Citrus Sinensis ID: 015499

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-----
Protein Sequence
MTVSSNELSLLGPIQMATTGTIVPAEVDSDEPKQMGQPTAGIQASHSDHKGGGPSMPSDDGYNWRKYGQKHVKGSEFPRSYYKCTHPNCEVKKLFERSHDGQITEIIYKGTHDHPKPQLSRRYSAGNMMSIQEERPDKVSSLTCRDGSMYGQMSHAMETNGTPDLSPVANDDSVEPDVDDDDQYSKRRKMDALVADVTPVVKPIREPRVVVQTLSEVDILDDGYRWRKYGQKVVRGNPNPRSYYKCTNAGCPVRKHVERASHDPKAVITTYEGKHNHDVPTARTSSHDAAGPSAGNGPCRIISEEGEAISLDLGVGISSATENRSNEQPQALHSELAHSHPHASSSSYKIIQANAVTAYSGVVNGGMNQYGSRGNPTEGRGVDFPPLNHSSYPYPQNIGRILTGP
Secondary Structure (PSIPRED)
ccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccEEEcccccEEEEEEccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHccccccccccccccccccccEEEEEccccccccccccccccccccccccccccccEEccccccccccEEEEEccccccEEEEEEEcccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Secondary Structure Prediction (SSPRO)
cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHcccEEEccccccccEEEccccccccEEEEEEcccccEEEEEEEccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHccccccccccccccccccccEEEEEEccccccccccccHEHcccEEEccccccccEEEcccccccccEEEEEccccccEEEEEEcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHcccccccc
Coil and Loop (DISEMBL)
mtvssnelsllgpiqmattgtivpaevdsdepkqmgqptagiqashsdhkgggpsmpsddgynwrkygqkhvkgsefprsyykcthpncevkklfershdgqiTEIIYkgthdhpkpqlsrrysagnmmsiqeerpdkvssltcrdgsmygqmshametngtpdlspvanddsvepdvddddqyskRRKMDALVadvtpvvkpireprvvvqtlsevdilddgyrwrkygqkvvrgnpnprsyykctnagcpvrkhverashdpkAVITTyegkhnhdvptartsshdaagpsagngpcriiseeGEAISLDLgvgissatenrsneqpqALHSElahshphassssyKIIQANAVTAYSGVvnggmnqygsrgnptegrgvdfpplnhssypypqnigriltgp
Flexible Loop (DISEMBL)
mtvssnelsllgpiqmATTGTIVPAEVDSDEPKQMGQPTAGIqashsdhkgggpsmpSDDGYNWRKYGQKHVKGSEFPRSYYKCTHPNCEVKKLFERSHDGQITEIiykgthdhpkpQLSRRYSAGNMMSIqeerpdkvsslTCRDGSMYGQMSHAMETNGTPDLSPVANDDSVEPDVDDddqyskrrkmdalvadvtpvvkpireprvvvqtlsevdilddgyrwrkygqkvvrgnpnprsyykCTNAGCPVRKHVERASHDPKAVITTYEGKHNHDVPTartsshdaagpsAGNGPCRIISEEGEAISLDLGVGISSATENRSNEQPQALHSELAHSHPHASSSSYKIIQANAVTAYSGVVNGGMNQYGSRGNPTEGRGVDFPPlnhssypypqnigriltgp
Low Complexity Region (SEG)
MTVSSNELSLLGPIQMATTGTIVPAEVDSDEPKQMGQPTAGIQASHSDHKGGGPSMPSDDGYNWRKYGQKHVKGSEFPRSYYKCTHPNCEVKKLFERSHDGQITEIIYKGTHDHPKPQLSRRYSAGNMMSIQEERPDKVSSLTCRDGSMYGQMSHAMETNGTPDLSPVANddsvepdvddddQYSKRRKMDALVADVTPVVKPIREPRVVVQTLSEVDILDDGYRWRKYGQKVVRGNPNPRSYYKCTNAGCPVRKHVERASHDPKAVITTYEGKHNHDVPTARTSSHDAAGPSAGNGPCRIISEEGEAISLDLGVGISSATENRSNEQPQalhselahshphassssYKIIQANAVTAYSGVVNGGMNQYGSRGNPTEGRGVDFPPLNHSSYPYPQNIGRILTGP
Disordered region (IsUnstruct)
**************************************************************NWRKYGQKHVKGSEFPRSYYKCTHPNCEVKKLFERSHDGQITEIIYKG*********************************************************************************ALVADVTPVVKPIREPRVVVQTLSEVDILDDGYRWRKYGQKVVRGNPNPRSYYKCTNAGCPVRKHV**********I*******************************************************************************YKIIQANAVTAYSGVVNGG***************************************
Disordered Region (DISOPRED)
************************************************************GYNWRKYGQ******EFPRSYYKCTHPNCEV**************IIYKGTHDHPKPQLSRRYSAGNMMSIQEERPDKVSSLTCRDGSMYGQMSHAMETNGTPDLSPVANDDSVEPDVDDDD******************************TLSEVDILDDGYRWRKYGQKVVRGNPNPRSYYKCTNAGCPVRKHVERASHDPKAVITTYEGKHNH*************************************************************************************************************************GRI****
Disordered Region (DISEMBL)
********SLLGPIQMATTGTIVPAEVDS***************************PSDDGYNWRKYGQKHVKGSEFPRSYYKCTHPNCEVKKLFERSHDGQITEIIYKGTHDHPKPQLSRRYSAGNMMSI**********LTCRDGSMYGQMSHAMETNGTPDLSPVANDDSVEPDVDDDDQYSKRRKMDALVADVTPVVKPIREPRVVVQTLSEVDILDDGYRWRKYGQKVVRGNPNPRSYYKCTNAGCPVRKHVERASHDPKAVITTYEGKHNH*****************GNGPCRIISEEGEAISLDLGVGISSATE************************SYKIIQANAVTAYSGVVNGGMNQYGSRGNPTEGRGVDFPPLNHSSYPYPQNIGRILTGP
Disordered Region (DISPRO)
********************************************************PSDDGYNWRKYGQKHVKGSEFPRSYYKCTHPNCEVKKLFERSHDGQITEIIYKGTHD********************************************************************************************EPRVVVQTLSEVDILDDGYRWRKYGQKVVRGNPNPRSYYKCTNAGCPVRKHVERASHDPKAVITTYEGKH****************************************************************************************************************************RILT**
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MTVSSNELSLLGPIQMATTGTIVPAEVDSDEPKQMGQPTAGIQASHSDHKGGGPSMPSDDGYNWRKYGQKHVKGSEFPRSYYKCTHPNCEVKKLFERSHDGQITEIIYKGTHDHPKPQLSRRYSAGNMMSIQEERPDKVSSLTCRDGSMYGQMSHAMETNGTPDLSPVANDDSVEPDVDDDDQYSKRRKMDALVADVTPVVKPIREPRVVVQTLSEVDILDDGYRWRKYGQKVVRGNPNPRSYYKCTNAGCPVRKHVERASHDPKAVITTYEGKHNHDVPTARTSSHDAAGPSAGNGPCRIISEEGEAISLDLGVGISSATENRSNEQPQALHSELAHSHPHASSSSYKIIQANAVTAYSGVVNGGMNQYGSRGNPTEGRGVDFPPLNHSSYPYPQNIGRILTGP
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	405	2.2.26 [Sep-21-2011]
Q93WV0	557	Probable WRKY transcripti	yes	no	0.943	0.685	0.574	1e-123
Q9ZQ70	513	Probable WRKY transcripti	no	no	0.543	0.428	0.546	9e-69
Q9FG77	687	Probable WRKY transcripti	no	no	0.575	0.339	0.501	5e-68
O65590	568	Probable WRKY transcripti	no	no	0.6	0.427	0.512	2e-66
Q8S8P5	519	Probable WRKY transcripti	no	no	0.562	0.439	0.556	1e-65
Q9XI90	514	Probable WRKY transcripti	no	no	0.553	0.435	0.528	4e-65
Q93WU7	423	Probable WRKY transcripti	no	no	0.496	0.475	0.566	1e-60
Q9C5T3	309	Probable WRKY transcripti	no	no	0.444	0.582	0.524	8e-59
O22921	393	Probable WRKY transcripti	no	no	0.511	0.526	0.473	2e-55
Q9SI37	487	WRKY transcription factor	no	no	0.681	0.566	0.398	6e-54

>sp|Q93WV0|WRK20_ARATH Probable WRKY transcription factor 20 OS=Arabidopsis thaliana GN=WRKY20 PE=2 SV=1

 Score =  442 bits (1138), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 238/414 (57%), Positives = 291/414 (70%), Gaps = 32/414 (7%)

Query: 4   SSNELSL-LGPIQMATTGTIVPAEVDSDEPKQMGQPTAGIQASHSDHKGGGPSMPSDDGY 62
           SS+ELS    P QM  T + +PA  D +E          IQ S +D +G  PS+ +DDGY
Sbjct: 164 SSSELSRPTPPCQMTPTSSDIPAGSDQEE---------SIQTSQNDSRGSTPSILADDGY 214

Query: 63  NWRKYGQKHVKGSEFPRSYYKCTHPNCEVKKLFERSHDGQITEIIYKGTHDHPKPQLSRR 122
           NWRKYGQKHVKGSEFPRSYYKCTHPNCEVKKLFERSHDGQIT+IIYKGTHDHPKPQ  RR
Sbjct: 215 NWRKYGQKHVKGSEFPRSYYKCTHPNCEVKKLFERSHDGQITDIIYKGTHDHPKPQPGRR 274

Query: 123 YSAGNMMSIQEERPDKVSSLTCRD--GSMYGQMSHAMETNGTPDLSPV-ANDDSVEP--- 176
            S G  M+ QEER DK  S T RD  GS    +S+  E  G P++ P+ A+DD  E    
Sbjct: 275 NSGG--MAAQEERLDKYPSSTGRDEKGSGVYNLSNPNEQTGNPEVPPISASDDGGEAAAS 332

Query: 177 -----DVDDDDQYSKRRKMDALVADVTPVVKPIREPRVVVQTLSEVDILDDGYRWRKYGQ 231
                + DDDD +SKRR+M+  + ++TP+VKPIREPRVVVQTLSEVDILDDGYRWRKYGQ
Sbjct: 333 NRNKDEPDDDDPFSKRRRMEGAM-EITPLVKPIREPRVVVQTLSEVDILDDGYRWRKYGQ 391

Query: 232 KVVRGNPNPRSYYKCTNAGCPVRKHVERASHDPKAVITTYEGKHNHDVPTARTSSHDAAG 291
           KVVRGNPNPRSYYKCT  GCPVRKHVERASHDPKAVITTYEGKH+HDVPT+++SS+    
Sbjct: 392 KVVRGNPNPRSYYKCTAHGCPVRKHVERASHDPKAVITTYEGKHDHDVPTSKSSSNHEIQ 451

Query: 292 PSAGNGPCRIISEEGEAISLDLGVGISSATENRSNEQPQALHSELAHSHPHASSSSYKII 351
           P       R   +E + ISL+LGVGISS   N ++ + Q  + +L +   H +  +++ +
Sbjct: 452 P-------RFRPDETDTISLNLGVGISSDGPNHASNEHQHQNQQLVN-QTHPNGVNFRFV 503

Query: 352 QANAVTAYSGVVNGGMNQYGSRGNPTEGRGVDFPPLNHSSYPYPQNIGRILTGP 405
            A+ +++Y   +N GMNQYG R    E +  D   LN+SSYPYP N+GR+ +GP
Sbjct: 504 HASPMSSYYASLNSGMNQYGQRETKNETQNGDISSLNNSSYPYPPNMGRVQSGP 557

Transcription factor. Interacts specifically with the W box (5'-(T)TGAC[CT]-3'), a frequently occurring elicitor-responsive cis-acting element.
Arabidopsis thaliana (taxid: 3702)

>sp|Q9ZQ70|WRKY3_ARATH Probable WRKY transcription factor 3 OS=Arabidopsis thaliana GN=WRKY3 PE=2 SV=1

 Score =  261 bits (666), Expect = 9e-69,   Method: Compositional matrix adjust.
 Identities = 134/245 (54%), Positives = 163/245 (66%), Gaps = 25/245 (10%)

Query: 57  PSDDGYNWRKYGQKHVKGSEFPRSYYKCTHPNCEVKKLFERSHDGQITEIIYKGTHDHPK 116
           P+DDGYNWRKYGQK VKGS+FPRSYYKCTHP C VKK  ERS DGQ+TEIIYKG H+H  
Sbjct: 248 PADDGYNWRKYGQKQVKGSDFPRSYYKCTHPACPVKKKVERSLDGQVTEIIYKGQHNHEL 307

Query: 117 PQ-------------LSRRYSAGNMMSIQEERPDKVSSLTCRDGSMYGQMSHAMETNGTP 163
           PQ             ++ ++   N    + +R  + S +T  +     QMS A       
Sbjct: 308 PQKRGNNNGSCKSSDIANQFQTSNSSLNKSKRDQETSQVTTTE-----QMSEAS------ 356

Query: 164 DLSPVANDDSVEPDVDDDDQYSKRRKMDALVAD-VTPVVKPIREPRVVVQTLSEVDILDD 222
           D   V N ++   +  +D+   KRR  +  V++ V    + + EPR++VQT SEVD+LDD
Sbjct: 357 DSEEVGNAETSVGERHEDEPDPKRRNTEVRVSEPVASSHRTVTEPRIIVQTTSEVDLLDD 416

Query: 223 GYRWRKYGQKVVRGNPNPRSYYKCTNAGCPVRKHVERASHDPKAVITTYEGKHNHDVPTA 282
           GYRWRKYGQKVV+GNP PRSYYKCT   C VRKHVERA+ DPKAV+TTYEGKHNHDVP A
Sbjct: 417 GYRWRKYGQKVVKGNPYPRSYYKCTTPDCGVRKHVERAATDPKAVVTTYEGKHNHDVPAA 476

Query: 283 RTSSH 287
           RTSSH
Sbjct: 477 RTSSH 481

Transcription factor. Interacts specifically with the W box (5'-(T)TGAC[CT]-3'), a frequently occurring elicitor-responsive cis-acting element.

Arabidopsis thaliana (taxid: 3702)

>sp|Q9FG77|WRKY2_ARATH Probable WRKY transcription factor 2 OS=Arabidopsis thaliana GN=WRKY2 PE=2 SV=1

 Score =  258 bits (659), Expect = 5e-68,   Method: Compositional matrix adjust.
 Identities = 145/289 (50%), Positives = 177/289 (61%), Gaps = 56/289 (19%)

Query: 48  DHKGGGPSMPSDDGYNWRKYGQKHVKGSEFPRSYYKCTHPNCEVKKLFERSHDGQITEII 107
           D   GG   P++DGYNWRKYGQK VKGSE+PRSYYKCT+PNC+VKK  ERS +G ITEII
Sbjct: 264 DSMAGG--APAEDGYNWRKYGQKLVKGSEYPRSYYKCTNPNCQVKKKVERSREGHITEII 321

Query: 108 YKGTHDHPKPQLSRRYS-----AGNMMSIQEERPDKVSSLTC--------------RDGS 148
           YKG H+H KP  +RR          +   Q++R    + ++C               +GS
Sbjct: 322 YKGAHNHLKPPPNRRSGMQVDGTEQVEQQQQQRDSAATWVSCNNTQQQGGSNENNVEEGS 381

Query: 149 M---YGQMSHAMET-------NGTPDLSPVANDDSVEPDVDDDDQ--------------- 183
               YG  S +++        +G P +  V    +   D D+DD+               
Sbjct: 382 TRFEYGNQSGSIQAQTGGQYESGDP-VVVVDASSTFSNDEDEDDRGTHGSVSLGYDGGGG 440

Query: 184 ---------YSKRRKMDALVADVTPVVKPIREPRVVVQTLSEVDILDDGYRWRKYGQKVV 234
                     SKRRK++A  A+++   + IREPRVVVQT S+VDILDDGYRWRKYGQKVV
Sbjct: 441 GGGGEGDESESKRRKLEAFAAEMSGSTRAIREPRVVVQTTSDVDILDDGYRWRKYGQKVV 500

Query: 235 RGNPNPRSYYKCTNAGCPVRKHVERASHDPKAVITTYEGKHNHDVPTAR 283
           +GNPNPRSYYKCT  GC VRKHVERASHD K+VITTYEGKHNHDVP AR
Sbjct: 501 KGNPNPRSYYKCTAPGCTVRKHVERASHDLKSVITTYEGKHNHDVPAAR 549

Transcription factor. Interacts specifically with the W box (5'-(T)TGAC[CT]-3'), a frequently occurring elicitor-responsive cis-acting element.

Arabidopsis thaliana (taxid: 3702)

>sp|O65590|WRK34_ARATH Probable WRKY transcription factor 34 OS=Arabidopsis thaliana GN=WRKY34 PE=2 SV=1

 Score =  253 bits (645), Expect = 2e-66,   Method: Compositional matrix adjust.
 Identities = 143/279 (51%), Positives = 172/279 (61%), Gaps = 36/279 (12%)

Query: 51  GGGPSM----PSDDGYNWRKYGQKHVKGSEFPRSYYKCTHPNCEVKKLFERSHDGQITEI 106
           G G SM    P+DDGYNWRKYGQK VKGSE+PRSYYKCTHPNCE KK  ERS +G I EI
Sbjct: 166 GLGDSMACCAPADDGYNWRKYGQKLVKGSEYPRSYYKCTHPNCEAKKKVERSREGHIIEI 225

Query: 107 IYKGTHDHPKPQLSRRYSAGNMMSIQEERPD--KVSSLTCRDGSM-----------YGQM 153
           IY G H H KP  +RR   G+  + Q+ + D  +       + ++           YG  
Sbjct: 226 IYTGDHIHSKPPPNRRSGIGSSGTGQDMQIDATEYEGFAGTNENIEWTSPVSAELEYGSH 285

Query: 154 SHAMET-NGTPDLS-PVANDDSVEPDVDDDDQY-----------------SKRRKMDALV 194
           S +M+  NGT       A  D++  D ++DD+                  SKRRK++A  
Sbjct: 286 SGSMQVQNGTHQFGYGDAAADALYRDENEDDRTSHMSVSLTYDGEVEESESKRRKLEAYA 345

Query: 195 ADVTPVVKPIREPRVVVQTLSEVDILDDGYRWRKYGQKVVRGNPNPRSYYKCTNAGCPVR 254
            + +   +  REPRVVVQT S++DILDDGYRWRKYGQKVV+GNPNPRSYYKCT  GC V 
Sbjct: 346 TETSGSTRASREPRVVVQTTSDIDILDDGYRWRKYGQKVVKGNPNPRSYYKCTANGCTVT 405

Query: 255 KHVERASHDPKAVITTYEGKHNHDVPTARTSSHDAAGPS 293
           KHVERAS D K+V+TTY GKH H VP AR SSH  AG S
Sbjct: 406 KHVERASDDFKSVLTTYIGKHTHVVPAARNSSHVGAGSS 444

Transcription factor. Interacts specifically with the W box (5'-(T)TGAC[CT]-3'), a frequently occurring elicitor-responsive cis-acting element.

Arabidopsis thaliana (taxid: 3702)

>sp|Q8S8P5|WRK33_ARATH Probable WRKY transcription factor 33 OS=Arabidopsis thaliana GN=WRKY33 PE=1 SV=2

 Score =  251 bits (640), Expect = 1e-65,   Method: Compositional matrix adjust.
 Identities = 137/246 (55%), Positives = 160/246 (65%), Gaps = 18/246 (7%)

Query: 59  DDGYNWRKYGQKHVKGSEFPRSYYKCTHPNCEVKKLFERSHDGQITEIIYKGTHDHPKPQ 118
           +DGYNWRKYGQK VKGSE PRSYYKCT PNC  KK  ERS +GQITEI+YKG+H+HPKPQ
Sbjct: 184 EDGYNWRKYGQKQVKGSENPRSYYKCTFPNCPTKKKVERSLEGQITEIVYKGSHNHPKPQ 243

Query: 119 LSRR--------YSAGNMMSIQEERPDKVSSLTCRDGSMYGQMSHAMETNGTPDLSPVAN 170
            +RR        +SA    S+   R    S     + S +   S  M+         V +
Sbjct: 244 STRRSSSSSSTFHSAVYNASLDHNR-QASSDQPNSNNSFHQSDSFGMQQEDNTTSDSVGD 302

Query: 171 DDS------VEPDVDD--DDQYSKRRKMD-ALVADVTPVVKPIREPRVVVQTLSEVDILD 221
           D+       V  D +D   +  +KR K D           K +REPR+VVQT S++DILD
Sbjct: 303 DEFEQGSSIVSRDEEDCGSEPEAKRWKGDNETNGGNGGGSKTVREPRIVVQTTSDIDILD 362

Query: 222 DGYRWRKYGQKVVRGNPNPRSYYKCTNAGCPVRKHVERASHDPKAVITTYEGKHNHDVPT 281
           DGYRWRKYGQKVV+GNPNPRSYYKCT  GCPVRKHVERASHD +AVITTYEGKHNHDVP 
Sbjct: 363 DGYRWRKYGQKVVKGNPNPRSYYKCTTIGCPVRKHVERASHDMRAVITTYEGKHNHDVPA 422

Query: 282 ARTSSH 287
           AR S +
Sbjct: 423 ARGSGY 428

Transcription factor. Interacts specifically with the W box (5'-(T)TGAC[CT]-3'), a frequently occurring elicitor-responsive cis-acting element.

Arabidopsis thaliana (taxid: 3702)

>sp|Q9XI90|WRKY4_ARATH Probable WRKY transcription factor 4 OS=Arabidopsis thaliana GN=WRKY4 PE=1 SV=2

 Score =  248 bits (634), Expect = 4e-65,   Method: Compositional matrix adjust.
 Identities = 128/242 (52%), Positives = 158/242 (65%), Gaps = 18/242 (7%)

Query: 57  PSDDGYNWRKYGQKHVKGSEFPRSYYKCTHPNCEVKKLFERSHDGQITEIIYKGTHDHPK 116
           P+DDGYNWRKYGQK VKGSEFPRSYYKCT+P C VKK  ERS DGQ+TEIIYKG H+H  
Sbjct: 227 PADDGYNWRKYGQKQVKGSEFPRSYYKCTNPGCPVKKKVERSLDGQVTEIIYKGQHNHEP 286

Query: 117 PQLSRRYSAGNMMSIQEERPDKVSSLTCRDGSMYG----------QMSHAMETNGTPDLS 166
           PQ ++R +  N  +I     +     +    S +           Q     +   T  LS
Sbjct: 287 PQNTKRGNKDNTANINGSSINNNRGSSELGASQFQTNSSNKTKREQHEAVSQATTTEHLS 346

Query: 167 PVANDDSV---EPDVDDDDQYS---KRRKMDALVADVTPVV--KPIREPRVVVQTLSEVD 218
             ++ + V   E DV + D+     KRR  +  +++  P    + + EPR++VQT SEVD
Sbjct: 347 EASDGEEVGNGETDVREKDENEPDPKRRSTEVRISEPAPAASHRTVTEPRIIVQTTSEVD 406

Query: 219 ILDDGYRWRKYGQKVVRGNPNPRSYYKCTNAGCPVRKHVERASHDPKAVITTYEGKHNHD 278
           +LDDGYRWRKYGQKVV+GNP PRSYYKCT  GC VRKHVERA+ DPKAV+TTYEGKHNHD
Sbjct: 407 LLDDGYRWRKYGQKVVKGNPYPRSYYKCTTPGCGVRKHVERAATDPKAVVTTYEGKHNHD 466

Query: 279 VP 280
           +P
Sbjct: 467 LP 468

Transcription factor. Interacts specifically with the W box (5'-(T)TGAC[CT]-3'), a frequently occurring elicitor-responsive cis-acting element.

Arabidopsis thaliana (taxid: 3702)

>sp|Q93WU7|WRK58_ARATH Probable WRKY transcription factor 58 OS=Arabidopsis thaliana GN=WRKY58 PE=2 SV=2

 Score =  234 bits (597), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 127/224 (56%), Positives = 151/224 (67%), Gaps = 23/224 (10%)

Query: 57  PSDDGYNWRKYGQKHVKGSEFPRSYYKCTHPNCEVKKLFERSHDGQITEIIYKGTHDHPK 116
           P+DDGYNWRKYGQK +KG E+PRSYYKCTH NC VKK  ERS DGQIT+IIYKG HDH +
Sbjct: 165 PADDGYNWRKYGQKPIKGCEYPRSYYKCTHVNCPVKKKVERSSDGQITQIIYKGQHDHER 224

Query: 117 PQLSRRYSAGNMMSIQEERPDKVSSLTCRDGSMYGQMSHAMETNGTPDLSPVANDDSVEP 176
           PQ +RR   G                  RD +  G     ME++         +DD  + 
Sbjct: 225 PQ-NRRGGGG------------------RDSTEVGGAGQMMESSDDSGYRKDHDDDDDDD 265

Query: 177 DVDDDDQYSKRRKMDALVADVTPVVKPIREPRVVVQTLSEVDILDDGYRWRKYGQKVVRG 236
           + D+D   SK R++D     V+   + + EP+++VQT SEVD+LDDGYRWRKYGQKVV+G
Sbjct: 266 EDDEDLPASKIRRIDG----VSTTHRTVTEPKIIVQTKSEVDLLDDGYRWRKYGQKVVKG 321

Query: 237 NPNPRSYYKCTNAGCPVRKHVERASHDPKAVITTYEGKHNHDVP 280
           NP+PRSYYKCT   C VRKHVERAS D KAVITTYEGKHNHDVP
Sbjct: 322 NPHPRSYYKCTTPNCTVRKHVERASTDAKAVITTYEGKHNHDVP 365

Transcription factor. Interacts specifically with the W box (5'-(T)TGAC[CT]-3'), a frequently occurring elicitor-responsive cis-acting element.

Arabidopsis thaliana (taxid: 3702)

>sp|Q9C5T3|WRK26_ARATH Probable WRKY transcription factor 26 OS=Arabidopsis thaliana GN=WRKY26 PE=2 SV=2

 Score =  228 bits (580), Expect = 8e-59,   Method: Compositional matrix adjust.
 Identities = 119/227 (52%), Positives = 144/227 (63%), Gaps = 47/227 (20%)

Query: 58  SDDGYNWRKYGQKHVKGSEFPRSYYKCTHPNCEVKKLFERSH-DGQITEIIYKGTHDHPK 116
           SDDGYNWRKYGQK VKGSE PRSY+KCT+PNC  KK  E S   GQ+ EI+YKG+H+HPK
Sbjct: 116 SDDGYNWRKYGQKQVKGSENPRSYFKCTYPNCLTKKKVETSLVKGQMIEIVYKGSHNHPK 175

Query: 117 PQLSRRYSAGNMMSIQEERPDKVSSLTCRDGSMYGQMSHAMETNGTPDLSPVANDDSVEP 176
           PQ ++R S+  + +                        H   +NG               
Sbjct: 176 PQSTKRSSSTAIAA------------------------HQNSSNGDGK------------ 199

Query: 177 DVDDDDQYSKRRKMDALVADVTPVVKPIREPRVVVQTLSEVDILDDGYRWRKYGQKVVRG 236
           D+ +D+  +KR K +          + ++EPRVVVQT S++DILDDGYRWRKYGQKVV+G
Sbjct: 200 DIGEDETEAKRWKRE----------ENVKEPRVVVQTTSDIDILDDGYRWRKYGQKVVKG 249

Query: 237 NPNPRSYYKCTNAGCPVRKHVERASHDPKAVITTYEGKHNHDVPTAR 283
           NPNPRSYYKCT  GC VRKHVERA  DPK+VITTYEGKH H +PT R
Sbjct: 250 NPNPRSYYKCTFTGCFVRKHVERAFQDPKSVITTYEGKHKHQIPTPR 296

Transcription factor. Interacts specifically with the W box (5'-(T)TGAC[CT]-3'), a frequently occurring elicitor-responsive cis-acting element.

Arabidopsis thaliana (taxid: 3702)

>sp|O22921|WRK25_ARATH Probable WRKY transcription factor 25 OS=Arabidopsis thaliana GN=WRKY25 PE=1 SV=1

 Score =  216 bits (550), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 115/243 (47%), Positives = 150/243 (61%), Gaps = 36/243 (14%)

Query: 58  SDDGYNWRKYGQKHVKGSEFPRSYYKCTHPNCEVKKLFERSHDGQITEIIYKGTHDHPKP 117
           S+DGY WRKYGQK VK SE PRSY+KCT+P+C  KK+ E + DGQITEIIYKG H+HPKP
Sbjct: 165 SNDGYGWRKYGQKQVKKSENPRSYFKCTYPDCVSKKIVETASDGQITEIIYKGGHNHPKP 224

Query: 118 QLSRRYSAGNMMSIQEERPDKVSSLTCRDGSMYGQMSHAMETNGTPDLSPVANDDSVEPD 177
           + ++R S  ++       P  V+     + +      H    N            S+  D
Sbjct: 225 EFTKRPSQSSL-------PSSVNGRRLFNPASVVSEPHDQSENS-----------SISFD 266

Query: 178 VDDDDQYS-----------------KRRKMDALVADVT-PVVKPIREPRVVVQTLSEVDI 219
             D +Q S                 KR K +     ++  V K ++EPRVVVQT+S++D+
Sbjct: 267 YSDLEQKSFKSEYGEIDEEEEQPEMKRMKREGEDEGMSIEVSKGVKEPRVVVQTISDIDV 326

Query: 220 LDDGYRWRKYGQKVVRGNPNPRSYYKCTNAGCPVRKHVERASHDPKAVITTYEGKHNHDV 279
           L DG+RWRKYGQKVV+GN NPRSYYKCT  GC V+K VER++ D +AV+TTYEG+HNHD+
Sbjct: 327 LIDGFRWRKYGQKVVKGNTNPRSYYKCTFQGCGVKKQVERSAADERAVLTTYEGRHNHDI 386

Query: 280 PTA 282
           PTA
Sbjct: 387 PTA 389

Transcription factor. Interacts specifically with the W box (5'-(T)TGAC[CT]-3'), a frequently occurring elicitor-responsive cis-acting element.

Arabidopsis thaliana (taxid: 3702)

>sp|Q9SI37|WRKY1_ARATH WRKY transcription factor 1 OS=Arabidopsis thaliana GN=WRKY1 PE=1 SV=1

 Score =  211 bits (538), Expect = 6e-54,   Method: Compositional matrix adjust.
 Identities = 129/324 (39%), Positives = 179/324 (55%), Gaps = 48/324 (14%)

Query: 7   ELSLLGPIQMATTGTIVPAEVDSDEPKQMGQP----TAGIQASHSDHKGGGPSMPS---D 59
           EL  L P  +A+      +EVD   P     P    ++G  +  S  +G  P +     +
Sbjct: 57  ELEKLVPHTVASQ-----SEVDVASPVSEKAPKVSESSGALSLQSGSEGNSPFIREKVME 111

Query: 60  DGYNWRKYGQKHVKGSEFPRSYYKCTHPNCEVKKLFERSHDGQITEIIYKGTHDHPKP-- 117
           DGYNWRKYGQK VKG+EF RSYY+CTHPNC+ KK  ERS  GQ+ + +Y G HDHPKP  
Sbjct: 112 DGYNWRKYGQKLVKGNEFVRSYYRCTHPNCKAKKQLERSAGGQVVDTVYFGEHDHPKPLA 171

Query: 118 -----QLSRRYSAGNMMSIQEERPDKVSSL--TC-----------RDGSMYGQMSHAM-- 157
                   +R      +S  E+R D VS +   C             GS    +      
Sbjct: 172 GAVPINQDKRSDVFTAVSKGEQRIDIVSLIYKLCIVSYDIMFVEKTSGSSVQTLRQTEPP 231

Query: 158 ETNGTPDLSPVANDDSVEPDV-------------DDDDQYSKRRKMDALVADVTPVVKPI 204
           + +G   +S +   D V+ D+             D +   +KRRK    + +++PV +  
Sbjct: 232 KIHGGLHVSVIPPADDVKTDISQSSRITGDNTHKDYNSPTAKRRKKGGNI-ELSPVERST 290

Query: 205 REPRVVVQTLSEVDILDDGYRWRKYGQKVVRGNPNPRSYYKCTNAGCPVRKHVERASHDP 264
            + R+VV T +  DI++DGYRWRKYGQK V+G+P PRSYY+C++ GCPV+KHVER+SHD 
Sbjct: 291 NDSRIVVHTQTLFDIVNDGYRWRKYGQKSVKGSPYPRSYYRCSSPGCPVKKHVERSSHDT 350

Query: 265 KAVITTYEGKHNHDVPTARTSSHD 288
           K +ITTYEGKH+HD+P  R  +H+
Sbjct: 351 KLLITTYEGKHDHDMPPGRVVTHN 374

Transcription factor. Binds to a 5'-CGTTGACCGAG-3' consensus core sequence which contains a W box, a frequently occurring elicitor-responsive cis-acting element.

Arabidopsis thaliana (taxid: 3702)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	405
255576310	562	WRKY transcription factor, putative [Ric	0.995	0.717	0.751	1e-176
224056431	557	predicted protein [Populus trichocarpa]	0.987	0.718	0.718	1e-167
359494165	580	PREDICTED: probable WRKY transcription f	1.0	0.698	0.705	1e-162
297737535	552	unnamed protein product [Vitis vinifera]	1.0	0.733	0.705	1e-162
224114435	539	predicted protein [Populus trichocarpa]	0.992	0.745	0.698	1e-162
147818884	742	hypothetical protein VITISV_004662 [Viti	1.0	0.545	0.702	1e-161
356501612	588	PREDICTED: probable WRKY transcription f	0.985	0.678	0.662	1e-152
356569659	577	PREDICTED: probable WRKY transcription f	0.975	0.684	0.663	1e-151
356524334	577	PREDICTED: probable WRKY transcription f	0.975	0.684	0.651	1e-150
166203236	492	transcription factor [Glycine max]	0.985	0.810	0.649	1e-149

>gi|255576310|ref|XP_002529048.1| WRKY transcription factor, putative [Ricinus communis] gi|223531528|gb|EEF33359.1| WRKY transcription factor, putative [Ricinus communis]

 Score =  623 bits (1607), Expect = e-176,   Method: Compositional matrix adjust.
 Identities = 308/410 (75%), Positives = 341/410 (83%), Gaps = 7/410 (1%)

Query: 1   MTVSSNELSLLGPIQMATTGTIVPAEVDSDEPKQMGQPTAGIQASHSDHKGG-GPSMPSD 59
           M VSSNE SL  P  + ++GT  P EV+SDE  Q+G    G+QAS +DHKGG G SMPSD
Sbjct: 155 MAVSSNEFSLSAP--LPSSGTSAPGEVESDELNQIGVSNNGLQASQTDHKGGSGISMPSD 212

Query: 60  DGYNWRKYGQKHVKGSEFPRSYYKCTHPNCEVKKLFERSHDGQITEIIYKGTHDHPKPQL 119
           DGYNWRKYGQKHVKGSEFPRSYYKCTHPNCEVKKLFERSHDGQITEIIYKGTHDHPKPQ 
Sbjct: 213 DGYNWRKYGQKHVKGSEFPRSYYKCTHPNCEVKKLFERSHDGQITEIIYKGTHDHPKPQP 272

Query: 120 SRRYSAGNMMSIQEERPDKVSSLTCRDGSM---YGQMSHAMETNGTPDLSPV-ANDDSVE 175
           SRRYS+G ++S+QE+R DK+ SL  RD      YGQ+SH ++ NGTP+LSPV ANDDS+E
Sbjct: 273 SRRYSSGAVLSMQEDRSDKILSLPGRDDKTSIAYGQVSHTIDPNGTPELSPVTANDDSIE 332

Query: 176 PDVDDDDQYSKRRKMDALVADVTPVVKPIREPRVVVQTLSEVDILDDGYRWRKYGQKVVR 235
              DDDD +SKRRKMD    +VTPVVKPIREPRVVVQTLSEVDILDDGYRWRKYGQKVVR
Sbjct: 333 GAEDDDDPFSKRRKMDTGGFEVTPVVKPIREPRVVVQTLSEVDILDDGYRWRKYGQKVVR 392

Query: 236 GNPNPRSYYKCTNAGCPVRKHVERASHDPKAVITTYEGKHNHDVPTARTSSHDAAGPSAG 295
           GNPNPRSYYKCTNAGCPVRKHVERASHDPKAVITTYEGKHNHDVP ARTSSHD  GP+A 
Sbjct: 393 GNPNPRSYYKCTNAGCPVRKHVERASHDPKAVITTYEGKHNHDVPMARTSSHDTTGPTAV 452

Query: 296 NGPCRIISEEGEAISLDLGVGISSATENRSNEQPQALHSELAHSHPHASSSSYKIIQANA 355
           NG  RI SEE E ISLDLGVGISS T+NRSN+Q QALHSEL+ S   AS SS++I+    
Sbjct: 453 NGASRIRSEESETISLDLGVGISSTTDNRSNDQQQALHSELSQSQNQASGSSFRIVPRAT 512

Query: 356 VTAYSGVVNGGMNQYGSRGNPTEGRGVDFPPLNHSSYPYPQNIGRILTGP 405
           +  Y GV+NGGMNQYGSR NP EGR V+ PPL+HSSYPYPQN+GR+LTGP
Sbjct: 513 IAPYYGVLNGGMNQYGSRQNPNEGRSVEIPPLSHSSYPYPQNVGRLLTGP 562

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224056431|ref|XP_002298853.1| predicted protein [Populus trichocarpa] gi|222846111|gb|EEE83658.1| predicted protein [Populus trichocarpa]

 Score =  593 bits (1529), Expect = e-167,   Method: Compositional matrix adjust.
 Identities = 294/409 (71%), Positives = 332/409 (81%), Gaps = 9/409 (2%)

Query: 1   MTVSSNELSLLGPIQMATTGTIVPAEVDSDEPKQMGQPTAGIQASHSDHKGG-GPSMPSD 59
           M VS+NELSL   + M T+    PAEVDSDE  Q G  ++G+QAS SDH+ G  PSM SD
Sbjct: 154 MEVSTNELSLSASLHMVTSVASAPAEVDSDELNQTGLSSSGLQASQSDHRAGTAPSMSSD 213

Query: 60  DGYNWRKYGQKHVKGSEFPRSYYKCTHPNCEVKKLFERSHDGQITEIIYKGTHDHPKPQL 119
           DGYNWRKYGQKHVKGSEFPRSYYKCTHPNCEVKKLFERSHDGQITEIIYKGTHDHPKPQ 
Sbjct: 214 DGYNWRKYGQKHVKGSEFPRSYYKCTHPNCEVKKLFERSHDGQITEIIYKGTHDHPKPQP 273

Query: 120 SRRYSAGNMMSIQEERPDKVSSLTC---RDGSMYGQMSHAMETNGTPDLSPVANDDSVEP 176
           SRRY++G+++S+QE+R DK SSL     +    YGQ+ HA+E NG  +LS  ANDD+ E 
Sbjct: 274 SRRYASGSVLSMQEDRFDKSSSLPNQGDKSPGAYGQVPHAIEPNGALELSTGANDDTGEG 333

Query: 177 DVDDDDQYSKRRKMDALVADVTPVVKPIREPRVVVQTLSEVDILDDGYRWRKYGQKVVRG 236
             DDDD +SKRR++DA   DVTPVVKPIREPRVVVQTLSEVDILDDGYRWRKYGQKVVRG
Sbjct: 334 AEDDDDPFSKRRRLDAGGFDVTPVVKPIREPRVVVQTLSEVDILDDGYRWRKYGQKVVRG 393

Query: 237 NPNPRSYYKCTNAGCPVRKHVERASHDPKAVITTYEGKHNHDVPTARTSSHDAAGPSAGN 296
           NPNPRSYYKCTNAGCPVRKHVERASHDPKAVITTYEGKHNHDVPTART+SHD AGPSA N
Sbjct: 394 NPNPRSYYKCTNAGCPVRKHVERASHDPKAVITTYEGKHNHDVPTARTNSHDMAGPSAVN 453

Query: 297 GPCRIISEEGEAISLDLGVGISSATENRSNEQPQALHSELAHSHPHASSSSYKIIQANAV 356
           GP RI  +E E ISLDLGVGISS TEN+S++Q QALH+EL      AS SS++++ A  +
Sbjct: 454 GPSRIRPDENETISLDLGVGISSTTENQSSDQQQALHAELIKHENQASGSSFRVVHATPI 513

Query: 357 TAYSGVVNGGMNQYGSRGNPTEGRGVDFPPLNHSSYPYPQNIGRILTGP 405
           TAY GV+NGGMNQYGSR  P E R ++ PP     YPYPQN+GR+LTGP
Sbjct: 514 TAYYGVLNGGMNQYGSRQIPGESRSIEIPP-----YPYPQNMGRLLTGP 557

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|359494165|ref|XP_002274204.2| PREDICTED: probable WRKY transcription factor 20-like [Vitis vinifera]

 Score =  578 bits (1491), Expect = e-162,   Method: Compositional matrix adjust.
 Identities = 294/417 (70%), Positives = 328/417 (78%), Gaps = 12/417 (2%)

Query: 1   MTVSSNELSLLGPIQMATTGTIVPAEVDSDEPKQMGQPTAGIQASHSDHKGGGPSM---- 56
           M   SNELSL  P  M T+    PAEVDSDE  Q G P  G+QAS SD KG GPS     
Sbjct: 164 MMAPSNELSLCSPGHMVTSLESAPAEVDSDELNQQGHPNNGVQASQSDQKGIGPSAVVER 223

Query: 57  PSDDGYNWRKYGQKHVKGSEFPRSYYKCTHPNCEVKKLFERSHDGQITEIIYKGTHDHPK 116
            S+DGYNWRKYGQKHVKGSEFPRSYYKCTHPNCEVKKLFER+HDGQI EIIYKGTHDHPK
Sbjct: 224 SSEDGYNWRKYGQKHVKGSEFPRSYYKCTHPNCEVKKLFERAHDGQIVEIIYKGTHDHPK 283

Query: 117 PQLSRRYSAGNMMSIQEERPDKVSSLTCRDG---SMYGQMSHAMETNGTPDLSPVA-NDD 172
           PQ SRRY++G ++ +QEERPDKVSSL  RD    S+YGQM+H ++ NGTP+LSPVA NDD
Sbjct: 284 PQPSRRYASGAILPVQEERPDKVSSLIGRDDKSPSIYGQMAHNIDPNGTPELSPVAANDD 343

Query: 173 SVE----PDVDDDDQYSKRRKMDALVADVTPVVKPIREPRVVVQTLSEVDILDDGYRWRK 228
            VE     +VD+DD  SKRRKM+    DVTPVVKPIREPRVVVQTLSEVDILDDGYRWRK
Sbjct: 344 VVEGAILDEVDEDDPLSKRRKMEIGGIDVTPVVKPIREPRVVVQTLSEVDILDDGYRWRK 403

Query: 229 YGQKVVRGNPNPRSYYKCTNAGCPVRKHVERASHDPKAVITTYEGKHNHDVPTARTSSHD 288
           YGQKVVRGNPNPRSYYKCTNAGCPVRKHVERASHDPKAVITTYEGKHNHDVPTART+SHD
Sbjct: 404 YGQKVVRGNPNPRSYYKCTNAGCPVRKHVERASHDPKAVITTYEGKHNHDVPTARTNSHD 463

Query: 289 AAGPSAGNGPCRIISEEGEAISLDLGVGISSATENRSNEQPQALHSELAHSHPHASSSSY 348
           AAG  A NG   I SEE + ISLDLGVGI+SA+ENR N Q Q LH+EL  +    ++S++
Sbjct: 464 AAGQVALNGMPMIRSEENDTISLDLGVGINSASENRPNVQHQTLHAELVLTQTRTNNSNF 523

Query: 349 KIIQANAVTAYSGVVNGGMNQYGSRGNPTEGRGVDFPPLNHSSYPYPQNIGRILTGP 405
           + +QA  V+ Y GV+N GM+ YG R N  E R  + PPLNHSS P PQN+GRIL GP
Sbjct: 524 QAVQATPVSRYYGVLNNGMDLYGFRENLGESRSFETPPLNHSSNPCPQNMGRILMGP 580

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297737535|emb|CBI26736.3| unnamed protein product [Vitis vinifera]

 Score =  578 bits (1489), Expect = e-162,   Method: Compositional matrix adjust.
 Identities = 294/417 (70%), Positives = 328/417 (78%), Gaps = 12/417 (2%)

Query: 1   MTVSSNELSLLGPIQMATTGTIVPAEVDSDEPKQMGQPTAGIQASHSDHKGGGPSM---- 56
           M   SNELSL  P  M T+    PAEVDSDE  Q G P  G+QAS SD KG GPS     
Sbjct: 136 MMAPSNELSLCSPGHMVTSLESAPAEVDSDELNQQGHPNNGVQASQSDQKGIGPSAVVER 195

Query: 57  PSDDGYNWRKYGQKHVKGSEFPRSYYKCTHPNCEVKKLFERSHDGQITEIIYKGTHDHPK 116
            S+DGYNWRKYGQKHVKGSEFPRSYYKCTHPNCEVKKLFER+HDGQI EIIYKGTHDHPK
Sbjct: 196 SSEDGYNWRKYGQKHVKGSEFPRSYYKCTHPNCEVKKLFERAHDGQIVEIIYKGTHDHPK 255

Query: 117 PQLSRRYSAGNMMSIQEERPDKVSSLTCRDG---SMYGQMSHAMETNGTPDLSPVA-NDD 172
           PQ SRRY++G ++ +QEERPDKVSSL  RD    S+YGQM+H ++ NGTP+LSPVA NDD
Sbjct: 256 PQPSRRYASGAILPVQEERPDKVSSLIGRDDKSPSIYGQMAHNIDPNGTPELSPVAANDD 315

Query: 173 SVE----PDVDDDDQYSKRRKMDALVADVTPVVKPIREPRVVVQTLSEVDILDDGYRWRK 228
            VE     +VD+DD  SKRRKM+    DVTPVVKPIREPRVVVQTLSEVDILDDGYRWRK
Sbjct: 316 VVEGAILDEVDEDDPLSKRRKMEIGGIDVTPVVKPIREPRVVVQTLSEVDILDDGYRWRK 375

Query: 229 YGQKVVRGNPNPRSYYKCTNAGCPVRKHVERASHDPKAVITTYEGKHNHDVPTARTSSHD 288
           YGQKVVRGNPNPRSYYKCTNAGCPVRKHVERASHDPKAVITTYEGKHNHDVPTART+SHD
Sbjct: 376 YGQKVVRGNPNPRSYYKCTNAGCPVRKHVERASHDPKAVITTYEGKHNHDVPTARTNSHD 435

Query: 289 AAGPSAGNGPCRIISEEGEAISLDLGVGISSATENRSNEQPQALHSELAHSHPHASSSSY 348
           AAG  A NG   I SEE + ISLDLGVGI+SA+ENR N Q Q LH+EL  +    ++S++
Sbjct: 436 AAGQVALNGMPMIRSEENDTISLDLGVGINSASENRPNVQHQTLHAELVLTQTRTNNSNF 495

Query: 349 KIIQANAVTAYSGVVNGGMNQYGSRGNPTEGRGVDFPPLNHSSYPYPQNIGRILTGP 405
           + +QA  V+ Y GV+N GM+ YG R N  E R  + PPLNHSS P PQN+GRIL GP
Sbjct: 496 QAVQATPVSRYYGVLNNGMDLYGFRENLGESRSFETPPLNHSSNPCPQNMGRILMGP 552

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224114435|ref|XP_002316759.1| predicted protein [Populus trichocarpa] gi|222859824|gb|EEE97371.1| predicted protein [Populus trichocarpa]

 Score =  577 bits (1486), Expect = e-162,   Method: Compositional matrix adjust.
 Identities = 287/411 (69%), Positives = 332/411 (80%), Gaps = 9/411 (2%)

Query: 1   MTVSSNELSLLGPIQMATTGTIVPAEVDSDEPKQMGQPTAGIQASHSDHKGGGPSMPSDD 60
           M V +NEL+L  P+ M T+G+ VPAEVDSDE  QMG  ++G++AS S   G  P++ SDD
Sbjct: 132 MAVCTNELTLSTPLHMVTSGSSVPAEVDSDELNQMGLSSSGLRASQS---GSAPTVSSDD 188

Query: 61  GYNWRKYGQKHVKGSEFPRSYYKCTHPNCEVKKLFERSHDGQITEIIYKGTHDHPKPQLS 120
           GY WRKYGQKHVKGSEFPRSYYKCTHPNCEVKKLFE SHDGQITEIIYKGTHDHPKPQ S
Sbjct: 189 GYKWRKYGQKHVKGSEFPRSYYKCTHPNCEVKKLFECSHDGQITEIIYKGTHDHPKPQPS 248

Query: 121 RRYSAGNMMSIQEERPDKVSSLTCRDGS---MYGQMSHAMETNGTPDLSP-VANDDSVEP 176
           RRY++G+ + + EER DK SSL  +D      YGQ+SHA+E +G P+LSP   NDD+ E 
Sbjct: 249 RRYASGSGLFMLEERFDKFSSLPSQDDKSPGAYGQVSHAIEPDGAPELSPGTTNDDTGEG 308

Query: 177 DVDDDDQYSKR-RKMDALVADVTPVVKPIREPRVVVQTLSEVDILDDGYRWRKYGQKVVR 235
             DD D +SKR R++DA   DVTPV+KPIREPRVVVQT SEVDILDDGYRWRKYGQKVVR
Sbjct: 309 AEDDKDPFSKRSRRLDAGGFDVTPVIKPIREPRVVVQTQSEVDILDDGYRWRKYGQKVVR 368

Query: 236 GNPNPRSYYKCTNAGCPVRKHVERASHDPKAVITTYEGKHNHDVPTARTSSHDAAGPSAG 295
           GNPNPRSYYKCTNAGCPVRKHVERASHDPKAVITTYEGKHNHDVPTART+SHD AGPSA 
Sbjct: 369 GNPNPRSYYKCTNAGCPVRKHVERASHDPKAVITTYEGKHNHDVPTARTNSHDTAGPSAV 428

Query: 296 NGPCRIISEEGEAISLDLGVGISSATENRSNEQPQALHSELAHSHPHASS-SSYKIIQAN 354
           NG  R   ++ E ISLDLGVGISS +EN S++Q QALH+EL      +SS SS++I+ A+
Sbjct: 429 NGTSRTRPDKNETISLDLGVGISSTSENLSSDQQQALHAELVRFENQSSSGSSFRIVHAS 488

Query: 355 AVTAYSGVVNGGMNQYGSRGNPTEGRGVDFPPLNHSSYPYPQNIGRILTGP 405
            + AY GV+NGGMNQYGSR  P+EGR ++ PPLN SSYPYPQN+G +LTGP
Sbjct: 489 PIAAYYGVLNGGMNQYGSRQIPSEGRSIEIPPLNRSSYPYPQNVGSLLTGP 539

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|147818884|emb|CAN78297.1| hypothetical protein VITISV_004662 [Vitis vinifera]

 Score =  575 bits (1482), Expect = e-161,   Method: Compositional matrix adjust.
 Identities = 293/417 (70%), Positives = 328/417 (78%), Gaps = 12/417 (2%)

Query: 1   MTVSSNELSLLGPIQMATTGTIVPAEVDSDEPKQMGQPTAGIQASHSDHKGGGPSM---- 56
           M   SNELSL  P  M T+    PAEVDSDE  Q G P  G+QAS SD KG GPS     
Sbjct: 326 MMAPSNELSLCSPGHMVTSLESAPAEVDSDELNQQGHPNNGVQASQSDQKGIGPSAVVER 385

Query: 57  PSDDGYNWRKYGQKHVKGSEFPRSYYKCTHPNCEVKKLFERSHDGQITEIIYKGTHDHPK 116
            S+DGYNWRKYGQKHVKGSEFPRSYYKCTHPNCEVKKLFER+HDGQI EIIYKGTHDHPK
Sbjct: 386 SSEDGYNWRKYGQKHVKGSEFPRSYYKCTHPNCEVKKLFERAHDGQIVEIIYKGTHDHPK 445

Query: 117 PQLSRRYSAGNMMSIQEERPDKVSSLTCRDG---SMYGQMSHAMETNGTPDLSPVA-NDD 172
           PQ SRRY++G ++ +QEERPDKVSSL  RD    S+YGQM+H ++ NGTP+LSPVA NDD
Sbjct: 446 PQPSRRYASGAILPVQEERPDKVSSLIGRDDKSPSIYGQMAHNIDPNGTPELSPVAANDD 505

Query: 173 SVE----PDVDDDDQYSKRRKMDALVADVTPVVKPIREPRVVVQTLSEVDILDDGYRWRK 228
            VE     +VD+DD  SKRRKM+    DVTPVVKPIREPRVVVQTLSEVDILDDGYRWRK
Sbjct: 506 VVEGAILDEVDEDDPLSKRRKMEIGGIDVTPVVKPIREPRVVVQTLSEVDILDDGYRWRK 565

Query: 229 YGQKVVRGNPNPRSYYKCTNAGCPVRKHVERASHDPKAVITTYEGKHNHDVPTARTSSHD 288
           YGQKVVRGNPNPRSYYKCTNAGCPVRKHVERASHDPKAVITTYEGKHNHDVPTART+SHD
Sbjct: 566 YGQKVVRGNPNPRSYYKCTNAGCPVRKHVERASHDPKAVITTYEGKHNHDVPTARTNSHD 625

Query: 289 AAGPSAGNGPCRIISEEGEAISLDLGVGISSATENRSNEQPQALHSELAHSHPHASSSSY 348
           AAG  A NG   I SEE + ISLDLGVGI+SA+ENR N Q Q LH+EL  +    ++S++
Sbjct: 626 AAGQVALNGMPMIRSEENDTISLDLGVGINSASENRPNVQHQTLHAELVLTQTRTNNSNF 685

Query: 349 KIIQANAVTAYSGVVNGGMNQYGSRGNPTEGRGVDFPPLNHSSYPYPQNIGRILTGP 405
           + +QA  V+ Y GV+N GM+ YG R N  E R  + PPLNHSS P PQ++GRIL GP
Sbjct: 686 QAVQATPVSRYYGVLNNGMDLYGFRENLGESRSFETPPLNHSSNPCPQSMGRILMGP 742

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356501612|ref|XP_003519618.1| PREDICTED: probable WRKY transcription factor 20-like [Glycine max]

 Score =  545 bits (1403), Expect = e-152,   Method: Compositional matrix adjust.
 Identities = 281/424 (66%), Positives = 317/424 (74%), Gaps = 25/424 (5%)

Query: 1   MTVSSNELSLLGPIQMATTGTIVPAEVDSDEPKQMGQPTAGIQASHSDHKGGGPSMP--- 57
           +TV SNELSL  P+QM ++    P +VD DE    G    G+QASH + +G G S+    
Sbjct: 171 ITVPSNELSLSSPVQMVSSSASAPVDVDLDEINHKGNTATGLQASHVEVRGSGLSVAAEK 230

Query: 58  -SDDGYNWRKYGQKHVKGSEFPRSYYKCTHPNCEVKKLFERSHDGQITEIIYKGTHDHPK 116
            SDDGYNWRKYGQK VKGSEFPRSYYKCTHPNCEVKKLFERSHDGQITEI+YKGTHDHPK
Sbjct: 231 TSDDGYNWRKYGQKLVKGSEFPRSYYKCTHPNCEVKKLFERSHDGQITEIVYKGTHDHPK 290

Query: 117 PQLSRRYSAGNMMSIQEERPDKVSSLTCRD---GSMYGQMSHAMETNGTPDLSPVA-NDD 172
           PQ S RYS G +M IQ ER DK +SL  RD    +MYGQ+SHA E N TP+ SPVA NDD
Sbjct: 291 PQSSCRYSTGTVMYIQGERSDK-ASLAGRDDKASTMYGQVSHAAEPNSTPESSPVATNDD 349

Query: 173 SVE----------PDVDDDDQYSKRRKMDALVADVTPVVKPIREPRVVVQTLSEVDILDD 222
            +E           +VDDDD +SKRRKM+    D+TPVVKPIREPRVVVQTLSEVDILDD
Sbjct: 350 GLEGAGFVSNRNNEEVDDDDPFSKRRKMELGNVDITPVVKPIREPRVVVQTLSEVDILDD 409

Query: 223 GYRWRKYGQKVVRGNPNPRSYYKCTNAGCPVRKHVERASHDPKAVITTYEGKHNHDVPTA 282
           GYRWRKYGQKVVRGNPNPRSYYKCTNAGCPVRKHVERASHDPKAVITTYEGKHNHDVP A
Sbjct: 410 GYRWRKYGQKVVRGNPNPRSYYKCTNAGCPVRKHVERASHDPKAVITTYEGKHNHDVPAA 469

Query: 283 RTSSHDAAGPSA-GNGPCRIISEEGEAISLDLGVGISSATENRSNEQPQALHSELAHSHP 341
           R SSHD A P+A   G  RI  EE + ISLDLG+GISSA E+RSN Q + LHSEL  +  
Sbjct: 470 RNSSHDMAVPAATAGGQTRIKLEESDTISLDLGMGISSAAEHRSNGQGKMLHSELGETQT 529

Query: 342 HASSSSYKIIQANAVTAYSGVVNGGMNQYGSRGNPTEGRGVDFPPLNHSSYPYPQNIGRI 401
           HAS+S++K +   +   Y GV+N   N YGSR N ++G     P LNHSSYP PQ++GRI
Sbjct: 530 HASNSNFKFVHTTSAPVYFGVLNNSSNPYGSRDNRSDG-----PSLNHSSYPCPQSMGRI 584

Query: 402 LTGP 405
           L GP
Sbjct: 585 LLGP 588

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356569659|ref|XP_003553015.1| PREDICTED: probable WRKY transcription factor 20-like [Glycine max]

 Score =  541 bits (1395), Expect = e-151,   Method: Compositional matrix adjust.
 Identities = 278/419 (66%), Positives = 310/419 (73%), Gaps = 24/419 (5%)

Query: 5   SNELSLLGPIQMATTGTIVPAEVDSDEPKQMGQPTAGIQASHSDHKGGGPSMP----SDD 60
           SNELSL  P+QM  +G     E D DE       T G+QAS  D++G G S+     SDD
Sbjct: 165 SNELSLSSPVQMDCSGGSARVEGDLDELNPRSNITTGLQASQVDNRGSGLSVAADRVSDD 224

Query: 61  GYNWRKYGQKHVKGSEFPRSYYKCTHPNCEVKKLFERSHDGQITEIIYKGTHDHPKPQLS 120
           GYNWRKYGQKHVKGSEFPRSYYKCTHPNCEVKKLFERSHDGQITEIIYKGTHDHPKPQ +
Sbjct: 225 GYNWRKYGQKHVKGSEFPRSYYKCTHPNCEVKKLFERSHDGQITEIIYKGTHDHPKPQPN 284

Query: 121 RRYSAGNMMSIQEERPDKVSSLTCRDGS---MYGQMSHAMETNGTPDLSPVANDDS---- 173
           RRYSAG +MS+QEER DKVS LT RDG+   M GQ SH  E +  P+LSPVA +D     
Sbjct: 285 RRYSAGTIMSVQEERSDKVS-LTSRDGNGSYMCGQGSHLAEPDSQPELSPVATNDGDLDG 343

Query: 174 -------VEPDVDDDDQYSKRRKMDALVADVTPVVKPIREPRVVVQTLSEVDILDDGYRW 226
                     +VDDDD +SKRRKMD  +AD+TPVVKPIREPRVVVQTLSEVDILDDGYRW
Sbjct: 344 LGVLSNRNNDEVDDDDPFSKRRKMDLGIADITPVVKPIREPRVVVQTLSEVDILDDGYRW 403

Query: 227 RKYGQKVVRGNPNPRSYYKCTNAGCPVRKHVERASHDPKAVITTYEGKHNHDVPTARTSS 286
           RKYGQKVVRGNPNPRSYYKCTN GCPVRKHVERASHDPKAVITTYEGKHNHDVPTAR S 
Sbjct: 404 RKYGQKVVRGNPNPRSYYKCTNTGCPVRKHVERASHDPKAVITTYEGKHNHDVPTARNSC 463

Query: 287 HDAAGPSAGNGPCRIISEEGEAISLDLGVGISSATENRSNEQPQALHSELAHSHPHASSS 346
           HD AGP++ +G  RI  EE + ISLDLG+GIS A EN  N Q + + SE   S  H S+S
Sbjct: 464 HDMAGPASASGQTRIRPEESDTISLDLGMGISPAAENTPNSQGRMMLSEFGDSQTHTSNS 523

Query: 347 SYKIIQANAVTAYSGVVNGGMNQYGSRGNPTEGRGVDFPPLNHSSYPYPQNIGRILTGP 405
           ++  +    V  Y GV+N   N YGSR NP++G     P LNHS+YP PQNIGRIL GP
Sbjct: 524 NFNFVHTTTVPGYFGVLNNNSNPYGSRENPSDG-----PSLNHSAYPCPQNIGRILMGP 577

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356524334|ref|XP_003530784.1| PREDICTED: probable WRKY transcription factor 20 [Glycine max]

 Score =  538 bits (1386), Expect = e-150,   Method: Compositional matrix adjust.
 Identities = 273/419 (65%), Positives = 310/419 (73%), Gaps = 24/419 (5%)

Query: 5   SNELSLLGPIQMATTGTIVPAEVDSDEPKQMGQPTAGIQASHSDHKGGGPSMP----SDD 60
           SNELSL  P+QM  +G     E D DE       T G+QAS  D++G G ++     SDD
Sbjct: 165 SNELSLSSPVQMDCSGASARVEGDLDELNPRSNITTGLQASQVDNRGSGLTVAAERVSDD 224

Query: 61  GYNWRKYGQKHVKGSEFPRSYYKCTHPNCEVKKLFERSHDGQITEIIYKGTHDHPKPQLS 120
           GYNWRKYGQKHVKGSEFPRSYYKCTHPNCEVKKLFERSHDGQITEIIYKGTHDHPKPQ +
Sbjct: 225 GYNWRKYGQKHVKGSEFPRSYYKCTHPNCEVKKLFERSHDGQITEIIYKGTHDHPKPQPN 284

Query: 121 RRYSAGNMMSIQEERPDKVSSLTCRD---GSMYGQMSHAMETNGTPDLSPVANDDS---- 173
           RRYSAG +MS+QE+R DK +SLT RD    +M GQ SH  E +G P+L PVA +D     
Sbjct: 285 RRYSAGTIMSVQEDRSDK-ASLTSRDDKGSNMCGQGSHLAEPDGKPELLPVATNDGDLDG 343

Query: 174 -------VEPDVDDDDQYSKRRKMDALVADVTPVVKPIREPRVVVQTLSEVDILDDGYRW 226
                     +VDDDD +SKRRKMD  +AD+TPVVKPIREPRVVVQTLSEVDILDDGYRW
Sbjct: 344 LGVLSNRNNDEVDDDDPFSKRRKMDVGIADITPVVKPIREPRVVVQTLSEVDILDDGYRW 403

Query: 227 RKYGQKVVRGNPNPRSYYKCTNAGCPVRKHVERASHDPKAVITTYEGKHNHDVPTARTSS 286
           RKYGQKVVRGNPNPRSYYKCTN GCPVRKHVERASHDPKAVITTYEGKHNHDVPTAR S 
Sbjct: 404 RKYGQKVVRGNPNPRSYYKCTNTGCPVRKHVERASHDPKAVITTYEGKHNHDVPTARNSC 463

Query: 287 HDAAGPSAGNGPCRIISEEGEAISLDLGVGISSATENRSNEQPQALHSELAHSHPHASSS 346
           HD AGP++ +G  R+  EE + ISLDLG+GIS A EN SN Q + + SE   S  H S+S
Sbjct: 464 HDMAGPASASGQTRVRPEESDTISLDLGMGISPAAENTSNSQGRMMLSEFGDSQIHTSNS 523

Query: 347 SYKIIQANAVTAYSGVVNGGMNQYGSRGNPTEGRGVDFPPLNHSSYPYPQNIGRILTGP 405
           ++K +       Y GV+N   N YGS+ NP++G     P LNHS+YP PQNIGRIL GP
Sbjct: 524 NFKFVHTTTAPGYFGVLNNNSNPYGSKENPSDG-----PSLNHSAYPCPQNIGRILMGP 577

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|166203236|gb|ABY84658.1| transcription factor [Glycine max]

 Score =  535 bits (1379), Expect = e-149,   Method: Compositional matrix adjust.
 Identities = 276/425 (64%), Positives = 314/425 (73%), Gaps = 26/425 (6%)

Query: 1   MTVSSNELSLLGPIQMATTGTIVPAEVDSDEPKQMGQPTAGIQASHSDHKGGGPSMP--- 57
           +TV SNELSL  P+QM ++    P +VD DE    G    G+QASH + +G G S+    
Sbjct: 74  ITVPSNELSLSSPVQMVSSSASAPVDVDLDEINHKGNTATGLQASHVEVRGSGLSVAAEK 133

Query: 58  -SDDGYNWRKYGQKHVKGSEFPRSYYKCTHPNCEVKKLFERSHDGQITEIIYKGTHDHPK 116
            SDDGYNWRKYGQK VKGSEFPRSYYKCTHPNCEVKKLFERSHDGQITEI+YKGTHDHPK
Sbjct: 134 TSDDGYNWRKYGQKLVKGSEFPRSYYKCTHPNCEVKKLFERSHDGQITEIVYKGTHDHPK 193

Query: 117 PQLSRRYSAGNMMSIQEERPDKVSSLTCRDG---SMYGQMSHAMETNGTPDLSPVA-NDD 172
           PQ S RYS G +MSIQ ER DK +S+  RD    +MYGQ+SHA E N TP+ SPVA NDD
Sbjct: 194 PQPSCRYSTGTVMSIQGERSDK-ASMAGRDDKATAMYGQVSHAAEPNSTPESSPVATNDD 252

Query: 173 SVE-----------PDVDDDDQYSKRRKMDALVADVTPVVKPIREPRVVVQTLSEVDILD 221
            +E            +VD+DD +SKRRKM+    D+TPVVKPIREPRVVVQTLSEVDILD
Sbjct: 253 GLEGVAGFVSNRTNEEVDNDDPFSKRRKMELGNVDITPVVKPIREPRVVVQTLSEVDILD 312

Query: 222 DGYRWRKYGQKVVRGNPNPRSYYKCTNAGCPVRKHVERASHDPKAVITTYEGKHNHDVPT 281
           DGYRWRKYGQKVVRGNPNPRSYYKCTNAGCPVRKHVERASHDPKAVITTYEGKHNHDVP 
Sbjct: 313 DGYRWRKYGQKVVRGNPNPRSYYKCTNAGCPVRKHVERASHDPKAVITTYEGKHNHDVPA 372

Query: 282 ARTSSHDAAGP-SAGNGPCRIISEEGEAISLDLGVGISSATENRSNEQPQALHSELAHSH 340
           AR SSHD A P +A  G  R   EE + ISLDLG+GISSA E+RSN Q + LHSE   + 
Sbjct: 373 ARNSSHDMAVPAAAAGGQTRTKLEESDTISLDLGMGISSAAEHRSNGQGKMLHSEFGDTQ 432

Query: 341 PHASSSSYKIIQANAVTAYSGVVNGGMNQYGSRGNPTEGRGVDFPPLNHSSYPYPQNIGR 400
            H SSS++K +   +   Y GV+N   N +GSR N ++G     P LN SSYP PQ++GR
Sbjct: 433 THTSSSNFKFVHTTSAPVYFGVLNNSSNPFGSRDNRSDG-----PSLNRSSYPCPQSMGR 487

Query: 401 ILTGP 405
           IL GP
Sbjct: 488 ILMGP 492

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	405
TAIR|locus:2133852	557	WRKY20 [Arabidopsis thaliana (	0.943	0.685	0.550	1.1e-110
TAIR|locus:2177596	687	WRKY2 "WRKY DNA-binding protei	0.276	0.163	0.761	1e-71
TAIR|locus:2014799	514	WRKY4 "WRKY DNA-binding protei	0.259	0.204	0.672	2e-67
TAIR|locus:2063835	513	WRKY3 "WRKY DNA-binding protei	0.629	0.497	0.530	1.2e-65
TAIR|locus:2131503	568	WRKY34 "WRKY DNA-binding prote	0.269	0.191	0.688	2e-65
TAIR|locus:2057212	519	WRKY33 "AT2G38470" [Arabidopsi	0.582	0.454	0.527	1.4e-62
TAIR|locus:2169354	309	WRKY26 "WRKY DNA-binding prote	0.197	0.258	0.8	1.6e-59
TAIR|locus:2045049	487	ZAP1 "zinc-dependent activator	0.254	0.211	0.557	8.8e-57
TAIR|locus:2060805	393	WRKY25 "WRKY DNA-binding prote	0.555	0.572	0.493	9.9e-55
TAIR|locus:2049852	429	TTG2 "TRANSPARENT TESTA GLABRA	0.219	0.207	0.577	6.6e-50

TAIR|locus:2133852 WRKY20 [Arabidopsis thaliana (taxid:3702)]

 Score = 1093 (389.8 bits), Expect = 1.1e-110, P = 1.1e-110
 Identities = 228/414 (55%), Positives = 275/414 (66%)

Query:     4 SSNELSL-LGPIQMATTGTIVPAEVDSDEPKQMGQPTAGIQASHSDHKGGGPSMPSDDGY 62
             SS+ELS    P QM  T + +PA  D +E          IQ S +D +G  PS+ +DDGY
Sbjct:   164 SSSELSRPTPPCQMTPTSSDIPAGSDQEE---------SIQTSQNDSRGSTPSILADDGY 214

Query:    63 NWRKYGQKHVKGSEFPRSYYKCTHPNCEVKKLFERSHDGQITEIIYKGTHDHPKPQLSRR 122
             NWRKYGQKHVKGSEFPRSYYKCTHPNCEVKKLFERSHDGQIT+IIYKGTHDHPKPQ  RR
Sbjct:   215 NWRKYGQKHVKGSEFPRSYYKCTHPNCEVKKLFERSHDGQITDIIYKGTHDHPKPQPGRR 274

Query:   123 YSAGNMMSIQEERPDKVSSLTCRD--GSMYGQMSHAMETNGTPDLSPVANXXXXXXXXXX 180
              S G  M+ QEER DK  S T RD  GS    +S+  E  G P++ P++           
Sbjct:   275 NSGG--MAAQEERLDKYPSSTGRDEKGSGVYNLSNPNEQTGNPEVPPISASDDGGEAAAS 332

Query:   181 XXQ---------YSKRRKMDALVADVTPVVKPIREPRVVVQTLSEVDILDDGYRWRKYGQ 231
                         +SKRR+M+  + ++TP+VKPIREPRVVVQTLSEVDILDDGYRWRKYGQ
Sbjct:   333 NRNKDEPDDDDPFSKRRRMEGAM-EITPLVKPIREPRVVVQTLSEVDILDDGYRWRKYGQ 391

Query:   232 KVVRGNPNPRSYYKCTNAGCPVRKHVERASHDPKAVITTYEGKHNHDVPTARTSSHDAAG 291
             KVVRGNPNPRSYYKCT  GCPVRKHVERASHDPKAVITTYEGKH+HDVPT+++SS+    
Sbjct:   392 KVVRGNPNPRSYYKCTAHGCPVRKHVERASHDPKAVITTYEGKHDHDVPTSKSSSNHEIQ 451

Query:   292 PSAGNGPCRIISEEGEAISLDLGVGISSATENRSNEQPQXXXXXXXXXXXXXXXXXYKII 351
             P       R   +E + ISL+LGVGISS   N ++ + Q                 ++ +
Sbjct:   452 P-------RFRPDETDTISLNLGVGISSDGPNHASNEHQHQNQQLVNQTHPNGVN-FRFV 503

Query:   352 QANAVTAYSGVVNGGMNQYGSRGNPTEGRGVDFPPLNHSSYPYPQNIGRILTGP 405
              A+ +++Y   +N GMNQYG R    E +  D   LN+SSYPYP N+GR+ +GP
Sbjct:   504 HASPMSSYYASLNSGMNQYGQRETKNETQNGDISSLNNSSYPYPPNMGRVQSGP 557

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=IEA;ISS

GO:0005634 "nucleus" evidence=ISM

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA;ISS

GO:0043565 "sequence-specific DNA binding" evidence=IEA

GO:0009611 "response to wounding" evidence=IEP

GO:0009961 "response to 1-aminocyclopropane-1-carboxylic acid" evidence=IEP

GO:0045893 "positive regulation of transcription, DNA-dependent" evidence=IDA

GO:0009616 "virus induced gene silencing" evidence=RCA

GO:0010050 "vegetative phase change" evidence=RCA

TAIR|locus:2177596 WRKY2 "WRKY DNA-binding protein 2" [Arabidopsis thaliana (taxid:3702)]

 Score = 460 (167.0 bits), Expect = 1.0e-71, Sum P(2) = 1.0e-71
 Identities = 86/113 (76%), Positives = 95/113 (84%)

Query:   185 SKRRKMDALVADVTPVVKPIREPRVVVQTLSEVDILDDGYRWRKYGQKVVRGNPNPRSYY 244
             SKRRK++A  A+++   + IREPRVVVQT S+VDILDDGYRWRKYGQKVV+GNPNPRSYY
Sbjct:   451 SKRRKLEAFAAEMSGSTRAIREPRVVVQTTSDVDILDDGYRWRKYGQKVVKGNPNPRSYY 510

Query:   245 KCTNAGCPVRKHVERASHDPKAVITTYEGKHNHDVPTARTSSHDAAGPSAGNG 297
             KCT  GC VRKHVERASHD K+VITTYEGKHNHDVP AR SSH   G S GNG
Sbjct:   511 KCTAPGCTVRKHVERASHDLKSVITTYEGKHNHDVPAARNSSHGGGGDS-GNG 562

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=IEA;ISS

GO:0005634 "nucleus" evidence=ISM

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA;ISS;IMP

GO:0043565 "sequence-specific DNA binding" evidence=IEA

GO:0009942 "longitudinal axis specification" evidence=IMP

GO:0030010 "establishment of cell polarity" evidence=IMP

TAIR|locus:2014799 WRKY4 "WRKY DNA-binding protein 4" [Arabidopsis thaliana (taxid:3702)]

 Score = 406 (148.0 bits), Expect = 2.0e-67, Sum P(2) = 2.0e-67
 Identities = 72/107 (67%), Positives = 87/107 (81%)

Query:   186 KRRKMDALVADVTPVV--KPIREPRVVVQTLSEVDILDDGYRWRKYGQKVVRGNPNPRSY 243
             KRR  +  +++  P    + + EPR++VQT SEVD+LDDGYRWRKYGQKVV+GNP PRSY
Sbjct:   372 KRRSTEVRISEPAPAASHRTVTEPRIIVQTTSEVDLLDDGYRWRKYGQKVVKGNPYPRSY 431

Query:   244 YKCTNAGCPVRKHVERASHDPKAVITTYEGKHNHDVPTARTSSHDAA 290
             YKCT  GC VRKHVERA+ DPKAV+TTYEGKHNHD+P A++SSH AA
Sbjct:   432 YKCTTPGCGVRKHVERAATDPKAVVTTYEGKHNHDLPAAKSSSHAAA 478

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=IEA;ISS

GO:0005634 "nucleus" evidence=ISM

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA;ISS

GO:0043565 "sequence-specific DNA binding" evidence=IEA

GO:0003677 "DNA binding" evidence=ISS

TAIR|locus:2063835 WRKY3 "WRKY DNA-binding protein 3" [Arabidopsis thaliana (taxid:3702)]

 Score = 668 (240.2 bits), Expect = 1.2e-65, P = 1.2e-65
 Identities = 139/262 (53%), Positives = 165/262 (62%)

Query:    31 EPKQMGQPTAGIQASHSDHKGGGPSMPSDDGYNWRKYGQKHVKGSEFPRSYYKCTHPNCE 90
             E  Q  + T+ I       +      P+DDGYNWRKYGQK VKGS+FPRSYYKCTHP C 
Sbjct:   222 ETSQGQRETSEISVFEHRSQPQNADKPADDGYNWRKYGQKQVKGSDFPRSYYKCTHPACP 281

Query:    91 VKKLFERSHDGQITEIIYKGTHDHPKPQLSRRYSAGNMMS--IQEERPDKVSSL--TCRD 146
             VKK  ERS DGQ+TEIIYKG H+H  PQ  R  + G+  S  I  +     SSL  + RD
Sbjct:   282 VKKKVERSLDGQVTEIIYKGQHNHELPQ-KRGNNNGSCKSSDIANQFQTSNSSLNKSKRD 340

Query:   147 GSMYGQMSHAMETNGTPDLSPVANXXXXXXXXXXXXQYSKRRKMDALVAD-VTPVVKPIR 205
                  Q++   + +   D   V N               KRR  +  V++ V    + + 
Sbjct:   341 QET-SQVTTTEQMSEASDSEEVGNAETSVGERHEDEPDPKRRNTEVRVSEPVASSHRTVT 399

Query:   206 EPRVVVQTLSEVDILDDGYRWRKYGQKVVRGNPNPRSYYKCTNAGCPVRKHVERASHDPK 265
             EPR++VQT SEVD+LDDGYRWRKYGQKVV+GNP PRSYYKCT   C VRKHVERA+ DPK
Sbjct:   400 EPRIIVQTTSEVDLLDDGYRWRKYGQKVVKGNPYPRSYYKCTTPDCGVRKHVERAATDPK 459

Query:   266 AVITTYEGKHNHDVPTARTSSH 287
             AV+TTYEGKHNHDVP ARTSSH
Sbjct:   460 AVVTTYEGKHNHDVPAARTSSH 481

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=IEA;ISS

GO:0005634 "nucleus" evidence=ISM

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA;ISS

GO:0043565 "sequence-specific DNA binding" evidence=IEA

TAIR|locus:2131503 WRKY34 "WRKY DNA-binding protein 34" [Arabidopsis thaliana (taxid:3702)]

 Score = 398 (145.2 bits), Expect = 2.0e-65, Sum P(2) = 2.0e-65
 Identities = 75/109 (68%), Positives = 85/109 (77%)

Query:   185 SKRRKMDALVADVTPVVKPIREPRVVVQTLSEVDILDDGYRWRKYGQKVVRGNPNPRSYY 244
             SKRRK++A   + +   +  REPRVVVQT S++DILDDGYRWRKYGQKVV+GNPNPRSYY
Sbjct:   336 SKRRKLEAYATETSGSTRASREPRVVVQTTSDIDILDDGYRWRKYGQKVVKGNPNPRSYY 395

Query:   245 KCTNAGCPVRKHVERASHDPKAVITTYEGKHNHDVPTARTSSHDAAGPS 293
             KCT  GC V KHVERAS D K+V+TTY GKH H VP AR SSH  AG S
Sbjct:   396 KCTANGCTVTKHVERASDDFKSVLTTYIGKHTHVVPAARNSSHVGAGSS 444

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=IEA;ISS

GO:0005634 "nucleus" evidence=ISM;IDA

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA;ISS

GO:0043565 "sequence-specific DNA binding" evidence=IEA

GO:0009409 "response to cold" evidence=IEP

GO:0009846 "pollen germination" evidence=IMP

TAIR|locus:2057212 WRKY33 "AT2G38470" [Arabidopsis thaliana (taxid:3702)]

 Score = 639 (230.0 bits), Expect = 1.4e-62, P = 1.4e-62
 Identities = 133/252 (52%), Positives = 159/252 (63%)

Query:    52 GGPSMPSDDGYNWRKYGQKHVKGSEFPRSYYKCTHPNCEVKKLFERSHDGQITEIIYKGT 111
             G      +DGYNWRKYGQK VKGSE PRSYYKCT PNC  KK  ERS +GQITEI+YKG+
Sbjct:   177 GREQRKGEDGYNWRKYGQKQVKGSENPRSYYKCTFPNCPTKKKVERSLEGQITEIVYKGS 236

Query:   112 HDHPKPQLSRRYSAGNMM--------SIQEER------PDKVSSLTCRDG-SMYGQMSHA 156
             H+HPKPQ +RR S+ +          S+   R      P+  +S    D   M  + +  
Sbjct:   237 HNHPKPQSTRRSSSSSSTFHSAVYNASLDHNRQASSDQPNSNNSFHQSDSFGMQQEDNTT 296

Query:   157 METNGTPDLSPVANXXXXXXXXXXXXQYSKRRKMDALVADVTPV-VKPIREPRVVVQTLS 215
              ++ G  +    ++              +KR K D           K +REPR+VVQT S
Sbjct:   297 SDSVGDDEFEQGSSIVSRDEEDCGSEPEAKRWKGDNETNGGNGGGSKTVREPRIVVQTTS 356

Query:   216 EVDILDDGYRWRKYGQKVVRGNPNPRSYYKCTNAGCPVRKHVERASHDPKAVITTYEGKH 275
             ++DILDDGYRWRKYGQKVV+GNPNPRSYYKCT  GCPVRKHVERASHD +AVITTYEGKH
Sbjct:   357 DIDILDDGYRWRKYGQKVVKGNPNPRSYYKCTTIGCPVRKHVERASHDMRAVITTYEGKH 416

Query:   276 NHDVPTARTSSH 287
             NHDVP AR S +
Sbjct:   417 NHDVPAARGSGY 428

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS;IDA

GO:0005634 "nucleus" evidence=ISM;IDA

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA;ISS

GO:0042742 "defense response to bacterium" evidence=RCA;IMP

GO:0050832 "defense response to fungus" evidence=RCA;IMP

GO:0010200 "response to chitin" evidence=IEP;RCA

GO:0010120 "camalexin biosynthetic process" evidence=IMP

GO:0006970 "response to osmotic stress" evidence=IEP

GO:0009408 "response to heat" evidence=IEP

GO:0009409 "response to cold" evidence=IEP

GO:0009414 "response to water deprivation" evidence=IEP

GO:0009651 "response to salt stress" evidence=IMP

GO:0005515 "protein binding" evidence=IPI

GO:0034605 "cellular response to heat" evidence=IMP

GO:0070370 "cellular heat acclimation" evidence=IMP

GO:0010508 "positive regulation of autophagy" evidence=IMP

GO:0000165 "MAPK cascade" evidence=RCA

GO:0002679 "respiratory burst involved in defense response" evidence=RCA

GO:0006612 "protein targeting to membrane" evidence=RCA

GO:0006944 "cellular membrane fusion" evidence=RCA

GO:0009595 "detection of biotic stimulus" evidence=RCA

GO:0009697 "salicylic acid biosynthetic process" evidence=RCA

GO:0009862 "systemic acquired resistance, salicylic acid mediated signaling pathway" evidence=RCA

GO:0009863 "salicylic acid mediated signaling pathway" evidence=RCA

GO:0009867 "jasmonic acid mediated signaling pathway" evidence=RCA

GO:0010310 "regulation of hydrogen peroxide metabolic process" evidence=RCA

GO:0010363 "regulation of plant-type hypersensitive response" evidence=RCA

GO:0031348 "negative regulation of defense response" evidence=RCA

GO:0035556 "intracellular signal transduction" evidence=RCA

GO:0043069 "negative regulation of programmed cell death" evidence=RCA

GO:0043900 "regulation of multi-organism process" evidence=RCA

TAIR|locus:2169354 WRKY26 "WRKY DNA-binding protein 26" [Arabidopsis thaliana (taxid:3702)]

 Score = 365 (133.5 bits), Expect = 1.6e-59, Sum P(2) = 1.6e-59
 Identities = 64/80 (80%), Positives = 71/80 (88%)

Query:   204 IREPRVVVQTLSEVDILDDGYRWRKYGQKVVRGNPNPRSYYKCTNAGCPVRKHVERASHD 263
             ++EPRVVVQT S++DILDDGYRWRKYGQKVV+GNPNPRSYYKCT  GC VRKHVERA  D
Sbjct:   217 VKEPRVVVQTTSDIDILDDGYRWRKYGQKVVKGNPNPRSYYKCTFTGCFVRKHVERAFQD 276

Query:   264 PKAVITTYEGKHNHDVPTAR 283
             PK+VITTYEGKH H +PT R
Sbjct:   277 PKSVITTYEGKHKHQIPTPR 296

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=IEA;ISS

GO:0005634 "nucleus" evidence=ISM

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA;ISS

GO:0043565 "sequence-specific DNA binding" evidence=IEA

GO:0034605 "cellular response to heat" evidence=IMP

GO:0070370 "cellular heat acclimation" evidence=IMP

TAIR|locus:2045049 ZAP1 "zinc-dependent activator protein-1" [Arabidopsis thaliana (taxid:3702)]

 Score = 336 (123.3 bits), Expect = 8.8e-57, Sum P(2) = 8.8e-57
 Identities = 58/104 (55%), Positives = 81/104 (77%)

Query:   185 SKRRKMDALVADVTPVVKPIREPRVVVQTLSEVDILDDGYRWRKYGQKVVRGNPNPRSYY 244
             +KRRK    + +++PV +   + R+VV T +  DI++DGYRWRKYGQK V+G+P PRSYY
Sbjct:   272 AKRRKKGGNI-ELSPVERSTNDSRIVVHTQTLFDIVNDGYRWRKYGQKSVKGSPYPRSYY 330

Query:   245 KCTNAGCPVRKHVERASHDPKAVITTYEGKHNHDVPTARTSSHD 288
             +C++ GCPV+KHVER+SHD K +ITTYEGKH+HD+P  R  +H+
Sbjct:   331 RCSSPGCPVKKHVERSSHDTKLLITTYEGKHDHDMPPGRVVTHN 374

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=IEA;ISS;IDA

GO:0005634 "nucleus" evidence=ISM

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA;ISS

GO:0043565 "sequence-specific DNA binding" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IDA

GO:0009863 "salicylic acid mediated signaling pathway" evidence=IEP

GO:0045893 "positive regulation of transcription, DNA-dependent" evidence=IDA

TAIR|locus:2060805 WRKY25 "WRKY DNA-binding protein 25" [Arabidopsis thaliana (taxid:3702)]

 Score = 565 (203.9 bits), Expect = 9.9e-55, P = 9.9e-55
 Identities = 114/231 (49%), Positives = 152/231 (65%)

Query:    55 SMPSDDGYNWRKYGQKHVKGSEFPRSYYKCTHPNCEVKKLFERSHDGQITEIIYKGTHDH 114
             S  S+DGY WRKYGQK VK SE PRSY+KCT+P+C  KK+ E + DGQITEIIYKG H+H
Sbjct:   162 SRNSNDGYGWRKYGQKQVKKSENPRSYFKCTYPDCVSKKIVETASDGQITEIIYKGGHNH 221

Query:   115 PKPQLSRRYSAGNM-MSIQEERPDKVSSLTCRDGSMYGQMSHAMETNGTPDLSPVANXXX 173
             PKP+ ++R S  ++  S+   R    +S+       + Q  ++  +    DL   +    
Sbjct:   222 PKPEFTKRPSQSSLPSSVNGRRLFNPASVVSEP---HDQSENSSISFDYSDLEQKSFKSE 278

Query:   174 XXXXXXXXXQYS-KRRKMDALVADVT-PVVKPIREPRVVVQTLSEVDILDDGYRWRKYGQ 231
                      Q   KR K +     ++  V K ++EPRVVVQT+S++D+L DG+RWRKYGQ
Sbjct:   279 YGEIDEEEEQPEMKRMKREGEDEGMSIEVSKGVKEPRVVVQTISDIDVLIDGFRWRKYGQ 338

Query:   232 KVVRGNPNPRSYYKCTNAGCPVRKHVERASHDPKAVITTYEGKHNHDVPTA 282
             KVV+GN NPRSYYKCT  GC V+K VER++ D +AV+TTYEG+HNHD+PTA
Sbjct:   339 KVVKGNTNPRSYYKCTFQGCGVKKQVERSAADERAVLTTYEGRHNHDIPTA 389

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=IEA;ISS

GO:0005634 "nucleus" evidence=ISM;IDA

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA;ISS

GO:0043565 "sequence-specific DNA binding" evidence=IEA

GO:0005515 "protein binding" evidence=IPI

GO:0006970 "response to osmotic stress" evidence=IEP

GO:0009409 "response to cold" evidence=IEP

GO:0009651 "response to salt stress" evidence=IMP

GO:0034605 "cellular response to heat" evidence=IMP

GO:0070370 "cellular heat acclimation" evidence=IMP

GO:0002237 "response to molecule of bacterial origin" evidence=RCA

GO:0006612 "protein targeting to membrane" evidence=RCA

GO:0006944 "cellular membrane fusion" evidence=RCA

GO:0009625 "response to insect" evidence=RCA

GO:0009862 "systemic acquired resistance, salicylic acid mediated signaling pathway" evidence=RCA

GO:0010286 "heat acclimation" evidence=RCA

GO:0010363 "regulation of plant-type hypersensitive response" evidence=RCA

GO:0031348 "negative regulation of defense response" evidence=RCA

GO:0043069 "negative regulation of programmed cell death" evidence=RCA

GO:0046777 "protein autophosphorylation" evidence=RCA

TAIR|locus:2049852 TTG2 "TRANSPARENT TESTA GLABRA 2" [Arabidopsis thaliana (taxid:3702)]

 Score = 270 (100.1 bits), Expect = 6.6e-50, Sum P(3) = 6.6e-50
 Identities = 56/97 (57%), Positives = 67/97 (69%)

Query:    58 SDDGYNWRKYGQKHVKGSEFPRSYYKCTHPNCEVKKLFERSHDGQITEIIYKGTHDHPKP 117
             S DGYNWRKYGQK VKGSE PRSYYKCTHP C VKK  ERS +GQ++EI+Y+G H+H KP
Sbjct:   164 SVDGYNWRKYGQKQVKGSECPRSYYKCTHPKCPVKKKVERSVEGQVSEIVYQGEHNHSKP 223

Query:   118 Q--LSRRYSAGNMMSIQEERPDKVSSLTCRDGSMYGQ 152
                L RR S+      Q+  P  ++S    +GSM GQ
Sbjct:   224 SCPLPRRASSSISSGFQKP-PKSIAS----EGSM-GQ 254

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=IEA;ISS

GO:0005634 "nucleus" evidence=ISM

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA;ISS

GO:0043565 "sequence-specific DNA binding" evidence=IEA

GO:0010214 "seed coat development" evidence=IMP

GO:0009957 "epidermal cell fate specification" evidence=RCA;IMP

GO:0001708 "cell fate specification" evidence=RCA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q93WV0	WRK20_ARATH	No assigned EC number	0.5748	0.9432	0.6858	yes	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	405
pfam03106	60	pfam03106, WRKY, WRKY DNA -binding domain	1e-36
smart00774	59	smart00774, WRKY, DNA binding domain	2e-34
pfam03106	60	pfam03106, WRKY, WRKY DNA -binding domain	3e-34
smart00774	59	smart00774, WRKY, DNA binding domain	6e-29

>gnl|CDD|145969 pfam03106, WRKY, WRKY DNA -binding domain

 Score =  127 bits (322), Expect = 1e-36
 Identities = 41/59 (69%), Positives = 49/59 (83%)

Query: 220 LDDGYRWRKYGQKVVRGNPNPRSYYKCTNAGCPVRKHVERASHDPKAVITTYEGKHNHD 278
           LDDGY WRKYGQK V+G+P PRSYY+CT+ GCPV+K VER+S DP+ V  TYEG+HNH 
Sbjct: 1   LDDGYNWRKYGQKPVKGSPFPRSYYRCTSPGCPVKKQVERSSDDPQIVEITYEGEHNHP 59

Length = 60

>gnl|CDD|214815 smart00774, WRKY, DNA binding domain

 Score =  121 bits (306), Expect = 2e-34
 Identities = 37/59 (62%), Positives = 46/59 (77%), Gaps = 1/59 (1%)

Query: 220 LDDGYRWRKYGQKVVRGNPNPRSYYKCTNA-GCPVRKHVERASHDPKAVITTYEGKHNH 277
           LDDGY+WRKYGQKV++G+P PRSYY+CT   GCP +K V+R+  DP  V  TYEG+H H
Sbjct: 1   LDDGYQWRKYGQKVIKGSPYPRSYYRCTYTQGCPAKKQVQRSDDDPSVVEVTYEGEHTH 59

The WRKY domain is a DNA binding domain found in one or two copies in a superfamily of plant transcription factors. These transcription factors are involved in the regulation of various physiological programs that are unique to plants, including pathogen defense, senescence and trichome development. The domain is a 60 amino acid region that is defined by the conserved amino acid sequence WRKYGQK at its N-terminal end, together with a novel zinc-finger-like motif. It binds specifically to the DNA sequence motif (T)(T)TGAC(C/T), which is known as the W box. The invariant TGAC core is essential for function and WRKY binding. Length = 59

>gnl|CDD|145969 pfam03106, WRKY, WRKY DNA -binding domain

 Score =  121 bits (305), Expect = 3e-34
 Identities = 43/60 (71%), Positives = 46/60 (76%), Gaps = 1/60 (1%)

Query: 58  SDDGYNWRKYGQKHVKGSEFPRSYYKCTHPNCEVKKLFERSH-DGQITEIIYKGTHDHPK 116
            DDGYNWRKYGQK VKGS FPRSYY+CT P C VKK  ERS  D QI EI Y+G H+HPK
Sbjct: 1   LDDGYNWRKYGQKPVKGSPFPRSYYRCTSPGCPVKKQVERSSDDPQIVEITYEGEHNHPK 60

Length = 60

>gnl|CDD|214815 smart00774, WRKY, DNA binding domain

 Score =  106 bits (268), Expect = 6e-29
 Identities = 32/58 (55%), Positives = 40/58 (68%), Gaps = 2/58 (3%)

Query: 59  DDGYNWRKYGQKHVKGSEFPRSYYKCTH-PNCEVKKLFERS-HDGQITEIIYKGTHDH 114
           DDGY WRKYGQK +KGS +PRSYY+CT+   C  KK  +RS  D  + E+ Y+G H H
Sbjct: 2   DDGYQWRKYGQKVIKGSPYPRSYYRCTYTQGCPAKKQVQRSDDDPSVVEVTYEGEHTH 59

The WRKY domain is a DNA binding domain found in one or two copies in a superfamily of plant transcription factors. These transcription factors are involved in the regulation of various physiological programs that are unique to plants, including pathogen defense, senescence and trichome development. The domain is a 60 amino acid region that is defined by the conserved amino acid sequence WRKYGQK at its N-terminal end, together with a novel zinc-finger-like motif. It binds specifically to the DNA sequence motif (T)(T)TGAC(C/T), which is known as the W box. The invariant TGAC core is essential for function and WRKY binding. Length = 59

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	405
PF03106	60	WRKY: WRKY DNA -binding domain; InterPro: IPR00365	99.96
smart00774	59	WRKY DNA binding domain. The WRKY domain is a DNA	99.96
PF03106	60	WRKY: WRKY DNA -binding domain; InterPro: IPR00365	99.96
smart00774	59	WRKY DNA binding domain. The WRKY domain is a DNA	99.95
PF04500	62	FLYWCH: FLYWCH zinc finger domain; InterPro: IPR00	91.14
PF03101	91	FAR1: FAR1 DNA-binding domain; InterPro: IPR004330	87.86
PF04500	62	FLYWCH: FLYWCH zinc finger domain; InterPro: IPR00	86.86

>PF03106 WRKY: WRKY DNA -binding domain; InterPro: IPR003657 The WRKY domain is a 60 amino acid region that is defined by the conserved amino acid sequence WRKYGQK at its N-terminal end, together with a novel zinc-finger- like motif

Probab=99.96  E-value=3.8e-31  Score=205.12  Aligned_cols=59  Identities=66%  Similarity=1.367  Sum_probs=52.6

Q ss_pred             CCccchhhhcCCcccCCCCCCccccccCCCCCCcccchhhccCCCCeEEEEEecccCCC
Q 015499          220 LDDGYRWRKYGQKVVRGNPNPRSYYKCTNAGCPVRKHVERASHDPKAVITTYEGKHNHD  278 (405)
Q Consensus       220 ~~DGy~WRKYGQK~ikgn~~pRsYyrCt~~gC~a~K~Vqr~~~D~~~~~~tY~G~HnH~  278 (405)
                      ++|||+|||||||.|+|+++||+||||+..+|+|+|+|||+.+|+.+|+|||+|+|||+
T Consensus         1 ~~Dgy~WRKYGqK~i~g~~~pRsYYrCt~~~C~akK~Vqr~~~d~~~~~vtY~G~H~h~   59 (60)
T PF03106_consen    1 LDDGYRWRKYGQKNIKGSPYPRSYYRCTHPGCPAKKQVQRSADDPNIVIVTYEGEHNHP   59 (60)
T ss_dssp             --SSS-EEEEEEEEETTTTCEEEEEEEECTTEEEEEEEEEETTCCCEEEEEEES--SS-
T ss_pred             CCCCCchhhccCcccCCCceeeEeeeccccChhheeeEEEecCCCCEEEEEEeeeeCCC
Confidence            58999999999999999999999999999999999999999999999999999999996

The WRKY domain is found in one or two copies in a superfamily of plant transcription factors involved in the regulation of various physiological programs that are unique to plants, including pathogen defence, senescence, trichome development and the biosynthesis of secondary metabolites. The WRKY domain binds specifically to the DNA sequence motif (T)(T)TGAC(C/T), which is known as the W box. The invariant TGAC core of the W box is essential for function and WRKY binding []. Some proteins known to contain a WRKY domain include Arabidopsis thaliana ZAP1 (Zinc-dependent Activator Protein-1) and AtWRKY44/TTG2, a protein involved in trichome development and anthocyanin pigmentation; and wild oat ABF1-2, two proteins involved in the gibberelic acid-induced expression of the alpha-Amy2 gene. Structural studies indicate that this domain is a four-stranded beta-sheet with a zinc binding pocket, forming a novel zinc and DNA binding structure []. The WRKYGQK residues correspond to the most N-terminal beta-strand, which enables extensive hydrophobic interactions, contributing to the structural stability of the beta-sheet.; GO: 0003700 sequence-specific DNA binding transcription factor activity, 0043565 sequence-specific DNA binding, 0006355 regulation of transcription, DNA-dependent; PDB: 2AYD_A 1WJ2_A 2LEX_A.

>smart00774 WRKY DNA binding domain

Probab=99.96  E-value=5e-30  Score=198.43  Aligned_cols=58  Identities=64%  Similarity=1.321  Sum_probs=56.5

Q ss_pred             CCccchhhhcCCcccCCCCCCccccccCC-CCCCcccchhhccCCCCeEEEEEecccCC
Q 015499          220 LDDGYRWRKYGQKVVRGNPNPRSYYKCTN-AGCPVRKHVERASHDPKAVITTYEGKHNH  277 (405)
Q Consensus       220 ~~DGy~WRKYGQK~ikgn~~pRsYyrCt~-~gC~a~K~Vqr~~~D~~~~~~tY~G~HnH  277 (405)
                      ++|||+|||||||.|+|+++||+||||+. +||+|+|+|||+.+|+.+++|||+|+|||
T Consensus         1 ~~DGy~WRKYGQK~ikgs~~pRsYYrCt~~~~C~a~K~Vq~~~~d~~~~~vtY~g~H~h   59 (59)
T smart00774        1 LDDGYQWRKYGQKVIKGSPFPRSYYRCTYSQGCPAKKQVQRSDDDPSVVEVTYEGEHTH   59 (59)
T ss_pred             CCCcccccccCcEecCCCcCcceEEeccccCCCCCcccEEEECCCCCEEEEEEeeEeCC
Confidence            48999999999999999999999999998 99999999999999999999999999998

The WRKY domain is a DNA binding domain found in one or two copies in a superfamily of plant transcription factors. These transcription factors are involved in the regulation of various physiological programs that are unique to plants, including pathogen defense, senescence and trichome development. The domain is a 60 amino acid region that is defined by the conserved amino acid sequence WRKYGQK at its N-terminal end, together with a novel zinc-finger-like motif. It binds specifically to the DNA sequence motif (T)(T)TGAC(C/T), which is known as the W box. The invariant TGAC core is essential for function and WRKY binding.

>PF03106 WRKY: WRKY DNA -binding domain; InterPro: IPR003657 The WRKY domain is a 60 amino acid region that is defined by the conserved amino acid sequence WRKYGQK at its N-terminal end, together with a novel zinc-finger- like motif

Probab=99.96  E-value=3.8e-30  Score=199.54  Aligned_cols=59  Identities=61%  Similarity=1.230  Sum_probs=50.8

Q ss_pred             CCCCccccccCcccCCCCCCCCCccccCCCccccceeEEecc-CCceEEEEEcCCCCCCC
Q 015499           58 SDDGYNWRKYGQKHVKGSEFPRSYYKCTHPNCEVKKLFERSH-DGQITEIIYKGTHDHPK  116 (405)
Q Consensus        58 ~~DGy~WRKYGQK~ikgs~~pRsYYrCt~~~C~akK~ve~~~-dg~~~~i~Y~G~HnH~~  116 (405)
                      .+|||+|||||||.|+|+++||+||||++.+|+|+|+|||+. |+.++.|+|+|+|||++
T Consensus         1 ~~Dgy~WRKYGqK~i~g~~~pRsYYrCt~~~C~akK~Vqr~~~d~~~~~vtY~G~H~h~k   60 (60)
T PF03106_consen    1 LDDGYRWRKYGQKNIKGSPYPRSYYRCTHPGCPAKKQVQRSADDPNIVIVTYEGEHNHPK   60 (60)
T ss_dssp             --SSS-EEEEEEEEETTTTCEEEEEEEECTTEEEEEEEEEETTCCCEEEEEEES--SS--
T ss_pred             CCCCCchhhccCcccCCCceeeEeeeccccChhheeeEEEecCCCCEEEEEEeeeeCCCC
Confidence            489999999999999999999999999999999999999986 88899999999999985

The WRKY domain is found in one or two copies in a superfamily of plant transcription factors involved in the regulation of various physiological programs that are unique to plants, including pathogen defence, senescence, trichome development and the biosynthesis of secondary metabolites. The WRKY domain binds specifically to the DNA sequence motif (T)(T)TGAC(C/T), which is known as the W box. The invariant TGAC core of the W box is essential for function and WRKY binding []. Some proteins known to contain a WRKY domain include Arabidopsis thaliana ZAP1 (Zinc-dependent Activator Protein-1) and AtWRKY44/TTG2, a protein involved in trichome development and anthocyanin pigmentation; and wild oat ABF1-2, two proteins involved in the gibberelic acid-induced expression of the alpha-Amy2 gene. Structural studies indicate that this domain is a four-stranded beta-sheet with a zinc binding pocket, forming a novel zinc and DNA binding structure []. The WRKYGQK residues correspond to the most N-terminal beta-strand, which enables extensive hydrophobic interactions, contributing to the structural stability of the beta-sheet.; GO: 0003700 sequence-specific DNA binding transcription factor activity, 0043565 sequence-specific DNA binding, 0006355 regulation of transcription, DNA-dependent; PDB: 2AYD_A 1WJ2_A 2LEX_A.

>smart00774 WRKY DNA binding domain

Probab=99.95  E-value=4e-29  Score=193.39  Aligned_cols=57  Identities=58%  Similarity=1.134  Sum_probs=54.8

Q ss_pred             CCCCccccccCcccCCCCCCCCCccccCC-CccccceeEEecc-CCceEEEEEcCCCCC
Q 015499           58 SDDGYNWRKYGQKHVKGSEFPRSYYKCTH-PNCEVKKLFERSH-DGQITEIIYKGTHDH  114 (405)
Q Consensus        58 ~~DGy~WRKYGQK~ikgs~~pRsYYrCt~-~~C~akK~ve~~~-dg~~~~i~Y~G~HnH  114 (405)
                      .+|||+|||||||.|+|+++||+|||||+ ++|+|+|+||++. |+++++|+|+|+|||
T Consensus         1 ~~DGy~WRKYGQK~ikgs~~pRsYYrCt~~~~C~a~K~Vq~~~~d~~~~~vtY~g~H~h   59 (59)
T smart00774        1 LDDGYQWRKYGQKVIKGSPFPRSYYRCTYSQGCPAKKQVQRSDDDPSVVEVTYEGEHTH   59 (59)
T ss_pred             CCCcccccccCcEecCCCcCcceEEeccccCCCCCcccEEEECCCCCEEEEEEeeEeCC
Confidence            47999999999999999999999999999 8999999999985 899999999999998

The WRKY domain is a DNA binding domain found in one or two copies in a superfamily of plant transcription factors. These transcription factors are involved in the regulation of various physiological programs that are unique to plants, including pathogen defense, senescence and trichome development. The domain is a 60 amino acid region that is defined by the conserved amino acid sequence WRKYGQK at its N-terminal end, together with a novel zinc-finger-like motif. It binds specifically to the DNA sequence motif (T)(T)TGAC(C/T), which is known as the W box. The invariant TGAC core is essential for function and WRKY binding.

>PF04500 FLYWCH: FLYWCH zinc finger domain; InterPro: IPR007588 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule

Probab=91.14  E-value=0.1  Score=38.64  Aligned_cols=49  Identities=22%  Similarity=0.565  Sum_probs=24.7

Q ss_pred             CCCCCccccccCcccCCCCCCCCCccccCCC---ccccceeEEeccCCceEEEEEcCCCCC
Q 015499           57 PSDDGYNWRKYGQKHVKGSEFPRSYYKCTHP---NCEVKKLFERSHDGQITEIIYKGTHDH  114 (405)
Q Consensus        57 ~~~DGy~WRKYGQK~ikgs~~pRsYYrCt~~---~C~akK~ve~~~dg~~~~i~Y~G~HnH  114 (405)
                      ..-|||.-++....      ..+.|++|+..   +|+|+=.+. ..++  ..+...++|||
T Consensus        11 L~~~Gy~y~~~~~~------~~~~~WrC~~~~~~~C~a~~~~~-~~~~--~~~~~~~~HnH   62 (62)
T PF04500_consen   11 LVYDGYRYYFNKRN------DGKTYWRCSRRRSHGCRARLITD-AGDG--RVVRTNGEHNH   62 (62)
T ss_dssp             EEETTEEEEEEEE-------SS-EEEEEGGGTTS----EEEEE---TT--EEEE-S---SS
T ss_pred             EEECCeEEECcCCC------CCcEEEEeCCCCCCCCeEEEEEE-CCCC--EEEECCCccCC
Confidence            35688887776555      45689999875   799977666 2233  33445589999

Some of these domains bind zinc, but many do not; instead binding other metals such as iron, or no metal at all. For example, some family members form salt bridges to stabilise the finger-like folds. They were first identified as a DNA-binding motif in transcription factor TFIIIA from Xenopus laevis (African clawed frog), however they are now recognised to bind DNA, RNA, protein and/or lipid substrates [, , , , ]. Their binding properties depend on the amino acid sequence of the finger domains and of the linker between fingers, as well as on the higher-order structures and the number of fingers. Znf domains are often found in clusters, where fingers can have different binding specificities. There are many superfamilies of Znf motifs, varying in both sequence and structure. They display considerable versatility in binding modes, even between members of the same class (e.g. some bind DNA, others protein), suggesting that Znf motifs are stable scaffolds that have evolved specialised functions. For example, Znf-containing proteins function in gene transcription, translation, mRNA trafficking, cytoskeleton organisation, epithelial development, cell adhesion, protein folding, chromatin remodelling and zinc sensing, to name but a few []. Zinc-binding motifs are stable structures, and they rarely undergo conformational changes upon binding their target. C2H2-type (classical) zinc fingers (Znf) were the first class to be characterised. They contain a short beta hairpin and an alpha helix (beta/beta/alpha structure), where a single zinc atom is held in place by Cys(2)His(2) (C2H2) residues in a tetrahedral array. C2H2 Znf's can be divided into three groups based on the number and pattern of fingers: triple-C2H2 (binds single ligand), multiple-adjacent-C2H2 (binds multiple ligands), and separated paired-C2H2 []. C2H2 Znf's are the most common DNA-binding motifs found in eukaryotic transcription factors, and have also been identified in prokaryotes []. Transcription factors usually contain several Znf's (each with a conserved beta/beta/alpha structure) capable of making multiple contacts along the DNA, where the C2H2 Znf motifs recognise DNA sequences by binding to the major groove of DNA via a short alpha-helix in the Znf, the Znf spanning 3-4 bases of the DNA []. C2H2 Znf's can also bind to RNA and protein targets []. This entry represents a potential FLYWCH Zn-finger domain found in a number of eukaryotic proteins. FLYWCH is a C2H2-type zinc finger characterised by five conserved hydrophobic residues, containing the conserved sequence motif: F/Y-X(n)-L-X(n)-F/Y-X(n)-WXCX(6-12)CX(17-22)HXH where X indicates any amino acid. This domain was first characterised in Drosophila Modifier of mdg4 proteins, Mod(mgd4), putative chromatin modulators involved in higher order chromatin domains. Mod(mdg4) proteins share a common N-terminal BTB/POZ domain, but differ in their C-terminal region, most containing C-terminal FLYWCH zinc finger motifs []. The FLYWCH domain in Mod(mdg4) proteins has a putative role in protein-protein interactions; for example, Mod(mdg4)-67.2 interacts with DNA-binding protein Su(Hw) via its FLYWCH domain. FLYWCH domains have been described in other proteins as well, including suppressor of killer of prune, Su(Kpn), which contains 4 terminal FLYWCH zinc finger motifs in a tandem array and a C-terminal glutathione SH-transferase (GST) domain []. More information about these proteins can be found at Protein of the Month: Zinc Fingers [].; PDB: 2RPR_A.

>PF03101 FAR1: FAR1 DNA-binding domain; InterPro: IPR004330 Phytochrome A is the primary photoreceptor for mediating various far-red light-induced responses in higher plants

Probab=87.86  E-value=0.42  Score=38.53  Aligned_cols=29  Identities=24%  Similarity=0.487  Sum_probs=24.7

Q ss_pred             ccccceeEEeccCCceEEEEEcCCCCCCC
Q 015499           88 NCEVKKLFERSHDGQITEIIYKGTHDHPK  116 (405)
Q Consensus        88 ~C~akK~ve~~~dg~~~~i~Y~G~HnH~~  116 (405)
                      +|+|+=.+.+..+|....+.+..+|||+.
T Consensus        61 gC~a~i~v~~~~~~~w~v~~~~~~HNH~L   89 (91)
T PF03101_consen   61 GCKARINVKRRKDGKWRVTSFVLEHNHPL   89 (91)
T ss_pred             CCCEEEEEEEccCCEEEEEECcCCcCCCC
Confidence            59998888877788877788999999985

It has been found that the proteins governing this response, which include FAR-RED ELONGATED HYPOCOTYL3 (FHY3) and FAR-RED-IMPAIRED RESPONSE1 (FAR1), are a pair of homologous proteins sharing significant sequence homology to mutator-like transposases. These proteins appear to be novel transcription factors, which are essential for activating the expression of FHY1 and FHL (for FHY1-like) and related genes, whose products are required for light-induced phytochrome A nuclear accumulation and subsequent light responses in plants. The FRS (FAR1 Related Sequences) family of proteins share a similar domain structure to mutator-like transposases, including an N-terminal C2H2 zinc finger domain, a central putative core transposase domain, and a C-terminal SWIM motif (named after SWI2/SNF and MuDR transposases). It seems plausible that the FRS family represent transcription factors derived from mutator-like transposases [, ]. This entry represents a domain found in FAR1 and FRS proteins. It contains a WRKY like fold and is therefore most likely a zinc binding DNA-binding domain.

>PF04500 FLYWCH: FLYWCH zinc finger domain; InterPro: IPR007588 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule

Probab=86.86  E-value=0.11  Score=38.54  Aligned_cols=49  Identities=29%  Similarity=0.689  Sum_probs=25.2

Q ss_pred             CCCccchhhhcCCcccCCCCCCccccccCC---CCCCcccchhhccCCCCeEEEEEecccCC
Q 015499          219 ILDDGYRWRKYGQKVVRGNPNPRSYYKCTN---AGCPVRKHVERASHDPKAVITTYEGKHNH  277 (405)
Q Consensus       219 ~~~DGy~WRKYGQK~ikgn~~pRsYyrCt~---~gC~a~K~Vqr~~~D~~~~~~tY~G~HnH  277 (405)
                      ++-|||.-.+....      ....|++|+.   .+|+|+=.+.  . +...+ +...++|||
T Consensus        11 L~~~Gy~y~~~~~~------~~~~~WrC~~~~~~~C~a~~~~~--~-~~~~~-~~~~~~HnH   62 (62)
T PF04500_consen   11 LVYDGYRYYFNKRN------DGKTYWRCSRRRSHGCRARLITD--A-GDGRV-VRTNGEHNH   62 (62)
T ss_dssp             EEETTEEEEEEEE-------SS-EEEEEGGGTTS----EEEEE-----TTEE-EE-S---SS
T ss_pred             EEECCeEEECcCCC------CCcEEEEeCCCCCCCCeEEEEEE--C-CCCEE-EECCCccCC
Confidence            56788887765544      4578999984   3899988877  2 23333 445599998

Some of these domains bind zinc, but many do not; instead binding other metals such as iron, or no metal at all. For example, some family members form salt bridges to stabilise the finger-like folds. They were first identified as a DNA-binding motif in transcription factor TFIIIA from Xenopus laevis (African clawed frog), however they are now recognised to bind DNA, RNA, protein and/or lipid substrates [, , , , ]. Their binding properties depend on the amino acid sequence of the finger domains and of the linker between fingers, as well as on the higher-order structures and the number of fingers. Znf domains are often found in clusters, where fingers can have different binding specificities. There are many superfamilies of Znf motifs, varying in both sequence and structure. They display considerable versatility in binding modes, even between members of the same class (e.g. some bind DNA, others protein), suggesting that Znf motifs are stable scaffolds that have evolved specialised functions. For example, Znf-containing proteins function in gene transcription, translation, mRNA trafficking, cytoskeleton organisation, epithelial development, cell adhesion, protein folding, chromatin remodelling and zinc sensing, to name but a few []. Zinc-binding motifs are stable structures, and they rarely undergo conformational changes upon binding their target. C2H2-type (classical) zinc fingers (Znf) were the first class to be characterised. They contain a short beta hairpin and an alpha helix (beta/beta/alpha structure), where a single zinc atom is held in place by Cys(2)His(2) (C2H2) residues in a tetrahedral array. C2H2 Znf's can be divided into three groups based on the number and pattern of fingers: triple-C2H2 (binds single ligand), multiple-adjacent-C2H2 (binds multiple ligands), and separated paired-C2H2 []. C2H2 Znf's are the most common DNA-binding motifs found in eukaryotic transcription factors, and have also been identified in prokaryotes []. Transcription factors usually contain several Znf's (each with a conserved beta/beta/alpha structure) capable of making multiple contacts along the DNA, where the C2H2 Znf motifs recognise DNA sequences by binding to the major groove of DNA via a short alpha-helix in the Znf, the Znf spanning 3-4 bases of the DNA []. C2H2 Znf's can also bind to RNA and protein targets []. This entry represents a potential FLYWCH Zn-finger domain found in a number of eukaryotic proteins. FLYWCH is a C2H2-type zinc finger characterised by five conserved hydrophobic residues, containing the conserved sequence motif: F/Y-X(n)-L-X(n)-F/Y-X(n)-WXCX(6-12)CX(17-22)HXH where X indicates any amino acid. This domain was first characterised in Drosophila Modifier of mdg4 proteins, Mod(mgd4), putative chromatin modulators involved in higher order chromatin domains. Mod(mdg4) proteins share a common N-terminal BTB/POZ domain, but differ in their C-terminal region, most containing C-terminal FLYWCH zinc finger motifs []. The FLYWCH domain in Mod(mdg4) proteins has a putative role in protein-protein interactions; for example, Mod(mdg4)-67.2 interacts with DNA-binding protein Su(Hw) via its FLYWCH domain. FLYWCH domains have been described in other proteins as well, including suppressor of killer of prune, Su(Kpn), which contains 4 terminal FLYWCH zinc finger motifs in a tandem array and a C-terminal glutathione SH-transferase (GST) domain []. More information about these proteins can be found at Protein of the Month: Zinc Fingers [].; PDB: 2RPR_A.

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	405
1wj2_A	78	Solution Structure Of The C-Terminal Wrky Domain Of		5e-31
2ayd_A	76	Crystal Structure Of The C-Terminal Wrky Domainof A		8e-27

>pdb|1WJ2|A Chain A, Solution Structure Of The C-Terminal Wrky Domain Of Atwrky4 Length = 78

Iteration: 1
 Score =  132 bits (331), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 59/70 (84%), Positives = 64/70 (91%)
Query: 211 VQTLSEVDILDDGYRWRKYGQKVVRGNPNPRSYYKCTNAGCPVRKHVERASHDPKAVITT 270
           VQT SEVD+LDDGYRWRKYGQKVV+GNP PRSYYKCT  GC VRKHVERA+ DPKAV+TT
Sbjct: 8   VQTTSEVDLLDDGYRWRKYGQKVVKGNPYPRSYYKCTTPGCGVRKHVERAATDPKAVVTT 67
Query: 271 YEGKHNHDVP 280
           YEGKHNHD+P
Sbjct: 68  YEGKHNHDLP 77

>pdb|2AYD|A Chain A, Crystal Structure Of The C-Terminal Wrky Domainof Atwrky1, An Sa-Induced And Partially Npr1-Dependent Transcription Factor Length = 76

Iteration: 1
 Score =  117 bits (294), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 50/73 (68%), Positives = 64/73 (87%)
Query: 208 RVVVQTLSEVDILDDGYRWRKYGQKVVRGNPNPRSYYKCTNAGCPVRKHVERASHDPKAV 267
           R+VV T +  DI++DGYRWRKYGQK V+G+P PRSYY+C++ GCPV+KHVER+SHD K +
Sbjct: 2   RIVVHTQTLFDIVNDGYRWRKYGQKSVKGSPYPRSYYRCSSPGCPVKKHVERSSHDTKLL 61
Query: 268 ITTYEGKHNHDVP 280
           ITTYEGKH+HD+P
Sbjct: 62  ITTYEGKHDHDMP 74

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	405
1wj2_A	78	Probable WRKY transcription factor 4; DNA-binding	1e-47
1wj2_A	78	Probable WRKY transcription factor 4; DNA-binding	1e-25
2ayd_A	76	WRKY transcription factor 1; beta strands, zinc fi	8e-46
2ayd_A	76	WRKY transcription factor 1; beta strands, zinc fi	7e-26
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	7e-04

>1wj2_A Probable WRKY transcription factor 4; DNA-binding domain, zinc-binding, structural genomics; NMR {Arabidopsis thaliana} SCOP: g.79.1.1 PDB: 2lex_A* Length = 78

 Score =  156 bits (396), Expect = 1e-47
 Identities = 59/76 (77%), Positives = 64/76 (84%)

Query: 205 REPRVVVQTLSEVDILDDGYRWRKYGQKVVRGNPNPRSYYKCTNAGCPVRKHVERASHDP 264
                 VQT SEVD+LDDGYRWRKYGQKVV+GNP PRSYYKCT  GC VRKHVERA+ DP
Sbjct: 2   SSGSSGVQTTSEVDLLDDGYRWRKYGQKVVKGNPYPRSYYKCTTPGCGVRKHVERAATDP 61

Query: 265 KAVITTYEGKHNHDVP 280
           KAV+TTYEGKHNHD+P
Sbjct: 62  KAVVTTYEGKHNHDLP 77

>1wj2_A Probable WRKY transcription factor 4; DNA-binding domain, zinc-binding, structural genomics; NMR {Arabidopsis thaliana} SCOP: g.79.1.1 PDB: 2lex_A* Length = 78

 Score = 98.3 bits (245), Expect = 1e-25
 Identities = 34/60 (56%), Positives = 41/60 (68%), Gaps = 1/60 (1%)

Query: 59  DDGYNWRKYGQKHVKGSEFPRSYYKCTHPNCEVKKLFERS-HDGQITEIIYKGTHDHPKP 117
           DDGY WRKYGQK VKG+ +PRSYYKCT P C V+K  ER+  D +     Y+G H+H  P
Sbjct: 18  DDGYRWRKYGQKVVKGNPYPRSYYKCTTPGCGVRKHVERAATDPKAVVTTYEGKHNHDLP 77

>2ayd_A WRKY transcription factor 1; beta strands, zinc finger; 1.60A {Arabidopsis thaliana} Length = 76

 Score =  151 bits (383), Expect = 8e-46
 Identities = 50/75 (66%), Positives = 64/75 (85%)

Query: 208 RVVVQTLSEVDILDDGYRWRKYGQKVVRGNPNPRSYYKCTNAGCPVRKHVERASHDPKAV 267
           R+VV T +  DI++DGYRWRKYGQK V+G+P PRSYY+C++ GCPV+KHVER+SHD K +
Sbjct: 2   RIVVHTQTLFDIVNDGYRWRKYGQKSVKGSPYPRSYYRCSSPGCPVKKHVERSSHDTKLL 61

Query: 268 ITTYEGKHNHDVPTA 282
           ITTYEGKH+HD+P  
Sbjct: 62  ITTYEGKHDHDMPPG 76

>2ayd_A WRKY transcription factor 1; beta strands, zinc finger; 1.60A {Arabidopsis thaliana} Length = 76

 Score = 98.7 bits (246), Expect = 7e-26
 Identities = 36/60 (60%), Positives = 43/60 (71%), Gaps = 1/60 (1%)

Query: 59  DDGYNWRKYGQKHVKGSEFPRSYYKCTHPNCEVKKLFERS-HDGQITEIIYKGTHDHPKP 117
           +DGY WRKYGQK VKGS +PRSYY+C+ P C VKK  ERS HD ++    Y+G HDH  P
Sbjct: 15  NDGYRWRKYGQKSVKGSPYPRSYYRCSSPGCPVKKHVERSSHDTKLLITTYEGKHDHDMP 74

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 41.0 bits (95), Expect = 7e-04
 Identities = 36/232 (15%), Positives = 69/232 (29%), Gaps = 48/232 (20%)

Query: 151 GQMSHAMETNGTPDLSPVANDDSVEP-DVDDDDQYSK----RRKMDALVADVTPVVKPIR 205
           G+  +  +     D+  V  D  V+  D  D     K    + ++D ++     V   +R
Sbjct: 12  GEHQYQYK-----DILSVFEDAFVDNFDCKDVQDMPKSILSKEEIDHIIMSKDAVSGTLR 66

Query: 206 -------EPRVVVQTLSEVDILDDGYRW--RKYGQKVVRGNPNPRSYYKCT----NAGCP 252
                  +   +VQ   E ++L   Y++       +  + +   R Y +      N    
Sbjct: 67  LFWTLLSKQEEMVQKFVE-EVLRINYKFLMSPIKTEQRQPSMMTRMYIEQRDRLYNDNQV 125

Query: 253 VRK-HVERASHDPKAVITT--YEGKHNHDVPTARTSSHDAAGPSAG-----NGPCRIISE 304
             K +V R    P   +     E +   +V           G  +G        C     
Sbjct: 126 FAKYNVSR--LQPYLKLRQALLELRPAKNV-----LIDGVLG--SGKTWVALDVCL---S 173

Query: 305 EGEAISLDLGVG-ISSATENRSN---EQPQALHSELAHSHPHASSSSYKIIQ 352
                 +D  +  ++    N      E  Q L  ++  +    S  S  I  
Sbjct: 174 YKVQCKMDFKIFWLNLKNCNSPETVLEMLQKLLYQIDPNWTSRSDHSSNIKL 225

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	405
2ayd_A	76	WRKY transcription factor 1; beta strands, zinc fi	100.0
1wj2_A	78	Probable WRKY transcription factor 4; DNA-binding	100.0
2ayd_A	76	WRKY transcription factor 1; beta strands, zinc fi	99.96
1wj2_A	78	Probable WRKY transcription factor 4; DNA-binding	99.96

>2ayd_A WRKY transcription factor 1; beta strands, zinc finger; 1.60A {Arabidopsis thaliana}

Probab=100.00  E-value=1.4e-35  Score=238.43  Aligned_cols=76  Identities=66%  Similarity=1.271  Sum_probs=73.1

Q ss_pred             CceeeecccccCCCCccchhhhcCCcccCCCCCCccccccCCCCCCcccchhhccCCCCeEEEEEecccCCCCCCC
Q 015499          207 PRVVVQTLSEVDILDDGYRWRKYGQKVVRGNPNPRSYYKCTNAGCPVRKHVERASHDPKAVITTYEGKHNHDVPTA  282 (405)
Q Consensus       207 ~~v~v~t~s~~~~~~DGy~WRKYGQK~ikgn~~pRsYyrCt~~gC~a~K~Vqr~~~D~~~~~~tY~G~HnH~~p~~  282 (405)
                      .||+|++.+++++++|||+|||||||.|||+++||+|||||.+||+|+|+|||+.+|+.+++|||+|+|||+.|..
T Consensus         1 ~r~~v~t~~~~~~~~DGy~WRKYGQK~ikgs~~PRsYYrCt~~gC~a~K~Ver~~~d~~~~~~tY~G~H~H~~p~~   76 (76)
T 2ayd_A            1 SRIVVHTQTLFDIVNDGYRWRKYGQKSVKGSPYPRSYYRCSSPGCPVKKHVERSSHDTKLLITTYEGKHDHDMPPG   76 (76)
T ss_dssp             CEEEEEEECSSSCCCCSSCEEEEEEECCTTCSSCEEEEEECSTTCCCEEEEEECSSSTTEEEEEEESCCSSCCCCC
T ss_pred             CeEEEEecCCCCcCCCCchhhhCcccccCCCCCceeEeEcCCCCCCceeeEEEECCCCCEEEEEEccCcCCCCCCC
Confidence            3789999999999999999999999999999999999999999999999999999999999999999999998863

>1wj2_A Probable WRKY transcription factor 4; DNA-binding domain, zinc-binding, structural genomics; NMR {Arabidopsis thaliana} SCOP: g.79.1.1 PDB: 2lex_A*

Probab=100.00  E-value=4e-35  Score=236.75  Aligned_cols=75  Identities=79%  Similarity=1.317  Sum_probs=69.6

Q ss_pred             CceeeecccccCCCCccchhhhcCCcccCCCCCCccccccCCCCCCcccchhhccCCCCeEEEEEecccCCCCCC
Q 015499          207 PRVVVQTLSEVDILDDGYRWRKYGQKVVRGNPNPRSYYKCTNAGCPVRKHVERASHDPKAVITTYEGKHNHDVPT  281 (405)
Q Consensus       207 ~~v~v~t~s~~~~~~DGy~WRKYGQK~ikgn~~pRsYyrCt~~gC~a~K~Vqr~~~D~~~~~~tY~G~HnH~~p~  281 (405)
                      .+|+++|.+++++++|||+|||||||.|||+++||+|||||.+||+|+|+|||+.+|+.+++|||+|+|||+.|.
T Consensus         4 ~~~~~~t~s~~~~~dDGy~WRKYGQK~ikgs~~PRsYYrCt~~gC~a~K~Ver~~~d~~~~~~tY~G~H~H~~p~   78 (78)
T 1wj2_A            4 GSSGVQTTSEVDLLDDGYRWRKYGQKVVKGNPYPRSYYKCTTPGCGVRKHVERAATDPKAVVTTYEGKHNHDLPA   78 (78)
T ss_dssp             ----CCCCCCCCCCCSSSCBCCCEEECCTTCSSCEEEEEEECSSCEEEEEEEEETTTTSEEEEEEESCCSSCCCC
T ss_pred             ceEEEeccCCCCcCCCCchhhhCcccccCCCcCeeEEeecCcCCCCcEeeEEEEcCCCCEEEEEEeeEcCCCCCC
Confidence            478999999999999999999999999999999999999999999999999999999999999999999999884

>2ayd_A WRKY transcription factor 1; beta strands, zinc finger; 1.60A {Arabidopsis thaliana}

Probab=99.96  E-value=7.4e-31  Score=211.04  Aligned_cols=64  Identities=55%  Similarity=1.029  Sum_probs=59.7

Q ss_pred             CCCCCCCccccccCcccCCCCCCCCCccccCCCccccceeEEecc-CCceEEEEEcCCCCCCCCC
Q 015499           55 SMPSDDGYNWRKYGQKHVKGSEFPRSYYKCTHPNCEVKKLFERSH-DGQITEIIYKGTHDHPKPQ  118 (405)
Q Consensus        55 ~~~~~DGy~WRKYGQK~ikgs~~pRsYYrCt~~~C~akK~ve~~~-dg~~~~i~Y~G~HnH~~p~  118 (405)
                      ....+|||+|||||||.|||++|||+|||||+++|+|+|+|||+. |+++++|+|+|+|||+.|.
T Consensus        11 ~~~~~DGy~WRKYGQK~ikgs~~PRsYYrCt~~gC~a~K~Ver~~~d~~~~~~tY~G~H~H~~p~   75 (76)
T 2ayd_A           11 FDIVNDGYRWRKYGQKSVKGSPYPRSYYRCSSPGCPVKKHVERSSHDTKLLITTYEGKHDHDMPP   75 (76)
T ss_dssp             SSCCCCSSCEEEEEEECCTTCSSCEEEEEECSTTCCCEEEEEECSSSTTEEEEEEESCCSSCCCC
T ss_pred             CCcCCCCchhhhCcccccCCCCCceeEeEcCCCCCCceeeEEEECCCCCEEEEEEccCcCCCCCC
Confidence            345799999999999999999999999999999999999999975 7889999999999999885

>1wj2_A Probable WRKY transcription factor 4; DNA-binding domain, zinc-binding, structural genomics; NMR {Arabidopsis thaliana} SCOP: g.79.1.1 PDB: 2lex_A*

Probab=99.96  E-value=2.8e-30  Score=208.55  Aligned_cols=64  Identities=53%  Similarity=1.001  Sum_probs=59.5

Q ss_pred             CCCCCCCccccccCcccCCCCCCCCCccccCCCccccceeEEec-cCCceEEEEEcCCCCCCCCC
Q 015499           55 SMPSDDGYNWRKYGQKHVKGSEFPRSYYKCTHPNCEVKKLFERS-HDGQITEIIYKGTHDHPKPQ  118 (405)
Q Consensus        55 ~~~~~DGy~WRKYGQK~ikgs~~pRsYYrCt~~~C~akK~ve~~-~dg~~~~i~Y~G~HnH~~p~  118 (405)
                      .-+.+|||+|||||||.|||++|||+|||||+++|+|+|+|||+ .|++++.|+|+|+|||+.|.
T Consensus        14 ~~~~dDGy~WRKYGQK~ikgs~~PRsYYrCt~~gC~a~K~Ver~~~d~~~~~~tY~G~H~H~~p~   78 (78)
T 1wj2_A           14 VDLLDDGYRWRKYGQKVVKGNPYPRSYYKCTTPGCGVRKHVERAATDPKAVVTTYEGKHNHDLPA   78 (78)
T ss_dssp             CCCCCSSSCBCCCEEECCTTCSSCEEEEEEECSSCEEEEEEEEETTTTSEEEEEEESCCSSCCCC
T ss_pred             CCcCCCCchhhhCcccccCCCcCeeEEeecCcCCCCcEeeEEEEcCCCCEEEEEEeeEcCCCCCC
Confidence            34579999999999999999999999999999999999999996 57889999999999999873

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	405
d1wj2a_	71	g.79.1.1 (A:) WRKY DNA-binding protein 4 {Thale cr	5e-36
d1wj2a_	71	g.79.1.1 (A:) WRKY DNA-binding protein 4 {Thale cr	3e-25

>d1wj2a_ g.79.1.1 (A:) WRKY DNA-binding protein 4 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 71

class: Small proteins
fold: WRKY DNA-binding domain
superfamily: WRKY DNA-binding domain
family: WRKY DNA-binding domain
domain: WRKY DNA-binding protein 4
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

 Score =  124 bits (312), Expect = 5e-36
 Identities = 59/70 (84%), Positives = 64/70 (91%)

Query: 211 VQTLSEVDILDDGYRWRKYGQKVVRGNPNPRSYYKCTNAGCPVRKHVERASHDPKAVITT 270
           VQT SEVD+LDDGYRWRKYGQKVV+GNP PRSYYKCT  GC VRKHVERA+ DPKAV+TT
Sbjct: 1   VQTTSEVDLLDDGYRWRKYGQKVVKGNPYPRSYYKCTTPGCGVRKHVERAATDPKAVVTT 60

Query: 271 YEGKHNHDVP 280
           YEGKHNHD+P
Sbjct: 61  YEGKHNHDLP 70

>d1wj2a_ g.79.1.1 (A:) WRKY DNA-binding protein 4 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 71

class: Small proteins
fold: WRKY DNA-binding domain
superfamily: WRKY DNA-binding domain
family: WRKY DNA-binding domain
domain: WRKY DNA-binding protein 4
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

 Score = 95.7 bits (238), Expect = 3e-25
 Identities = 34/62 (54%), Positives = 41/62 (66%), Gaps = 1/62 (1%)

Query: 57  PSDDGYNWRKYGQKHVKGSEFPRSYYKCTHPNCEVKKLFERS-HDGQITEIIYKGTHDHP 115
             DDGY WRKYGQK VKG+ +PRSYYKCT P C V+K  ER+  D +     Y+G H+H 
Sbjct: 9   LLDDGYRWRKYGQKVVKGNPYPRSYYKCTTPGCGVRKHVERAATDPKAVVTTYEGKHNHD 68

Query: 116 KP 117
            P
Sbjct: 69  LP 70

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	405
d1wj2a_	71	WRKY DNA-binding protein 4 {Thale cress (Arabidops	100.0
d1wj2a_	71	WRKY DNA-binding protein 4 {Thale cress (Arabidops	99.96

>d1wj2a_ g.79.1.1 (A:) WRKY DNA-binding protein 4 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Small proteins
fold: WRKY DNA-binding domain
superfamily: WRKY DNA-binding domain
family: WRKY DNA-binding domain
domain: WRKY DNA-binding protein 4
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=100.00  E-value=5e-35  Score=230.34  Aligned_cols=71  Identities=83%  Similarity=1.420  Sum_probs=68.3

Q ss_pred             eecccccCCCCccchhhhcCCcccCCCCCCccccccCCCCCCcccchhhccCCCCeEEEEEecccCCCCCC
Q 015499          211 VQTLSEVDILDDGYRWRKYGQKVVRGNPNPRSYYKCTNAGCPVRKHVERASHDPKAVITTYEGKHNHDVPT  281 (405)
Q Consensus       211 v~t~s~~~~~~DGy~WRKYGQK~ikgn~~pRsYyrCt~~gC~a~K~Vqr~~~D~~~~~~tY~G~HnH~~p~  281 (405)
                      |++.+++++++|||+|||||||.|||+++||+||||+.+||+|+|+|||+.+|+.+++|||+|+|||+.|+
T Consensus         1 v~t~~~~~~~dDGy~WRKYGQK~ikgs~~pRsYYrCt~~~C~a~K~Vqr~~~d~~~~~vtY~G~H~h~~Ps   71 (71)
T d1wj2a_           1 VQTTSEVDLLDDGYRWRKYGQKVVKGNPYPRSYYKCTTPGCGVRKHVERAATDPKAVVTTYEGKHNHDLPA   71 (71)
T ss_dssp             CCCCCCCCCCCSSSCBCCCEEECCTTCSSCEEEEEEECSSCEEEEEEEEETTTTSEEEEEEESCCSSCCCC
T ss_pred             CccccccccCCCCcEecccCceeccCCCCceEEEEccccCCCCcceEEEEcCCCCEEEEEEeeEeCCCCCC
Confidence            56788999999999999999999999999999999999999999999999999999999999999999885

>d1wj2a_ g.79.1.1 (A:) WRKY DNA-binding protein 4 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Small proteins
fold: WRKY DNA-binding domain
superfamily: WRKY DNA-binding domain
family: WRKY DNA-binding domain
domain: WRKY DNA-binding protein 4
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=99.96  E-value=4.7e-31  Score=207.55  Aligned_cols=62  Identities=55%  Similarity=1.052  Sum_probs=58.8

Q ss_pred             CCCCCccccccCcccCCCCCCCCCccccCCCccccceeEEecc-CCceEEEEEcCCCCCCCCC
Q 015499           57 PSDDGYNWRKYGQKHVKGSEFPRSYYKCTHPNCEVKKLFERSH-DGQITEIIYKGTHDHPKPQ  118 (405)
Q Consensus        57 ~~~DGy~WRKYGQK~ikgs~~pRsYYrCt~~~C~akK~ve~~~-dg~~~~i~Y~G~HnH~~p~  118 (405)
                      ..+|||+|||||||.|||++|||+||||++++|+|+|+||++. |+.++.|+|+|+|||+.|.
T Consensus         9 ~~dDGy~WRKYGQK~ikgs~~pRsYYrCt~~~C~a~K~Vqr~~~d~~~~~vtY~G~H~h~~Ps   71 (71)
T d1wj2a_           9 LLDDGYRWRKYGQKVVKGNPYPRSYYKCTTPGCGVRKHVERAATDPKAVVTTYEGKHNHDLPA   71 (71)
T ss_dssp             CCCSSSCBCCCEEECCTTCSSCEEEEEEECSSCEEEEEEEEETTTTSEEEEEEESCCSSCCCC
T ss_pred             cCCCCcEecccCceeccCCCCceEEEEccccCCCCcceEEEEcCCCCEEEEEEeeEeCCCCCC
Confidence            4799999999999999999999999999999999999999975 7899999999999999873