Citrus Sinensis ID: 015484
Local Sequence Feature Prediction
| Prediction and Method | Result |
|---|
|
|
Function Prediction
Annotation transfered from Closely Related SWISS-PROT Entries 
| Annotation | Function Description | Confidence Level | Reference Protein |
| WD-40 repeat-containing protein MSI3 | Core histone-binding subunit that may target chromatin assembly factors, chromatin remodeling factors and histone deacetylases to their histone substrates in a manner that is regulated by nucleosomal DNA. | confident | O22469 |
| Histone-binding protein RBBP4 | Core histone-binding subunit that may target chromatin assembly factors, chromatin remodeling factors and histone deacetylases to their histone substrates in a manner that is regulated by nucleosomal DNA. Component of several complexes which regulate chromatin metabolism. These include the chromatin assembly factor 1 (CAF-1) complex, which is required for chromatin assembly following DNA replication and DNA repair; the core histone deacetylase (HDAC) complex, which promotes histone deacetylation and consequent transcriptional repression; the nucleosome remodeling and histone deacetylase complex (the NuRD complex), which promotes transcriptional repression by histone deacetylation and nucleosome remodeling; the PRC2/EED-EZH2 complex, which promotes repression of homeotic genes during development; and the NURF (nucleosome remodeling factor) complex. | probable | Q09028 |
| Histone-binding protein RBBP4 | Core histone-binding subunit that may target chromatin assembly factors, chromatin remodeling factors and histone deacetylases to their histone substrates in a manner that is regulated by nucleosomal DNA. | probable | Q9W7I5 |
Prediction of Enzyme Commission Number
No EC number assigned to the protein, probably not an enzyme!
Spatial Structural Prediction
Structural Models Based on Templates
|
Template: 1NR0, chain A Confidence level:very confident Coverage over the Query: 111-394 View the alignment between query and template View the model in PyMOL |
|
Template: 2PM9, chain A Confidence level:very confident Coverage over the Query: 39-50,62-87,105-334,349-395 View the alignment between query and template View the model in PyMOL |
|
Template: 4A11, chain B Confidence level:very confident Coverage over the Query: 16-49,62-92,104-334 View the alignment between query and template View the model in PyMOL |
|
Template: 2XYI, chain A Confidence level:very confident Coverage over the Query: 7-86,105-396 View the alignment between query and template View the model in PyMOL |