHHHHHHHHHSCCCSSSTT
T ss_pred             CcCCCcCccCCCCCCCcCCHHHHHHHHHhcCCCCCCCCCC
Confidence            34578888 9999999999999999998    89999974

>2yth_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.15  E-value=1.6e-06  Score=59.75  Aligned_cols=35  Identities=23%  Similarity=0.370  Sum_probs=31.1

Q ss_pred             cCCCCccc-cCccCcccCChHHHHHHhh----cccccccc
Q 015460            6 KRVSSKVW-CYYCDREFDDEKILVQHQK----AKHFKCHV   40 (406)
Q Consensus         6 kr~gEKp~-C~~CgK~Fs~ks~Lk~H~R----EKPfkC~~   40 (406)
                      .+.++++| |.+|+|.|.++..|++|++    +++|+|++
T Consensus         6 ~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2yth_A            6 SGSGEKPFQCEECGKRFTQNSHLHSHQRVHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCSSSBCCSSSCCCBSSHHHHHHHGGGGTTCCCSSCCC
T ss_pred             CCCCCcCCCCCCCCcccCCHHHHHHHHHhcCCCCCCCCCC
Confidence            34578888 9999999999999999998    89999974

>1zfd_A SWI5; DNA binding motif, zinc finger DNA binding domain; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=98.15  E-value=1.1e-06  Score=55.54  Aligned_cols=30  Identities=13%  Similarity=0.360  Sum_probs=27.3

Q ss_pred             ccccccc--cccCccCCchhhHhhhhhhccCc
Q 015460           33 AKHFKCH--VCHKKLSTAGGMAIHVLQVHKEN   62 (406)
Q Consensus        33 EKPfkC~--~CgksFss~s~LkrH~rthHgek   62 (406)
                      ||+|+|.  .|++.|.+...|++|+++|++++
T Consensus         1 ek~~~C~~~~C~k~f~~~~~L~~H~~~H~~~~   32 (32)
T 1zfd_A            1 DRPYSCDHPGCDKAFVRNHDLIRHKKSHQEKA   32 (32)
T ss_dssp             CCSBCCCCTTCCCCBSSSHHHHHHHGGGTCCC
T ss_pred             CCCCcCcCCCCCCccCCHHHHHHHHHHccCCC
Confidence            6899999  89999999999999999998764

>2enh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.15  E-value=1.3e-06  Score=60.12  Aligned_cols=35  Identities=26%  Similarity=0.428  Sum_probs=31.0

Q ss_pred             cCCCCccc-cCccCcccCChHHHHHHhh----cccccccc
Q 015460            6 KRVSSKVW-CYYCDREFDDEKILVQHQK----AKHFKCHV   40 (406)
Q Consensus         6 kr~gEKp~-C~~CgK~Fs~ks~Lk~H~R----EKPfkC~~   40 (406)
                      .+.++++| |.+|+|.|.++..|++|++    +|+|+|..
T Consensus         6 ~h~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2enh_A            6 SGTGEKPYECDVCRKAFSHHASLTQHQRVHSGEKPSGPSS   45 (46)
T ss_dssp             CCCCSSSCBCTTTCCBCSSSHHHHHHGGGSCCSCCCCCCC
T ss_pred             CcCCCCCcCCCCcCchhCCHHHHHHHHHHhCCCCCCCCCC
Confidence            34578888 9999999999999999998    89999963

>2lvr_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, classical zinc finger, transcription; NMR {Homo sapiens}

Probab=97.45  E-value=2.7e-07  Score=57.11  Aligned_cols=30  Identities=23%  Similarity=0.512  Sum_probs=27.1

Q ss_pred             ccccccccccCccCCchhhHhhhhhhccCc
Q 015460           33 AKHFKCHVCHKKLSTAGGMAIHVLQVHKEN   62 (406)
Q Consensus        33 EKPfkC~~CgksFss~s~LkrH~rthHgek   62 (406)
                      +|+|+|.+|++.|.+..+|.+|+++|++++
T Consensus         1 ~k~~~C~~C~k~f~~~~~l~~H~~~h~~~k   30 (30)
T 2lvr_A            1 MKPYVCIHCQRQFADPGALQRHVRIHTGEK   30 (30)
Confidence            589999999999999999999999888753

>1klr_A Zinc finger Y-chromosomal protein; transcription; NMR {Synthetic} SCOP: g.37.1.1 PDB: 5znf_A 1kls_A 1xrz_A* 7znf_A

Probab=98.15  E-value=1.1e-06  Score=54.03  Aligned_cols=29  Identities=17%  Similarity=0.559  Sum_probs=26.8

Q ss_pred             cccccccccCccCCchhhHhhhhhhccCc
Q 015460           34 KHFKCHVCHKKLSTAGGMAIHVLQVHKEN   62 (406)
Q Consensus        34 KPfkC~~CgksFss~s~LkrH~rthHgek   62 (406)
                      |+|+|.+|++.|.....|.+|+++|++++
T Consensus         1 k~~~C~~C~k~f~~~~~l~~H~~~h~~~~   29 (30)
T 1klr_A            1 KTYQCQYCEFRSADSSNLKTHIKTKHSKE   29 (30)
T ss_dssp             CCCCCSSSSCCCSCSHHHHHHHHHHTSSC
T ss_pred             CCccCCCCCCccCCHHHHHHHHHHHccCC
Confidence            58999999999999999999999998875

>2emi_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.15  E-value=1.3e-06  Score=60.08  Aligned_cols=35  Identities=20%  Similarity=0.361  Sum_probs=31.0

Q ss_pred             cCCCCccc-cCccCcccCChHHHHHHhh----cccccccc
Q 015460            6 KRVSSKVW-CYYCDREFDDEKILVQHQK----AKHFKCHV   40 (406)
Q Consensus         6 kr~gEKp~-C~~CgK~Fs~ks~Lk~H~R----EKPfkC~~   40 (406)
                      .+.++++| |.+|+|.|.++..|++|++    +|+|+|..
T Consensus         6 ~H~~~~~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2emi_A            6 SGTGERHYECSECGKAFIQKSTLSMHQRIHRGEKPSGPSS   45 (46)
T ss_dssp             SCSSCCCEECSSSCCEESSHHHHHHHHGGGCSCCCCSCCC
T ss_pred             ccCCCCCCCCCCCCcccCCHHHHHHHHhHhCCCCCCCCCC
Confidence            34578888 9999999999999999998    89999963

>2ep1_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.15  E-value=1.5e-06  Score=59.55  Aligned_cols=34  Identities=21%  Similarity=0.324  Sum_probs=30.6

Q ss_pred             CCCCccc-cCccCcccCChHHHHHHhh----cccccccc
Q 015460            7 RVSSKVW-CYYCDREFDDEKILVQHQK----AKHFKCHV   40 (406)
Q Consensus         7 r~gEKp~-C~~CgK~Fs~ks~Lk~H~R----EKPfkC~~   40 (406)
                      +.++++| |.+|+|.|.++..|++|++    +|+|+|++
T Consensus         7 H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2ep1_A            7 GTGEKPYECSDCGKSFIKKSQLHVHQRIHTGENPSGPSS   45 (46)
T ss_dssp             CSSCCSSCCSSSCCCCSSHHHHHHHHGGGSSSCCCSSSC
T ss_pred             CCCCCCcCCCCCCchhCCHHHHHHHHHHhCCCCCCCCCC
Confidence            4578888 9999999999999999998    89999974

>2en9_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.15  E-value=1.5e-06  Score=59.91  Aligned_cols=35  Identities=23%  Similarity=0.425  Sum_probs=31.1

Q ss_pred             cCCCCccc-cCccCcccCChHHHHHHhh----cccccccc
Q 015460            6 KRVSSKVW-CYYCDREFDDEKILVQHQK----AKHFKCHV   40 (406)
Q Consensus         6 kr~gEKp~-C~~CgK~Fs~ks~Lk~H~R----EKPfkC~~   40 (406)
                      .+.++++| |.+|+|.|.++..|++|++    +|+|+|.+
T Consensus         6 ~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2en9_A            6 SGAGKKLFKCNECKKTFTQSSSLTVHQRIHTGEKPSGPSS   45 (46)
T ss_dssp             SCCSSCCCBCTTTCCBCSSHHHHHHHHHHHTSSCCCSCCC
T ss_pred             CCCCCCCEECCccCcccCCHHHHHHHHHHcCCCCCCCCCC
Confidence            34578888 9999999999999999998    89999974

>2eos_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.15  E-value=1.5e-06  Score=58.55  Aligned_cols=34  Identities=18%  Similarity=0.301  Sum_probs=30.2

Q ss_pred             ccCCCCccc-cCccCcccCChHHHHHHhh----cccccc
Q 015460            5 KKRVSSKVW-CYYCDREFDDEKILVQHQK----AKHFKC   38 (406)
Q Consensus         5 kkr~gEKp~-C~~CgK~Fs~ks~Lk~H~R----EKPfkC   38 (406)
                      +...++++| |.+|+|.|.++..|++|++    +++|+|
T Consensus         4 ~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   42 (42)
T 2eos_A            4 GSSGGEKPYPCEICGTRFRHLQTLKSHLRIHTGSGPSSG   42 (42)
T ss_dssp             SCCSSSCCBCCSSSCCCBSSHHHHHHHTTTTSCCSSTTC
T ss_pred             cccCCCCCEECCCCCCccCCHHHHHHHHHhcCCCCCCCC
Confidence            345588888 9999999999999999998    899988

>2eow_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.15  E-value=1.3e-06  Score=59.96  Aligned_cols=35  Identities=23%  Similarity=0.348  Sum_probs=31.2

Q ss_pred             cCCCCccc-cCccCcccCChHHHHHHhh----cccccccc
Q 015460            6 KRVSSKVW-CYYCDREFDDEKILVQHQK----AKHFKCHV   40 (406)
Q Consensus         6 kr~gEKp~-C~~CgK~Fs~ks~Lk~H~R----EKPfkC~~   40 (406)
                      .+.++++| |.+|+|.|.++..|++|++    +|+|+|.+
T Consensus         6 ~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2eow_A            6 SGTGEKPYKCNECGKAFRARSSLAIHQATHSGEKPSGPSS   45 (46)
T ss_dssp             CSCCCCCEECTTSCCEESSHHHHHHHHHHHCCCSCSCTTC
T ss_pred             CCCCCCCeeccccCChhcCHHHHHHHHHHcCCCCCCCCCC
Confidence            34578888 9999999999999999998    89999974

>2elv_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.15  E-value=6.8e-07  Score=58.18  Aligned_cols=30  Identities=20%  Similarity=0.437  Sum_probs=26.5

Q ss_pred             ccccccccccCccCCchhhHhhhhhhccCc
Q 015460           33 AKHFKCHVCHKKLSTAGGMAIHVLQVHKEN   62 (406)
Q Consensus        33 EKPfkC~~CgksFss~s~LkrH~rthHgek   62 (406)
                      +++|+|.+|++.|.+++.|.+|+++|++++
T Consensus         7 ~k~~~C~~C~k~f~~~~~l~~H~~~H~~~k   36 (36)
T 2elv_A            7 GLLYDCHICERKFKNELDRDRHMLVHGDKW   36 (36)
T ss_dssp             CCCEECSSSCCEESSHHHHHHHHTTTSTTC
T ss_pred             CCCeECCCCCCccCCHHHHHHHHHHhcCCC
Confidence            789999999999999999999998887653

>2yts_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.14  E-value=1.4e-06  Score=59.71  Aligned_cols=35  Identities=20%  Similarity=0.360  Sum_probs=31.1

Q ss_pred             cCCCCccc-cCccCcccCChHHHHHHhh----cccccccc
Q 015460            6 KRVSSKVW-CYYCDREFDDEKILVQHQK----AKHFKCHV   40 (406)
Q Consensus         6 kr~gEKp~-C~~CgK~Fs~ks~Lk~H~R----EKPfkC~~   40 (406)
                      .+.++++| |.+|+|.|.++..|++|++    +++|+|.+
T Consensus         6 ~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~p~~C~~   45 (46)
T 2yts_A            6 SGTGEKPYICNECGKSFIQKSHLNRHRRIHTGEKPSGPSS   45 (46)
T ss_dssp             CCCSCCSEECSSSCCEESSHHHHHHHGGGTSSCCSSCCCC
T ss_pred             CCCCCcCEECCCCChhhCChHHHHHHHHhcCCCCCcCCCC
Confidence            34578888 9999999999999999998    89999974

>2m0e_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=98.14  E-value=9.7e-07  Score=53.78  Aligned_cols=29  Identities=28%  Similarity=0.544  Sum_probs=26.4

Q ss_pred             cccccccccCccCCchhhHhhhhhhccCc
Q 015460           34 KHFKCHVCHKKLSTAGGMAIHVLQVHKEN   62 (406)
Q Consensus        34 KPfkC~~CgksFss~s~LkrH~rthHgek   62 (406)
                      |+|+|.+|++.|.....|..|+++|++++
T Consensus         1 k~~~C~~C~~~f~~~~~l~~H~~~h~~~~   29 (29)
T 2m0e_A            1 KEHKCPHCDKKFNQVGNLKAHLKIHIADG   29 (29)
T ss_dssp             CCCCCSSCCCCCCTTTHHHHHHHHHHSCC
T ss_pred             CCCcCCCCCcccCCHHHHHHHHHHhccCC
Confidence            68999999999999999999999988764

>2elt_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.14  E-value=7.2e-07  Score=57.80  Aligned_cols=30  Identities=20%  Similarity=0.459  Sum_probs=26.8

Q ss_pred             ccccccccccCccCCchhhHhhhhhhccCc
Q 015460           33 AKHFKCHVCHKKLSTAGGMAIHVLQVHKEN   62 (406)
Q Consensus        33 EKPfkC~~CgksFss~s~LkrH~rthHgek   62 (406)
                      +|+|+|.+|++.|..+..|++|+++|++++
T Consensus         7 ~k~~~C~~C~k~f~~~~~l~~H~~~H~~~k   36 (36)
T 2elt_A            7 GKPYKCPQCSYASAIKANLNVHLRKHTGEK   36 (36)
T ss_dssp             CCSEECSSSSCEESSHHHHHHHHHHHTCCC
T ss_pred             CCCCCCCCCCcccCCHHHHHHHHHHccCCC
Confidence            789999999999999999999998888764

>2eq1_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.14  E-value=1.6e-06  Score=59.53  Aligned_cols=35  Identities=23%  Similarity=0.343  Sum_probs=31.0

Q ss_pred             cCCCCccc-cCccCcccCChHHHHHHhh----cccccccc
Q 015460            6 KRVSSKVW-CYYCDREFDDEKILVQHQK----AKHFKCHV   40 (406)
Q Consensus         6 kr~gEKp~-C~~CgK~Fs~ks~Lk~H~R----EKPfkC~~   40 (406)
                      .+.++++| |.+|+|.|.++..|++|++    +|+|+|+.
T Consensus         6 ~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2eq1_A            6 SGTGEKPYKCNECGKAFRAHSNLTTHQVIHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCSCCCCCTTTTCCCSSHHHHHHHHTTTCCSCCSSCCC
T ss_pred             ccCCCCCeECCcCChhhCCHHHHHHHHHHhCCCCCCCCCC
Confidence            34578888 9999999999999999998    89999963

>2yte_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.13  E-value=1.7e-06  Score=58.05  Aligned_cols=33  Identities=33%  Similarity=0.512  Sum_probs=29.9

Q ss_pred             CCCCccc-cCccCcccCChHHHHHHhh----ccccccc
Q 015460            7 RVSSKVW-CYYCDREFDDEKILVQHQK----AKHFKCH   39 (406)
Q Consensus         7 r~gEKp~-C~~CgK~Fs~ks~Lk~H~R----EKPfkC~   39 (406)
                      +.++++| |.+|+|.|.+++.|++|++    +++|+|.
T Consensus         5 H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   42 (42)
T 2yte_A            5 SSGEKPYSCAECKETFSDNNRLVQHQKMHTVKSGPSSG   42 (42)
T ss_dssp             SCSCCSCBCTTTCCBCSSHHHHHHHHHHTSCCSSCCCC
T ss_pred             cCCCCCeECCCCCCccCCHHHHHHHHHHhCCCCCCCCC
Confidence            4578888 9999999999999999998    8999984

>2em3_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.13  E-value=1.4e-06  Score=59.82  Aligned_cols=35  Identities=29%  Similarity=0.452  Sum_probs=31.1

Q ss_pred             cCCCCccc-cCccCcccCChHHHHHHhh----cccccccc
Q 015460            6 KRVSSKVW-CYYCDREFDDEKILVQHQK----AKHFKCHV   40 (406)
Q Consensus         6 kr~gEKp~-C~~CgK~Fs~ks~Lk~H~R----EKPfkC~~   40 (406)
                      .+.++++| |.+|+|.|.++..|.+|++    +++|+|.+
T Consensus         6 ~H~~~~~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C~~   45 (46)
T 2em3_A            6 SGTGEKPYECKVCSKAFTQKAHLAQHQKTHTGEKPSGPSS   45 (46)
T ss_dssp             CCSSCCSEECSSSCCEESSHHHHHHHHHHHCCCCCCCSCC
T ss_pred             CCCCCcCeECCCCCcccCCHHHHHHHHHHhCCCCCCCCCC
Confidence            34578888 9999999999999999998    89999974

>2yrj_A Zinc finger protein 473; C2H2-type zinc finger, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.13  E-value=1.5e-06  Score=59.55  Aligned_cols=35  Identities=26%  Similarity=0.400  Sum_probs=31.0

Q ss_pred             cCCCCccc-cCccCcccCChHHHHHHhh----cccccccc
Q 015460            6 KRVSSKVW-CYYCDREFDDEKILVQHQK----AKHFKCHV   40 (406)
Q Consensus         6 kr~gEKp~-C~~CgK~Fs~ks~Lk~H~R----EKPfkC~~   40 (406)
                      .+.++++| |.+|+|.|.++..|++|++    +|+|+|.+
T Consensus         6 ~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2yrj_A            6 SGTGEKPYRCGECGKAFAQKANLTQHQRIHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCCCCEECSSSCCEESSHHHHHHHHTTTSSCCSSCSCC
T ss_pred             CCCCCCCeECCCCCCccCCHHHHHHHHHHcCCCCCCCCCC
Confidence            34578888 9999999999999999998    89999973

>2epc_A Zinc finger protein 32; zinc finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2yta_A

Probab=98.13  E-value=1.6e-06  Score=58.24  Aligned_cols=33  Identities=18%  Similarity=0.340  Sum_probs=29.9

Q ss_pred             cCCCCccc-cCccCcccCChHHHHHHhh----cccccc
Q 015460            6 KRVSSKVW-CYYCDREFDDEKILVQHQK----AKHFKC   38 (406)
Q Consensus         6 kr~gEKp~-C~~CgK~Fs~ks~Lk~H~R----EKPfkC   38 (406)
                      .+.++++| |.+|||.|.++..|++|++    +|+|+|
T Consensus         5 ~H~~~~~~~C~~C~k~f~~~~~l~~H~~~H~~~k~~~C   42 (42)
T 2epc_A            5 SSGGETPYLCGQCGKSFTQRGSLAVHQRSCSQSGPSSG   42 (42)
T ss_dssp             CCCSSCCEECSSSCCEESSHHHHHHHHHHTTCCCCCCC
T ss_pred             cCCCCCCeECCCCCcccCCHHHHHHHhhhcCCCCCCCC
Confidence            45578888 9999999999999999998    899998

>2kvf_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=98.12  E-value=7.6e-07  Score=54.44  Aligned_cols=28  Identities=25%  Similarity=0.458  Sum_probs=24.8

Q ss_pred             ccccccccccCccCCchhhHhhhhhhcc
Q 015460           33 AKHFKCHVCHKKLSTAGGMAIHVLQVHK   60 (406)
Q Consensus        33 EKPfkC~~CgksFss~s~LkrH~rthHg   60 (406)
                      ||+|+|.+|++.|.+...|.+|++.|++
T Consensus         1 ~k~~~C~~C~k~f~~~~~l~~H~~~h~~   28 (28)
T 2kvf_A            1 MRPYSCSVCGKRFSLKHQMETHYRVHTG   28 (28)
T ss_dssp             CCSEECSSSCCEESCHHHHHHHHTTSCC
T ss_pred             CcCccCCCCCcccCCHHHHHHHHHhcCC
Confidence            5899999999999999999999987753

>2eou_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.12  E-value=1.9e-06  Score=58.75  Aligned_cols=35  Identities=17%  Similarity=0.354  Sum_probs=30.8

Q ss_pred             ccCCCCccc-cCccCcccCChHHHHHHhh----ccccccc
Q 015460            5 KKRVSSKVW-CYYCDREFDDEKILVQHQK----AKHFKCH   39 (406)
Q Consensus         5 kkr~gEKp~-C~~CgK~Fs~ks~Lk~H~R----EKPfkC~   39 (406)
                      ..+.++++| |.+|+|.|.+...|++|++    +|+|+|+
T Consensus         5 ~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (44)
T 2eou_A            5 SSGAAKTTSECQECGKIFRHSSLLIEHQALHAGESGPSSG   44 (44)
T ss_dssp             CSCSSSCCCCCTTTCCCCSSHHHHHHHHHHHTTSCCCCCC
T ss_pred             CCCCCCcCeECCCCCcccCCHHHHHHHHHHHCCCCCCCCC
Confidence            345578888 9999999999999999998    8999984

>2els_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.12  E-value=8.3e-07  Score=57.75  Aligned_cols=30  Identities=23%  Similarity=0.451  Sum_probs=27.0

Q ss_pred             ccccccccccCccCCchhhHhhhhhhccCc
Q 015460           33 AKHFKCHVCHKKLSTAGGMAIHVLQVHKEN   62 (406)
Q Consensus        33 EKPfkC~~CgksFss~s~LkrH~rthHgek   62 (406)
                      +++|+|.+|++.|.....|++|+++|++++
T Consensus         7 ~k~~~C~~C~k~f~~~~~l~~H~~~H~~~k   36 (36)
T 2els_A            7 GKIFTCEYCNKVFKFKHSLQAHLRIHTNEK   36 (36)
T ss_dssp             CCCEECTTTCCEESSHHHHHHHHHHHCCCC
T ss_pred             CCCEECCCCCceeCCHHHHHHHHHHhCCCC
Confidence            789999999999999999999999888764

>2elq_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.12  E-value=8.6e-07  Score=57.69  Aligned_cols=30  Identities=23%  Similarity=0.509  Sum_probs=26.6

Q ss_pred             ccccccccccCccCCchhhHhhhhhhccCc
Q 015460           33 AKHFKCHVCHKKLSTAGGMAIHVLQVHKEN   62 (406)
Q Consensus        33 EKPfkC~~CgksFss~s~LkrH~rthHgek   62 (406)
                      +|+|+|.+|++.|.+..+|++|+++|++++
T Consensus         7 ~k~~~C~~C~k~f~~~~~l~~H~~~H~~~k   36 (36)
T 2elq_A            7 GKPFKCSLCEYATRSKSNLKAHMNRHSTEK   36 (36)
T ss_dssp             CCSEECSSSSCEESCHHHHHHHHHHSSTTC
T ss_pred             CCCccCCCCCchhCCHHHHHHHHHHhccCC
Confidence            789999999999999999999998887753

>2en2_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.11  E-value=1.6e-06  Score=58.31  Aligned_cols=33  Identities=18%  Similarity=0.203  Sum_probs=29.9

Q ss_pred             cCCCCccc-cCccCcccCChHHHHHHhh----cccccc
Q 015460            6 KRVSSKVW-CYYCDREFDDEKILVQHQK----AKHFKC   38 (406)
Q Consensus         6 kr~gEKp~-C~~CgK~Fs~ks~Lk~H~R----EKPfkC   38 (406)
                      .+.++++| |.+|+|.|.++..|++|++    +++|+|
T Consensus         5 ~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   42 (42)
T 2en2_A            5 SSGGEKPYKCETCGARFVQVAHLRAHVLIHTGSGPSSG   42 (42)
T ss_dssp             CCCSSCSEECTTTCCEESSHHHHHHHTHHHHSCCSSCC
T ss_pred             ccCCCCCEeCCCcChhhCCHHHHHHHHHHcCCCCCCCC
Confidence            45588888 9999999999999999998    899988

>2eoh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.11  E-value=2e-06  Score=59.22  Aligned_cols=34  Identities=21%  Similarity=0.322  Sum_probs=30.6

Q ss_pred             cCCCCccc-cCccCcccCChHHHHHHhh----ccccccc
Q 015460            6 KRVSSKVW-CYYCDREFDDEKILVQHQK----AKHFKCH   39 (406)
Q Consensus         6 kr~gEKp~-C~~CgK~Fs~ks~Lk~H~R----EKPfkC~   39 (406)
                      .+.++++| |.+|+|.|.++..|++|++    +|+|+|.
T Consensus         6 ~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2eoh_A            6 SGSGKKPYECKECRKTFIQIGHLNQHKRVHTGERSSGPS   44 (46)
T ss_dssp             SCCCSCSCCCSSSCCCCSSHHHHHHHHHHCSSCCSCSTT
T ss_pred             CcCCCCCcCCCCcCchhCCHHHHHHHHHHhCCCCCCCCC
Confidence            34578888 9999999999999999998    8999996

>2el5_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eol_A 2emv_A 2eqw_A 2en0_A 2epy_A

Probab=98.10  E-value=1.8e-06  Score=58.01  Aligned_cols=34  Identities=18%  Similarity=0.430  Sum_probs=30.3

Q ss_pred             cCCCCccc-cCccCcccCChHHHHHHhh----ccccccc
Q 015460            6 KRVSSKVW-CYYCDREFDDEKILVQHQK----AKHFKCH   39 (406)
Q Consensus         6 kr~gEKp~-C~~CgK~Fs~ks~Lk~H~R----EKPfkC~   39 (406)
                      .+.++++| |.+|+|.|.++..|++|++    +++|+|.
T Consensus         4 ~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   42 (42)
T 2el5_A            4 GSSGENPYECSECGKAFNRKDQLISHQRTHAGESGPSSG   42 (42)
T ss_dssp             SSSSCCSEECSSSCCEESSHHHHHHHHGGGCCCCSCCCC
T ss_pred             CCCCCCCccCCCcChhhCCHHHHHHHHHhcCCCCCCCCC
Confidence            34578888 9999999999999999998    8999984

>2eoj_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.10  E-value=1.7e-06  Score=58.81  Aligned_cols=34  Identities=24%  Similarity=0.428  Sum_probs=30.4

Q ss_pred             cCCCCccc-cCccCcccCChHHHHHHhh----ccccccc
Q 015460            6 KRVSSKVW-CYYCDREFDDEKILVQHQK----AKHFKCH   39 (406)
Q Consensus         6 kr~gEKp~-C~~CgK~Fs~ks~Lk~H~R----EKPfkC~   39 (406)
                      .+.++++| |.+|+|.|.++..|++|++    +++|+|+
T Consensus         6 ~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (44)
T 2eoj_A            6 SGTGENPYECCECGKVFSRKDQLVSHQKTHSGQSGPSSG   44 (44)
T ss_dssp             SSSSCCSCEETTTTEECSSHHHHHHHHTTSSSSCSCCCC
T ss_pred             ccCCCcCeeCCCCCCccCCHHHHHHHHHHcCCCCCCCCC
Confidence            44578888 9999999999999999998    8999984

>2en7_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.10  E-value=2e-06  Score=58.28  Aligned_cols=34  Identities=18%  Similarity=0.400  Sum_probs=30.3

Q ss_pred             cCCCCccc-cCccCcccCChHHHHHHhh----ccccccc
Q 015460            6 KRVSSKVW-CYYCDREFDDEKILVQHQK----AKHFKCH   39 (406)
Q Consensus         6 kr~gEKp~-C~~CgK~Fs~ks~Lk~H~R----EKPfkC~   39 (406)
                      .+.++++| |.+|||.|.++..|++|++    +++|+|+
T Consensus         6 ~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (44)
T 2en7_A            6 SGTGMKPYVCNECGKAFRSKSYLIIHTRTHTGESGPSSG   44 (44)
T ss_dssp             CSSSSSSSCCTTTCCCCSSHHHHHHHHTTTCCSSSSCCC
T ss_pred             CCCCCcCeECCCCCCccCCHHHHHHHhhhcCCCCCCCCC
Confidence            34578888 9999999999999999998    8999984

>2emz_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.10  E-value=2.1e-06  Score=59.13  Aligned_cols=34  Identities=18%  Similarity=0.347  Sum_probs=30.6

Q ss_pred             cCCCCccc-cCccCcccCChHHHHHHhh----ccccccc
Q 015460            6 KRVSSKVW-CYYCDREFDDEKILVQHQK----AKHFKCH   39 (406)
Q Consensus         6 kr~gEKp~-C~~CgK~Fs~ks~Lk~H~R----EKPfkC~   39 (406)
                      .+.++++| |.+|+|.|.+...|++|++    +|+|+|+
T Consensus         6 ~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2emz_A            6 SGSGERPFKCNECGKGFGRRSHLAGHLRLHSREKSSGPS   44 (46)
T ss_dssp             CSSCCCSCCCSSSCCCCSSHHHHHHHHHHHHHTTCCCSC
T ss_pred             CCCCCCCeECCCCCcccCCHHHHHHHHHHhCCCCCCCCC
Confidence            34578888 9999999999999999998    8999996

>1vd4_A Transcription initiation factor IIE, alpha subunit; zinc finger; NMR {Homo sapiens} SCOP: g.41.3.1

Probab=98.09  E-value=5.8e-08  Score=72.23  Aligned_cols=45  Identities=13%  Similarity=0.167  Sum_probs=35.1

Q ss_pred             ccccccccccCccCCchhhHhhhhhhccCcccccCCCCCCCCccceeecCCCCCCHhHHH
Q 015460           33 AKHFKCHVCHKKLSTAGGMAIHVLQVHKENVTKVPNAKPGRESTDIEIYGMQGIPPDVLA   92 (406)
Q Consensus        33 EKPfkC~~CgksFss~s~LkrH~rthHgek~~~Cp~~~~~r~s~~c~iCG~~fi~~~~L~   92 (406)
                      +++|+|.+|++.|.+...|+   +.|+++++|.            |.+||+.|...+.+.
T Consensus        12 ~k~~~C~~C~k~F~~~~~l~---~~H~~~k~~~------------C~~C~k~f~~~~~~~   56 (62)
T 1vd4_A           12 RASFKCPVCSSTFTDLEANQ---LFDPMTGTFR------------CTFCHTEVEEDESAM   56 (62)
T ss_dssp             SSEEECSSSCCEEEHHHHHH---HEETTTTEEB------------CSSSCCBCEECTTCS
T ss_pred             CCCccCCCCCchhccHHHhH---hhcCCCCCEE------------CCCCCCccccCcccc
Confidence            89999999999999998886   6777776554            566788876655443

>2elp_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.09  E-value=9.8e-07  Score=57.75  Aligned_cols=30  Identities=13%  Similarity=0.318  Sum_probs=26.8

Q ss_pred             ccccccccccCccCCc-hhhHhhhhhhccCc
Q 015460           33 AKHFKCHVCHKKLSTA-GGMAIHVLQVHKEN   62 (406)
Q Consensus        33 EKPfkC~~CgksFss~-s~LkrH~rthHgek   62 (406)
                      +++|+|.+|++.|.++ ++|++|+++|++++
T Consensus         7 ~k~~~C~~C~k~f~~~~~~L~~H~~~H~~~k   37 (37)
T 2elp_A            7 GRAMKCPYCDFYFMKNGSDLQRHIWAHEGVK   37 (37)
T ss_dssp             CCCEECSSSSCEECSSCHHHHHHHHHHHTCC
T ss_pred             CCCeECCCCChhhccCHHHHHHHHHhcCCCC
Confidence            7899999999999999 99999999888764

>2m0f_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=98.08  E-value=1e-06  Score=53.83  Aligned_cols=29  Identities=28%  Similarity=0.540  Sum_probs=26.2

Q ss_pred             cccccccccCccCCchhhHhhhhhhccCc
Q 015460           34 KHFKCHVCHKKLSTAGGMAIHVLQVHKEN   62 (406)
Q Consensus        34 KPfkC~~CgksFss~s~LkrH~rthHgek   62 (406)
                      |+|+|.+|++.|.....|.+|++.|++++
T Consensus         1 ~~~~C~~C~k~f~~~~~l~~H~~~H~~~k   29 (29)
T 2m0f_A            1 GPLKCRECGKQFTTSGNLKRHLRIHSGEK   29 (29)
T ss_dssp             CCEECTTTSCEESCHHHHHHHHHHHHTCC
T ss_pred             CCccCCCCCCccCChhHHHHHHHHhcCCC
Confidence            58999999999999999999999988764

>2lvt_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, transcription; NMR {Homo sapiens}

Probab=97.36  E-value=4.5e-07  Score=55.96  Aligned_cols=29  Identities=31%  Similarity=0.525  Sum_probs=26.1

Q ss_pred             cccccccccCccCCchhhHhhhhhhccCc
Q 015460           34 KHFKCHVCHKKLSTAGGMAIHVLQVHKEN   62 (406)
Q Consensus        34 KPfkC~~CgksFss~s~LkrH~rthHgek   62 (406)
                      |+|+|.+|++.|.+..+|.+|+++|++++
T Consensus         1 k~~~C~~C~k~f~~~~~l~~H~~~H~~~k   29 (29)
T 2lvt_A            1 KPCQCVMCGKAFTQASSLIAHVRQHTGEK   29 (29)
Confidence            58999999999999999999999888763

>2kvh_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=98.08  E-value=9.9e-07  Score=53.68  Aligned_cols=27  Identities=22%  Similarity=0.472  Sum_probs=23.6

Q ss_pred             ccccccccccCccCCchhhHhhhhhhc
Q 015460           33 AKHFKCHVCHKKLSTAGGMAIHVLQVH   59 (406)
Q Consensus        33 EKPfkC~~CgksFss~s~LkrH~rthH   59 (406)
                      ||+|+|.+|++.|.+...|++|+++|+
T Consensus         1 ek~~~C~~C~k~f~~~~~l~~H~~~H~   27 (27)
T 2kvh_A            1 EKPFSCSLCPQRSRDFSAMTKHLRTHG   27 (27)
T ss_dssp             CCCEECSSSSCEESSHHHHHHHHHHCC
T ss_pred             CcCccCCCcChhhCCHHHHHHHHHHcc
Confidence            578999999999999999999987763

>2kvg_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=98.08  E-value=7.9e-07  Score=54.48  Aligned_cols=27  Identities=19%  Similarity=0.459  Sum_probs=23.6

Q ss_pred             ccccccccccCccCCchhhHhhhhhhc
Q 015460           33 AKHFKCHVCHKKLSTAGGMAIHVLQVH   59 (406)
Q Consensus        33 EKPfkC~~CgksFss~s~LkrH~rthH   59 (406)
                      ||+|+|.+|++.|.+++.|++|+++|+
T Consensus         1 ~k~~~C~~C~k~f~~~~~l~~H~~~H~   27 (27)
T 2kvg_A            1 AAPYRCPLCRAGCPSLASMQAHMRGHS   27 (27)
T ss_dssp             CCTEEETTTTEEESCHHHHHHHHTTCC
T ss_pred             CcCcCCCCCCcccCCHHHHHHHHHhcC
Confidence            578999999999999999999987763

>2eoz_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.08  E-value=1.8e-06  Score=59.46  Aligned_cols=35  Identities=20%  Similarity=0.266  Sum_probs=31.0

Q ss_pred             cCCCCccc-cCccCcccCChHHHHHHhh----cccccccc
Q 015460            6 KRVSSKVW-CYYCDREFDDEKILVQHQK----AKHFKCHV   40 (406)
Q Consensus         6 kr~gEKp~-C~~CgK~Fs~ks~Lk~H~R----EKPfkC~~   40 (406)
                      .+.++++| |.+|+|.|.++..|++|++    +++|+|..
T Consensus         6 ~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~   45 (46)
T 2eoz_A            6 SGTGEKPYSCNVCGKAFVLSAHLNQHLRVHTQETLSGPSS   45 (46)
T ss_dssp             CCSSCCSEEETTTTEEESSHHHHHHHHHHHSSCCSSSCCC
T ss_pred             cCCCCCCeECcccChhhCCHHHHHHHHHHhCCCCCCCCCC
Confidence            34578888 9999999999999999998    89999963

>2yto_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.07  E-value=2.3e-06  Score=58.93  Aligned_cols=33  Identities=24%  Similarity=0.420  Sum_probs=30.2

Q ss_pred             CCCCccc-cCccCcccCChHHHHHHhh----ccccccc
Q 015460            7 RVSSKVW-CYYCDREFDDEKILVQHQK----AKHFKCH   39 (406)
Q Consensus         7 r~gEKp~-C~~CgK~Fs~ks~Lk~H~R----EKPfkC~   39 (406)
                      +.++++| |.+|+|.|.++..|++|++    +|+|+|+
T Consensus         7 H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2yto_A            7 GTGEKPYKCSDCGKAFTRKSGLHIHQQSHTGERHSGPS   44 (46)
T ss_dssp             CCSCCCEECSSSCCEESSHHHHHHHHHHHTCCCBTTTB
T ss_pred             cCCCCCEECcccCCccCCHhHHHHHHHHcCCCCCCCCC
Confidence            4578888 9999999999999999998    8999996

>2eof_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.06  E-value=2.4e-06  Score=57.85  Aligned_cols=34  Identities=21%  Similarity=0.438  Sum_probs=30.3

Q ss_pred             cCCCCccc-cCccCcccCChHHHHHHhh----ccccccc
Q 015460            6 KRVSSKVW-CYYCDREFDDEKILVQHQK----AKHFKCH   39 (406)
Q Consensus         6 kr~gEKp~-C~~CgK~Fs~ks~Lk~H~R----EKPfkC~   39 (406)
                      .+.++++| |.+|+|.|.+...|.+|++    +++|+|+
T Consensus         6 ~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (44)
T 2eof_A            6 SGTGEKPYECNECQKAFNTKSNLMVHQRTHTGESGPSSG   44 (44)
T ss_dssp             CCSCCCSEECTTTCCEESCHHHHHHHHHHTTTSSCSCCC
T ss_pred             CCCCCCCeECCCCCcccCCHhHHHHHHHHhCCCCCCCCC
Confidence            34578888 9999999999999999998    8999984

>2eq3_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.06  E-value=2.5e-06  Score=58.45  Aligned_cols=35  Identities=23%  Similarity=0.354  Sum_probs=30.9

Q ss_pred             cCCCCccc-cCccCcccCChHHHHHHhh----cccccccc
Q 015460            6 KRVSSKVW-CYYCDREFDDEKILVQHQK----AKHFKCHV   40 (406)
Q Consensus         6 kr~gEKp~-C~~CgK~Fs~ks~Lk~H~R----EKPfkC~~   40 (406)
                      .+.++++| |.+|+|.|..+..|++|++    +++|+|..
T Consensus         6 ~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2eq3_A            6 SGTGEKPYECNQCGKAFSVRSSLTTHQAIHTGKKPSGPSS   45 (46)
T ss_dssp             SSCCCCSSEETTTTEECSSHHHHHHHHTTSCCCCCCCSCC
T ss_pred             CCCCCCCeECCCCChhhCCHHHHHHHHHHhCCCCCCCCCC
Confidence            34578888 9999999999999999998    89999963

>2emb_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.05  E-value=2.8e-06  Score=57.81  Aligned_cols=34  Identities=29%  Similarity=0.437  Sum_probs=30.3

Q ss_pred             cCCCCccc-cCccCcccCChHHHHHHhh----ccccccc
Q 015460            6 KRVSSKVW-CYYCDREFDDEKILVQHQK----AKHFKCH   39 (406)
Q Consensus         6 kr~gEKp~-C~~CgK~Fs~ks~Lk~H~R----EKPfkC~   39 (406)
                      .+.++++| |.+|++.|.+...|++|++    +++|+|+
T Consensus         6 ~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (44)
T 2emb_A            6 SGHTRKRYECSKCQATFNLRKHLIQHQKTHAAKSGPSSG   44 (44)
T ss_dssp             CCCCCSSEECTTTCCEESCHHHHHHHGGGGCCCCCTTCC
T ss_pred             ccCCCCCeECCCCCCccCCHHHHHHHHHHcCCCCCcCCC
Confidence            34578888 9999999999999999998    8999984

>2ytb_A Zinc finger protein 32; zinc-finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.05  E-value=2.2e-06  Score=57.47  Aligned_cols=33  Identities=18%  Similarity=0.378  Sum_probs=29.8

Q ss_pred             cCCCCccc-cCccCcccCChHHHHHHhh----cccccc
Q 015460            6 KRVSSKVW-CYYCDREFDDEKILVQHQK----AKHFKC   38 (406)
Q Consensus         6 kr~gEKp~-C~~CgK~Fs~ks~Lk~H~R----EKPfkC   38 (406)
                      .+.++++| |.+|||.|.++..|.+|++    +++|+|
T Consensus         5 ~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   42 (42)
T 2ytb_A            5 SSGGEKPYRCDQCGKAFSQKGSLIVHIRVHTGSGPSSG   42 (42)
T ss_dssp             CCCSCCSBCCTTTTCCBSSHHHHHTTGGGTSCCSCCCC
T ss_pred             ccCCCCCeeCCCccchhCCHHHHHHHHHHhCCCCCCCC
Confidence            35578888 9999999999999999998    899988

>1sp2_A SP1F2; zinc finger, transcription activation; NMR {Homo sapiens} SCOP: g.37.1.1 PDB: 1va2_A

Probab=98.04  E-value=2e-06  Score=54.04  Aligned_cols=29  Identities=21%  Similarity=0.464  Sum_probs=26.2

Q ss_pred             cccccc--cccCccCCchhhHhhhhhhccCc
Q 015460           34 KHFKCH--VCHKKLSTAGGMAIHVLQVHKEN   62 (406)
Q Consensus        34 KPfkC~--~CgksFss~s~LkrH~rthHgek   62 (406)
                      |+|+|.  +|++.|.+.+.|++|+++|++++
T Consensus         1 kp~~C~~~~C~k~f~~~~~L~~H~~~H~~~k   31 (31)
T 1sp2_A            1 RPFMCTWSYCGKRFTRSDELQRHKRTHTGEK   31 (31)
T ss_dssp             CCCBCCSTTCCCBCSSHHHHHHHHTTTSCCC
T ss_pred             CCcCCcCCCCCcccCCHhHHHHHHHHhcCCC
Confidence            689998  89999999999999999998764

>3iuf_A Zinc finger protein UBI-D4; structural genomics consortium (SGC), C2H2, APO metal-binding, nucleus, phosphoprotein, transcription, TRAN regulation; 1.80A {Homo sapiens}

Probab=98.03  E-value=1.1e-06  Score=61.87  Aligned_cols=33  Identities=21%  Similarity=0.544  Sum_probs=27.5

Q ss_pred             HhhccccccccccCccCCchhhHhhhh-hhccCc
Q 015460           30 HQKAKHFKCHVCHKKLSTAGGMAIHVL-QVHKEN   62 (406)
Q Consensus        30 H~REKPfkC~~CgksFss~s~LkrH~r-thHgek   62 (406)
                      |..+|+|+|.+|++.|.++.+|++|++ +|.++.
T Consensus         2 Ht~~kp~~C~~C~k~F~~~~~L~~H~~~~H~~e~   35 (48)
T 3iuf_A            2 EDRDKPYACDICGKRYKNRPGLSYHYAHSHLAEE   35 (48)
T ss_dssp             CTTTSCEECTTTCCEESSHHHHHHHHHHSSCC--
T ss_pred             CCCCcCEECCCcCcccCCHHHHHHHhhhhcCCCC
Confidence            444899999999999999999999999 777764

>1bhi_A CRE-BP1, ATF-2; CRE binding protein, transcriptional activation domain, Zn finger, DNA-binding regulatory protein; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.03  E-value=1.4e-06  Score=57.28  Aligned_cols=32  Identities=19%  Similarity=0.353  Sum_probs=28.6

Q ss_pred             ccccccc--cccCccCCchhhHhhhhhhccCccc
Q 015460           33 AKHFKCH--VCHKKLSTAGGMAIHVLQVHKENVT   64 (406)
Q Consensus        33 EKPfkC~--~CgksFss~s~LkrH~rthHgek~~   64 (406)
                      +|+|+|.  .|++.|.++++|++|+++|+++++|
T Consensus         4 ~k~~~C~~~~C~k~f~~~~~L~~H~~~H~~~k~~   37 (38)
T 1bhi_A            4 DKPFLCTAPGCGQRFTNEDHLAVHKHKHEMTLKF   37 (38)
T ss_dssp             CCCEECCCTTTCCEESSHHHHHHHHHHHHTTTTT
T ss_pred             CcceECCCCCCCcccCCHHHHHHHHHHhCCCCCC
Confidence            7899999  5999999999999999999888765

>2yu5_A Zinc finger protein 473; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.02  E-value=2.9e-06  Score=57.72  Aligned_cols=34  Identities=26%  Similarity=0.502  Sum_probs=30.4

Q ss_pred             cCCCCccc-cCccCcccCChHHHHHHhh----ccccccc
Q 015460            6 KRVSSKVW-CYYCDREFDDEKILVQHQK----AKHFKCH   39 (406)
Q Consensus         6 kr~gEKp~-C~~CgK~Fs~ks~Lk~H~R----EKPfkC~   39 (406)
                      .+.++++| |.+|+|.|.++..|++|++    +++|+|.
T Consensus         6 ~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (44)
T 2yu5_A            6 SGAGENPFKCSKCDRVFTQRNYLVQHERTHARKSGPSSG   44 (44)
T ss_dssp             CCSCCCSEECSSSSCEESSSHHHHHHHHHCCCCCSSCCC
T ss_pred             ccCCCCCeECCCCCchhCCHHHHHHHhHhcCCCCCCCCC
Confidence            34588888 9999999999999999998    8999984

>2en3_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.02  E-value=2.9e-06  Score=58.27  Aligned_cols=34  Identities=18%  Similarity=0.253  Sum_probs=30.5

Q ss_pred             cCCCCccc-cCccCcccCChHHHHHHhh----ccccccc
Q 015460            6 KRVSSKVW-CYYCDREFDDEKILVQHQK----AKHFKCH   39 (406)
Q Consensus         6 kr~gEKp~-C~~CgK~Fs~ks~Lk~H~R----EKPfkC~   39 (406)
                      .+.++++| |.+|+|.|.++..|++|++    +++|+|.
T Consensus         6 ~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C~   44 (46)
T 2en3_A            6 SGTGEKPFQCKECGMNFSWSCSLFKHLRSHERTDPSGPS   44 (46)
T ss_dssp             CSCCCCSEECSSSCCEESSSHHHHHHHHHHHHSCCSSCS
T ss_pred             ccCCCCCeeCcccChhhCCHHHHHHHHHHhCCCCCCCCC
Confidence            34578888 9999999999999999998    8999995

>1znf_A 31ST zinc finger from XFIN; zinc finger DNA binding domain; NMR {Xenopus laevis} SCOP: g.37.1.1

Probab=98.01  E-value=2.4e-06  Score=51.58  Aligned_cols=27  Identities=15%  Similarity=0.466  Sum_probs=23.0

Q ss_pred             ccccccccCccCCchhhHhhhhhhccC
Q 015460           35 HFKCHVCHKKLSTAGGMAIHVLQVHKE   61 (406)
Q Consensus        35 PfkC~~CgksFss~s~LkrH~rthHge   61 (406)
                      +|+|.+|++.|.++..|++|+++|+++
T Consensus         1 ~~~C~~C~k~f~~~~~l~~H~~~h~~~   27 (27)
T 1znf_A            1 XYKCGLCERSFVEKSALSRHQRVHKNX   27 (27)
T ss_dssp             -CBCSSSCCBCSSHHHHHHHGGGTCC-
T ss_pred             CccCCCCCCcCCCHHHHHHHHHHcCCC
Confidence            589999999999999999999888753

>1paa_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=98.00  E-value=2.7e-06  Score=52.52  Aligned_cols=29  Identities=14%  Similarity=0.313  Sum_probs=25.2

Q ss_pred             cccccccccCccCCchhhHhh-hhhhccCc
Q 015460           34 KHFKCHVCHKKLSTAGGMAIH-VLQVHKEN   62 (406)
Q Consensus        34 KPfkC~~CgksFss~s~LkrH-~rthHgek   62 (406)
                      |+|+|.+|++.|.+.+.|.+| ++.|++++
T Consensus         1 k~~~C~~C~k~f~~~~~l~~H~~~~H~~~~   30 (30)
T 1paa_A            1 KAYACGLCNRAFTRRDLLIRHAQKIHSGNL   30 (30)
T ss_dssp             CCSBCTTTCCBCSSSHHHHHHHTTTSCCCC
T ss_pred             CCcCCcccCcccCChHHHHHHHHHHccCCC
Confidence            589999999999999999999 67777653

>2epp_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=97.99  E-value=2.3e-06  Score=65.80  Aligned_cols=30  Identities=23%  Similarity=0.345  Sum_probs=27.9

Q ss_pred             ccccccccccCccCCchhhHhhhhhhccCc
Q 015460           33 AKHFKCHVCHKKLSTAGGMAIHVLQVHKEN   62 (406)
Q Consensus        33 EKPfkC~~CgksFss~s~LkrH~rthHgek   62 (406)
                      ||+|+|.+|+|.|.++.+|++|+++|++++
T Consensus        11 ekpy~C~~CgK~F~~~s~L~~H~r~Htg~~   40 (66)
T 2epp_A           11 AGILPCGLCGKVFTDANRLRQHEAQHGVTS   40 (66)
T ss_dssp             CCCCCCTTTCCCCSCHHHHHHHHHHHTTTS
T ss_pred             ccCcCCCCCCCccCCHHHHHhhhhhhCCCc
Confidence            899999999999999999999999998865

>2eox_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=97.96  E-value=2.6e-06  Score=57.91  Aligned_cols=34  Identities=26%  Similarity=0.384  Sum_probs=30.3

Q ss_pred             cCCCCccc-cCccCcccCChHHHHHHhh----ccccccc
Q 015460            6 KRVSSKVW-CYYCDREFDDEKILVQHQK----AKHFKCH   39 (406)
Q Consensus         6 kr~gEKp~-C~~CgK~Fs~ks~Lk~H~R----EKPfkC~   39 (406)
                      .+.++++| |.+|++.|.+...|.+|++    +++|+|.
T Consensus         6 ~H~~~~~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C~   44 (44)
T 2eox_A            6 SGTDSKSYNCNECGKAFTRIFHLTRHQKIHTRKSGPSSG   44 (44)
T ss_dssp             CCCCCCCEEETTTTEEESSSHHHHTTHHHHCCCCCCSCC
T ss_pred             CCCCCCCeECcccCcccCCHHHHHHHHHHhCCCCCCCCC
Confidence            34578888 9999999999999999998    8999984

>2eoy_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=97.94  E-value=5e-06  Score=57.17  Aligned_cols=35  Identities=26%  Similarity=0.453  Sum_probs=30.2

Q ss_pred             cCCCCccc-cCccCcccCChHHHHHHhh-----cccccccc
Q 015460            6 KRVSSKVW-CYYCDREFDDEKILVQHQK-----AKHFKCHV   40 (406)
Q Consensus         6 kr~gEKp~-C~~CgK~Fs~ks~Lk~H~R-----EKPfkC~~   40 (406)
                      .+.++++| |.+|+|.|.++..|++|++     +|+|+|.+
T Consensus         6 ~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~~C~~   46 (46)
T 2eoy_A            6 SGQKEKCFKCNKCEKTFSCSKYLTQHERIHTRGVKSGPSSG   46 (46)
T ss_dssp             CCCCSCCEECSSSCCEESSSHHHHHHHTTCCSCCTTSSSCC
T ss_pred             ccCCCCCEECcCCCCcCCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            34578888 9999999999999999988     47899863

>2epv_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=97.94  E-value=5.9e-06  Score=56.34  Aligned_cols=34  Identities=18%  Similarity=0.372  Sum_probs=30.1

Q ss_pred             cCCCCccc-cCccCcccCChHHHHHHhh----ccccccc
Q 015460            6 KRVSSKVW-CYYCDREFDDEKILVQHQK----AKHFKCH   39 (406)
Q Consensus         6 kr~gEKp~-C~~CgK~Fs~ks~Lk~H~R----EKPfkC~   39 (406)
                      .+.++++| |.+|+|.|.+...|++|++    +|+|.|.
T Consensus         6 ~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~~g   44 (44)
T 2epv_A            6 SGSGEKPYECNECGKAFIWKSLLIVHERTHAGVSGPSSG   44 (44)
T ss_dssp             CCCCCCSEECSSSCCEESSHHHHHHHHGGGSSCSCCCCC
T ss_pred             ccCCCcCeECCCCCcccCchHHHHHHHhHhcCCCCCCCC
Confidence            44578888 9999999999999999998    8999873

>1fv5_A First zinc finger of U-shaped; CCHC, protein interaction, transcription; NMR {Drosophila melanogaster} SCOP: g.37.1.2 PDB: 1y0j_B 2l6z_B

Probab=97.93  E-value=2.5e-06  Score=57.90  Aligned_cols=23  Identities=22%  Similarity=0.483  Sum_probs=11.3

Q ss_pred             ccccccccccCccCCchhhHhhh
Q 015460           33 AKHFKCHVCHKKLSTAGGMAIHV   55 (406)
Q Consensus        33 EKPfkC~~CgksFss~s~LkrH~   55 (406)
                      ||+|+|.+|+|+|.++++|++|+
T Consensus         6 ekp~~C~~CgK~F~~~s~L~~H~   28 (36)
T 1fv5_A            6 PARFMCLPCGIAFSSPSTLEAHQ   28 (36)
T ss_dssp             CCCCEETTTTEECSCHHHHHHHH
T ss_pred             ccCeECCCCCCccCCHhHccCcC
Confidence            44444544555555554444444

>2d9k_A FLN29 gene product; zinc finger, ZF-TRAF, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=97.92  E-value=5.5e-07  Score=70.05  Aligned_cols=62  Identities=15%  Similarity=0.071  Sum_probs=49.7

Q ss_pred             HHHHHHhh----ccccccccccCccCCchhhHhhhhhhccCcccccCCCCCCCCccceeecCCCCCCHhHHHHHhhhccC
Q 015460           25 KILVQHQK----AKHFKCHVCHKKLSTAGGMAIHVLQVHKENVTKVPNAKPGRESTDIEIYGMQGIPPDVLAAHYGEEEE  100 (406)
Q Consensus        25 s~Lk~H~R----EKPfkC~~CgksFss~s~LkrH~rthHgek~~~Cp~~~~~r~s~~c~iCG~~fi~~~~L~~H~k~he~  100 (406)
                      ..|..|++    +|++.|..|++.|. ...|..|+ .|.+++++.|            ..|++.|. ..+|..|++.|..
T Consensus         3 ~~L~~H~~~~c~~r~~~C~~C~~~~~-~~~L~~H~-~~c~~~~~~C------------~~C~~~~~-~~~l~~H~~~c~~   67 (75)
T 2d9k_A            3 SGSSGHEETECPLRLAVCQHCDLELS-ILKLKEHE-DYCGARTELC------------GNCGRNVL-VKDLKTHPEVCGR   67 (75)
T ss_dssp             CCCSCCCCCCCCCCCEECSSSCCEEC-HHHHHHHH-HHHHHCEEEC------------SSSCCEEE-TTGGGTHHHHBTT
T ss_pred             hHHHhhCcccCCCcccCCcccChHhh-HHHHHHHH-hHcCCCceEc------------ccCCCcCc-HHHHHHHHHHccC
Confidence            45667766    89999999999994 89999998 8888876655            44778755 5889999988876


Q ss_pred             C
Q 015460          101 V  101 (406)
Q Consensus       101 ~  101 (406)
                      .
T Consensus        68 ~   68 (75)
T 2d9k_A           68 E   68 (75)
T ss_dssp             B
T ss_pred             C
Confidence            3

>1fv5_A First zinc finger of U-shaped; CCHC, protein interaction, transcription; NMR {Drosophila melanogaster} SCOP: g.37.1.2 PDB: 1y0j_B 2l6z_B

Probab=97.92  E-value=4e-06  Score=56.88  Aligned_cols=31  Identities=23%  Similarity=0.517  Sum_probs=27.7

Q ss_pred             CCCCccc-cCccCcccCChHHHHHHhhcccccccc
Q 015460            7 RVSSKVW-CYYCDREFDDEKILVQHQKAKHFKCHV   40 (406)
Q Consensus         7 r~gEKp~-C~~CgK~Fs~ks~Lk~H~REKPfkC~~   40 (406)
                      ..+||+| |.+|||+|.++++|++|+   +|+|.+
T Consensus         3 ~~gekp~~C~~CgK~F~~~s~L~~H~---py~C~~   34 (36)
T 1fv5_A            3 LLKPARFMCLPCGIAFSSPSTLEAHQ---AYYCSH   34 (36)
T ss_dssp             SSSCCCCEETTTTEECSCHHHHHHHH---HHTSTT
T ss_pred             CCCccCeECCCCCCccCCHhHccCcC---CeECcC
Confidence            3588999 999999999999999997   788865

>2elm_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=97.90  E-value=3e-06  Score=55.80  Aligned_cols=32  Identities=16%  Similarity=0.292  Sum_probs=25.8

Q ss_pred             HhhccccccccccCccCCchhhHhh-hhhhccC
Q 015460           30 HQKAKHFKCHVCHKKLSTAGGMAIH-VLQVHKE   61 (406)
Q Consensus        30 H~REKPfkC~~CgksFss~s~LkrH-~rthHge   61 (406)
                      |..+|+|+|++|++.|.++++|++| ++.|+++
T Consensus         4 H~~~k~~~C~~C~k~f~~~~~L~~H~~~~H~~~   36 (37)
T 2elm_A            4 GSSGHLYYCSQCHYSSITKNCLKRHVIQKHSNI   36 (37)
T ss_dssp             SSSSCEEECSSSSCEEECHHHHHHHHHHHTCCC
T ss_pred             cCCCcCeECCCCCcccCCHHHHHHHHHHHccCc
Confidence            3337889999999999999999999 7777653

>1va1_A Transcription factor SP1; C2H2 type zinc finger, DNA-binding protein; NMR {Homo sapiens}

Probab=97.90  E-value=3.5e-06  Score=55.46  Aligned_cols=30  Identities=23%  Similarity=0.433  Sum_probs=26.4

Q ss_pred             cccccccc--ccCccCCchhhHhhhhhhccCc
Q 015460           33 AKHFKCHV--CHKKLSTAGGMAIHVLQVHKEN   62 (406)
Q Consensus        33 EKPfkC~~--CgksFss~s~LkrH~rthHgek   62 (406)
                      +|+|+|.+  |++.|.+.+.|++|+++|++++
T Consensus         6 ~k~~~C~~~~C~k~f~~~~~L~~H~~~H~~ek   37 (37)
T 1va1_A            6 KKQHICHIQGCGKVYGKTSHLRAHLRWHTGER   37 (37)
T ss_dssp             CCCEECCSTTCCCEESCHHHHHHHHHHHHTTC
T ss_pred             CCCCCCCCCCCCCccCCHHHHHHHHHhcCCCC
Confidence            78999984  9999999999999999888764

>2lvu_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, transcription; NMR {Homo sapiens}

Probab=97.12  E-value=1.6e-06  Score=52.26  Aligned_cols=25  Identities=24%  Similarity=0.553  Sum_probs=22.4

Q ss_pred             cccccccccCccCCchhhHhhhhhh
Q 015460           34 KHFKCHVCHKKLSTAGGMAIHVLQV   58 (406)
Q Consensus        34 KPfkC~~CgksFss~s~LkrH~rth   58 (406)
                      |+|+|.+|++.|.+.+.|++|+++|
T Consensus         1 kp~~C~~C~k~f~~~~~l~~H~~~H   25 (26)
T 2lvu_A            1 KPYVCERCGKRFVQSSQLANHIRHH   25 (26)
Confidence            6899999999999999999998776

>1yui_A GAGA-factor; complex (DNA-binding protein/DNA), chromatin remodeling, DNA binding protein/DNA complex; HET: DNA; NMR {Drosophila melanogaster} SCOP: g.37.1.1 PDB: 1yuj_A*

Probab=97.84  E-value=3.8e-06  Score=60.11  Aligned_cols=47  Identities=13%  Similarity=-0.036  Sum_probs=41.2

Q ss_pred             cCccCCchhhHhhhhhhccCcccccCCCCCCCCccceeecCCCCCCHhHHHHHhhhccC
Q 015460           42 HKKLSTAGGMAIHVLQVHKENVTKVPNAKPGRESTDIEIYGMQGIPPDVLAAHYGEEEE  100 (406)
Q Consensus        42 gksFss~s~LkrH~rthHgek~~~Cp~~~~~r~s~~c~iCG~~fi~~~~L~~H~k~he~  100 (406)
                      +|.|.+...|..|+++|.++++|            .|++||+.|.....|..|++.|.+
T Consensus         3 ~k~~~~~~~l~~h~~~H~~~k~~------------~C~~C~k~f~~~~~L~~H~~~H~~   49 (54)
T 1yui_A            3 AKRAKHPPGTEKPRSRSQSEQPA------------TCPICYAVIRQSRNLRRHLELRHF   49 (54)
T ss_dssp             CCCCSCSSCCCCCHHHHTSSCCE------------ECTTTCCEESSHHHHHHHHHHHTT
T ss_pred             ccccCCCcchhhHHHhcCCCCCc------------cCCCCCcccCCHHHHHHHHHHhcc
Confidence            47899999999999999887754            556799999999999999999875

>1njq_A Superman protein; zinc-finger, peptide-zinc complex, beta-BETA-ALFA motif, metal binding protein; NMR {Synthetic} SCOP: g.37.1.3 PDB: 2l1o_A

Probab=97.81  E-value=1e-05  Score=53.58  Aligned_cols=32  Identities=22%  Similarity=0.465  Sum_probs=28.2

Q ss_pred             CCCccc-cCccCcccCChHHHHHHhh----ccccccc
Q 015460            8 VSSKVW-CYYCDREFDDEKILVQHQK----AKHFKCH   39 (406)
Q Consensus         8 ~gEKp~-C~~CgK~Fs~ks~Lk~H~R----EKPfkC~   39 (406)
                      .++++| |.+|||.|...+.|++|++    +|+|.|.
T Consensus         2 ~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~~~   38 (39)
T 1njq_A            2 WPPRSYTCSFCKREFRSAQALGGHMNVHRRDRARLRL   38 (39)
T ss_dssp             CCSSSEECTTTCCEESSHHHHHHHHHTTCCSCTTTTC
T ss_pred             CCCCceECCCCCcccCCHHHHHHHHHHcCCCccceec
Confidence            367888 9999999999999999998    8888763

>1ncs_A Peptide M30F, transcriptional factor SWI5; DNA binding motif, transcription regulation, zinc-finger; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=97.78  E-value=3.4e-06  Score=58.83  Aligned_cols=30  Identities=20%  Similarity=0.414  Sum_probs=27.4

Q ss_pred             ccccccc--cccCccCCchhhHhhhhhhccCc
Q 015460           33 AKHFKCH--VCHKKLSTAGGMAIHVLQVHKEN   62 (406)
Q Consensus        33 EKPfkC~--~CgksFss~s~LkrH~rthHgek   62 (406)
                      +|+|+|.  .|++.|.++++|++|+++|++++
T Consensus        16 ~k~~~C~~~~C~k~F~~~~~L~~H~~~H~~ek   47 (47)
T 1ncs_A           16 DKTFECLFPGCTKTFKRRYNIRSHIQTHLEDR   47 (47)
T ss_dssp             TTEEECCCTTCCCEECSSSSHHHHHHHHTTTC
T ss_pred             CCCeECCCCCCCCccCCHHHHHHHHHHccCCC
Confidence            8999996  69999999999999999998764

>2ab3_A ZNF29; zinc finger protein, beta BETA alpha, RREIIB-TR, RNA binding protein; NMR {Escherichia coli} SCOP: k.12.1.1 PDB: 2ab7_A

Probab=97.64  E-value=1.5e-05  Score=48.53  Aligned_cols=27  Identities=15%  Similarity=0.315  Sum_probs=23.5

Q ss_pred             cccccc--cccCccCCchhhHhhhhhhcc
Q 015460           34 KHFKCH--VCHKKLSTAGGMAIHVLQVHK   60 (406)
Q Consensus        34 KPfkC~--~CgksFss~s~LkrH~rthHg   60 (406)
                      |+|+|.  .|++.|.+.+.|++|+++|++
T Consensus         1 k~~~C~~~~C~k~f~~~~~l~~H~~~H~~   29 (29)
T 2ab3_A            1 MVYVCHFENCGRSFNDRRKLNRHKKIHTG   29 (29)
T ss_dssp             CCEEECSTTTCEEESSHHHHHHHHGGGTC
T ss_pred             CCCCCcCCcCcCccCCHHHHHHHHHHhCC
Confidence            578999  999999999999999988753

>1x3c_A Zinc finger protein 292; DNA binding, nuclear protein, C2H2-type zinc finger, KIAA0530, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=97.63  E-value=3.4e-05  Score=60.43  Aligned_cols=33  Identities=15%  Similarity=0.188  Sum_probs=29.6

Q ss_pred             CCCccc-cCc--cCcccCChHHHHHHh-h----cccccccc
Q 015460            8 VSSKVW-CYY--CDREFDDEKILVQHQ-K----AKHFKCHV   40 (406)
Q Consensus         8 ~gEKp~-C~~--CgK~Fs~ks~Lk~H~-R----EKPfkC~~   40 (406)
                      .+||+| |.+  |+|+|.++++|++|+ +    ||||.|..
T Consensus        23 sGEKPYkC~~~~CgKaFsr~s~L~~H~rriHTgEKP~~~~~   63 (73)
T 1x3c_A           23 SPYRPYRCVHQGCFAAFTIQQNLILHYQAVHKSDLPAFSAE   63 (73)
T ss_dssp             CSSCSCBCCSTTCCCBCSSHHHHHHHHHHHSSSCCCCCCCS
T ss_pred             cCCCCeECCCCCcChhHcCHHHHHHHhhhhCCCCCCccccc
Confidence            489999 976  999999999999997 4    99999975

>1rim_A E6APC2 peptide; E6-binding domain, zinc finger, human papillomavirus, HPV E6 protein, de novo protein; NMR {Synthetic} SCOP: k.12.1.1

Probab=97.54  E-value=4.7e-05  Score=48.78  Aligned_cols=28  Identities=18%  Similarity=0.299  Sum_probs=24.2

Q ss_pred             ccc-cCccCcccCChHHHHHHhh----cccccc
Q 015460           11 KVW-CYYCDREFDDEKILVQHQK----AKHFKC   38 (406)
Q Consensus        11 Kp~-C~~CgK~Fs~ks~Lk~H~R----EKPfkC   38 (406)
                      ++| |.+|||.|...+.|.+|++    +++|.+
T Consensus         1 kp~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~r   33 (33)
T 1rim_A            1 YKFACPECPKRFMRSDHLSKHITLHELLGEERR   33 (33)
T ss_dssp             CCCCCSSSCCCCSSHHHHHHHHHHHTTTCCCCC
T ss_pred             CcccCCCCCchhCCHHHHHHHHHHhCCCCCCCC
Confidence            356 9999999999999999998    777753

>2elo_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=97.46  E-value=7e-05  Score=48.51  Aligned_cols=26  Identities=23%  Similarity=0.741  Sum_probs=23.8

Q ss_pred             CCCCccc-cCccCcccCChHHHHHHhh
Q 015460            7 RVSSKVW-CYYCDREFDDEKILVQHQK   32 (406)
Q Consensus         7 r~gEKp~-C~~CgK~Fs~ks~Lk~H~R   32 (406)
                      +.++++| |.+|+|.|.++..|++|++
T Consensus         4 h~~~k~~~C~~C~k~f~~~~~l~~H~~   30 (37)
T 2elo_A            4 GSSGRSYSCPVCEKSFSEDRLIKSHIK   30 (37)
T ss_dssp             CCCCCCCEETTTTEECSSHHHHHHHHH
T ss_pred             CCCCCCcCCCCCCCccCCHHHHHHHHH
Confidence            4578888 9999999999999999987

>2elx_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}

Probab=97.44  E-value=7.7e-05  Score=47.47  Aligned_cols=25  Identities=24%  Similarity=0.434  Sum_probs=23.0

Q ss_pred             CCCccc-cCccCcccCChHHHHHHhh
Q 015460            8 VSSKVW-CYYCDREFDDEKILVQHQK   32 (406)
Q Consensus         8 ~gEKp~-C~~CgK~Fs~ks~Lk~H~R   32 (406)
                      .++++| |.+|+|.|.++..|++|++
T Consensus         3 ~~~k~~~C~~C~k~f~~~~~L~~H~~   28 (35)
T 2elx_A            3 SGSSGYVCALCLKKFVSSIRLRSHIR   28 (35)
T ss_dssp             CCCCSEECSSSCCEESSHHHHHHHHH
T ss_pred             CCCCCeECCCCcchhCCHHHHHHHHH
Confidence            477888 9999999999999999987

>2epp_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=97.42  E-value=0.00016  Score=55.36  Aligned_cols=38  Identities=18%  Similarity=0.322  Sum_probs=31.0

Q ss_pred             CCCCccc-cCccCcccCChHHHHHHhh---ccccccccccCc
Q 015460            7 RVSSKVW-CYYCDREFDDEKILVQHQK---AKHFKCHVCHKK   44 (406)
Q Consensus         7 r~gEKp~-C~~CgK~Fs~ks~Lk~H~R---EKPfkC~~Cgks   44 (406)
                      ..++|+| |.+|+|.|.++..|++|++   .....|.+|+..
T Consensus         8 ~~~ekpy~C~~CgK~F~~~s~L~~H~r~Htg~~~~~~~~~~~   49 (66)
T 2epp_A            8 LREAGILPCGLCGKVFTDANRLRQHEAQHGVTSLQLGYIDLP   49 (66)
T ss_dssp             CCCCCCCCCTTTCCCCSCHHHHHHHHHHHTTTSCCCCSCCCC
T ss_pred             CCCccCcCCCCCCCccCCHHHHHhhhhhhCCCccccccccCC
Confidence            4478889 9999999999999999999   445667777653

>1srk_A Zinc finger protein ZFPM1; classical zinc finger, transcription; NMR {Mus musculus} SCOP: g.37.1.1

Probab=97.38  E-value=0.0001  Score=47.07  Aligned_cols=25  Identities=20%  Similarity=0.441  Sum_probs=23.1

Q ss_pred             CCCccc-cCccCcccCChHHHHHHhh
Q 015460            8 VSSKVW-CYYCDREFDDEKILVQHQK   32 (406)
Q Consensus         8 ~gEKp~-C~~CgK~Fs~ks~Lk~H~R   32 (406)
                      .++++| |.+|+|.|..+..|.+|++
T Consensus         3 ~~~k~~~C~~C~k~f~~~~~l~~H~~   28 (35)
T 1srk_A            3 SGKRPFVCRICLSAFTTKANCARHLK   28 (35)
T ss_dssp             SCCSCEECSSSCCEESSHHHHHHHHG
T ss_pred             CCCcCeeCCCCCcccCCHHHHHHHHH
Confidence            477888 9999999999999999987

>1p7a_A BF3, BKLF, kruppel-like factor 3; classical zinc finger, transcription factor, DNA binding protein; NMR {Mus musculus} SCOP: g.37.1.1 PDB: 1u85_A 1u86_A

Probab=97.33  E-value=0.00015  Score=46.91  Aligned_cols=27  Identities=33%  Similarity=0.592  Sum_probs=24.1

Q ss_pred             cCCCCccc-cCccCcccCChHHHHHHhh
Q 015460            6 KRVSSKVW-CYYCDREFDDEKILVQHQK   32 (406)
Q Consensus         6 kr~gEKp~-C~~CgK~Fs~ks~Lk~H~R   32 (406)
                      ...++++| |.+|+|.|.++..|.+|++
T Consensus         5 ~h~~~k~~~C~~C~k~f~~~~~l~~H~~   32 (37)
T 1p7a_A            5 GSTGIKPFQCPDCDRSFSRSDHLALHRK   32 (37)
T ss_dssp             TTCCSSSBCCTTTCCCBSSHHHHHHHHG
T ss_pred             cCCCCCCccCCCCCcccCcHHHHHHHHH
Confidence            34588888 9999999999999999986

>2kvh_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=97.23  E-value=0.00014  Score=43.78  Aligned_cols=23  Identities=22%  Similarity=0.521  Sum_probs=20.8

Q ss_pred             Cccc-cCccCcccCChHHHHHHhh
Q 015460           10 SKVW-CYYCDREFDDEKILVQHQK   32 (406)
Q Consensus        10 EKp~-C~~CgK~Fs~ks~Lk~H~R   32 (406)
                      |++| |.+|||.|.....|++|++
T Consensus         1 ek~~~C~~C~k~f~~~~~l~~H~~   24 (27)
T 2kvh_A            1 EKPFSCSLCPQRSRDFSAMTKHLR   24 (27)
T ss_dssp             CCCEECSSSSCEESSHHHHHHHHH
T ss_pred             CcCccCCCcChhhCCHHHHHHHHH
Confidence            4677 9999999999999999975

>2kvg_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=97.21  E-value=0.00013  Score=44.21  Aligned_cols=23  Identities=13%  Similarity=0.349  Sum_probs=20.8

Q ss_pred             Cccc-cCccCcccCChHHHHHHhh
Q 015460           10 SKVW-CYYCDREFDDEKILVQHQK   32 (406)
Q Consensus        10 EKp~-C~~CgK~Fs~ks~Lk~H~R   32 (406)
                      +++| |.+|||.|.+.+.|++|++
T Consensus         1 ~k~~~C~~C~k~f~~~~~l~~H~~   24 (27)
T 2kvg_A            1 AAPYRCPLCRAGCPSLASMQAHMR   24 (27)
T ss_dssp             CCTEEETTTTEEESCHHHHHHHHT
T ss_pred             CcCcCCCCCCcccCCHHHHHHHHH
Confidence            4677 9999999999999999975

>1bhi_A CRE-BP1, ATF-2; CRE binding protein, transcriptional activation domain, Zn finger, DNA-binding regulatory protein; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=97.20  E-value=0.0002  Score=46.69  Aligned_cols=29  Identities=28%  Similarity=0.598  Sum_probs=25.2

Q ss_pred             CCCccc-cC--ccCcccCChHHHHHHhh----cccc
Q 015460            8 VSSKVW-CY--YCDREFDDEKILVQHQK----AKHF   36 (406)
Q Consensus         8 ~gEKp~-C~--~CgK~Fs~ks~Lk~H~R----EKPf   36 (406)
                      .++++| |.  .|+|.|.+++.|++|++    +|+|
T Consensus         2 ~~~k~~~C~~~~C~k~f~~~~~L~~H~~~H~~~k~~   37 (38)
T 1bhi_A            2 SDDKPFLCTAPGCGQRFTNEDHLAVHKHKHEMTLKF   37 (38)
T ss_dssp             TTCCCEECCCTTTCCEESSHHHHHHHHHHHHTTTTT
T ss_pred             CCCcceECCCCCCCcccCCHHHHHHHHHHhCCCCCC
Confidence            467888 99  59999999999999988    6665

>2elm_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=97.19  E-value=0.00016  Score=47.27  Aligned_cols=26  Identities=19%  Similarity=0.373  Sum_probs=23.4

Q ss_pred             CCCCccc-cCccCcccCChHHHHHH-hh
Q 015460            7 RVSSKVW-CYYCDREFDDEKILVQH-QK   32 (406)
Q Consensus         7 r~gEKp~-C~~CgK~Fs~ks~Lk~H-~R   32 (406)
                      +.++++| |.+|+|.|..+..|++| ++
T Consensus         4 H~~~k~~~C~~C~k~f~~~~~L~~H~~~   31 (37)
T 2elm_A            4 GSSGHLYYCSQCHYSSITKNCLKRHVIQ   31 (37)
T ss_dssp             SSSSCEEECSSSSCEEECHHHHHHHHHH
T ss_pred             cCCCcCeECCCCCcccCCHHHHHHHHHH
Confidence            4578889 99999999999999999 65

>2elr_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=97.13  E-value=0.00031  Score=44.96  Aligned_cols=26  Identities=27%  Similarity=0.544  Sum_probs=23.4

Q ss_pred             CCCCccc-cCccCcccCChHHHHHHhh
Q 015460            7 RVSSKVW-CYYCDREFDDEKILVQHQK   32 (406)
Q Consensus         7 r~gEKp~-C~~CgK~Fs~ks~Lk~H~R   32 (406)
                      +.++++| |.+|+|.|..+..|.+|++
T Consensus         4 h~~~~~~~C~~C~k~f~~~~~l~~H~~   30 (36)
T 2elr_A            4 GSSGKTHLCDMCGKKFKSKGTLKSHKL   30 (36)
T ss_dssp             CCCCSSCBCTTTCCBCSSHHHHHHHHH
T ss_pred             CCCCCCeecCcCCCCcCchHHHHHHHH
Confidence            4577888 9999999999999999987

>3iuf_A Zinc finger protein UBI-D4; structural genomics consortium (SGC), C2H2, APO metal-binding, nucleus, phosphoprotein, transcription, TRAN regulation; 1.80A {Homo sapiens}

Probab=97.13  E-value=0.0002  Score=50.00  Aligned_cols=26  Identities=19%  Similarity=0.441  Sum_probs=23.5

Q ss_pred             CCCCccc-cCccCcccCChHHHHHHhh
Q 015460            7 RVSSKVW-CYYCDREFDDEKILVQHQK   32 (406)
Q Consensus         7 r~gEKp~-C~~CgK~Fs~ks~Lk~H~R   32 (406)
                      +.++|+| |.+|||.|.++..|++|++
T Consensus         2 Ht~~kp~~C~~C~k~F~~~~~L~~H~~   28 (48)
T 3iuf_A            2 EDRDKPYACDICGKRYKNRPGLSYHYA   28 (48)
T ss_dssp             CTTTSCEECTTTCCEESSHHHHHHHHH
T ss_pred             CCCCcCEECCCcCcccCCHHHHHHHhh
Confidence            3578889 9999999999999999976

>2elt_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=97.13  E-value=0.00025  Score=45.40  Aligned_cols=26  Identities=23%  Similarity=0.277  Sum_probs=23.6

Q ss_pred             CCCCccc-cCccCcccCChHHHHHHhh
Q 015460            7 RVSSKVW-CYYCDREFDDEKILVQHQK   32 (406)
Q Consensus         7 r~gEKp~-C~~CgK~Fs~ks~Lk~H~R   32 (406)
                      +.++++| |.+|++.|..+..|.+|++
T Consensus         4 h~~~k~~~C~~C~k~f~~~~~l~~H~~   30 (36)
T 2elt_A            4 GSSGKPYKCPQCSYASAIKANLNVHLR   30 (36)
T ss_dssp             SCCCCSEECSSSSCEESSHHHHHHHHH
T ss_pred             CCCCCCCCCCCCCcccCCHHHHHHHHH
Confidence            4578888 9999999999999999987

>2eln_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=97.12  E-value=0.00023  Score=48.43  Aligned_cols=26  Identities=31%  Similarity=0.378  Sum_probs=23.5

Q ss_pred             CCCCccc-cCc--cCcccCChHHHHHHhh
Q 015460            7 RVSSKVW-CYY--CDREFDDEKILVQHQK   32 (406)
Q Consensus         7 r~gEKp~-C~~--CgK~Fs~ks~Lk~H~R   32 (406)
                      +.+||+| |.+  |+|.|.+++.|++|++
T Consensus         4 ~~gekp~~C~~~~C~k~F~~~~~L~~H~r   32 (38)
T 2eln_A            4 GSSGILLKCPTDGCDYSTPDKYKLQAHLK   32 (38)
T ss_dssp             SSCCCCEECSSSSCCCEESCHHHHHHHHH
T ss_pred             CCCCCCCCCCCCCCCCccCCHHHHHHHHH
Confidence            4588999 986  9999999999999987

>2elv_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=97.11  E-value=0.00026  Score=45.49  Aligned_cols=26  Identities=27%  Similarity=0.511  Sum_probs=23.5

Q ss_pred             CCCCccc-cCccCcccCChHHHHHHhh
Q 015460            7 RVSSKVW-CYYCDREFDDEKILVQHQK   32 (406)
Q Consensus         7 r~gEKp~-C~~CgK~Fs~ks~Lk~H~R   32 (406)
                      +.++++| |.+|++.|..+..|.+|++
T Consensus         4 h~~~k~~~C~~C~k~f~~~~~l~~H~~   30 (36)
T 2elv_A            4 GSSGLLYDCHICERKFKNELDRDRHML   30 (36)
T ss_dssp             SCCCCCEECSSSCCEESSHHHHHHHHT
T ss_pred             CCCCCCeECCCCCCccCCHHHHHHHHH
Confidence            4577888 9999999999999999986

>2kvf_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=97.10  E-value=0.00023  Score=42.90  Aligned_cols=23  Identities=17%  Similarity=0.553  Sum_probs=20.8

Q ss_pred             Cccc-cCccCcccCChHHHHHHhh
Q 015460           10 SKVW-CYYCDREFDDEKILVQHQK   32 (406)
Q Consensus        10 EKp~-C~~CgK~Fs~ks~Lk~H~R   32 (406)
                      +++| |.+|+|.|.....|.+|++
T Consensus         1 ~k~~~C~~C~k~f~~~~~l~~H~~   24 (28)
T 2kvf_A            1 MRPYSCSVCGKRFSLKHQMETHYR   24 (28)
T ss_dssp             CCSEECSSSCCEESCHHHHHHHHT
T ss_pred             CcCccCCCCCcccCCHHHHHHHHH
Confidence            4677 9999999999999999976

>2elq_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=97.10  E-value=0.0003  Score=45.20  Aligned_cols=26  Identities=23%  Similarity=0.411  Sum_probs=23.7

Q ss_pred             CCCCccc-cCccCcccCChHHHHHHhh
Q 015460            7 RVSSKVW-CYYCDREFDDEKILVQHQK   32 (406)
Q Consensus         7 r~gEKp~-C~~CgK~Fs~ks~Lk~H~R   32 (406)
                      +.++++| |.+|++.|.....|++|++
T Consensus         4 h~~~k~~~C~~C~k~f~~~~~l~~H~~   30 (36)
T 2elq_A            4 GSSGKPFKCSLCEYATRSKSNLKAHMN   30 (36)
T ss_dssp             SCCCCSEECSSSSCEESCHHHHHHHHH
T ss_pred             CCCCCCccCCCCCchhCCHHHHHHHHH
Confidence            4578888 9999999999999999987

>2elp_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=97.02  E-value=0.00034  Score=45.22  Aligned_cols=26  Identities=31%  Similarity=0.452  Sum_probs=23.4

Q ss_pred             CCCCccc-cCccCcccCCh-HHHHHHhh
Q 015460            7 RVSSKVW-CYYCDREFDDE-KILVQHQK   32 (406)
Q Consensus         7 r~gEKp~-C~~CgK~Fs~k-s~Lk~H~R   32 (406)
                      +.++++| |.+|++.|.++ ..|++|++
T Consensus         4 h~~~k~~~C~~C~k~f~~~~~~L~~H~~   31 (37)
T 2elp_A            4 GSSGRAMKCPYCDFYFMKNGSDLQRHIW   31 (37)
T ss_dssp             CCCCCCEECSSSSCEECSSCHHHHHHHH
T ss_pred             CCCCCCeECCCCChhhccCHHHHHHHHH
Confidence            4578888 99999999999 99999986

>2els_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=97.00  E-value=0.00036  Score=44.85  Aligned_cols=26  Identities=31%  Similarity=0.692  Sum_probs=23.3

Q ss_pred             CCCCccc-cCccCcccCChHHHHHHhh
Q 015460            7 RVSSKVW-CYYCDREFDDEKILVQHQK   32 (406)
Q Consensus         7 r~gEKp~-C~~CgK~Fs~ks~Lk~H~R   32 (406)
                      +.++++| |.+|+|.|.....|.+|++
T Consensus         4 ~~~~k~~~C~~C~k~f~~~~~l~~H~~   30 (36)
T 2els_A            4 GSSGKIFTCEYCNKVFKFKHSLQAHLR   30 (36)
T ss_dssp             TSCCCCEECTTTCCEESSHHHHHHHHH
T ss_pred             CCCCCCEECCCCCceeCCHHHHHHHHH
Confidence            3467888 9999999999999999987

>2kfq_A FP1; protein, de novo protein; NMR {Synthetic}

Probab=96.99  E-value=5.1e-05  Score=48.18  Aligned_cols=26  Identities=23%  Similarity=0.471  Sum_probs=22.7

Q ss_pred             ccc-cCccCcccCChHHHHHHhh----cccc
Q 015460           11 KVW-CYYCDREFDDEKILVQHQK----AKHF   36 (406)
Q Consensus        11 Kp~-C~~CgK~Fs~ks~Lk~H~R----EKPf   36 (406)
                      ++| |.+|||.|.+++.|++|++    +|+|
T Consensus         1 kp~~C~~C~k~f~~~~~L~~H~~~H~~~kp~   31 (32)
T 2kfq_A            1 YAFACPACPKRFMRSDALSKHIKTAFIVVAL   31 (32)
T ss_dssp             CCSSSSSSCTTHHHHHTTSSSTTSSSSSSSC
T ss_pred             CCCCCCCCCcccCCHHHHHHHHHHHccCCCC
Confidence            356 9999999999999999988    6665

>2m0d_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=96.92  E-value=0.0004  Score=41.97  Aligned_cols=23  Identities=35%  Similarity=0.778  Sum_probs=20.9

Q ss_pred             Cccc-cCccCcccCChHHHHHHhh
Q 015460           10 SKVW-CYYCDREFDDEKILVQHQK   32 (406)
Q Consensus        10 EKp~-C~~CgK~Fs~ks~Lk~H~R   32 (406)
                      +++| |.+||+.|.....|.+|++
T Consensus         1 ~k~~~C~~C~~~f~~~~~l~~H~~   24 (30)
T 2m0d_A            1 MKPYQCDYCGRSFSDPTSKMRHLE   24 (30)
T ss_dssp             CCCEECTTTCCEESCHHHHHHHHH
T ss_pred             CcCccCCCCCcccCCHHHHHHHHH
Confidence            4677 9999999999999999986

>2lvu_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, transcription; NMR {Homo sapiens}

Probab=95.85  E-value=0.00019  Score=42.76  Aligned_cols=22  Identities=27%  Similarity=0.640  Sum_probs=19.8

Q ss_pred             ccc-cCccCcccCChHHHHHHhh
Q 015460           11 KVW-CYYCDREFDDEKILVQHQK   32 (406)
Q Consensus        11 Kp~-C~~CgK~Fs~ks~Lk~H~R   32 (406)
                      |+| |.+|||.|.+...|++|++
T Consensus         1 kp~~C~~C~k~f~~~~~l~~H~~   23 (26)
T 2lvu_A            1 KPYVCERCGKRFVQSSQLANHIR   23 (26)
Confidence            356 9999999999999999975

>1ard_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 PDB: 1arf_A 1are_A

Probab=96.75  E-value=0.00075  Score=40.59  Aligned_cols=21  Identities=29%  Similarity=0.705  Sum_probs=19.5

Q ss_pred             cc-cCccCcccCChHHHHHHhh
Q 015460           12 VW-CYYCDREFDDEKILVQHQK   32 (406)
Q Consensus        12 p~-C~~CgK~Fs~ks~Lk~H~R   32 (406)
                      +| |.+||+.|.....|.+|++
T Consensus         2 ~~~C~~C~~~f~~~~~l~~H~~   23 (29)
T 1ard_A            2 SFVCEVCTRAFARQEHLKRHYR   23 (29)
T ss_dssp             CCBCTTTCCBCSSHHHHHHHHH
T ss_pred             CeECCCCCcccCCHHHHHHHHH
Confidence            46 9999999999999999986

>1klr_A Zinc finger Y-chromosomal protein; transcription; NMR {Synthetic} SCOP: g.37.1.1 PDB: 5znf_A 1kls_A 1xrz_A* 7znf_A

Probab=96.73  E-value=0.00083  Score=40.51  Aligned_cols=21  Identities=33%  Similarity=0.664  Sum_probs=19.5

Q ss_pred             cc-cCccCcccCChHHHHHHhh
Q 015460           12 VW-CYYCDREFDDEKILVQHQK   32 (406)
Q Consensus        12 p~-C~~CgK~Fs~ks~Lk~H~R   32 (406)
                      +| |.+||+.|.....|.+|++
T Consensus         2 ~~~C~~C~k~f~~~~~l~~H~~   23 (30)
T 1klr_A            2 TYQCQYCEFRSADSSNLKTHIK   23 (30)
T ss_dssp             CCCCSSSSCCCSCSHHHHHHHH
T ss_pred             CccCCCCCCccCCHHHHHHHHH
Confidence            56 9999999999999999987

>1va1_A Transcription factor SP1; C2H2 type zinc finger, DNA-binding protein; NMR {Homo sapiens}

Probab=96.73  E-value=0.00086  Score=43.63  Aligned_cols=26  Identities=19%  Similarity=0.390  Sum_probs=23.0

Q ss_pred             CCCCccc-cCc--cCcccCChHHHHHHhh
Q 015460            7 RVSSKVW-CYY--CDREFDDEKILVQHQK   32 (406)
Q Consensus         7 r~gEKp~-C~~--CgK~Fs~ks~Lk~H~R   32 (406)
                      ..++++| |.+  |||.|.+++.|++|++
T Consensus         3 ~~~~k~~~C~~~~C~k~f~~~~~L~~H~~   31 (37)
T 1va1_A            3 PGKKKQHICHIQGCGKVYGKTSHLRAHLR   31 (37)
T ss_dssp             SSSCCCEECCSTTCCCEESCHHHHHHHHH
T ss_pred             CCCCCCCCCCCCCCCCccCCHHHHHHHHH
Confidence            4578888 995  9999999999999987

>1rik_A E6APC1 peptide; E6-binding domain, zinc finger, human papillomavirus, HPV E6 protein, de novo protein; NMR {Synthetic} SCOP: k.12.1.1 PDB: 1sp1_A 1va3_A

Probab=96.70  E-value=0.00068  Score=40.90  Aligned_cols=22  Identities=23%  Similarity=0.395  Sum_probs=20.0

Q ss_pred             ccc-cCccCcccCChHHHHHHhh
Q 015460           11 KVW-CYYCDREFDDEKILVQHQK   32 (406)
Q Consensus        11 Kp~-C~~CgK~Fs~ks~Lk~H~R   32 (406)
                      ++| |.+||+.|.....|.+|++
T Consensus         1 k~~~C~~C~k~f~~~~~l~~H~~   23 (29)
T 1rik_A            1 YKFACPECPKRFMRSDHLTLHIL   23 (29)
T ss_dssp             CCEECSSSSCEESCSHHHHHHHT
T ss_pred             CCccCCCCCchhCCHHHHHHHHH
Confidence            356 9999999999999999986

>2m0e_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=96.63  E-value=0.00089  Score=40.02  Aligned_cols=22  Identities=36%  Similarity=0.619  Sum_probs=19.9

Q ss_pred             ccc-cCccCcccCChHHHHHHhh
Q 015460           11 KVW-CYYCDREFDDEKILVQHQK   32 (406)
Q Consensus        11 Kp~-C~~CgK~Fs~ks~Lk~H~R   32 (406)
                      ++| |.+|++.|.....|..|++
T Consensus         1 k~~~C~~C~~~f~~~~~l~~H~~   23 (29)
T 2m0e_A            1 KEHKCPHCDKKFNQVGNLKAHLK   23 (29)
T ss_dssp             CCCCCSSCCCCCCTTTHHHHHHH
T ss_pred             CCCcCCCCCcccCCHHHHHHHHH
Confidence            356 9999999999999999986

>1znf_A 31ST zinc finger from XFIN; zinc finger DNA binding domain; NMR {Xenopus laevis} SCOP: g.37.1.1

Probab=96.60  E-value=0.0011  Score=39.33  Aligned_cols=19  Identities=37%  Similarity=0.873  Sum_probs=18.3

Q ss_pred             cCccCcccCChHHHHHHhh
Q 015460           14 CYYCDREFDDEKILVQHQK   32 (406)
Q Consensus        14 C~~CgK~Fs~ks~Lk~H~R   32 (406)
                      |.+|||.|.++..|++|++
T Consensus         4 C~~C~k~f~~~~~l~~H~~   22 (27)
T 1znf_A            4 CGLCERSFVEKSALSRHQR   22 (27)
T ss_dssp             CSSSCCBCSSHHHHHHHGG
T ss_pred             CCCCCCcCCCHHHHHHHHH
Confidence            9999999999999999986

>2m0f_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=96.59  E-value=0.001  Score=39.89  Aligned_cols=21  Identities=24%  Similarity=0.551  Sum_probs=19.5

Q ss_pred             cc-cCccCcccCChHHHHHHhh
Q 015460           12 VW-CYYCDREFDDEKILVQHQK   32 (406)
Q Consensus        12 p~-C~~CgK~Fs~ks~Lk~H~R   32 (406)
                      +| |.+|++.|.....|.+|++
T Consensus         2 ~~~C~~C~k~f~~~~~l~~H~~   23 (29)
T 2m0f_A            2 PLKCRECGKQFTTSGNLKRHLR   23 (29)
T ss_dssp             CEECTTTSCEESCHHHHHHHHH
T ss_pred             CccCCCCCCccCChhHHHHHHH
Confidence            56 9999999999999999986

>2lvr_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, classical zinc finger, transcription; NMR {Homo sapiens}

Probab=95.61  E-value=0.00034  Score=42.52  Aligned_cols=23  Identities=35%  Similarity=0.749  Sum_probs=20.7

Q ss_pred             Cccc-cCccCcccCChHHHHHHhh
Q 015460           10 SKVW-CYYCDREFDDEKILVQHQK   32 (406)
Q Consensus        10 EKp~-C~~CgK~Fs~ks~Lk~H~R   32 (406)
                      +++| |.+||+.|.....|.+|++
T Consensus         1 ~k~~~C~~C~k~f~~~~~l~~H~~   24 (30)
T 2lvr_A            1 MKPYVCIHCQRQFADPGALQRHVR   24 (30)
Confidence            3567 9999999999999999986

>1zfd_A SWI5; DNA binding motif, zinc finger DNA binding domain; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=96.51  E-value=0.0014  Score=40.70  Aligned_cols=23  Identities=30%  Similarity=0.723  Sum_probs=20.8

Q ss_pred             Cccc-cC--ccCcccCChHHHHHHhh
Q 015460           10 SKVW-CY--YCDREFDDEKILVQHQK   32 (406)
Q Consensus        10 EKp~-C~--~CgK~Fs~ks~Lk~H~R   32 (406)
                      +++| |.  .|||.|.+...|.+|++
T Consensus         1 ek~~~C~~~~C~k~f~~~~~L~~H~~   26 (32)
T 1zfd_A            1 DRPYSCDHPGCDKAFVRNHDLIRHKK   26 (32)
T ss_dssp             CCSBCCCCTTCCCCBSSSHHHHHHHG
T ss_pred             CCCCcCcCCCCCCccCCHHHHHHHHH
Confidence            4677 99  89999999999999987

>1zw8_A Zinc-responsive transcriptional regulator ZAP1; interacting C2H2 zinc fingers, beta-BETA-alpha, solution structure; NMR {Saccharomyces cerevisiae}

Probab=96.48  E-value=0.0021  Score=48.57  Aligned_cols=46  Identities=17%  Similarity=0.327  Sum_probs=32.0

Q ss_pred             cCc--cCcccCChHHHHHHhh-----cc------ccccc--cccCccCCchhhHhhhhhhc
Q 015460           14 CYY--CDREFDDEKILVQHQK-----AK------HFKCH--VCHKKLSTAGGMAIHVLQVH   59 (406)
Q Consensus        14 C~~--CgK~Fs~ks~Lk~H~R-----EK------PfkC~--~CgksFss~s~LkrH~rthH   59 (406)
                      |++  |++.|.....|..|+.     .+      .|.|.  .|++.+.....|.+|+|..|
T Consensus         4 C~W~~C~~~f~~~~~l~~Hv~~~Hv~~~~~~~~~~~~C~W~~C~~~~~~~~~L~~Hir~~H   64 (64)
T 1zw8_A            4 CKWKECPESASSLFDLQRHLLKDHVSQDFKHPMEPLACNWEDCDFLGDDTASIVNHINAQH   64 (64)
T ss_dssp             CCCTTCCCCCSSHHHHHHHHHHHSCCCCCCCSSCCEECCCSSCCCEESSHHHHHHHHHHHC
T ss_pred             EeeCCCCCcCCCHHHHHHHHHhhccCcccCCCCCCCEeeCCCCcCCCCChHHHHhhccccC
Confidence            544  7788888888877763     22      57776  57777777777777776654

>2lvt_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, transcription; NMR {Homo sapiens}

Probab=95.42  E-value=0.00051  Score=41.66  Aligned_cols=22  Identities=27%  Similarity=0.685  Sum_probs=19.8

Q ss_pred             ccc-cCccCcccCChHHHHHHhh
Q 015460           11 KVW-CYYCDREFDDEKILVQHQK   32 (406)
Q Consensus        11 Kp~-C~~CgK~Fs~ks~Lk~H~R   32 (406)
                      ++| |.+||+.|.....|.+|++
T Consensus         1 k~~~C~~C~k~f~~~~~l~~H~~   23 (29)
T 2lvt_A            1 KPCQCVMCGKAFTQASSLIAHVR   23 (29)
Confidence            356 9999999999999999976

>1paa_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=96.38  E-value=0.0015  Score=39.57  Aligned_cols=21  Identities=38%  Similarity=0.967  Sum_probs=19.0

Q ss_pred             cc-cCccCcccCChHHHHHH-hh
Q 015460           12 VW-CYYCDREFDDEKILVQH-QK   32 (406)
Q Consensus        12 p~-C~~CgK~Fs~ks~Lk~H-~R   32 (406)
                      +| |.+||+.|.+...|.+| ++
T Consensus         2 ~~~C~~C~k~f~~~~~l~~H~~~   24 (30)
T 1paa_A            2 AYACGLCNRAFTRRDLLIRHAQK   24 (30)
T ss_dssp             CSBCTTTCCBCSSSHHHHHHHTT
T ss_pred             CcCCcccCcccCChHHHHHHHHH
Confidence            56 99999999999999999 44

>1sp2_A SP1F2; zinc finger, transcription activation; NMR {Homo sapiens} SCOP: g.37.1.1 PDB: 1va2_A

Probab=96.22  E-value=0.0025  Score=39.30  Aligned_cols=22  Identities=27%  Similarity=0.841  Sum_probs=19.6

Q ss_pred             ccc-cC--ccCcccCChHHHHHHhh
Q 015460           11 KVW-CY--YCDREFDDEKILVQHQK   32 (406)
Q Consensus        11 Kp~-C~--~CgK~Fs~ks~Lk~H~R   32 (406)
                      ++| |.  +|||.|.+.+.|++|++
T Consensus         1 kp~~C~~~~C~k~f~~~~~L~~H~~   25 (31)
T 1sp2_A            1 RPFMCTWSYCGKRFTRSDELQRHKR   25 (31)
T ss_dssp             CCCBCCSTTCCCBCSSHHHHHHHHT
T ss_pred             CCcCCcCCCCCcccCCHhHHHHHHH
Confidence            356 98  89999999999999987

>2ab3_A ZNF29; zinc finger protein, beta BETA alpha, RREIIB-TR, RNA binding protein; NMR {Escherichia coli} SCOP: k.12.1.1 PDB: 2ab7_A

Probab=96.03  E-value=0.0026  Score=38.10  Aligned_cols=21  Identities=43%  Similarity=0.964  Sum_probs=19.3

Q ss_pred             cc-cC--ccCcccCChHHHHHHhh
Q 015460           12 VW-CY--YCDREFDDEKILVQHQK   32 (406)
Q Consensus        12 p~-C~--~CgK~Fs~ks~Lk~H~R   32 (406)
                      +| |.  +|||.|...+.|++|++
T Consensus         2 ~~~C~~~~C~k~f~~~~~l~~H~~   25 (29)
T 2ab3_A            2 VYVCHFENCGRSFNDRRKLNRHKK   25 (29)
T ss_dssp             CEEECSTTTCEEESSHHHHHHHHG
T ss_pred             CCCCcCCcCcCccCCHHHHHHHHH
Confidence            45 99  99999999999999976

>1ncs_A Peptide M30F, transcriptional factor SWI5; DNA binding motif, transcription regulation, zinc-finger; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=95.86  E-value=0.0019  Score=44.50  Aligned_cols=26  Identities=19%  Similarity=0.521  Sum_probs=23.1

Q ss_pred             CCCCccc-cC--ccCcccCChHHHHHHhh
Q 015460            7 RVSSKVW-CY--YCDREFDDEKILVQHQK   32 (406)
Q Consensus         7 r~gEKp~-C~--~CgK~Fs~ks~Lk~H~R   32 (406)
                      +.++++| |.  .|||.|.+++.|++|++
T Consensus        13 H~~~k~~~C~~~~C~k~F~~~~~L~~H~~   41 (47)
T 1ncs_A           13 EMPDKTFECLFPGCTKTFKRRYNIRSHIQ   41 (47)
T ss_dssp             EETTTEEECCCTTCCCEECSSSSHHHHHH
T ss_pred             cCCCCCeECCCCCCCCccCCHHHHHHHHH
Confidence            4578889 96  69999999999999987

>1zu1_A DSRBP-ZFA, RNA binding protein ZFA; zinc finger protein, helix-loop-helix, helix-turn-helix; NMR {Xenopus laevis} SCOP: g.37.1.4 g.37.1.4

Probab=95.04  E-value=0.006  Score=52.21  Aligned_cols=24  Identities=25%  Similarity=0.218  Sum_probs=21.4

Q ss_pred             CCccceeecCCCCCCHhHHHHHhh
Q 015460           73 RESTDIEIYGMQGIPPDVLAAHYG   96 (406)
Q Consensus        73 r~s~~c~iCG~~fi~~~~L~~H~k   96 (406)
                      ...+.|++|.+.|.....+..|..
T Consensus        91 ~~~~~C~~C~~~f~s~~~~~~H~~  114 (127)
T 1zu1_A           91 DRSKCCPVCNMTFSSPVVAESHYI  114 (127)
T ss_dssp             CTTTEETTTTEECSSHHHHHHHHT
T ss_pred             CCCeEcCCCCCEeCCHHHHHHHHC
Confidence            456889999999999999999985

>1zr9_A Zinc finger protein 593; DNA binding, structural genomics, PSI, protein structure initiative, center for eukaryotic structural genomics, CESG; NMR {Homo sapiens} SCOP: g.37.1.4

Probab=94.74  E-value=0.0097  Score=51.15  Aligned_cols=26  Identities=12%  Similarity=0.333  Sum_probs=22.5

Q ss_pred             ccccccccccCccCCchhhHhhhhhh
Q 015460           33 AKHFKCHVCHKKLSTAGGMAIHVLQV   58 (406)
Q Consensus        33 EKPfkC~~CgksFss~s~LkrH~rth   58 (406)
                      +++|.|..|+|.|.+...|..|+++.
T Consensus        48 ekpfyC~~C~K~F~~~~~L~~H~rsK   73 (124)
T 1zr9_A           48 GGLHRCLACARYFIDSTNLKTHFRSK   73 (124)
T ss_dssp             GGCSEETTTTEECSSHHHHHHHTTCH
T ss_pred             CcceEcccCcchhCCHHHHHHHHhhh
Confidence            88899999999999999999998764

>1zr9_A Zinc finger protein 593; DNA binding, structural genomics, PSI, protein structure initiative, center for eukaryotic structural genomics, CESG; NMR {Homo sapiens} SCOP: g.37.1.4

Probab=94.23  E-value=0.012  Score=50.51  Aligned_cols=28  Identities=29%  Similarity=0.496  Sum_probs=23.0

Q ss_pred             CCccc-cCccCcccCChHHHHHHhhcccc
Q 015460            9 SSKVW-CYYCDREFDDEKILVQHQKAKHF   36 (406)
Q Consensus         9 gEKp~-C~~CgK~Fs~ks~Lk~H~REKPf   36 (406)
                      |++.| |..|+|.|.+...|..|+|.|.+
T Consensus        47 GekpfyC~~C~K~F~~~~~L~~H~rsK~H   75 (124)
T 1zr9_A           47 GGGLHRCLACARYFIDSTNLKTHFRSKDH   75 (124)
T ss_dssp             GGGCSEETTTTEECSSHHHHHHHTTCHHH
T ss_pred             CCcceEcccCcchhCCHHHHHHHHhhhhh
Confidence            66777 99999999999999999874433

>1zu1_A DSRBP-ZFA, RNA binding protein ZFA; zinc finger protein, helix-loop-helix, helix-turn-helix; NMR {Xenopus laevis} SCOP: g.37.1.4 g.37.1.4

Probab=93.82  E-value=0.029  Score=47.88  Aligned_cols=44  Identities=20%  Similarity=0.356  Sum_probs=36.9

Q ss_pred             ccCccCcccCChHHHHHHhh-------------------------------------ccccccccccCccCCchhhHhhh
Q 015460           13 WCYYCDREFDDEKILVQHQK-------------------------------------AKHFKCHVCHKKLSTAGGMAIHV   55 (406)
Q Consensus        13 ~C~~CgK~Fs~ks~Lk~H~R-------------------------------------EKPfkC~~CgksFss~s~LkrH~   55 (406)
                      +|.+|+..|...+.+..|.+                                     .+.|-|.+|++.|.+...|..|.
T Consensus        34 ~C~~C~v~~~S~s~~~~H~~gkkH~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~C~~C~~~f~s~~~~~~H~  113 (127)
T 1zu1_A           34 QCKVCSAVLISESQKLAHYQSRKHANKVRRYMAINQGEDSVPAKKFKAAPAEISDGEDRSKCCPVCNMTFSSPVVAESHY  113 (127)
T ss_dssp             EETTTTEECCSHHHHHHHHHCHHHHHHHHHHHHHTTCCCCCSCCCCSCCSSCCSSCCCTTTEETTTTEECSSHHHHHHHH
T ss_pred             cCcCCCCEeCCHHHHHHHHCcHHHHHHHHHHhcccCcccCCCCCccCCCccccccCCCCCeEcCCCCCEeCCHHHHHHHH
Confidence            49999999999999988873                                     12456999999999999999997


Q ss_pred             h
Q 015460           56 L   56 (406)
Q Consensus        56 r   56 (406)
                      +
T Consensus       114 ~  114 (127)
T 1zu1_A          114 I  114 (127)
T ss_dssp             T
T ss_pred             C
Confidence            3

>1zw8_A Zinc-responsive transcriptional regulator ZAP1; interacting C2H2 zinc fingers, beta-BETA-alpha, solution structure; NMR {Saccharomyces cerevisiae}

Probab=92.40  E-value=0.13  Score=38.50  Aligned_cols=57  Identities=18%  Similarity=0.255  Sum_probs=40.8

Q ss_pred             ccccc--ccCccCCchhhHhhhh-hhccCcccccCCCCCCCCcccee--ecCCCCCCHhHHHHHhhhc
Q 015460           36 FKCHV--CHKKLSTAGGMAIHVL-QVHKENVTKVPNAKPGRESTDIE--IYGMQGIPPDVLAAHYGEE   98 (406)
Q Consensus        36 fkC~~--CgksFss~s~LkrH~r-thHgek~~~Cp~~~~~r~s~~c~--iCG~~fi~~~~L~~H~k~h   98 (406)
                      |.|.-  |++.|.+...|..|+. .|.+.+.      ......+.|.  .|++.+.....|..|++.+
T Consensus         2 l~C~W~~C~~~f~~~~~l~~Hv~~~Hv~~~~------~~~~~~~~C~W~~C~~~~~~~~~L~~Hir~~   63 (64)
T 1zw8_A            2 LKCKWKECPESASSLFDLQRHLLKDHVSQDF------KHPMEPLACNWEDCDFLGDDTASIVNHINAQ   63 (64)
T ss_dssp             CCCCCTTCCCCCSSHHHHHHHHHHHSCCCCC------CCSSCCEECCCSSCCCEESSHHHHHHHHHHH
T ss_pred             CeEeeCCCCCcCCCHHHHHHHHHhhccCccc------CCCCCCCEeeCCCCcCCCCChHHHHhhcccc
Confidence            45654  9999999999999984 5554431      0112356664  8888888889999998753

>2e72_A POGO transposable element with ZNF domain; zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=91.04  E-value=0.18  Score=36.16  Aligned_cols=22  Identities=14%  Similarity=0.354  Sum_probs=14.0

Q ss_pred             ccccccccCccCCchhhHhhhh
Q 015460           35 HFKCHVCHKKLSTAGGMAIHVL   56 (406)
Q Consensus        35 PfkC~~CgksFss~s~LkrH~r   56 (406)
                      .|.|..|++.|...+.|++||+
T Consensus        12 ~~~CPrCn~~f~~~~sLr~Hmk   33 (49)
T 2e72_A           12 RKICPRCNAQFRVTEALRGHMC   33 (49)
T ss_dssp             CCCCTTTCCCCSSHHHHHHHHH
T ss_pred             ceeCCcccccccchHHHHhhhh
Confidence            4566666666666666666663

>2e72_A POGO transposable element with ZNF domain; zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=87.85  E-value=0.27  Score=35.29  Aligned_cols=21  Identities=24%  Similarity=0.401  Sum_probs=19.2

Q ss_pred             cccCccCcccCChHHHHHHhh
Q 015460           12 VWCYYCDREFDDEKILVQHQK   32 (406)
Q Consensus        12 p~C~~CgK~Fs~ks~Lk~H~R   32 (406)
                      ..|..|++.|.....|+.||+
T Consensus        13 ~~CPrCn~~f~~~~sLr~Hmk   33 (49)
T 2e72_A           13 KICPRCNAQFRVTEALRGHMC   33 (49)
T ss_dssp             CCCTTTCCCCSSHHHHHHHHH
T ss_pred             eeCCcccccccchHHHHhhhh
Confidence            339999999999999999987

>2elu_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2elw_A

Probab=85.36  E-value=0.4  Score=31.70  Aligned_cols=21  Identities=29%  Similarity=0.835  Sum_probs=17.6

Q ss_pred             cccCccCcccCChHHHHHHhh
Q 015460           12 VWCYYCDREFDDEKILVQHQK   32 (406)
Q Consensus        12 p~C~~CgK~Fs~ks~Lk~H~R   32 (406)
                      -+|.+|.|.+++..+|..|+|
T Consensus        10 qhcrfckkkysdvknlikhir   30 (37)
T 2elu_A           10 QHCRFCKKKYSDVKNLIKHIR   30 (37)
T ss_dssp             CEETTTTEECSSHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHH
Confidence            348889888888888888887

>2jsp_A Transcriptional regulatory protein ROS; prokaryotic Cys2His2 zinc finger, gene regulation; NMR {Agrobacterium tumefaciens}

Probab=84.88  E-value=0.25  Score=39.83  Aligned_cols=28  Identities=18%  Similarity=0.383  Sum_probs=22.2

Q ss_pred             ccccccccccCccCCchhhHhhhhhhccCcc
Q 015460           33 AKHFKCHVCHKKLSTAGGMAIHVLQVHKENV   63 (406)
Q Consensus        33 EKPfkC~~CgksFss~s~LkrH~rthHgek~   63 (406)
                      +.-..|.+||+.|.   .|++|+++|||..+
T Consensus        19 ~d~iiClecGK~fK---~LkRHL~~~hgltp   46 (87)
T 2jsp_A           19 DDHIVCLECGGSFK---SLKRHLTTHHSMTP   46 (87)
T ss_dssp             SSCEECTBTCCEES---BHHHHHHHTTCSCH
T ss_pred             CCceEecccchhhH---HHHHHHHHccCCCH
Confidence            34467999999998   48899999888765

>3hcs_A TNF receptor-associated factor 6; cross-brace, beta-BETA-alpha, coiled coil, cytoplasm, metal- binding, UBL conjugation, UBL conjugation pathway; 2.20A {Homo sapiens}

Probab=82.25  E-value=0.56  Score=41.06  Aligned_cols=74  Identities=16%  Similarity=0.190  Sum_probs=51.7

Q ss_pred             ccc--CccCcccCChHHHHHHhh---ccccccccccCccCCchhhHhhhhhhccCcccccCCCCCCCCccceeecCCCCC
Q 015460           12 VWC--YYCDREFDDEKILVQHQK---AKHFKCHVCHKKLSTAGGMAIHVLQVHKENVTKVPNAKPGRESTDIEIYGMQGI   86 (406)
Q Consensus        12 p~C--~~CgK~Fs~ks~Lk~H~R---EKPfkC~~CgksFss~s~LkrH~rthHgek~~~Cp~~~~~r~s~~c~iCG~~fi   86 (406)
                      .+|  ..|+..+. ...|..|.+   .++..|..|+..+ .+..|..|.+..-..            +...|..|+..+.
T Consensus        83 v~C~n~GC~~~~~-~~~l~~H~~~C~~~~v~C~~C~~~~-~r~~l~~H~~~~C~~------------r~~~C~~C~~~~~  148 (170)
T 3hcs_A           83 VKCPNEGCLHKME-LRHLEDHQAHCEFALMDCPQCQRPF-QKFHINIHILKDCPR------------RQVSCDNCAASMA  148 (170)
T ss_dssp             EECCSTTCCCEEE-GGGHHHHHTTCTTSEEECTTTCCEE-EGGGHHHHHHHTCTT------------CEEECTTTCCEEE
T ss_pred             cCCCCCCCCceec-HhHHHHHHhcCCceeeECCCCChHH-HHHHHHHHhhhhCCC------------CCeECCCCCCccC
Confidence            348  56887765 457888987   6778899999888 567788897433333            3445666777777


Q ss_pred             CHhHHHHHhhhccC
Q 015460           87 PPDVLAAHYGEEEE  100 (406)
Q Consensus        87 ~~~~L~~H~k~he~  100 (406)
                      .. +|++|+..+.+
T Consensus       149 ~~-~l~~H~~~~~~  161 (170)
T 3hcs_A          149 FE-DKEIHDQNCPL  161 (170)
T ss_dssp             GG-GHHHHHTTCCC
T ss_pred             HH-HHHhHHHhCcC
Confidence            75 46888887765

>3hcs_A TNF receptor-associated factor 6; cross-brace, beta-BETA-alpha, coiled coil, cytoplasm, metal- binding, UBL conjugation, UBL conjugation pathway; 2.20A {Homo sapiens}

Probab=80.06  E-value=1.1  Score=39.16  Aligned_cols=42  Identities=14%  Similarity=0.204  Sum_probs=19.5

Q ss_pred             ccCccCcccCChH-----HHHHHhhcccccc--ccccCccCCchhhHhhh
Q 015460           13 WCYYCDREFDDEK-----ILVQHQKAKHFKC--HVCHKKLSTAGGMAIHV   55 (406)
Q Consensus        13 ~C~~CgK~Fs~ks-----~Lk~H~REKPfkC--~~CgksFss~s~LkrH~   55 (406)
                      .|..|.+.+....     .+.+-+.+....|  .-|+..+. ...|..|.
T Consensus        55 ~CP~Cr~~~~~~~~~~~~~~~~~i~~l~v~C~n~GC~~~~~-~~~l~~H~  103 (170)
T 3hcs_A           55 KCPVDNEILLENQLFPDNFAKREILSLMVKCPNEGCLHKME-LRHLEDHQ  103 (170)
T ss_dssp             BCTTTCCBCCGGGCEECHHHHHHHHTSEEECCSTTCCCEEE-GGGHHHHH
T ss_pred             CCCCCccCcchhhhhhhHHHHHHHhhcccCCCCCCCCceec-HhHHHHHH
Confidence            3777766655431     1222222444556  34655443 34455554

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	406
d2ct1a2	36	g.37.1.1 (A:8-43) Transcriptional repressor CTCF {	8e-04
d1zr9a1	67	g.37.1.4 (A:28-94) Zinc finger protein 593, ZNF593	0.003

>d2ct1a2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]} Length = 36

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 34.6 bits (80), Expect = 8e-04
 Identities = 14/34 (41%), Positives = 23/34 (67%)

Query: 30 HQKAKHFKCHVCHKKLSTAGGMAIHVLQVHKENV 63
          H   K ++C++CH + + +G M +H+LQ H ENV
Sbjct: 3  HSGEKPYECYICHARFTQSGTMKMHILQKHTENV 36

>d1zr9a1 g.37.1.4 (A:28-94) Zinc finger protein 593, ZNF593 {Human (Homo sapiens) [TaxId: 9606]} Length = 67

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: HkH motif-containing C2H2 finger
domain: Zinc finger protein 593, ZNF593
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 33.9 bits (78), Expect = 0.003
 Identities = 9/24 (37%), Positives = 11/24 (45%)

Query: 14 CYYCDREFDDEKILVQHQKAKHFK 37
          C  C R F D   L  H ++K  K
Sbjct: 18 CLACARYFIDSTNLKTHFRSKDHK 41

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	406
d2csha1	53	Zinc finger protein 297b {Human (Homo sapiens) [Ta	99.36
d2csha1	53	Zinc finger protein 297b {Human (Homo sapiens) [Ta	99.23
d2epsa1	39	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	98.91
d1a1ia2	28	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	98.82
d2adra1	29	ADR1 {Synthetic, based on Saccharomyces cerevisiae	98.81
d2cota2	38	Zinc finger and SCAN domain-containing protein 16,	98.76
d1sp1a_	29	Transcription factor sp1 {Human (Homo sapiens) [Ta	98.75
d1x6ea1	33	Zinc finger protein 24 {Human (Homo sapiens) [TaxI	98.73
d1x6ha2	36	Transcriptional repressor CTCF {Human (Homo sapien	98.64
d2epsa1	39	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	98.63
d1srka_	35	Zinc finger protein ZFPM1 (FOG-1) {Mouse (Mus musc	98.57
d2ct1a2	36	Transcriptional repressor CTCF {Human (Homo sapien	98.56
d1x6ea2	26	Zinc finger protein 24 {Human (Homo sapiens) [TaxI	98.55
d1ncsa_	47	SWI5 zinc-finger domains {Baker's yeast (Saccharom	98.51
d1p7aa_	37	Kruppel-like factor 3, Bklf {Mouse (Mus musculus)	98.51
d2glia3	30	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	98.46
d1ubdc3	30	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	98.44
d1sp2a_	31	Transcription factor sp1 {Human (Homo sapiens) [Ta	98.42
d2dlka2	36	Zinc finger protein 692, ZNF692 {Human (Homo sapie	98.41
d1zfda_	32	SWI5 zinc-finger domains {Baker's yeast (Saccharom	98.36
d1a1ia1	29	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	98.21
d2dmda2	26	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	98.18
d1ubdc4	28	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	98.18
d1a1ia3	28	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	98.07
d1srka_	35	Zinc finger protein ZFPM1 (FOG-1) {Mouse (Mus musc	98.07
d1x6ha2	36	Transcriptional repressor CTCF {Human (Homo sapien	98.06
d1a1ia2	28	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	98.03
d2ct1a2	36	Transcriptional repressor CTCF {Human (Homo sapien	97.98
d1p7aa_	37	Kruppel-like factor 3, Bklf {Mouse (Mus musculus)	97.97
d2cota2	38	Zinc finger and SCAN domain-containing protein 16,	97.95
d1x6ea1	33	Zinc finger protein 24 {Human (Homo sapiens) [TaxI	97.93
d2dlka2	36	Zinc finger protein 692, ZNF692 {Human (Homo sapie	97.93
d1x6ea2	26	Zinc finger protein 24 {Human (Homo sapiens) [TaxI	97.9
d2adra1	29	ADR1 {Synthetic, based on Saccharomyces cerevisiae	97.84
d1sp1a_	29	Transcription factor sp1 {Human (Homo sapiens) [Ta	97.79
d2epra1	35	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	97.64
d1ubdc2	28	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	97.59
d2epqa1	32	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	97.48
d1zfda_	32	SWI5 zinc-finger domains {Baker's yeast (Saccharom	97.45
d1ncsa_	47	SWI5 zinc-finger domains {Baker's yeast (Saccharom	97.43
d2dmda3	29	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	97.37
d2glia3	30	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	97.3
d1ubdc3	30	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	97.26
d1a1ia3	28	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	97.26
d2glia5	29	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	97.23
d1znfa_	26	XFIN, third domain {Xenopus laevis [TaxId: 8355]}	97.2
d1ubdc4	28	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	97.15
d2dlqa4	27	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	97.12
d2dmda2	26	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	97.1
d1sp2a_	31	Transcription factor sp1 {Human (Homo sapiens) [Ta	97.1
d1a1ia1	29	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	97.07
d1klra_	30	ZFY {Human (Homo sapiens) [TaxId: 9606]}	96.94
d2epra1	35	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	96.84
d1bboa1	28	Enhancer binding protein {Human (Homo sapiens) [Ta	96.75
d2dmda1	28	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	96.67
d2adra2	31	ADR1 {Synthetic, based on Saccharomyces cerevisiae	96.63
d1x5wa2	29	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	96.42
d1tf3a2	30	Transcription factor IIIA, TFIIIA {Xenopus laevis	96.27
d2j7ja2	29	Transcription factor IIIA, TFIIIA {Xenopus laevis	96.26
d2dlqa3	30	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	96.05
d2glia4	31	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	96.02
d1ubdc2	28	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	95.83
d1njqa_	37	SUPERMAN zinc finger domain {Thale cress (Arabidop	95.82
d1bhia_	38	Transactivation domain of cre-bp1/atf-2 {Human (Ho	95.41
d2epqa1	32	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	95.41
d2csha2	44	Zinc finger protein 297b {Human (Homo sapiens) [Ta	95.37
d1bboa2	29	Enhancer binding protein {Human (Homo sapiens) [Ta	95.16
d2dlqa2	28	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	94.93
d1x6ha1	37	Transcriptional repressor CTCF {Human (Homo sapien	94.79
d1klra_	30	ZFY {Human (Homo sapiens) [TaxId: 9606]}	94.72
d2csha2	44	Zinc finger protein 297b {Human (Homo sapiens) [Ta	94.7
d2dlqa1	26	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	94.6
d1znfa_	26	XFIN, third domain {Xenopus laevis [TaxId: 8355]}	94.38
d2glia5	29	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	93.94
d1bboa2	29	Enhancer binding protein {Human (Homo sapiens) [Ta	93.85
d2drpa2	26	Tramtrack protein (two zinc-finger peptide) {Droso	93.62
d2j7ja2	29	Transcription factor IIIA, TFIIIA {Xenopus laevis	93.55
d2adra2	31	ADR1 {Synthetic, based on Saccharomyces cerevisiae	93.29
d1x5wa1	28	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	92.83
d2eppa1	53	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	91.79
d2dmda1	28	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	91.61
d1zr9a1	67	Zinc finger protein 593, ZNF593 {Human (Homo sapie	91.59
d2dlqa4	27	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	91.39
d1njqa_	37	SUPERMAN zinc finger domain {Thale cress (Arabidop	91.13
d1bboa1	28	Enhancer binding protein {Human (Homo sapiens) [Ta	91.06
d2eppa1	53	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	89.91
d2ct1a1	28	Transcriptional repressor CTCF {Human (Homo sapien	89.14
d2glia2	33	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	89.11
d2glia4	31	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	88.78
d2drpa2	26	Tramtrack protein (two zinc-finger peptide) {Droso	88.34
d1x6ha1	37	Transcriptional repressor CTCF {Human (Homo sapien	88.17
d2dlqa2	28	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	87.41
d2dlqa3	30	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	86.44
d2ctda2	30	Zinc finger protein 512, ZNF512 {Human (Homo sapie	86.18
d1bhia_	38	Transactivation domain of cre-bp1/atf-2 {Human (Ho	86.16
d2j7ja1	28	Transcription factor IIIA, TFIIIA {Xenopus laevis	86.08
d1tf3a3	31	Transcription factor IIIA, TFIIIA {Xenopus laevis	86.01
d2ct1a1	28	Transcriptional repressor CTCF {Human (Homo sapien	85.99
d2dmda3	29	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	85.37
d1tf3a2	30	Transcription factor IIIA, TFIIIA {Xenopus laevis	83.14
d2drpa1	37	Tramtrack protein (two zinc-finger peptide) {Droso	82.49
d2dlka1	30	Zinc finger protein 692, ZNF692 {Human (Homo sapie	80.87
d1x5wa2	29	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	80.57

>d2csha1 g.37.1.1 (A:8-60) Zinc finger protein 297b {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 297b
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.36  E-value=1.2e-13  Score=100.08  Aligned_cols=48  Identities=23%  Similarity=0.521  Sum_probs=38.6

Q ss_pred             Cccc-cCccCcccCChHHHHHHhh----ccccccccccCccCCchhhHhhhhhh
Q 015460           10 SKVW-CYYCDREFDDEKILVQHQK----AKHFKCHVCHKKLSTAGGMAIHVLQV   58 (406)
Q Consensus        10 EKp~-C~~CgK~Fs~ks~Lk~H~R----EKPfkC~~CgksFss~s~LkrH~rth   58 (406)
                      ||+| |+ |||.|..+..|.+|++    ||+|+|.+|+++|.++++|.+|+++|
T Consensus         1 EK~y~C~-Cgk~F~~~~~l~~H~~~Ht~ekpy~C~~C~k~F~~~~~L~~H~r~H   53 (53)
T d2csha1           1 DKLYPCQ-CGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHMKIH   53 (53)
T ss_dssp             CCCEECT-TSCEESSHHHHHHHHHHHSCCCSEECTTTSCEESSSHHHHHHHTTT
T ss_pred             CcCCCCC-CCCeECCHHHhHHHhhccccccCCcCCCcCCEecCHHHHHHHHhcC
Confidence            5677 84 8888888888888877    78888888888888888888887665

>d2csha1 g.37.1.1 (A:8-60) Zinc finger protein 297b {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 297b
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.23  E-value=1.5e-12  Score=94.26  Aligned_cols=53  Identities=15%  Similarity=0.161  Sum_probs=48.2

Q ss_pred             ccccccccccCccCCchhhHhhhhhhccCcccccCCCCCCCCccceeecCCCCCCHhHHHHHhhhc
Q 015460           33 AKHFKCHVCHKKLSTAGGMAIHVLQVHKENVTKVPNAKPGRESTDIEIYGMQGIPPDVLAAHYGEE   98 (406)
Q Consensus        33 EKPfkC~~CgksFss~s~LkrH~rthHgek~~~Cp~~~~~r~s~~c~iCG~~fi~~~~L~~H~k~h   98 (406)
                      ||+|+|+ ||++|.++.+|++|+++|.++++|            .|++||+.|.....|.+|+++|
T Consensus         1 EK~y~C~-Cgk~F~~~~~l~~H~~~Ht~ekpy------------~C~~C~k~F~~~~~L~~H~r~H   53 (53)
T d2csha1           1 DKLYPCQ-CGKSFTHKSQRDRHMSMHLGLRPY------------GCGVCGKKFKMKHHLVGHMKIH   53 (53)
T ss_dssp             CCCEECT-TSCEESSHHHHHHHHHHHSCCCSE------------ECTTTSCEESSSHHHHHHHTTT
T ss_pred             CcCCCCC-CCCeECCHHHhHHHhhccccccCC------------cCCCcCCEecCHHHHHHHHhcC
Confidence            7999995 999999999999999999988754            5567999999999999999886

>d2epsa1 g.37.1.1 (A:408-446) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.91  E-value=1.8e-10  Score=78.59  Aligned_cols=35  Identities=23%  Similarity=0.369  Sum_probs=31.8

Q ss_pred             ccccccccccCccCCchhhHhhhh-hhccCcccccC
Q 015460           33 AKHFKCHVCHKKLSTAGGMAIHVL-QVHKENVTKVP   67 (406)
Q Consensus        33 EKPfkC~~CgksFss~s~LkrH~r-thHgek~~~Cp   67 (406)
                      +|||+|.+|||+|.+.++|++|++ +|.++|+|+|.
T Consensus         3 ~Kpy~C~~Cgk~F~~~~~L~~H~r~~Ht~ekpy~C~   38 (39)
T d2epsa1           3 GKPYICQSCGKGFSRPDHLNGHIKQVHTSERPHKCQ   38 (39)
T ss_dssp             SCCEECSSSCCEESSHHHHHHHHHHTSCCCCCCCSS
T ss_pred             CCCccCCCCCCCcCChHHhhccCcCccCCCcCcCCc
Confidence            689999999999999999999976 68899999985

>d1a1ia2 g.37.1.1 (A:132-159) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.82  E-value=4.3e-10  Score=71.28  Aligned_cols=28  Identities=21%  Similarity=0.589  Sum_probs=26.7

Q ss_pred             ccccccccccCccCCchhhHhhhhhhcc
Q 015460           33 AKHFKCHVCHKKLSTAGGMAIHVLQVHK   60 (406)
Q Consensus        33 EKPfkC~~CgksFss~s~LkrH~rthHg   60 (406)
                      ||||+|.+|+|+|.++++|++|+|+|+|
T Consensus         1 EKPy~C~~C~k~F~~~~~L~~H~r~HTG   28 (28)
T d1a1ia2           1 QKPFQCRICMRNFSRSDHLTTHIRTHTG   28 (28)
T ss_dssp             CCCEECTTTCCEESCHHHHHHHHHHHHC
T ss_pred             CcCccCCCCcCEecccccccccCCCccC
Confidence            7999999999999999999999999976

>d2adra1 g.37.1.1 (A:102-130) ADR1 {Synthetic, based on Saccharomyces cerevisiae sequence}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ADR1
species: Synthetic, based on Saccharomyces cerevisiae sequence

Probab=98.81  E-value=7.8e-10  Score=70.65  Aligned_cols=29  Identities=21%  Similarity=0.494  Sum_probs=27.8

Q ss_pred             cccccccccCccCCchhhHhhhhhhccCc
Q 015460           34 KHFKCHVCHKKLSTAGGMAIHVLQVHKEN   62 (406)
Q Consensus        34 KPfkC~~CgksFss~s~LkrH~rthHgek   62 (406)
                      |||+|.+|+|+|.+.++|++|+|+|+|||
T Consensus         1 kp~~C~~C~k~F~~~~~L~~H~r~HTgEK   29 (29)
T d2adra1           1 RSFVCEVCTRAFARQEHLKRHYRSHTNEK   29 (29)
T ss_dssp             CCBCCTTTCCCBSCHHHHHHHHHTTTSSC
T ss_pred             CcCCCCCCCCCCCCchHcccccCcccCCC
Confidence            79999999999999999999999999986

>d2cota2 g.37.1.1 (A:7-44) Zinc finger and SCAN domain-containing protein 16, ZSCAN16 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger and SCAN domain-containing protein 16, ZSCAN16
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.76  E-value=7.6e-10  Score=74.93  Aligned_cols=29  Identities=24%  Similarity=0.503  Sum_probs=27.6

Q ss_pred             ccccccccccCccCCchhhHhhhhhhccC
Q 015460           33 AKHFKCHVCHKKLSTAGGMAIHVLQVHKE   61 (406)
Q Consensus        33 EKPfkC~~CgksFss~s~LkrH~rthHge   61 (406)
                      ||||+|++|||+|.+.++|.+|+|+|+||
T Consensus        10 ekpy~C~~CgK~F~~~s~L~~H~r~HtGE   38 (38)
T d2cota2          10 RRRYKCDECGKSFSHSSDLSKHRRTHTGE   38 (38)
T ss_dssp             SCSSBCSSSCCBCSCHHHHHHHHTTTCCS
T ss_pred             CCCEecCCCCceeeCHHHHHHhCccCCCC
Confidence            99999999999999999999999999886

>d1sp1a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor sp1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.75  E-value=1.8e-09  Score=68.96  Aligned_cols=29  Identities=21%  Similarity=0.532  Sum_probs=27.7

Q ss_pred             cccccccccCccCCchhhHhhhhhhccCc
Q 015460           34 KHFKCHVCHKKLSTAGGMAIHVLQVHKEN   62 (406)
Q Consensus        34 KPfkC~~CgksFss~s~LkrH~rthHgek   62 (406)
                      |+|.|.+|+|+|.++++|.+|+|+|+|||
T Consensus         1 Kpy~C~~C~k~F~~~s~L~~H~r~HtgeK   29 (29)
T d1sp1a_           1 KKFACPECPKRFMRSDHLSKHIKTHQNKK   29 (29)
T ss_dssp             CCSCCTTTTCCCSCSHHHHHHHHGGGCCC
T ss_pred             CCEECCcCCCeecchHHhhhhcCccCCcC
Confidence            79999999999999999999999999985

>d1x6ea1 g.37.1.1 (A:8-40) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.73  E-value=1.4e-09  Score=71.39  Aligned_cols=32  Identities=25%  Similarity=0.363  Sum_probs=29.1

Q ss_pred             HhhccccccccccCccCCchhhHhhhhhhccC
Q 015460           30 HQKAKHFKCHVCHKKLSTAGGMAIHVLQVHKE   61 (406)
Q Consensus        30 H~REKPfkC~~CgksFss~s~LkrH~rthHge   61 (406)
                      |..||||+|.+|+|+|.++++|++|+|+|+||
T Consensus         2 HTgekpy~C~~Cgk~F~~~~~L~~H~r~HtgE   33 (33)
T d1x6ea1           2 HSGEKPYGCVECGKAFSRSSILVQHQRVHTGE   33 (33)
T ss_dssp             TTTCCCEECSSSCCEESSHHHHHHHHHGGGCS
T ss_pred             cCCCCCeeCCCCCCEeCchHHhHhhccccCCC
Confidence            44589999999999999999999999999886

>d1x6ha2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.64  E-value=2.1e-09  Score=71.95  Aligned_cols=33  Identities=24%  Similarity=0.520  Sum_probs=28.8

Q ss_pred             HhhccccccccccCccCCchhhHhhhhhhccCc
Q 015460           30 HQKAKHFKCHVCHKKLSTAGGMAIHVLQVHKEN   62 (406)
Q Consensus        30 H~REKPfkC~~CgksFss~s~LkrH~rthHgek   62 (406)
                      |..||||+|.+|+++|.++++|++|+++|++++
T Consensus         3 HTgekPy~C~~C~k~F~~~~~L~~H~r~H~~~~   35 (36)
T d1x6ha2           3 HTGEKPYACSHCDKTFRQKQLLDMHFKRYHDPN   35 (36)
T ss_dssp             CCCCCCEECSSSSCEESSHHHHHHHHHHTTCSS
T ss_pred             CCCCCCEECCCCCCCcCCHhHHHHhCcccCCCC
Confidence            444899999999999999999999999998763

>d2epsa1 g.37.1.1 (A:408-446) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.63  E-value=6.2e-09  Score=70.80  Aligned_cols=32  Identities=31%  Similarity=0.627  Sum_probs=29.3

Q ss_pred             CCccc-cCccCcccCChHHHHHHhh-----cccccccc
Q 015460            9 SSKVW-CYYCDREFDDEKILVQHQK-----AKHFKCHV   40 (406)
Q Consensus         9 gEKp~-C~~CgK~Fs~ks~Lk~H~R-----EKPfkC~~   40 (406)
                      .+|+| |++|||.|.+.++|++|++     ||||+|++
T Consensus         2 ~~Kpy~C~~Cgk~F~~~~~L~~H~r~~Ht~ekpy~C~i   39 (39)
T d2epsa1           2 VGKPYICQSCGKGFSRPDHLNGHIKQVHTSERPHKCQV   39 (39)
T ss_dssp             SSCCEECSSSCCEESSHHHHHHHHHHTSCCCCCCCSSS
T ss_pred             CCCCccCCCCCCCcCChHHhhccCcCccCCCcCcCCcC
Confidence            47888 9999999999999999975     99999975

>d1srka_ g.37.1.1 (A:) Zinc finger protein ZFPM1 (FOG-1) {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein ZFPM1 (FOG-1)
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.57  E-value=8.7e-09  Score=68.44  Aligned_cols=29  Identities=21%  Similarity=0.448  Sum_probs=25.9

Q ss_pred             ccccccccccCccCCchhhHhhhhhhccC
Q 015460           33 AKHFKCHVCHKKLSTAGGMAIHVLQVHKE   61 (406)
Q Consensus        33 EKPfkC~~CgksFss~s~LkrH~rthHge   61 (406)
                      ||||+|.+|+|.|+++++|++|+|+|..+
T Consensus         5 ekPy~C~~C~k~F~~~~~L~~H~r~Ht~~   33 (35)
T d1srka_           5 KRPFVCRICLSAFTTKANCARHLKVHTDT   33 (35)
T ss_dssp             CSCEECSSSCCEESSHHHHHHHHGGGTSC
T ss_pred             CccccCCCCCCcccChHHHHHHccccCCc
Confidence            89999999999999999999999888654

>d2ct1a2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.56  E-value=6.9e-09  Score=69.36  Aligned_cols=33  Identities=39%  Similarity=0.906  Sum_probs=28.3

Q ss_pred             HhhccccccccccCccCCchhhHhhhhhhccCc
Q 015460           30 HQKAKHFKCHVCHKKLSTAGGMAIHVLQVHKEN   62 (406)
Q Consensus        30 H~REKPfkC~~CgksFss~s~LkrH~rthHgek   62 (406)
                      |..||||+|++|+++|.++++|++|++++|+++
T Consensus         3 HTgekP~~C~~C~k~F~~~~~L~~H~~~~H~~~   35 (36)
T d2ct1a2           3 HSGEKPYECYICHARFTQSGTMKMHILQKHTEN   35 (36)
T ss_dssp             CSCCCSEECTTTCCEESCHHHHHHHHHHHSSSS
T ss_pred             cCCCCCEeCCCCcccccchHHHHHHcccccCCC
Confidence            444899999999999999999999988888764

>d1x6ea2 g.37.1.1 (A:41-66) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.55  E-value=7.6e-09  Score=64.21  Aligned_cols=26  Identities=31%  Similarity=0.503  Sum_probs=24.0

Q ss_pred             cccccccccCccCCchhhHhhhhhhc
Q 015460           34 KHFKCHVCHKKLSTAGGMAIHVLQVH   59 (406)
Q Consensus        34 KPfkC~~CgksFss~s~LkrH~rthH   59 (406)
                      |||+|.+|||+|.++++|.+|+|+|+
T Consensus         1 KPy~C~eCgK~F~~~s~L~~HqriHT   26 (26)
T d1x6ea2           1 KPYKCLECGKAFSQNSGLINHQRIHT   26 (26)
T ss_dssp             CCEECSSSCCEESSHHHHHHHHHHHH
T ss_pred             CCccCCCCcCeeccCcccccCccCCC
Confidence            79999999999999999999998874

>d1ncsa_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: SWI5 zinc-finger domains
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=98.51  E-value=4.6e-09  Score=74.27  Aligned_cols=38  Identities=18%  Similarity=0.340  Sum_probs=33.3

Q ss_pred             HHHHHHhh---cccccccc--ccCccCCchhhHhhhhhhccCc
Q 015460           25 KILVQHQK---AKHFKCHV--CHKKLSTAGGMAIHVLQVHKEN   62 (406)
Q Consensus        25 s~Lk~H~R---EKPfkC~~--CgksFss~s~LkrH~rthHgek   62 (406)
                      ..|.+|++   ||+|+|.+  |+|+|.++++|++|+++|+|||
T Consensus         5 ~~l~~h~~h~gekpy~C~~~~C~k~F~~~~~L~~H~r~Htgek   47 (47)
T d1ncsa_           5 GSIDKYVKEMPDKTFECLFPGCTKTFKRRYNIRSHIQTHLEDR   47 (47)
T ss_dssp             SSGGGSCEEETTTEEECCCTTCCCEECSSSSHHHHHHHHTTTC
T ss_pred             chhcchhhccCCCCeECCcCCCCccccCchHHHhhcccccCCC
Confidence            34566666   99999988  9999999999999999999985

>d1p7aa_ g.37.1.1 (A:) Kruppel-like factor 3, Bklf {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Kruppel-like factor 3, Bklf
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.51  E-value=1.4e-08  Score=68.12  Aligned_cols=28  Identities=25%  Similarity=0.498  Sum_probs=24.7

Q ss_pred             ccccccccccCccCCchhhHhhhhhhcc
Q 015460           33 AKHFKCHVCHKKLSTAGGMAIHVLQVHK   60 (406)
Q Consensus        33 EKPfkC~~CgksFss~s~LkrH~rthHg   60 (406)
                      ||||+|.+|+++|.++++|++|+++|.+
T Consensus         9 eKPy~C~~C~k~F~~~~~L~~H~r~H~~   36 (37)
T d1p7aa_           9 IKPFQCPDCDRSFSRSDHLALHRKRHML   36 (37)
T ss_dssp             SSSBCCTTTCCCBSSHHHHHHHHGGGTC
T ss_pred             ccCeEeCCCCCEecCHHHHHHHHhcCcC
Confidence            8999999999999999999999888753

>d2glia3 g.37.1.1 (A:168-197) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.46  E-value=2.8e-08  Score=63.70  Aligned_cols=28  Identities=29%  Similarity=0.478  Sum_probs=26.5

Q ss_pred             ccccccc--ccCccCCchhhHhhhhhhccC
Q 015460           34 KHFKCHV--CHKKLSTAGGMAIHVLQVHKE   61 (406)
Q Consensus        34 KPfkC~~--CgksFss~s~LkrH~rthHge   61 (406)
                      |||+|.+  |+|+|.+.++|++|+|+|+||
T Consensus         1 kp~~C~~~gCgk~F~~~~~L~~H~r~HtGE   30 (30)
T d2glia3           1 KPHKCTFEGCRKSYSRLENLKTHLRSHTGE   30 (30)
T ss_dssp             CCCCCCSTTCCCCCSSHHHHHHHHHHTTTC
T ss_pred             CCeeCCCCCCCceECChhHhhhhcCcCcCC
Confidence            7999999  999999999999999999886

>d1ubdc3 g.37.1.1 (C:351-380) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.44  E-value=2.5e-08  Score=63.93  Aligned_cols=28  Identities=29%  Similarity=0.500  Sum_probs=26.3

Q ss_pred             ccccccc--ccCccCCchhhHhhhhhhccC
Q 015460           34 KHFKCHV--CHKKLSTAGGMAIHVLQVHKE   61 (406)
Q Consensus        34 KPfkC~~--CgksFss~s~LkrH~rthHge   61 (406)
                      |||+|.+  |+|+|++.++|++|+|+|+||
T Consensus         1 kp~~C~~~gCgk~F~~~~~L~~H~r~HTGE   30 (30)
T d1ubdc3           1 KPFQCTFEGCGKRFSLDFNLRTHVRIHTGD   30 (30)
T ss_dssp             CCEECCSTTCCCEESCHHHHHHHHHHHHCC
T ss_pred             CCccCCCCCCCceECcHHHcCccccccCCC
Confidence            7999988  999999999999999999886

>d1sp2a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor sp1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.42  E-value=4.5e-08  Score=63.19  Aligned_cols=29  Identities=21%  Similarity=0.447  Sum_probs=26.7

Q ss_pred             ccccccc--ccCccCCchhhHhhhhhhccCc
Q 015460           34 KHFKCHV--CHKKLSTAGGMAIHVLQVHKEN   62 (406)
Q Consensus        34 KPfkC~~--CgksFss~s~LkrH~rthHgek   62 (406)
                      |||+|.+  |+|+|++.++|++|+|+|+|||
T Consensus         1 kpf~C~~~~C~k~F~~~~~L~~H~r~HtgeK   31 (31)
T d1sp2a_           1 RPFMCTWSYCGKRFTRSDELQRHKRTHTGEK   31 (31)
T ss_dssp             CCCBCCSTTCCCBCSSHHHHHHHHTTTSCCC
T ss_pred             CcCCCcCCCCCcCcCChhHhhhhcCcccccC
Confidence            7999964  9999999999999999999885

>d2dlka2 g.37.1.1 (A:38-73) Zinc finger protein 692, ZNF692 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 692, ZNF692
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.41  E-value=3.4e-08  Score=65.93  Aligned_cols=32  Identities=16%  Similarity=0.226  Sum_probs=28.8

Q ss_pred             ccccc--ccCccCCchhhHhhhhhhccCcccccC
Q 015460           36 FKCHV--CHKKLSTAGGMAIHVLQVHKENVTKVP   67 (406)
Q Consensus        36 fkC~~--CgksFss~s~LkrH~rthHgek~~~Cp   67 (406)
                      |.|..  |+|+|.++++|++|+++|+++++|+|.
T Consensus         2 f~C~~~~C~k~F~~~~~L~~H~r~Htgekpy~C~   35 (36)
T d2dlka2           2 FSCPEPACGKSFNFKKHLKEHMKLHSDTRDYICE   35 (36)
T ss_dssp             EECSCTTTCCEESSHHHHHHHHHHHHTSCCCSCC
T ss_pred             eECCCCCCCCeeCChhHhccccCeeCCCCCEeCC
Confidence            78887  999999999999999999999999885

>d1zfda_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: SWI5 zinc-finger domains
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=98.36  E-value=8.6e-08  Score=62.27  Aligned_cols=29  Identities=14%  Similarity=0.391  Sum_probs=26.6

Q ss_pred             cccccccc--ccCccCCchhhHhhhhhhccC
Q 015460           33 AKHFKCHV--CHKKLSTAGGMAIHVLQVHKE   61 (406)
Q Consensus        33 EKPfkC~~--CgksFss~s~LkrH~rthHge   61 (406)
                      ||||+|.+  |+|+|++.++|++|+++|..+
T Consensus         1 ErP~~C~~pgC~k~F~r~~~L~~H~r~Ht~k   31 (32)
T d1zfda_           1 DRPYSCDHPGCDKAFVRNHDLIRHKKSHQEK   31 (32)
T ss_dssp             CCSBCCCCTTCCCCBSSSHHHHHHHGGGTCC
T ss_pred             CcCeECcCCCCCCeeCCHHHHHHHhhhccCC
Confidence            79999999  999999999999999988753

>d1a1ia1 g.37.1.1 (A:103-131) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.21  E-value=1.5e-07  Score=59.74  Aligned_cols=27  Identities=19%  Similarity=0.565  Sum_probs=25.0

Q ss_pred             ccccccc--ccCccCCchhhHhhhhhhcc
Q 015460           34 KHFKCHV--CHKKLSTAGGMAIHVLQVHK   60 (406)
Q Consensus        34 KPfkC~~--CgksFss~s~LkrH~rthHg   60 (406)
                      |||+|.+  |+|+|.+.++|++|+|+|+|
T Consensus         1 Kp~~C~~~gC~k~F~~~~~L~~H~r~HtG   29 (29)
T d1a1ia1           1 RPYACPVESCDRRFSRSADLTRHIRIHTG   29 (29)
T ss_dssp             CCEECCSTTCCCEESSHHHHHHHTHHHHT
T ss_pred             CCeECCCCCCCcEECchhHhhhhcCccCC
Confidence            7999988  99999999999999999875

>d2dmda2 g.37.1.1 (A:8-33) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.18  E-value=3.1e-07  Score=55.06  Aligned_cols=26  Identities=27%  Similarity=0.409  Sum_probs=23.1

Q ss_pred             ccccccccCccCCchhhHhhhhhhcc
Q 015460           35 HFKCHVCHKKLSTAGGMAIHVLQVHK   60 (406)
Q Consensus        35 PfkC~~CgksFss~s~LkrH~rthHg   60 (406)
                      |++|++|+|.|++++.|+.|+|.|+|
T Consensus         1 phkc~~c~kcfsrkdklk~hmr~htg   26 (26)
T d2dmda2           1 PHKCEVCGKCFSRKDKLKTHMRCHTG   26 (26)
T ss_dssp             CCCBTTTTBCCCCHHHHHHHGGGCCC
T ss_pred             CCccchhhhHhcchhHHHHHhhccCC
Confidence            57899999999999999999988864

>d1ubdc4 g.37.1.1 (C:381-408) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.18  E-value=2.7e-07  Score=58.06  Aligned_cols=26  Identities=23%  Similarity=0.629  Sum_probs=24.2

Q ss_pred             ccccccc--ccCccCCchhhHhhhhhhc
Q 015460           34 KHFKCHV--CHKKLSTAGGMAIHVLQVH   59 (406)
Q Consensus        34 KPfkC~~--CgksFss~s~LkrH~rthH   59 (406)
                      |||+|.+  |+|+|.+.++|++|+|+|+
T Consensus         1 rPf~C~~~gC~K~F~~~~~L~~H~r~HT   28 (28)
T d1ubdc4           1 RPYVCPFDGCNKKFAQSTNLKSHILTHA   28 (28)
T ss_dssp             CCCCCCSTTCCCCCSSTTTTHHHHHHHC
T ss_pred             CCcCCCCCCcCCcCCCHHHHHHHHhhcc
Confidence            7999998  9999999999999999884

>d1a1ia3 g.37.1.1 (A:160-187) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.07  E-value=6.1e-07  Score=55.29  Aligned_cols=27  Identities=22%  Similarity=0.453  Sum_probs=24.3

Q ss_pred             ccccccccccCccCCchhhHhhhhhhc
Q 015460           33 AKHFKCHVCHKKLSTAGGMAIHVLQVH   59 (406)
Q Consensus        33 EKPfkC~~CgksFss~s~LkrH~rthH   59 (406)
                      ||||.|++||+.|.+.+..++|.+.|.
T Consensus         1 EkPf~C~~CgrkFArsderkRH~kiH~   27 (28)
T d1a1ia3           1 EKPFACDICGRKFARSDERKRHTKIHL   27 (28)
T ss_dssp             CCCEECTTTCCEESSHHHHHHHHGGGC
T ss_pred             CCCcccchhhhhhhcchhhhhhhhhcc
Confidence            789999999999999999999988774

>d1srka_ g.37.1.1 (A:) Zinc finger protein ZFPM1 (FOG-1) {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein ZFPM1 (FOG-1)
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.07  E-value=7.9e-07  Score=58.75  Aligned_cols=26  Identities=19%  Similarity=0.422  Sum_probs=24.4

Q ss_pred             CCCCccc-cCccCcccCChHHHHHHhh
Q 015460            7 RVSSKVW-CYYCDREFDDEKILVQHQK   32 (406)
Q Consensus         7 r~gEKp~-C~~CgK~Fs~ks~Lk~H~R   32 (406)
                      ..|||+| |++|+|.|.++++|++|+|
T Consensus         2 ~TGekPy~C~~C~k~F~~~~~L~~H~r   28 (35)
T d1srka_           2 SSGKRPFVCRICLSAFTTKANCARHLK   28 (35)
T ss_dssp             CSCCSCEECSSSCCEESSHHHHHHHHG
T ss_pred             CCCCccccCCCCCCcccChHHHHHHcc
Confidence            3589999 9999999999999999987

>d1x6ha2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.06  E-value=1e-06  Score=58.50  Aligned_cols=27  Identities=30%  Similarity=0.652  Sum_probs=25.1

Q ss_pred             cCCCCccc-cCccCcccCChHHHHHHhh
Q 015460            6 KRVSSKVW-CYYCDREFDDEKILVQHQK   32 (406)
Q Consensus         6 kr~gEKp~-C~~CgK~Fs~ks~Lk~H~R   32 (406)
                      .+.|||+| |.+|||+|.++++|++|++
T Consensus         2 ~HTgekPy~C~~C~k~F~~~~~L~~H~r   29 (36)
T d1x6ha2           2 THTGEKPYACSHCDKTFRQKQLLDMHFK   29 (36)
T ss_dssp             TCCCCCCEECSSSSCEESSHHHHHHHHH
T ss_pred             CCCCCCCEECCCCCCCcCCHhHHHHhCc
Confidence            45699999 9999999999999999998

>d1a1ia2 g.37.1.1 (A:132-159) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.03  E-value=9e-07  Score=55.65  Aligned_cols=23  Identities=30%  Similarity=0.650  Sum_probs=21.9

Q ss_pred             Cccc-cCccCcccCChHHHHHHhh
Q 015460           10 SKVW-CYYCDREFDDEKILVQHQK   32 (406)
Q Consensus        10 EKp~-C~~CgK~Fs~ks~Lk~H~R   32 (406)
                      ||+| |.+|||+|.++++|++|+|
T Consensus         1 EKPy~C~~C~k~F~~~~~L~~H~r   24 (28)
T d1a1ia2           1 QKPFQCRICMRNFSRSDHLTTHIR   24 (28)
T ss_dssp             CCCEECTTTCCEESCHHHHHHHHH
T ss_pred             CcCccCCCCcCEecccccccccCC
Confidence            7899 9999999999999999987

>d2ct1a2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.98  E-value=1.5e-06  Score=57.64  Aligned_cols=27  Identities=22%  Similarity=0.551  Sum_probs=24.7

Q ss_pred             cCCCCccc-cCccCcccCChHHHHHHhh
Q 015460            6 KRVSSKVW-CYYCDREFDDEKILVQHQK   32 (406)
Q Consensus         6 kr~gEKp~-C~~CgK~Fs~ks~Lk~H~R   32 (406)
                      .+.|||+| |++|||.|.++++|++|++
T Consensus         2 ~HTgekP~~C~~C~k~F~~~~~L~~H~~   29 (36)
T d2ct1a2           2 THSGEKPYECYICHARFTQSGTMKMHIL   29 (36)
T ss_dssp             CCSCCCSEECTTTCCEESCHHHHHHHHH
T ss_pred             ccCCCCCEeCCCCcccccchHHHHHHcc
Confidence            35699999 9999999999999999975

>d1p7aa_ g.37.1.1 (A:) Kruppel-like factor 3, Bklf {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Kruppel-like factor 3, Bklf
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.97  E-value=2.4e-06  Score=56.93  Aligned_cols=28  Identities=32%  Similarity=0.603  Sum_probs=25.3

Q ss_pred             ccCCCCccc-cCccCcccCChHHHHHHhh
Q 015460            5 KKRVSSKVW-CYYCDREFDDEKILVQHQK   32 (406)
Q Consensus         5 kkr~gEKp~-C~~CgK~Fs~ks~Lk~H~R   32 (406)
                      +.+.+||+| |.+|||.|.++++|++|++
T Consensus         4 R~HTgeKPy~C~~C~k~F~~~~~L~~H~r   32 (37)
T d1p7aa_           4 RGSTGIKPFQCPDCDRSFSRSDHLALHRK   32 (37)
T ss_dssp             STTCCSSSBCCTTTCCCBSSHHHHHHHHG
T ss_pred             CccCCccCeEeCCCCCEecCHHHHHHHHh
Confidence            345699999 9999999999999999986

>d2cota2 g.37.1.1 (A:7-44) Zinc finger and SCAN domain-containing protein 16, ZSCAN16 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger and SCAN domain-containing protein 16, ZSCAN16
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.95  E-value=2.4e-06  Score=57.20  Aligned_cols=28  Identities=18%  Similarity=0.500  Sum_probs=25.4

Q ss_pred             ccCCCCccc-cCccCcccCChHHHHHHhh
Q 015460            5 KKRVSSKVW-CYYCDREFDDEKILVQHQK   32 (406)
Q Consensus         5 kkr~gEKp~-C~~CgK~Fs~ks~Lk~H~R   32 (406)
                      +.+.+||+| |++|||+|.+.++|.+|+|
T Consensus         5 ~~Ht~ekpy~C~~CgK~F~~~s~L~~H~r   33 (38)
T d2cota2           5 WQQRERRRYKCDECGKSFSHSSDLSKHRR   33 (38)
T ss_dssp             SCCCCSCSSBCSSSCCBCSCHHHHHHHHT
T ss_pred             cccCCCCCEecCCCCceeeCHHHHHHhCc
Confidence            445699999 9999999999999999987

>d1x6ea1 g.37.1.1 (A:8-40) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.93  E-value=2e-06  Score=56.08  Aligned_cols=26  Identities=38%  Similarity=0.778  Sum_probs=24.3

Q ss_pred             CCCCccc-cCccCcccCChHHHHHHhh
Q 015460            7 RVSSKVW-CYYCDREFDDEKILVQHQK   32 (406)
Q Consensus         7 r~gEKp~-C~~CgK~Fs~ks~Lk~H~R   32 (406)
                      +.+||+| |.+|||+|.++++|++|+|
T Consensus         2 HTgekpy~C~~Cgk~F~~~~~L~~H~r   28 (33)
T d1x6ea1           2 HSGEKPYGCVECGKAFSRSSILVQHQR   28 (33)
T ss_dssp             TTTCCCEECSSSCCEESSHHHHHHHHH
T ss_pred             cCCCCCeeCCCCCCEeCchHHhHhhcc
Confidence            4589999 9999999999999999987

>d2dlka2 g.37.1.1 (A:38-73) Zinc finger protein 692, ZNF692 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 692, ZNF692
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.93  E-value=1.9e-06  Score=57.23  Aligned_cols=27  Identities=30%  Similarity=0.716  Sum_probs=25.1

Q ss_pred             cCc--cCcccCChHHHHHHhh----cccccccc
Q 015460           14 CYY--CDREFDDEKILVQHQK----AKHFKCHV   40 (406)
Q Consensus        14 C~~--CgK~Fs~ks~Lk~H~R----EKPfkC~~   40 (406)
                      |.+  |||+|.++++|++|++    ||||+|+.
T Consensus         4 C~~~~C~k~F~~~~~L~~H~r~Htgekpy~C~f   36 (36)
T d2dlka2           4 CPEPACGKSFNFKKHLKEHMKLHSDTRDYICEF   36 (36)
T ss_dssp             CSCTTTCCEESSHHHHHHHHHHHHTSCCCSCCS
T ss_pred             CCCCCCCCeeCChhHhccccCeeCCCCCEeCCC
Confidence            876  9999999999999999    99999973

>d1x6ea2 g.37.1.1 (A:41-66) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.90  E-value=2e-06  Score=53.07  Aligned_cols=22  Identities=32%  Similarity=0.798  Sum_probs=20.6

Q ss_pred             ccc-cCccCcccCChHHHHHHhh
Q 015460           11 KVW-CYYCDREFDDEKILVQHQK   32 (406)
Q Consensus        11 Kp~-C~~CgK~Fs~ks~Lk~H~R   32 (406)
                      |+| |.+|||.|.++++|.+|+|
T Consensus         1 KPy~C~eCgK~F~~~s~L~~Hqr   23 (26)
T d1x6ea2           1 KPYKCLECGKAFSQNSGLINHQR   23 (26)
T ss_dssp             CCEECSSSCCEESSHHHHHHHHH
T ss_pred             CCccCCCCcCeeccCcccccCcc
Confidence            578 9999999999999999986

>d2adra1 g.37.1.1 (A:102-130) ADR1 {Synthetic, based on Saccharomyces cerevisiae sequence}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ADR1
species: Synthetic, based on Saccharomyces cerevisiae sequence

Probab=97.84  E-value=3.7e-06  Score=53.13  Aligned_cols=22  Identities=27%  Similarity=0.714  Sum_probs=20.7

Q ss_pred             ccc-cCccCcccCChHHHHHHhh
Q 015460           11 KVW-CYYCDREFDDEKILVQHQK   32 (406)
Q Consensus        11 Kp~-C~~CgK~Fs~ks~Lk~H~R   32 (406)
                      |+| |.+|||.|.+.++|++|+|
T Consensus         1 kp~~C~~C~k~F~~~~~L~~H~r   23 (29)
T d2adra1           1 RSFVCEVCTRAFARQEHLKRHYR   23 (29)
T ss_dssp             CCBCCTTTCCCBSCHHHHHHHHH
T ss_pred             CcCCCCCCCCCCCCchHcccccC
Confidence            577 9999999999999999998

>d1sp1a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor sp1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.79  E-value=4.6e-06  Score=52.73  Aligned_cols=22  Identities=32%  Similarity=0.587  Sum_probs=20.6

Q ss_pred             ccc-cCccCcccCChHHHHHHhh
Q 015460           11 KVW-CYYCDREFDDEKILVQHQK   32 (406)
Q Consensus        11 Kp~-C~~CgK~Fs~ks~Lk~H~R   32 (406)
                      |+| |.+|||.|.++++|.+|+|
T Consensus         1 Kpy~C~~C~k~F~~~s~L~~H~r   23 (29)
T d1sp1a_           1 KKFACPECPKRFMRSDHLSKHIK   23 (29)
T ss_dssp             CCSCCTTTTCCCSCSHHHHHHHH
T ss_pred             CCEECCcCCCeecchHHhhhhcC
Confidence            567 9999999999999999998

>d2epra1 g.37.1.1 (A:350-384) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.64  E-value=7.7e-06  Score=52.22  Aligned_cols=31  Identities=23%  Similarity=0.354  Sum_probs=23.8

Q ss_pred             cccccccccCccCCchhhHhhhhhhccCccc
Q 015460           34 KHFKCHVCHKKLSTAGGMAIHVLQVHKENVT   64 (406)
Q Consensus        34 KPfkC~~CgksFss~s~LkrH~rthHgek~~   64 (406)
                      |...|+.|||.|.....|++|...|.+||+|
T Consensus         4 k~~~ce~cgk~frdvyhlnrhklshs~ekpy   34 (35)
T d2epra1           4 KQVACEICGKIFRDVYHLNRHKLSHSGEKPY   34 (35)
T ss_dssp             CSEEETTTTEEESSHHHHHHHGGGSCSCCCC
T ss_pred             hhhhHHHHHHHHHHHHHHHhhhcccCCCCCC
Confidence            4566888888888888888888788888765

>d1ubdc2 g.37.1.1 (C:323-350) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.59  E-value=1.2e-05  Score=48.98  Aligned_cols=28  Identities=21%  Similarity=0.348  Sum_probs=23.8

Q ss_pred             cccccccccCccCCchhhHhhhhhhccC
Q 015460           34 KHFKCHVCHKKLSTAGGMAIHVLQVHKE   61 (406)
Q Consensus        34 KPfkC~~CgksFss~s~LkrH~rthHge   61 (406)
                      |-+.|.+|||+|...+.|+||+..|+||
T Consensus         1 r~hvc~ecgkaf~essklkrh~lvhtge   28 (28)
T d1ubdc2           1 RVHVCAECGKAFVESSKLKRHQLVHTGE   28 (28)
T ss_dssp             CCEECTTTCCEESSHHHHHHHGGGTSCC
T ss_pred             CcchHHHHhHHHHHHHHHHHHhhcccCC
Confidence            3468999999999999999999888764

>d2epqa1 g.37.1.1 (A:380-411) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.48  E-value=1.8e-05  Score=49.47  Aligned_cols=29  Identities=24%  Similarity=0.484  Sum_probs=26.6

Q ss_pred             ccccccccccCccCCchhhHhhhhhhccC
Q 015460           33 AKHFKCHVCHKKLSTAGGMAIHVLQVHKE   61 (406)
Q Consensus        33 EKPfkC~~CgksFss~s~LkrH~rthHge   61 (406)
                      ||||.|.+|+.+|.+++-+..|.|.|.|.
T Consensus         1 ekp~~cpic~qrfkrkdrmsyhvrshdg~   29 (32)
T d2epqa1           1 EKPYSCPVCGLRFKRKDRMSYHVRSHDGS   29 (32)
T ss_dssp             CCSSEETTTTEECSCHHHHHHHHHHHSCC
T ss_pred             CCCcccchHHHHhhccccceEeeecccCc
Confidence            78999999999999999999999988764

>d1zfda_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: SWI5 zinc-finger domains
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=97.45  E-value=2.8e-05  Score=50.06  Aligned_cols=23  Identities=30%  Similarity=0.749  Sum_probs=21.6

Q ss_pred             Cccc-cCc--cCcccCChHHHHHHhh
Q 015460           10 SKVW-CYY--CDREFDDEKILVQHQK   32 (406)
Q Consensus        10 EKp~-C~~--CgK~Fs~ks~Lk~H~R   32 (406)
                      ||+| |.+  |||.|.+.++|++|++
T Consensus         1 ErP~~C~~pgC~k~F~r~~~L~~H~r   26 (32)
T d1zfda_           1 DRPYSCDHPGCDKAFVRNHDLIRHKK   26 (32)
T ss_dssp             CCSBCCCCTTCCCCBSSSHHHHHHHG
T ss_pred             CcCeECcCCCCCCeeCCHHHHHHHhh
Confidence            6788 998  9999999999999987

>d1ncsa_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: SWI5 zinc-finger domains
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=97.43  E-value=1.2e-05  Score=56.28  Aligned_cols=28  Identities=21%  Similarity=0.610  Sum_probs=25.2

Q ss_pred             ccCCCCccc-cCc--cCcccCChHHHHHHhh
Q 015460            5 KKRVSSKVW-CYY--CDREFDDEKILVQHQK   32 (406)
Q Consensus         5 kkr~gEKp~-C~~--CgK~Fs~ks~Lk~H~R   32 (406)
                      .+..+||+| |.+  |+|.|.++++|++|++
T Consensus        11 ~~h~gekpy~C~~~~C~k~F~~~~~L~~H~r   41 (47)
T d1ncsa_          11 VKEMPDKTFECLFPGCTKTFKRRYNIRSHIQ   41 (47)
T ss_dssp             CEEETTTEEECCCTTCCCEECSSSSHHHHHH
T ss_pred             hhccCCCCeECCcCCCCccccCchHHHhhcc
Confidence            346699999 988  9999999999999988

>d2dmda3 g.37.1.1 (A:62-90) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.37  E-value=3e-05  Score=47.38  Aligned_cols=29  Identities=17%  Similarity=0.527  Sum_probs=26.6

Q ss_pred             ccccccccccCccCCchhhHhhhhhhccC
Q 015460           33 AKHFKCHVCHKKLSTAGGMAIHVLQVHKE   61 (406)
Q Consensus        33 EKPfkC~~CgksFss~s~LkrH~rthHge   61 (406)
                      ||||||+.|...-...+.|..|.|+|+|+
T Consensus         1 erpfkcqlcsy~srnssqltvhlr~htgd   29 (29)
T d2dmda3           1 ERPFKCQICPYASRNSSQLTVHLRSHTGD   29 (29)
T ss_dssp             CCCEECSSSSCEESSHHHHHHHHTTCCSC
T ss_pred             CCcceeeecccccCCchheEEeeecccCc
Confidence            68999999999999999999999999874

>d2glia3 g.37.1.1 (A:168-197) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.30  E-value=5.2e-05  Score=48.08  Aligned_cols=22  Identities=23%  Similarity=0.602  Sum_probs=20.3

Q ss_pred             ccc-cCc--cCcccCChHHHHHHhh
Q 015460           11 KVW-CYY--CDREFDDEKILVQHQK   32 (406)
Q Consensus        11 Kp~-C~~--CgK~Fs~ks~Lk~H~R   32 (406)
                      |+| |.+  |||+|.++++|++|+|
T Consensus         1 kp~~C~~~gCgk~F~~~~~L~~H~r   25 (30)
T d2glia3           1 KPHKCTFEGCRKSYSRLENLKTHLR   25 (30)
T ss_dssp             CCCCCCSTTCCCCCSSHHHHHHHHH
T ss_pred             CCeeCCCCCCCceECChhHhhhhcC
Confidence            467 998  9999999999999987

>d1ubdc3 g.37.1.1 (C:351-380) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.26  E-value=5.1e-05  Score=48.09  Aligned_cols=22  Identities=27%  Similarity=0.662  Sum_probs=20.2

Q ss_pred             ccc-cCc--cCcccCChHHHHHHhh
Q 015460           11 KVW-CYY--CDREFDDEKILVQHQK   32 (406)
Q Consensus        11 Kp~-C~~--CgK~Fs~ks~Lk~H~R   32 (406)
                      |+| |.+  |||+|.++++|++|+|
T Consensus         1 kp~~C~~~gCgk~F~~~~~L~~H~r   25 (30)
T d1ubdc3           1 KPFQCTFEGCGKRFSLDFNLRTHVR   25 (30)
T ss_dssp             CCEECCSTTCCCEESCHHHHHHHHH
T ss_pred             CCccCCCCCCCceECcHHHcCcccc
Confidence            567 988  9999999999999987

>d1a1ia3 g.37.1.1 (A:160-187) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.26  E-value=6e-05  Score=46.26  Aligned_cols=23  Identities=30%  Similarity=0.608  Sum_probs=21.4

Q ss_pred             Cccc-cCccCcccCChHHHHHHhh
Q 015460           10 SKVW-CYYCDREFDDEKILVQHQK   32 (406)
Q Consensus        10 EKp~-C~~CgK~Fs~ks~Lk~H~R   32 (406)
                      ||++ |++||+.|.+....++|.+
T Consensus         1 EkPf~C~~CgrkFArsderkRH~k   24 (28)
T d1a1ia3           1 EKPFACDICGRKFARSDERKRHTK   24 (28)
T ss_dssp             CCCEECTTTCCEESSHHHHHHHHG
T ss_pred             CCCcccchhhhhhhcchhhhhhhh
Confidence            6888 9999999999999999975

>d2glia5 g.37.1.1 (A:229-257) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.23  E-value=5e-05  Score=47.19  Aligned_cols=27  Identities=30%  Similarity=0.677  Sum_probs=24.4

Q ss_pred             ccccccc--ccCccCCchhhHhhhhhhcc
Q 015460           34 KHFKCHV--CHKKLSTAGGMAIHVLQVHK   60 (406)
Q Consensus        34 KPfkC~~--CgksFss~s~LkrH~rthHg   60 (406)
                      |||.|.+  |+|+++..+.|++|++.+||
T Consensus         1 KPY~Ck~~gC~K~YtdPSSLRKH~k~~HG   29 (29)
T d2glia5           1 KPYVCKLPGCTKRYTDPSSLRKHVKTVHG   29 (29)
T ss_dssp             CCEECCSTTTCCEESSHHHHHHHHHHSCC
T ss_pred             CCeecccCCCCcccCCHHHHHHHHHhhCC
Confidence            6899988  99999999999999998886

>d1znfa_ g.37.1.1 (A:) XFIN, third domain {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: XFIN, third domain
species: Xenopus laevis [TaxId: 8355]

Probab=97.20  E-value=8.1e-05  Score=44.02  Aligned_cols=24  Identities=17%  Similarity=0.517  Sum_probs=20.8

Q ss_pred             cccccccCccCCchhhHhhhhhhc
Q 015460           36 FKCHVCHKKLSTAGGMAIHVLQVH   59 (406)
Q Consensus        36 fkC~~CgksFss~s~LkrH~rthH   59 (406)
                      |+|..|.++|..++.|.+|+|.|.
T Consensus         1 ykcglcersfveksalsrhqrvhk   24 (26)
T d1znfa_           1 YKCGLCERSFVEKSALSRHQRVHK   24 (26)
T ss_dssp             CBCSSSCCBCSSHHHHHHHGGGTC
T ss_pred             CcccchHHHHHHHHHHHHHHHhhc
Confidence            789999999999999999987663

>d1ubdc4 g.37.1.1 (C:381-408) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.15  E-value=5.6e-05  Score=47.21  Aligned_cols=22  Identities=23%  Similarity=0.692  Sum_probs=20.0

Q ss_pred             ccc-cCc--cCcccCChHHHHHHhh
Q 015460           11 KVW-CYY--CDREFDDEKILVQHQK   32 (406)
Q Consensus        11 Kp~-C~~--CgK~Fs~ks~Lk~H~R   32 (406)
                      |+| |.+  |||.|.+.++|++|+|
T Consensus         1 rPf~C~~~gC~K~F~~~~~L~~H~r   25 (28)
T d1ubdc4           1 RPYVCPFDGCNKKFAQSTNLKSHIL   25 (28)
T ss_dssp             CCCCCCSTTCCCCCSSTTTTHHHHH
T ss_pred             CCcCCCCCCcCCcCCCHHHHHHHHh
Confidence            467 988  9999999999999986

>d2dlqa4 g.37.1.1 (A:8-34) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.12  E-value=0.0001  Score=44.20  Aligned_cols=26  Identities=27%  Similarity=0.489  Sum_probs=23.9

Q ss_pred             ccccccCccCCchhhHhhhhhhccCc
Q 015460           37 KCHVCHKKLSTAGGMAIHVLQVHKEN   62 (406)
Q Consensus        37 kC~~CgksFss~s~LkrH~rthHgek   62 (406)
                      .|..|+|+|.++..|+.|-|.|+||+
T Consensus         2 qcp~c~k~f~skyylkvhnr~htgek   27 (27)
T d2dlqa4           2 ECPTCHKKFLSKYYLKVHNRKHTGEK   27 (27)
T ss_dssp             CCTTTCCCCSSHHHHHHHHHHHSSCC
T ss_pred             cCcchHHHHHHhHhhhhccccccCCC
Confidence            69999999999999999999999875

>d2dmda2 g.37.1.1 (A:8-33) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.10  E-value=0.00013  Score=43.51  Aligned_cols=19  Identities=26%  Similarity=0.628  Sum_probs=18.5

Q ss_pred             cCccCcccCChHHHHHHhh
Q 015460           14 CYYCDREFDDEKILVQHQK   32 (406)
Q Consensus        14 C~~CgK~Fs~ks~Lk~H~R   32 (406)
                      |++|||.|+++..|+.|+|
T Consensus         4 c~~c~kcfsrkdklk~hmr   22 (26)
T d2dmda2           4 CEVCGKCFSRKDKLKTHMR   22 (26)
T ss_dssp             BTTTTBCCCCHHHHHHHGG
T ss_pred             cchhhhHhcchhHHHHHhh
Confidence            9999999999999999987

>d1sp2a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor sp1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.10  E-value=0.00012  Score=46.63  Aligned_cols=22  Identities=27%  Similarity=0.841  Sum_probs=19.5

Q ss_pred             ccc-cC--ccCcccCChHHHHHHhh
Q 015460           11 KVW-CY--YCDREFDDEKILVQHQK   32 (406)
Q Consensus        11 Kp~-C~--~CgK~Fs~ks~Lk~H~R   32 (406)
                      |+| |.  .|||+|.+.++|++|+|
T Consensus         1 kpf~C~~~~C~k~F~~~~~L~~H~r   25 (31)
T d1sp2a_           1 RPFMCTWSYCGKRFTRSDELQRHKR   25 (31)
T ss_dssp             CCCBCCSTTCCCBCSSHHHHHHHHT
T ss_pred             CcCCCcCCCCCcCcCChhHhhhhcC
Confidence            466 96  59999999999999998

>d1a1ia1 g.37.1.1 (A:103-131) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.07  E-value=0.0001  Score=46.37  Aligned_cols=22  Identities=32%  Similarity=0.744  Sum_probs=20.0

Q ss_pred             ccc-cCc--cCcccCChHHHHHHhh
Q 015460           11 KVW-CYY--CDREFDDEKILVQHQK   32 (406)
Q Consensus        11 Kp~-C~~--CgK~Fs~ks~Lk~H~R   32 (406)
                      |+| |.+  |||+|.+.++|++|+|
T Consensus         1 Kp~~C~~~gC~k~F~~~~~L~~H~r   25 (29)
T d1a1ia1           1 RPYACPVESCDRRFSRSADLTRHIR   25 (29)
T ss_dssp             CCEECCSTTCCCEESSHHHHHHHTH
T ss_pred             CCeECCCCCCCcEECchhHhhhhcC
Confidence            467 988  9999999999999986

>d1klra_ g.37.1.1 (A:) ZFY {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZFY
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.94  E-value=0.00024  Score=43.74  Aligned_cols=28  Identities=18%  Similarity=0.568  Sum_probs=25.0

Q ss_pred             cccccccccCccCCchhhHhhhhhhccC
Q 015460           34 KHFKCHVCHKKLSTAGGMAIHVLQVHKE   61 (406)
Q Consensus        34 KPfkC~~CgksFss~s~LkrH~rthHge   61 (406)
                      |||.|.+|..+....++|+.|+++.|+.
T Consensus         1 kpy~cqyc~yrsadssnlkthiktkhsk   28 (30)
T d1klra_           1 KTYQCQYCEFRSADSSNLKTHIKTKHSK   28 (30)
T ss_dssp             CCCCCSSSSCCCSCSHHHHHHHHHHTSS
T ss_pred             CCccccccccccccchhhhhhhhccccc
Confidence            6899999999999999999999988764

>d2epra1 g.37.1.1 (A:350-384) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.84  E-value=0.00028  Score=44.87  Aligned_cols=24  Identities=29%  Similarity=0.569  Sum_probs=22.0

Q ss_pred             cCccCcccCChHHHHHHhh----ccccc
Q 015460           14 CYYCDREFDDEKILVQHQK----AKHFK   37 (406)
Q Consensus        14 C~~CgK~Fs~ks~Lk~H~R----EKPfk   37 (406)
                      |+.|||.|.+..+|.+|.-    ||||.
T Consensus         8 ce~cgk~frdvyhlnrhklshs~ekpys   35 (35)
T d2epra1           8 CEICGKIFRDVYHLNRHKLSHSGEKPYS   35 (35)
T ss_dssp             ETTTTEEESSHHHHHHHGGGSCSCCCCC
T ss_pred             HHHHHHHHHHHHHHHhhhcccCCCCCCC
Confidence            9999999999999999976    88873

>d1bboa1 g.37.1.1 (A:1-28) Enhancer binding protein {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Enhancer binding protein
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.75  E-value=0.00035  Score=42.71  Aligned_cols=28  Identities=11%  Similarity=0.291  Sum_probs=24.3

Q ss_pred             ccccccccCccCCchhhHhhhhhhccCc
Q 015460           35 HFKCHVCHKKLSTAGGMAIHVLQVHKEN   62 (406)
Q Consensus        35 PfkC~~CgksFss~s~LkrH~rthHgek   62 (406)
                      .|.|.+|+......+-|+.|+|+|++++
T Consensus         1 kYvC~~Cg~~C~KPSvL~KHIRsHT~~R   28 (28)
T d1bboa1           1 KYICEECGIRAKKPSMLKKHIRTHTDVR   28 (28)
T ss_dssp             CCBCTTTCCBCSSHHHHHHHHHHTSSCC
T ss_pred             CccccccCcccCCHHHHHHHHHHhcCCC
Confidence            3789999999999999999999998763

>d2dmda1 g.37.1.1 (A:34-61) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.67  E-value=0.00031  Score=42.48  Aligned_cols=27  Identities=19%  Similarity=0.442  Sum_probs=23.8

Q ss_pred             ccccccccccCccCCchhhHhhhhhhc
Q 015460           33 AKHFKCHVCHKKLSTAGGMAIHVLQVH   59 (406)
Q Consensus        33 EKPfkC~~CgksFss~s~LkrH~rthH   59 (406)
                      .|||+|..|+..-...+.|+.|+|+|.
T Consensus         1 vkp~kck~cdyaaadsssl~kh~rihs   27 (28)
T d2dmda1           1 VKPYKCKTCDYAAADSSSLNKHLRIHS   27 (28)
T ss_dssp             CCSEECSSSCCEESSHHHHHHHHHHSC
T ss_pred             CCCcccccccchhcchhhHhhhhhccc
Confidence            379999999999999999999998874

>d2adra2 g.37.1.1 (A:131-161) ADR1 {Synthetic, based on Saccharomyces cerevisiae sequence}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ADR1
species: Synthetic, based on Saccharomyces cerevisiae sequence

Probab=96.63  E-value=0.00033  Score=43.81  Aligned_cols=27  Identities=15%  Similarity=0.528  Sum_probs=23.3

Q ss_pred             ccccccccCccCCchhhHhhhhhhccC
Q 015460           35 HFKCHVCHKKLSTAGGMAIHVLQVHKE   61 (406)
Q Consensus        35 PfkC~~CgksFss~s~LkrH~rthHge   61 (406)
                      ||.|.+|++.|.+++.|.||+..-|+.
T Consensus         1 Pf~C~~C~R~FaRrDLlLRH~qKlH~g   27 (31)
T d2adra2           1 PYPCGLCNRAFTRRDLLIRHAQKIHSG   27 (31)
T ss_dssp             SEECTTTCCEESSHHHHHHHHTTTSCC
T ss_pred             CcccccccchhhHHHHHHHHHHHHhcC
Confidence            689999999999999999998666554

>d1x5wa2 g.37.1.1 (A:36-64) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.42  E-value=0.00054  Score=41.99  Aligned_cols=28  Identities=21%  Similarity=0.576  Sum_probs=25.1

Q ss_pred             cccccccccCccCCchhhHhhhhhhccC
Q 015460           34 KHFKCHVCHKKLSTAGGMAIHVLQVHKE   61 (406)
Q Consensus        34 KPfkC~~CgksFss~s~LkrH~rthHge   61 (406)
                      |||+|..|.---.+.++|..|++..|++
T Consensus         1 rPFkC~~CsFDtkq~SnL~kH~kk~H~D   28 (29)
T d1x5wa2           1 RPFKCNYCSFDTKQPSNLSKHMKKFHGD   28 (29)
T ss_dssp             CSEECSSSSCEESSHHHHHHHHHHHHSS
T ss_pred             CCcccceecccccCcchHHHHHHHHccC
Confidence            6899999998889999999999888875

>d1tf3a2 g.37.1.1 (A:41-70) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=96.27  E-value=0.00079  Score=41.28  Aligned_cols=28  Identities=29%  Similarity=0.523  Sum_probs=24.8

Q ss_pred             ccccccc--ccCccCCchhhHhhhhhhccC
Q 015460           34 KHFKCHV--CHKKLSTAGGMAIHVLQVHKE   61 (406)
Q Consensus        34 KPfkC~~--CgksFss~s~LkrH~rthHge   61 (406)
                      |||.|.+  |.|.|.+...|.||..+|+||
T Consensus         1 ~pfpc~~egc~kgf~tlhhltrhs~thtge   30 (30)
T d1tf3a2           1 KPFPCKEEGCEKGFTSLHHLTRHSLTHTGE   30 (30)
T ss_dssp             CSEECCCSSCCCEESSTTHHHHHHHHHHTC
T ss_pred             CCcCcccccccccchhhhhhhhhhccccCC
Confidence            6888877  999999999999999888875

>d2j7ja2 g.37.1.1 (A:29-57) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=96.26  E-value=0.00067  Score=41.38  Aligned_cols=25  Identities=20%  Similarity=0.406  Sum_probs=19.2

Q ss_pred             ccccccc--ccCccCCchhhHhhhhhh
Q 015460           34 KHFKCHV--CHKKLSTAGGMAIHVLQV   58 (406)
Q Consensus        34 KPfkC~~--CgksFss~s~LkrH~rth   58 (406)
                      .||+|..  |+++|...+.|+||.+.|
T Consensus         2 ~py~c~hegcdk~fs~ps~lkrhekvh   28 (29)
T d2j7ja2           2 LPYECPHEGCDKRFSLPSRLKRHEKVH   28 (29)
T ss_dssp             CCEECCSTTCCCEESSHHHHHHHHHHH
T ss_pred             CCccCCccCccccccCHHHHhhhhhcc
Confidence            4778866  888888888888887655

>d2dlqa3 g.37.1.1 (A:63-92) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=96.05  E-value=0.0012  Score=40.27  Aligned_cols=29  Identities=21%  Similarity=0.539  Sum_probs=25.3

Q ss_pred             ccccccccccCccCCchhhHhhhhhhccC
Q 015460           33 AKHFKCHVCHKKLSTAGGMAIHVLQVHKE   61 (406)
Q Consensus        33 EKPfkC~~CgksFss~s~LkrH~rthHge   61 (406)
                      |.-|.|..|...|.++-.|+.|+-.|+|+
T Consensus         2 eqvftcs~cqe~f~rrmelr~hmvshtge   30 (30)
T d2dlqa3           2 EQVFTCSVCQETFRRRMELRLHMVSHTGE   30 (30)
T ss_dssp             CCCEECSSSCCEESSHHHHHHHHHHHSSS
T ss_pred             cceEEeHHHHHHHHHHHhheeeeecccCC
Confidence            45689999999999999999999888875

>d2glia4 g.37.1.1 (A:198-228) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.02  E-value=0.0012  Score=41.28  Aligned_cols=27  Identities=30%  Similarity=0.456  Sum_probs=22.3

Q ss_pred             ccccccc--ccCccCCchhhHhhh-hhhcc
Q 015460           34 KHFKCHV--CHKKLSTAGGMAIHV-LQVHK   60 (406)
Q Consensus        34 KPfkC~~--CgksFss~s~LkrH~-rthHg   60 (406)
                      |||.|++  |.|+|+..++-..|+ |+|..
T Consensus         1 kPY~C~~~gC~KafsNsSDraKHqnRTHs~   30 (31)
T d2glia4           1 KPYMCEHEGCSKAFSNASDRAKHQNRTHSN   30 (31)
T ss_dssp             CCEECCSTTCCCEESSSSTTHHHHHHTTCS
T ss_pred             CCccccCCChhhhhcchhhhhhhccccccC
Confidence            6899988  999999999999997 66643

>d1ubdc2 g.37.1.1 (C:323-350) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.83  E-value=0.0019  Score=39.08  Aligned_cols=19  Identities=32%  Similarity=0.637  Sum_probs=17.9

Q ss_pred             cCccCcccCChHHHHHHhh
Q 015460           14 CYYCDREFDDEKILVQHQK   32 (406)
Q Consensus        14 C~~CgK~Fs~ks~Lk~H~R   32 (406)
                      |.+|||.|...+.|++|+-
T Consensus         5 c~ecgkaf~essklkrh~l   23 (28)
T d1ubdc2           5 CAECGKAFVESSKLKRHQL   23 (28)
T ss_dssp             CTTTCCEESSHHHHHHHGG
T ss_pred             HHHHhHHHHHHHHHHHHhh
Confidence            9999999999999999964

>d1njqa_ g.37.1.3 (A:) SUPERMAN zinc finger domain {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Plant C2H2 finger (QALGGH zinc finger)
domain: SUPERMAN zinc finger domain
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=95.82  E-value=0.0017  Score=42.67  Aligned_cols=29  Identities=14%  Similarity=0.535  Sum_probs=22.3

Q ss_pred             cccccccccCccCCchhhHhhhhhhccCc
Q 015460           34 KHFKCHVCHKKLSTAGGMAIHVLQVHKEN   62 (406)
Q Consensus        34 KPfkC~~CgksFss~s~LkrH~rthHgek   62 (406)
                      |.|+|.+|++.|.+-..|=-|++.|..++
T Consensus         4 r~~~C~~C~k~F~s~qALGGH~~~Hr~~r   32 (37)
T d1njqa_           4 RSYTCSFCKREFRSAQALGGHMNVHRRDR   32 (37)
T ss_dssp             SSEECTTTCCEESSHHHHHHHHHTTCCSC
T ss_pred             CccCCCCCCCccCCcccccchHhhhcchH
Confidence            56888888888888888888887775543

>d1bhia_ g.37.1.1 (A:) Transactivation domain of cre-bp1/atf-2 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transactivation domain of cre-bp1/atf-2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.41  E-value=0.0025  Score=41.78  Aligned_cols=27  Identities=22%  Similarity=0.564  Sum_probs=20.9

Q ss_pred             cccccccc--ccCccCCchhhHhhhhhhc
Q 015460           33 AKHFKCHV--CHKKLSTAGGMAIHVLQVH   59 (406)
Q Consensus        33 EKPfkC~~--CgksFss~s~LkrH~rthH   59 (406)
                      +|||.|..  |+.+|...+.|..|++.|.
T Consensus         4 dkPF~C~~pGC~q~F~neDhL~vHk~KH~   32 (38)
T d1bhia_           4 DKPFLCTAPGCGQRFTNEDHLAVHKHKHE   32 (38)
T ss_dssp             CCCEECCCTTTCCEESSHHHHHHHHHHHH
T ss_pred             CCceecCCCCccccccchHHHHHhhhhhe
Confidence            68888855  8888888888888876553

>d2epqa1 g.37.1.1 (A:380-411) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.41  E-value=0.0036  Score=38.81  Aligned_cols=23  Identities=22%  Similarity=0.531  Sum_probs=21.4

Q ss_pred             Cccc-cCccCcccCChHHHHHHhh
Q 015460           10 SKVW-CYYCDREFDDEKILVQHQK   32 (406)
Q Consensus        10 EKp~-C~~CgK~Fs~ks~Lk~H~R   32 (406)
                      ||+| |.+|+.+|.++..+.-|.|
T Consensus         1 ekp~~cpic~qrfkrkdrmsyhvr   24 (32)
T d2epqa1           1 EKPYSCPVCGLRFKRKDRMSYHVR   24 (32)
T ss_dssp             CCSSEETTTTEECSCHHHHHHHHH
T ss_pred             CCCcccchHHHHhhccccceEeee
Confidence            6888 9999999999999999977

>d2csha2 g.37.1.1 (A:61-104) Zinc finger protein 297b {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 297b
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.37  E-value=0.0025  Score=42.48  Aligned_cols=22  Identities=27%  Similarity=0.691  Sum_probs=19.0

Q ss_pred             cccccccccCccCCchhhHhhh
Q 015460           34 KHFKCHVCHKKLSTAGGMAIHV   55 (406)
Q Consensus        34 KPfkC~~CgksFss~s~LkrH~   55 (406)
                      |||.|..|+|.|..++.+.+|.
T Consensus         4 KPYeC~~C~KrFMWRDSF~RH~   25 (44)
T d2csha2           4 KPYECNICAKRFMWRDSFHRHV   25 (44)
T ss_dssp             CCEECSSSCCEESCHHHHHHHH
T ss_pred             CceeccchhhhhhhHHHHHHhh
Confidence            7888888888888888888885

>d1bboa2 g.37.1.1 (A:29-57) Enhancer binding protein {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Enhancer binding protein
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.16  E-value=0.0039  Score=38.02  Aligned_cols=23  Identities=22%  Similarity=0.615  Sum_probs=17.3

Q ss_pred             ccccccccCccCCchhhHhhhhh
Q 015460           35 HFKCHVCHKKLSTAGGMAIHVLQ   57 (406)
Q Consensus        35 PfkC~~CgksFss~s~LkrH~rt   57 (406)
                      ||.|..|.-+|.++.+|..|++.
T Consensus         1 py~C~~CnF~FKTKGNLTKHmkS   23 (29)
T d1bboa2           1 PYHCTYCNFSFKTKGNLTKHMKS   23 (29)
T ss_dssp             CEECSSSSCEESSHHHHHHHHHS
T ss_pred             CcccceeeeeEeeccchhHhhhh
Confidence            57777787788888888777754

>d2dlqa2 g.37.1.1 (A:35-62) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=94.93  E-value=0.0054  Score=36.81  Aligned_cols=21  Identities=24%  Similarity=0.406  Sum_probs=18.9

Q ss_pred             ccccccccCccCCchhhHhhh
Q 015460           35 HFKCHVCHKKLSTAGGMAIHV   55 (406)
Q Consensus        35 PfkC~~CgksFss~s~LkrH~   55 (406)
                      ||+|..|||.+-++.+|..|.
T Consensus         1 pf~c~kcgkcyfrkenllehe   21 (28)
T d2dlqa2           1 PFECPKCGKCYFRKENLLEHE   21 (28)
T ss_dssp             SCBCTTTCCBCSSHHHHHHHH
T ss_pred             CCccccchhhhhhHhHHHHHH
Confidence            689999999999999999886

>d1x6ha1 g.37.1.1 (A:44-80) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.79  E-value=0.0049  Score=39.33  Aligned_cols=26  Identities=27%  Similarity=0.446  Sum_probs=21.4

Q ss_pred             ccccccccCccCCchhhHhhhhhhcc
Q 015460           35 HFKCHVCHKKLSTAGGMAIHVLQVHK   60 (406)
Q Consensus        35 PfkC~~CgksFss~s~LkrH~rthHg   60 (406)
                      -|.|.+|+|+|+++..+.+|.....|
T Consensus         4 afvcskcgktftrrntm~rha~nc~g   29 (37)
T d1x6ha1           4 AFVCSKCGKTFTRRNTMARHADNCAG   29 (37)
T ss_dssp             CEECSSSCCEESCHHHHHHHHHHCCC
T ss_pred             eeeecccccchhcchHHHHHhhhcCC
Confidence            48899999999999999999755444

>d1klra_ g.37.1.1 (A:) ZFY {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZFY
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.72  E-value=0.0087  Score=36.60  Aligned_cols=22  Identities=36%  Similarity=0.682  Sum_probs=20.5

Q ss_pred             ccc-cCccCcccCChHHHHHHhh
Q 015460           11 KVW-CYYCDREFDDEKILVQHQK   32 (406)
Q Consensus        11 Kp~-C~~CgK~Fs~ks~Lk~H~R   32 (406)
                      |+| |++|..+..+.++|+.|++
T Consensus         1 kpy~cqyc~yrsadssnlkthik   23 (30)
T d1klra_           1 KTYQCQYCEFRSADSSNLKTHIK   23 (30)
T ss_dssp             CCCCCSSSSCCCSCSHHHHHHHH
T ss_pred             CCccccccccccccchhhhhhhh
Confidence            578 9999999999999999987

>d2csha2 g.37.1.1 (A:61-104) Zinc finger protein 297b {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 297b
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.70  E-value=0.0054  Score=40.82  Aligned_cols=24  Identities=21%  Similarity=0.443  Sum_probs=22.2

Q ss_pred             CCccc-cCccCcccCChHHHHHHhh
Q 015460            9 SSKVW-CYYCDREFDDEKILVQHQK   32 (406)
Q Consensus         9 gEKp~-C~~CgK~Fs~ks~Lk~H~R   32 (406)
                      |-|+| |..|+|.|-++..+.+|..
T Consensus         2 GiKPYeC~~C~KrFMWRDSF~RH~~   26 (44)
T d2csha2           2 GIKPYECNICAKRFMWRDSFHRHVT   26 (44)
T ss_dssp             CCCCEECSSSCCEESCHHHHHHHHH
T ss_pred             CCCceeccchhhhhhhHHHHHHhhh
Confidence            67899 9999999999999999975

>d2dlqa1 g.37.1.1 (A:93-118) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=94.60  E-value=0.0064  Score=35.70  Aligned_cols=22  Identities=18%  Similarity=0.640  Sum_probs=19.6

Q ss_pred             ccccccccCccCCchhhHhhhh
Q 015460           35 HFKCHVCHKKLSTAGGMAIHVL   56 (406)
Q Consensus        35 PfkC~~CgksFss~s~LkrH~r   56 (406)
                      ||+|..|...|.++.+|+.|+-
T Consensus         2 pykcsscsqqfmqkkdlqshmi   23 (26)
T d2dlqa1           2 PYKCSSCSQQFMQKKDLQSHMI   23 (26)
T ss_dssp             SEECSSSCCEESSHHHHHHHHH
T ss_pred             CCcccHHHHHHHHHHHHHHHHH
Confidence            7899999999999999999974

>d1znfa_ g.37.1.1 (A:) XFIN, third domain {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: XFIN, third domain
species: Xenopus laevis [TaxId: 8355]

Probab=94.38  E-value=0.012  Score=34.49  Aligned_cols=19  Identities=37%  Similarity=0.873  Sum_probs=18.4

Q ss_pred             cCccCcccCChHHHHHHhh
Q 015460           14 CYYCDREFDDEKILVQHQK   32 (406)
Q Consensus        14 C~~CgK~Fs~ks~Lk~H~R   32 (406)
                      |..|.+.|..++.|.+|+|
T Consensus         3 cglcersfveksalsrhqr   21 (26)
T d1znfa_           3 CGLCERSFVEKSALSRHQR   21 (26)
T ss_dssp             CSSSCCBCSSHHHHHHHGG
T ss_pred             ccchHHHHHHHHHHHHHHH
Confidence            9999999999999999987

>d2glia5 g.37.1.1 (A:229-257) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=93.94  E-value=0.013  Score=36.10  Aligned_cols=22  Identities=32%  Similarity=0.732  Sum_probs=19.9

Q ss_pred             ccc-cCc--cCcccCChHHHHHHhh
Q 015460           11 KVW-CYY--CDREFDDEKILVQHQK   32 (406)
Q Consensus        11 Kp~-C~~--CgK~Fs~ks~Lk~H~R   32 (406)
                      |+| |.+  |+|++...+.|++|++
T Consensus         1 KPY~Ck~~gC~K~YtdPSSLRKH~k   25 (29)
T d2glia5           1 KPYVCKLPGCTKRYTDPSSLRKHVK   25 (29)
T ss_dssp             CCEECCSTTTCCEESSHHHHHHHHH
T ss_pred             CCeecccCCCCcccCCHHHHHHHHH
Confidence            577 987  9999999999999986

>d1bboa2 g.37.1.1 (A:29-57) Enhancer binding protein {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Enhancer binding protein
species: Human (Homo sapiens) [TaxId: 9606]

Probab=93.85  E-value=0.014  Score=35.55  Aligned_cols=21  Identities=33%  Similarity=0.776  Sum_probs=19.7

Q ss_pred             cc-cCccCcccCChHHHHHHhh
Q 015460           12 VW-CYYCDREFDDEKILVQHQK   32 (406)
Q Consensus        12 p~-C~~CgK~Fs~ks~Lk~H~R   32 (406)
                      +| |.+|+-.|..+.+|..|++
T Consensus         1 py~C~~CnF~FKTKGNLTKHmk   22 (29)
T d1bboa2           1 PYHCTYCNFSFKTKGNLTKHMK   22 (29)
T ss_dssp             CEECSSSSCEESSHHHHHHHHH
T ss_pred             CcccceeeeeEeeccchhHhhh
Confidence            46 9999999999999999998

>d2drpa2 g.37.1.1 (A:140-165) Tramtrack protein (two zinc-finger peptide) {Drosophila melanogaster [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Tramtrack protein (two zinc-finger peptide)
species: Drosophila melanogaster [TaxId: 7227]

Probab=93.62  E-value=0.013  Score=34.47  Aligned_cols=24  Identities=29%  Similarity=0.733  Sum_probs=18.2

Q ss_pred             cccccccCccCCchhhHhhhhhhc
Q 015460           36 FKCHVCHKKLSTAGGMAIHVLQVH   59 (406)
Q Consensus        36 fkC~~CgksFss~s~LkrH~rthH   59 (406)
                      |.|..|-|.|++++++..|.+..|
T Consensus         2 ypcp~cfkeftrkdnm~ahvkiih   25 (26)
T d2drpa2           2 YPCPFCFKEFTRKDNMTAHVKIIH   25 (26)
T ss_dssp             EECTTTCCEESCHHHHHHHHHHHT
T ss_pred             cCCchhhHHhccccCceEEEEEec
Confidence            567888888888888888876654

>d2j7ja2 g.37.1.1 (A:29-57) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=93.55  E-value=0.018  Score=34.92  Aligned_cols=21  Identities=33%  Similarity=0.686  Sum_probs=18.3

Q ss_pred             cc-cCc--cCcccCChHHHHHHhh
Q 015460           12 VW-CYY--CDREFDDEKILVQHQK   32 (406)
Q Consensus        12 p~-C~~--CgK~Fs~ks~Lk~H~R   32 (406)
                      +| |.+  |+|.|+..+.|++|.+
T Consensus         3 py~c~hegcdk~fs~ps~lkrhek   26 (29)
T d2j7ja2           3 PYECPHEGCDKRFSLPSRLKRHEK   26 (29)
T ss_dssp             CEECCSTTCCCEESSHHHHHHHHH
T ss_pred             CccCCccCccccccCHHHHhhhhh
Confidence            56 865  9999999999999964

>d2adra2 g.37.1.1 (A:131-161) ADR1 {Synthetic, based on Saccharomyces cerevisiae sequence}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ADR1
species: Synthetic, based on Saccharomyces cerevisiae sequence

Probab=93.29  E-value=0.018  Score=35.75  Aligned_cols=21  Identities=29%  Similarity=0.865  Sum_probs=19.1

Q ss_pred             cc-cCccCcccCChHHHHHHhh
Q 015460           12 VW-CYYCDREFDDEKILVQHQK   32 (406)
Q Consensus        12 p~-C~~CgK~Fs~ks~Lk~H~R   32 (406)
                      +| |.+|++.|+++..|.+|+.
T Consensus         1 Pf~C~~C~R~FaRrDLlLRH~q   22 (31)
T d2adra2           1 PYPCGLCNRAFTRRDLLIRHAQ   22 (31)
T ss_dssp             SEECTTTCCEESSHHHHHHHHT
T ss_pred             CcccccccchhhHHHHHHHHHH
Confidence            45 9999999999999999975

>d1x5wa1 g.37.1.1 (A:8-35) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=92.83  E-value=0.027  Score=33.86  Aligned_cols=26  Identities=23%  Similarity=0.293  Sum_probs=21.2

Q ss_pred             ccccccccCccCCchhhHhhhhhhcc
Q 015460           35 HFKCHVCHKKLSTAGGMAIHVLQVHK   60 (406)
Q Consensus        35 PfkC~~CgksFss~s~LkrH~rthHg   60 (406)
                      |-||..|..+...+..|+.|.|.|..
T Consensus         2 pekc~ecsyscsskaalrvh~rihc~   27 (28)
T d1x5wa1           2 PEKCSECSYSCSSKAALRIHERIHCT   27 (28)
T ss_dssp             SEECSSSSCEESSHHHHHHHHGGGCC
T ss_pred             CccCcccccccCcHHHHHHhhccccC
Confidence            56888888888889999999877753

>d2eppa1 g.37.1.1 (A:286-338) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=91.79  E-value=0.034  Score=38.10  Aligned_cols=25  Identities=24%  Similarity=0.408  Sum_probs=18.5

Q ss_pred             ccccccccCccCCchhhHhhhhhhc
Q 015460           35 HFKCHVCHKKLSTAGGMAIHVLQVH   59 (406)
Q Consensus        35 PfkC~~CgksFss~s~LkrH~rthH   59 (406)
                      -|.|..|+|.|.....|+.|..+|.
T Consensus         6 l~pCG~CgK~Ftd~~rLr~HEAQHG   30 (53)
T d2eppa1           6 ILPCGLCGKVFTDANRLRQHEAQHG   30 (53)
T ss_dssp             CCCCTTTCCCCSCHHHHHHHHHHHT
T ss_pred             eeeccccccccCCHHHHhHhHHhcC
Confidence            4678888888888888888865553

>d2dmda1 g.37.1.1 (A:34-61) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=91.61  E-value=0.045  Score=32.79  Aligned_cols=22  Identities=32%  Similarity=0.582  Sum_probs=20.3

Q ss_pred             ccc-cCccCcccCChHHHHHHhh
Q 015460           11 KVW-CYYCDREFDDEKILVQHQK   32 (406)
Q Consensus        11 Kp~-C~~CgK~Fs~ks~Lk~H~R   32 (406)
                      |++ |.+|+..-.+.+.|+.|+|
T Consensus         2 kp~kck~cdyaaadsssl~kh~r   24 (28)
T d2dmda1           2 KPYKCKTCDYAAADSSSLNKHLR   24 (28)
T ss_dssp             CSEECSSSCCEESSHHHHHHHHH
T ss_pred             CCcccccccchhcchhhHhhhhh
Confidence            577 9999999999999999987

>d1zr9a1 g.37.1.4 (A:28-94) Zinc finger protein 593, ZNF593 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: HkH motif-containing C2H2 finger
domain: Zinc finger protein 593, ZNF593
species: Human (Homo sapiens) [TaxId: 9606]

Probab=91.59  E-value=0.023  Score=41.93  Aligned_cols=23  Identities=30%  Similarity=0.460  Sum_probs=17.9

Q ss_pred             ccccCccCcccCChHHHHHHhhc
Q 015460           11 KVWCYYCDREFDDEKILVQHQKA   33 (406)
Q Consensus        11 Kp~C~~CgK~Fs~ks~Lk~H~RE   33 (406)
                      .+||..|+|.|.+...|..|++.
T Consensus        15 qfYCv~C~K~F~se~~l~~H~ks   37 (67)
T d1zr9a1          15 LHRCLACARYFIDSTNLKTHFRS   37 (67)
T ss_dssp             CSEETTTTEECSSHHHHHHHTTC
T ss_pred             EEecccccCccCCHHHHHHHHcc
Confidence            45688888888888888888763

>d2dlqa4 g.37.1.1 (A:8-34) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=91.39  E-value=0.056  Score=32.02  Aligned_cols=19  Identities=26%  Similarity=0.604  Sum_probs=18.1

Q ss_pred             cCccCcccCChHHHHHHhh
Q 015460           14 CYYCDREFDDEKILVQHQK   32 (406)
Q Consensus        14 C~~CgK~Fs~ks~Lk~H~R   32 (406)
                      |..|.|.|..+..|+.|-|
T Consensus         3 cp~c~k~f~skyylkvhnr   21 (27)
T d2dlqa4           3 CPTCHKKFLSKYYLKVHNR   21 (27)
T ss_dssp             CTTTCCCCSSHHHHHHHHH
T ss_pred             CcchHHHHHHhHhhhhccc
Confidence            9999999999999999976

>d1njqa_ g.37.1.3 (A:) SUPERMAN zinc finger domain {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Plant C2H2 finger (QALGGH zinc finger)
domain: SUPERMAN zinc finger domain
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=91.13  E-value=0.053  Score=35.32  Aligned_cols=22  Identities=32%  Similarity=0.821  Sum_probs=19.8

Q ss_pred             ccc-cCccCcccCChHHHHHHhh
Q 015460           11 KVW-CYYCDREFDDEKILVQHQK   32 (406)
Q Consensus        11 Kp~-C~~CgK~Fs~ks~Lk~H~R   32 (406)
                      +.| |.+|+|.|..-..|--|++
T Consensus         4 r~~~C~~C~k~F~s~qALGGH~~   26 (37)
T d1njqa_           4 RSYTCSFCKREFRSAQALGGHMN   26 (37)
T ss_dssp             SSEECTTTCCEESSHHHHHHHHH
T ss_pred             CccCCCCCCCccCCcccccchHh
Confidence            345 9999999999999999987

>d1bboa1 g.37.1.1 (A:1-28) Enhancer binding protein {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Enhancer binding protein
species: Human (Homo sapiens) [TaxId: 9606]

Probab=91.06  E-value=0.058  Score=32.62  Aligned_cols=26  Identities=23%  Similarity=0.328  Sum_probs=23.3

Q ss_pred             cceeecCCCCCCHhHHHHHhhhccCC
Q 015460           76 TDIEIYGMQGIPPDVLAAHYGEEEEV  101 (406)
Q Consensus        76 ~~c~iCG~~fi~~~~L~~H~k~he~~  101 (406)
                      |.|..||..-...+.|++|++.|++.
T Consensus         2 YvC~~Cg~~C~KPSvL~KHIRsHT~~   27 (28)
T d1bboa1           2 YICEECGIRAKKPSMLKKHIRTHTDV   27 (28)
T ss_dssp             CBCTTTCCBCSSHHHHHHHHHHTSSC
T ss_pred             ccccccCcccCCHHHHHHHHHHhcCC
Confidence            57889999999999999999999863

>d2eppa1 g.37.1.1 (A:286-338) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=89.91  E-value=0.23  Score=33.86  Aligned_cols=26  Identities=12%  Similarity=0.012  Sum_probs=23.4

Q ss_pred             ccceeecCCCCCCHhHHHHHhhhccC
Q 015460           75 STDIEIYGMQGIPPDVLAAHYGEEEE  100 (406)
Q Consensus        75 s~~c~iCG~~fi~~~~L~~H~k~he~  100 (406)
                      -+.|.+||+.|.....|+.|+..|-.
T Consensus         6 l~pCG~CgK~Ftd~~rLr~HEAQHG~   31 (53)
T d2eppa1           6 ILPCGLCGKVFTDANRLRQHEAQHGV   31 (53)
T ss_dssp             CCCCTTTCCCCSCHHHHHHHHHHHTT
T ss_pred             eeeccccccccCCHHHHhHhHHhcCc
Confidence            46799999999999999999998876

>d2ct1a1 g.37.1.1 (A:44-71) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=89.14  E-value=0.095  Score=31.32  Aligned_cols=19  Identities=26%  Similarity=0.431  Sum_probs=11.2

Q ss_pred             cCccCcccCChHHHHHHhh
Q 015460           14 CYYCDREFDDEKILVQHQK   32 (406)
Q Consensus        14 C~~CgK~Fs~ks~Lk~H~R   32 (406)
                      |.+|+-...++++|+.|+|
T Consensus         5 cphc~tiiarksdlrvhlr   23 (28)
T d2ct1a1           5 CPHCDTVIARKSDLGVHLR   23 (28)
T ss_dssp             CSSSSCEESSHHHHHHHHH
T ss_pred             CCcchhheeehhhhhHHhh
Confidence            6666666666666665554

>d2glia2 g.37.1.1 (A:135-167) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=89.11  E-value=0.091  Score=33.32  Aligned_cols=20  Identities=10%  Similarity=0.140  Sum_probs=16.3

Q ss_pred             cCccCCchhhHhhhhhhccC
Q 015460           42 HKKLSTAGGMAIHVLQVHKE   61 (406)
Q Consensus        42 gksFss~s~LkrH~rthHge   61 (406)
                      ++.|..+..|..|+|.|+||
T Consensus        14 ~~pf~a~YkLv~H~R~HTgE   33 (33)
T d2glia2          14 LRPFKAQYMLVVHMRRHTGE   33 (33)
T ss_dssp             TCCCSSHHHHHHHTHHHHCC
T ss_pred             CCcchhHHHHHHHHhhcCCC
Confidence            34688889999999988875

>d2glia4 g.37.1.1 (A:198-228) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=88.78  E-value=0.05  Score=33.71  Aligned_cols=21  Identities=29%  Similarity=0.649  Sum_probs=19.1

Q ss_pred             ccc-cCc--cCcccCChHHHHHHh
Q 015460           11 KVW-CYY--CDREFDDEKILVQHQ   31 (406)
Q Consensus        11 Kp~-C~~--CgK~Fs~ks~Lk~H~   31 (406)
                      |+| |++  |.|.|+..++...|+
T Consensus         1 kPY~C~~~gC~KafsNsSDraKHq   24 (31)
T d2glia4           1 KPYMCEHEGCSKAFSNASDRAKHQ   24 (31)
T ss_dssp             CCEECCSTTCCCEESSSSTTHHHH
T ss_pred             CCccccCCChhhhhcchhhhhhhc
Confidence            578 988  999999999999997

>d2drpa2 g.37.1.1 (A:140-165) Tramtrack protein (two zinc-finger peptide) {Drosophila melanogaster [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Tramtrack protein (two zinc-finger peptide)
species: Drosophila melanogaster [TaxId: 7227]

Probab=88.34  E-value=0.11  Score=30.32  Aligned_cols=20  Identities=30%  Similarity=0.780  Sum_probs=18.5

Q ss_pred             c-cCccCcccCChHHHHHHhh
Q 015460           13 W-CYYCDREFDDEKILVQHQK   32 (406)
Q Consensus        13 ~-C~~CgK~Fs~ks~Lk~H~R   32 (406)
                      | |.+|-|.|.++.++..|.+
T Consensus         2 ypcp~cfkeftrkdnm~ahvk   22 (26)
T d2drpa2           2 YPCPFCFKEFTRKDNMTAHVK   22 (26)
T ss_dssp             EECTTTCCEESCHHHHHHHHH
T ss_pred             cCCchhhHHhccccCceEEEE
Confidence            5 9999999999999999975

>d1x6ha1 g.37.1.1 (A:44-80) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=88.17  E-value=0.1  Score=33.02  Aligned_cols=20  Identities=20%  Similarity=0.619  Sum_probs=18.3

Q ss_pred             ccCccCcccCChHHHHHHhh
Q 015460           13 WCYYCDREFDDEKILVQHQK   32 (406)
Q Consensus        13 ~C~~CgK~Fs~ks~Lk~H~R   32 (406)
                      .|..|||.|.++..+.+|..
T Consensus         6 vcskcgktftrrntm~rha~   25 (37)
T d1x6ha1           6 VCSKCGKTFTRRNTMARHAD   25 (37)
T ss_dssp             ECSSSCCEESCHHHHHHHHH
T ss_pred             eecccccchhcchHHHHHhh
Confidence            39999999999999999964

>d2dlqa2 g.37.1.1 (A:35-62) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=87.41  E-value=0.17  Score=30.13  Aligned_cols=19  Identities=21%  Similarity=0.567  Sum_probs=17.7

Q ss_pred             cCccCcccCChHHHHHHhh
Q 015460           14 CYYCDREFDDEKILVQHQK   32 (406)
Q Consensus        14 C~~CgK~Fs~ks~Lk~H~R   32 (406)
                      |..|||.+-++.+|..|..
T Consensus         4 c~kcgkcyfrkenllehea   22 (28)
T d2dlqa2           4 CPKCGKCYFRKENLLEHEA   22 (28)
T ss_dssp             CTTTCCBCSSHHHHHHHHH
T ss_pred             cccchhhhhhHhHHHHHHH
Confidence            9999999999999999964

>d2dlqa3 g.37.1.1 (A:63-92) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=86.44  E-value=0.19  Score=30.35  Aligned_cols=23  Identities=26%  Similarity=0.527  Sum_probs=20.2

Q ss_pred             Cccc-cCccCcccCChHHHHHHhh
Q 015460           10 SKVW-CYYCDREFDDEKILVQHQK   32 (406)
Q Consensus        10 EKp~-C~~CgK~Fs~ks~Lk~H~R   32 (406)
                      |..+ |..|...|.++-.|+.|+-
T Consensus         2 eqvftcs~cqe~f~rrmelr~hmv   25 (30)
T d2dlqa3           2 EQVFTCSVCQETFRRRMELRLHMV   25 (30)
T ss_dssp             CCCEECSSSCCEESSHHHHHHHHH
T ss_pred             cceEEeHHHHHHHHHHHhheeeee
Confidence            4566 9999999999999999974

>d2ctda2 g.37.1.1 (A:61-90) Zinc finger protein 512, ZNF512 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 512, ZNF512
species: Human (Homo sapiens) [TaxId: 9606]

Probab=86.18  E-value=0.21  Score=30.21  Aligned_cols=26  Identities=42%  Similarity=0.860  Sum_probs=20.1

Q ss_pred             ccccccccCccCCchhhHhhhhhhcc
Q 015460           35 HFKCHVCHKKLSTAGGMAIHVLQVHK   60 (406)
Q Consensus        35 PfkC~~CgksFss~s~LkrH~rthHg   60 (406)
                      -|.|..|||..++...++.|...-|.
T Consensus         2 ~ftc~hcgkqlks~~gmkyhvmadhn   27 (30)
T d2ctda2           2 MFTCHHCGKQLRSLAGMKYHVMANHN   27 (30)
T ss_dssp             CCCCSSSCCCCSSHHHHHHHHHHHTC
T ss_pred             ceechhHHHHHhhccCceEEEeeccc
Confidence            37888888888888888888765543

>d1bhia_ g.37.1.1 (A:) Transactivation domain of cre-bp1/atf-2 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transactivation domain of cre-bp1/atf-2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=86.16  E-value=0.19  Score=32.55  Aligned_cols=24  Identities=29%  Similarity=0.652  Sum_probs=21.0

Q ss_pred             CCccc-cC--ccCcccCChHHHHHHhh
Q 015460            9 SSKVW-CY--YCDREFDDEKILVQHQK   32 (406)
Q Consensus         9 gEKp~-C~--~CgK~Fs~ks~Lk~H~R   32 (406)
                      .+|++ |.  -|+.+|....+|..|.+
T Consensus         3 ddkPF~C~~pGC~q~F~neDhL~vHk~   29 (38)
T d1bhia_           3 DDKPFLCTAPGCGQRFTNEDHLAVHKH   29 (38)
T ss_dssp             TCCCEECCCTTTCCEESSHHHHHHHHH
T ss_pred             CCCceecCCCCccccccchHHHHHhhh
Confidence            47899 95  59999999999999965

>d2j7ja1 g.37.1.1 (A:1-28) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=86.08  E-value=0.12  Score=30.63  Aligned_cols=23  Identities=22%  Similarity=0.651  Sum_probs=15.1

Q ss_pred             ccccc--ccCccCCchhhHhhhhhh
Q 015460           36 FKCHV--CHKKLSTAGGMAIHVLQV   58 (406)
Q Consensus        36 fkC~~--CgksFss~s~LkrH~rth   58 (406)
                      |.|..  |+|.|.....|+.|+-+|
T Consensus         2 yvchfe~c~kafkkhnqlkvhqf~h   26 (28)
T d2j7ja1           2 YVCHFENCGKAFKKHNQLKVHQFSH   26 (28)
T ss_dssp             EECCSTTCCCEESSHHHHHHHHHHH
T ss_pred             eEEEecCchHHHhhccceEEEeecc
Confidence            45544  777777777777776555

>d1tf3a3 g.37.1.1 (A:71-101) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=86.01  E-value=0.18  Score=30.59  Aligned_cols=27  Identities=30%  Similarity=0.675  Sum_probs=20.7

Q ss_pred             ccccccc--ccCccCCchhhHhhhhhhcc
Q 015460           34 KHFKCHV--CHKKLSTAGGMAIHVLQVHK   60 (406)
Q Consensus        34 KPfkC~~--CgksFss~s~LkrH~rthHg   60 (406)
                      |-|+|+.  |+-+|+++.+++.|-.+.|.
T Consensus         1 knf~cdsd~cdl~fttkanmkkhfnrfhn   29 (31)
T d1tf3a3           1 KNFTCDSDGCDLRFTTKANMKKHFNRFHN   29 (31)
T ss_dssp             CCEECSSSSCCCEESSHHHHHHHHHHHTT
T ss_pred             CCccccCCCcceEEeehHHHHHHHhhhcc
Confidence            4577864  88999999999998765553

>d2ct1a1 g.37.1.1 (A:44-71) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=85.99  E-value=0.15  Score=30.39  Aligned_cols=25  Identities=20%  Similarity=0.650  Sum_probs=22.0

Q ss_pred             ccccccccCccCCchhhHhhhhhhc
Q 015460           35 HFKCHVCHKKLSTAGGMAIHVLQVH   59 (406)
Q Consensus        35 PfkC~~CgksFss~s~LkrH~rthH   59 (406)
                      .|.|..|+..-.++++|+.|+|.-|
T Consensus         2 k~qcphc~tiiarksdlrvhlrnlh   26 (28)
T d2ct1a1           2 KFHCPHCDTVIARKSDLGVHLRKQH   26 (28)
T ss_dssp             SEECSSSSCEESSHHHHHHHHHHTS
T ss_pred             CccCCcchhheeehhhhhHHhhhcc
Confidence            4789999999999999999987654

>d2dmda3 g.37.1.1 (A:62-90) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=85.37  E-value=0.24  Score=29.75  Aligned_cols=23  Identities=17%  Similarity=0.434  Sum_probs=20.7

Q ss_pred             Cccc-cCccCcccCChHHHHHHhh
Q 015460           10 SKVW-CYYCDREFDDEKILVQHQK   32 (406)
Q Consensus        10 EKp~-C~~CgK~Fs~ks~Lk~H~R   32 (406)
                      |++| |+.|...-...+.|..|.|
T Consensus         1 erpfkcqlcsy~srnssqltvhlr   24 (29)
T d2dmda3           1 ERPFKCQICPYASRNSSQLTVHLR   24 (29)
T ss_dssp             CCCEECSSSSCEESSHHHHHHHHT
T ss_pred             CCcceeeecccccCCchheEEeee
Confidence            5677 9999999999999999976

>d1tf3a2 g.37.1.1 (A:41-70) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=83.14  E-value=0.24  Score=29.92  Aligned_cols=21  Identities=29%  Similarity=0.676  Sum_probs=17.9

Q ss_pred             ccc-cCc--cCcccCChHHHHHHh
Q 015460           11 KVW-CYY--CDREFDDEKILVQHQ   31 (406)
Q Consensus        11 Kp~-C~~--CgK~Fs~ks~Lk~H~   31 (406)
                      |++ |.+  |.|.|....+|.+|.
T Consensus         1 ~pfpc~~egc~kgf~tlhhltrhs   24 (30)
T d1tf3a2           1 KPFPCKEEGCEKGFTSLHHLTRHS   24 (30)
T ss_dssp             CSEECCCSSCCCEESSTTHHHHHH
T ss_pred             CCcCcccccccccchhhhhhhhhh
Confidence            356 865  999999999999995

>d2drpa1 g.37.1.1 (A:103-139) Tramtrack protein (two zinc-finger peptide) {Drosophila melanogaster [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Tramtrack protein (two zinc-finger peptide)
species: Drosophila melanogaster [TaxId: 7227]

Probab=82.49  E-value=0.27  Score=31.10  Aligned_cols=29  Identities=21%  Similarity=0.599  Sum_probs=22.4

Q ss_pred             ccccccccccCccCCchhhHhhhhhhccC
Q 015460           33 AKHFKCHVCHKKLSTAGGMAIHVLQVHKE   61 (406)
Q Consensus        33 EKPfkC~~CgksFss~s~LkrH~rthHge   61 (406)
                      +.-|.|.+|.+.++.-+++.+|-.+-|+.
T Consensus         6 ~~~yRC~~C~r~YTHISNFCRHyvtSHk~   34 (37)
T d2drpa1           6 EHTYRCKVCSRVYTHISNFCRHYVTSHKR   34 (37)
T ss_dssp             TTEEECTTTCCEESSHHHHHHHHHHHSSS
T ss_pred             CcEEEeehhhHHHHHHHHHHHHHHhhccc
Confidence            34688888888888888888887666543

>d2dlka1 g.37.1.1 (A:8-37) Zinc finger protein 692, ZNF692 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 692, ZNF692
species: Human (Homo sapiens) [TaxId: 9606]

Probab=80.87  E-value=0.39  Score=28.92  Aligned_cols=16  Identities=38%  Similarity=0.796  Sum_probs=10.5

Q ss_pred             cCcccCChHHHHHHhh
Q 015460           17 CDREFDDEKILVQHQK   32 (406)
Q Consensus        17 CgK~Fs~ks~Lk~H~R   32 (406)
                      |||.|+.+..|..|.+
T Consensus         8 c~kifsnrqylnhh~k   23 (30)
T d2dlka1           8 CGRIFSNRQYLNHHKK   23 (30)
T ss_dssp             TCCEESSHHHHHHHHH
T ss_pred             chhhhccHHHHHhHHH
Confidence            6777776666666654

>d1x5wa2 g.37.1.1 (A:36-64) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=80.57  E-value=0.44  Score=28.75  Aligned_cols=21  Identities=29%  Similarity=0.634  Sum_probs=18.9

Q ss_pred             cc-cCccCcccCChHHHHHHhh
Q 015460           12 VW-CYYCDREFDDEKILVQHQK   32 (406)
Q Consensus        12 p~-C~~CgK~Fs~ks~Lk~H~R   32 (406)
                      ++ |.+|.-.-.+.++|..|++
T Consensus         2 PFkC~~CsFDtkq~SnL~kH~k   23 (29)
T d1x5wa2           2 PFKCNYCSFDTKQPSNLSKHMK   23 (29)
T ss_dssp             SEECSSSSCEESSHHHHHHHHH
T ss_pred             CcccceecccccCcchHHHHHH
Confidence            55 9999988899999999986